Citrus Sinensis ID: 004437
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 753 | 2.2.26 [Sep-21-2011] | |||||||
| Q42883 | 1048 | Calcium-transporting ATPa | N/A | no | 0.998 | 0.717 | 0.809 | 0.0 | |
| O23087 | 1054 | Calcium-transporting ATPa | yes | no | 0.993 | 0.709 | 0.771 | 0.0 | |
| Q9XES1 | 1061 | Calcium-transporting ATPa | no | no | 0.970 | 0.688 | 0.628 | 0.0 | |
| P92939 | 1061 | Calcium-transporting ATPa | no | no | 0.970 | 0.688 | 0.627 | 0.0 | |
| Q9YGL9 | 1042 | Sarcoplasmic/endoplasmic | yes | no | 0.932 | 0.673 | 0.473 | 1e-171 | |
| Q93084 | 1043 | Sarcoplasmic/endoplasmic | yes | no | 0.924 | 0.667 | 0.480 | 1e-164 | |
| Q7PPA5 | 1018 | Calcium-transporting ATPa | yes | no | 0.930 | 0.688 | 0.465 | 1e-163 | |
| Q0VCY0 | 993 | Sarcoplasmic/endoplasmic | yes | no | 0.932 | 0.706 | 0.473 | 1e-163 | |
| P16615 | 1042 | Sarcoplasmic/endoplasmic | no | no | 0.930 | 0.672 | 0.473 | 1e-162 | |
| Q03669 | 1041 | Sarcoplasmic/endoplasmic | no | no | 0.925 | 0.669 | 0.474 | 1e-162 |
| >sp|Q42883|ECAP_SOLLC Calcium-transporting ATPase, endoplasmic reticulum-type OS=Solanum lycopersicum GN=LCA1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 1252 bits (3239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/752 (80%), Positives = 680/752 (90%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
MEEKPFPAWSW+V+QCLKEY VKL+KGLS+ EV+KRRERYG NEL+KEKGKPLW+LVLEQ
Sbjct: 1 MEEKPFPAWSWSVDQCLKEYQVKLEKGLSTYEVDKRRERYGLNELEKEKGKPLWRLVLEQ 60
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
FDDTLVKILL AAFISF+LAY + ++G+SGFE YVEPLVI+ ILVLNAIVGVWQESNAE
Sbjct: 61 FDDTLVKILLGAAFISFVLAYVNQDETGESGFEAYVEPLVILWILVLNAIVGVWQESNAE 120
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
KALEALK++Q ES KVLRDGYLVPD PA LVPGDIVEL VGDKVPADMRVA LK+S+LR
Sbjct: 121 KALEALKEMQGESAKVLRDGYLVPDFPAKELVPGDIVELRVGDKVPADMRVATLKSSTLR 180
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
VEQSSLTGE+MP+ K T + DDCELQAKENMVFAGTTVVNGSC+CIV+NTGM TEIGK
Sbjct: 181 VEQSSLTGESMPVTKSTDFLATDDCELQAKENMVFAGTTVVNGSCICIVVNTGMCTEIGK 240
Query: 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANV 300
IQ+QIHDAS+EESDTPL+KKLDEFGNRLT AIG+VCLVVW +NY+ FLSW+VVD WP++
Sbjct: 241 IQRQIHDASMEESDTPLKKKLDEFGNRLTFAIGVVCLVVWAINYKYFLSWEVVDDWPSDF 300
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
+FSFEKC YYFKIAVALAVAAIPEGLP+VITTCLALGTRKMAQKNAIVRKL SVETLGCT
Sbjct: 301 RFSFEKCAYYFKIAVALAVAAIPEGLPSVITTCLALGTRKMAQKNAIVRKLQSVETLGCT 360
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMSV+EFFTLGRKTT R+F VEGTTYDPKDGGI++W C MDANL
Sbjct: 361 TVICSDKTGTLTTNQMSVSEFFTLGRKTTACRVFGVEGTTYDPKDGGIMNWNCCKMDANL 420
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
MA+ICA+CNDAGV+CDG LF+ATGLPTEAALKVLVEKMG PD K R KI D Q+ ++Y
Sbjct: 421 LLMAEICAICNDAGVFCDGRLFKATGLPTEAALKVLVEKMGVPDSKARCKIRDAQIVSSY 480
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
LID +TV+LGCC+WW KRSKRVATLEFDR+RKSM VIVREP G N+LLVKG+ ESLLERS
Sbjct: 481 LIDRNTVKLGCCDWWMKRSKRVATLEFDRVRKSMGVIVREPNGSNRLLVKGAFESLLERS 540
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
++VQLADGS VPLDE C QL+L + LEMSSKGLRCLG+AYKD+LGE S YY+ +HPAHKK
Sbjct: 541 TYVQLADGSTVPLDESCRQLLLLKQLEMSSKGLRCLGLAYKDDLGELSGYYAATHPAHKK 600
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDPSCYS+IESDLVFVGVVGLRDPPR V +A++DCR AGI++MVITGDNKSTAEA+CR
Sbjct: 601 LLDPSCYSSIESDLVFVGVVGLRDPPREEVHRAVNDCRRAGIKIMVITGDNKSTAEAVCR 660
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+I+LFS E+L G SFTGKEFMA SS QQIE LS+ GGKVFSRAEPRHKQEIVRMLKEMG
Sbjct: 661 EIQLFSNGENLRGSSFTGKEFMAFSSQQQIEILSQDGGKVFSRAEPRHKQEIVRMLKEMG 720
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
E+VAMTGDGVNDAPALKLADIG+AMGITGTEV
Sbjct: 721 EIVAMTGDGVNDAPALKLADIGIAMGITGTEV 752
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to an endomembrane compartment. Solanum lycopersicum (taxid: 4081) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 8 |
| >sp|O23087|ECA2_ARATH Calcium-transporting ATPase 2, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1187 bits (3070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 580/752 (77%), Positives = 663/752 (88%), Gaps = 4/752 (0%)
Query: 2 EEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQF 61
EEK F AWSW+VEQCLKEY +LDKGL+S +V+ RR++YG+NEL KEKGKPLW LVLEQF
Sbjct: 3 EEKSFSAWSWSVEQCLKEYKTRLDKGLTSEDVQIRRQKYGFNELAKEKGKPLWHLVLEQF 62
Query: 62 DDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEK 121
DDTLVKILL AAFISF+LA+ SGFE +VEP VIVLIL+LNA+VGVWQESNAEK
Sbjct: 63 DDTLVKILLGAAFISFVLAFLGEEHGSGSGFEAFVEPFVIVLILILNAVVGVWQESNAEK 122
Query: 122 ALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRV 181
ALEALK++QCES KVLRDG ++P+LPA LVPGDIVEL VGDKVPADMRV+ LKTS+LRV
Sbjct: 123 ALEALKEMQCESAKVLRDGNVLPNLPARELVPGDIVELNVGDKVPADMRVSGLKTSTLRV 182
Query: 182 EQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKI 241
EQSSLTGEAMP+LKG + V +DDCELQ KENMVFAGTTVVNGSCVCIV + GM+TEIGKI
Sbjct: 183 EQSSLTGEAMPVLKGANLVVMDDCELQGKENMVFAGTTVVNGSCVCIVTSIGMDTEIGKI 242
Query: 242 QKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGW-PANV 300
Q+QIH+ASLEES+TPL+KKLDEFG+RLTTAI +VC++VW++NY+NF+SWDVVDG+ P N+
Sbjct: 243 QRQIHEASLEESETPLKKKLDEFGSRLTTAICIVCVLVWMINYKNFVSWDVVDGYKPVNI 302
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
+FSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT
Sbjct: 303 KFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 362
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMS TEFFTLG KTT +R+F V GTTYDPKDGGIVDW C NMDANL
Sbjct: 363 TVICSDKTGTLTTNQMSATEFFTLGGKTTTTRVFSVSGTTYDPKDGGIVDWGCNNMDANL 422
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
QA+A+IC++CNDAGV+ +G LFRATGLPTEAALKVLVEKMG P+ K I + N+
Sbjct: 423 QAVAEICSICNDAGVFYEGKLFRATGLPTEAALKVLVEKMGIPEKKNSENIEE---VTNF 479
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
+ S+V+L CC+WW KRSK+VATLEFDR+RKSMSVIV EP G N+LLVKG+ ES+LERS
Sbjct: 480 SDNGSSVKLACCDWWNKRSKKVATLEFDRVRKSMSVIVSEPNGQNRLLVKGAAESILERS 539
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
S QLADGS+V LDE +++L +H EM+SKGLRCLG+AYKDELGEFSDY SE HP+HKK
Sbjct: 540 SFAQLADGSLVALDESSREVILKKHSEMTSKGLRCLGLAYKDELGEFSDYSSEEHPSHKK 599
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDPS YS IE++L+FVGVVGLRDPPR V +AI+DCR AGI VMVITGDNKSTAEAIC
Sbjct: 600 LLDPSSYSNIETNLIFVGVVGLRDPPREEVGRAIEDCRDAGIRVMVITGDNKSTAEAICC 659
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+I+LFS NEDL+ SFTGKEFM+L ++++ E LSK GGKVFSRAEPRHKQEIVRMLKEMG
Sbjct: 660 EIRLFSENEDLSQSSFTGKEFMSLPASRRSEILSKSGGKVFSRAEPRHKQEIVRMLKEMG 719
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
E+VAMTGDGVNDAPALKLADIG+AMGITGTEV
Sbjct: 720 EIVAMTGDGVNDAPALKLADIGIAMGITGTEV 751
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to an endomembrane compartment. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9XES1|ECA4_ARATH Calcium-transporting ATPase 4, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA4 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/748 (62%), Positives = 575/748 (76%), Gaps = 17/748 (2%)
Query: 6 FPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTL 65
FPAW V +C +++ V +KGLS+ EV KR + YG NEL+K +G +++L+LEQF+DTL
Sbjct: 24 FPAWGKDVSECEEKFGVSREKGLSTDEVLKRHQIYGLNELEKPEGTSIFKLILEQFNDTL 83
Query: 66 VKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEA 125
V+ILL AA ISF+LA+F + G+ G +VEPLVI LIL++NAIVG+WQE+NAEKALEA
Sbjct: 84 VRILLAAAVISFVLAFFDGDEGGEMGITAFVEPLVIFLILIVNAIVGIWQETNAEKALEA 143
Query: 126 LKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSS 185
LK+IQ + V+RDG V LPA LVPGDIVEL VGDKVPADMRV AL +S+LRVEQ S
Sbjct: 144 LKEIQSQQATVMRDGTKVSSLPAKELVPGDIVELRVGDKVPADMRVVALISSTLRVEQGS 203
Query: 186 LTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQI 245
LTGE+ + K T V ++ ++Q K+ MVFAGTTVVNG+C+C+V +TGMNTEIG++ QI
Sbjct: 204 LTGESEAVSKTTKHVD-ENADIQGKKCMVFAGTTVVNGNCICLVTDTGMNTEIGRVHSQI 262
Query: 246 HDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFE 305
+A+ E DTPL+KKL+EFG LT IGL+C +VW++N + FLSW+ VDGWP N +FSFE
Sbjct: 263 QEAAQHEEDTPLKKKLNEFGEVLTMIIGLICALVWLINVKYFLSWEYVDGWPRNFKFSFE 322
Query: 306 KCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICS 365
KCTYYF+IAVALAVAAIPEGLPAVITTCLALGTRKMAQKNA+VRKLPSVETLGCTTVICS
Sbjct: 323 KCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICS 382
Query: 366 DKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAK 425
DKTGTLTTNQM+V++ +G + R F+VEGT++DP+DG I DWP MDANLQ +AK
Sbjct: 383 DKTGTLTTNQMAVSKLVAMGSRIGTLRSFNVEGTSFDPRDGKIEDWPTGRMDANLQMIAK 442
Query: 426 ICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSS 485
I A+CNDA V F + G+PTEAALKVLVEKMGFP+ G N+ S D +
Sbjct: 443 IAAICNDANVEKSDQQFVSRGMPTEAALKVLVEKMGFPE--GLNEASS---------DGN 491
Query: 486 TVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQL 545
+R CC W++ +R+ATLEFDR RKSM V+V +G LLVKG+VE++LERS+H+QL
Sbjct: 492 VLR--CCRLWSELEQRIATLEFDRDRKSMGVMVDSSSGKKLLLVKGAVENVLERSTHIQL 549
Query: 546 ADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDY-YSESHPAHKKLLDP 604
DGS LD+ L+L +MS LRCLG AY D +F+ Y SE HPAH++LL+P
Sbjct: 550 LDGSTRELDQYSRDLILQSLHDMSLSALRCLGFAYSDVPSDFATYDGSEDHPAHQQLLNP 609
Query: 605 SCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKL 664
S YS+IES+LVFVG VGLRDPPR V +AI DCR AGI VMVITGDNKSTAEAICR+I +
Sbjct: 610 SNYSSIESNLVFVGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKSTAEAICREIGV 669
Query: 665 FSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVA 724
F +ED++ RS TGKEFM + Q L + GG +FSRAEP+HKQEIVR+LKE GEVVA
Sbjct: 670 FEADEDISSRSLTGKEFMDVK--DQKNHLRQTGGLLFSRAEPKHKQEIVRLLKEDGEVVA 727
Query: 725 MTGDGVNDAPALKLADIGVAMGITGTEV 752
MTGDGVNDAPALKLADIGVAMGI+GTEV
Sbjct: 728 MTGDGVNDAPALKLADIGVAMGISGTEV 755
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to an endomembrane compartment. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P92939|ECA1_ARATH Calcium-transporting ATPase 1, endoplasmic reticulum-type OS=Arabidopsis thaliana GN=ECA1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/748 (62%), Positives = 574/748 (76%), Gaps = 17/748 (2%)
Query: 6 FPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTL 65
FPAW+ V +C + + V +KGLSS EV KR + YG NEL+K +G +++L+LEQF+DTL
Sbjct: 24 FPAWAKDVAECEEHFVVSREKGLSSDEVLKRHQIYGLNELEKPEGTSIFKLILEQFNDTL 83
Query: 66 VKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEA 125
V+ILL AA ISF+LA+F + G+ G +VEPLVI LIL++NAIVG+WQE+NAEKALEA
Sbjct: 84 VRILLAAAVISFVLAFFDGDEGGEMGITAFVEPLVIFLILIVNAIVGIWQETNAEKALEA 143
Query: 126 LKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSS 185
LK+IQ + V+RDG V LPA LVPGDIVEL VGDKVPADMRV AL +S+LRVEQ S
Sbjct: 144 LKEIQSQQATVMRDGTKVSSLPAKELVPGDIVELRVGDKVPADMRVVALISSTLRVEQGS 203
Query: 186 LTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQI 245
LTGE+ + K T V ++ ++Q K+ MVFAGTTVVNG+C+C+V +TGMNTEIG++ QI
Sbjct: 204 LTGESEAVSKTTKHVD-ENADIQGKKCMVFAGTTVVNGNCICLVTDTGMNTEIGRVHSQI 262
Query: 246 HDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFE 305
+A+ E DTPL+KKL+EFG LT IGL+C +VW++N + FLSW+ VDGWP N +FSFE
Sbjct: 263 QEAAQHEEDTPLKKKLNEFGEVLTMIIGLICALVWLINVKYFLSWEYVDGWPRNFKFSFE 322
Query: 306 KCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICS 365
KCTYYF+IAVALAVAAIPEGLPAVITTCLALGTRKMAQKNA+VRKLPSVETLGCTTVICS
Sbjct: 323 KCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICS 382
Query: 366 DKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAK 425
DKTGTLTTNQM+V++ +G + R F+VEGT++DP+DG I DWP MDANLQ +AK
Sbjct: 383 DKTGTLTTNQMAVSKLVAMGSRIGTLRSFNVEGTSFDPRDGKIEDWPMGRMDANLQMIAK 442
Query: 426 ICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSS 485
I A+CNDA V F + G+PTEAALKVLVEKMGFP+ G N+ S D
Sbjct: 443 IAAICNDANVEQSDQQFVSRGMPTEAALKVLVEKMGFPE--GLNEASS---------DGD 491
Query: 486 TVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQL 545
+R CC W++ +R+ATLEFDR RKSM V+V +G+ LLVKG+VE++LERS+H+QL
Sbjct: 492 VLR--CCRLWSELEQRIATLEFDRDRKSMGVMVDSSSGNKLLLVKGAVENVLERSTHIQL 549
Query: 546 ADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDY-YSESHPAHKKLLDP 604
DGS LD+ L+L +MS LRCLG AY D +F+ Y SE HPAH++LL+P
Sbjct: 550 LDGSKRELDQYSRDLILQSLRDMSLSALRCLGFAYSDVPSDFATYDGSEDHPAHQQLLNP 609
Query: 605 SCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKL 664
S YS+IES+L+FVG VGLRDPPR V +AI DCR AGI VMVITGDNKSTAEAICR+I +
Sbjct: 610 SNYSSIESNLIFVGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKSTAEAICREIGV 669
Query: 665 FSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVA 724
F +ED++ RS TG EFM + Q L + GG +FSRAEP+HKQEIVR+LKE GEVVA
Sbjct: 670 FEADEDISSRSLTGIEFMDVQ--DQKNHLRQTGGLLFSRAEPKHKQEIVRLLKEDGEVVA 727
Query: 725 MTGDGVNDAPALKLADIGVAMGITGTEV 752
MTGDGVNDAPALKLADIGVAMGI+GTEV
Sbjct: 728 MTGDGVNDAPALKLADIGVAMGISGTEV 755
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the endoplasmic reticulum lumen. Also regulate manganese ion homeostasis by pumping it into endomembrane compartments. Can also transport zinc. Arabidopsis thaliana (taxid: 3702) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q9YGL9|AT2A3_CHICK Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Gallus gallus GN=ATP2A3 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 601 bits (1550), Expect = e-171, Method: Compositional matrix adjust.
Identities = 363/766 (47%), Positives = 483/766 (63%), Gaps = 64/766 (8%)
Query: 8 AWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVK 67
A S V+ L + V GLS +V + RE+YG NEL E+ K LW+LVLEQF+D LV+
Sbjct: 4 AHSVPVQDVLSRFGVAESCGLSPEQVRRNREKYGPNELPAEERKSLWELVLEQFEDLLVR 63
Query: 68 ILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALK 127
ILL+AAF+SFILA+F + + F VEP+VI++IL+ NA+VGVWQE NAE A+EALK
Sbjct: 64 ILLMAAFLSFILAWFEEGEESTTAF---VEPIVIIMILIANAVVGVWQERNAESAIEALK 120
Query: 128 KIQCESGKVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSL 186
+ + E GKV+R D V + A +VPGDIVE+ VGDKVPAD+R+ +++++LRV+QS L
Sbjct: 121 EYEPEMGKVIRADRSGVQRIRARDIVPGDIVEVAVGDKVPADIRIIEIRSTTLRVDQSIL 180
Query: 187 TGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIH 246
TGE+M ++K P+ Q K+NM+F+GT + G V IVI TG+ TEIGKI+ Q+
Sbjct: 181 TGESMSVIKHADPIPDPRAVNQDKKNMLFSGTNIAAGKAVGIVIATGVYTEIGKIRNQMV 240
Query: 247 DASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDG--WPANVQFSF 304
+ E TPL++KLDEF +L+ I LVC+ VW++N +F D V G W F
Sbjct: 241 ET--EPEKTPLQQKLDEFSQQLSKVIFLVCIAVWVINISHFS--DPVHGGSW-------F 289
Query: 305 EKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVIC 364
YYFK +VALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VIC
Sbjct: 290 RGAIYYFKTSVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVIC 349
Query: 365 SDKTGTLTTNQMSVTEFFTL----GRKTTISRIFHVEGTTYDPKDGGIVDWP---CYNMD 417
SDKTGTLTTNQMSV F + G + ++ F + G+TY P+ + D C D
Sbjct: 350 SDKTGTLTTNQMSVCRMFIMEKVEGTQCSLHE-FSITGSTYAPEGQILKDEKPVRCGQYD 408
Query: 418 ANLQAMAKICAVCNDAGV-YCDG-PLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQ 475
L +A ICA+CND+ + Y + ++ G TE AL LVEKM D +K+S +
Sbjct: 409 G-LVELATICALCNDSSLDYNESKKVYEKVGEATETALTCLVEKMNVFDTD-TSKLSKVE 466
Query: 476 LAANYLIDSSTVRLGCCEWWTKR-SKRVATLEFDRIRKSMSVIVREPT--GHN----QLL 528
R C K ++ TLEF R RKSMSV PT GHN ++
Sbjct: 467 ------------RANACNSVIKHLMRKECTLEFSRDRKSMSVYC-TPTGPGHNSAGSKMF 513
Query: 529 VKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLS--RHLEMSSKGLRCLGMAYKDELGE 586
VKG+ ES++ER +HV++ VPL P + +LS R M + LRCL +A D
Sbjct: 514 VKGAPESVIERCTHVRVGTAK-VPLTPPVREKILSQIRDWGMGTDTLRCLALATHD---- 568
Query: 587 FSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMV 646
+ E+ H D + ++ E++L FVG VG+ DPPR V +I+ CR AGI V++
Sbjct: 569 -APVQRETMQLH----DSTTFTHYETNLTFVGCVGMLDPPRKEVTSSIEMCRKAGIRVIM 623
Query: 647 ITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEP 706
ITGDNK TA AICR+I +F+ +ED+ G+++TG+EF LS Q +A + + F+R EP
Sbjct: 624 ITGDNKGTAVAICRRIGIFTESEDVAGKAYTGREFDELSPEAQRQACRE--ARCFARVEP 681
Query: 707 RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
HK IV L+ E+ AMTGDGVNDAPALK A+IG+AMG +GT V
Sbjct: 682 AHKSRIVEYLQSFNEITAMTGDGVNDAPALKKAEIGIAMG-SGTAV 726
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of the calcium. Transports calcium ions from the cytosol into the sarcoplasmic/endoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction. Gallus gallus (taxid: 9031) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q93084|AT2A3_HUMAN Sarcoplasmic/endoplasmic reticulum calcium ATPase 3 OS=Homo sapiens GN=ATP2A3 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 578 bits (1489), Expect = e-164, Method: Compositional matrix adjust.
Identities = 362/754 (48%), Positives = 476/754 (63%), Gaps = 58/754 (7%)
Query: 17 LKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFIS 76
L+ ++V + GLS +V RERYG NEL E+GK LW+LVLEQF+D LV+ILL+AA +S
Sbjct: 13 LRHFSVTAEGGLSPAQVTGARERYGPNELPSEEGKSLWELVLEQFEDLLVRILLLAALVS 72
Query: 77 FILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKV 136
F+LA+F + + F VEPLVI+LILV NAIVGVWQE NAE A+EALK+ + E GKV
Sbjct: 73 FVLAWFEEGEETTTAF---VEPLVIMLILVANAIVGVWQERNAESAIEALKEYEPEMGKV 129
Query: 137 LR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILK 195
+R D V + A +VPGDIVE+ VGDKVPAD+R+ +K+++LRV+QS LTGE++ + K
Sbjct: 130 IRSDRKGVQRIRARDIVPGDIVEVAVGDKVPADLRLIEIKSTTLRVDQSILTGESVSVTK 189
Query: 196 GTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDT 255
T + Q K+NM+F+GT + +G V + + TG++TE+GKI+ Q+ A++E T
Sbjct: 190 HTEAIPDPRAVNQDKKNMLFSGTNITSGKAVGVAVATGLHTELGKIRSQM--AAVEPERT 247
Query: 256 PLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAV 315
PL++KLDEFG +L+ AI ++C+ VW++N +F PA+ YYFKIAV
Sbjct: 248 PLQRKLDEFGRQLSHAISVICVAVWVINIGHFAD-------PAHGGSWLRGAVYYFKIAV 300
Query: 316 ALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQ 375
ALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VICSDKTGTLTTNQ
Sbjct: 301 ALAVAAIPEGLPAVITTCLALGTRRMARKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 360
Query: 376 MSVTEFFTLGRKTTISRIFH---VEGTTYDPKDGGIV--DWP--CYNMDANLQAMAKICA 428
MSV F + S + H + GTTY P +G + D P C D L +A ICA
Sbjct: 361 MSVCRMFVVAEADAGSCLLHEFTISGTTYTP-EGEVRQGDQPVRCGQFDG-LVELATICA 418
Query: 429 VCNDAGV-YCDGP-LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSST 486
+CND+ + Y + ++ G TE AL LVEKM + DT L A ++
Sbjct: 419 LCNDSALDYNEAKGVYEKVGEATETALTCLVEKM---------NVFDTDLQALSRVE--- 466
Query: 487 VRLGCCEWWTKRSKRVA-TLEFDRIRKSMSVIVR----EPTGH-NQLLVKGSVESLLERS 540
R G C K+ R TLEF R RKSMSV PTG +++ VKG+ ES++ER
Sbjct: 467 -RAGACNTVIKQLMRKEFTLEFSRDRKSMSVYCTPTRPHPTGQGSKMFVKGAPESVIERC 525
Query: 541 SHVQLADGSVVPLDEPCWQLMLS--RHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAH 598
S V++ + PL + +L+ R S LRCL +A +D D
Sbjct: 526 SSVRVGSRT-APLTPTSREQILAKIRDWGSGSDTLRCLALATRDAPPRKEDM-------- 576
Query: 599 KKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAI 658
+L D S + E+DL FVG VG+ DPPR V I C AGI V++ITGDNK TA AI
Sbjct: 577 -ELDDCSKFVQYETDLTFVGCVGMLDPPRPEVAACITRCYQAGIRVVMITGDNKGTAVAI 635
Query: 659 CRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKE 718
CR++ +F ED+ G+++TG+EF LS QQ +A + F+R EP HK IV L+
Sbjct: 636 CRRLGIFGDTEDVAGKAYTGREFDDLSPEQQRQAC--RTARCFARVEPAHKSRIVENLQS 693
Query: 719 MGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
E+ AMTGDGVNDAPALK A+IG+AMG +GT V
Sbjct: 694 FNEITAMTGDGVNDAPALKKAEIGIAMG-SGTAV 726
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Transports calcium ions from the cytosol into the sarcoplasmic/endoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q7PPA5|ATC1_ANOGA Calcium-transporting ATPase sarcoplasmic/endoplasmic reticulum type OS=Anopheles gambiae GN=Ca-P60A PE=2 SV=5 | Back alignment and function description |
|---|
Score = 575 bits (1482), Expect = e-163, Method: Compositional matrix adjust.
Identities = 355/762 (46%), Positives = 477/762 (62%), Gaps = 61/762 (8%)
Query: 10 SWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKIL 69
S TV++ L + V ++GLS +V++ +++YG NEL E+GK LWQLVLEQFDD LVKIL
Sbjct: 6 SKTVDEVLSHFRVDPERGLSLDQVKEYQKKYGPNELPAEEGKTLWQLVLEQFDDLLVKIL 65
Query: 70 LVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKI 129
L+AA ISF+LA F + G E +VEP VI+LIL+ NA+VGVWQE NAE A+EALK+
Sbjct: 66 LLAAIISFVLALFEEHE----GVEAFVEPFVILLILIANAVVGVWQERNAESAIEALKEY 121
Query: 130 QCESGKVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTG 188
+ E GKV+R D V + A +VPGD+VE+ VGDK+PAD+R+ + ++++R++QS LTG
Sbjct: 122 EPEMGKVIRGDKSGVQKIRAKEIVPGDVVEVSVGDKIPADIRLIKIYSTTIRIDQSILTG 181
Query: 189 EAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDA 248
E++ ++K T V Q K+N++F+GT V G +VI TG+NT IGKI+ ++ +
Sbjct: 182 ESVSVIKHTDAVPDPRAVNQDKKNILFSGTNVAAGKARGVVIGTGLNTAIGKIRTEMSET 241
Query: 249 SLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCT 308
EE TPL++KLDEFG +L+ I L+C+ VW +N +F PA+ +
Sbjct: 242 --EEIKTPLQQKLDEFGEQLSKVISLICVAVWAINIGHFND-------PAHGGSWIKGAV 292
Query: 309 YYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKT 368
YYFKIAVALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VICSDKT
Sbjct: 293 YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKT 352
Query: 369 GTLTTNQMSVTEFFTL----GRKTTISRIFHVEGTTYDP-----KDGGIVDWPCYNMDAN 419
GTLTTNQMSV+ F G ++ + F + G+TY+P +G + Y
Sbjct: 353 GTLTTNQMSVSRMFIFEKIEGNDSSFTE-FEISGSTYEPIGEVTLNGQRIKAADYE---T 408
Query: 420 LQAMAKICAVCNDAGVYCD--GPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLA 477
L + IC +CND+ + + +F G TE AL VL EK+ +V
Sbjct: 409 LHELGTICIMCNDSAIDFNETKKVFEKVGEATETALIVLAEKLNPFNV------------ 456
Query: 478 ANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHN-----QLLVKGS 532
A +D + + + + K+ TLEF R RKSMS +L KG+
Sbjct: 457 AKQGLDRRSSAICVRQEIETKWKKEFTLEFSRDRKSMSSYCTPLKASKLGNGPKLFCKGA 516
Query: 533 VESLLERSSHVQLADGSVVPLDEPCWQ--LMLSRHLEMSSKGLRCLGMAYKDELGEFSDY 590
E +LER +H ++ + VPL + Q L L+R LRCL +A D
Sbjct: 517 PEGVLERCTHARVGS-TKVPLTQTLKQRILDLTRTYGTGRDTLRCLALATAD-------- 567
Query: 591 YSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGD 650
S P L D + + T E +L FVGVVG+ DPPR V +I CR AGI V+VITGD
Sbjct: 568 -SPMKPDDMDLNDSTKFYTYEVNLTFVGVVGMLDPPRKEVQDSIVRCRAAGIRVIVITGD 626
Query: 651 NKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQ 710
NK+TAEAICR+I +F +ED TG+S++G+EF LS ++Q EA S+ ++FSR EP HK
Sbjct: 627 NKATAEAICRRIGVFGEDEDTTGKSYSGREFDDLSVSEQREACSR--ARLFSRVEPAHKS 684
Query: 711 EIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
+IV L+ M E+ AMTGDGVNDAPALK A+IG+AMG +GT V
Sbjct: 685 KIVEFLQSMNEISAMTGDGVNDAPALKKAEIGIAMG-SGTAV 725
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. Anopheles gambiae (taxid: 7165) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q0VCY0|AT2A1_BOVIN Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 OS=Bos taurus GN=ATP2A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 575 bits (1481), Expect = e-163, Method: Compositional matrix adjust.
Identities = 362/765 (47%), Positives = 486/765 (63%), Gaps = 63/765 (8%)
Query: 8 AWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVK 67
A S T E+CL + V GL+ +V++ E+YG NEL E+GK LW+LVLEQF+D LV+
Sbjct: 4 AHSKTTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVLEQFEDLLVR 63
Query: 68 ILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALK 127
ILL+AA ISF+LA+F + G+ +VEP VI+LIL+ NAIVGVWQE NAE A+EALK
Sbjct: 64 ILLLAACISFVLAWF---EEGEETVTAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 128 KIQCESGKVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSL 186
+ + E GKV R D V + A +VPGDIVE+ VGDKVPAD+R+ +K+++LRV+QS L
Sbjct: 121 EYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILTIKSTTLRVDQSIL 180
Query: 187 TGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIH 246
TGE++ ++K T PV Q K+NM+F+GT + G + IV TG+ TEIGKI+ Q+
Sbjct: 181 TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKAIGIVATTGVGTEIGKIRDQM- 239
Query: 247 DASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDG--WPANVQFSF 304
A+ E+ TPL++KLDEFG +L+ I L+C+ VW++N +F D V G W
Sbjct: 240 -AATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHF--NDPVHGGSW-------I 289
Query: 305 EKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVIC 364
YYFKIAVALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VIC
Sbjct: 290 RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVIC 349
Query: 365 SDKTGTLTTNQMSVTEFFTLGR---KTTISRIFHVEGTTYDPKDGGIV--DWPCYNMDAN 419
SDKTGTLTTNQMSV + F + R + F V G+TY P +G ++ D P + +
Sbjct: 350 SDKTGTLTTNQMSVCKMFIIDRIDGDLCLLNEFSVTGSTYAP-EGEVLKNDKPVRSGQYD 408
Query: 420 -LQAMAKICAVCNDAGVYCDGP--LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQL 476
L +A ICA+CND+ + + ++ G TE AL LVEKM + + RN +S +
Sbjct: 409 GLVELATICALCNDSSLDFNETKGIYEKVGEATETALTTLVEKMNVFNTEVRN-LSKVER 467
Query: 477 AANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIV-----REPTGHNQLLVKG 531
A C + K+ TLEF R RKSMSV R G N++ VKG
Sbjct: 468 AN-----------ACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSRAAVG-NKMFVKG 515
Query: 532 SVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSS--KGLRCLGMAYKDELGEFSD 589
+ E +++R ++V++ + VP+ P + +LS E + LRCL +A +D
Sbjct: 516 APEGVIDRCNYVRVGT-TRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRD------- 567
Query: 590 YYSESHPAHKKLL--DPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVI 647
+ P ++++ D + + E+DL FVGVVG+ DPPR V +I CR AGI V++I
Sbjct: 568 ----TPPKREEMVLDDSTKFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMI 623
Query: 648 TGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPR 707
TGDNK TA AICR+I +F NED+ R++TG+EF L +Q EA + F+R EP
Sbjct: 624 TGDNKGTAIAICRRIGIFGENEDVADRAYTGREFDDLPLAEQREACRR--ACCFARVEPT 681
Query: 708 HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
HK +IV L+ E+ AMTGDGVNDAPALK A+IG+AMG +GT V
Sbjct: 682 HKSKIVEYLQSFDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAV 725
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Contributes to calcium sequestration involved in muscular excitation/contraction. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|P16615|AT2A2_HUMAN Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Homo sapiens GN=ATP2A2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 573 bits (1477), Expect = e-162, Method: Compositional matrix adjust.
Identities = 363/766 (47%), Positives = 486/766 (63%), Gaps = 65/766 (8%)
Query: 8 AWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVK 67
A + TVE+ L + V GLS +V+K +ER+G NEL E+GK L +LV+EQF+D LV+
Sbjct: 4 AHTKTVEEVLGHFGVNESTGLSLEQVKKLKERWGSNELPAEEGKTLLELVIEQFEDLLVR 63
Query: 68 ILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALK 127
ILL+AA ISF+LA+F + G+ +VEP VI+LILV NAIVGVWQE NAE A+EALK
Sbjct: 64 ILLLAACISFVLAWF---EEGEETITAFVEPFVILLILVANAIVGVWQERNAENAIEALK 120
Query: 128 KIQCESGKVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSL 186
+ + E GKV R D V + A +VPGDIVE+ VGDKVPAD+R+ ++K+++LRV+QS L
Sbjct: 121 EYEPEMGKVYRQDRKSVQRIKAKDIVPGDIVEIAVGDKVPADIRLTSIKSTTLRVDQSIL 180
Query: 187 TGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIH 246
TGE++ ++K T PV Q K+NM+F+GT + G + +V+ TG+NTEIGKI+ ++
Sbjct: 181 TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAMGVVVATGVNTEIGKIRDEM- 239
Query: 247 DASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDG--WPANVQFSF 304
+ E+ TPL++KLDEFG +L+ I L+C+ VWI+N +F D V G W
Sbjct: 240 -VATEQERTPLQQKLDEFGEQLSKVISLICIAVWIINIGHFN--DPVHGGSW-------I 289
Query: 305 EKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVIC 364
YYFKIAVALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VIC
Sbjct: 290 RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVIC 349
Query: 365 SDKTGTLTTNQMSVTEFFTLGR---KTTISRIFHVEGTTYDP-----KDGGIVDWPCYNM 416
SDKTGTLTTNQMSV F L R T F + G+TY P KD V+ C+
Sbjct: 350 SDKTGTLTTNQMSVCRMFILDRVEGDTCSLNEFTITGSTYAPIGEVHKDDKPVN--CHQY 407
Query: 417 DANLQAMAKICAVCNDAGV-YCDGP-LFRATGLPTEAALKVLVEKMGFPD--VKGRNKIS 472
D L +A ICA+CND+ + Y + ++ G TE AL LVEKM D +KG +KI
Sbjct: 408 DG-LVELATICALCNDSALDYNEAKGVYEKVGEATETALTCLVEKMNVFDTELKGLSKIE 466
Query: 473 DTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIV--REP--TGHNQLL 528
A N +I + K+ TLEF R RKSMSV +P T +++
Sbjct: 467 RAN-ACNSVIK-------------QLMKKEFTLEFSRDRKSMSVYCTPNKPSRTSMSKMF 512
Query: 529 VKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLS--RHLEMSSKGLRCLGMAYKDELGE 586
VKG+ E +++R +H+++ + VP+ Q ++S R S LRCL +A D
Sbjct: 513 VKGAPEGVIDRCTHIRVG-STKVPMTSGVKQKIMSVIREWGSGSDTLRCLALATHDNPLR 571
Query: 587 FSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMV 646
+ + E D + + E++L FVG VG+ DPPR V ++ CR AGI V++
Sbjct: 572 REEMHLE---------DSANFIKYETNLTFVGCVGMLDPPRIEVASSVKLCRQAGIRVIM 622
Query: 647 ITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEP 706
ITGDNK TA AICR+I +F +ED+T ++FTG+EF L+ + Q +A + F+R EP
Sbjct: 623 ITGDNKGTAVAICRRIGIFGQDEDVTSKAFTGREFDELNPSAQRDAC--LNARCFARVEP 680
Query: 707 RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
HK +IV L+ E+ AMTGDGVNDAPALK A+IG+AMG +GT V
Sbjct: 681 SHKSKIVEFLQSFDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAV 725
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Isoform 2 is involved in the regulation of the contraction/relaxation cycle. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
| >sp|Q03669|AT2A2_CHICK Sarcoplasmic/endoplasmic reticulum calcium ATPase 2 OS=Gallus gallus GN=ATP2A2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 573 bits (1477), Expect = e-162, Method: Compositional matrix adjust.
Identities = 365/770 (47%), Positives = 488/770 (63%), Gaps = 73/770 (9%)
Query: 8 AWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVK 67
A + TVE+ L + V GLS +V+K +E++G NEL E+GK L +LV+EQF+D LV+
Sbjct: 4 AHTKTVEEVLAYFGVNESTGLSLEQVKKLKEKWGSNELPAEEGKTLLELVIEQFEDLLVR 63
Query: 68 ILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALK 127
ILL+AA ISF+LA+F + G+ +VEP VI+LILV NAIVGVWQE NAE A+EALK
Sbjct: 64 ILLLAACISFVLAWF---EEGEETITAFVEPFVILLILVANAIVGVWQERNAENAIEALK 120
Query: 128 KIQCESGKVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSL 186
+ + E GKV R D V + A +VPGDIVE+ VGDKVPAD+R+ ++K+++LRV+QS L
Sbjct: 121 EYEPEMGKVYRQDRKSVQRIKARDIVPGDIVEVAVGDKVPADIRITSIKSTTLRVDQSIL 180
Query: 187 TGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIH 246
TGE++ ++K T PV Q K+NM+F+GT + G + +VI TG+NTEIGKI+ ++
Sbjct: 181 TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAMGVVIATGVNTEIGKIRDEM- 239
Query: 247 DASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDG--WPANVQFSF 304
+ E+ TPL++KLDEFG +L+ I L+C+ VWI+N +F D V G W
Sbjct: 240 -VATEQERTPLQQKLDEFGEQLSKVISLICIAVWIINIGHFN--DPVHGGSW-------I 289
Query: 305 EKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVIC 364
YYFKIAVALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VIC
Sbjct: 290 RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVIC 349
Query: 365 SDKTGTLTTNQMSVTEFFTL----GRKTTISRIFHVEGTTYDP-----KDGGIVDWPCYN 415
SDKTGTLTTNQMSV F L G +++ F V G+TY P KD ++ C
Sbjct: 350 SDKTGTLTTNQMSVCRMFILDKVEGDSCSLNE-FTVTGSTYAPMGEVHKDDKLIK--CSQ 406
Query: 416 MDANLQAMAKICAVCNDAGV-YCDGP-LFRATGLPTEAALKVLVEKMGF--PDVKGRNKI 471
D L +A ICA+CND+ + Y + ++ G TE AL LVEKM D+KG ++I
Sbjct: 407 YDG-LVELATICALCNDSSLDYNEAKGVYEKVGEATETALTCLVEKMNVFDTDLKGLSRI 465
Query: 472 SDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIV--REP--TGHNQL 527
A N +I + K+ TLEF R RKSMSV +P T +++
Sbjct: 466 ERAN-ACNSVIK-------------QLMKKEFTLEFSRDRKSMSVYCTPNKPSRTSMSKM 511
Query: 528 LVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLS--RHLEMSSKGLRCLGMAYKDELG 585
VKG+ E +++R +HV++ + +PL Q ++S R LRCL +A D
Sbjct: 512 FVKGAPEGVIDRCTHVRVGNAK-IPLSSGIKQKIMSVIREWGTGRDTLRCLALATHD--- 567
Query: 586 EFSDYYSESHPAHKK---LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGI 642
+P K+ L D S + E++L FVG VG+ DPPR V +I C+ AGI
Sbjct: 568 ---------NPPRKEEMNLEDSSNFINYETNLTFVGCVGMLDPPRIEVASSIKLCKQAGI 618
Query: 643 EVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS 702
V++ITGDNK TA AICR+I +F +ED++ ++FTG+EF LS Q +A H + F+
Sbjct: 619 RVIMITGDNKGTAVAICRRIGIFVEDEDVSTKAFTGREFDELSLAAQRDAC--HHARCFA 676
Query: 703 RAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
R EP HK +IV L+ E+ AMTGDGVNDAPALK A+IG+AMG +GT V
Sbjct: 677 RVEPSHKSKIVEFLQSFDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAV 725
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to the sarcoplasmic reticulum lumen. Isoform SERCA2A is involved in the regulation of the contraction/relaxation cycle. Gallus gallus (taxid: 9031) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 8 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 753 | ||||||
| 147767786 | 1051 | hypothetical protein VITISV_022077 [Viti | 0.998 | 0.715 | 0.864 | 0.0 | |
| 359489590 | 1051 | PREDICTED: calcium-transporting ATPase, | 0.998 | 0.715 | 0.864 | 0.0 | |
| 356520254 | 1057 | PREDICTED: calcium-transporting ATPase, | 0.998 | 0.711 | 0.834 | 0.0 | |
| 224127987 | 1045 | endoplasmic reticulum [ER]-type calcium | 0.990 | 0.713 | 0.855 | 0.0 | |
| 356559943 | 1057 | PREDICTED: calcium-transporting ATPase, | 0.998 | 0.711 | 0.838 | 0.0 | |
| 17342714 | 1047 | type IIA calcium ATPase [Medicago trunca | 0.994 | 0.715 | 0.827 | 0.0 | |
| 357514479 | 762 | Calcium-transporting ATPase, endoplasmic | 0.986 | 0.975 | 0.821 | 0.0 | |
| 350538145 | 1048 | calcium-transporting ATPase, endoplasmic | 0.998 | 0.717 | 0.809 | 0.0 | |
| 116248601 | 892 | endomembrane Ca2+ ATPase 2 [Arabidopsis | 0.993 | 0.838 | 0.769 | 0.0 | |
| 15236991 | 1054 | Ca2+-transporting ATPase [Arabidopsis th | 0.993 | 0.709 | 0.771 | 0.0 |
| >gi|147767786|emb|CAN66975.1| hypothetical protein VITISV_022077 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1338 bits (3462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/752 (86%), Positives = 704/752 (93%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
MEE PFPAWSW+VEQCLKEYNV++DKGLSS EVEKRRERYGWNEL KEKGKPLW+LVLEQ
Sbjct: 1 MEENPFPAWSWSVEQCLKEYNVRIDKGLSSYEVEKRRERYGWNELTKEKGKPLWRLVLEQ 60
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
FDD LVKILLVAAFISFILAY H + + GFE YVEP VIVLILVLNAIVGV QE+NAE
Sbjct: 61 FDDMLVKILLVAAFISFILAYLHGDECEELGFEAYVEPFVIVLILVLNAIVGVIQETNAE 120
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
KALEALK++QCESGKVLRDGY VPDLPA LVPGDIVEL VGDKVPADMRVAALKTS+LR
Sbjct: 121 KALEALKEMQCESGKVLRDGYFVPDLPARELVPGDIVELRVGDKVPADMRVAALKTSTLR 180
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
VEQSSLTGEAMP+LKGTSP+F+DDCELQAKENMVFAGTTVVNGSC+CIV+NTGMNTEIGK
Sbjct: 181 VEQSSLTGEAMPVLKGTSPIFMDDCELQAKENMVFAGTTVVNGSCICIVVNTGMNTEIGK 240
Query: 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANV 300
IQ QIH+ASLEES+TPL+KKLDEFGNRLTT IGLVCL+VW++NY+ FL+WD+V+GWP N
Sbjct: 241 IQTQIHEASLEESNTPLKKKLDEFGNRLTTVIGLVCLIVWVINYKYFLTWDLVNGWPTNF 300
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
+FSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT
Sbjct: 301 RFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMS TEFFTLG K T SRIFHVEG+TYDPKDGGIVDW CYNMDANL
Sbjct: 361 TVICSDKTGTLTTNQMSATEFFTLGGKITSSRIFHVEGSTYDPKDGGIVDWNCYNMDANL 420
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
QAMA+ICAVCNDAG++C+G LFRATGLPTEAALKVLVEKMG PDVK RNKI DTQLAA+Y
Sbjct: 421 QAMAEICAVCNDAGIFCNGRLFRATGLPTEAALKVLVEKMGVPDVKARNKIRDTQLAASY 480
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
LID STV+LGCCEWWTKRSKRVATLEFDRIRKSMSV+VREPTG N+LLVKG+VESLLERS
Sbjct: 481 LIDRSTVKLGCCEWWTKRSKRVATLEFDRIRKSMSVLVREPTGRNRLLVKGAVESLLERS 540
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
SHVQLADGS+VPLDEP QL+L R+LEMSSKGLRCLG+AYKD+LGEFSDYY+E+HPAHKK
Sbjct: 541 SHVQLADGSLVPLDEPYRQLLLLRNLEMSSKGLRCLGLAYKDDLGEFSDYYTETHPAHKK 600
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDP+CYS+IES+LVFVGVVGLRDPPR V KAIDDCR AGI+VMVITGDNKSTAEAIC+
Sbjct: 601 LLDPACYSSIESELVFVGVVGLRDPPRDEVHKAIDDCREAGIKVMVITGDNKSTAEAICQ 660
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+I+LFS E L G SFTGKEFMALS ++QIE LSK GGKVFSRAEPRHKQEIVRMLKEMG
Sbjct: 661 EIRLFSEGEQLKGASFTGKEFMALSPSEQIEILSKPGGKVFSRAEPRHKQEIVRMLKEMG 720
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
E+VAMTGDGVNDAPALKLADIG+AMGITGTEV
Sbjct: 721 EIVAMTGDGVNDAPALKLADIGIAMGITGTEV 752
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359489590|ref|XP_002264585.2| PREDICTED: calcium-transporting ATPase, endoplasmic reticulum-type-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1338 bits (3462), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/752 (86%), Positives = 704/752 (93%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
MEE PFPAWSW+VEQCLKEYNV++DKGLSS EVEKRRERYGWNEL KEKGKPLW+LVLEQ
Sbjct: 1 MEENPFPAWSWSVEQCLKEYNVRIDKGLSSYEVEKRRERYGWNELTKEKGKPLWRLVLEQ 60
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
FDD LVKILLVAAFISFILAY H + + GFE YVEP VIVLILVLNAIVGV QE+NAE
Sbjct: 61 FDDMLVKILLVAAFISFILAYLHGDECEELGFEAYVEPFVIVLILVLNAIVGVIQETNAE 120
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
KALEALK++QCESGKVLRDGY VPDLPA LVPGDIVEL VGDKVPADMRVAALKTS+LR
Sbjct: 121 KALEALKEMQCESGKVLRDGYFVPDLPARELVPGDIVELRVGDKVPADMRVAALKTSTLR 180
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
VEQSSLTGEAMP+LKGTSP+F+DDCELQAKENMVFAGTTVVNGSC+CIV+NTGMNTEIGK
Sbjct: 181 VEQSSLTGEAMPVLKGTSPIFMDDCELQAKENMVFAGTTVVNGSCICIVVNTGMNTEIGK 240
Query: 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANV 300
IQ QIH+ASLEES+TPL+KKLDEFGNRLTT IGLVCL+VW++NY+ FL+WD+V+GWP N
Sbjct: 241 IQTQIHEASLEESNTPLKKKLDEFGNRLTTVIGLVCLIVWVINYKYFLTWDLVNGWPTNF 300
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
+FSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT
Sbjct: 301 RFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMS TEFFTLG K T SRIFHVEG+TYDPKDGGIVDW CYNMDANL
Sbjct: 361 TVICSDKTGTLTTNQMSATEFFTLGGKITSSRIFHVEGSTYDPKDGGIVDWNCYNMDANL 420
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
QAMA+ICAVCNDAG++C+G LFRATGLPTEAALKVLVEKMG PDVK RNKI DTQLAA+Y
Sbjct: 421 QAMAEICAVCNDAGIFCNGRLFRATGLPTEAALKVLVEKMGVPDVKARNKIRDTQLAASY 480
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
LID STV+LGCCEWWTKRSKRVATLEFDRIRKSMSV+VREPTG N+LLVKG+VESLLERS
Sbjct: 481 LIDRSTVKLGCCEWWTKRSKRVATLEFDRIRKSMSVLVREPTGRNRLLVKGAVESLLERS 540
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
SHVQLADGS+VPLDEP QL+L R+LEMSSKGLRCLG+AYKD+LGEFSDYY+E+HPAHKK
Sbjct: 541 SHVQLADGSLVPLDEPYRQLLLLRNLEMSSKGLRCLGLAYKDDLGEFSDYYTETHPAHKK 600
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDP+CYS+IES+LVFVGVVGLRDPPR V KAIDDCR AGI+VMVITGDNKSTAEAIC+
Sbjct: 601 LLDPACYSSIESELVFVGVVGLRDPPRDEVHKAIDDCREAGIKVMVITGDNKSTAEAICQ 660
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+I+LFS E L G SFTGKEFMALS ++QIE LSK GGKVFSRAEPRHKQEIVRMLKEMG
Sbjct: 661 EIRLFSEGEQLKGASFTGKEFMALSPSEQIEILSKPGGKVFSRAEPRHKQEIVRMLKEMG 720
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
E+VAMTGDGVNDAPALKLADIG+AMGITGTEV
Sbjct: 721 EIVAMTGDGVNDAPALKLADIGIAMGITGTEV 752
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356520254|ref|XP_003528778.1| PREDICTED: calcium-transporting ATPase, endoplasmic reticulum-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1315 bits (3402), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 629/754 (83%), Positives = 698/754 (92%), Gaps = 2/754 (0%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
MEEKPFPAWSW++EQCLKEY VKLDKGLS+ EV+KR E+YG NEL KEKGKPLW+LVLEQ
Sbjct: 5 MEEKPFPAWSWSIEQCLKEYGVKLDKGLSTYEVQKRHEKYGMNELAKEKGKPLWELVLEQ 64
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
FDD LVKILL AAFISF+LAYFH SDSG+SGFE YVEPLVI+LILVLNAIVGVWQE+NAE
Sbjct: 65 FDDMLVKILLAAAFISFLLAYFHGSDSGESGFEAYVEPLVIILILVLNAIVGVWQENNAE 124
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
KALEALK++Q ESGKVLRDGY VPDLPA LVPGDIVEL VGDKVPADMRVAALKTS+LR
Sbjct: 125 KALEALKELQSESGKVLRDGYFVPDLPAKELVPGDIVELHVGDKVPADMRVAALKTSTLR 184
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
VEQSSLTGEAMP+LKGT+PVFLDDCELQAKENMVFAGTTVVNGSCVCIVI TGM+TEIGK
Sbjct: 185 VEQSSLTGEAMPVLKGTNPVFLDDCELQAKENMVFAGTTVVNGSCVCIVITTGMDTEIGK 244
Query: 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANV 300
I KQIH+AS EESDTPLRKKLDEFGNRLTTAIGLVCL+VW++NY+NF+SW+VVDGWP+N+
Sbjct: 245 IHKQIHEASQEESDTPLRKKLDEFGNRLTTAIGLVCLIVWVINYKNFISWEVVDGWPSNI 304
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
FSF+KCTYYFKIAV+LAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT
Sbjct: 305 NFSFQKCTYYFKIAVSLAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 364
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQM+VTEFFTLG KTT SR+ VEGTTYDPKDGGI+DW CYNMDANL
Sbjct: 365 TVICSDKTGTLTTNQMAVTEFFTLGGKTTASRLISVEGTTYDPKDGGILDWGCYNMDANL 424
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKI-SDTQLAAN 479
Q MA+ICAVCNDAG+Y DG LFRATGLPTEAALKVLVEKMG PD K RNKI ++T+LAAN
Sbjct: 425 QVMAEICAVCNDAGIYFDGRLFRATGLPTEAALKVLVEKMGVPDAKARNKIRNNTELAAN 484
Query: 480 YLIDSST-VRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLE 538
+++ +T V+LGCCEWW KRSK+VATLEFDRIRKSMSVIVREP G N+LLVKG+VESLLE
Sbjct: 485 NMMNGNTMVKLGCCEWWNKRSKKVATLEFDRIRKSMSVIVREPNGQNRLLVKGAVESLLE 544
Query: 539 RSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAH 598
RSSHVQLADGS+VP+D+ C +L+L R EMSSKGLRCLG AY DELGEFSDYY+++HPAH
Sbjct: 545 RSSHVQLADGSLVPIDDQCRELLLRRLQEMSSKGLRCLGFAYNDELGEFSDYYADTHPAH 604
Query: 599 KKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAI 658
KKLLDP+ YS+IESDLVFVG+VGLRDPPR V KAI+DC+ AGI VMVITGDNKSTAEAI
Sbjct: 605 KKLLDPTYYSSIESDLVFVGIVGLRDPPREEVHKAIEDCKEAGIRVMVITGDNKSTAEAI 664
Query: 659 CRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKE 718
CR+IKLFS +EDLTG+S GKEF++LS ++Q++ L + GGKVFSRAEPRHKQEIVR+LKE
Sbjct: 665 CREIKLFSKDEDLTGQSLAGKEFISLSHSEQVKILLRPGGKVFSRAEPRHKQEIVRLLKE 724
Query: 719 MGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
MGE+VAMTGDGVNDAPALKLADIG+AMGITGTEV
Sbjct: 725 MGEIVAMTGDGVNDAPALKLADIGIAMGITGTEV 758
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224127987|ref|XP_002320213.1| endoplasmic reticulum [ER]-type calcium ATPase [Populus trichocarpa] gi|222860986|gb|EEE98528.1| endoplasmic reticulum [ER]-type calcium ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1311 bits (3393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 643/752 (85%), Positives = 693/752 (92%), Gaps = 6/752 (0%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
MEEKPFPAWSW+VEQCLKE+NVKLDKGLSS EVEKRRERYGWNEL KEKGKPLW LVLEQ
Sbjct: 1 MEEKPFPAWSWSVEQCLKEFNVKLDKGLSSYEVEKRRERYGWNELAKEKGKPLWWLVLEQ 60
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
FDD LVKILLVAAFISFILAY H+ +SG++GFE YVEPLVIVLIL LNAIVGVWQE+NAE
Sbjct: 61 FDDMLVKILLVAAFISFILAYLHAGESGEAGFEAYVEPLVIVLILALNAIVGVWQETNAE 120
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
KALEALK++QCESGKVLRDGY++P+LPA LVPGDIVEL VGDKVPADMRVA LKTS+LR
Sbjct: 121 KALEALKEMQCESGKVLRDGYMMPELPARELVPGDIVELRVGDKVPADMRVAVLKTSTLR 180
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
VEQSSLTGEAMP+LKGT+P+F+DDCELQAKENMVFAGTTVVNGSC+CIVI+TGM TEIGK
Sbjct: 181 VEQSSLTGEAMPVLKGTAPIFMDDCELQAKENMVFAGTTVVNGSCICIVISTGMKTEIGK 240
Query: 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANV 300
IQKQIH+ASLEESDTPL+KKLDEFG RLTTAIG CLVVWI+NY+NFLSWDVVDGWP N+
Sbjct: 241 IQKQIHEASLEESDTPLKKKLDEFGGRLTTAIGFACLVVWIINYKNFLSWDVVDGWPTNI 300
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
+FSFEKCTYYFKIAVALAVAAIPEGLPAVITT LALGTRKMAQKNAIVRKLPSVETLGCT
Sbjct: 301 RFSFEKCTYYFKIAVALAVAAIPEGLPAVITTSLALGTRKMAQKNAIVRKLPSVETLGCT 360
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMSVTEFFTLG KTT SRIF VEGTTYDPKDGGIVDW CYNMDANL
Sbjct: 361 TVICSDKTGTLTTNQMSVTEFFTLGGKTTSSRIFRVEGTTYDPKDGGIVDWTCYNMDANL 420
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
QAMA+ICAVCNDAG++CDG LFRATGLPTEAALKVLVEKMG PD K R KI D QLAANY
Sbjct: 421 QAMAEICAVCNDAGIFCDGRLFRATGLPTEAALKVLVEKMGVPDAKAREKIRDMQLAANY 480
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
LID S CEWWTKR KR+ATLEFDRIRKSMS+IVREP G N+LLVKG+VESLLERS
Sbjct: 481 LIDRS------CEWWTKRLKRLATLEFDRIRKSMSIIVREPNGQNRLLVKGAVESLLERS 534
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
SHVQLADGSVVP+DEPC QL+ R LEMSSKGLRCLG+AYKD+LGEFSDY++E+HPAHKK
Sbjct: 535 SHVQLADGSVVPIDEPCRQLLSLRLLEMSSKGLRCLGLAYKDDLGEFSDYHAENHPAHKK 594
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDP+ Y +IESDLVFVGVVGLRDPPR V KAI+DCR AGI VMVITGDNKSTAEAIC+
Sbjct: 595 LLDPAYYMSIESDLVFVGVVGLRDPPREEVHKAIEDCRDAGIRVMVITGDNKSTAEAICK 654
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+IKLF E L GRSFTGKEF ALS ++Q+E LSK GGKVFSRAEPRHKQEIVRMLK+MG
Sbjct: 655 EIKLFDEGEGLRGRSFTGKEFTALSPSEQMEILSKPGGKVFSRAEPRHKQEIVRMLKDMG 714
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
E+VAMTGDGVNDAPALKLADIG+AMGITGTEV
Sbjct: 715 EIVAMTGDGVNDAPALKLADIGIAMGITGTEV 746
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: N/A Phylum: Streptophyta Superkingdom: |
| >gi|356559943|ref|XP_003548255.1| PREDICTED: calcium-transporting ATPase, endoplasmic reticulum-type-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1298 bits (3360), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 632/754 (83%), Positives = 697/754 (92%), Gaps = 2/754 (0%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
MEEKPFPAWSW+VEQCLKEY VKLDKGLS+ EV+KR E+YGWNEL KEKGKPLW+LVLEQ
Sbjct: 5 MEEKPFPAWSWSVEQCLKEYGVKLDKGLSTYEVQKRLEKYGWNELAKEKGKPLWELVLEQ 64
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
FDD LVKILL AAFISF+LAYFH SDS +SGFE YVEPLVI+LILVLNAIVGVWQE+NAE
Sbjct: 65 FDDMLVKILLAAAFISFLLAYFHGSDSEESGFEAYVEPLVIILILVLNAIVGVWQENNAE 124
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
KALEALK++QCESGKVLRDGY VPDLPA LVPGDIVEL VGDK PADMRVAALKTS LR
Sbjct: 125 KALEALKELQCESGKVLRDGYFVPDLPARELVPGDIVELHVGDKAPADMRVAALKTSILR 184
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
VEQSSLTGEAMP+LKGT+PVFLDDCELQAKENMVFAGTTVVNGSCVCIVI TGM+TEIGK
Sbjct: 185 VEQSSLTGEAMPVLKGTNPVFLDDCELQAKENMVFAGTTVVNGSCVCIVITTGMDTEIGK 244
Query: 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANV 300
IQKQIH+AS EESDTPL+KKLDEFGNRLTTAIGLVCL+VW++NY+NF+SWDVVDGWP+N+
Sbjct: 245 IQKQIHEASQEESDTPLKKKLDEFGNRLTTAIGLVCLIVWVINYKNFISWDVVDGWPSNI 304
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
+FSF+KCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT
Sbjct: 305 KFSFQKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 364
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQM+VTEFFTLG KTT SR+ VEGTTYDPKDGGIVDW CYNMD NL
Sbjct: 365 TVICSDKTGTLTTNQMAVTEFFTLGGKTTASRLIGVEGTTYDPKDGGIVDWGCYNMDVNL 424
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISD-TQLAAN 479
Q MA+ICAVCNDAG+Y DG LFRATGLPTEAALKVLVEKMG PD K RNKI D T+LAAN
Sbjct: 425 QVMAEICAVCNDAGIYFDGRLFRATGLPTEAALKVLVEKMGVPDAKSRNKIRDNTELAAN 484
Query: 480 YLIDSST-VRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLE 538
+++ +T V+LGCCEWW KRSK+VATLEFDRIRKSMSVIVREP G N+LLVKG+VESLLE
Sbjct: 485 NMMNGNTVVKLGCCEWWNKRSKKVATLEFDRIRKSMSVIVREPNGQNRLLVKGAVESLLE 544
Query: 539 RSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAH 598
RSSHVQLADGSVVP+D+ C +L+L R EMSSKGLRCLG AY D+LGEFSDYY+++HPAH
Sbjct: 545 RSSHVQLADGSVVPIDDQCRELLLQRLQEMSSKGLRCLGFAYNDDLGEFSDYYADTHPAH 604
Query: 599 KKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAI 658
KKLLDP+ YS+IESDLVFVG++GLRDPPR V KAI+DC+ AGI VMVITGDNKSTAEAI
Sbjct: 605 KKLLDPTHYSSIESDLVFVGIIGLRDPPREEVHKAIEDCKEAGIRVMVITGDNKSTAEAI 664
Query: 659 CRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKE 718
CR+IKLFS +EDLTG+S TGKEF++ S ++Q++ L + GGKVFSRAEPRHKQEIVR+LKE
Sbjct: 665 CREIKLFSKDEDLTGQSLTGKEFISFSPSEQVKILLRPGGKVFSRAEPRHKQEIVRLLKE 724
Query: 719 MGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
MGE+VAMTGDGVNDAPALKLADIG+AMGITGTEV
Sbjct: 725 MGEIVAMTGDGVNDAPALKLADIGIAMGITGTEV 758
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|17342714|gb|AAL35972.1| type IIA calcium ATPase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1286 bits (3327), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 622/752 (82%), Positives = 693/752 (92%), Gaps = 3/752 (0%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
MEEKPFPAWSW+V++CL+EY VKL+KGLSS EV+KRRE+YGWNEL KEKGKPLW+LVLEQ
Sbjct: 1 MEEKPFPAWSWSVDECLEEYGVKLEKGLSSNEVQKRREKYGWNELAKEKGKPLWKLVLEQ 60
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
FDD LVKILL AAFISF+LAYF S+SG FE YVEPLVI+LILVLNAIVGVWQE+NAE
Sbjct: 61 FDDMLVKILLAAAFISFLLAYFEGSESG---FEAYVEPLVIILILVLNAIVGVWQENNAE 117
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
KALEALK++QCES KVLRDGY VPDLPA LVPGDIVEL VGDKVPADMRVAALKTS+LR
Sbjct: 118 KALEALKELQCESIKVLRDGYFVPDLPARELVPGDIVELRVGDKVPADMRVAALKTSTLR 177
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
+EQSSLTGEAMP+LKGT+P+F+DDCELQAKENMVFAGTTVVNGSC+CIVI T MNTEIGK
Sbjct: 178 LEQSSLTGEAMPVLKGTNPIFMDDCELQAKENMVFAGTTVVNGSCICIVITTAMNTEIGK 237
Query: 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANV 300
IQKQIH+ASLEESDTPL+KKLDEFG RLTT+IG+VCLVVWI+NY+NF+SWDVVDGWP N+
Sbjct: 238 IQKQIHEASLEESDTPLKKKLDEFGGRLTTSIGIVCLVVWIINYKNFISWDVVDGWPTNI 297
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
QFSF+KCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT
Sbjct: 298 QFSFQKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 357
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMS TEFFTLG KTT R+ VEGTTYDPKDGGIVDW CYNMDANL
Sbjct: 358 TVICSDKTGTLTTNQMSATEFFTLGGKTTACRVISVEGTTYDPKDGGIVDWTCYNMDANL 417
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
AMA+ICAVCNDAGVY DG LFRATGLPTEAALKVLVEKMGFPD K RNK D +A N
Sbjct: 418 LAMAEICAVCNDAGVYFDGRLFRATGLPTEAALKVLVEKMGFPDTKSRNKTHDALVATNN 477
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
++D +T++LGCCEWW +RSKRVATLEFDR+RKSMSVIVREP G N+LLVKG+VESLLERS
Sbjct: 478 MVDCNTLKLGCCEWWNRRSKRVATLEFDRVRKSMSVIVREPDGQNRLLVKGAVESLLERS 537
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
S+VQLADGS+VP+D+ C +L+L R EMSSKGLRCLG+A KDELGEFSDYY+++HPAHKK
Sbjct: 538 SYVQLADGSLVPIDDQCRELLLQRLHEMSSKGLRCLGLACKDELGEFSDYYADTHPAHKK 597
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDP+ YS+IESDL+FVGVVGLRDPPR V KAI+DC+ AGI VMVITGDNKSTAEAIC+
Sbjct: 598 LLDPTYYSSIESDLIFVGVVGLRDPPREEVHKAIEDCKQAGIRVMVITGDNKSTAEAICK 657
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+IKLFS +EDLTG+S TGKEFM+LS ++Q++ L ++GGKVFSRAEPRHKQEIVR+LKEMG
Sbjct: 658 EIKLFSTDEDLTGQSLTGKEFMSLSHSEQVKLLLRNGGKVFSRAEPRHKQEIVRLLKEMG 717
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
E+VAMTGDGVNDAPALKLADIG+AMGITGTEV
Sbjct: 718 EIVAMTGDGVNDAPALKLADIGIAMGITGTEV 749
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357514479|ref|XP_003627528.1| Calcium-transporting ATPase, endoplasmic reticulum-type [Medicago truncatula] gi|355521550|gb|AET02004.1| Calcium-transporting ATPase, endoplasmic reticulum-type [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 1271 bits (3288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 618/752 (82%), Positives = 687/752 (91%), Gaps = 9/752 (1%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
MEEKPFPAWSW+V++CL+EY VKL+KGLSS EV+KRRE+YGWNEL KEKGKPLW+LVLEQ
Sbjct: 1 MEEKPFPAWSWSVDECLEEYGVKLEKGLSSNEVQKRREKYGWNELAKEKGKPLWKLVLEQ 60
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
FDD LVKILL AAFISF+LAYF S+SG FE YVEPLVI+LILVLNAIVGVWQE+NAE
Sbjct: 61 FDDMLVKILLAAAFISFLLAYFEGSESG---FEAYVEPLVIILILVLNAIVGVWQENNAE 117
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
KALEALK++QCES KVLRDGY VPDLPA LVPGDIVEL VGDKVPADMRVAALKTS+LR
Sbjct: 118 KALEALKELQCESIKVLRDGYFVPDLPARELVPGDIVELRVGDKVPADMRVAALKTSTLR 177
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
+EQSSLTGEAMP+LKGT+P+F+DDCELQAKENMVFAGTTVVNGSC+CIVI T MNTEIGK
Sbjct: 178 LEQSSLTGEAMPVLKGTNPIFMDDCELQAKENMVFAGTTVVNGSCICIVITTAMNTEIGK 237
Query: 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANV 300
IQKQIH+ASLEESDTPL+KKLDEFG RLTT+IG+VCLVVWI+NY+NF+SWDVVDGWP N+
Sbjct: 238 IQKQIHEASLEESDTPLKKKLDEFGGRLTTSIGIVCLVVWIINYKNFISWDVVDGWPTNI 297
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
QFSF+KCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT
Sbjct: 298 QFSFQKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 357
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMS TEFFTLG KTT R+ VEGTTYDPKDGGIVDW CYNMDANL
Sbjct: 358 TVICSDKTGTLTTNQMSATEFFTLGGKTTACRVISVEGTTYDPKDGGIVDWTCYNMDANL 417
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
AMA+ICAVCNDAGVY DG LFRATGLPTEAALKVLVEKMGFPD K RNK D +A N
Sbjct: 418 LAMAEICAVCNDAGVYFDGRLFRATGLPTEAALKVLVEKMGFPDTKSRNKTHDALVATNN 477
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
++D CCEWW +RSKRVATLEFDR+RKSMSVIVREP G N+LLVKG+VESLLERS
Sbjct: 478 MVDC------CCEWWNRRSKRVATLEFDRVRKSMSVIVREPDGQNRLLVKGAVESLLERS 531
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
S+VQLADGS+VP+D+ C +L+L R EMSSKGLRCLG+A KDELGEFSDYY+++HPAHKK
Sbjct: 532 SYVQLADGSLVPIDDQCRELLLQRLHEMSSKGLRCLGLACKDELGEFSDYYADTHPAHKK 591
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDP+ YS+IESDL+FVGVVGLRDPPR V KAI+DC+ AGI VMVITGDNKSTAEAIC+
Sbjct: 592 LLDPTYYSSIESDLIFVGVVGLRDPPREEVHKAIEDCKQAGIRVMVITGDNKSTAEAICK 651
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+IKLFS +EDLTG+S TGKEFM+LS ++Q++ L ++GGKVFSRAEPRHKQEIVR+LKEMG
Sbjct: 652 EIKLFSTDEDLTGQSLTGKEFMSLSHSEQVKLLLRNGGKVFSRAEPRHKQEIVRLLKEMG 711
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
E+VAMTGDGVNDAPALKLADIG+AMGITGTE+
Sbjct: 712 EIVAMTGDGVNDAPALKLADIGIAMGITGTEM 743
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|350538145|ref|NP_001234073.1| calcium-transporting ATPase, endoplasmic reticulum-type [Solanum lycopersicum] gi|68052031|sp|Q42883.1|ECAP_SOLLC RecName: Full=Calcium-transporting ATPase, endoplasmic reticulum-type gi|170378|gb|AAA34138.1| Ca2+-ATPase [Solanum lycopersicum] gi|4206311|gb|AAD11617.1| Ca2+-ATPase [Solanum lycopersicum] gi|4206313|gb|AAD11618.1| Ca2+-ATPase [Solanum lycopersicum] | Back alignment and taxonomy information |
|---|
Score = 1252 bits (3239), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/752 (80%), Positives = 680/752 (90%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
MEEKPFPAWSW+V+QCLKEY VKL+KGLS+ EV+KRRERYG NEL+KEKGKPLW+LVLEQ
Sbjct: 1 MEEKPFPAWSWSVDQCLKEYQVKLEKGLSTYEVDKRRERYGLNELEKEKGKPLWRLVLEQ 60
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
FDDTLVKILL AAFISF+LAY + ++G+SGFE YVEPLVI+ ILVLNAIVGVWQESNAE
Sbjct: 61 FDDTLVKILLGAAFISFVLAYVNQDETGESGFEAYVEPLVILWILVLNAIVGVWQESNAE 120
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
KALEALK++Q ES KVLRDGYLVPD PA LVPGDIVEL VGDKVPADMRVA LK+S+LR
Sbjct: 121 KALEALKEMQGESAKVLRDGYLVPDFPAKELVPGDIVELRVGDKVPADMRVATLKSSTLR 180
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
VEQSSLTGE+MP+ K T + DDCELQAKENMVFAGTTVVNGSC+CIV+NTGM TEIGK
Sbjct: 181 VEQSSLTGESMPVTKSTDFLATDDCELQAKENMVFAGTTVVNGSCICIVVNTGMCTEIGK 240
Query: 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANV 300
IQ+QIHDAS+EESDTPL+KKLDEFGNRLT AIG+VCLVVW +NY+ FLSW+VVD WP++
Sbjct: 241 IQRQIHDASMEESDTPLKKKLDEFGNRLTFAIGVVCLVVWAINYKYFLSWEVVDDWPSDF 300
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
+FSFEKC YYFKIAVALAVAAIPEGLP+VITTCLALGTRKMAQKNAIVRKL SVETLGCT
Sbjct: 301 RFSFEKCAYYFKIAVALAVAAIPEGLPSVITTCLALGTRKMAQKNAIVRKLQSVETLGCT 360
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMSV+EFFTLGRKTT R+F VEGTTYDPKDGGI++W C MDANL
Sbjct: 361 TVICSDKTGTLTTNQMSVSEFFTLGRKTTACRVFGVEGTTYDPKDGGIMNWNCCKMDANL 420
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
MA+ICA+CNDAGV+CDG LF+ATGLPTEAALKVLVEKMG PD K R KI D Q+ ++Y
Sbjct: 421 LLMAEICAICNDAGVFCDGRLFKATGLPTEAALKVLVEKMGVPDSKARCKIRDAQIVSSY 480
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
LID +TV+LGCC+WW KRSKRVATLEFDR+RKSM VIVREP G N+LLVKG+ ESLLERS
Sbjct: 481 LIDRNTVKLGCCDWWMKRSKRVATLEFDRVRKSMGVIVREPNGSNRLLVKGAFESLLERS 540
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
++VQLADGS VPLDE C QL+L + LEMSSKGLRCLG+AYKD+LGE S YY+ +HPAHKK
Sbjct: 541 TYVQLADGSTVPLDESCRQLLLLKQLEMSSKGLRCLGLAYKDDLGELSGYYAATHPAHKK 600
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDPSCYS+IESDLVFVGVVGLRDPPR V +A++DCR AGI++MVITGDNKSTAEA+CR
Sbjct: 601 LLDPSCYSSIESDLVFVGVVGLRDPPREEVHRAVNDCRRAGIKIMVITGDNKSTAEAVCR 660
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+I+LFS E+L G SFTGKEFMA SS QQIE LS+ GGKVFSRAEPRHKQEIVRMLKEMG
Sbjct: 661 EIQLFSNGENLRGSSFTGKEFMAFSSQQQIEILSQDGGKVFSRAEPRHKQEIVRMLKEMG 720
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
E+VAMTGDGVNDAPALKLADIG+AMGITGTEV
Sbjct: 721 EIVAMTGDGVNDAPALKLADIGIAMGITGTEV 752
|
Source: Solanum lycopersicum Species: Solanum lycopersicum Genus: Solanum Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|116248601|gb|ABJ90445.1| endomembrane Ca2+ ATPase 2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1188 bits (3073), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 579/752 (76%), Positives = 663/752 (88%), Gaps = 4/752 (0%)
Query: 2 EEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQF 61
EEK F AWSW+VEQCLKEY +LDKGL+S +V+ RR++YG+NEL KEKGKPLW LVLEQF
Sbjct: 3 EEKSFSAWSWSVEQCLKEYKTRLDKGLTSEDVQIRRQKYGFNELAKEKGKPLWHLVLEQF 62
Query: 62 DDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEK 121
DDTLVKILL AAFISF+LA+ SGFE +VEP VIVLIL+LNA+VGVWQESNAEK
Sbjct: 63 DDTLVKILLGAAFISFVLAFLGEEHGSGSGFEAFVEPFVIVLILILNAVVGVWQESNAEK 122
Query: 122 ALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRV 181
ALEALK++QCES KVLRDG ++P+LPA LVPGDIVEL VGDKVPADMRV+ LKTS+LRV
Sbjct: 123 ALEALKEMQCESAKVLRDGNVLPNLPARELVPGDIVELNVGDKVPADMRVSGLKTSTLRV 182
Query: 182 EQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKI 241
EQSSLTGEAMP+LKG + V +DDCELQ KENMVFAGTTVVNGSCVCIV + GM+TEIGKI
Sbjct: 183 EQSSLTGEAMPVLKGANLVVMDDCELQGKENMVFAGTTVVNGSCVCIVTSIGMDTEIGKI 242
Query: 242 QKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGW-PANV 300
Q+QIH+ASLEES+TPL+KKLDEFG+RLTTAI +VC++VW++NY+NF+SWDVVDG+ P N+
Sbjct: 243 QRQIHEASLEESETPLKKKLDEFGSRLTTAICIVCVLVWMINYKNFVSWDVVDGYKPVNI 302
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
+FSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT
Sbjct: 303 KFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 362
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMS TEFFTLG KTT +R+F V GTTYDPKDGGI+DW C NMDANL
Sbjct: 363 TVICSDKTGTLTTNQMSATEFFTLGGKTTTTRVFSVSGTTYDPKDGGIMDWGCNNMDANL 422
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
QA+A+IC++CNDAGV+ +G LFRATGLPTEAALKVLVEKMG P+ K I + N+
Sbjct: 423 QAVAEICSICNDAGVFYEGKLFRATGLPTEAALKVLVEKMGIPEKKNSENIEEV---TNF 479
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
+ S+V+L CC+WW KRSK+VATLEFDR+RKSMSVIV EP G N+LLVKG+ ES+LERS
Sbjct: 480 SDNGSSVKLACCDWWNKRSKKVATLEFDRVRKSMSVIVSEPNGQNRLLVKGAAESILERS 539
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
S QLADGS+V LDE +++L +H EM+SKGLRCLG+AYKDELGEFSDY SE HP+HKK
Sbjct: 540 SFAQLADGSLVALDESSREVILKKHSEMTSKGLRCLGLAYKDELGEFSDYSSEEHPSHKK 599
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDPS YS IE++L+FVGVVGLRDPPR V +AI+DCR AGI VMVITGDNKSTAEAIC
Sbjct: 600 LLDPSSYSNIETNLIFVGVVGLRDPPREEVGRAIEDCRDAGIRVMVITGDNKSTAEAICC 659
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+I+LFS NEDL+ SFTGKEFM+L ++++ E LSK GGKVFSRAEPRHKQEIVRMLKEMG
Sbjct: 660 EIRLFSENEDLSQSSFTGKEFMSLPASRRSEILSKSGGKVFSRAEPRHKQEIVRMLKEMG 719
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
E+VAMTGDGVNDAPALKLADIG+AMGITGTEV
Sbjct: 720 EIVAMTGDGVNDAPALKLADIGIAMGITGTEV 751
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|15236991|ref|NP_191999.1| Ca2+-transporting ATPase [Arabidopsis thaliana] gi|12230024|sp|O23087.1|ECA2_ARATH RecName: Full=Calcium-transporting ATPase 2, endoplasmic reticulum-type gi|2252852|gb|AAB62850.1| similar to the cation transport ATPases family [Arabidopsis thaliana] gi|4185853|emb|CAA10659.1| Ca2+-ATPase [Arabidopsis thaliana] gi|7267429|emb|CAB80899.1| Ca2+-transporting ATPase-like protein [Arabidopsis thaliana] gi|332656553|gb|AEE81953.1| Ca2+-transporting ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1187 bits (3070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 580/752 (77%), Positives = 663/752 (88%), Gaps = 4/752 (0%)
Query: 2 EEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQF 61
EEK F AWSW+VEQCLKEY +LDKGL+S +V+ RR++YG+NEL KEKGKPLW LVLEQF
Sbjct: 3 EEKSFSAWSWSVEQCLKEYKTRLDKGLTSEDVQIRRQKYGFNELAKEKGKPLWHLVLEQF 62
Query: 62 DDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEK 121
DDTLVKILL AAFISF+LA+ SGFE +VEP VIVLIL+LNA+VGVWQESNAEK
Sbjct: 63 DDTLVKILLGAAFISFVLAFLGEEHGSGSGFEAFVEPFVIVLILILNAVVGVWQESNAEK 122
Query: 122 ALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRV 181
ALEALK++QCES KVLRDG ++P+LPA LVPGDIVEL VGDKVPADMRV+ LKTS+LRV
Sbjct: 123 ALEALKEMQCESAKVLRDGNVLPNLPARELVPGDIVELNVGDKVPADMRVSGLKTSTLRV 182
Query: 182 EQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKI 241
EQSSLTGEAMP+LKG + V +DDCELQ KENMVFAGTTVVNGSCVCIV + GM+TEIGKI
Sbjct: 183 EQSSLTGEAMPVLKGANLVVMDDCELQGKENMVFAGTTVVNGSCVCIVTSIGMDTEIGKI 242
Query: 242 QKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGW-PANV 300
Q+QIH+ASLEES+TPL+KKLDEFG+RLTTAI +VC++VW++NY+NF+SWDVVDG+ P N+
Sbjct: 243 QRQIHEASLEESETPLKKKLDEFGSRLTTAICIVCVLVWMINYKNFVSWDVVDGYKPVNI 302
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
+FSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT
Sbjct: 303 KFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 362
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMS TEFFTLG KTT +R+F V GTTYDPKDGGIVDW C NMDANL
Sbjct: 363 TVICSDKTGTLTTNQMSATEFFTLGGKTTTTRVFSVSGTTYDPKDGGIVDWGCNNMDANL 422
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
QA+A+IC++CNDAGV+ +G LFRATGLPTEAALKVLVEKMG P+ K I + N+
Sbjct: 423 QAVAEICSICNDAGVFYEGKLFRATGLPTEAALKVLVEKMGIPEKKNSENIEE---VTNF 479
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
+ S+V+L CC+WW KRSK+VATLEFDR+RKSMSVIV EP G N+LLVKG+ ES+LERS
Sbjct: 480 SDNGSSVKLACCDWWNKRSKKVATLEFDRVRKSMSVIVSEPNGQNRLLVKGAAESILERS 539
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
S QLADGS+V LDE +++L +H EM+SKGLRCLG+AYKDELGEFSDY SE HP+HKK
Sbjct: 540 SFAQLADGSLVALDESSREVILKKHSEMTSKGLRCLGLAYKDELGEFSDYSSEEHPSHKK 599
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDPS YS IE++L+FVGVVGLRDPPR V +AI+DCR AGI VMVITGDNKSTAEAIC
Sbjct: 600 LLDPSSYSNIETNLIFVGVVGLRDPPREEVGRAIEDCRDAGIRVMVITGDNKSTAEAICC 659
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+I+LFS NEDL+ SFTGKEFM+L ++++ E LSK GGKVFSRAEPRHKQEIVRMLKEMG
Sbjct: 660 EIRLFSENEDLSQSSFTGKEFMSLPASRRSEILSKSGGKVFSRAEPRHKQEIVRMLKEMG 719
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
E+VAMTGDGVNDAPALKLADIG+AMGITGTEV
Sbjct: 720 EIVAMTGDGVNDAPALKLADIGIAMGITGTEV 751
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 753 | ||||||
| UNIPROTKB|Q42883 | 1048 | LCA1 "Calcium-transporting ATP | 0.998 | 0.717 | 0.788 | 0.0 | |
| TAIR|locus:2134623 | 1054 | ECA2 "ER-type Ca2+-ATPase 2" [ | 0.993 | 0.709 | 0.751 | 2.1e-306 | |
| TAIR|locus:2026555 | 1061 | ECA4 "endomembrane-type CA-ATP | 0.970 | 0.688 | 0.609 | 7.3e-233 | |
| TAIR|locus:2026580 | 1061 | ECA1 "ER-type Ca2+-ATPase 1" [ | 0.970 | 0.688 | 0.608 | 8.4e-232 | |
| ZFIN|ZDB-GENE-020905-1 | 1005 | atp2a1 "ATPase, Ca++ transport | 0.920 | 0.689 | 0.454 | 1e-148 | |
| UNIPROTKB|Q9YGL9 | 1042 | ATP2A3 "Sarcoplasmic/endoplasm | 0.930 | 0.672 | 0.460 | 2.1e-148 | |
| UNIPROTKB|Q93084 | 1043 | ATP2A3 "Sarcoplasmic/endoplasm | 0.924 | 0.667 | 0.457 | 1.9e-147 | |
| UNIPROTKB|F1RFH9 | 993 | ATP2A1 "Uncharacterized protei | 0.933 | 0.707 | 0.460 | 3.9e-147 | |
| UNIPROTKB|Q0VCY0 | 993 | ATP2A1 "Sarcoplasmic/endoplasm | 0.932 | 0.706 | 0.460 | 6.4e-147 | |
| ZFIN|ZDB-GENE-040426-702 | 1042 | atp2a2a "ATPase, Ca++ transpor | 0.924 | 0.667 | 0.451 | 1.7e-146 |
| UNIPROTKB|Q42883 LCA1 "Calcium-transporting ATPase, endoplasmic reticulum-type" [Solanum lycopersicum (taxid:4081)] | Back alignment and assigned GO terms |
|---|
Score = 3104 (1097.7 bits), Expect = 0., P = 0.
Identities = 593/752 (78%), Positives = 663/752 (88%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
MEEKPFPAWSW+V+QCLKEY VKL+KGLS+ EV+KRRERYG NEL+KEKGKPLW+LVLEQ
Sbjct: 1 MEEKPFPAWSWSVDQCLKEYQVKLEKGLSTYEVDKRRERYGLNELEKEKGKPLWRLVLEQ 60
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYXXXXXXXXXXXXXXXXXXWQESNAE 120
FDDTLVKILL AAFISF+LAY + ++G+SGFE Y WQESNAE
Sbjct: 61 FDDTLVKILLGAAFISFVLAYVNQDETGESGFEAYVEPLVILWILVLNAIVGVWQESNAE 120
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
KALEALK++Q ES KVLRDGYLVPD PA LVPGDIVEL VGDKVPADMRVA LK+S+LR
Sbjct: 121 KALEALKEMQGESAKVLRDGYLVPDFPAKELVPGDIVELRVGDKVPADMRVATLKSSTLR 180
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
VEQSSLTGE+MP+ K T + DDCELQAKENMVFAGTTVVNGSC+CIV+NTGM TEIGK
Sbjct: 181 VEQSSLTGESMPVTKSTDFLATDDCELQAKENMVFAGTTVVNGSCICIVVNTGMCTEIGK 240
Query: 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANV 300
IQ+QIHDAS+EESDTPL+KKLDEFGNRLT AIG+VCLVVW +NY+ FLSW+VVD WP++
Sbjct: 241 IQRQIHDASMEESDTPLKKKLDEFGNRLTFAIGVVCLVVWAINYKYFLSWEVVDDWPSDF 300
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
+FSFEKC YYFKIAVALAVAAIPEGLP+VITTCLALGTRKMAQKNAIVRKL SVETLGCT
Sbjct: 301 RFSFEKCAYYFKIAVALAVAAIPEGLPSVITTCLALGTRKMAQKNAIVRKLQSVETLGCT 360
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMSV+EFFTLGRKTT R+F VEGTTYDPKDGGI++W C MDANL
Sbjct: 361 TVICSDKTGTLTTNQMSVSEFFTLGRKTTACRVFGVEGTTYDPKDGGIMNWNCCKMDANL 420
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
MA+ICA+CNDAGV+CDG LF+ATGLPTEAALKVLVEKMG PD K R KI D Q+ ++Y
Sbjct: 421 LLMAEICAICNDAGVFCDGRLFKATGLPTEAALKVLVEKMGVPDSKARCKIRDAQIVSSY 480
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
LID +TV+LGCC+WW KRSKRVATLEFDR+RKSM VIVREP G N+LLVKG+ ESLLERS
Sbjct: 481 LIDRNTVKLGCCDWWMKRSKRVATLEFDRVRKSMGVIVREPNGSNRLLVKGAFESLLERS 540
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
++VQLADGS VPLDE C QL+L + LEMSSKGLRCLG+AYKD+LGE S YY+ +HPAHKK
Sbjct: 541 TYVQLADGSTVPLDESCRQLLLLKQLEMSSKGLRCLGLAYKDDLGELSGYYAATHPAHKK 600
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDPSCYS+IESDLVFVGVVGLRDPPR V +A++DCR AGI++MVITGDNKSTAEA+CR
Sbjct: 601 LLDPSCYSSIESDLVFVGVVGLRDPPREEVHRAVNDCRRAGIKIMVITGDNKSTAEAVCR 660
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+I+LFS E+L G SFTGKEFMA SS QQIE LS+ GGKVFSRAEPRHKQEIVRMLKEMG
Sbjct: 661 EIQLFSNGENLRGSSFTGKEFMAFSSQQQIEILSQDGGKVFSRAEPRHKQEIVRMLKEMG 720
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
E+VAMTGDGVNDAPALKLADIG+AMGITGTEV
Sbjct: 721 EIVAMTGDGVNDAPALKLADIGIAMGITGTEV 752
|
|
| TAIR|locus:2134623 ECA2 "ER-type Ca2+-ATPase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2940 (1040.0 bits), Expect = 2.1e-306, P = 2.1e-306
Identities = 565/752 (75%), Positives = 646/752 (85%)
Query: 2 EEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQF 61
EEK F AWSW+VEQCLKEY +LDKGL+S +V+ RR++YG+NEL KEKGKPLW LVLEQF
Sbjct: 3 EEKSFSAWSWSVEQCLKEYKTRLDKGLTSEDVQIRRQKYGFNELAKEKGKPLWHLVLEQF 62
Query: 62 DDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYXXXXXXXXXXXXXXXXXXWQESNAEK 121
DDTLVKILL AAFISF+LA+ SGFE + WQESNAEK
Sbjct: 63 DDTLVKILLGAAFISFVLAFLGEEHGSGSGFEAFVEPFVIVLILILNAVVGVWQESNAEK 122
Query: 122 ALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRV 181
ALEALK++QCES KVLRDG ++P+LPA LVPGDIVEL VGDKVPADMRV+ LKTS+LRV
Sbjct: 123 ALEALKEMQCESAKVLRDGNVLPNLPARELVPGDIVELNVGDKVPADMRVSGLKTSTLRV 182
Query: 182 EQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKI 241
EQSSLTGEAMP+LKG + V +DDCELQ KENMVFAGTTVVNGSCVCIV + GM+TEIGKI
Sbjct: 183 EQSSLTGEAMPVLKGANLVVMDDCELQGKENMVFAGTTVVNGSCVCIVTSIGMDTEIGKI 242
Query: 242 QKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGW-PANV 300
Q+QIH+ASLEES+TPL+KKLDEFG+RLTTAI +VC++VW++NY+NF+SWDVVDG+ P N+
Sbjct: 243 QRQIHEASLEESETPLKKKLDEFGSRLTTAICIVCVLVWMINYKNFVSWDVVDGYKPVNI 302
Query: 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 360
+FSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT
Sbjct: 303 KFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCT 362
Query: 361 TVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANL 420
TVICSDKTGTLTTNQMS TEFFTLG KTT +R+F V GTTYDPKDGGIVDW C NMDANL
Sbjct: 363 TVICSDKTGTLTTNQMSATEFFTLGGKTTTTRVFSVSGTTYDPKDGGIVDWGCNNMDANL 422
Query: 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480
QA+A+IC++CNDAGV+ +G LFRATGLPTEAALKVLVEKMG P+ K I + N+
Sbjct: 423 QAVAEICSICNDAGVFYEGKLFRATGLPTEAALKVLVEKMGIPEKKNSENIEEV---TNF 479
Query: 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERS 540
+ S+V+L CC+WW KRSK+VATLEFDR+RKSMSVIV EP G N+LLVKG+ ES+LERS
Sbjct: 480 SDNGSSVKLACCDWWNKRSKKVATLEFDRVRKSMSVIVSEPNGQNRLLVKGAAESILERS 539
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
S QLADGS+V LDE +++L +H EM+SKGLRCLG+AYKDELGEFSDY SE HP+HKK
Sbjct: 540 SFAQLADGSLVALDESSREVILKKHSEMTSKGLRCLGLAYKDELGEFSDYSSEEHPSHKK 599
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
LLDPS YS IE++L+FVGVVGLRDPPR V +AI+DCR AGI VMVITGDNKSTAEAIC
Sbjct: 600 LLDPSSYSNIETNLIFVGVVGLRDPPREEVGRAIEDCRDAGIRVMVITGDNKSTAEAICC 659
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
+I+LFS NEDL+ SFTGKEFM+L ++++ E LSK GGKVFSRAEPRHKQEIVRMLKEMG
Sbjct: 660 EIRLFSENEDLSQSSFTGKEFMSLPASRRSEILSKSGGKVFSRAEPRHKQEIVRMLKEMG 719
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
E+VAMTGDGVNDAPALKLADIG+AMGITGTEV
Sbjct: 720 EIVAMTGDGVNDAPALKLADIGIAMGITGTEV 751
|
|
| TAIR|locus:2026555 ECA4 "endomembrane-type CA-ATPase 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2246 (795.7 bits), Expect = 7.3e-233, P = 7.3e-233
Identities = 456/748 (60%), Positives = 558/748 (74%)
Query: 6 FPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTL 65
FPAW V +C +++ V +KGLS+ EV KR + YG NEL+K +G +++L+LEQF+DTL
Sbjct: 24 FPAWGKDVSECEEKFGVSREKGLSTDEVLKRHQIYGLNELEKPEGTSIFKLILEQFNDTL 83
Query: 66 VKILLVAAFISFILAYFHSSDSGDSGFEDYXXXXXXXXXXXXXXXXXXWQESNAEKALEA 125
V+ILL AA ISF+LA+F + G+ G + WQE+NAEKALEA
Sbjct: 84 VRILLAAAVISFVLAFFDGDEGGEMGITAFVEPLVIFLILIVNAIVGIWQETNAEKALEA 143
Query: 126 LKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSS 185
LK+IQ + V+RDG V LPA LVPGDIVEL VGDKVPADMRV AL +S+LRVEQ S
Sbjct: 144 LKEIQSQQATVMRDGTKVSSLPAKELVPGDIVELRVGDKVPADMRVVALISSTLRVEQGS 203
Query: 186 LTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQI 245
LTGE+ + K T V ++ ++Q K+ MVFAGTTVVNG+C+C+V +TGMNTEIG++ QI
Sbjct: 204 LTGESEAVSKTTKHVD-ENADIQGKKCMVFAGTTVVNGNCICLVTDTGMNTEIGRVHSQI 262
Query: 246 HDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFE 305
+A+ E DTPL+KKL+EFG LT IGL+C +VW++N + FLSW+ VDGWP N +FSFE
Sbjct: 263 QEAAQHEEDTPLKKKLNEFGEVLTMIIGLICALVWLINVKYFLSWEYVDGWPRNFKFSFE 322
Query: 306 KCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICS 365
KCTYYF+IAVALAVAAIPEGLPAVITTCLALGTRKMAQKNA+VRKLPSVETLGCTTVICS
Sbjct: 323 KCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICS 382
Query: 366 DKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAK 425
DKTGTLTTNQM+V++ +G + R F+VEGT++DP+DG I DWP MDANLQ +AK
Sbjct: 383 DKTGTLTTNQMAVSKLVAMGSRIGTLRSFNVEGTSFDPRDGKIEDWPTGRMDANLQMIAK 442
Query: 426 ICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSS 485
I A+CNDA V F + G+PTEAALKVLVEKMGFP+ G N+ S D +
Sbjct: 443 IAAICNDANVEKSDQQFVSRGMPTEAALKVLVEKMGFPE--GLNEASS---------DGN 491
Query: 486 TVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQL 545
+R CC W++ +R+ATLEFDR RKSM V+V +G LLVKG+VE++LERS+H+QL
Sbjct: 492 VLR--CCRLWSELEQRIATLEFDRDRKSMGVMVDSSSGKKLLLVKGAVENVLERSTHIQL 549
Query: 546 ADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYY-SESHPAHKKLLDP 604
DGS LD+ L+L +MS LRCLG AY D +F+ Y SE HPAH++LL+P
Sbjct: 550 LDGSTRELDQYSRDLILQSLHDMSLSALRCLGFAYSDVPSDFATYDGSEDHPAHQQLLNP 609
Query: 605 SCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKL 664
S YS+IES+LVFVG VGLRDPPR V +AI DCR AGI VMVITGDNKSTAEAICR+I +
Sbjct: 610 SNYSSIESNLVFVGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKSTAEAICREIGV 669
Query: 665 FSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVA 724
F +ED++ RS TGKEFM + Q L + GG +FSRAEP+HKQEIVR+LKE GEVVA
Sbjct: 670 FEADEDISSRSLTGKEFMDVKD--QKNHLRQTGGLLFSRAEPKHKQEIVRLLKEDGEVVA 727
Query: 725 MTGDGVNDAPALKLADIGVAMGITGTEV 752
MTGDGVNDAPALKLADIGVAMGI+GTEV
Sbjct: 728 MTGDGVNDAPALKLADIGVAMGISGTEV 755
|
|
| TAIR|locus:2026580 ECA1 "ER-type Ca2+-ATPase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2236 (792.2 bits), Expect = 8.4e-232, P = 8.4e-232
Identities = 455/748 (60%), Positives = 557/748 (74%)
Query: 6 FPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTL 65
FPAW+ V +C + + V +KGLSS EV KR + YG NEL+K +G +++L+LEQF+DTL
Sbjct: 24 FPAWAKDVAECEEHFVVSREKGLSSDEVLKRHQIYGLNELEKPEGTSIFKLILEQFNDTL 83
Query: 66 VKILLVAAFISFILAYFHSSDSGDSGFEDYXXXXXXXXXXXXXXXXXXWQESNAEKALEA 125
V+ILL AA ISF+LA+F + G+ G + WQE+NAEKALEA
Sbjct: 84 VRILLAAAVISFVLAFFDGDEGGEMGITAFVEPLVIFLILIVNAIVGIWQETNAEKALEA 143
Query: 126 LKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSS 185
LK+IQ + V+RDG V LPA LVPGDIVEL VGDKVPADMRV AL +S+LRVEQ S
Sbjct: 144 LKEIQSQQATVMRDGTKVSSLPAKELVPGDIVELRVGDKVPADMRVVALISSTLRVEQGS 203
Query: 186 LTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQI 245
LTGE+ + K T V ++ ++Q K+ MVFAGTTVVNG+C+C+V +TGMNTEIG++ QI
Sbjct: 204 LTGESEAVSKTTKHVD-ENADIQGKKCMVFAGTTVVNGNCICLVTDTGMNTEIGRVHSQI 262
Query: 246 HDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFE 305
+A+ E DTPL+KKL+EFG LT IGL+C +VW++N + FLSW+ VDGWP N +FSFE
Sbjct: 263 QEAAQHEEDTPLKKKLNEFGEVLTMIIGLICALVWLINVKYFLSWEYVDGWPRNFKFSFE 322
Query: 306 KCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICS 365
KCTYYF+IAVALAVAAIPEGLPAVITTCLALGTRKMAQKNA+VRKLPSVETLGCTTVICS
Sbjct: 323 KCTYYFEIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNALVRKLPSVETLGCTTVICS 382
Query: 366 DKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAK 425
DKTGTLTTNQM+V++ +G + R F+VEGT++DP+DG I DWP MDANLQ +AK
Sbjct: 383 DKTGTLTTNQMAVSKLVAMGSRIGTLRSFNVEGTSFDPRDGKIEDWPMGRMDANLQMIAK 442
Query: 426 ICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSS 485
I A+CNDA V F + G+PTEAALKVLVEKMGFP+ G N+ S D
Sbjct: 443 IAAICNDANVEQSDQQFVSRGMPTEAALKVLVEKMGFPE--GLNEASS---------DGD 491
Query: 486 TVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQL 545
+R CC W++ +R+ATLEFDR RKSM V+V +G+ LLVKG+VE++LERS+H+QL
Sbjct: 492 VLR--CCRLWSELEQRIATLEFDRDRKSMGVMVDSSSGNKLLLVKGAVENVLERSTHIQL 549
Query: 546 ADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYY-SESHPAHKKLLDP 604
DGS LD+ L+L +MS LRCLG AY D +F+ Y SE HPAH++LL+P
Sbjct: 550 LDGSKRELDQYSRDLILQSLRDMSLSALRCLGFAYSDVPSDFATYDGSEDHPAHQQLLNP 609
Query: 605 SCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKL 664
S YS+IES+L+FVG VGLRDPPR V +AI DCR AGI VMVITGDNKSTAEAICR+I +
Sbjct: 610 SNYSSIESNLIFVGFVGLRDPPRKEVRQAIADCRTAGIRVMVITGDNKSTAEAICREIGV 669
Query: 665 FSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVA 724
F +ED++ RS TG EFM + Q L + GG +FSRAEP+HKQEIVR+LKE GEVVA
Sbjct: 670 FEADEDISSRSLTGIEFMDVQD--QKNHLRQTGGLLFSRAEPKHKQEIVRLLKEDGEVVA 727
Query: 725 MTGDGVNDAPALKLADIGVAMGITGTEV 752
MTGDGVNDAPALKLADIGVAMGI+GTEV
Sbjct: 728 MTGDGVNDAPALKLADIGVAMGISGTEV 755
|
|
| ZFIN|ZDB-GENE-020905-1 atp2a1 "ATPase, Ca++ transporting, cardiac muscle, fast twitch 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 1452 (516.2 bits), Expect = 1.0e-148, P = 1.0e-148
Identities = 346/761 (45%), Positives = 473/761 (62%)
Query: 15 QCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAF 74
+CL + V GL+ +V+K + +YG+NEL E+GK +W+LV+EQF+D LV+ILL+AA
Sbjct: 11 ECLAYFGVSESTGLTPEQVKKNQAKYGFNELPAEEGKSIWELVVEQFEDLLVRILLLAAC 70
Query: 75 ISFILAYFHSSDSGDSGFEDYXXXXXXXXXXXXXXXXXXWQESNAEKALEALKKIQCESG 134
ISF+LA+F + G+ + WQE NAE A+EALK+ + E G
Sbjct: 71 ISFVLAWF---EEGEETVTAFVEPFVILLILIANAVVGVWQERNAESAIEALKEYEPEMG 127
Query: 135 KVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPI 193
KV R D V + A +VPGDIVE+ VGDKVPAD+R+ A+++++LRV+QS LTGE++ +
Sbjct: 128 KVYRSDRKSVQRIKAREIVPGDIVEVSVGDKVPADIRITAIRSTTLRVDQSILTGESVSV 187
Query: 194 LKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEES 253
+K T V Q K+NM+F+GT + G + +V+ TG++TEIGKI+ Q+ A+ E+
Sbjct: 188 IKHTESVPDPRAVNQDKKNMLFSGTNIAAGKAIGVVVATGVSTEIGKIRDQM--AATEQE 245
Query: 254 DTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDG--WPANVQFSFEKCTYYF 311
TPL++KLDEFG +L+ I L+C+ VW++N +F D V G W YYF
Sbjct: 246 KTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFN--DPVHGGSW-------IRGAVYYF 296
Query: 312 KIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTL 371
KIAVALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VICSDKTGTL
Sbjct: 297 KIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTL 356
Query: 372 TTNQMSVTEFFTL----GRKTTISRIFHVEGTTYDPKDGGIVD--WP--CYNMDANLQAM 423
TTNQM VT+ F + G T+ + + + G+ Y P +G + P C D L +
Sbjct: 357 TTNQMCVTKMFVIEKVEGESVTLDQ-YDISGSKYTP-EGEVTKNGLPVKCGQFDG-LVEL 413
Query: 424 AKICAVCNDAGV-YCDGP-LFRATGLPTEAALKVLVEKMGF--PDVKGRNKISDTQLAAN 479
A ICA+CND+ + Y + ++ G TE AL LVEKM DV+G +K+ AN
Sbjct: 414 ATICALCNDSSLDYNESKGIYEKVGEATETALCCLVEKMNVFNTDVRGLSKVE----RAN 469
Query: 480 YLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIV------REPTGHNQLLVKGSV 533
CC + K+ TLEF R RKSMSV + P G N++ VKG+
Sbjct: 470 T----------CCAVIKQLMKKDFTLEFSRDRKSMSVYCSPAKASKAPVG-NKMFVKGAP 518
Query: 534 ESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSS--KGLRCLGMAYKDELGEFSDYY 591
E +++R ++V++ + VPL P +++ E + LRCL +A +D
Sbjct: 519 EGVIDRCAYVRVGT-TRVPLTGPVKDKIMAVIKEWGTGRDTLRCLALATRD--------- 568
Query: 592 SESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDN 651
+ P L D + ++ E+DL FVG VG+ DPPR V +I+ CR AGI V++ITGDN
Sbjct: 569 NPLRPEEMNLEDSTKFAEYETDLTFVGCVGMLDPPRKEVVGSIELCRAAGIRVIMITGDN 628
Query: 652 KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQE 711
K TA AICR+I +FS +ED+TGR+FTG+EF L QQ EA+ K ++R EP HK +
Sbjct: 629 KGTAVAICRRIGIFSDDEDVTGRAFTGREFDDLPLPQQREAVRK--ACCYARVEPSHKSK 686
Query: 712 IVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
IV L+ E+ AMTGDGVNDAPALK A+IG+AMG +GT V
Sbjct: 687 IVEFLQGFDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAV 726
|
|
| UNIPROTKB|Q9YGL9 ATP2A3 "Sarcoplasmic/endoplasmic reticulum calcium ATPase 3" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1449 (515.1 bits), Expect = 2.1e-148, P = 2.1e-148
Identities = 353/767 (46%), Positives = 471/767 (61%)
Query: 8 AWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVK 67
A S V+ L + V GLS +V + RE+YG NEL E+ K LW+LVLEQF+D LV+
Sbjct: 4 AHSVPVQDVLSRFGVAESCGLSPEQVRRNREKYGPNELPAEERKSLWELVLEQFEDLLVR 63
Query: 68 ILLVAAFISFILAYFHSSDSGDSGFEDYXXXXXXXXXXXXXXXXXXWQESNAEKALEALK 127
ILL+AAF+SFILA+F + + F + WQE NAE A+EALK
Sbjct: 64 ILLMAAFLSFILAWFEEGEESTTAFVE---PIVIIMILIANAVVGVWQERNAESAIEALK 120
Query: 128 KIQCESGKVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSL 186
+ + E GKV+R D V + A +VPGDIVE+ VGDKVPAD+R+ +++++LRV+QS L
Sbjct: 121 EYEPEMGKVIRADRSGVQRIRARDIVPGDIVEVAVGDKVPADIRIIEIRSTTLRVDQSIL 180
Query: 187 TGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIH 246
TGE+M ++K P+ Q K+NM+F+GT + G V IVI TG+ TEIGKI+ Q+
Sbjct: 181 TGESMSVIKHADPIPDPRAVNQDKKNMLFSGTNIAAGKAVGIVIATGVYTEIGKIRNQMV 240
Query: 247 DASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDG--WPANVQFSF 304
+ E+ TPL++KLDEF +L+ I LVC+ VW++N +F D V G W F
Sbjct: 241 ETEPEK--TPLQQKLDEFSQQLSKVIFLVCIAVWVINISHFS--DPVHGGSW-------F 289
Query: 305 EKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVIC 364
YYFK +VALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VIC
Sbjct: 290 RGAIYYFKTSVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVIC 349
Query: 365 SDKTGTLTTNQMSVTEFFTL----GRKTTISRIFHVEGTTYDPKDGGIV--DWP--CYNM 416
SDKTGTLTTNQMSV F + G + ++ F + G+TY P +G I+ + P C
Sbjct: 350 SDKTGTLTTNQMSVCRMFIMEKVEGTQCSLHE-FSITGSTYAP-EGQILKDEKPVRCGQY 407
Query: 417 DANLQAMAKICAVCNDAGV-YCDGP-LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDT 474
D L +A ICA+CND+ + Y + ++ G TE AL LVEKM D +K+S
Sbjct: 408 DG-LVELATICALCNDSSLDYNESKKVYEKVGEATETALTCLVEKMNVFDTD-TSKLSKV 465
Query: 475 QLAANYLIDSSTVRLGCCEWWTKR-SKRVATLEFDRIRKSMSVIVREPTG--HN----QL 527
+ R C K ++ TLEF R RKSMSV PTG HN ++
Sbjct: 466 E------------RANACNSVIKHLMRKECTLEFSRDRKSMSVYCT-PTGPGHNSAGSKM 512
Query: 528 LVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLS--RHLEMSSKGLRCLGMAYKDELG 585
VKG+ ES++ER +HV++ V PL P + +LS R M + LRCL +A D
Sbjct: 513 FVKGAPESVIERCTHVRVGTAKV-PLTPPVREKILSQIRDWGMGTDTLRCLALATHD--- 568
Query: 586 EFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVM 645
+ E+ H D + ++ E++L FVG VG+ DPPR V +I+ CR AGI V+
Sbjct: 569 --APVQRETMQLH----DSTTFTHYETNLTFVGCVGMLDPPRKEVTSSIEMCRKAGIRVI 622
Query: 646 VITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705
+ITGDNK TA AICR+I +F+ +ED+ G+++TG+EF LS Q +A + + F+R E
Sbjct: 623 MITGDNKGTAVAICRRIGIFTESEDVAGKAYTGREFDELSPEAQRQACRE--ARCFARVE 680
Query: 706 PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
P HK IV L+ E+ AMTGDGVNDAPALK A+IG+AMG +GT V
Sbjct: 681 PAHKSRIVEYLQSFNEITAMTGDGVNDAPALKKAEIGIAMG-SGTAV 726
|
|
| UNIPROTKB|Q93084 ATP2A3 "Sarcoplasmic/endoplasmic reticulum calcium ATPase 3" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 1440 (512.0 bits), Expect = 1.9e-147, P = 1.9e-147
Identities = 345/754 (45%), Positives = 461/754 (61%)
Query: 17 LKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFIS 76
L+ ++V + GLS +V RERYG NEL E+GK LW+LVLEQF+D LV+ILL+AA +S
Sbjct: 13 LRHFSVTAEGGLSPAQVTGARERYGPNELPSEEGKSLWELVLEQFEDLLVRILLLAALVS 72
Query: 77 FILAYFHSSDSGDSGFEDYXXXXXXXXXXXXXXXXXXWQESNAEKALEALKKIQCESGKV 136
F+LA+F + + F + WQE NAE A+EALK+ + E GKV
Sbjct: 73 FVLAWFEEGEETTTAFVE---PLVIMLILVANAIVGVWQERNAESAIEALKEYEPEMGKV 129
Query: 137 LR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILK 195
+R D V + A +VPGDIVE+ VGDKVPAD+R+ +K+++LRV+QS LTGE++ + K
Sbjct: 130 IRSDRKGVQRIRARDIVPGDIVEVAVGDKVPADLRLIEIKSTTLRVDQSILTGESVSVTK 189
Query: 196 GTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDT 255
T + Q K+NM+F+GT + +G V + + TG++TE+GKI+ Q+ A++E T
Sbjct: 190 HTEAIPDPRAVNQDKKNMLFSGTNITSGKAVGVAVATGLHTELGKIRSQM--AAVEPERT 247
Query: 256 PLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAV 315
PL++KLDEFG +L+ AI ++C+ VW++N +F PA+ YYFKIAV
Sbjct: 248 PLQRKLDEFGRQLSHAISVICVAVWVINIGHFAD-------PAHGGSWLRGAVYYFKIAV 300
Query: 316 ALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQ 375
ALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VICSDKTGTLTTNQ
Sbjct: 301 ALAVAAIPEGLPAVITTCLALGTRRMARKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ 360
Query: 376 MSVTEFFTLGRKTTISRIFH---VEGTTYDPKDGGIV--DWP--CYNMDANLQAMAKICA 428
MSV F + S + H + GTTY P +G + D P C D L +A ICA
Sbjct: 361 MSVCRMFVVAEADAGSCLLHEFTISGTTYTP-EGEVRQGDQPVRCGQFDG-LVELATICA 418
Query: 429 VCNDAGV-YCDGP-LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSST 486
+CND+ + Y + ++ G TE AL LVEKM + DT L A ++
Sbjct: 419 LCNDSALDYNEAKGVYEKVGEATETALTCLVEKMN---------VFDTDLQALSRVE--- 466
Query: 487 VRLGCCEWWTKRSKRVA-TLEFDRIRKSMSVIVR----EPTGH-NQLLVKGSVESLLERS 540
R G C K+ R TLEF R RKSMSV PTG +++ VKG+ ES++ER
Sbjct: 467 -RAGACNTVIKQLMRKEFTLEFSRDRKSMSVYCTPTRPHPTGQGSKMFVKGAPESVIERC 525
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKG--LRCLGMAYKDELGEFSDYYSESHPAH 598
S V++ + PL + +L++ + S LRCL +A +D D
Sbjct: 526 SSVRVGSRTA-PLTPTSREQILAKIRDWGSGSDTLRCLALATRDAPPRKEDM-------- 576
Query: 599 KKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAI 658
+L D S + E+DL FVG VG+ DPPR V I C AGI V++ITGDNK TA AI
Sbjct: 577 -ELDDCSKFVQYETDLTFVGCVGMLDPPRPEVAACITRCYQAGIRVVMITGDNKGTAVAI 635
Query: 659 CRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKE 718
CR++ +F ED+ G+++TG+EF LS QQ +A + F+R EP HK IV L+
Sbjct: 636 CRRLGIFGDTEDVAGKAYTGREFDDLSPEQQRQACRT--ARCFARVEPAHKSRIVENLQS 693
Query: 719 MGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
E+ AMTGDGVNDAPALK A+IG+AMG +GT V
Sbjct: 694 FNEITAMTGDGVNDAPALKKAEIGIAMG-SGTAV 726
|
|
| UNIPROTKB|F1RFH9 ATP2A1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 1437 (510.9 bits), Expect = 3.9e-147, P = 3.9e-147
Identities = 352/764 (46%), Positives = 473/764 (61%)
Query: 8 AWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVK 67
A S T E+CL + V GL+ +V++ E+YG NEL E+GK LW+LV+EQF+D LV+
Sbjct: 4 AHSKTTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVR 63
Query: 68 ILLVAAFISFILAYFHSSDSGDSGFEDYXXXXXXXXXXXXXXXXXXWQESNAEKALEALK 127
ILL+AA ISF+LA+F + G+ + WQE NAE A+EALK
Sbjct: 64 ILLLAACISFVLAWF---EEGEETVTAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 128 KIQCESGKVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSL 186
+ + E GKV R D V + A +VPGDIVE+ VGDKVPAD+R+ +K+++LRV+QS L
Sbjct: 121 EYEPEMGKVYRADRKAVQRIKARDIVPGDIVEVAVGDKVPADIRILTIKSTTLRVDQSIL 180
Query: 187 TGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIH 246
TGE++ ++K T PV Q K+NM+F+GT + G + IV TG+NTEIGKI+ Q+
Sbjct: 181 TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKAIGIVATTGVNTEIGKIRDQM- 239
Query: 247 DASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDG--WPANVQFSF 304
A+ E+ TPL++KLDEFG +L+ I L+C+ VW++N +F D V G W
Sbjct: 240 -AATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFN--DPVHGGSW-------I 289
Query: 305 EKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVIC 364
YYFKIAVALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VIC
Sbjct: 290 RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVIC 349
Query: 365 SDKTGTLTTNQMSVTEFFTLGR-KTTISRI--FHVEGTTYDPKDGGIV--DWPCY-NMDA 418
SDKTGTLTTNQMSV + F + + + I + F + G+TY P +G ++ D P
Sbjct: 350 SDKTGTLTTNQMSVCKMFVIDKVEGDICLLNEFSITGSTYAP-EGEVLKNDKPVRAGQYD 408
Query: 419 NLQAMAKICAVCNDAGV-YCDGP-LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQL 476
L +A ICA+CND+ + + + ++ G TE AL LVEKM + RN +S +
Sbjct: 409 GLVELATICALCNDSSLDFNEAKGVYEKVGEATETALTTLVEKMNVFNTDVRN-LSKVE- 466
Query: 477 AANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIV-----REPTGHNQLLVKG 531
AN +S +R + K+ TLEF R RKSMSV R G N++ VKG
Sbjct: 467 RANAC--NSVIR--------QLMKKEFTLEFSRDRKSMSVYCSPAKSRAAVG-NKMFVKG 515
Query: 532 SVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSS--KGLRCLGMAYKDELGEFSD 589
+ E ++ER ++V++ + VP+ P + +LS E + LRCL +A +D + D
Sbjct: 516 APEGVIERCNYVRVGT-TRVPMTGPVKERILSVIKEWGTGRDTLRCLALATRDTPPKRED 574
Query: 590 YYSESHPAHKKLLDPSC-YSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVIT 648
+LD S + E+DL FVGVVG+ DPPR V +I CR AGI V++IT
Sbjct: 575 M----------VLDDSARFMEYETDLTFVGVVGMLDPPRKEVTGSIQLCRDAGIRVIMIT 624
Query: 649 GDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRH 708
GDNK TA AICR+I +F NED+ R++TG+EF L +Q EA + F+R EP H
Sbjct: 625 GDNKGTAIAICRRIGIFGENEDVADRAYTGREFDDLPLPEQREACRR--ACCFARVEPSH 682
Query: 709 KQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
K +IV L+ E+ AMTGDGVNDAPALK A+IG+AMG +GT V
Sbjct: 683 KSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAV 725
|
|
| UNIPROTKB|Q0VCY0 ATP2A1 "Sarcoplasmic/endoplasmic reticulum calcium ATPase 1" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1435 (510.2 bits), Expect = 6.4e-147, P = 6.4e-147
Identities = 352/765 (46%), Positives = 474/765 (61%)
Query: 8 AWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVK 67
A S T E+CL + V GL+ +V++ E+YG NEL E+GK LW+LVLEQF+D LV+
Sbjct: 4 AHSKTTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVLEQFEDLLVR 63
Query: 68 ILLVAAFISFILAYFHSSDSGDSGFEDYXXXXXXXXXXXXXXXXXXWQESNAEKALEALK 127
ILL+AA ISF+LA+F + G+ + WQE NAE A+EALK
Sbjct: 64 ILLLAACISFVLAWF---EEGEETVTAFVEPFVILLILIANAIVGVWQERNAENAIEALK 120
Query: 128 KIQCESGKVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSL 186
+ + E GKV R D V + A +VPGDIVE+ VGDKVPAD+R+ +K+++LRV+QS L
Sbjct: 121 EYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILTIKSTTLRVDQSIL 180
Query: 187 TGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIH 246
TGE++ ++K T PV Q K+NM+F+GT + G + IV TG+ TEIGKI+ Q+
Sbjct: 181 TGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKAIGIVATTGVGTEIGKIRDQM- 239
Query: 247 DASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDG--WPANVQFSF 304
A+ E+ TPL++KLDEFG +L+ I L+C+ VW++N +F D V G W
Sbjct: 240 -AATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFN--DPVHGGSW-------I 289
Query: 305 EKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVIC 364
YYFKIAVALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VIC
Sbjct: 290 RGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVIC 349
Query: 365 SDKTGTLTTNQMSVTEFFTLGR---KTTISRIFHVEGTTYDPKDGGIV--DWPCYNMDAN 419
SDKTGTLTTNQMSV + F + R + F V G+TY P +G ++ D P + +
Sbjct: 350 SDKTGTLTTNQMSVCKMFIIDRIDGDLCLLNEFSVTGSTYAP-EGEVLKNDKPVRSGQYD 408
Query: 420 -LQAMAKICAVCNDAGVYCDGP--LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQL 476
L +A ICA+CND+ + + ++ G TE AL LVEKM + + RN +S +
Sbjct: 409 GLVELATICALCNDSSLDFNETKGIYEKVGEATETALTTLVEKMNVFNTEVRN-LSKVE- 466
Query: 477 AANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIV-----REPTGHNQLLVKG 531
AN +S +R + K+ TLEF R RKSMSV R G N++ VKG
Sbjct: 467 RANAC--NSVIR--------QLMKKEFTLEFSRDRKSMSVYCSPAKSRAAVG-NKMFVKG 515
Query: 532 SVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSS--KGLRCLGMAYKDELGEFSD 589
+ E +++R ++V++ + VP+ P + +LS E + LRCL +A +D
Sbjct: 516 APEGVIDRCNYVRVGT-TRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRD------- 567
Query: 590 YYSESHPAHKKL-LDPSC-YSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVI 647
+ P +++ LD S + E+DL FVGVVG+ DPPR V +I CR AGI V++I
Sbjct: 568 ----TPPKREEMVLDDSTKFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMI 623
Query: 648 TGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPR 707
TGDNK TA AICR+I +F NED+ R++TG+EF L +Q EA + F+R EP
Sbjct: 624 TGDNKGTAIAICRRIGIFGENEDVADRAYTGREFDDLPLAEQREACRR--ACCFARVEPT 681
Query: 708 HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
HK +IV L+ E+ AMTGDGVNDAPALK A+IG+AMG +GT V
Sbjct: 682 HKSKIVEYLQSFDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAV 725
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| ZFIN|ZDB-GENE-040426-702 atp2a2a "ATPase, Ca++ transporting, cardiac muscle, slow twitch 2a" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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Score = 1431 (508.8 bits), Expect = 1.7e-146, P = 1.7e-146
Identities = 344/762 (45%), Positives = 469/762 (61%)
Query: 12 TVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLV 71
+VE+ ++V GL+ +V++ R+++G NEL E+GK +W+LV+EQF+D LV+ILL+
Sbjct: 8 SVEEVYSNFSVNESTGLTLDQVKRNRDKWGPNELPAEEGKSIWELVIEQFEDLLVRILLL 67
Query: 72 AAFISFILAYFHSSDSGDSGFEDYXXXXXXXXXXXXXXXXXXWQESNAEKALEALKKIQC 131
AA ISF+LA+F + G+ + WQE NAE A+EALK+ +
Sbjct: 68 AACISFVLAWF---EEGEETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEP 124
Query: 132 ESGKVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEA 190
E GKV R D V + A +VPGDIVE+ VGDKVPAD+R++A+K+++LRV+QS LTGE+
Sbjct: 125 EMGKVYRQDRKSVQRIKAKDIVPGDIVEVAVGDKVPADIRISAIKSTTLRVDQSILTGES 184
Query: 191 MPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASL 250
+ ++K T PV Q K+NM+F+GT + G + +V+ TG+NTEIGKI+ ++ AS
Sbjct: 185 VSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGKAIGVVVATGVNTEIGKIRDEM--AST 242
Query: 251 EESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDG--WPANVQFSFEKCT 308
E+ TPL++KLDEFG +L+ I L+C+ VWI+N +F D V G W
Sbjct: 243 EQERTPLQQKLDEFGEQLSKVISLICIAVWIINIGHFN--DPVHGGSW-------IRGAV 293
Query: 309 YYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKT 368
YYFKIAVALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGCT+VICSDKT
Sbjct: 294 YYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKT 353
Query: 369 GTLTTNQMSVTEFFTL----GRKTTISRIFHVEGTTYDPKDGGIVD---WPCYNMDANLQ 421
GTLTTNQMSV F + G +++ F + G+TY P+ +D C D L
Sbjct: 354 GTLTTNQMSVCRMFIIDKAEGENCSLTE-FTISGSTYAPEGDVCLDNRIVKCSQYDG-LV 411
Query: 422 AMAKICAVCNDAGV-YCDGP-LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAAN 479
+A ICA+CND+ + + + ++ G TE AL LVEKM D RN
Sbjct: 412 ELATICALCNDSSLDFNESKGVYEKVGEATETALTCLVEKMNVFDTDVRNL--------- 462
Query: 480 YLIDSSTVRLGCCEWWTKR-SKRVATLEFDRIRKSMSVIV---REPTGHNQLLVKGSVES 535
S R C K+ K+ TLEF R RKSMSV + + +++ VKG+ E
Sbjct: 463 ----SKIERANACNAVIKQLMKKEFTLEFSRDRKSMSVYCSPNKAKSSSSKMFVKGAPEG 518
Query: 536 LLERSSHVQLADGSVVPLDEPCWQLMLS--RHLEMSSKGLRCLGMAYKDELGEFSDYYSE 593
+++R ++V++ GS VPL + ++S R LRCL +A +D
Sbjct: 519 VIDRCAYVRVG-GSKVPLTQGIKDKIMSVIREYGTGRDTLRCLALATRD----------- 566
Query: 594 SHPAHKK---LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGD 650
+P K+ L D + ++ ESDL FVG VG+ DPPR V +I CR AGI V++ITGD
Sbjct: 567 -NPLKKEEMVLSDTARFADYESDLTFVGCVGMLDPPRTEVAASIKLCRHAGIRVIMITGD 625
Query: 651 NKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQ 710
NK TA AICR+I +FS +D+ +FTG+EF LS Q EA++ + F+R EP HK
Sbjct: 626 NKGTAVAICRRIGIFSDEDDVHRMAFTGREFDDLSPHAQREAVTV--ARCFARVEPSHKS 683
Query: 711 EIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
+IV L+ E+ AMTGDGVNDAPALK A+IG+AMG +GT V
Sbjct: 684 KIVEFLQGFDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAV 724
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q42883 | ECAP_SOLLC | 3, ., 6, ., 3, ., 8 | 0.8098 | 0.9986 | 0.7175 | N/A | no |
| O23087 | ECA2_ARATH | 3, ., 6, ., 3, ., 8 | 0.7712 | 0.9933 | 0.7096 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_Genewise1_v1.C_LG_XIV1811 | endoplasmic reticulum [ER]-type calcium ATPase (1046 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| fgenesh4_pg.C_LG_VI000504 | hypothetical protein (168 aa) | • | 0.503 | ||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 753 | |||
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 0.0 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 1e-140 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 1e-105 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 1e-100 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 1e-97 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 1e-66 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 2e-61 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 8e-59 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 2e-46 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 3e-45 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 8e-42 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 2e-40 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 2e-37 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 2e-36 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 4e-33 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 8e-30 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 6e-29 | |
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 9e-27 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-25 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 8e-25 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 2e-24 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 2e-24 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 3e-23 | |
| pfam00690 | 69 | pfam00690, Cation_ATPase_N, Cation transporter/ATP | 2e-22 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 4e-21 | |
| smart00831 | 75 | smart00831, Cation_ATPase_N, Cation transporter/AT | 9e-21 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 2e-20 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 1e-19 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 2e-19 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 8e-16 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 6e-15 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 9e-15 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 1e-13 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 1e-13 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 1e-12 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 4e-12 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 1e-11 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 2e-11 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 9e-10 | |
| PRK14010 | 673 | PRK14010, PRK14010, potassium-transporting ATPase | 2e-09 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 2e-06 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 3e-05 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 4e-05 | |
| cd01427 | 139 | cd01427, HAD_like, Haloacid dehalogenase-like hydr | 0.001 | |
| PRK10671 | 834 | PRK10671, copA, copper exporting ATPase; Provision | 0.002 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 863 bits (2232), Expect = 0.0
Identities = 376/701 (53%), Positives = 468/701 (66%), Gaps = 45/701 (6%)
Query: 57 VLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQE 116
VLEQF+D LV+ILL+AA +SF+LA+F + + F VEP VI+LILV NAIVGVWQE
Sbjct: 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAF---VEPFVILLILVANAIVGVWQE 57
Query: 117 SNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKT 176
NAEKA+EALK+ + E KVLRDG + A LVPGDIVEL VGDKVPAD+RV +LKT
Sbjct: 58 RNAEKAIEALKEYESEHAKVLRDGRWSV-IKAKDLVPGDIVELAVGDKVPADIRVLSLKT 116
Query: 177 SSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNT 236
LRV+QS LTGE++ + K T V + Q K+NM+F+GT VV G +V+ TGM+T
Sbjct: 117 --LRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLVVAGKARGVVVRTGMST 174
Query: 237 EIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGW 296
EIGKI+ ++ A E+ DTPL+KKLDEFG L+ IGL+C++VW++N +F
Sbjct: 175 EIGKIRDEMRAA--EQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFND------- 225
Query: 297 PANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVET 356
PA + YYFKIAVALAVAAIPEGLPAVITTCLALGTRKMA+KNAIVRKLPSVET
Sbjct: 226 PALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVET 285
Query: 357 LGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYN- 415
LGCTTVICSDKTGTLTTNQMSV + L ++ F V GTTY P+ G I D
Sbjct: 286 LGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAG 345
Query: 416 -MDANLQAMAKICAVCNDAGVYCD--GPLFRATGLPTEAALKVLVEKMGFPDVKGRNKIS 472
DA L+ +A I A+CND+ + + ++ G TEAALKVLVEKMG P K N +S
Sbjct: 346 GQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATK--NGVS 403
Query: 473 DTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGS 532
+ A GC W + K++ATLEF R RKSMSV+ + TG+ L VKG+
Sbjct: 404 SKRRPAL----------GCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNK-LFVKGA 452
Query: 533 VESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSS-KGLRCLGMAYKDELGEFSDYY 591
E +LER +H+ DG VPL + +LS EM + K LRCL +A+KD +
Sbjct: 453 PEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDL 512
Query: 592 SESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDN 651
L DP+ + IESDL F+GVVG+ DPPR V AI+ CR AGI V++ITGDN
Sbjct: 513 ---------LSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDN 563
Query: 652 KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQE 711
K TAEAICR+I +FS +ED+T +SFTG+EF + +Q A +FSR EP HK E
Sbjct: 564 KETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACR--SAVLFSRVEPSHKSE 621
Query: 712 IVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
+V +L+E GE+VAMTGDGVNDAPALK ADIG+AMG +GTEV
Sbjct: 622 LVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEV 661
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This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
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Score = 583 bits (1504), Expect = 0.0
Identities = 277/738 (37%), Positives = 382/738 (51%), Gaps = 103/738 (13%)
Query: 17 LKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFIS 76
L E GLS EV++R ++YG NEL +EK + L + L QF D + +LLVAA +S
Sbjct: 34 LLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLS 93
Query: 77 FILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKV 136
+ + + V+ +VI+L++V+NA++G QE AEKALEALKK+ KV
Sbjct: 94 AFVGDW---------VDAGVDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKV 144
Query: 137 LRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKG 196
LRDG V +PA LVPGDIV L GD VPAD+R+ L++S L V++S+LTGE++P+ K
Sbjct: 145 LRDGKFVE-IPASELVPGDIVLLEAGDVVPADLRL--LESSDLEVDESALTGESLPVEKQ 201
Query: 197 TSPVFLDDCELQAKE-NMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDT 255
P+ D L NM+F+GTTVV+G IV+ TG TE GKI + + +E T
Sbjct: 202 ALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTK--KEVKT 259
Query: 256 PLRKKLDEFGNRLTTAIGLVCLVVWIMN-YRNFLSWDVVDGWPANVQFSFEKCTYYFKIA 314
PL++KL++ G L ++ +V+++ +R F A
Sbjct: 260 PLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGNGLLES-----------------FLTA 302
Query: 315 VALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTN 374
+ALAVAA+PEGLPAV+T LALG ++MA+ NAIVR L ++ETLG VICSDKTGTLT N
Sbjct: 303 LALAVAAVPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQN 362
Query: 375 QMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAG 434
+M+V + + G I + L A+CN
Sbjct: 363 KMTVKKIYINGGGKDIDDKDLKD-------------------SPALLRFLLAAALCNSVT 403
Query: 435 VYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEW 494
+G G PTE AL EK+GF
Sbjct: 404 PEKNGWYQ--AGDPTEGALVEFAEKLGFSLDLSG-------------------------- 435
Query: 495 WTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLD 554
+A + FD RK MSVIV+ G L VKG+ E +LER + G + PL
Sbjct: 436 LEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI----GELEPLT 491
Query: 555 EPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDL 614
E + + E++S+GLR L +AYK +K + IESDL
Sbjct: 492 EEGLRTLEEAVKELASEGLRVLAVAYK------------KLDRAEKDDE---VDEIESDL 536
Query: 615 VFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGR 674
VF+G+ G+ DPPR V +AI++ R AGI+V +ITGD+ TA AI ++ + E +
Sbjct: 537 VFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIE--AEAESAL 594
Query: 675 SFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAP 734
G E ALS + E + + VF+R P K IV L++ G VVAMTGDGVNDAP
Sbjct: 595 VIDGAELDALSDEELAELVEEL--SVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAP 652
Query: 735 ALKLADIGVAMGITGTEV 752
ALK AD+G+AMG GT+
Sbjct: 653 ALKAADVGIAMGGEGTDA 670
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Length = 917 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 433 bits (1114), Expect = e-140
Identities = 263/752 (34%), Positives = 390/752 (51%), Gaps = 121/752 (16%)
Query: 12 TVEQCLKEYNVKLDKGL-SSREVEKRRERYGWNELDKEKGKPLWQLVLEQF-DDTLVKIL 69
+VE+ + L GL SS+E RR +GWNE D E+ + LW+ L QF + L+ +L
Sbjct: 8 SVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLL 67
Query: 70 LVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKI 129
+ +A IS + +D V + +LI+V VG QE +EK+LEAL K+
Sbjct: 68 IASAVISVFMG----------NIDDAVSITLAILIVV---TVGFVQEYRSEKSLEALNKL 114
Query: 130 QCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGE 189
++R+G L L A LVPGD+V L VGD+VPAD+R+ ++ L +++S+LTGE
Sbjct: 115 VPPECHLIREGKLEHVL-ASTLVPGDLVCLSVGDRVPADLRI--VEAVDLSIDESNLTGE 171
Query: 190 AMPILKGTSPV----FLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQI 245
P+ K T+P+ D L + N+ F GT V G IV+ TG NTE G + K +
Sbjct: 172 TTPVSKVTAPIPAATNGD---LAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMM 228
Query: 246 HDASLEESDTPLRKKLDEFGNRLT----TAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQ 301
++E+ TPL+K +D G +L+ IG++CLV W +++L
Sbjct: 229 Q--AIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQG-KDWLE------------ 273
Query: 302 FSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTT 361
F I+V+LAVAAIPEGLP ++T LALG +M++K AIVRKLPSVETLG
Sbjct: 274 --------MFTISVSLAVAAIPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVN 325
Query: 362 VICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQ 421
VICSDKTGTLT N M+VT+ +T T+ + DG ++ Y + +
Sbjct: 326 VICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLH-GFYTVA--VS 382
Query: 422 AMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYL 481
+ + +CN+A + G PT+ AL L+ K G D++
Sbjct: 383 RILEAGNLCNNAKFRNEADTL--LGNPTDVALIELLMKFGLDDLR--------------- 425
Query: 482 IDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLL-VKGSVESLLERS 540
+ RVA + F RK M+V +++ +KG+ E +L+
Sbjct: 426 ---------------ETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYC 470
Query: 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600
++ Q DG + L + ++ EM+S GLR + A E G+
Sbjct: 471 TYYQKKDGKTLTLTQQQRDVIQEEAAEMASAGLRVIAFASGPEKGQ-------------- 516
Query: 601 LLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR 660
L F+G+VG+ DPPR GV +A+ G+ +++ITGD++ TA +I R
Sbjct: 517 -------------LTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIAR 563
Query: 661 QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720
++ + S T +S +G++ A+ Q + + K VF+RA P HK +IV+ L++ G
Sbjct: 564 RLGMPS----KTSQSVSGEKLDAMDDQQLSQIVPK--VAVFARASPEHKMKIVKALQKRG 617
Query: 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
+VVAMTGDGVNDAPALKLADIGVAMG TGT+V
Sbjct: 618 DVVAMTGDGVNDAPALKLADIGVAMGQTGTDV 649
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 343 bits (882), Expect = e-105
Identities = 228/735 (31%), Positives = 336/735 (45%), Gaps = 103/735 (14%)
Query: 28 LSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDS 87
LSS +E+R + YG NEL ++ K Q+V D + +L VAA +S +L
Sbjct: 62 LSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLG-LPEPGE 120
Query: 88 GDSGFE----DYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLV 143
G + E + V LV V+++VL V +++ + L K Q V+R G
Sbjct: 121 GKADTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQ--KIAVIRGGQ-E 177
Query: 144 PDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLD 203
+ +V GDIV L GD VPAD + SL +++SS+TGE+ PI KG
Sbjct: 178 QQISIHDIVVGDIVSLSTGDVVPADG--VFISGLSLEIDESSITGESDPIKKG------- 228
Query: 204 DCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDE 263
++ + +GT V GS +V G+N+ GK+ ++ A E TPL++KL E
Sbjct: 229 ----PVQDPFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRQA--GEDSTPLQEKLSE 282
Query: 264 FGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTY---YFKIAVALAVA 320
L IG + ++ + V + + + E +F IAV + V
Sbjct: 283 ----LAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVV 338
Query: 321 AIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTE 380
A+PEGLP +T LA +KM + N +VR L + ET+G T ICSDKTGTLT N MSV +
Sbjct: 339 AVPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQ 398
Query: 381 FFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAG--VYCD 438
+ ++ V N+ +++ + N + V
Sbjct: 399 GYIGEQRFN-------------------VRDVLRNVPKHVRNILVEGISLNSSSEEVVDR 439
Query: 439 GPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKR 498
G G TE AL + F + R D VR
Sbjct: 440 GGKRAFIGSKTECAL------LDFGLLLLR--------------DYQEVR--------AE 471
Query: 499 SKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCW 558
K V F+ RK MSV+V+ G + KG+ E +L+ ++G P+ +
Sbjct: 472 EKVVKIYPFNSERKFMSVVVKHSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDK 531
Query: 559 QLMLSRHLEMSSKGLRCLGMAYKD-ELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFV 617
++S LR + +AY+D EF L +
Sbjct: 532 DRCADVIEPLASDALRTICLAYRDFAPEEFPRKDYP-----------------NKGLTLI 574
Query: 618 GVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFT 677
GVVG++DP R GV +A+ +C+ AGI V ++TGDN TA+AI R + + G +
Sbjct: 575 GVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILT----FGGLAME 630
Query: 678 GKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALK 737
GKEF +L + L K +V +R+ P KQ +V MLK+MGEVVA+TGDG NDAPALK
Sbjct: 631 GKEFRSLVYEEMDPILPKL--RVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALK 688
Query: 738 LADIGVAMGITGTEV 752
LAD+G +MGI+GTEV
Sbjct: 689 LADVGFSMGISGTEV 703
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 330 bits (847), Expect = e-100
Identities = 235/771 (30%), Positives = 364/771 (47%), Gaps = 106/771 (13%)
Query: 12 TVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLV 71
++++ ++Y L KGLS+ + R G N L P W Q +L +
Sbjct: 21 SLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWI 80
Query: 72 AAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQC 131
A + F+ +S + ++ +V+ ++++ +QE+ + K +E+ K +
Sbjct: 81 GAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVP 140
Query: 132 ESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAM 191
+ V+RDG + A +V GD+VE+ GD++PAD+R+ + +V+ SSLTGE+
Sbjct: 141 QQALVIRDGE-KMSINAEQVVVGDLVEVKGGDRIPADLRI--ISAQGCKVDNSSLTGESE 197
Query: 192 PILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDAS-L 250
P + SP F + L+ + N+ F T V G+ IV+NTG T +G+I AS L
Sbjct: 198 P--QTRSPEFTHENPLETR-NIAFFSTNCVEGTARGIVVNTGDRTVMGRIASL---ASGL 251
Query: 251 EESDTPLRKKLDEFGNRLT---TAIGLVCLVV-WIMNYRNFLSWDVVDGWPANVQFSFEK 306
E TP+ +++ F + +T +G+ ++ I+ Y W V F
Sbjct: 252 ENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGYT----------WLEAVIF---- 297
Query: 307 CTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSD 366
+ + VA +PEGL A +T CL L ++MA+KN +V+ L +VETLG T+ ICSD
Sbjct: 298 -------LIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSD 350
Query: 367 KTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKI 426
KTGTLT N+M+V + H TT D + G D A A+++I
Sbjct: 351 KTGTLTQNRMTVAHMW-------FDNQIHEADTTED-QSGVSFD----KSSATWLALSRI 398
Query: 427 CAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSST 486
+CN RA + + +L R D +A L+
Sbjct: 399 AGLCN-----------RAVFKAGQENVPIL----------KRAVAGDASESA--LLKCIE 435
Query: 487 VRLGCCEWWTKRSKRVATLEFDRIRK-SMSVIVRE-PTGHNQLLV-KGSVESLLERSSHV 543
+ LG +R+ +V + F+ K +S+ E P LLV KG+ E +LER S +
Sbjct: 436 LCLGSVMEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSI 495
Query: 544 QLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYY--SESHPAHKKL 601
L G PLDE + + +LE+ G R LG F Y E P +
Sbjct: 496 -LIHGKEQPLDEELKEAFQNAYLELGGLGERVLG---------FCHLYLPDEQFPEGFQ- 544
Query: 602 LDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ 661
D + +L FVG++ + DPPR V A+ CR AGI+V+++TGD+ TA+AI +
Sbjct: 545 FDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG 604
Query: 662 IKLFS-GN---EDLTGR----------------SFTGKEFMALSSTQQIEALSKHGGKVF 701
+ + S GN ED+ R G + ++S Q E L H VF
Sbjct: 605 VGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVF 664
Query: 702 SRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
+R P+ K IV + G +VA+TGDGVND+PALK ADIGVAMGI G++V
Sbjct: 665 ARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDV 715
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 325 bits (833), Expect = 1e-97
Identities = 226/803 (28%), Positives = 383/803 (47%), Gaps = 85/803 (10%)
Query: 6 FPAWSWTVEQCLKEY-NVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDT 64
F A+ + E+ + +GL+ E + R + G N L+ + G ++L Q +
Sbjct: 4 FNAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNA 63
Query: 65 LVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALE 124
+ +L++AA ISF D++E VI I+ LN ++G QE AEK ++
Sbjct: 64 MCMVLIIAAAISF-------------AMHDWIEGGVISAIIALNILIGFIQEYKAEKTMD 110
Query: 125 ALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQS 184
+LK + V+R+G + + LVPGDI L GD +PAD+R+ ++T + +++
Sbjct: 111 SLKNLASPMAHVIRNGK-SDAIDSHDLVPGDICLLKTGDTIPADLRL--IETKNFDTDEA 167
Query: 185 SLTGEAMPILKGTSPVFL--DDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQ 242
LTGE++P++K F +D + + N+ F+ + V G I I T +N+EIG I
Sbjct: 168 LLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIA 227
Query: 243 KQIHDAS-----LEESDTPLRKKLDEFGNRLTTAI--GLVCLVVWIMNYRNFLSWDVVDG 295
+ E+ D R+KL+++ ++T + + L V +R V+
Sbjct: 228 AGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILF 287
Query: 296 WPANVQFSFEKCTYYFKI-------AVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIV 348
A + + F + A+ LA++ IPE L AV++ +A+G M+++N IV
Sbjct: 288 CIAIIFAIIVMAAHKFDVDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIV 347
Query: 349 RKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFF------------------TLGRKTTI 390
RKL ++E LG ICSDKTGT+T +M + + G + I
Sbjct: 348 RKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGI 407
Query: 391 SRIFHVEGTTYDPKDGGI----------VDWPCYNMDANL-QAMAKICAVCNDAGVYCDG 439
R E + + D I +D P ++D +L + + A+ N A V+ D
Sbjct: 408 PRFSPYEYSHNEAADQDILKEFKDELKEIDLP-EDIDMDLFIKLLETAALANIATVFKDD 466
Query: 440 PL--FRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTK 497
++A G PTE A+ V +K P + + N D S++ + +
Sbjct: 467 ATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNEN---DQSSLSQHNEKPGSA 523
Query: 498 RSKRVATLEFDRIRKSMSVIVREPTGHN-QLLVKGSVESLLERSSHVQLADG-SVVPLDE 555
+ + +A FD K M+ I + G + KG+ E ++E S DG + PL++
Sbjct: 524 QFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLED 583
Query: 556 PCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLV 615
+L+++ ++++GLR L A K D + K +T ESDL
Sbjct: 584 CDRELIIANMESLAAEGLRVLAFASKS-----FDKADNNDDQLKNETLNR--ATAESDLE 636
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGN------E 669
F+G++G+ DPPR A++ C AGI V ++TGD TA+AI +++ + N E
Sbjct: 637 FLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDE 696
Query: 670 DLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDG 729
+ TG +F ALS ++++ L K V +R P+ K +++ L AMTGDG
Sbjct: 697 IMDSMVMTGSQFDALSD-EEVDDL-KALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDG 754
Query: 730 VNDAPALKLADIGVAMGITGTEV 752
VND+P+LK+A++G+AMGI G++V
Sbjct: 755 VNDSPSLKMANVGIAMGINGSDV 777
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 234 bits (599), Expect = 1e-66
Identities = 118/354 (33%), Positives = 186/354 (52%), Gaps = 48/354 (13%)
Query: 27 GLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSD 86
GL+S E +KR +YG NEL EK L F + L ++ AA I+ L
Sbjct: 1 GLTSAEAKKRLAKYGPNEL-PEKKVSPLLKFLGFFWNPLSWVMEAAAIIAIAL------- 52
Query: 87 SGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDL 146
E++V+ ++I+ +L+LNA +G +E+ A A+EALK+ +VLRDG ++
Sbjct: 53 ------ENWVDFVIILGLLLLNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKWQ-EI 105
Query: 147 PAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCE 206
PA LVPGD+V L +GD VPAD R+ + ++V+Q++LTGE++P+ K T
Sbjct: 106 PASELVPGDVVRLKIGDIVPADCRL--FEGDYIQVDQAALTGESLPVTKKTG-------- 155
Query: 207 LQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGN 266
++ ++G+TV G +V TGMNT GK + S E L+K L + G
Sbjct: 156 -----DIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALV--QSTETGSGHLQKILSKIGL 208
Query: 267 RLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGL 326
L IG++ L+ ++ + E + A+ L V IP +
Sbjct: 209 FLIVLIGVLVLIELVVLFFGRG----------------ESFREGLQFALVLLVGGIPIAM 252
Query: 327 PAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTE 380
PAV++ +A+G ++A+K AIV +L ++E L ++CSDKTGTLT N++S+ E
Sbjct: 253 PAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDE 306
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 205 bits (524), Expect = 2e-61
Identities = 86/258 (33%), Positives = 143/258 (55%), Gaps = 37/258 (14%)
Query: 100 VIVLILVLNAIVGVWQESNAEKALEALKKIQCESG-KVLRDGYLVPDLPAIGLVPGDIVE 158
+I+L++++NA++ +QE A KAL+ALKK+ + V+RDG ++PA LV GDIV
Sbjct: 1 IILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEE-EIPADELVVGDIVL 59
Query: 159 LGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGT 218
L GD+VPAD R+ SL V++S+LTGE++P+ K + + VFAGT
Sbjct: 60 LKPGDRVPADGRI---IEGSLEVDESALTGESLPVEKS-------------RGDTVFAGT 103
Query: 219 TVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLV 278
V++G IV TG +TE+GKI + + +A + + TPL++ LD+ L + + ++
Sbjct: 104 VVLSGELKVIVTATGEDTELGKIARLVEEA--KSAKTPLQRLLDKLAKILVPIVLALAIL 161
Query: 279 VWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGT 338
V+++ + + A+A+ VAA PE LP + LA+G
Sbjct: 162 VFLIWFFRGGDF-----------------LEALLRALAVLVAACPEALPLAVPLALAVGA 204
Query: 339 RKMAQKNAIVRKLPSVET 356
++A+K +V+ L ++ET
Sbjct: 205 GRLAKKGILVKNLSALET 222
|
Length = 222 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 208 bits (531), Expect = 8e-59
Identities = 94/318 (29%), Positives = 155/318 (48%), Gaps = 30/318 (9%)
Query: 100 VIVLILVLNAIVGVWQESNAEKALEALKKIQ--CESGKVLRDGYLVPDLPAIGLVPGDIV 157
I+ ++++ ++ V Q+ AE L +L VLR+G+ +PA LVPGD+V
Sbjct: 1 FILFLVLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGWKE--IPAKDLVPGDVV 58
Query: 158 ELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAG 217
+ G+ VPAD + + S V++S+LTGE+ P+LK + ++VFAG
Sbjct: 59 LVKSGETVPADGVLLS---GSCFVDESNLTGESNPVLKTALK---ETQSGTITGDLVFAG 112
Query: 218 TTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNR-LTTAIGLVC 276
T V G+ + +V TG+ T +G+I + + E+ TPL+ K D N + L+
Sbjct: 113 TYVFGGTLIVVVTPTGILTTVGRIAVVV--KTGFETRTPLQSKRDRLENFIFILFLLLLA 170
Query: 277 LVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLAL 336
L V++ + WD + A A+ + V +P LPA +T LA+
Sbjct: 171 LAVFLYLFIRG--WDPNSIFKA------------LLRALIVLVIVVPPALPAAVTVALAV 216
Query: 337 GTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFH- 395
G ++A+K +VR L ++E LG +CSDKTGTLT N+M++ + G K S
Sbjct: 217 GDARLAKKGILVRNLNALEELGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDNSSSLVA 276
Query: 396 --VEGTTYDPKDGGIVDW 411
+ DP + ++
Sbjct: 277 CDNNYLSGDPMEKALLKS 294
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 177 bits (451), Expect = 2e-46
Identities = 108/387 (27%), Positives = 191/387 (49%), Gaps = 42/387 (10%)
Query: 14 EQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAA 73
E L++ V + GL++ EV +R +G N+ +EK P +L++ F++ + IL +
Sbjct: 21 ETLLRKLGV-HETGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLM 79
Query: 74 FISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCES 133
+S++ +D ++I L+++ + ++G QES AE+A ALK + +
Sbjct: 80 GVSYLT-------------DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNT 126
Query: 134 GKVLRDGY-----LVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTG 188
VLR + ++P LVPGD++EL GD +PAD RV + L + QS+LTG
Sbjct: 127 ATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARV--ISARDLFINQSALTG 184
Query: 189 EAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDA 248
E++P+ K D E+ +EN+ F GT V++G +V+ TG +T G +
Sbjct: 185 ESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIAA--- 241
Query: 249 SLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCT 308
+ T K + L + ++ VV ++N W A
Sbjct: 242 TERRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKGDW-----LEA---------- 286
Query: 309 YYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKT 368
F A+A+AV PE LP ++++ LA G M++K IV++L +++ G ++C+DKT
Sbjct: 287 --FLFALAVAVGLTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKT 344
Query: 369 GTLTTNQMSVTEFFTLGRKTTISRIFH 395
GTLT +++ + + +T+ R+
Sbjct: 345 GTLTQDKIELEKHIDSSGETS-ERVLK 370
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 170 bits (432), Expect = 3e-45
Identities = 94/341 (27%), Positives = 144/341 (42%), Gaps = 100/341 (29%)
Query: 422 AMAKICAVCNDAGV--------YCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISD 473
+AK + + Y TG T+ K+ ++ + K N S
Sbjct: 220 RLAKKGILVRNLNALEELGKVDYL---CSDKTGTLTKN--KMTLQGVYIDGGKEDNSSSL 274
Query: 474 TQLAANYL----IDSSTVR----LGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHN 525
NYL ++ + ++ +G + K K + F + K MSVIV P G +
Sbjct: 275 VACDNNYLSGDPMEKALLKSAELVGKADKGNKEYKILDVFPFSSVLKRMSVIVETPDGSD 334
Query: 526 QLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELG 585
L VKG+ E +LER ++ +E LE++ +GLR L A K+
Sbjct: 335 LLFVKGAPEFILERCNN----------YEEKY--------LELARQGLRVLAFASKE--- 373
Query: 586 EFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVM 645
+E DL F+G++ DP R + I++ + AGI+V+
Sbjct: 374 ------------------------LEDDLEFLGLITFEDPLRPDAKETIEELKAAGIKVV 409
Query: 646 VITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705
+ITGDN TA+AI +++ + VF+R
Sbjct: 410 MITGDNVLTAKAIAKELGID----------------------------------VFARVS 435
Query: 706 PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746
P K +IV L++ G +VAMTGDGVNDAPALK AD+G+AMG
Sbjct: 436 PEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAMG 476
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 164 bits (416), Expect = 8e-42
Identities = 179/788 (22%), Positives = 289/788 (36%), Gaps = 169/788 (21%)
Query: 27 GLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSD 86
GL++ ++ +R+ +YG NE++ +L+ E+ L + F S IL
Sbjct: 139 GLTTGDIAQRKAKYGKNEIEIPV-PSFLELLKEEV---LHPFYVFQVF-SVILWLLD--- 190
Query: 87 SGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDL 146
E Y L IV + + + V+Q + L + S V+R+G V +
Sbjct: 191 ------EYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVHKPQ-SVIVIRNGKWVT-I 242
Query: 147 PAIGLVPGDIVELGV--GDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDD 204
+ LVPGDIV + +P D L + S V +S LTGE++P+LK P DD
Sbjct: 243 ASDELVPGDIVSIPRPEEKTMPCDS---VLLSGSCIVNESMLTGESVPVLKFPIPDNGDD 299
Query: 205 CE-LQAKE----NMVFAGTTVV-------NGSCVCIVINTGMNTEIGKIQKQIHDASLEE 252
E L E +++F GT ++ + C+ IV+ TG +T G++ + I L
Sbjct: 300 DEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSI----LYP 355
Query: 253 SDTPLRKKLDEFGNRLTTAIGLVC--LVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYY 310
+ D F L A+ + + I ++ + +
Sbjct: 356 KPRVFKFYKDSFKFILFLAVLALIGFIYTIIELIKD----------GRPLGKIILRSLDI 405
Query: 311 FKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLP-SVETLGCTTVICSDKTG 369
I V P LPA ++ + ++ K I P + G V C DKTG
Sbjct: 406 ITIVV-------PPALPAELSIGINNSLARLK-KKGIFCTSPFRINFAGKIDVCCFDKTG 457
Query: 370 TLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAV 429
TLT + + + G V+G + + + IV + K A
Sbjct: 458 TLTEDGLDL-----RG----------VQGLSGNQEFLKIVTEDSSLKPSIT---HKALAT 499
Query: 430 CNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRL 489
C+ + +G L G P + K + E G+ + T + A D L
Sbjct: 500 CH-SLTKLEGKL---VGDPLD---KKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQEL 552
Query: 490 GCCEWWTKRSKRVATLEFDRIRKSMSVIVREPT-GHNQLLVKGSVESLLERSSHVQLADG 548
+ +F + MSVIV VKG+ E++ S
Sbjct: 553 SI----------IRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPET---- 598
Query: 549 SVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYS 608
VP D Q +L + +G R L +AYK EL +K D S
Sbjct: 599 --VPSDY---QEVLKS---YTREGYRVLALAYK-ELP---------KLTLQKAQDLS-RD 639
Query: 609 TIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTA-------EAICRQ 661
+ES+L F+G + +P + + I + + A I ++ITGDN TA +
Sbjct: 640 AVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPS 699
Query: 662 IKLFSGNEDLTGRS------------------------------------------FTGK 679
L + +GK
Sbjct: 700 NTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGK 759
Query: 680 EFMAL--SSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALK 737
F L S + + L H VF+R P K+ +V +L+++ V M GDG ND ALK
Sbjct: 760 AFAVLQAHSPELLLRLLSH-TTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALK 818
Query: 738 LADIGVAM 745
AD+G+++
Sbjct: 819 QADVGISL 826
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 159 bits (403), Expect = 2e-40
Identities = 103/360 (28%), Positives = 178/360 (49%), Gaps = 57/360 (15%)
Query: 27 GLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSD 86
GL+ EVE RE++G NEL +K P W + + + +L + IS+
Sbjct: 67 GLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYAT------- 119
Query: 87 SGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLR------DG 140
ED VI L++ ++ ++ QE+ + KA +ALK + + VLR +
Sbjct: 120 ------EDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGEN 173
Query: 141 YLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILK----- 195
+ ++P LVPGDI++L GD +PAD+R+ L+ L V Q+SLTGE++P+ K
Sbjct: 174 GWL-EIPIDQLVPGDIIKLAAGDMIPADLRI--LQARDLFVAQASLTGESLPVEKFATTR 230
Query: 196 ---GTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEE 252
++P+ D + F GT VV+G+ +VI TG NT G++ ++ + +
Sbjct: 231 QPEHSNPLECD--------TLCFMGTNVVSGTAQAVVIATGANTWFGQLAGRV--SEQDS 280
Query: 253 SDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFK 312
++ + L + ++ VV ++N + D W A
Sbjct: 281 EPNAFQQGISRVSWLLIRFMLVMAPVVLLIN-----GYTKGDWWEA------------AL 323
Query: 313 IAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLT 372
A+++AV PE LP ++T+ LA G K++++ IV++L +++ G ++C+DKTGTLT
Sbjct: 324 FALSVAVGLTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLT 383
|
Length = 902 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 150 bits (380), Expect = 2e-37
Identities = 115/390 (29%), Positives = 186/390 (47%), Gaps = 70/390 (17%)
Query: 13 VEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVA 72
+E+ L N GL+ + +R +RYG NE+ EK +L+ F++ + +L+V
Sbjct: 32 LEETLANLNTHRQ-GLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVL 90
Query: 73 AFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCE 132
A ISF Y+ G+ D ++I+ +++L+ ++ WQE + KA EALK +
Sbjct: 91 AAISFFTDYWLPLRRGEE--TDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRT 148
Query: 133 SGKVLRDGY-----LVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLT 187
+ VLR G+ + ++P LVPGDIV L GD +PAD+R+ +++ L + Q+ LT
Sbjct: 149 TATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRL--IESRDLFISQAVLT 206
Query: 188 GEAMPI----------LKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTE 237
GEA+P+ K + D+ L N+ F GT VV+G+ +V+ TG T
Sbjct: 207 GEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVATGSRTY 266
Query: 238 IGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIG--------------LVCL-VVWIM 282
G + K I G R TA LV + VV ++
Sbjct: 267 FGSLAKSI------------------VGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLI 308
Query: 283 NYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMA 342
N F D ++ A+A+AV PE LP ++++ LA G MA
Sbjct: 309 N--GFTKGDWLEA---------------LLFALAVAVGLTPEMLPMIVSSNLAKGAIAMA 351
Query: 343 QKNAIVRKLPSVETLGCTTVICSDKTGTLT 372
++ +V++L +++ G V+C+DKTGTLT
Sbjct: 352 RRKVVVKRLNAIQNFGAMDVLCTDKTGTLT 381
|
Length = 903 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 147 bits (372), Expect = 2e-36
Identities = 79/250 (31%), Positives = 127/250 (50%), Gaps = 31/250 (12%)
Query: 498 RSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPC 557
R +++ + FD R+ MSV+V E T H+QL+ KG++E +L S V+ G +VPLD+
Sbjct: 440 RWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHN-GEIVPLDDI- 497
Query: 558 WQLMLSRHL--EMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTI-ESDL 614
L + + ++ +GLR + +A K PA + Y ESDL
Sbjct: 498 -MLRRIKRVTDTLNRQGLRVVAVATKY------------LPARE-----GDYQRADESDL 539
Query: 615 VFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGR 674
+ G + DPP+ A+ + +G+ V ++TGD++ A +C ++ L +G
Sbjct: 540 ILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDAG------E 593
Query: 675 SFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAP 734
G + LS + + +F+R P HK+ IV +LK G VV GDG+NDAP
Sbjct: 594 VLIGSDIETLSDDELANLAERT--TLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAP 651
Query: 735 ALKLADIGVA 744
AL+ ADIG++
Sbjct: 652 ALRAADIGIS 661
|
Length = 902 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 136 bits (345), Expect = 4e-33
Identities = 73/248 (29%), Positives = 119/248 (47%), Gaps = 25/248 (10%)
Query: 498 RSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPC 557
R K+V + FD R+ +SV+V +L+ KG+VE +L +H + G+VV L E
Sbjct: 405 RWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRF-GGAVVTLSESE 463
Query: 558 WQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFV 617
+ EM+ +G+R + +A K +D+ E L+
Sbjct: 464 KSELQDMTAEMNRQGIRVIAVATKTLKVGEADFTKTD----------------EEQLIIE 507
Query: 618 GVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFT 677
G +G DPP+ +AI GI V V+TGDN+ IC+++ + + +
Sbjct: 508 GFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAND------FLL 561
Query: 678 GKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALK 737
G + LS + L K+ +F+R P K I+ +LK+ G V GDG+NDAPAL+
Sbjct: 562 GADIEELSDEELARELRKY--HIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALR 619
Query: 738 LADIGVAM 745
AD+G+++
Sbjct: 620 KADVGISV 627
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 8e-30
Identities = 79/254 (31%), Positives = 126/254 (49%), Gaps = 26/254 (10%)
Query: 500 KRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQ 559
++V L FD +R+ +SV+V + G + L+ KG+VE +L ++HV+ +V PLDE +
Sbjct: 440 RKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVR-DGDTVRPLDEARRE 498
Query: 560 LMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTI-ESDLVFVG 618
+L+ ++ G R L +A + E+ YST E DLV G
Sbjct: 499 RLLALAEAYNADGFRVLLVATR-EIPG----GESRAQ----------YSTADERDLVIRG 543
Query: 619 VVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTG 678
+ DPP+ AI R G+ V V+TGDN ICR++ L G E L G
Sbjct: 544 FLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPG-EPLLGT---- 598
Query: 679 KEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKL 738
E A+ + + VF++ P K +++ L+ G V GDG+NDAPAL+
Sbjct: 599 -EIEAMDDAA-LAREVEER-TVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRD 655
Query: 739 ADIGVAMGITGTEV 752
AD+G+++ +G ++
Sbjct: 656 ADVGISVD-SGADI 668
|
Length = 903 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 121 bits (306), Expect = 6e-29
Identities = 72/317 (22%), Positives = 136/317 (42%), Gaps = 48/317 (15%)
Query: 69 LLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKK 128
LL+A ++ I AY +E +++ + +L + + A AL AL
Sbjct: 3 LLMA--LATIAAYAMG---------LVLEGALLLFLFLLGETLEERAKGRASDALSALLA 51
Query: 129 IQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTG 188
+ + +VL+ ++P L GDIV + G+++P D V + S V++S+LTG
Sbjct: 52 LAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVV--ISGESE-VDESALTG 108
Query: 189 EAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDA 248
E+MP+ K + + VFAGT +GS V G ++ + +I + + +A
Sbjct: 109 ESMPVEK-------------KEGDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVELVEEA 155
Query: 249 SLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCT 308
+ S P+++ D + A+ + L+ ++ W + A +
Sbjct: 156 --QSSKAPIQRLADRIASYYVPAVLAIALLTFV-------VWLALGALGA-----LYR-- 199
Query: 309 YYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKT 368
A+A+ V A P L + + A++ +++ ++E L + DKT
Sbjct: 200 -----ALAVLVVACPCALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKT 254
Query: 369 GTLTTNQMSVTEFFTLG 385
GTLTT + +V + L
Sbjct: 255 GTLTTGKPTVVDIEPLD 271
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 9e-27
Identities = 135/482 (28%), Positives = 195/482 (40%), Gaps = 105/482 (21%)
Query: 346 AIVRKLPSVETLGCTTVICSDKTGTLTTNQM----------SVTEFFT---------LGR 386
A VR E LG I SDKTGTLT N M S + FT LG
Sbjct: 345 ASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGS 404
Query: 387 KTTISRIFHVEGTTYDPKDGGIVD--WPCYNMDANLQAMAKICAVCNDA--GVYCDGPL- 441
VE + D +VD + A+C+ DGP
Sbjct: 405 YVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEE 464
Query: 442 --FRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRS 499
++A P EAAL +GF T + + LI+ TK
Sbjct: 465 ITYQAAS-PDEAALVKAARDVGF------VFFERTPKSISLLIEMHGE--------TKEY 509
Query: 500 KRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQ 559
+ + LEF+ RK MSVIVR P G +LL KG+ + +R L+ G +E
Sbjct: 510 EILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGADTVIFKR-----LSSGGNQVNEE---- 560
Query: 560 LMLSRHLE-MSSKGLRCLGMAYKD----ELGEFSDYYSESHPA---HKKLLDPSCYSTIE 611
HLE +S+GLR L +AY++ E E+++ Y+E+ A ++ LD +IE
Sbjct: 561 --TKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLD-VVAESIE 617
Query: 612 SDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAI---CR-------Q 661
DL+ +G + D + GV + I+ R AGI++ V+TGD TA I CR Q
Sbjct: 618 KDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQ 677
Query: 662 IKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHG-------GKVFS------------ 702
I + S + D T +F ++++ L G GK
Sbjct: 678 IVITSDSLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFL 737
Query: 703 ------------RAEPRHKQEIVRMLKEM-GEVVAMTGDGVNDAPALKLADIGVAMGITG 749
R P K ++VR++K+ G+ GDG ND ++ AD+GV GI+G
Sbjct: 738 QLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGV--GISG 795
Query: 750 TE 751
E
Sbjct: 796 KE 797
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 110 bits (278), Expect = 2e-25
Identities = 78/337 (23%), Positives = 141/337 (41%), Gaps = 60/337 (17%)
Query: 62 DDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE- 120
DTL+ + A+ ++A + + + +++ +L +G W E A+
Sbjct: 20 MDTLIALGTTVAYGYSLVALLANQVLTGLHVHTFFDASAMLITFIL---LGRWLEMLAKG 76
Query: 121 ---KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTS 177
AL L K+Q + +L D + ++P L PGDIV + G+K+P D V ++
Sbjct: 77 RASDALSKLAKLQPSTATLLTDDGEIEEVPVELLQPGDIVRVLPGEKIPVDGTV--IEGE 134
Query: 178 SLRVEQSSLTGEAMPILK--GTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMN 235
S V++S +TGE++P+ K G V AGT GS V TG +
Sbjct: 135 S-EVDESLVTGESLPVPKKVGDP---------------VIAGTVNGTGSLVVRATATGED 178
Query: 236 TEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTT-------AIGLVCLVVWIMNYRNFL 288
T + +I + + A ++ + +++ AI L+ V+W++
Sbjct: 179 TTLAQIVRLVRQAQQSKA------PIQRLADKVAGYFVPVVIAIALITFVIWLI------ 226
Query: 289 SWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIV 348
A+ F+ E +AV + + A P L T +A+ T A+ ++
Sbjct: 227 -------LGADFVFALE-------VAVTVLIIACPCALGLATPTVIAVATGLAAKNGVLI 272
Query: 349 RKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLG 385
+ ++E + DKTGTLT + +VT+ G
Sbjct: 273 KDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFG 309
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 109 bits (276), Expect = 8e-25
Identities = 53/137 (38%), Positives = 71/137 (51%), Gaps = 34/137 (24%)
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRS 675
VGV+ L D R +AI + GI+V+++TGDN+ TAEAI +++ +
Sbjct: 528 LVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGI----------- 576
Query: 676 FTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPA 735
E A E L P K EIVR L+ G VAM GDG+NDAPA
Sbjct: 577 ---DEVRA-------ELL------------PEDKAEIVRELQAEGRKVAMVGDGINDAPA 614
Query: 736 LKLADIGVAMGITGTEV 752
L AD+G+AMG +GT+V
Sbjct: 615 LAAADVGIAMG-SGTDV 630
|
Length = 713 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 108 bits (273), Expect = 2e-24
Identities = 59/181 (32%), Positives = 88/181 (48%), Gaps = 37/181 (20%)
Query: 567 EMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPP 626
E++S+G R LG+A DE G + F+G++ L DPP
Sbjct: 411 ELASRGYRALGVARTDEEGRWH---------------------------FLGLLPLFDPP 443
Query: 627 RGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGK---EFMA 683
R + I+ R G+EV ++TGD+ + A+ R++ L G T + +
Sbjct: 444 RHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGL--GTNIYTADVLLKGDNRDDLP 501
Query: 684 LSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743
+ +E G F+ P HK EIV +L++ G +V MTGDGVNDAPALK AD+G+
Sbjct: 502 SGLGEMVE---DADG--FAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGI 556
Query: 744 A 744
A
Sbjct: 557 A 557
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 2e-24
Identities = 79/331 (23%), Positives = 137/331 (41%), Gaps = 58/331 (17%)
Query: 63 DTLVKI-LLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQE----S 117
DTLV + + A S F Y E +++ L L +G + E
Sbjct: 150 DTLVALATIGAYAYSLYATLFP----------VYFEEAAMLIFLFL---LGRYLEARAKG 196
Query: 118 NAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTS 177
A +A+ AL + ++ V+R ++P + GDIV + G+++P D V + S
Sbjct: 197 RARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVV--VSGS 254
Query: 178 SLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTE 237
S V++S LTGE++P+ K + VFAGT ++GS V G +T
Sbjct: 255 SS-VDESMLTGESLPVEKK-------------PGDEVFAGTVNLDGSLTIRVTRVGADTT 300
Query: 238 IGKIQKQIHDASLEESDTPLRKKLDEFGNRLT-TAIGLVCLVVWIMNYRNFLSWDVVDGW 296
+ +I + + +A + S P+++ D + + + L F W + G
Sbjct: 301 LARIIRLVEEA--QSSKAPIQRLADRVASYFVPVVLVIAALT--------FALWPLFGGG 350
Query: 297 PANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLAL--GTRKMAQKNAIVRKLPSV 354
A+A+ V A P L + T A+ G + A++ +++ ++
Sbjct: 351 DWE---------TALYRALAVLVIACPCAL--GLATPTAILVGIGRAARRGILIKGGEAL 399
Query: 355 ETLGCTTVICSDKTGTLTTNQMSVTEFFTLG 385
E L + DKTGTLT + VT+ L
Sbjct: 400 ERLAKVDTVVFDKTGTLTEGKPEVTDVVALD 430
|
Length = 713 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 103 bits (260), Expect = 3e-23
Identities = 68/293 (23%), Positives = 130/293 (44%), Gaps = 41/293 (13%)
Query: 94 DYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVP 153
+Y+E +++L+ + + + A +AL+AL ++ ++ +VLR G L ++ L
Sbjct: 17 EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLE-EVAVEELKV 75
Query: 154 GDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENM 213
GD+V + G++VP D V + ++ V++S+LTGE++P+ K A +
Sbjct: 76 GDVVVVKPGERVPVDGVVLSGTST---VDESALTGESVPVEK-------------APGDE 119
Query: 214 VFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIG 273
VFAG ++G +V ++ I KI + +A + ++ +D F T +
Sbjct: 120 VFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEA--QSRKAKTQRFIDRFARYYTPVVL 177
Query: 274 LVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTC 333
+ L +W+ V ++ ++ A+ L V A P L VI+
Sbjct: 178 AIALAIWL------------------VPGLLKRWPFWVYRALVLLVVASPCAL--VISAP 217
Query: 334 LAL--GTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTL 384
A A+ +++ ++E L + DKTGTLTT + V +
Sbjct: 218 AAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA 270
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|201397 pfam00690, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 91.1 bits (227), Expect = 2e-22
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 8 AWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVK 67
+ +VE+ L L+KGL+ E E+R E+YG NEL ++K K LW++ L QF D LV
Sbjct: 1 WHTLSVEEVLARLGTDLEKGLTEAEAEERLEKYGPNELPEKKPKSLWKIFLRQFKDPLVI 60
Query: 68 ILLVAAFIS 76
ILL+AA +S
Sbjct: 61 ILLIAAIVS 69
|
Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. Length = 69 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 97.7 bits (244), Expect = 4e-21
Identities = 50/144 (34%), Positives = 74/144 (51%), Gaps = 35/144 (24%)
Query: 610 IESDLVFVGVVGLRDPPRGGVDKAIDDCRGAG-IEVMVITGDNKSTAEAICRQIKLFSGN 668
+ D +GV+ LRD R +AI + AG I+++++TGDN+S AEA+ ++ G
Sbjct: 369 VAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAEL----GI 424
Query: 669 EDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGD 728
++ V + P K IV+ L+E G VVAM GD
Sbjct: 425 DE-----------------------------VHAELLPEDKLAIVKELQEEGGVVAMVGD 455
Query: 729 GVNDAPALKLADIGVAMGITGTEV 752
G+NDAPAL AD+G+AMG G++V
Sbjct: 456 GINDAPALAAADVGIAMG-AGSDV 478
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|214842 smart00831, Cation_ATPase_N, Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Score = 86.5 bits (215), Expect = 9e-21
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 9 WSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKI 68
+ ++E+ L+ L+KGLSS E +R ERYG NEL K L QF + L+ I
Sbjct: 5 HALSLEEVLERLQTDLEKGLSSEEAARRLERYGPNELPPPKKTSPLLRFLRQFHNPLIYI 64
Query: 69 LLVAAFISFIL 79
LL AA +S +L
Sbjct: 65 LLAAAVLSALL 75
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases. Length = 75 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 95.4 bits (238), Expect = 2e-20
Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 34/136 (25%)
Query: 617 VGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSF 676
GV+ L D + + I + GIE +++TGDN+ TA+A+ +++ G E+
Sbjct: 406 AGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKEL----GIEN------ 455
Query: 677 TGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPAL 736
V + P K +++ L+E G+VVAM GDG+NDAPAL
Sbjct: 456 -----------------------VRAEVLPDDKAALIKKLQEKGKVVAMVGDGINDAPAL 492
Query: 737 KLADIGVAMGITGTEV 752
AD+G+A+G GT+V
Sbjct: 493 AQADVGIAIG-AGTDV 507
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 83.4 bits (207), Expect = 1e-19
Identities = 34/119 (28%), Positives = 45/119 (37%), Gaps = 31/119 (26%)
Query: 428 AVCNDAGVYC--DGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSS 485
A+CNDA + G PTE+AL V EK+G
Sbjct: 1 ALCNDAKFGENEEKNGGEIIGDPTESALLVFAEKLG------------------------ 36
Query: 486 TVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLL-VKGSVESLLERSSHV 543
E R RVA + F+ RK MS + + L VKG+ E +LER S +
Sbjct: 37 ----IDVEELRARYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAPERILERCSTI 91
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 92.0 bits (229), Expect = 2e-19
Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 34/138 (24%)
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIE-VMVITGDNKSTAEAICRQIKLFSGNEDLTGR 674
++G + L D PR +AI + + GIE V+++TGD ++ AE + R++ G ++
Sbjct: 353 YLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVAREL----GIDE---- 404
Query: 675 SFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAP 734
V + P K EIV+ L+E VAM GDG+NDAP
Sbjct: 405 -------------------------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAP 439
Query: 735 ALKLADIGVAMGITGTEV 752
AL AD+G+AMG +G++V
Sbjct: 440 ALAAADVGIAMGASGSDV 457
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 81.2 bits (201), Expect = 8e-16
Identities = 45/136 (33%), Positives = 65/136 (47%), Gaps = 34/136 (25%)
Query: 615 VFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGR 674
+GV+ L+D + G+ + + R GI+ ++ITGDN TA AI + +
Sbjct: 437 RILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV---------- 486
Query: 675 SFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAP 734
+F+A A P K ++R + G +VAMTGDG NDAP
Sbjct: 487 ----DDFIA-------------------EATPEDKLALIRQEQAEGRLVAMTGDGTNDAP 523
Query: 735 ALKLADIGVAMGITGT 750
AL AD+GVAM +GT
Sbjct: 524 ALAQADVGVAMN-SGT 538
|
Length = 681 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 78.3 bits (194), Expect = 6e-15
Identities = 47/135 (34%), Positives = 67/135 (49%), Gaps = 34/135 (25%)
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRS 675
+GV+ L+D + G+ + + R GI+ ++ITGDN TA AI + +G +D
Sbjct: 436 VLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAE----AGVDD----- 486
Query: 676 FTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPA 735
F+A A P K ++R + G +VAMTGDG NDAPA
Sbjct: 487 -----FLA-------------------EATPEDKLALIRQEQAEGRLVAMTGDGTNDAPA 522
Query: 736 LKLADIGVAMGITGT 750
L AD+GVAM +GT
Sbjct: 523 LAQADVGVAMN-SGT 536
|
Length = 679 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 78.1 bits (193), Expect = 9e-15
Identities = 75/276 (27%), Positives = 121/276 (43%), Gaps = 45/276 (16%)
Query: 114 WQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAA 173
+ S A + + AL + E+ LRDG ++ L PGD++E+ G ++PAD
Sbjct: 225 YAASRARRGVSALMALVPETATRLRDGERE-EVAIADLRPGDVIEVAAGGRLPAD---GK 280
Query: 174 LKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTG 233
L + ++S+LTGE++P+ E E V AG T V+ V++
Sbjct: 281 LLSPFASFDESALTGESIPV------------ERATGEK-VPAGATSVDRLVTLEVLSEP 327
Query: 234 MNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFL-SWDV 292
+ I +I I +A EE P+ + +D F T AI LV L+V ++ F W
Sbjct: 328 GASAIDRILHLIEEA--EERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLFAAPWQ- 384
Query: 293 VDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGL----PAVITTCLALGTRKMAQKNAIV 348
+ ++ + L + P L PA IT+ LA R + A++
Sbjct: 385 ---------------EWIYR-GLTLLLIGCPCALVISTPAAITSGLAAAAR----RGALI 424
Query: 349 RKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTL 384
+ ++E LG T + DKTGTLT + VT+
Sbjct: 425 KGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPA 460
|
Length = 741 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 1e-13
Identities = 48/134 (35%), Positives = 69/134 (51%), Gaps = 34/134 (25%)
Query: 618 GVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFT 677
GV+ L+D +GG+ + R GI+ ++ITGDN+ TA AI + +G +D
Sbjct: 439 GVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAE----AGVDD------- 487
Query: 678 GKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALK 737
F+A A P K ++R + G++VAMTGDG NDAPAL
Sbjct: 488 ---FIA-------------------EATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALA 525
Query: 738 LADIGVAMGITGTE 751
AD+GVAM +GT+
Sbjct: 526 QADVGVAMN-SGTQ 538
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 74.5 bits (183), Expect = 1e-13
Identities = 78/306 (25%), Positives = 126/306 (41%), Gaps = 75/306 (24%)
Query: 506 EFDRIRKSMSVIVREPTGHNQLLVKG---SVESLLERSSHVQLADGSVVPLDEPCWQLML 562
EFD RK MSVI+ P ++ VKG S+ S+++RS ++ + +
Sbjct: 610 EFDSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRAT------------- 656
Query: 563 SRHLE-MSSKGLRCLGMAYKDELG-EFSDYYSESHPAHKKLLDPSCY-----STIESDLV 615
HL SS GLR L + ++ EF ++ A L+ + S +E++L
Sbjct: 657 EAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLT 716
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAI----------CRQIKLF 665
+G + D + GV +AI+ R AGI+V V+TGD + TA +I QI +
Sbjct: 717 ILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIIIN 776
Query: 666 SGNEDLTGRSF-----TGKEFMALSSTQQ------------------------------- 689
S +++ +S K+ +S Q
Sbjct: 777 SNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELE 836
Query: 690 ---IEALSKHGGKVFSRAEPRHKQEIVRMLKE-MGEVVAMTGDGVNDAPALKLADIGVAM 745
+ SK + R P K IV ++K ++ GDG ND +++AD+GV
Sbjct: 837 EQLFQLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGV-- 894
Query: 746 GITGTE 751
GI+G E
Sbjct: 895 GISGQE 900
|
Length = 1178 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 66.5 bits (162), Expect = 1e-12
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 22/132 (16%)
Query: 609 TIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGN 668
DLV +G++ L DP G +A+ + + AGI++ ++TGDN+ TA AI R + LF
Sbjct: 78 VAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIARLLGLF--- 134
Query: 669 EDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGD 728
+ + + + + K K+F + + L E V M GD
Sbjct: 135 -----------DALVSADLYGLVGVGKPDPKIF--------ELALEELGVKPEEVLMVGD 175
Query: 729 GVNDAPALKLAD 740
GVND PA K A
Sbjct: 176 GVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 69.1 bits (169), Expect = 4e-12
Identities = 76/323 (23%), Positives = 126/323 (39%), Gaps = 40/323 (12%)
Query: 68 ILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE---KA-L 123
I+ V + ++ + +S G G + +I IL + + + E+ AE KA
Sbjct: 37 IVWVGSLLTTCITIAPAS-FGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQA 95
Query: 124 EALKKIQCES-GKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVE 182
++LK + + K+LRD + +PA L GDIV + GD +P D V S V+
Sbjct: 96 DSLKGTKKTTFAKLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIEGVAS---VD 152
Query: 183 QSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQ 242
+S++TGE+ P++K + F V GT +++ V T + ++
Sbjct: 153 ESAITGESAPVIKESGGDFAS----------VTGGTRILSDWLVVECTANPGETFLDRMI 202
Query: 243 KQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQF 302
+ A + TP L LT LV +W G +V
Sbjct: 203 ALVEGA--QRRKTPNEIALTILLIALTLVFLLVTATLWPFAAYG--------GNAISV-- 250
Query: 303 SFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTV 362
+ VAL V IP + +++ G ++ N I +VE G
Sbjct: 251 ---------TVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDT 301
Query: 363 ICSDKTGTLTTNQMSVTEFFTLG 385
+ DKTGT+T +EF
Sbjct: 302 LLLDKTGTITLGNRLASEFIPAQ 324
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 1e-11
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 44/144 (30%)
Query: 613 DLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLT 672
+ +G++ L+D R +AI + + GI+ +++TGDN A AI ++
Sbjct: 556 NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGEL---------- 605
Query: 673 GRSFTGKEFMA--LSS--TQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGD 728
G +F A L + + L++H +AM GD
Sbjct: 606 -----GIDFRAGLLPEDKVKAVTELNQH------------------------APLAMVGD 636
Query: 729 GVNDAPALKLADIGVAMGITGTEV 752
G+NDAPA+K A IG+AMG +GT+V
Sbjct: 637 GINDAPAMKAASIGIAMG-SGTDV 659
|
Length = 741 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 67.1 bits (164), Expect = 2e-11
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 33/130 (25%)
Query: 617 VGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSF 676
++ +RDP R A+ AG ++++TGDN +TA AI ++ +G +
Sbjct: 642 AALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKE----AGID------- 690
Query: 677 TGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPAL 736
+V + P K E ++ L+ G VAM GDG+NDAPAL
Sbjct: 691 ----------------------EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPAL 728
Query: 737 KLADIGVAMG 746
AD+G+AMG
Sbjct: 729 AQADVGIAMG 738
|
Length = 834 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 61.6 bits (149), Expect = 9e-10
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 33/131 (25%)
Query: 615 VFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGR 674
+GV+ L+D + G+ + + R GIE ++ TGDN+ TA I ++ +
Sbjct: 431 EILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV---------- 480
Query: 675 SFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAP 734
+ + +P K ++R + G +VAMTGDG NDAP
Sbjct: 481 -----------------------DRFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAP 517
Query: 735 ALKLADIGVAM 745
AL A++G+AM
Sbjct: 518 ALAEANVGLAM 528
|
Length = 673 |
| >gnl|CDD|184448 PRK14010, PRK14010, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 60.9 bits (147), Expect = 2e-09
Identities = 69/289 (23%), Positives = 131/289 (45%), Gaps = 45/289 (15%)
Query: 101 IVLILVLNAIVGVWQESNAE----KALEALKKIQCE--SGKVLRDG-YLVPDLPAIGLVP 153
I +IL+L + + E+ AE AL++ Q E + ++ +DG Y + D A L
Sbjct: 68 IFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKARRIKQDGSYEMID--ASDLKK 125
Query: 154 GDIVELGVGDKVPADMRVA-ALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKEN 212
G IV + G+++P D +V L T V++S++TGE+ P++K + F +
Sbjct: 126 GHIVRVATGEQIPNDGKVIKGLAT----VDESAITGESAPVIKESGGDF----------D 171
Query: 213 MVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAI 272
V GT+V + + + ++ + K+ + A+ ++ TP ++ F +T I
Sbjct: 172 NVIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKK--TP--NEIALFTLLMTLTI 227
Query: 273 GLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITT 332
+ +++ + FL++++ + +ALAV IP + +++
Sbjct: 228 IFLVVILTMYPLAKFLNFNLS-----------------IAMLIALAVCLIPTTIGGLLSA 270
Query: 333 CLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEF 381
G ++ Q N + + SVET G V+ DKTGT+T F
Sbjct: 271 IGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAF 319
|
Length = 673 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 2e-06
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 699 KVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743
+VF+ A+P K +I+R LK+ E V M G+G ND AL+ AD+G+
Sbjct: 72 RVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGI 116
|
Length = 152 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 3e-05
Identities = 78/329 (23%), Positives = 131/329 (39%), Gaps = 58/329 (17%)
Query: 71 VAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE---KAL-EAL 126
V + ++ L F G G + L I +IL + + E+ AE KA ++L
Sbjct: 40 VGSILTTFLTIFPDLFGGTGGSRLFN--LAITIILWFTVLFANFAEAVAEGRGKAQADSL 97
Query: 127 KKIQCES-GKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSS 185
+K + E+ ++LR + +PA L GDIV + G+ +P+D V S V++S+
Sbjct: 98 RKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIEGVAS---VDESA 154
Query: 186 LTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQI 245
+TGE+ P+++ E + V GT V++ + I N + + I
Sbjct: 155 ITGESAPVIR----------ESGGDFSSVTGGTRVLSDW---LKIRITANPGETFLDRMI 201
Query: 246 HDASLEESDTPLRKKL-DEFG-NRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFS 303
+L E R+K +E L + + L+ L+ V +P +
Sbjct: 202 ---ALVEGAE--RQKTPNEIALTILLSGLTLIFLLA------------VATLYPFAIYSG 244
Query: 304 FEKCTYYFKIAVALAVAAIPEGLPAVITTCLAL-------GTRKMAQKNAIVRKLPSVET 356
+ +A L V IP TT L G ++ Q N I +VE
Sbjct: 245 GGAASVTVLVA--LLVCLIP-------TTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEA 295
Query: 357 LGCTTVICSDKTGTLTTNQMSVTEFFTLG 385
G + DKTGT+T +EF +
Sbjct: 296 AGDVDTLLLDKTGTITLGNRQASEFIPVP 324
|
Length = 681 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 46.7 bits (112), Expect = 4e-05
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 68 ILLVAAFISFILAYF--HSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE---KA 122
++ V + ++ IL G +GF L I L L + + E+ AE KA
Sbjct: 38 VVEVGSILTTILTIAPLLFQSGGPAGFN-----LAITLWLWFTVLFANFAEALAEGRGKA 92
Query: 123 L-EALKKIQCES-GKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
++L+ + ++ + LR+ ++PA L GDIV + G+ +PAD V S
Sbjct: 93 QADSLRGAKKDTFARKLREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIEGVAS--- 149
Query: 181 VEQSSLTGEAMPILK 195
V++S++TGE+ P+++
Sbjct: 150 VDESAITGESAPVIR 164
|
Length = 679 |
| >gnl|CDD|119389 cd01427, HAD_like, Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.001
Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 15/122 (12%)
Query: 629 GVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDL----TGRSFTGKEFMAL 684
GV +A+ + + GI++ + T ++ + ++ L + + + KE + L
Sbjct: 28 GVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYPKEGLFL 87
Query: 685 SSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALK-LADIGV 743
+ + K +++L E V M GD +ND K +GV
Sbjct: 88 G-GGPFDIGKPNPDK---------LLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137
Query: 744 AM 745
A+
Sbjct: 138 AV 139
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. Length = 139 |
| >gnl|CDD|182635 PRK10671, copA, copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.002
Identities = 64/269 (23%), Positives = 103/269 (38%), Gaps = 42/269 (15%)
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
KALE L + + +V+ D +P + PG ++ L GD+VP D +
Sbjct: 312 KALEKLLDLTPPTARVVTDEG-EKSVPLADVQPGMLLRLTTGDRVPVD---GEITQGEAW 367
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
++++ LTGE +P KG + V AGT V +GS + G +T + +
Sbjct: 368 LDEAMLTGEPIPQQKGEG-------------DSVHAGTVVQDGSVLFRASAVGSHTTLSR 414
Query: 241 IQKQIHDASLEESDTP----LRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGW 296
I + + A +S P L K+ + I LV +W F
Sbjct: 415 IIRMVRQA---QSSKPEIGQLADKISAVFVPVVVVIALVSAAIWY-----FFG------- 459
Query: 297 PANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVET 356
PA + Y IA + + A P L + G + A+ +VR +++
Sbjct: 460 PA------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDADALQR 513
Query: 357 LGCTTVICSDKTGTLTTNQMSVTEFFTLG 385
+ DKTGTLT + V T
Sbjct: 514 ASTLDTLVFDKTGTLTEGKPQVVAVKTFN 542
|
Length = 834 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 753 | |||
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 100.0 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.88 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 99.57 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.52 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.45 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 99.26 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.0 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 98.97 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 98.95 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 98.95 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 98.94 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 98.93 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.93 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.87 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.85 | |
| PLN02887 | 580 | hydrolase family protein | 98.81 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.81 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 98.8 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.78 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.77 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.71 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.71 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.7 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.7 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.61 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.56 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.5 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.46 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.43 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.41 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.34 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.32 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.28 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.26 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 98.25 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.23 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.21 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 98.2 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.18 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.15 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 98.14 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 98.13 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.13 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 98.09 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 98.08 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.07 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.93 | |
| PLN02954 | 224 | phosphoserine phosphatase | 97.92 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 97.89 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 97.76 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.65 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.6 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.52 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 97.49 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 97.47 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.43 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.41 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.39 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.38 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.28 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 97.19 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 97.19 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.19 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.15 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 97.14 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 97.11 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 97.11 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.88 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.87 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.82 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 96.8 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.75 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.75 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 96.73 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 96.73 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.59 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.52 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 96.47 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 96.43 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 96.42 | |
| PLN02580 | 384 | trehalose-phosphatase | 96.36 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 96.32 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 96.31 | |
| PRK06769 | 173 | hypothetical protein; Validated | 96.29 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 96.28 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 96.27 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 96.27 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.24 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 96.2 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.17 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.12 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 96.06 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 95.99 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.98 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 95.81 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 95.78 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 95.75 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 95.66 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.62 | |
| PLN02940 | 382 | riboflavin kinase | 95.54 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 95.54 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 95.52 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 95.45 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 95.44 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 95.22 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.08 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 94.84 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 94.74 | |
| PLN02811 | 220 | hydrolase | 94.68 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 94.61 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 94.58 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 94.47 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 94.23 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 94.22 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 94.08 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 94.02 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 93.91 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 93.61 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 93.6 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 93.56 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 93.49 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 93.16 | |
| PLN03017 | 366 | trehalose-phosphatase | 93.03 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 92.95 | |
| KOG3040 | 262 | consensus Predicted sugar phosphatase (HAD superfa | 92.12 | |
| TIGR01993 | 184 | Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These | 91.99 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 91.84 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 91.77 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 91.73 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 91.41 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 91.34 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 91.01 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 90.47 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 90.41 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 90.3 | |
| PLN02423 | 245 | phosphomannomutase | 89.9 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 89.47 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 88.12 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 86.3 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 85.63 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 85.28 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 84.39 | |
| COG3700 | 237 | AphA Acid phosphatase (class B) [General function | 83.54 | |
| TIGR02251 | 162 | HIF-SF_euk Dullard-like phosphatase domain. This d | 82.32 | |
| PRK10748 | 238 | flavin mononucleotide phosphatase; Provisional | 82.06 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 81.98 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 80.76 |
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-129 Score=1037.81 Aligned_cols=700 Identities=52% Similarity=0.776 Sum_probs=627.4
Q ss_pred cccccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCC
Q 004437 6 FPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSS 85 (753)
Q Consensus 6 ~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 85 (753)
+++|..+++|.+..|+|++++|||.+|+.+|++.||+|+++.....++|+.+++||.++++.+|+++|++|+++.+
T Consensus 2 ~~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~~---- 77 (972)
T KOG0202|consen 2 EEAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLAD---- 77 (972)
T ss_pred cchhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHh----
Confidence 5679999999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred CCCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcc
Q 004437 86 DSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKV 165 (753)
Q Consensus 86 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~i 165 (753)
|.++++|.++++++.++++|||||++|++++|+++.++.++|+|+|+. +.+++.+|||||||.|+-||+|
T Consensus 78 ---------~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~-~~i~A~eLVPGDiV~l~vGDkV 147 (972)
T KOG0202|consen 78 ---------FDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKL-QHILARELVPGDIVELKVGDKI 147 (972)
T ss_pred ---------cccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcc-cceehhccCCCCEEEEecCCcc
Confidence 456888889999999999999999999999999999999999999987 6799999999999999999999
Q ss_pred cccEEEEEeeCCcEEEEcccccCCCCccccCCCCCc-CCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHH
Q 004437 166 PADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVF-LDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQ 244 (753)
Q Consensus 166 PaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~-~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~ 244 (753)
|||.|+++. -++.||||+|||||.|+.|...... .++.+..++.|++|+||.|..|.++|+|+.||.+|.+|++.+.
T Consensus 148 PADlRl~e~--~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~ 225 (972)
T KOG0202|consen 148 PADLRLIEA--KSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKM 225 (972)
T ss_pred ccceeEEee--eeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHH
Confidence 999999987 4599999999999999999887776 6778889999999999999999999999999999999999999
Q ss_pred HhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccC
Q 004437 245 IHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPE 324 (753)
Q Consensus 245 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~ 324 (753)
++.. +..+||||+++|.+...+..++.++++.+|++.+++|. +|.+..+++..+.++|.+++++.++++|+
T Consensus 226 m~~~--e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~-------~p~~~g~~fk~~~~~f~IaVsLAVAAIPE 296 (972)
T KOG0202|consen 226 MQAT--ESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFL-------DPVHGGSWFKGALYYFKIAVSLAVAAIPE 296 (972)
T ss_pred Hhcc--CCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhc-------cccccccchhchhhhhhHHHHHHHHhccC
Confidence 9765 77799999999999999998999999999988766655 23333444778889999999999999999
Q ss_pred ChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCC
Q 004437 325 GLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPK 404 (753)
Q Consensus 325 ~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 404 (753)
+||+.++++++++.+||+|++++||+++++|+||.+++||+|||||||+|+|++.+++..+........++..+.+|+|.
T Consensus 297 GLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty~~~ 376 (972)
T KOG0202|consen 297 GLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTYSPE 376 (972)
T ss_pred CCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCceeCCC
Confidence 99999999999999999999999999999999999999999999999999999999999987766667778888899988
Q ss_pred CCCcccCCCC----CccHHHHHHHHHHhhccCCeeecCC-CcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhh
Q 004437 405 DGGIVDWPCY----NMDANLQAMAKICAVCNDAGVYCDG-PLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAAN 479 (753)
Q Consensus 405 ~~~~~~~~~~----~~~~~~~~~~~~~~~c~~~~~~~~~-~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~ 479 (753)
.+...+.... ...+.++.++.++++||++.+.+++ +.|...|.|+|.||..+++++|++.....+...
T Consensus 377 g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~------- 449 (972)
T KOG0202|consen 377 GEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDADCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSN------- 449 (972)
T ss_pred CceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCchhhHHhcCCchHHHHHHHHHHcCCCcchhhcccc-------
Confidence 5554444222 2467789999999999999888766 778889999999999999999998755211110
Q ss_pred hcccccccccccccccccccceeeeecCCCCCceEEEEEecCCCe--EEEEEcCChHHHHHhcccccccCC-ceeeCCHH
Q 004437 480 YLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGH--NQLLVKGSVESLLERSSHVQLADG-SVVPLDEP 556 (753)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~--~~~~~KGa~e~il~~c~~~~~~~~-~~~~l~~~ 556 (753)
...-.|+.+....++...++||+|+||+|||.+.+..++ +.+|+|||+|.++++|+++...+| ...|+++.
T Consensus 450 ------~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~ 523 (972)
T KOG0202|consen 450 ------EEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQA 523 (972)
T ss_pred ------cccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHH
Confidence 001134444566777889999999999999999876664 799999999999999998888776 56999999
Q ss_pred HHHHHHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHH
Q 004437 557 CWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDD 636 (753)
Q Consensus 557 ~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~ 636 (753)
.|+.+.+...+|+++|+|||++|+++..++ .+......+...+..+|.||+|+|++|+.||+|++++++|+.
T Consensus 524 ~re~il~~~~~~g~~gLRvLalA~~~~~~~--------~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~ 595 (972)
T KOG0202|consen 524 SRETILANVYEMGSEGLRVLALASKDSPGQ--------VPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIEL 595 (972)
T ss_pred HHHHHHHHHHHHhhccceEEEEEccCCccc--------ChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHH
Confidence 999999999999999999999999975431 111222334556788899999999999999999999999999
Q ss_pred HHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHH
Q 004437 637 CRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRML 716 (753)
Q Consensus 637 l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l 716 (753)
|+++||+|+|+|||+..||.+||+++|+.....++.+.+++|.+|+.+++++......+ ..+|+|++|.+|.++|+.|
T Consensus 596 c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~--~~vFaR~~P~HK~kIVeaL 673 (972)
T KOG0202|consen 596 CRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRR--VLVFARAEPQHKLKIVEAL 673 (972)
T ss_pred HHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCCHHHHHHHhhc--ceEEEecCchhHHHHHHHH
Confidence 99999999999999999999999999999988888899999999999999999988888 7899999999999999999
Q ss_pred HHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 717 KEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 717 ~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
|++|+.|+|+|||.||+|+||.||||||||++|+||+
T Consensus 674 q~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVa 710 (972)
T KOG0202|consen 674 QSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVA 710 (972)
T ss_pred HhcCCEEEecCCCccchhhhhhcccceeecCCccHhh
Confidence 9999999999999999999999999999999999985
|
|
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-113 Score=912.64 Aligned_cols=657 Identities=33% Similarity=0.483 Sum_probs=562.9
Q ss_pred CHHHHHHHhCCCCCCCCCH--HHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCCCCC
Q 004437 12 TVEQCLKEYNVKLDKGLSS--REVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGD 89 (753)
Q Consensus 12 ~~~~~~~~l~~~~~~GL~~--~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (753)
.+++|+++|+||+..||+. +|+.+|++.||+|.++.+++++||+++|++|++...+++.++|++++.++++....
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~--- 178 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPGI--- 178 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCCC---
Confidence 5789999999999999987 89999999999999999999999999999999999999999999999999876531
Q ss_pred CCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhh-cccccEEEeCCeeeeeecCCCCCCCcEEEecCCCccccc
Q 004437 90 SGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKI-QCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPAD 168 (753)
Q Consensus 90 ~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~-~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD 168 (753)
...|+++++|++.+++..++....+|++.++++.|++. ...++.|+|||+.+ +|+..|||||||+.|+.||.+|||
T Consensus 179 --~~GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~-~isI~diVVGDIv~lk~GDqvPAD 255 (1034)
T KOG0204|consen 179 --EDGWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQ-QISIYDLVVGDIVQLKIGDQVPAD 255 (1034)
T ss_pred --CcccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEE-EEEEeeeeeccEEEeecCCccccc
Confidence 23689999998888888888899999999999988854 34578999999995 699999999999999999999999
Q ss_pred EEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhh
Q 004437 169 MRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDA 248 (753)
Q Consensus 169 ~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~ 248 (753)
|+++++ +++.+|||++||||.+++|... .+++|++||++.+|+++++|+.+|.+|..|+++..+...
T Consensus 256 Gvli~g--n~L~iDESSlTGESd~v~k~~~-----------~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~ 322 (1034)
T KOG0204|consen 256 GVLIQG--NSLKIDESSLTGESDHVQKSLD-----------KDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAG 322 (1034)
T ss_pred eEEEec--cceeEecccccCCCcceeccCC-----------CCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcC
Confidence 999985 7999999999999999999862 378999999999999999999999999999999988654
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc-ccccCCC--CcccccchhhHHHHHHHHHHHHHHhccCC
Q 004437 249 SLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLS-WDVVDGW--PANVQFSFEKCTYYFKIAVALAVAAIPEG 325 (753)
Q Consensus 249 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~l~~~i~llv~~iP~~ 325 (753)
...++|+|-++++++..+..+.+.++.+++++....|+. ....++- ........+.+..+|.+++.++++++|+|
T Consensus 323 --~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEG 400 (1034)
T KOG0204|consen 323 --GEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEG 400 (1034)
T ss_pred --CCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCC
Confidence 558999999999999999988888777766654433332 1111111 11111225667788889999999999999
Q ss_pred hhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCC
Q 004437 326 LPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKD 405 (753)
Q Consensus 326 L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~ 405 (753)
||+++++++++++++|.+.+.+||+++++|++|..++||+|||||||+|+|+|.+.|+.+..+... .|.
T Consensus 401 LPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~----------~~~- 469 (1034)
T KOG0204|consen 401 LPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVN----------SPK- 469 (1034)
T ss_pred ccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeecccccccc----------Ccc-
Confidence 999999999999999999999999999999999999999999999999999999999876533211 010
Q ss_pred CCcccCCCCCccHHHH-HHHHHHhhccCCeeecC-C--CcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhc
Q 004437 406 GGIVDWPCYNMDANLQ-AMAKICAVCNDAGVYCD-G--PLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYL 481 (753)
Q Consensus 406 ~~~~~~~~~~~~~~~~-~~~~~~~~c~~~~~~~~-~--~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 481 (753)
..+.++.+. .++...+...+..+..+ . ......|+|+|.||+.+..++|.++...
T Consensus 470 -------~~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~-------------- 528 (1034)
T KOG0204|consen 470 -------SSNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDV-------------- 528 (1034)
T ss_pred -------cccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhh--------------
Confidence 012333433 44445555444444332 2 2678899999999999999999876544
Q ss_pred ccccccccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHH
Q 004437 482 IDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLM 561 (753)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~ 561 (753)
+....+.+.+||+|.||+|+++++.+++..++|+|||+|.++.+|+++...+|+..+++++.+..+
T Consensus 529 --------------R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~~~ 594 (1034)
T KOG0204|consen 529 --------------RPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRKSF 594 (1034)
T ss_pred --------------cchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHHHH
Confidence 345567899999999999999999887663499999999999999999999999999999999999
Q ss_pred HHHHHHhhhccceEEEEEEeccccc---cccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHH
Q 004437 562 LSRHLEMSSKGLRCLGMAYKDELGE---FSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCR 638 (753)
Q Consensus 562 ~~~~~~~~~~G~rvl~~A~k~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~ 638 (753)
+..++.|+++|+|++++|||+.... ..+|. .....+.+|+++|++|++||+||++++||+.|+
T Consensus 595 ~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~--------------~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq 660 (1034)
T KOG0204|consen 595 KDVIEPMASEGLRTICLAYRDFVAGPDEEPSWD--------------NEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQ 660 (1034)
T ss_pred HHHHHHHHHhhhheeeEEeeccccCCCCCCCcc--------------ccccCCCCeEEEEEeeccCCCCCCcHHHHHHHH
Confidence 9999999999999999999983221 01111 123447899999999999999999999999999
Q ss_pred hCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHH
Q 004437 639 GAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKE 718 (753)
Q Consensus 639 ~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~ 718 (753)
+|||+|.|+||||..||++||.+|||..++.+ ..+++|.+|.++.++++.++..+ ..|+||.+|.||..+|+.+++
T Consensus 661 ~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d--~~~lEG~eFr~~s~ee~~~i~pk--l~VlARSSP~DK~lLVk~L~~ 736 (1034)
T KOG0204|consen 661 RAGITVRMVTGDNINTAKAIARECGILTPGGD--FLALEGKEFRELSQEERDKIWPK--LRVLARSSPNDKHLLVKGLIK 736 (1034)
T ss_pred HcCcEEEEEeCCcHHHHHHHHHHcccccCCCc--cceecchhhhhcCHHHHHhhhhh--heeeecCCCchHHHHHHHHHh
Confidence 99999999999999999999999999988765 57899999999999999999999 799999999999999999999
Q ss_pred cCCeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 719 MGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 719 ~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
+|++|+++|||+||+|||+.||||+||||.|+|||
T Consensus 737 ~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVA 771 (1034)
T KOG0204|consen 737 QGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVA 771 (1034)
T ss_pred cCcEEEEecCCCCCchhhhhcccchhccccchhhh
Confidence 99999999999999999999999999999999986
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-110 Score=992.62 Aligned_cols=695 Identities=30% Similarity=0.465 Sum_probs=558.7
Q ss_pred ccccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCC
Q 004437 7 PAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSD 86 (753)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (753)
+||.++++++++.|+|++.+|||++|+++|+++||+|+++.++++++|+.+++||.++++++++++++++++.+
T Consensus 6 ~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~~------ 79 (1053)
T TIGR01523 6 AYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAMH------ 79 (1053)
T ss_pred chhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHh------
Confidence 68999999999999999889999999999999999999999888999999999999999999999999999874
Q ss_pred CCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCccc
Q 004437 87 SGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVP 166 (753)
Q Consensus 87 ~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iP 166 (753)
.|.++++|+++++++.+++++||+|+++++++|+++.+.+++|+|||++ ++|++++|||||||.|++||+||
T Consensus 80 -------~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~-~~I~a~eLVpGDIv~L~~Gd~VP 151 (1053)
T TIGR01523 80 -------DWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKS-DAIDSHDLVPGDICLLKTGDTIP 151 (1053)
T ss_pred -------hHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCee-eecCHhhCCCCCEEEECCCCEee
Confidence 5788999999999999999999999999999999999999999999999 56999999999999999999999
Q ss_pred ccEEEEEeeCCcEEEEcccccCCCCccccCCCCCc--CCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHH
Q 004437 167 ADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVF--LDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQ 244 (753)
Q Consensus 167 aD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~--~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~ 244 (753)
|||+|+++ +++.||||+|||||.|+.|.+.... ..+....++.|++|+||.|.+|.+.++|++||.+|.+|++.+.
T Consensus 152 AD~rLi~~--~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~ 229 (1053)
T TIGR01523 152 ADLRLIET--KNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAG 229 (1053)
T ss_pred ccEEEEEe--CceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHH
Confidence 99999985 7899999999999999999874332 1234455678999999999999999999999999999999998
Q ss_pred Hhhhcc---C------------------------------CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 004437 245 IHDASL---E------------------------------ESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWD 291 (753)
Q Consensus 245 ~~~~~~---~------------------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (753)
+..... + ..+||+|+++++++.+++.++++++++++++... .
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~---~-- 304 (1053)
T TIGR01523 230 LQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF---D-- 304 (1053)
T ss_pred HhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh---h--
Confidence 854321 0 1249999999999999888887777776654221 0
Q ss_pred ccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCccc
Q 004437 292 VVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTL 371 (753)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTL 371 (753)
+ ....+.++++++++++|++||+.++++++++++||++++++||+++++|+||.+++||+||||||
T Consensus 305 ----~----------~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTL 370 (1053)
T TIGR01523 305 ----V----------DKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTI 370 (1053)
T ss_pred ----h----------hHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCcc
Confidence 0 12345568899999999999999999999999999999999999999999999999999999999
Q ss_pred ccCceEEEEEEEcCcc-cceeeeeeecCcccCCCCCC---------------------c--------ccCC-CCC-ccHH
Q 004437 372 TTNQMSVTEFFTLGRK-TTISRIFHVEGTTYDPKDGG---------------------I--------VDWP-CYN-MDAN 419 (753)
Q Consensus 372 T~~~~~v~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~---------------------~--------~~~~-~~~-~~~~ 419 (753)
|+|+|+|.+++..+.. +... ..+..|.|..+. . .... ... .+..
T Consensus 371 T~N~M~V~~i~~~~~~~~~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (1053)
T TIGR01523 371 TQGKMIARQIWIPRFGTISID----NSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDL 446 (1053)
T ss_pred ccceEEEEEEEEcCCceEEec----CCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHH
Confidence 9999999999875421 1000 000111111000 0 0000 000 1234
Q ss_pred HHHHHHHHhhccCCeeecC--CCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhccccccccccccccccc
Q 004437 420 LQAMAKICAVCNDAGVYCD--GPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTK 497 (753)
Q Consensus 420 ~~~~~~~~~~c~~~~~~~~--~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 497 (753)
+..++.++++||++.+..+ ++.+...|+|+|.||+.++.+.|+......+.. ........+.+............
T Consensus 447 ~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 523 (1053)
T TIGR01523 447 FIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEE---DLLKSNENDQSSLSQHNEKPGSA 523 (1053)
T ss_pred HHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchh---hhhhhcccccccccccccccccc
Confidence 6778899999999876543 233456799999999999998887431100000 00000000000000000001134
Q ss_pred ccceeeeecCCCCCceEEEEEecCCC-eEEEEEcCChHHHHHhcccccccCC-ceeeCCHHHHHHHHHHHHHhhhccceE
Q 004437 498 RSKRVATLEFDRIRKSMSVIVREPTG-HNQLLVKGSVESLLERSSHVQLADG-SVVPLDEPCWQLMLSRHLEMSSKGLRC 575 (753)
Q Consensus 498 ~~~~~~~~~F~s~~k~~sviv~~~~~-~~~~~~KGa~e~il~~c~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~G~rv 575 (753)
.+++++++||+|+||||+++++..++ ++++|+|||||.|+++|+.+...+| ...|++++.++.+.+.+++|+++|+||
T Consensus 524 ~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~~GlRv 603 (1053)
T TIGR01523 524 QFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAAEGLRV 603 (1053)
T ss_pred ccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHhcCCeE
Confidence 57899999999999999999987644 4789999999999999998765554 567899999999999999999999999
Q ss_pred EEEEEeccccc-cccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHH
Q 004437 576 LGMAYKDELGE-FSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKST 654 (753)
Q Consensus 576 l~~A~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~ 654 (753)
|++|||....+ +... .... ....+..+|+||+|+|+++|+||+|++++++|++|+++||+|+|+|||+..|
T Consensus 604 La~A~r~l~~~~~~~~--~~~~------~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~t 675 (1053)
T TIGR01523 604 LAFASKSFDKADNNDD--QLKN------ETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPET 675 (1053)
T ss_pred EEEEEEECCchhccch--hhhc------cccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHH
Confidence 99999975432 1100 0000 0012345689999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCC------ccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcC
Q 004437 655 AEAICRQIKLFSGNE------DLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGD 728 (753)
Q Consensus 655 a~~ia~~~gi~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GD 728 (753)
|.++|+++||..... .....+++|.++..+.++++.+.+.. ..||+|++|+||.++|+.+|+.|+.|+|+||
T Consensus 676 A~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l~~~~l~~~~~~--~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GD 753 (1053)
T TIGR01523 676 AKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDALSDEEVDDLKAL--CLVIARCAPQTKVKMIEALHRRKAFCAMTGD 753 (1053)
T ss_pred HHHHHHHcCCCCccccccccccccceeeehHHhhhcCHHHHHHHhhc--CeEEEecCHHHHHHHHHHHHhcCCeeEEeCC
Confidence 999999999975421 11246899999999999888887776 6899999999999999999999999999999
Q ss_pred CcccHHHhhhcCceEecCCCCccCC
Q 004437 729 GVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 729 g~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
|.||+|||++||||||||++|+|++
T Consensus 754 GvNDapaLk~AdVGIAmg~~gt~va 778 (1053)
T TIGR01523 754 GVNDSPSLKMANVGIAMGINGSDVA 778 (1053)
T ss_pred CcchHHHHHhCCccEecCCCccHHH
Confidence 9999999999999999998998863
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-110 Score=977.38 Aligned_cols=648 Identities=43% Similarity=0.617 Sum_probs=563.8
Q ss_pred cccccCCHH--HHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcc
Q 004437 6 FPAWSWTVE--QCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFH 83 (753)
Q Consensus 6 ~~~~~~~~~--~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~ 83 (753)
..||..+.+ ++...+.++...||+.+|+.+|++.||+|+++..+..++|+.++.+|.++++++++++++++++++.+.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~ 100 (917)
T COG0474 21 ETWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWV 100 (917)
T ss_pred ccccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 478999999 999999999999999999999999999999998888999999999999999999999999999887543
Q ss_pred CCCCCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCC
Q 004437 84 SSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGD 163 (753)
Q Consensus 84 ~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~ 163 (753)
+. . .+.+.++.+++++.+++++||+|+++.+++++++.+.+++|+|||++ ++|++++|||||||.|++||
T Consensus 101 ~~------~---~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~-~~i~a~eLVpGDiV~l~~gd 170 (917)
T COG0474 101 DA------G---VDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKF-VEIPASELVPGDIVLLEAGD 170 (917)
T ss_pred cc------C---cceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcE-EEecHHHCCCCcEEEECCCC
Confidence 21 0 34556778888899999999999999999999999999999999999 46999999999999999999
Q ss_pred cccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCccccc-ccccEEEeecEEEeeeEEEEEEEEccchhHHHHH
Q 004437 164 KVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQ-AKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQ 242 (753)
Q Consensus 164 ~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~-~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~ 242 (753)
+||||++|+++ .+++||||+|||||.|+.|.+.+....+.... ++.|++|+||.+++|.++++|++||.+|.+|++.
T Consensus 171 ~vPAD~rLl~~--~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia 248 (917)
T COG0474 171 VVPADLRLLES--SDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIA 248 (917)
T ss_pred ccccceEEEEe--cCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHH
Confidence 99999999985 44799999999999999999876655555555 7899999999999999999999999999999999
Q ss_pred HHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhc
Q 004437 243 KQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAI 322 (753)
Q Consensus 243 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~i 322 (753)
+.+... ....+|+++.++++..+++.+++++++++++..+... ..+ +...+..+++++++++
T Consensus 249 ~~~~~~--~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~-----~~~-----------~~~~~~~~v~l~va~I 310 (917)
T COG0474 249 RLLPTK--KEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRG-----GNG-----------LLESFLTALALAVAAV 310 (917)
T ss_pred Hhhccc--cccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----Ccc-----------HHHHHHHHHHHHHhcc
Confidence 998754 3678999999999999999999888888887753110 011 2457888999999999
Q ss_pred cCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccC
Q 004437 323 PEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYD 402 (753)
Q Consensus 323 P~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 402 (753)
|++||+.++++++.++.+|+++++++|+++++|+||++++||+|||||||+|+|+|.+++..+.. ...+
T Consensus 311 PegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~-----------~~~~ 379 (917)
T COG0474 311 PEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGG-----------KDID 379 (917)
T ss_pred ccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCc-----------cccc
Confidence 99999999999999999999999999999999999999999999999999999999999987410 0000
Q ss_pred CCCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcc
Q 004437 403 PKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLI 482 (753)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 482 (753)
+ ......+....++..+++||++..... + ++..|||+|.||++++++.|+.. ... .
T Consensus 380 ~--------~~~~~~~~~~~~l~~~~lc~~~~~~~~-~-~~~~gdptE~Al~~~a~~~~~~~-~~~------~------- 435 (917)
T COG0474 380 D--------KDLKDSPALLRFLLAAALCNSVTPEKN-G-WYQAGDPTEGALVEFAEKLGFSL-DLS------G------- 435 (917)
T ss_pred c--------cccccchHHHHHHHHHHhcCccccccc-C-ceecCCccHHHHHHHHHhcCCcC-CHH------H-------
Confidence 0 001112345578889999999887766 4 78899999999999999988743 100 0
Q ss_pred cccccccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHH
Q 004437 483 DSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLML 562 (753)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~ 562 (753)
....+++++++||+|.|||||++++..++++++++|||||.|+++|+.. +...+++++.++.++
T Consensus 436 ------------~~~~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~----~~~~~~~~~~~~~~~ 499 (917)
T COG0474 436 ------------LEVEYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI----GELEPLTEEGLRTLE 499 (917)
T ss_pred ------------HhhhcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhccc----CcccccCHHHHHHHH
Confidence 1445688999999999999999999777779999999999999999986 667789999999999
Q ss_pred HHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCC
Q 004437 563 SRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGI 642 (753)
Q Consensus 563 ~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi 642 (753)
...++|+++||||+++|||..+..... ... ...|+||+|+|+++|+||+|+++++||+.|+++||
T Consensus 500 ~~~~~la~~glRvla~A~k~~~~~~~~--------------~~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI 564 (917)
T COG0474 500 EAVKELASEGLRVLAVAYKKLDRAEKD--------------DEV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGI 564 (917)
T ss_pred HHHHHHHHHHHHHHHHHhccCCccccc--------------chh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCC
Confidence 999999999999999999953321100 001 46789999999999999999999999999999999
Q ss_pred eEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCe
Q 004437 643 EVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEV 722 (753)
Q Consensus 643 ~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~ 722 (753)
+|||+|||+..||.+||++||+...... ..+++|.++..+.++++.+.+.++ .||||++|+||.++|+.+|+.|+.
T Consensus 565 ~v~MiTGD~~~TA~aIa~~~Gi~~~~~~--~~vi~G~el~~l~~~el~~~~~~~--~VfARvsP~qK~~IV~~lq~~g~v 640 (917)
T COG0474 565 KVWMITGDHVETAIAIAKECGIEAEAES--ALVIDGAELDALSDEELAELVEEL--SVFARVSPEQKARIVEALQKSGHV 640 (917)
T ss_pred cEEEECCCCHHHHHHHHHHcCCCCCCCc--eeEeehHHhhhcCHHHHHHHhhhC--cEEEEcCHHHHHHHHHHHHhCCCE
Confidence 9999999999999999999998764432 458999999999999999999995 499999999999999999999999
Q ss_pred EEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 723 VAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 723 v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
|+|+|||.||+||||+||||||||.+|+|++
T Consensus 641 VamtGDGvNDapALk~ADVGIamg~~Gtdaa 671 (917)
T COG0474 641 VAMTGDGVNDAPALKAADVGIAMGGEGTDAA 671 (917)
T ss_pred EEEeCCCchhHHHHHhcCccEEecccHHHHH
Confidence 9999999999999999999999998898864
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-106 Score=959.55 Aligned_cols=675 Identities=30% Similarity=0.456 Sum_probs=557.1
Q ss_pred CCcccccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhcc
Q 004437 4 KPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFH 83 (753)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~ 83 (753)
....||.++++++++.|+|++.+|||++|+++|+++||+|+++.++++++|+.++++|.++++++++++++++++...+.
T Consensus 13 ~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~ 92 (997)
T TIGR01106 13 VEMDDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQ 92 (997)
T ss_pred ccCCchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 34589999999999999999999999999999999999999998888999999999999999999999999988765443
Q ss_pred CCCCCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCC
Q 004437 84 SSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGD 163 (753)
Q Consensus 84 ~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~ 163 (753)
...+.......|+++++++++++++.++++++++|+++.+++++++.+.+++|+|||++ ++|++++|||||+|.|++||
T Consensus 93 ~~~~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~-~~I~~~~lv~GDiv~l~~Gd 171 (997)
T TIGR01106 93 ASTEEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEK-MSINAEQVVVGDLVEVKGGD 171 (997)
T ss_pred hccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEE-EEeeHHHCCCCCEEEECCCC
Confidence 21111112236888999999999999999999999999999999998999999999999 56999999999999999999
Q ss_pred cccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHH
Q 004437 164 KVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQK 243 (753)
Q Consensus 164 ~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~ 243 (753)
+|||||+++++ +.+.||||+|||||.|+.|.+... .....+..|++|+||.+++|++.++|++||.+|.+|++.+
T Consensus 172 ~IPaD~~il~~--~~l~VdeS~LTGES~pv~K~~~~~---~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~ 246 (997)
T TIGR01106 172 RIPADLRIISA--QGCKVDNSSLTGESEPQTRSPEFT---HENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIAS 246 (997)
T ss_pred EEeeeEEEEEc--cCcEEEccccCCCCCceeccCCCc---ccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHh
Confidence 99999999984 569999999999999999976421 1223466899999999999999999999999999999999
Q ss_pred HHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhcc
Q 004437 244 QIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIP 323 (753)
Q Consensus 244 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP 323 (753)
.+..+ +.+++|+++.++++..+++.++++++++++++.+.. . .. +...+.+++++++++||
T Consensus 247 ~~~~~--~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~-----------~~~~~~~~i~v~v~~iP 307 (997)
T TIGR01106 247 LASGL--ENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL--G----YT-----------WLEAVIFLIGIIVANVP 307 (997)
T ss_pred hhhhc--ccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--c----CC-----------HHHHHHHHHHHHhhcCC
Confidence 88654 556899999999999999888877777666553211 0 01 13456678889999999
Q ss_pred CChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCC
Q 004437 324 EGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDP 403 (753)
Q Consensus 324 ~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~ 403 (753)
|+||++++++++.++++|+++|+++|+++++|+||++++||||||||||+|+|+|.+++..+..+... . .+++
T Consensus 308 ~~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~------~-~~~~ 380 (997)
T TIGR01106 308 EGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEAD------T-TEDQ 380 (997)
T ss_pred ccchHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecC------C-ccCC
Confidence 99999999999999999999999999999999999999999999999999999999999765432110 0 0111
Q ss_pred CCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCC-----cceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhh
Q 004437 404 KDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGP-----LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAA 478 (753)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~-----~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~ 478 (753)
. +... .......+.++.++++||++.+..+.. .....|+|+|.||++++.+.+.....
T Consensus 381 ~-~~~~----~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~------------ 443 (997)
T TIGR01106 381 S-GVSF----DKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVME------------ 443 (997)
T ss_pred C-CccC----CcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCHHH------------
Confidence 0 0000 011234557888999999876543321 13457899999999998754322110
Q ss_pred hhcccccccccccccccccccceeeeecCCCCCceEEEEEecC---CCeEEEEEcCChHHHHHhcccccccCCceeeCCH
Q 004437 479 NYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREP---TGHNQLLVKGSVESLLERSSHVQLADGSVVPLDE 555 (753)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~---~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~ 555 (753)
.+..+++++.+||+|+||||++++... ++.+++|+|||||.|+++|+.+. .+|...++++
T Consensus 444 ----------------~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~ 506 (997)
T TIGR01106 444 ----------------MRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDE 506 (997)
T ss_pred ----------------HHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHh-cCCCcccCCH
Confidence 045677889999999999999988643 24678999999999999999876 5788889999
Q ss_pred HHHHHHHHHHHHhhhccceEEEEEEeccccc-cccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHH
Q 004437 556 PCWQLMLSRHLEMSSKGLRCLGMAYKDELGE-FSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAI 634 (753)
Q Consensus 556 ~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i 634 (753)
+.++.+.+.+++|+++|+||+++|||....+ +.... .. +.......|+||+|+|+++++||+|++++++|
T Consensus 507 ~~~~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~-~~--------~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI 577 (997)
T TIGR01106 507 ELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGF-QF--------DTDDVNFPTDNLCFVGLISMIDPPRAAVPDAV 577 (997)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEEEeecCcccccccc-cc--------cchhhhccccCcEEEEEEeccCCChHHHHHHH
Confidence 9999999999999999999999999975432 11100 00 00111234889999999999999999999999
Q ss_pred HHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCc--------------------cccccccchhhhccCHHHHHHHHH
Q 004437 635 DDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNED--------------------LTGRSFTGKEFMALSSTQQIEALS 694 (753)
Q Consensus 635 ~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~ 694 (753)
++|+++||+|+|+|||+..+|.++|+++|+..+... -...+++|.++..+.++++.+.+.
T Consensus 578 ~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~ 657 (997)
T TIGR01106 578 GKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILK 657 (997)
T ss_pred HHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHH
Confidence 999999999999999999999999999999754321 012589999999999999999888
Q ss_pred hcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 695 KHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 695 ~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
++...||||++|+||.++|+.+|+.|+.|+|+|||.||+|||++||||||||++|+|++
T Consensus 658 ~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~va 716 (997)
T TIGR01106 658 YHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVS 716 (997)
T ss_pred hcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHH
Confidence 86667999999999999999999999999999999999999999999999998898863
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-104 Score=929.62 Aligned_cols=616 Identities=29% Similarity=0.468 Sum_probs=529.8
Q ss_pred ccccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCC
Q 004437 7 PAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSD 86 (753)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (753)
..+..+++++++.|+++. +|||++|+++|+++||+|+++.++++++|+.++++|++|++++++++++++++.+
T Consensus 48 ~~~~~~~~~v~~~l~~~~-~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~~------ 120 (902)
T PRK10517 48 KAAVMPEEELWKTFDTHP-EGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYATE------ 120 (902)
T ss_pred HHHcCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc------
Confidence 346789999999999986 6999999999999999999999888999999999999999999999999988764
Q ss_pred CCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeC------CeeeeeecCCCCCCCcEEEec
Q 004437 87 SGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRD------GYLVPDLPAIGLVPGDIVELG 160 (753)
Q Consensus 87 ~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~------g~~~~~i~~~~Lv~GDII~l~ 160 (753)
.|.++++++++++++.++++++|+|+++.+++|+++.+.+++|+|| |++ ++|++++|||||||.|+
T Consensus 121 -------~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~-~~I~~~eLvpGDiV~l~ 192 (902)
T PRK10517 121 -------DLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGW-LEIPIDQLVPGDIIKLA 192 (902)
T ss_pred -------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeE-EEEEHHhCCCCCEEEEC
Confidence 5778899999999999999999999999999999999999999999 567 57999999999999999
Q ss_pred CCCcccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHH
Q 004437 161 VGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240 (753)
Q Consensus 161 ~G~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~ 240 (753)
+||.|||||+|+++ .++.||||+|||||.|+.|.+......+....+.+|++|+||.|.+|.+.++|++||.+|.+|+
T Consensus 193 ~Gd~IPaDg~li~g--~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~Gk 270 (902)
T PRK10517 193 AGDMIPADLRILQA--RDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQ 270 (902)
T ss_pred CCCEEeeeEEEEEc--CceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHH
Confidence 99999999999983 5689999999999999999876443334455677899999999999999999999999999999
Q ss_pred HHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHH
Q 004437 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVA 320 (753)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~ 320 (753)
+.+.++++ ...++|+++.+++++.+++.++++++.+++++.... ..+ +...+.++++++++
T Consensus 271 I~~~v~~~--~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~------~~~-----------~~~~l~~alsv~V~ 331 (902)
T PRK10517 271 LAGRVSEQ--DSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYT------KGD-----------WWEAALFALSVAVG 331 (902)
T ss_pred HHHHhhcc--CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHh------cCC-----------HHHHHHHHHHHHHH
Confidence 99998765 567899999999999998888877777665553211 011 23467788999999
Q ss_pred hccCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcc
Q 004437 321 AIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTT 400 (753)
Q Consensus 321 ~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~ 400 (753)
+|||+||++++++++.++.+|+|+|++||+++++|+||++|+||||||||||+|+|+|.++.....
T Consensus 332 ~~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~~-------------- 397 (902)
T PRK10517 332 LTPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDISG-------------- 397 (902)
T ss_pred HcccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCCC--------------
Confidence 999999999999999999999999999999999999999999999999999999999987632100
Q ss_pred cCCCCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhh
Q 004437 401 YDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480 (753)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~ 480 (753)
. ..++++..+++|.... ...+||+|.|++.+++..+...
T Consensus 398 ~-----------------~~~~ll~~a~l~~~~~--------~~~~~p~d~All~~a~~~~~~~---------------- 436 (902)
T PRK10517 398 K-----------------TSERVLHSAWLNSHYQ--------TGLKNLLDTAVLEGVDEESARS---------------- 436 (902)
T ss_pred C-----------------CHHHHHHHHHhcCCcC--------CCCCCHHHHHHHHHHHhcchhh----------------
Confidence 0 0133444455543211 1257999999999876422000
Q ss_pred cccccccccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHH
Q 004437 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQL 560 (753)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~ 560 (753)
....+..+.++||++.+|+|+++++..++.+.+++||+||.++++|+.+. .++...|++++.++.
T Consensus 437 --------------~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~ 501 (902)
T PRK10517 437 --------------LASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVR-HNGEIVPLDDIMLRR 501 (902)
T ss_pred --------------hhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhh-cCCCeecCCHHHHHH
Confidence 02356678899999999999999987777788999999999999999875 456678999998999
Q ss_pred HHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhC
Q 004437 561 MLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGA 640 (753)
Q Consensus 561 ~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~ 640 (753)
+.+..++++++|+||+++|||+...+...+ ....|+|++|+|+++|+||+|++++++|++|+++
T Consensus 502 i~~~~~~~a~~G~rvlavA~k~~~~~~~~~----------------~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~a 565 (902)
T PRK10517 502 IKRVTDTLNRQGLRVVAVATKYLPAREGDY----------------QRADESDLILEGYIAFLDPPKETTAPALKALKAS 565 (902)
T ss_pred HHHHHHHHHhcCCEEEEEEEecCCcccccc----------------ccccccCceeeehHhhhCcchhhHHHHHHHHHHC
Confidence 999999999999999999999743211000 0113689999999999999999999999999999
Q ss_pred CCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcC
Q 004437 641 GIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720 (753)
Q Consensus 641 gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~ 720 (753)
||+|+|+|||+..+|.++|+++||.. ..+++|.+++.+.++++.+.+.+ ..+|+|++|+||.++|+.+|++|
T Consensus 566 GI~v~miTGD~~~tA~~IA~~lGI~~------~~v~~G~el~~l~~~el~~~~~~--~~VfAr~sPe~K~~IV~~Lq~~G 637 (902)
T PRK10517 566 GVTVKILTGDSELVAAKVCHEVGLDA------GEVLIGSDIETLSDDELANLAER--TTLFARLTPMHKERIVTLLKREG 637 (902)
T ss_pred CCEEEEEcCCCHHHHHHHHHHcCCCc------cCceeHHHHHhCCHHHHHHHHhh--CcEEEEcCHHHHHHHHHHHHHCC
Confidence 99999999999999999999999952 35889999999999999998888 67999999999999999999999
Q ss_pred CeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 721 ~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
+.|+|+|||.||+|||++|||||||| +|+|++
T Consensus 638 ~vVam~GDGvNDaPALk~ADVGIAmg-~gtdvA 669 (902)
T PRK10517 638 HVVGFMGDGINDAPALRAADIGISVD-GAVDIA 669 (902)
T ss_pred CEEEEECCCcchHHHHHhCCEEEEeC-CcCHHH
Confidence 99999999999999999999999999 999874
|
|
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-104 Score=936.17 Aligned_cols=654 Identities=32% Similarity=0.458 Sum_probs=539.2
Q ss_pred CHHHHHHHhCCCCCCCCC--HHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCCCCC
Q 004437 12 TVEQCLKEYNVKLDKGLS--SREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGD 89 (753)
Q Consensus 12 ~~~~~~~~l~~~~~~GL~--~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (753)
+++++++.|+|+.++||| ++|+++|+++||+|+++.++++++|++++++|+++++++++++++++++++++.+.....
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 788999999999999999 999999999999999999988999999999999999999999999999987553211122
Q ss_pred CCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhh-cccccEEEeCCeeeeeecCCCCCCCcEEEecCCCccccc
Q 004437 90 SGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKI-QCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPAD 168 (753)
Q Consensus 90 ~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~-~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD 168 (753)
.+...|+++++++++++++.+++.++++++++.++++++. .+.+++|+|||++ ++|++++|||||||.|++||+||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~-~~I~~~~Lv~GDiV~l~~Gd~IPaD 201 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQE-QQISIHDIVVGDIVSLSTGDVVPAD 201 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEE-EEEeHHHCCCCCEEEECCCCEeccc
Confidence 3345789999999999999999999999999999999864 4678999999999 5699999999999999999999999
Q ss_pred EEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhh
Q 004437 169 MRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDA 248 (753)
Q Consensus 169 ~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~ 248 (753)
|+|+++ +.+.||||+|||||.|+.|.+. ..|++|+||.+.+|.+.++|++||.+|.+|++.+.+..+
T Consensus 202 ~~li~g--~~l~VdES~LTGES~pv~K~~~-----------~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~ 268 (941)
T TIGR01517 202 GVFISG--LSLEIDESSITGESDPIKKGAP-----------KDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAE 268 (941)
T ss_pred EEEEEc--CcEEEEecccCCCCCcccccCC-----------CCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccC
Confidence 999983 4899999999999999999862 257999999999999999999999999999999988654
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhH
Q 004437 249 SLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPA 328 (753)
Q Consensus 249 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~ 328 (753)
..++|+++.++++..++..++++++++++++.+..+.......+... .......+...+..++++++++|||+||+
T Consensus 269 ---~~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~al~llv~~iP~~Lp~ 344 (941)
T TIGR01517 269 ---GEDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRD-TEEDAQTFLDHFIIAVTIVVVAVPEGLPL 344 (941)
T ss_pred ---CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc-cchhhHHHHHHHHHHHHHHHhhCCCchHH
Confidence 35679999999999999888777766655543211110000000000 00011234567888999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCc
Q 004437 329 VITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGI 408 (753)
Q Consensus 329 ~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (753)
+++++++.++.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+... . .
T Consensus 345 ~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~------~--~------- 409 (941)
T TIGR01517 345 AVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVR------D--V------- 409 (941)
T ss_pred HHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecC------c--c-------
Confidence 999999999999999999999999999999999999999999999999999988654221100 0 0
Q ss_pred ccCCCCCccHHHHHHHHHHhhccCCeeec-C-CCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccc
Q 004437 409 VDWPCYNMDANLQAMAKICAVCNDAGVYC-D-GPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSST 486 (753)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~-~-~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (753)
. ...+.....++..++.||+..... + ....+..|+|+|.|+++++.+.|......
T Consensus 410 ~----~~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~~~------------------- 466 (941)
T TIGR01517 410 L----RNVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQEV------------------- 466 (941)
T ss_pred c----ccCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHHHH-------------------
Confidence 0 001122344555555565543321 1 12235678999999999998766432110
Q ss_pred cccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHH
Q 004437 487 VRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHL 566 (753)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~ 566 (753)
+..+++++.+||+|++|+|+++++..++++++++|||||.++++|+.+...+|...|+++ .++.+.+.++
T Consensus 467 ---------~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~i~~~~~ 536 (941)
T TIGR01517 467 ---------RAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDRCADVIE 536 (941)
T ss_pred ---------HhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHHHHHHHH
Confidence 234567788999999999999999777778999999999999999987666777788887 7888999999
Q ss_pred HhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEE
Q 004437 567 EMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMV 646 (753)
Q Consensus 567 ~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i 646 (753)
+|+++|+||+++|||....+. +. .....|+||+|+|+++|+||+|++++++|++|+++||+++|
T Consensus 537 ~~a~~G~Rvl~~A~~~~~~~~--~~--------------~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~m 600 (941)
T TIGR01517 537 PLASDALRTICLAYRDFAPEE--FP--------------RKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRM 600 (941)
T ss_pred HHHhcCCEEEEEEEEecCccc--cc--------------cccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEE
Confidence 999999999999999743210 00 01123789999999999999999999999999999999999
Q ss_pred EcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEE
Q 004437 647 ITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMT 726 (753)
Q Consensus 647 ~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~ 726 (753)
+|||+..||.++|+++||.... ..+++|+++..+.++++.+.+.+ ..||+|++|+||.++|+.+|+.|+.|+|+
T Consensus 601 iTGD~~~tA~~iA~~~GI~~~~----~~vi~G~~~~~l~~~el~~~i~~--~~Vfar~sPe~K~~iV~~lq~~g~vVam~ 674 (941)
T TIGR01517 601 VTGDNIDTAKAIARNCGILTFG----GLAMEGKEFRRLVYEEMDPILPK--LRVLARSSPLDKQLLVLMLKDMGEVVAVT 674 (941)
T ss_pred ECCCChHHHHHHHHHcCCCCCC----ceEeeHHHhhhCCHHHHHHHhcc--CeEEEECCHHHHHHHHHHHHHCCCEEEEE
Confidence 9999999999999999997644 25899999999999999888887 68999999999999999999999999999
Q ss_pred cCCcccHHHhhhcCceEecCCCCccCC
Q 004437 727 GDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 727 GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
|||.||+|||++||||||||++|+|++
T Consensus 675 GDGvNDapALk~AdVGIAmg~~gtdvA 701 (941)
T TIGR01517 675 GDGTNDAPALKLADVGFSMGISGTEVA 701 (941)
T ss_pred CCCCchHHHHHhCCcceecCCCccHHH
Confidence 999999999999999999999999864
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-103 Score=927.42 Aligned_cols=640 Identities=39% Similarity=0.604 Sum_probs=544.5
Q ss_pred ccccCCHHHHHHHhCCCCCCCCC-HHHHHHHHHhcCCCccCCCCCccHHHHHHHHh-hhhHHHHHHHHHHHHHHHhhccC
Q 004437 7 PAWSWTVEQCLKEYNVKLDKGLS-SREVEKRRERYGWNELDKEKGKPLWQLVLEQF-DDTLVKILLVAAFISFILAYFHS 84 (753)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~GL~-~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f-~~~~~~~~~~~~~~~~~~~~~~~ 84 (753)
+||.++++++++.|+|++.+||| ++|+++|+++||+|+++.++++++|+.++++| ++|++++++++++++++++
T Consensus 3 ~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~g---- 78 (884)
T TIGR01522 3 QYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFMG---- 78 (884)
T ss_pred chhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHHc----
Confidence 68999999999999999999999 89999999999999999988899999999999 9999999999999998775
Q ss_pred CCCCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCc
Q 004437 85 SDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDK 164 (753)
Q Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~ 164 (753)
.|.++++++++++++.++++++|+|+++.+++|+++.+.+++|+|||++ ++|++++|||||||.|++||.
T Consensus 79 ---------~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~-~~I~~~eLv~GDiv~l~~Gd~ 148 (884)
T TIGR01522 79 ---------NIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKL-EHVLASTLVPGDLVCLSVGDR 148 (884)
T ss_pred ---------chhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEE-EEEEHHHCccCCEEEecCCCE
Confidence 4777888888888889999999999999999999999999999999999 579999999999999999999
Q ss_pred ccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCC-cccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHH
Q 004437 165 VPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLD-DCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQK 243 (753)
Q Consensus 165 iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~-~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~ 243 (753)
|||||+|+++ .++.||||+|||||.|+.|.+.+.... +....+++|++|+||.+.+|.+.++|++||.+|.+|++.+
T Consensus 149 IPaDg~ii~g--~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~ 226 (884)
T TIGR01522 149 VPADLRIVEA--VDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFK 226 (884)
T ss_pred EeeeEEEEEc--CceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHH
Confidence 9999999983 469999999999999999987532211 2334567899999999999999999999999999999999
Q ss_pred HHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhcc
Q 004437 244 QIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIP 323 (753)
Q Consensus 244 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP 323 (753)
.++++ ...++|+++.+++++.++.+++++++++++++.+ +. ..+ +...+.+++++++++||
T Consensus 227 ~v~~~--~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~--~~----~~~-----------~~~~~~~~v~llv~aiP 287 (884)
T TIGR01522 227 MMQAI--EKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGW--FQ----GKD-----------WLEMFTISVSLAVAAIP 287 (884)
T ss_pred HhccC--CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hh----cCC-----------HHHHHHHHHHHHHHHcc
Confidence 88765 5668999999999999988776655554444322 11 111 23467788999999999
Q ss_pred CChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCC
Q 004437 324 EGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDP 403 (753)
Q Consensus 324 ~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~ 403 (753)
|+||++++++++.+++||+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+.. .+...+++
T Consensus 288 ~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~-----~~~~~~~~ 362 (884)
T TIGR01522 288 EGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTM-----LNAVSLNQ 362 (884)
T ss_pred chHHHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEee-----ccCCccCC
Confidence 9999999999999999999999999999999999999999999999999999999999875532110 00111111
Q ss_pred CCCCcc-c--CCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhh
Q 004437 404 KDGGIV-D--WPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480 (753)
Q Consensus 404 ~~~~~~-~--~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~ 480 (753)
. +... + ......++....++.++++||++.....+. ...|+|+|.|++.++.+.|+...
T Consensus 363 ~-~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~--~~~g~p~e~All~~~~~~~~~~~--------------- 424 (884)
T TIGR01522 363 F-GEVIVDGDVLHGFYTVAVSRILEAGNLCNNAKFRNEAD--TLLGNPTDVALIELLMKFGLDDL--------------- 424 (884)
T ss_pred C-CcccccccccccccCHHHHHHHHHHhhhCCCeecCCCC--CcCCChHHHHHHHHHHHcCcHhH---------------
Confidence 1 0000 0 000111234567888899999876543322 23589999999999987665310
Q ss_pred cccccccccccccccccccceeeeecCCCCCceEEEEEecC-CCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHH
Q 004437 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREP-TGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQ 559 (753)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~ 559 (753)
+..++.++++||+|.||||+++++.. ++++++|+||+||.++.+|+.+...+|...+++++.++
T Consensus 425 ---------------~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~ 489 (884)
T TIGR01522 425 ---------------RETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRD 489 (884)
T ss_pred ---------------HhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHH
Confidence 23466789999999999999998763 46788999999999999999887777888889999999
Q ss_pred HHHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHh
Q 004437 560 LMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRG 639 (753)
Q Consensus 560 ~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~ 639 (753)
.+.+.+++++++|+||+++|||.. +.+|+|+|+++++||+|++++++|++|++
T Consensus 490 ~i~~~~~~~a~~G~rvl~~A~~~~---------------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~ 542 (884)
T TIGR01522 490 VIQEEAAEMASAGLRVIAFASGPE---------------------------KGQLTFLGLVGINDPPRPGVKEAVTTLIT 542 (884)
T ss_pred HHHHHHHHHHhcCCEEEEEEEEcC---------------------------CCCeEEEEEEeccCcchhHHHHHHHHHHH
Confidence 999999999999999999999752 35799999999999999999999999999
Q ss_pred CCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHc
Q 004437 640 AGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEM 719 (753)
Q Consensus 640 ~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~ 719 (753)
+|++++|+|||+..+|.++|+++||.... ..+++|+++..+.++++.+.+.+ ..+|+|++|+||..+|+.+|+.
T Consensus 543 ~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~----~~~v~g~~l~~~~~~~l~~~~~~--~~Vfar~~P~~K~~iv~~lq~~ 616 (884)
T TIGR01522 543 GGVRIIMITGDSQETAVSIARRLGMPSKT----SQSVSGEKLDAMDDQQLSQIVPK--VAVFARASPEHKMKIVKALQKR 616 (884)
T ss_pred CCCeEEEECCCCHHHHHHHHHHcCCCCCC----CceeEhHHhHhCCHHHHHHHhhc--CeEEEECCHHHHHHHHHHHHHC
Confidence 99999999999999999999999997543 24679999999999998888887 6899999999999999999999
Q ss_pred CCeEEEEcCCcccHHHhhhcCceEecCCCCccC
Q 004437 720 GEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 720 ~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~ 752 (753)
|+.|+|+|||.||+|||++||||||||.+|+|+
T Consensus 617 g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~v 649 (884)
T TIGR01522 617 GDVVAMTGDGVNDAPALKLADIGVAMGQTGTDV 649 (884)
T ss_pred CCEEEEECCCcccHHHHHhCCeeEecCCCcCHH
Confidence 999999999999999999999999999778775
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-103 Score=922.78 Aligned_cols=628 Identities=30% Similarity=0.483 Sum_probs=531.2
Q ss_pred ccccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCC
Q 004437 7 PAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSD 86 (753)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (753)
..|..+++++++.|+++ .+|||++|+++|+++||+|+++.++++++|+.+++||+++++++++++++++++++++....
T Consensus 26 ~~~~~~~~~v~~~l~~~-~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~ 104 (903)
T PRK15122 26 REAANSLEETLANLNTH-RQGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPLR 104 (903)
T ss_pred HHHhCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcc
Confidence 45888999999999999 48999999999999999999999888999999999999999999999999999987653210
Q ss_pred CCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCC------eeeeeecCCCCCCCcEEEec
Q 004437 87 SGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDG------YLVPDLPAIGLVPGDIVELG 160 (753)
Q Consensus 87 ~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g------~~~~~i~~~~Lv~GDII~l~ 160 (753)
......|.++++|+++++++.++++++|+|+++++++|+++.+.+++|+||| ++ ++|++++|||||+|.|+
T Consensus 105 --~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~-~~I~~~eLv~GDiV~l~ 181 (903)
T PRK15122 105 --RGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVR-REIPMRELVPGDIVHLS 181 (903)
T ss_pred --CCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeE-EEEEHHHCCCCCEEEEC
Confidence 0111368899999999999999999999999999999999999999999995 66 57999999999999999
Q ss_pred CCCcccccEEEEEeeCCcEEEEcccccCCCCccccCCCC----------CcCCcccccccccEEEeecEEEeeeEEEEEE
Q 004437 161 VGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSP----------VFLDDCELQAKENMVFAGTTVVNGSCVCIVI 230 (753)
Q Consensus 161 ~G~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~----------~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~ 230 (753)
+||.|||||+|+++ +.+.||||+|||||.|+.|.+.+ ...++.+..+.+|++|+||.+.+|.++++|+
T Consensus 182 ~Gd~IPaDg~li~g--~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~ 259 (903)
T PRK15122 182 AGDMIPADVRLIES--RDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVV 259 (903)
T ss_pred CCCEEeeeEEEEEc--CceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEE
Confidence 99999999999984 56899999999999999998621 1112344556789999999999999999999
Q ss_pred EEccchhHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHH
Q 004437 231 NTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYY 310 (753)
Q Consensus 231 ~tG~~t~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (753)
+||.+|.+|++.+.+.+ ...++|+++.++++..++..++++++.+++++.... . ..+...
T Consensus 260 atG~~T~~gkI~~~v~~---~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~------~-----------~~~~~~ 319 (903)
T PRK15122 260 ATGSRTYFGSLAKSIVG---TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT------K-----------GDWLEA 319 (903)
T ss_pred EeccccHhhHHHHHhcC---CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc------c-----------CCHHHH
Confidence 99999999999998865 456789999999999888777766665554442210 0 122446
Q ss_pred HHHHHHHHHHhccCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccce
Q 004437 311 FKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTI 390 (753)
Q Consensus 311 l~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~ 390 (753)
+.+++++++++|||+||++++++++.++.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+.
T Consensus 320 l~~aisl~V~~~Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~---- 395 (903)
T PRK15122 320 LLFALAVAVGLTPEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSG---- 395 (903)
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCC----
Confidence 7788999999999999999999999999999999999999999999999999999999999999999998763221
Q ss_pred eeeeeecCcccCCCCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcc
Q 004437 391 SRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNK 470 (753)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~ 470 (753)
.. + .+++..+++|... . ...+||+|.|++.++.+.+....
T Consensus 396 ----------~~--------------~---~~~l~~a~l~s~~----~----~~~~~p~e~All~~a~~~~~~~~----- 435 (903)
T PRK15122 396 ----------RK--------------D---ERVLQLAWLNSFH----Q----SGMKNLMDQAVVAFAEGNPEIVK----- 435 (903)
T ss_pred ----------CC--------------h---HHHHHHHHHhCCC----C----CCCCChHHHHHHHHHHHcCchhh-----
Confidence 00 0 1233333333210 0 23579999999999877553210
Q ss_pred cchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCce
Q 004437 471 ISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSV 550 (753)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~ 550 (753)
...++.+.++||++.+|+|+++++..++++++++||+||.++++|++.. .+|..
T Consensus 436 -------------------------~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~ 489 (903)
T PRK15122 436 -------------------------PAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVR-DGDTV 489 (903)
T ss_pred -------------------------hhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhh-cCCCe
Confidence 2345678899999999999999987677889999999999999999765 46777
Q ss_pred eeCCHHHHHHHHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchh
Q 004437 551 VPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGV 630 (753)
Q Consensus 551 ~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~ 630 (753)
.+++++.++++.+..++++++|+||+++|||....+... .......|+|++|+|+++|+||+|+++
T Consensus 490 ~~l~~~~~~~i~~~~~~~a~~G~rvlavA~k~~~~~~~~--------------~~~~~~~e~~l~~lGli~l~Dp~R~~a 555 (903)
T PRK15122 490 RPLDEARRERLLALAEAYNADGFRVLLVATREIPGGESR--------------AQYSTADERDLVIRGFLTFLDPPKESA 555 (903)
T ss_pred ecCCHHHHHHHHHHHHHHHhCCCEEEEEEEeccCccccc--------------cccccccccCcEEEEEEeccCccHHHH
Confidence 899999999999999999999999999999974321100 001123478999999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHH
Q 004437 631 DKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQ 710 (753)
Q Consensus 631 ~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 710 (753)
+++|++|+++||+|+|+|||+..+|.++|+++||.. ..+++|.++..+.++++.+.+.+ ..||+|++|+||.
T Consensus 556 ~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~------~~vi~G~el~~~~~~el~~~v~~--~~VfAr~sPe~K~ 627 (903)
T PRK15122 556 APAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP------GEPLLGTEIEAMDDAALAREVEE--RTVFAKLTPLQKS 627 (903)
T ss_pred HHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC------CCccchHhhhhCCHHHHHHHhhh--CCEEEEeCHHHHH
Confidence 999999999999999999999999999999999953 35789999999999999998888 6799999999999
Q ss_pred HHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 711 EIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 711 ~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
++|+.||++|+.|+|+|||.||+|||++|||||||| +|+|++
T Consensus 628 ~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvA 669 (903)
T PRK15122 628 RVLKALQANGHTVGFLGDGINDAPALRDADVGISVD-SGADIA 669 (903)
T ss_pred HHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHH
Confidence 999999999999999999999999999999999999 999874
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-103 Score=918.04 Aligned_cols=615 Identities=30% Similarity=0.468 Sum_probs=527.8
Q ss_pred ccccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCC
Q 004437 7 PAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSD 86 (753)
Q Consensus 7 ~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (753)
..|.++.+++++.|+++. +|||++|+++|+++||+|+++.++++++|+.++++|++|++++++++++++++.+
T Consensus 14 ~~~~~~~~~~~~~l~~~~-~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~~------ 86 (867)
T TIGR01524 14 KESQMGKETLLRKLGVHE-TGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLTD------ 86 (867)
T ss_pred HHHhCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHh------
Confidence 458899999999999985 7999999999999999999999888899999999999999999999999998764
Q ss_pred CCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEe------CCeeeeeecCCCCCCCcEEEec
Q 004437 87 SGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLR------DGYLVPDLPAIGLVPGDIVELG 160 (753)
Q Consensus 87 ~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R------~g~~~~~i~~~~Lv~GDII~l~ 160 (753)
.|+++++++++++++.++++++|+|+++++++|+++.+.+++|+| ||++ ++|++++|||||||.|+
T Consensus 87 -------~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~-~~I~~~eLv~GDiV~l~ 158 (867)
T TIGR01524 87 -------DLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSM-DEVPIDALVPGDLIELA 158 (867)
T ss_pred -------hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeE-EEEEhhcCCCCCEEEEC
Confidence 577888999999999999999999999999999999999999999 8998 56999999999999999
Q ss_pred CCCcccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHH
Q 004437 161 VGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240 (753)
Q Consensus 161 ~G~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~ 240 (753)
+||+|||||+|+++ .++.||||+|||||.|+.|.+......+.+..+.+|++|+||.+.+|.++++|++||.+|.+|+
T Consensus 159 ~Gd~VPaDg~li~g--~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gk 236 (867)
T TIGR01524 159 AGDIIPADARVISA--RDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGS 236 (867)
T ss_pred CCCEEcccEEEEec--CceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHH
Confidence 99999999999983 4689999999999999999875433344556677899999999999999999999999999999
Q ss_pred HHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHH
Q 004437 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVA 320 (753)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~ 320 (753)
+.+.+.+ ...++|+++.+++++.++..++++++++++++... . .. .+...+.++++++++
T Consensus 237 i~~~v~~---~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~--~----~~-----------~~~~~~~~al~l~v~ 296 (867)
T TIGR01524 237 LAIAATE---RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL--M----KG-----------DWLEAFLFALAVAVG 296 (867)
T ss_pred HHHHhhC---CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHH--h----cC-----------CHHHHHHHHHHHHHH
Confidence 9998865 34578999999999999988887777666544221 0 01 123467788999999
Q ss_pred hccCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcc
Q 004437 321 AIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTT 400 (753)
Q Consensus 321 ~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~ 400 (753)
+|||+||++++++++.++++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++....
T Consensus 297 ~iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~-------------- 362 (867)
T TIGR01524 297 LTPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG-------------- 362 (867)
T ss_pred hCcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC--------------
Confidence 999999999999999999999999999999999999999999999999999999999998752110
Q ss_pred cCCCCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhh
Q 004437 401 YDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANY 480 (753)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~ 480 (753)
. ...+++.++++|+... ...+||+|.|++.++.+.....
T Consensus 363 ~-----------------~~~~~l~~a~l~~~~~--------~~~~~p~~~Al~~~~~~~~~~~---------------- 401 (867)
T TIGR01524 363 E-----------------TSERVLKMAWLNSYFQ--------TGWKNVLDHAVLAKLDESAARQ---------------- 401 (867)
T ss_pred C-----------------CHHHHHHHHHHhCCCC--------CCCCChHHHHHHHHHHhhchhh----------------
Confidence 0 0123444444443211 1246999999999876421100
Q ss_pred cccccccccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHH
Q 004437 481 LIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQL 560 (753)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~ 560 (753)
....++.+.++||+|.+|+|+++++..++.+++++||+||.++++|+++. .++...+++++.++.
T Consensus 402 --------------~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~-~~~~~~~l~~~~~~~ 466 (867)
T TIGR01524 402 --------------TASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKR-FGGAVVTLSESEKSE 466 (867)
T ss_pred --------------HhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhh-cCCceecCCHHHHHH
Confidence 02356678899999999999999987666678999999999999999774 467778899998999
Q ss_pred HHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhC
Q 004437 561 MLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGA 640 (753)
Q Consensus 561 ~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~ 640 (753)
+.+.+++++++|+||+++|||....+..++ ....|++|+|+|+++|+||+|++++++|++|+++
T Consensus 467 i~~~~~~~a~~G~rvlavA~~~~~~~~~~~----------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~a 530 (867)
T TIGR01524 467 LQDMTAEMNRQGIRVIAVATKTLKVGEADF----------------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKN 530 (867)
T ss_pred HHHHHHHHHhcCCEEEEEEEeccCcccccc----------------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHC
Confidence 999999999999999999999743211000 0112679999999999999999999999999999
Q ss_pred CCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcC
Q 004437 641 GIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG 720 (753)
Q Consensus 641 gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~ 720 (753)
||+|+|+|||+..+|.++|+++||.. ..+++|.++..+.++++.+.+.+ ..+|+|++|+||.++|+.+|++|
T Consensus 531 GI~vvmiTGD~~~tA~aIA~~lGI~~------~~v~~g~~l~~~~~~el~~~~~~--~~vfAr~~Pe~K~~iV~~lq~~G 602 (867)
T TIGR01524 531 GINVKVLTGDNEIVTARICQEVGIDA------NDFLLGADIEELSDEELARELRK--YHIFARLTPMQKSRIIGLLKKAG 602 (867)
T ss_pred CCEEEEEcCCCHHHHHHHHHHcCCCC------CCeeecHhhhhCCHHHHHHHhhh--CeEEEECCHHHHHHHHHHHHhCC
Confidence 99999999999999999999999953 24789999999999999888888 68999999999999999999999
Q ss_pred CeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 721 EVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 721 ~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
+.|+|+|||.||+|||++|||||||| +|+|++
T Consensus 603 ~vVam~GDGvNDapALk~AdVGIAmg-~gtdvA 634 (867)
T TIGR01524 603 HTVGFLGDGINDAPALRKADVGISVD-TAADIA 634 (867)
T ss_pred CEEEEECCCcccHHHHHhCCEEEEeC-CccHHH
Confidence 99999999999999999999999999 999874
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-99 Score=894.13 Aligned_cols=657 Identities=56% Similarity=0.864 Sum_probs=531.8
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEE
Q 004437 57 VLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKV 136 (753)
Q Consensus 57 l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V 136 (753)
+++||+++++++++++++++++++++.. +......|+++++|+++++++.++++++|+|+++.+++|+++.+.+++|
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~---~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~V 77 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEE---GEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKV 77 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccc---cccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEE
Confidence 4789999999999999999999886542 1122347999999999999999999999999999999999999999999
Q ss_pred EeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEe
Q 004437 137 LRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFA 216 (753)
Q Consensus 137 ~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~ 216 (753)
+|||++ ++|++++|||||||.|++||.|||||+|+++ +++.||||+|||||.|+.|.+.....++....+++|++|+
T Consensus 78 iRdg~~-~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~--~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~ 154 (917)
T TIGR01116 78 LRDGRW-SVIKAKDLVPGDIVELAVGDKVPADIRVLSL--KTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFS 154 (917)
T ss_pred EECCEE-EEEEHHHCCCCCEEEECCCCEeeccEEEEEe--cceEEEcccccCCCCcccccccccCccccCcccccceeee
Confidence 999999 5699999999999999999999999999984 5799999999999999999875433333445567899999
Q ss_pred ecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCC
Q 004437 217 GTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGW 296 (753)
Q Consensus 217 Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (753)
||.+.+|+++++|++||.+|.+|++.+.+.++ +.+++|+++++++++.+++.+++++++++|++....+.......+|
T Consensus 155 GT~v~~G~~~~~V~~tG~~T~~gki~~~~~~~--~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 232 (917)
T TIGR01116 155 GTLVVAGKARGVVVRTGMSTEIGKIRDEMRAA--EQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGW 232 (917)
T ss_pred CCEEecceEEEEEEEeCCCCHHHHHHHHhhcc--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchh
Confidence 99999999999999999999999999988665 5678999999999999998888777777766543221111001112
Q ss_pred CcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCce
Q 004437 297 PANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQM 376 (753)
Q Consensus 297 ~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~ 376 (753)
+..+...+..++++++++||++||+++++++++++++|+++|+++|+++++|+||++|+||||||||||+|+|
T Consensus 233 -------~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m 305 (917)
T TIGR01116 233 -------IQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQM 305 (917)
T ss_pred -------HHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeE
Confidence 2334456667889999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEcCcccceeeeeeecCcccCCCCCCcccCC--CCCccHHHHHHHHHHhhccCCeeecCC--CcceecCCchHHH
Q 004437 377 SVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWP--CYNMDANLQAMAKICAVCNDAGVYCDG--PLFRATGLPTEAA 452 (753)
Q Consensus 377 ~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~c~~~~~~~~~--~~~~~~~~p~e~a 452 (753)
+|.+++..+........+...+..|+|......+.. ....++....++.++++||++.+..++ ..+...|+|+|.|
T Consensus 306 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~A 385 (917)
T TIGR01116 306 SVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAA 385 (917)
T ss_pred EEEEEEecCCcccccceEEecCCccCCCccccccCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHH
Confidence 999999876433222233344444555321111000 001124467788899999998765432 2244579999999
Q ss_pred HHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCC
Q 004437 453 LKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGS 532 (753)
Q Consensus 453 l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa 532 (753)
|+.++.+.|+............. ..+.....+..+++++++||+|+||||+++++.. +++++|+|||
T Consensus 386 Ll~~~~~~g~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~-~~~~~~~KGA 452 (917)
T TIGR01116 386 LKVLVEKMGLPATKNGVSSKRRP------------ALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPS-TGNKLFVKGA 452 (917)
T ss_pred HHHHHHHcCCCchhccccccccc------------ccchhHHHHhhcceeeecccChhhCeEEEEEeeC-CcEEEEEcCC
Confidence 99999998876543321110000 0000001145678899999999999999999864 6689999999
Q ss_pred hHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhh-ccceEEEEEEeccccccccccccCcccccccCCCcccccCC
Q 004437 533 VESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSS-KGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIE 611 (753)
Q Consensus 533 ~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 611 (753)
||.|+++|+.+..+||...|++++.++.+.+.+++|++ +|+||+++|||....+..... ..+...++.+|
T Consensus 453 pe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~---------~~~~~~~~~~e 523 (917)
T TIGR01116 453 PEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDL---------LSDPANFEAIE 523 (917)
T ss_pred hHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccc---------cccchhhhhhc
Confidence 99999999988877788899999999999999999999 999999999998543221110 00112335678
Q ss_pred CCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHH
Q 004437 612 SDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIE 691 (753)
Q Consensus 612 ~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (753)
+||+|+|+++++||+|++++++|++|+++|++++|+|||+..+|.++|+++|+..+...+....++|.++..+.+++..+
T Consensus 524 ~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~ 603 (917)
T TIGR01116 524 SDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRA 603 (917)
T ss_pred CCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999876555445678999999988887777
Q ss_pred HHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 692 ALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 692 ~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
...+ ..|++|++|+||.++|+.+|+.|+.|+|+|||.||+|||++|||||||| +|+|++
T Consensus 604 ~~~~--~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~a 662 (917)
T TIGR01116 604 ACRS--AVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVA 662 (917)
T ss_pred hhhc--CeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHH
Confidence 6665 6899999999999999999999999999999999999999999999999 998763
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-98 Score=868.98 Aligned_cols=565 Identities=33% Similarity=0.503 Sum_probs=487.0
Q ss_pred CCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhhhhHHHHHH
Q 004437 27 GLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILV 106 (753)
Q Consensus 27 GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 106 (753)
|||++|+++|+++||+|+++. +++++|+.++++|++|++++++++++++++++ .|.++++++++++
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~-~~~~~~~~~~~~~~~~~~~lL~~aa~~s~~~~-------------~~~~~~~i~~~~~ 66 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPE-KKVSPLLKFLGFFWNPLSWVMEAAAIIAIALE-------------NWVDFVIILGLLL 66 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCC-CCCCHHHHHHHHHhchHHHHHHHHHHHHHhhc-------------chhhhhhhhhhhH
Confidence 899999999999999999987 45678899999999999999999999998774 4778888999999
Q ss_pred HHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEEeeCCcEEEEcccc
Q 004437 107 LNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSL 186 (753)
Q Consensus 107 i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s~~~~Vdes~l 186 (753)
++..+++++|+++++.+++|+++.+++++|+|||++ ++|++++|||||||.|++||+|||||+|+++ .++.||||+|
T Consensus 67 i~~~i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~-~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g--~~~~VDeS~L 143 (755)
T TIGR01647 67 LNATIGFIEENKAGNAVEALKQSLAPKARVLRDGKW-QEIPASELVPGDVVRLKIGDIVPADCRLFEG--DYIQVDQAAL 143 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCEE-EEEEhhhCcCCCEEEECCCCEEeceEEEEec--CceEEEcccc
Confidence 999999999999999999999999999999999999 5799999999999999999999999999983 3499999999
Q ss_pred cCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCCCChhHHHHHHHHH
Q 004437 187 TGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGN 266 (753)
Q Consensus 187 tGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~ 266 (753)
||||.|+.|.+ +|.+|+||.+.+|+++++|++||.+|.+|++.+.++++ +..++|+++.+++++.
T Consensus 144 TGES~PV~K~~-------------~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~--~~~~~~lq~~~~~i~~ 208 (755)
T TIGR01647 144 TGESLPVTKKT-------------GDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQST--ETGSGHLQKILSKIGL 208 (755)
T ss_pred cCCccceEecc-------------CCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhcc--CCCCCcHHHHHHHHHH
Confidence 99999999987 78999999999999999999999999999999998766 5567899999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHhcccc
Q 004437 267 RLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNA 346 (753)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~i 346 (753)
++++++++++++++++++... . ..+...+.+++++++++|||+||++++++++.++++|+|+|+
T Consensus 209 ~~~~~~~~~~~i~~~~~~~~~-----~-----------~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gi 272 (755)
T TIGR01647 209 FLIVLIGVLVLIELVVLFFGR-----G-----------ESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKA 272 (755)
T ss_pred HHHHHHHHHHHHHHHHHHHHc-----C-----------CCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCe
Confidence 999888887777766533210 0 112456778899999999999999999999999999999999
Q ss_pred ccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCCCCccHHHHHHHHH
Q 004437 347 IVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKI 426 (753)
Q Consensus 347 lvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (753)
++|+++++|+||.+|++|||||||||+|+|+|.+++..+.. ++ ..+++..
T Consensus 273 lvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~-------------~~-----------------~~~~l~~ 322 (755)
T TIGR01647 273 IVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNG-------------FD-----------------KDDVLLY 322 (755)
T ss_pred EEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCC-------------CC-----------------HHHHHHH
Confidence 99999999999999999999999999999999998754210 00 1234555
Q ss_pred HhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeec
Q 004437 427 CAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLE 506 (753)
Q Consensus 427 ~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (753)
+++|++ ...+||+|.|+++++.+.+. . ...++++..+|
T Consensus 323 a~~~~~----------~~~~~pi~~Ai~~~~~~~~~----~----------------------------~~~~~~~~~~p 360 (755)
T TIGR01647 323 AALASR----------EEDQDAIDTAVLGSAKDLKE----A----------------------------RDGYKVLEFVP 360 (755)
T ss_pred HHHhCC----------CCCCChHHHHHHHHHHHhHH----H----------------------------HhcCceEEEec
Confidence 565642 23469999999998764320 0 23456778899
Q ss_pred CCCCCceEEEEEecCC-CeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEecccc
Q 004437 507 FDRIRKSMSVIVREPT-GHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELG 585 (753)
Q Consensus 507 F~s~~k~~sviv~~~~-~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~ 585 (753)
|++.+|+|+++++..+ |+.++++||+||.++++|+.. .+.++++.+.+++++++|+|++++|||+
T Consensus 361 f~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~~~~~~~~~~~~~G~rvl~vA~~~--- 426 (755)
T TIGR01647 361 FDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNK-----------KEIEEKVEEKVDELASRGYRALGVARTD--- 426 (755)
T ss_pred cCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCc-----------HHHHHHHHHHHHHHHhCCCEEEEEEEEc---
Confidence 9999999999998654 677889999999999999742 3456778888899999999999999973
Q ss_pred ccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 586 EFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
.|++|+|+|+++|+||+|++++++|++|+++||+|+|+|||+..+|.++|+++||.
T Consensus 427 ------------------------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~ 482 (755)
T TIGR01647 427 ------------------------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLG 482 (755)
T ss_pred ------------------------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 14689999999999999999999999999999999999999999999999999996
Q ss_pred CCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEec
Q 004437 666 SGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAM 745 (753)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 745 (753)
... .-.....+|++.+.+.++++.+.+.+ ..+|+|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||
T Consensus 483 ~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~--~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm 559 (755)
T TIGR01647 483 TNI-YTADVLLKGDNRDDLPSGELGEMVED--ADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAV 559 (755)
T ss_pred CCC-cCHHHhcCCcchhhCCHHHHHHHHHh--CCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEe
Confidence 421 11112334555567778888888888 579999999999999999999999999999999999999999999999
Q ss_pred CCCCccCC
Q 004437 746 GITGTEVI 753 (753)
Q Consensus 746 gi~g~~~~ 753 (753)
| +|+|++
T Consensus 560 ~-~gtdvA 566 (755)
T TIGR01647 560 A-GATDAA 566 (755)
T ss_pred c-CCcHHH
Confidence 9 999864
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-97 Score=886.29 Aligned_cols=624 Identities=24% Similarity=0.328 Sum_probs=485.7
Q ss_pred CCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhhhhHHHH
Q 004437 25 DKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLI 104 (753)
Q Consensus 25 ~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 104 (753)
..||+++|+++|+++||+|+++.+ .+++|++++++|.+|++++++++.+++++.. +|+++++++++
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~-~~s~~~ll~~~~~~p~~i~~i~~~~l~~~~~-------------~~~~~~~i~~i 202 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIP-VPSFLELLKEEVLHPFYVFQVFSVILWLLDE-------------YYYYSLCIVFM 202 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecC-CCCHHHHHHHHHhchHHHHHHHHHHHHHhhh-------------hHHHHHHHHHH
Confidence 479999999999999999999886 4799999999999999988887765554321 57788999999
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEec--CCCcccccEEEEEeeCCcEEEE
Q 004437 105 LVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELG--VGDKVPADMRVAALKTSSLRVE 182 (753)
Q Consensus 105 ~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~--~G~~iPaD~~vl~~~s~~~~Vd 182 (753)
++++.+++.++++|+.+.++++.. .+..++|+|||+| ++|++++|||||||.|+ +|+.|||||+|++ |++.||
T Consensus 203 ~~~~~~~~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~-~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~---g~~~Vd 277 (1054)
T TIGR01657 203 SSTSISLSVYQIRKQMQRLRDMVH-KPQSVIVIRNGKW-VTIASDELVPGDIVSIPRPEEKTMPCDSVLLS---GSCIVN 277 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-CCeeEEEEECCEE-EEEEcccCCCCCEEEEecCCCCEecceEEEEe---CcEEEe
Confidence 999999999999999888888764 4578999999999 56999999999999999 9999999999997 789999
Q ss_pred cccccCCCCccccCCCCCc-CCc----ccccccccEEEeecEEEe-------eeEEEEEEEEccchhHHHHHHHHhhhcc
Q 004437 183 QSSLTGEAMPILKGTSPVF-LDD----CELQAKENMVFAGTTVVN-------GSCVCIVINTGMNTEIGKIQKQIHDASL 250 (753)
Q Consensus 183 es~ltGEs~pv~K~~~~~~-~~~----~~~~~~~~~l~~Gt~v~~-------g~~~~~V~~tG~~t~~g~~~~~~~~~~~ 250 (753)
||+|||||.|+.|.+.+.. .++ ....+++|++|+||.+++ |.+.++|++||.+|..|++.+.+...
T Consensus 278 ES~LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~-- 355 (1054)
T TIGR01657 278 ESMLTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYP-- 355 (1054)
T ss_pred cccccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCC--
Confidence 9999999999999875431 111 123457899999999995 78999999999999999999998765
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHH
Q 004437 251 EESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVI 330 (753)
Q Consensus 251 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~ 330 (753)
....+++++...++...+..++++.++++++..+ . .+. .+...+..+++++++++|++||+++
T Consensus 356 ~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~~---~-----~~~---------~~~~~~l~~l~iiv~~vP~~LP~~~ 418 (1054)
T TIGR01657 356 KPRVFKFYKDSFKFILFLAVLALIGFIYTIIELI---K-----DGR---------PLGKIILRSLDIITIVVPPALPAEL 418 (1054)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH---H-----cCC---------cHHHHHHHHHHHHHhhcCchHHHHH
Confidence 4567888888777765554444333332222211 0 011 1245677889999999999999999
Q ss_pred HHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCccc
Q 004437 331 TTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVD 410 (753)
Q Consensus 331 ~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (753)
++++++++.||+|+|++||++.++|.+|++|++|||||||||+|+|+|.+++..+...... ....+.
T Consensus 419 ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~-------~~~~~~------ 485 (1054)
T TIGR01657 419 SIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFL-------KIVTED------ 485 (1054)
T ss_pred HHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccc-------cccccc------
Confidence 9999999999999999999999999999999999999999999999999998654311000 000000
Q ss_pred CCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccc
Q 004437 411 WPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLG 490 (753)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (753)
.......+..+++.||+..... + ...|||+|.|+++++.. ......+........ ....
T Consensus 486 -----~~~~~~~~~~~~a~C~~~~~~~-~---~~~Gdp~E~al~~~~~~---~~~~~~~~~~~~~~~-------~~i~-- 544 (1054)
T TIGR01657 486 -----SSLKPSITHKALATCHSLTKLE-G---KLVGDPLDKKMFEATGW---TLEEDDESAEPTSIL-------AVVR-- 544 (1054)
T ss_pred -----cccCchHHHHHHHhCCeeEEEC-C---EEecCHHHHHHHHhCCC---EEECCCCcccccccc-------ccee--
Confidence 0011234566789999875432 2 46799999999987532 111100000000000 0000
Q ss_pred cccccccccceeeeecCCCCCceEEEEEecCC-CeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhh
Q 004437 491 CCEWWTKRSKRVATLEFDRIRKSMSVIVREPT-GHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMS 569 (753)
Q Consensus 491 ~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~-~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 569 (753)
.......+++++++||+|++||||++++..+ +++++|+|||||.|+++|++. ..++.+.+.+++|+
T Consensus 545 -~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~------------~~p~~~~~~~~~~a 611 (1054)
T TIGR01657 545 -TDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE------------TVPSDYQEVLKSYT 611 (1054)
T ss_pred -ccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc------------CCChhHHHHHHHHH
Confidence 0000245788999999999999999998754 567899999999999999842 12456778899999
Q ss_pred hccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcC
Q 004437 570 SKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITG 649 (753)
Q Consensus 570 ~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TG 649 (753)
++|+|||++|||.......+. .....++.+|+||+|+|+++|+||+|++++++|++|+++||+++|+||
T Consensus 612 ~~G~RVLalA~k~l~~~~~~~-----------~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTG 680 (1054)
T TIGR01657 612 REGYRVLALAYKELPKLTLQK-----------AQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITG 680 (1054)
T ss_pred hcCCEEEEEEEeecCccchhh-----------hhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECC
Confidence 999999999999754210000 001134567899999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHcCCCCCCCcc-------------------------------------------------ccccccchh
Q 004437 650 DNKSTAEAICRQIKLFSGNEDL-------------------------------------------------TGRSFTGKE 680 (753)
Q Consensus 650 d~~~~a~~ia~~~gi~~~~~~~-------------------------------------------------~~~~~~~~~ 680 (753)
|+..||.++|+++||..+...+ ...+++|++
T Consensus 681 D~~~TA~~iA~~~gii~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~ 760 (1054)
T TIGR01657 681 DNPLTAVHVARECGIVNPSNTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKA 760 (1054)
T ss_pred CCHHHHHHHHHHcCCCCCCceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHH
Confidence 9999999999999997543110 024677887
Q ss_pred hhcc---CHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 681 FMAL---SSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 681 ~~~~---~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
+..+ .++++.+++.+ ..||||++|+||.++|+.+|+.|+.|+|+|||+||+||||+||||||||
T Consensus 761 l~~l~~~~~~~l~~~~~~--~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~ 827 (1054)
T TIGR01657 761 FAVLQAHSPELLLRLLSH--TTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLS 827 (1054)
T ss_pred HHHHHHhhHHHHHHHHhc--CeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeec
Confidence 7653 34566667766 5799999999999999999999999999999999999999999999999
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-95 Score=777.24 Aligned_cols=674 Identities=31% Similarity=0.484 Sum_probs=565.4
Q ss_pred CcccccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccC
Q 004437 5 PFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHS 84 (753)
Q Consensus 5 ~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~ 84 (753)
.+..|+|+++||+++|+++..+|||..++.+++.+.|+|..++|+..+-|..+.+|+.+.+.+++|++++++++.+.+..
T Consensus 36 ~~~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~ 115 (1019)
T KOG0203|consen 36 SMDDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQA 115 (1019)
T ss_pred eeccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhc
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999998776655
Q ss_pred CCCCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCc
Q 004437 85 SDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDK 164 (753)
Q Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~ 164 (753)
+.....+....+.++++..++++..++.++|+.+..+.++.++.+.|..++|+|||.. +.+..++||+||++.++-||+
T Consensus 116 s~~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k-~~i~~eelVvGD~v~vk~Gdr 194 (1019)
T KOG0203|consen 116 STEDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEK-MTINAEELVVGDLVEVKGGDR 194 (1019)
T ss_pred ccCCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeeccee-EEechhhcccccceeeccCCc
Confidence 4333333445666788888888889999999999999999999999999999999999 569999999999999999999
Q ss_pred ccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHH
Q 004437 165 VPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQ 244 (753)
Q Consensus 165 iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~ 244 (753)
||||.+++++ ..++||+|+|||||+|..+.+.... ...++..|+.|.+|.+++|.+.++|++||.+|.+|+++.+
T Consensus 195 VPADiRiis~--~g~~vdnsslTGesEP~~~~~~~t~---~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l 269 (1019)
T KOG0203|consen 195 VPADIRIISA--TGCKVDNSSLTGESEPQTRSPEFTH---ENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASL 269 (1019)
T ss_pred ccceeEEEEe--cceeEeccccccccCCccCCccccc---cCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhh
Confidence 9999999986 7899999999999999998874332 2337779999999999999999999999999999999987
Q ss_pred HhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccC
Q 004437 245 IHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPE 324 (753)
Q Consensus 245 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~ 324 (753)
... .+..++|+++.+.++..++...++++.+.+|++...... +| ..++.+.++++++.+|+
T Consensus 270 ~~~--~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~gy------~~-----------l~avv~~i~iivAnvPe 330 (1019)
T KOG0203|consen 270 ASG--LEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILGY------EW-----------LRAVVFLIGIIVANVPE 330 (1019)
T ss_pred hcc--CCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhcc------hh-----------HHHhhhhheeEEecCcC
Confidence 643 267899999999999998888887777777765442211 11 23444578899999999
Q ss_pred ChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCC
Q 004437 325 GLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPK 404 (753)
Q Consensus 325 ~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 404 (753)
+|+..++.++....+||+++++++|++++.|+||..++||+|||||||+|+|+|.++|..+.........+..+..+
T Consensus 331 GL~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~--- 407 (1019)
T KOG0203|consen 331 GLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSF--- 407 (1019)
T ss_pred CccceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccc---
Confidence 99999999999999999999999999999999999999999999999999999999998765321111000000000
Q ss_pred CCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCC-----cceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhh
Q 004437 405 DGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGP-----LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAAN 479 (753)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~-----~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~ 479 (753)
...++....+.+++.+||.+.+...+. .....|++.|.||+++++-.-...
T Consensus 408 ---------~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~--------------- 463 (1019)
T KOG0203|consen 408 ---------DKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV--------------- 463 (1019)
T ss_pred ---------cccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH---------------
Confidence 112456789999999999988764331 234678999999999987532211
Q ss_pred hcccccccccccccccccccceeeeecCCCCCceEEEEEecCC---CeEEEEEcCChHHHHHhcccccccCCceeeCCHH
Q 004437 480 YLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPT---GHNQLLVKGSVESLLERSSHVQLADGSVVPLDEP 556 (753)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~---~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~ 556 (753)
+..+++.+.+.++||+|.+|+.-.+.+..+ .++.+.+||+||.++++|+.+.. +|+..|++++
T Consensus 464 -------------~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i-~g~e~pld~~ 529 (1019)
T KOG0203|consen 464 -------------MELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILI-NGEEKPLDEK 529 (1019)
T ss_pred -------------HHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceee-cCCCCCcCHH
Confidence 111667888899999999999999988655 46778899999999999999876 6788999999
Q ss_pred HHHHHHHHHHHhhhccceEEEEEEeccccc-cccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHH
Q 004437 557 CWQLMLSRHLEMSSKGLRCLGMAYKDELGE-FSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAID 635 (753)
Q Consensus 557 ~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~ 635 (753)
.++.+.+...++...|.||++|+++....+ |.... . ++......--.+|.|+|++++-||+|..+++|+.
T Consensus 530 ~~~~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~--------~-f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~ 600 (1019)
T KOG0203|consen 530 LKEAFQEAYLELGGLGERVLGFCDLELPDEKFPRGF--------Q-FDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVG 600 (1019)
T ss_pred HHHHHHHHHHHhhhcchHHHHHHHHhcchhcCCCce--------E-eecCCCCCcchhccccchhhccCCCcccCchhhh
Confidence 999999999999999999999999874422 21110 0 0001111123589999999999999999999999
Q ss_pred HHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCcc--------------------ccccccchhhhccCHHHHHHHHHh
Q 004437 636 DCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDL--------------------TGRSFTGKEFMALSSTQQIEALSK 695 (753)
Q Consensus 636 ~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~ 695 (753)
+|+.+||||+|+|||++.||.++|++.||....... ...+++|.++..+.++++.+++..
T Consensus 601 ~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~n 680 (1019)
T KOG0203|consen 601 KCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQN 680 (1019)
T ss_pred hhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHh
Confidence 999999999999999999999999999987633221 234689999999999999999999
Q ss_pred cCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 696 HGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 696 ~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
+...||||.+|+||..||+.+|++|..|+++|||.||+||||.|||||||||.|+|+.
T Consensus 681 h~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvs 738 (1019)
T KOG0203|consen 681 HQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVS 738 (1019)
T ss_pred CCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceeeccccchHH
Confidence 8889999999999999999999999999999999999999999999999999999973
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-91 Score=840.30 Aligned_cols=668 Identities=25% Similarity=0.292 Sum_probs=499.8
Q ss_pred cCCCccCCCCCccH---HHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhhhhHHHHHHHHHHHHHHhh
Q 004437 40 YGWNELDKEKGKPL---WQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQE 116 (753)
Q Consensus 40 yG~N~i~~~~~~~~---~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e 116 (753)
|.+|.+...|++.+ ++.+|+||+++.|+||++++++++++.+.... .+...+.++++++++.+.+.+++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~--------~~t~~~pL~~v~~~~~~~~~~ed 72 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTY--------RGTSIVPLAFVLIVTAIKEAIED 72 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCC--------ccHhHHhHHHHHHHHHHHHHHHH
Confidence 67899999888775 89999999999999999999999987653221 12223345555557778888999
Q ss_pred hHHHHHHHHHHhhcccccEEEeC-CeeeeeecCCCCCCCcEEEecCCCcccccEEEEEeeC--CcEEEEcccccCCCCcc
Q 004437 117 SNAEKALEALKKIQCESGKVLRD-GYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKT--SSLRVEQSSLTGEAMPI 193 (753)
Q Consensus 117 ~~~~~~~~~l~~~~~~~~~V~R~-g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s--~~~~Vdes~ltGEs~pv 193 (753)
+++.++.+++ +.+.++|+|+ |++ ++++|++|+|||||.|++||.||||++|+.+++ |.++||||+|||||+|+
T Consensus 73 ~~r~~~d~~~---n~~~~~v~~~~~~~-~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~ 148 (1057)
T TIGR01652 73 IRRRRRDKEV---NNRLTEVLEGHGQF-VEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLK 148 (1057)
T ss_pred HHHHHhHHHH---hCcEEEEECCCCcE-EEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecce
Confidence 9888877654 4578999997 788 469999999999999999999999999998644 67999999999999999
Q ss_pred ccCCCCCcC-------------------C----------------cccccccccEEEeecEEEe-eeEEEEEEEEccchh
Q 004437 194 LKGTSPVFL-------------------D----------------DCELQAKENMVFAGTTVVN-GSCVCIVINTGMNTE 237 (753)
Q Consensus 194 ~K~~~~~~~-------------------~----------------~~~~~~~~~~l~~Gt~v~~-g~~~~~V~~tG~~t~ 237 (753)
.|.+.+... + +....+.+|++|+||.+.+ |+++|+|++||.+|+
T Consensus 149 ~k~~~~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk 228 (1057)
T TIGR01652 149 LRQALEETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTK 228 (1057)
T ss_pred EeecchhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhh
Confidence 998643210 0 1123456899999999999 899999999999999
Q ss_pred HHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCc----ccccchhhHHHHHHH
Q 004437 238 IGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPA----NVQFSFEKCTYYFKI 313 (753)
Q Consensus 238 ~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~ 313 (753)
+++.... .+.+.+++++.++++..+++.+.+++|++++++...+... .....|.. ........+...+..
T Consensus 229 ~~~n~~~-----~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~-~~~~~~yl~~~~~~~~~~~~~~~~~~~ 302 (1057)
T TIGR01652 229 LMRNATQ-----APSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDA-HGKDLWYIRLDVSERNAAANGFFSFLT 302 (1057)
T ss_pred hhhcCCC-----CcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecc-cCCCccceecCcccccchhHHHHHHHH
Confidence 9775422 2567899999999999888888888887777653322110 00112210 001111233446777
Q ss_pred HHHHHHHhccCChhHHHHHHHHHHH------HHHhcc----ccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEE
Q 004437 314 AVALAVAAIPEGLPAVITTCLALGT------RKMAQK----NAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFT 383 (753)
Q Consensus 314 ~i~llv~~iP~~L~~~~~~~~~~~~------~~l~k~----~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~ 383 (753)
++.++..++|++|++.++++...++ .+|.++ ++++|+.+.+|+||+|++||+|||||||+|+|++++++.
T Consensus 303 ~~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i 382 (1057)
T TIGR01652 303 FLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSI 382 (1057)
T ss_pred HHHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEE
Confidence 8899999999999999999999998 778764 599999999999999999999999999999999999998
Q ss_pred cCcccceeeee----eecC-cccCCC------CCC--------cccC--CCCCccHHHHHHHHHHhhccCCeeec-CCC-
Q 004437 384 LGRKTTISRIF----HVEG-TTYDPK------DGG--------IVDW--PCYNMDANLQAMAKICAVCNDAGVYC-DGP- 440 (753)
Q Consensus 384 ~~~~~~~~~~~----~~~~-~~~~~~------~~~--------~~~~--~~~~~~~~~~~~~~~~~~c~~~~~~~-~~~- 440 (753)
.+..|+..... ..+. ..+.+. +.. +... ......+...+++.++++||++.+.. +++
T Consensus 383 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~ 462 (1057)
T TIGR01652 383 AGVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGP 462 (1057)
T ss_pred CCEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCC
Confidence 87655421100 0000 000000 000 0000 00111234678899999999987764 221
Q ss_pred --cceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEE
Q 004437 441 --LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIV 518 (753)
Q Consensus 441 --~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv 518 (753)
..+..++|+|.|++.+|+..|+....++.+..... ++ .......+++++.+||+|+||||||++
T Consensus 463 ~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~------i~--------~~~~~~~~~il~~~pF~s~rKrmSviv 528 (1057)
T TIGR01652 463 EEITYQAASPDEAALVKAARDVGFVFFERTPKSISLL------IE--------MHGETKEYEILNVLEFNSDRKRMSVIV 528 (1057)
T ss_pred CceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEE------EE--------eCCCEEEEEEEEecccCCCCCeEEEEE
Confidence 23446899999999999999988765432210000 00 000145688999999999999999999
Q ss_pred ecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEecccc-ccccccccCccc
Q 004437 519 REPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELG-EFSDYYSESHPA 597 (753)
Q Consensus 519 ~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~-~~~~~~~~~~~~ 597 (753)
+.+++++++|+|||||.|+++|+. .+++.++.+.+++++|+.+|+||+++|||...+ ++.+|..++..+
T Consensus 529 ~~~~~~~~l~~KGA~e~il~~~~~----------~~~~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a 598 (1057)
T TIGR01652 529 RNPDGRIKLLCKGADTVIFKRLSS----------GGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEA 598 (1057)
T ss_pred EeCCCeEEEEEeCcHHHHHHHhhc----------cchhHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHH
Confidence 988888899999999999999974 123456788899999999999999999998543 344443332221
Q ss_pred ccccCC-----CcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCcc-
Q 004437 598 HKKLLD-----PSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDL- 671 (753)
Q Consensus 598 ~~~~~~-----~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~- 671 (753)
.....+ ...+..+|+||+|+|+++++|++|++++++|+.|+++||+|||+|||+.+||.++|++||+.......
T Consensus 599 ~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~ 678 (1057)
T TIGR01652 599 STALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQI 678 (1057)
T ss_pred HhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEE
Confidence 111111 11234678999999999999999999999999999999999999999999999999999998754321
Q ss_pred ------------------------------------ccccccchhhhccCHHH----HHHHHHhcCCeEEEeeCchhHHH
Q 004437 672 ------------------------------------TGRSFTGKEFMALSSTQ----QIEALSKHGGKVFSRAEPRHKQE 711 (753)
Q Consensus 672 ------------------------------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~v~~~~~p~~K~~ 711 (753)
...+++|+.+..+.+++ +.+++..+...|+||++|+||.+
T Consensus 679 ~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~ 758 (1057)
T TIGR01652 679 VITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKAD 758 (1057)
T ss_pred EEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHH
Confidence 01367888777554432 34456677678999999999999
Q ss_pred HHHHHHHc-CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 712 IVRMLKEM-GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 712 ~v~~l~~~-~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
+|+.+|+. |+.|+|+|||.||++||++|||||+ +.|.|
T Consensus 759 IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIg--i~g~e 797 (1057)
T TIGR01652 759 VVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVG--ISGKE 797 (1057)
T ss_pred HHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeE--ecChH
Confidence 99999998 9999999999999999999999994 45554
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-89 Score=810.43 Aligned_cols=670 Identities=21% Similarity=0.235 Sum_probs=499.9
Q ss_pred HhcCCCccCCCCCcc---HHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhhhhHHHHHHHHHHHHHH
Q 004437 38 ERYGWNELDKEKGKP---LWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVW 114 (753)
Q Consensus 38 ~~yG~N~i~~~~~~~---~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~ 114 (753)
.+|..|.+.+.|++. +++++|+||+++.|+||++++++++++.+.... .+...+.+++++++..+.+.+
T Consensus 85 ~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~--------~~t~~~PL~~vl~v~~ike~~ 156 (1178)
T PLN03190 85 FEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFG--------RGASILPLAFVLLVTAVKDAY 156 (1178)
T ss_pred ccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCC--------cchHHHHHHHHHHHHHHHHHH
Confidence 369999999988764 678999999999999999999999988654321 233344555666666677777
Q ss_pred hhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEEeeC--CcEEEEcccccCCCCc
Q 004437 115 QESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKT--SSLRVEQSSLTGEAMP 192 (753)
Q Consensus 115 ~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s--~~~~Vdes~ltGEs~p 192 (753)
+++++.++.++. +++.++|+|+|++. +++|++|+|||||.|++||.||||++|++++. |.++||||+||||+.|
T Consensus 157 Ed~~r~k~d~~~---N~~~~~v~~~~~~~-~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~ 232 (1178)
T PLN03190 157 EDWRRHRSDRIE---NNRLAWVLVDDQFQ-EKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNL 232 (1178)
T ss_pred HHHHHHHhHHhh---cCcEEEEEECCeEE-EEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeee
Confidence 777777766554 35678999999994 69999999999999999999999999997643 7799999999999999
Q ss_pred cccCCCCCcC-----------------C---------------cccccccccEEEeecEEEee-eEEEEEEEEccchhHH
Q 004437 193 ILKGTSPVFL-----------------D---------------DCELQAKENMVFAGTTVVNG-SCVCIVINTGMNTEIG 239 (753)
Q Consensus 193 v~K~~~~~~~-----------------~---------------~~~~~~~~~~l~~Gt~v~~g-~~~~~V~~tG~~t~~g 239 (753)
+.|.+.+... + .....+.+|++++|+.+.++ +++|+|++||.+|++.
T Consensus 233 k~k~~~~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK~~ 312 (1178)
T PLN03190 233 KTRYAKQETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETKAM 312 (1178)
T ss_pred eEecccchhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhhHh
Confidence 9998643211 0 01134568999999999987 8999999999999964
Q ss_pred HHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc---ccCCCCcc----------ccc-c-h
Q 004437 240 KIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWD---VVDGWPAN----------VQF-S-F 304 (753)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~----------~~~-~-~ 304 (753)
+.. .....+.+++++.+|++..+++.+.+++|++++++...|..... .+.+|... ..+ . .
T Consensus 313 ~N~-----~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~ 387 (1178)
T PLN03190 313 LNN-----SGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWG 387 (1178)
T ss_pred hcC-----CCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhh
Confidence 432 22246789999999999988888888888777665322211000 00111100 000 0 0
Q ss_pred hhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHhccc----------cccccchhhhhcCCeeEEeeCCCcccccC
Q 004437 305 EKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKN----------AIVRKLPSVETLGCTTVICSDKTGTLTTN 374 (753)
Q Consensus 305 ~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~----------ilvk~~~~le~lg~v~~i~~DKTGTLT~~ 374 (753)
......+..++.++..++|++|++.++++....+.+|.++. +.||+.+.+|+||+|++||+|||||||+|
T Consensus 388 ~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N 467 (1178)
T PLN03190 388 WEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTEN 467 (1178)
T ss_pred HHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccc
Confidence 11123344456677789999999999999988777776543 77999999999999999999999999999
Q ss_pred ceEEEEEEEcCcccceeeee----------eecCcccCCCCCC-----cccC---C-CCCccHHHHHHHHHHhhccCCee
Q 004437 375 QMSVTEFFTLGRKTTISRIF----------HVEGTTYDPKDGG-----IVDW---P-CYNMDANLQAMAKICAVCNDAGV 435 (753)
Q Consensus 375 ~~~v~~i~~~~~~~~~~~~~----------~~~~~~~~~~~~~-----~~~~---~-~~~~~~~~~~~~~~~~~c~~~~~ 435 (753)
+|.+++++..+..|+..... ...+..+.|.... .... . .......+.+++.++++||++.+
T Consensus 468 ~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~ 547 (1178)
T PLN03190 468 KMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVP 547 (1178)
T ss_pred eEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCcee
Confidence 99999999987766432100 0011111111000 0000 0 00112346789999999999876
Q ss_pred ec-CC--C-----cceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecC
Q 004437 436 YC-DG--P-----LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEF 507 (753)
Q Consensus 436 ~~-~~--~-----~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F 507 (753)
.. ++ + ..+..++|+|.||+.+|.+.|+.+..+.......... ..+..+++++.+||
T Consensus 548 ~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~----------------~~~~~~~il~~~pF 611 (1178)
T PLN03190 548 IVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIH----------------GERQRFNVLGLHEF 611 (1178)
T ss_pred eccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeec----------------cceecceeEEEecc
Confidence 42 11 1 1244559999999999999999887765443221111 12567899999999
Q ss_pred CCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEeccc-cc
Q 004437 508 DRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDEL-GE 586 (753)
Q Consensus 508 ~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~-~~ 586 (753)
+|+||||||+++.+++++++|+|||||.|+++|+... +++.++.+.+++++|+++|+|||++|||..+ .+
T Consensus 612 ~S~rKrMSvIv~~~~~~~~l~~KGA~e~il~~~~~~~---------~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e 682 (1178)
T PLN03190 612 DSDRKRMSVILGCPDKTVKVFVKGADTSMFSVIDRSL---------NMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSE 682 (1178)
T ss_pred cccccEEEEEEEcCCCcEEEEEecCcHHHHHhhcccc---------cchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHH
Confidence 9999999999998888899999999999999997532 2345677889999999999999999999964 34
Q ss_pred cccccccCcccccccCC-----CcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH
Q 004437 587 FSDYYSESHPAHKKLLD-----PSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ 661 (753)
Q Consensus 587 ~~~~~~~~~~~~~~~~~-----~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~ 661 (753)
+.+|..++..+.....+ ......+|+||+++|+++++|++|++++++|++|+++||+|||+|||+.+||.+||++
T Consensus 683 ~~~~~~~~~~a~~~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s 762 (1178)
T PLN03190 683 FEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYS 762 (1178)
T ss_pred HhhHHHHHHHhhhhhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
Confidence 55554433222111111 1233567999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcc---------------------------------------------ccccccchhhhccCH----HHHHHH
Q 004437 662 IKLFSGNEDL---------------------------------------------TGRSFTGKEFMALSS----TQQIEA 692 (753)
Q Consensus 662 ~gi~~~~~~~---------------------------------------------~~~~~~~~~~~~~~~----~~~~~~ 692 (753)
|||..+.... ...+++|..+..+.+ +.+.++
T Consensus 763 ~~Ll~~~~~~i~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l 842 (1178)
T PLN03190 763 SKLLTNKMTQIIINSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQL 842 (1178)
T ss_pred hCCCCCCCeeEEecCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHH
Confidence 9997654210 114567777766654 455667
Q ss_pred HHhcCCeEEEeeCchhHHHHHHHHHHc-CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 693 LSKHGGKVFSRAEPRHKQEIVRMLKEM-GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 693 ~~~~~~~v~~~~~p~~K~~~v~~l~~~-~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
..+|...|+||++|.||.++|+.+|+. ++.|+|+|||+||++||++||||| ||.|+|
T Consensus 843 ~~~~~~VI~cR~sP~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGI--GIsG~E 900 (1178)
T PLN03190 843 ASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGV--GISGQE 900 (1178)
T ss_pred HHhCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeee--eecCch
Confidence 778877899999999999999999998 589999999999999999999999 888877
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-88 Score=731.11 Aligned_cols=647 Identities=22% Similarity=0.317 Sum_probs=480.2
Q ss_pred CCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhhhhHHH
Q 004437 24 LDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVL 103 (753)
Q Consensus 24 ~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 103 (753)
..+||+..++.+|+..||+|.+..+ .++++.++.++--+|+.++ .++++++|+..+ +|+++.+|++
T Consensus 157 ~~~gL~~~~~~~r~~iyG~N~i~l~-ik~i~~iLv~EvL~PfYlF----Q~fSv~lW~~d~---------Y~~YA~cI~i 222 (1140)
T KOG0208|consen 157 VSNGLERQEIIDRRIIYGRNVISLP-IKSISQILVKEVLNPFYLF----QAFSVALWLADS---------YYYYAFCIVI 222 (1140)
T ss_pred ccCCccHHHHHhHHhhcCCceeeee-cccHHHHHHHhccchHHHH----HhHHhhhhhccc---------chhhhhHHHH
Confidence 4689999999999999999999886 5889999998877776554 455566665433 5667888888
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecC-CCcccccEEEEEeeCCcEEEE
Q 004437 104 ILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGV-GDKVPADMRVAALKTSSLRVE 182 (753)
Q Consensus 104 ~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~-G~~iPaD~~vl~~~s~~~~Vd 182 (753)
+.+.+.++..|+.++..+.++++-+. ...++|+|+|.| ++|.++|||||||+.+.+ |-..|||+++++ |+|.||
T Consensus 223 isv~Si~~sv~e~r~qs~rlr~mv~~-~~~V~V~R~g~~-~ti~S~eLVPGDil~i~~~~~~~PcDa~Li~---g~civN 297 (1140)
T KOG0208|consen 223 ISVYSIVLSVYETRKQSIRLRSMVKF-TCPVTVIRDGFW-ETVDSSELVPGDILYIPPPGKIMPCDALLIS---GDCIVN 297 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEECCEE-EEEeccccccccEEEECCCCeEeecceEEEe---CcEEee
Confidence 88999999999999888888877654 357899999999 579999999999999998 899999999997 999999
Q ss_pred cccccCCCCccccCCCCCcCCc------ccccccccEEEeecEEEe------eeEEEEEEEEccchhHHHHHHHHhhhcc
Q 004437 183 QSSLTGEAMPILKGTSPVFLDD------CELQAKENMVFAGTTVVN------GSCVCIVINTGMNTEIGKIQKQIHDASL 250 (753)
Q Consensus 183 es~ltGEs~pv~K~~~~~~~~~------~~~~~~~~~l~~Gt~v~~------g~~~~~V~~tG~~t~~g~~~~~~~~~~~ 250 (753)
||+|||||.|+.|.+.+..... ....+..|.+|+||.+++ +.+.++|++||.+|..|++.+.+.++
T Consensus 298 EsmLTGESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyP-- 375 (1140)
T KOG0208|consen 298 ESMLTGESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYP-- 375 (1140)
T ss_pred cccccCCcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCC--
Confidence 9999999999999987622111 223456899999999986 47999999999999999999998764
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHH
Q 004437 251 EESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVI 330 (753)
Q Consensus 251 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~ 330 (753)
++.++ ++-+-+..++.++.+++++.++.....+.. .+. .....+.+++.++...+|++||.++
T Consensus 376 --kP~~f--kfyrds~~fi~~l~~ia~~gfiy~~i~l~~----~g~---------~~~~iiirsLDliTi~VPPALPAal 438 (1140)
T KOG0208|consen 376 --KPVNF--KFYRDSFKFILFLVIIALIGFIYTAIVLNL----LGV---------PLKTIIIRSLDLITIVVPPALPAAL 438 (1140)
T ss_pred --CCccc--HHHHHHHHHHHHHHHHHHHHHHHHhHhHHH----cCC---------CHHHHhhhhhcEEEEecCCCchhhh
Confidence 33333 444444455555555555555543322211 111 1134567788999999999999999
Q ss_pred HHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeee-ecCcccCCCCCCcc
Q 004437 331 TTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFH-VEGTTYDPKDGGIV 409 (753)
Q Consensus 331 ~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 409 (753)
++...++..||.|+||+|.++..+...|++|++|||||||||++.+.+-.+.............. ...... +...
T Consensus 439 tvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~~~~~----~~~~ 514 (1140)
T KOG0208|consen 439 TVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVTEDSL----QLFY 514 (1140)
T ss_pred hHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhhhhhc----ccee
Confidence 99999999999999999999999999999999999999999999999999887543211110000 000000 0000
Q ss_pred cCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhccccccccc
Q 004437 410 DWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRL 489 (753)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (753)
.....+.....-.+..+++.||....... ...|+|.|.-+.+.. |+......... ..........+...+.
T Consensus 515 ~l~~~~~~~~~~~~~~a~atCHSL~~v~g----~l~GDPLdlkmfe~t---~w~~ee~~~~~--~~~~~~~~~~p~v~~p 585 (1140)
T KOG0208|consen 515 KLSLRSSSLPMGNLVAAMATCHSLTLVDG----TLVGDPLDLKMFEST---GWVYEEADIED--EATREFNTLIPTVVRP 585 (1140)
T ss_pred eccccccCCchHHHHHHHhhhceeEEeCC----eeccCceeeeeeecc---ceEEEeccccc--hhhhhhCCccCCEeCC
Confidence 00000111113467788899995433322 457888886655433 33332211000 0000000111111111
Q ss_pred cc------ccccccccceeeeecCCCCCceEEEEEecCC-CeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHH
Q 004437 490 GC------CEWWTKRSKRVATLEFDRIRKSMSVIVREPT-GHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLML 562 (753)
Q Consensus 490 ~~------~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~-~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~ 562 (753)
.. .+...+.+.+++.+||+|..+|||||++.+. .+.++|+|||||.|.+.|++.. .+..++
T Consensus 586 ~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~t------------vP~dy~ 653 (1140)
T KOG0208|consen 586 PENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPET------------VPADYQ 653 (1140)
T ss_pred CcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCccc------------CCccHH
Confidence 11 1111236889999999999999999999764 6789999999999999997643 245688
Q ss_pred HHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCC
Q 004437 563 SRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGI 642 (753)
Q Consensus 563 ~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi 642 (753)
+.++.|+.+|+||||+|+|..... .|.+ .....|+.+|+||+|+|++.|++++|++++.+|++|+++.|
T Consensus 654 evl~~Yt~~GfRVIAlA~K~L~~~--~~~~---------~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnI 722 (1140)
T KOG0208|consen 654 EVLKEYTHQGFRVIALASKELETS--TLQK---------AQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANI 722 (1140)
T ss_pred HHHHHHHhCCeEEEEEecCccCcc--hHHH---------HhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcc
Confidence 899999999999999999985432 1111 11236788999999999999999999999999999999999
Q ss_pred eEEEEcCCChHHHHHHHHHcCCCCCCCccc--------------------------------------------------
Q 004437 643 EVMVITGDNKSTAEAICRQIKLFSGNEDLT-------------------------------------------------- 672 (753)
Q Consensus 643 ~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~-------------------------------------------------- 672 (753)
+++|+|||+..||..+||+||+..+...+.
T Consensus 723 RtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 802 (1140)
T KOG0208|consen 723 RTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKD 802 (1140)
T ss_pred eEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccce
Confidence 999999999999999999999987543210
Q ss_pred -cccccchhhhccC---HHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 673 -GRSFTGKEFMALS---STQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 673 -~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
...++|+.|..+. .+...+++.+ ..|||||+|.||.++|+.||+.|+.|+|+|||+||+.|||+|||||+++
T Consensus 803 yhlA~sG~~f~~i~~~~~~l~~~Il~~--~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLS 878 (1140)
T KOG0208|consen 803 YHLAMSGKTFQVILEHFPELVPKILLK--GTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLS 878 (1140)
T ss_pred eEEEecCchhHHHHhhcHHHHHHHHhc--CeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchh
Confidence 0124555555443 2334455666 6899999999999999999999999999999999999999999999998
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-83 Score=717.97 Aligned_cols=507 Identities=25% Similarity=0.333 Sum_probs=413.9
Q ss_pred HHhhhhHHHHHHHHHHHHHHHhhccCCC-CCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhccc-ccEE
Q 004437 59 EQFDDTLVKILLVAAFISFILAYFHSSD-SGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCE-SGKV 136 (753)
Q Consensus 59 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~-~~~V 136 (753)
.||++|+.++++++++++++++++.... +.......|...+.+++.+++..+++.++++|+++.++.|+++.++ +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 4678999999999999999987653211 0111123445555566666777778889999999999999998875 6999
Q ss_pred EeCCe-eeeeecCCCCCCCcEEEecCCCcccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEE
Q 004437 137 LRDGY-LVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVF 215 (753)
Q Consensus 137 ~R~g~-~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~ 215 (753)
+|+|+ + ++|++++|++||+|.|++||.|||||+|++ |.+.||||+|||||.|+.|.+.. ..+.+|
T Consensus 109 ir~g~~~-~~V~~~eL~~GDiV~v~~Gd~IPaDG~vie---G~a~VDESaLTGES~PV~K~~G~----------~~~~V~ 174 (679)
T PRK01122 109 LREPGAA-EEVPATELRKGDIVLVEAGEIIPADGEVIE---GVASVDESAITGESAPVIRESGG----------DFSSVT 174 (679)
T ss_pred EECCCEE-EEEEHHHcCCCCEEEEcCCCEEEEEEEEEE---ccEEEEcccccCCCCceEeCCCC----------ccCeEE
Confidence 99988 6 579999999999999999999999999998 67899999999999999998731 123499
Q ss_pred eecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCC
Q 004437 216 AGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDG 295 (753)
Q Consensus 216 ~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (753)
+||.+.+|++.++|+++|.+|.+|++.++++.+ +.+++|++..++.+...++.++++++++++.+.+ +. +
T Consensus 175 aGT~v~~G~~~i~Vta~g~~S~lgki~~lve~a--~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~--~~------g 244 (679)
T PRK01122 175 GGTRVLSDWIVIRITANPGESFLDRMIALVEGA--KRQKTPNEIALTILLAGLTIIFLLVVATLPPFAA--YS------G 244 (679)
T ss_pred eceEEEeeeEEEEEEEecccCHHHHHHHHHHhc--cccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHH--Hh------C
Confidence 999999999999999999999999999999876 5678999988887766665544443333332211 11 1
Q ss_pred CCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCc
Q 004437 296 WPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQ 375 (753)
Q Consensus 296 ~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~ 375 (753)
+ ...+.+++++++++|||+|+...+.....++.||+++|+++|+.+++|+||++|++|||||||||+|+
T Consensus 245 ~-----------~~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~ 313 (679)
T PRK01122 245 G-----------ALSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGN 313 (679)
T ss_pred c-----------hHHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCc
Confidence 1 12466788999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHH
Q 004437 376 MSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKV 455 (753)
Q Consensus 376 ~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~ 455 (753)
|.+.+++..+. . ..+.++.++++|+. ...||...|++.
T Consensus 314 ~~v~~~~~~~~--------------~-----------------~~~~ll~~a~~~s~-----------~s~hP~~~AIv~ 351 (679)
T PRK01122 314 RQASEFLPVPG--------------V-----------------TEEELADAAQLSSL-----------ADETPEGRSIVV 351 (679)
T ss_pred EEEEEEEeCCC--------------C-----------------CHHHHHHHHHHhcC-----------CCCCchHHHHHH
Confidence 99998764321 0 01345666666653 234799999999
Q ss_pred HHHH-cCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChH
Q 004437 456 LVEK-MGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVE 534 (753)
Q Consensus 456 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e 534 (753)
++++ .+.... ...+.....+||++.+++|++.+. | ..|.||++|
T Consensus 352 ~a~~~~~~~~~------------------------------~~~~~~~~~~pF~s~~~~~gv~~~---g--~~~~kGa~e 396 (679)
T PRK01122 352 LAKQRFNLRER------------------------------DLQSLHATFVPFSAQTRMSGVDLD---G--REIRKGAVD 396 (679)
T ss_pred HHHhhcCCCch------------------------------hhccccceeEeecCcCceEEEEEC---C--EEEEECCHH
Confidence 9876 232110 112345677899999888887653 3 578999999
Q ss_pred HHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCe
Q 004437 535 SLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDL 614 (753)
Q Consensus 535 ~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l 614 (753)
.+++.|.. +|... ++.+.+.+++++++|+|++++|+ |+
T Consensus 397 ~il~~~~~----~g~~~------~~~~~~~~~~~a~~G~~~l~va~--------------------------------~~ 434 (679)
T PRK01122 397 AIRRYVES----NGGHF------PAELDAAVDEVARKGGTPLVVAE--------------------------------DN 434 (679)
T ss_pred HHHHHHHh----cCCcC------hHHHHHHHHHHHhCCCcEEEEEE--------------------------------CC
Confidence 99999964 12111 24566778899999999999985 45
Q ss_pred EEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHH
Q 004437 615 VFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALS 694 (753)
Q Consensus 615 ~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (753)
+++|+++++|++|++++++|++|+++||+++|+|||+..+|.++|+++|+
T Consensus 435 ~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI------------------------------ 484 (679)
T PRK01122 435 RVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV------------------------------ 484 (679)
T ss_pred eEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC------------------------------
Confidence 79999999999999999999999999999999999999999999999999
Q ss_pred hcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 695 KHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 695 ~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
..+++|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||| +|+|++
T Consensus 485 ---d~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvA 539 (679)
T PRK01122 485 ---DDFLAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAA 539 (679)
T ss_pred ---cEEEccCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHH
Confidence 3699999999999999999999999999999999999999999999999 999864
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-82 Score=708.35 Aligned_cols=501 Identities=24% Similarity=0.346 Sum_probs=400.6
Q ss_pred HhhhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhhhhHHHHHHHHHHHHHHh----hhHHHHHHHHHHhhccc-cc
Q 004437 60 QFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQ----ESNAEKALEALKKIQCE-SG 134 (753)
Q Consensus 60 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~----e~~~~~~~~~l~~~~~~-~~ 134 (753)
+|++|+.++++++++++++++.+....+ ..++ ..++++.++++++++.+++.++ |+|++++++.|+++.++ ++
T Consensus 29 ~~~~p~~~il~~aa~ls~~~~~~~~~~~-~~~~-~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 29 MIKNPIMFVVEVGMLLALGLTIYPDLFH-QESV-SRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHChHHHHHHHHHHHHHHHHHHhhhcc-cccc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 4679999999999999998877633111 1111 1345667777777777777777 68899999999998875 67
Q ss_pred E-EEeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccE
Q 004437 135 K-VLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENM 213 (753)
Q Consensus 135 ~-V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~ 213 (753)
+ |.|||++ ++|++++|+|||+|.|++||+|||||+|++ |...||||+|||||.|+.|.+.. ..+.
T Consensus 107 ~~v~rdg~~-~~I~a~eLv~GDiV~v~~Gd~IPaDG~vie---G~~~VDESaLTGES~PV~K~~g~----------d~~~ 172 (673)
T PRK14010 107 RRIKQDGSY-EMIDASDLKKGHIVRVATGEQIPNDGKVIK---GLATVDESAITGESAPVIKESGG----------DFDN 172 (673)
T ss_pred EEEEeCCEE-EEEEHHHcCCCCEEEECCCCcccCCeEEEE---cceEEecchhcCCCCceeccCCC----------ccCe
Confidence 5 7799998 569999999999999999999999999998 77899999999999999998731 0145
Q ss_pred EEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Q 004437 214 VFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVV 293 (753)
Q Consensus 214 l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (753)
+|+||.+.+|++.++|+++|.+|.+|++.++++.+ +.+++|++..+..+...++. ++++++++++.+..+.
T Consensus 173 V~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a--~~~ktp~e~~l~~l~~~l~i--i~l~~~~~~~~~~~~~----- 243 (673)
T PRK14010 173 VIGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGA--TRKKTPNEIALFTLLMTLTI--IFLVVILTMYPLAKFL----- 243 (673)
T ss_pred eecCceeecceEEEEEEEecccCHHHHHHHHHhhc--cccCCHHHHHHHHHHHHHhH--HHHHHHHHHHHHHhhc-----
Confidence 99999999999999999999999999999999876 56789999776555433322 2222222221110000
Q ss_pred CCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCccccc
Q 004437 294 DGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTT 373 (753)
Q Consensus 294 ~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~ 373 (753)
+ +...+.+.+++++.+|||+|+..++++.+.++.||+|+|+++|+.+++|+||++|++|||||||||+
T Consensus 244 -~-----------~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~ 311 (673)
T PRK14010 244 -N-----------FNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITY 311 (673)
T ss_pred -c-----------HHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCC
Confidence 1 1224556778888899999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHH
Q 004437 374 NQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAAL 453 (753)
Q Consensus 374 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al 453 (753)
|++.+.++...+. ....+++..+.+|+.. ..||++.|+
T Consensus 312 Gn~~~~~~~~~~~-------------------------------~~~~~ll~~a~~~~~~-----------s~~P~~~AI 349 (673)
T PRK14010 312 GNRMADAFIPVKS-------------------------------SSFERLVKAAYESSIA-----------DDTPEGRSI 349 (673)
T ss_pred CCeEEEEEEeCCC-------------------------------ccHHHHHHHHHHhcCC-----------CCChHHHHH
Confidence 8887776543210 0124456666777632 349999999
Q ss_pred HHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCCh
Q 004437 454 KVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSV 533 (753)
Q Consensus 454 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~ 533 (753)
+.++++.++.... .....+||++++|+|++.++ ++ .+.||+|
T Consensus 350 v~~a~~~~~~~~~---------------------------------~~~~~~pF~~~~k~~gv~~~---g~--~i~kGa~ 391 (673)
T PRK14010 350 VKLAYKQHIDLPQ---------------------------------EVGEYIPFTAETRMSGVKFT---TR--EVYKGAP 391 (673)
T ss_pred HHHHHHcCCCchh---------------------------------hhcceeccccccceeEEEEC---CE--EEEECCH
Confidence 9999876543210 01124799999999998753 32 4569999
Q ss_pred HHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCC
Q 004437 534 ESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESD 613 (753)
Q Consensus 534 e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 613 (753)
+.++++|+. ++...|. .+.+..++++++|+|+++++. |
T Consensus 392 ~~il~~~~~----~g~~~~~------~~~~~~~~~a~~G~~~l~v~~--------------------------------~ 429 (673)
T PRK14010 392 NSMVKRVKE----AGGHIPV------DLDALVKGVSKKGGTPLVVLE--------------------------------D 429 (673)
T ss_pred HHHHHHhhh----cCCCCch------HHHHHHHHHHhCCCeEEEEEE--------------------------------C
Confidence 999999985 2222221 245566788999999998752 5
Q ss_pred eEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHH
Q 004437 614 LVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEAL 693 (753)
Q Consensus 614 l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (753)
++++|+++++|++|++++++|++|+++||+++|+|||+..+|.++|+++|+
T Consensus 430 ~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI----------------------------- 480 (673)
T PRK14010 430 NEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV----------------------------- 480 (673)
T ss_pred CEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC-----------------------------
Confidence 689999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 694 SKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 694 ~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
..+++|++|+||.++|+.+|++|+.|+|+|||.||+|||++|||||||| +|+|++
T Consensus 481 ----~~v~A~~~PedK~~iV~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvA 535 (673)
T PRK14010 481 ----DRFVAECKPEDKINVIREEQAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSA 535 (673)
T ss_pred ----ceEEcCCCHHHHHHHHHHHHhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHH
Confidence 3699999999999999999999999999999999999999999999999 999874
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-79 Score=684.71 Aligned_cols=508 Identities=25% Similarity=0.359 Sum_probs=407.3
Q ss_pred HHhhhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhh---hhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccc-c
Q 004437 59 EQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEP---LVIVLILVLNAIVGVWQESNAEKALEALKKIQCES-G 134 (753)
Q Consensus 59 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~-~ 134 (753)
.||++|..++++++++++++++++....+.+.....|++. +++++.+++..+++.++++|+++++++|+++.+++ +
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 4678999999999999999987653211111010135543 33455566777788899999999999999987764 7
Q ss_pred EEEe-CCeeeeeecCCCCCCCcEEEecCCCcccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccE
Q 004437 135 KVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENM 213 (753)
Q Consensus 135 ~V~R-~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~ 213 (753)
+|+| ||++ ++|++++|+|||+|.|++||+|||||+|++ |.+.||||+|||||.|+.|.+... .+.
T Consensus 108 ~vlr~dg~~-~~V~~~~L~~GDiV~V~~Gd~IPaDG~vie---G~~~VDESaLTGES~PV~K~~g~~----------~~~ 173 (675)
T TIGR01497 108 KLLRDDGAI-DKVPADQLKKGDIVLVEAGDVIPCDGEVIE---GVASVDESAITGESAPVIKESGGD----------FAS 173 (675)
T ss_pred EEEeeCCEE-EEEEHHHCCCCCEEEECCCCEEeeeEEEEE---ccEEEEcccccCCCCceeecCCCC----------cce
Confidence 7885 8888 579999999999999999999999999998 789999999999999999987311 124
Q ss_pred EEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc
Q 004437 214 VFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVV 293 (753)
Q Consensus 214 l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (753)
+|+||.+.+|++.++|+++|.+|.+|++.++++.+ +.+++|++..++.+...+..+.+++++++|.+.. |
T Consensus 174 V~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a--~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~~-----~--- 243 (675)
T TIGR01497 174 VTGGTRILSDWLVVECTANPGETFLDRMIALVEGA--QRRKTPNEIALTILLIALTLVFLLVTATLWPFAA-----Y--- 243 (675)
T ss_pred eecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhc--ccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----h---
Confidence 99999999999999999999999999999999876 5678999988887765554443333332222210 0
Q ss_pred CCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCccccc
Q 004437 294 DGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTT 373 (753)
Q Consensus 294 ~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~ 373 (753)
.+. ...+..++++++++|||+|+...+.....++.||+++|+++|+..++|+||++|++|||||||||+
T Consensus 244 ~~~-----------~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~ 312 (675)
T TIGR01497 244 GGN-----------AISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITL 312 (675)
T ss_pred cCh-----------hHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccC
Confidence 000 123556788999999999988888877889999999999999999999999999999999999999
Q ss_pred CceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHH
Q 004437 374 NQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAAL 453 (753)
Q Consensus 374 ~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al 453 (753)
|+|++.+++..+. . ...+++..+++|+. ...||.+.|+
T Consensus 313 g~~~v~~~~~~~~--------------~-----------------~~~~ll~~aa~~~~-----------~s~hP~a~Ai 350 (675)
T TIGR01497 313 GNRLASEFIPAQG--------------V-----------------DEKTLADAAQLASL-----------ADDTPEGKSI 350 (675)
T ss_pred CCeEEEEEEecCC--------------C-----------------cHHHHHHHHHHhcC-----------CCCCcHHHHH
Confidence 9999999874321 0 11345666666653 2358999999
Q ss_pred HHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCCh
Q 004437 454 KVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSV 533 (753)
Q Consensus 454 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~ 533 (753)
+.++++.|..... ..+......||++.++++++.+. +| ..+.||+|
T Consensus 351 v~~a~~~~~~~~~------------------------------~~~~~~~~~pf~~~~~~sg~~~~--~g--~~~~kGa~ 396 (675)
T TIGR01497 351 VILAKQLGIREDD------------------------------VQSLHATFVEFTAQTRMSGINLD--NG--RMIRKGAV 396 (675)
T ss_pred HHHHHHcCCCccc------------------------------cccccceEEEEcCCCcEEEEEEe--CC--eEEEECCH
Confidence 9999876543211 11234567899999877776543 23 57899999
Q ss_pred HHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCC
Q 004437 534 ESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESD 613 (753)
Q Consensus 534 e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 613 (753)
|.+++.|.. +|... +..+.+.+++++++|+|++++|+ |
T Consensus 397 e~i~~~~~~----~g~~~------~~~~~~~~~~~a~~G~r~l~va~--------------------------------~ 434 (675)
T TIGR01497 397 DAIKRHVEA----NGGHI------PTDLDQAVDQVARQGGTPLVVCE--------------------------------D 434 (675)
T ss_pred HHHHHHHHh----cCCCC------cHHHHHHHHHHHhCCCeEEEEEE--------------------------------C
Confidence 999998853 12211 23466778889999999999996 2
Q ss_pred eEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHH
Q 004437 614 LVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEAL 693 (753)
Q Consensus 614 l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (753)
.+++|+++++|++|++++++|++|+++|++++|+|||+..+|.++|+++|+
T Consensus 435 ~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI----------------------------- 485 (675)
T TIGR01497 435 NRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV----------------------------- 485 (675)
T ss_pred CEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC-----------------------------
Confidence 479999999999999999999999999999999999999999999999999
Q ss_pred HhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 694 SKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 694 ~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
..+++|++|++|..+|+.+|++|+.|+|+|||.||+|||++|||||||| +|++++
T Consensus 486 ----~~v~a~~~PedK~~~v~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~a 540 (675)
T TIGR01497 486 ----DDFIAEATPEDKIALIRQEQAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAA 540 (675)
T ss_pred ----CEEEcCCCHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHH
Confidence 4689999999999999999999999999999999999999999999999 998753
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-78 Score=628.02 Aligned_cols=594 Identities=29% Similarity=0.409 Sum_probs=466.9
Q ss_pred ccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCCCC
Q 004437 9 WSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSG 88 (753)
Q Consensus 9 ~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (753)
-+.+++++.++|..+.+ |||++|+++|++.||+|+...++ .+.+..|+.-|.+|+.+..-.+|++...+.--.
T Consensus 19 ~~~p~eeVfeeL~~t~~-GLt~~E~~eRlk~fG~NkleEkk-en~~lKFl~Fm~~PlswVMEaAAimA~~Lang~----- 91 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCTRE-GLTSDEVEERLKIFGPNKLEEKK-ESKFLKFLGFMWNPLSWVMEAAAIMAIGLANGG----- 91 (942)
T ss_pred ccCchhhhHHHHhcCCC-CCchHHHHHHHHhhCchhhhhhh-hhHHHHHHHHHhchHHHHHHHHHHHHHHHhcCC-----
Confidence 46789999999998754 99999999999999999998654 444445556778999999999999887664211
Q ss_pred CCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCccccc
Q 004437 89 DSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPAD 168 (753)
Q Consensus 89 ~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD 168 (753)
....+|.+...|..++++|+.+++++|+++.+....|.+....+.+|+|||+| .+++++.|||||||.++.|++||||
T Consensus 92 -~~~~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw-~E~eAs~lVPGDIlsik~GdIiPaD 169 (942)
T KOG0205|consen 92 -GRPPDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKW-SEQEASILVPGDILSIKLGDIIPAD 169 (942)
T ss_pred -CCCcchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCee-eeeeccccccCceeeeccCCEecCc
Confidence 12347888889999999999999999999999999999888889999999999 5799999999999999999999999
Q ss_pred EEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhh
Q 004437 169 MRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDA 248 (753)
Q Consensus 169 ~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~ 248 (753)
+++++. +.+.||+|.|||||.|+.|.+ ++.+|+||+|.+|++.++|++||.+|..|+-+.++..
T Consensus 170 aRLl~g--D~LkiDQSAlTGESLpvtKh~-------------gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds- 233 (942)
T KOG0205|consen 170 ARLLEG--DPLKIDQSALTGESLPVTKHP-------------GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS- 233 (942)
T ss_pred cceecC--CccccchhhhcCCccccccCC-------------CCceecccccccceEEEEEEEeccceeehhhHHhhcC-
Confidence 999985 689999999999999999988 7889999999999999999999999999999998865
Q ss_pred ccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHH-HHHHhccCChh
Q 004437 249 SLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVA-LAVAAIPEGLP 327 (753)
Q Consensus 249 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~-llv~~iP~~L~ 327 (753)
.....++++.++.+.++++..+++-.++.+++.+ +.. .. ........+. +++..+|.+||
T Consensus 234 --t~~~GHFqkVLt~IGn~ci~si~~g~lie~~vmy--~~q----~R-----------~~r~~i~nLlvllIGgiPiamP 294 (942)
T KOG0205|consen 234 --TNQVGHFQKVLTGIGNFCICSIALGMLIEITVMY--PIQ----HR-----------LYRDGIDNLLVLLIGGIPIAMP 294 (942)
T ss_pred --CCCcccHHHHHHhhhhHHHHHHHHHHHHHHHhhh--hhh----hh-----------hhhhhhhheheeeecccccccc
Confidence 3566788998888877665443332222222211 010 00 0011122233 44455999999
Q ss_pred HHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEE--EEEcCcccceeeeeeecCcccCCCC
Q 004437 328 AVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTE--FFTLGRKTTISRIFHVEGTTYDPKD 405 (753)
Q Consensus 328 ~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~--i~~~~~~~~~~~~~~~~~~~~~~~~ 405 (753)
..++..++.++.||+++|.++++..++|.|+.+|++|+|||||||.|+++|.+ +... .+ ..
T Consensus 295 tVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~-----------v~--gv---- 357 (942)
T KOG0205|consen 295 TVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF-----------VK--GV---- 357 (942)
T ss_pred eeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceee-----------ec--CC----
Confidence 99999999999999999999999999999999999999999999999999977 2110 00 11
Q ss_pred CCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhccccc
Q 004437 406 GGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSS 485 (753)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 485 (753)
++.-..+..|.+. .. ...+-.|.|++..... +
T Consensus 358 -----------~~D~~~L~A~rAs----r~--------en~DAID~A~v~~L~d---P---------------------- 389 (942)
T KOG0205|consen 358 -----------DKDDVLLTAARAS----RK--------ENQDAIDAAIVGMLAD---P---------------------- 389 (942)
T ss_pred -----------ChHHHHHHHHHHh----hh--------cChhhHHHHHHHhhcC---H----------------------
Confidence 1111222222221 11 1125567777665431 1
Q ss_pred ccccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHH
Q 004437 486 TVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRH 565 (753)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~ 565 (753)
+..+..+..++..||++..||.+..+.+++|+.+..+||+||.|++.|+ .+++.++++.+.+
T Consensus 390 -------Keara~ikevhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~-----------~~~~i~~~vh~~i 451 (942)
T KOG0205|consen 390 -------KEARAGIKEVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCN-----------EDHDIPERVHSII 451 (942)
T ss_pred -------HHHhhCceEEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhh-----------ccCcchHHHHHHH
Confidence 1115678889999999999999999999999999999999999999997 3456788899999
Q ss_pred HHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEE
Q 004437 566 LEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVM 645 (753)
Q Consensus 566 ~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~ 645 (753)
++|+++|+|.+++|++...+...+ .-....+|+|+.-+-||+|.++.++|.+..+.|+.|.
T Consensus 452 d~~AeRGlRSLgVArq~v~e~~~~-------------------~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~Vk 512 (942)
T KOG0205|consen 452 DKFAERGLRSLAVARQEVPEKTKE-------------------SPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVK 512 (942)
T ss_pred HHHHHhcchhhhhhhhcccccccc-------------------CCCCCcccccccccCCCCccchHHHHHHHHhccceee
Confidence 999999999999999874432111 1134578999999999999999999999999999999
Q ss_pred EEcCCChHHHHHHHHHcCCCCCCCccccccccchh-hhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEE
Q 004437 646 VITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKE-FMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVA 724 (753)
Q Consensus 646 i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~ 724 (753)
|+|||...-+...++++|+-.+... +..+-|.. -..+...+..+++.+ .+-|+.+.|++|..+|+.||+++|.|+
T Consensus 513 mitgdqlaI~keTgrrlgmgtnmyp--ss~llG~~~~~~~~~~~v~elie~--adgfAgVfpehKy~iV~~Lq~r~hi~g 588 (942)
T KOG0205|consen 513 MITGDQLAIAKETGRRLGMGTNMYP--SSALLGLGKDGSMPGSPVDELIEK--ADGFAGVFPEHKYEIVKILQERKHIVG 588 (942)
T ss_pred eecchHHHHHHhhhhhhccccCcCC--chhhccCCCCCCCCCCcHHHHhhh--ccCccccCHHHHHHHHHHHhhcCceec
Confidence 9999999999999999998542111 11111111 011222233344444 578999999999999999999999999
Q ss_pred EEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 725 MTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 725 ~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
|+|||.||+|+|+.||+|||+. +++|.+
T Consensus 589 mtgdgvndapaLKkAdigiava-~atdaa 616 (942)
T KOG0205|consen 589 MTGDGVNDAPALKKADIGIAVA-DATDAA 616 (942)
T ss_pred ccCCCcccchhhcccccceeec-cchhhh
Confidence 9999999999999999999998 887753
|
|
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-79 Score=694.89 Aligned_cols=670 Identities=24% Similarity=0.274 Sum_probs=519.2
Q ss_pred HHHhcCCCccCCCCCcc---HHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhhhhHHHHHHHHHHHH
Q 004437 36 RRERYGWNELDKEKGKP---LWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVG 112 (753)
Q Consensus 36 r~~~yG~N~i~~~~~~~---~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~ 112 (753)
+...|-.|.|...|++. +++++++||+++.|++|++++++++++ +. + ...|...+.+++++.++.+.+
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~-~-------~~~~~~~~pl~~vl~~t~iKd 98 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LS-P-------FNPYTTLVPLLFVLGITAIKD 98 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cc-c-------cCccceeeceeeeehHHHHHH
Confidence 55699999999988875 689999999999999999999999998 33 2 224556666777788888889
Q ss_pred HHhhhHHHHHHHHHHhhcccccEEEeCCe-eeeeecCCCCCCCcEEEecCCCcccccEEEEEee--CCcEEEEcccccCC
Q 004437 113 VWQESNAEKALEALKKIQCESGKVLRDGY-LVPDLPAIGLVPGDIVELGVGDKVPADMRVAALK--TSSLRVEQSSLTGE 189 (753)
Q Consensus 113 ~~~e~~~~~~~~~l~~~~~~~~~V~R~g~-~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~--s~~~~Vdes~ltGE 189 (753)
.++++|+.+...+++ ..++.|+|++. + .+..|++|++||+|.+..++.+|||.++++++ +|.|+|++++|+||
T Consensus 99 ~~eD~rR~~~D~~iN---~~~~~v~~~~~~~-~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGE 174 (1151)
T KOG0206|consen 99 AIEDYRRHKQDKEVN---NRKVEVLRGDGCF-VEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGE 174 (1151)
T ss_pred HHhhhhhhhccHHhh---cceeEEecCCcee-eeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCc
Confidence 999998888776555 56788998654 5 56999999999999999999999999998753 46699999999999
Q ss_pred CCccccCCCCCcCC---------------------------------ccc-ccccccEEEeecEEEee-eEEEEEEEEcc
Q 004437 190 AMPILKGTSPVFLD---------------------------------DCE-LQAKENMVFAGTTVVNG-SCVCIVINTGM 234 (753)
Q Consensus 190 s~pv~K~~~~~~~~---------------------------------~~~-~~~~~~~l~~Gt~v~~g-~~~~~V~~tG~ 234 (753)
++.+.|........ ... +...++++++|+++.++ ++.++|+.||+
T Consensus 175 tnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~ 254 (1151)
T KOG0206|consen 175 TNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGH 254 (1151)
T ss_pred cccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCC
Confidence 99999975432111 001 55668899999999998 79999999999
Q ss_pred chhHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc--CCCCcccccchhhHHHHHH
Q 004437 235 NTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVV--DGWPANVQFSFEKCTYYFK 312 (753)
Q Consensus 235 ~t~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~ 312 (753)
+|++++.... ...+++++++.++.....++.+.++++++..+....+....... ..|-.............|.
T Consensus 255 dtK~~~n~~~-----~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 329 (1151)
T KOG0206|consen 255 DTKLMQNSGK-----PPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFL 329 (1151)
T ss_pred cchHHHhcCC-----CccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHH
Confidence 9999876532 36788999999999888888777777777665533222110000 0110000001223355677
Q ss_pred HHHHHHHHhccCChhHHHHHHHHHHHHHHh----------ccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEE
Q 004437 313 IAVALAVAAIPEGLPAVITTCLALGTRKMA----------QKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFF 382 (753)
Q Consensus 313 ~~i~llv~~iP~~L~~~~~~~~~~~~~~l~----------k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~ 382 (753)
.++.++...+|.+|++.+.+.....+..+. ...+.+|+.+..|+||+|++|++|||||||+|.|.+.++.
T Consensus 330 t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCs 409 (1151)
T KOG0206|consen 330 TFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCS 409 (1151)
T ss_pred HHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeeccc
Confidence 788888999999999999988877764432 3568899999999999999999999999999999999999
Q ss_pred EcCcccceeeeeee---c-Cc----------ccCCCCCCcccCCC--CCccHHHHHHHHHHhhccCCeeecCC---Ccce
Q 004437 383 TLGRKTTISRIFHV---E-GT----------TYDPKDGGIVDWPC--YNMDANLQAMAKICAVCNDAGVYCDG---PLFR 443 (753)
Q Consensus 383 ~~~~~~~~~~~~~~---~-~~----------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~c~~~~~~~~~---~~~~ 443 (753)
+.+..|+....... . .. ...-.+....+... ....+....+..++++||+..++.++ ...+
T Consensus 410 i~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y 489 (1151)
T KOG0206|consen 410 INGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSY 489 (1151)
T ss_pred ccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceee
Confidence 99887764422100 0 00 00000001111011 12345678899999999998887732 3467
Q ss_pred ecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEEecCCC
Q 004437 444 ATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTG 523 (753)
Q Consensus 444 ~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~ 523 (753)
...+|+|.|++..|+.+|+.+..+..+..+.... + ..+.++++..++|+|.|||||||||.++|
T Consensus 490 ~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~------------g----~~~~y~lL~iLeF~S~RKRMSVIVR~p~g 553 (1151)
T KOG0206|consen 490 EAESPDEAALVEAARELGFVFLGRTPDSVTIREL------------G----VEETYELLNVLEFNSTRKRMSVIVRDPDG 553 (1151)
T ss_pred ecCCCcHHHHHHHHHhcCceeeeccCceEEEecc------------c----cceeEEEEEEeccccccceeEEEEEcCCC
Confidence 7789999999999999999998776554322210 0 25689999999999999999999999999
Q ss_pred eEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEec-cccccccccccCcccccccC
Q 004437 524 HNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKD-ELGEFSDYYSESHPAHKKLL 602 (753)
Q Consensus 524 ~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~-~~~~~~~~~~~~~~~~~~~~ 602 (753)
+..+|||||+.+|.++++. -..+.+++...++++|+.+|+|||++|||. .+++|..|.+.+..+.....
T Consensus 554 ~i~LycKGADsvI~erL~~----------~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~ 623 (1151)
T KOG0206|consen 554 RILLYCKGADSVIFERLSK----------NGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLT 623 (1151)
T ss_pred cEEEEEcCcchhhHhhhhh----------cchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999875 234557788889999999999999999999 45668888877765544443
Q ss_pred C-----CcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCc-------
Q 004437 603 D-----PSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNED------- 670 (753)
Q Consensus 603 ~-----~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~------- 670 (753)
+ ....+.+|+||+++|..++||+++++++++|+.|++||||+|++|||..+||.+|+..|++..++..
T Consensus 624 ~Re~~L~e~ae~iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~ 703 (1151)
T KOG0206|consen 624 DREELLDEVAEEIEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTE 703 (1151)
T ss_pred CHHHHHHHHHHHHHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecC
Confidence 3 2356688999999999999999999999999999999999999999999999999999999875321
Q ss_pred ------------------------------------cccccccchhhhccCHH----HHHHHHHhcCCeEEEeeCchhHH
Q 004437 671 ------------------------------------LTGRSFTGKEFMALSST----QQIEALSKHGGKVFSRAEPRHKQ 710 (753)
Q Consensus 671 ------------------------------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~v~~~~~p~~K~ 710 (753)
-...++.|+.+....+. .+.+....|..+++||++|.||.
T Consensus 704 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA 783 (1151)
T KOG0206|consen 704 TSEELSSLDATAALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKA 783 (1151)
T ss_pred ChhhhcchhhHHHHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHH
Confidence 11234556655433333 34456678889999999999999
Q ss_pred HHHHHHHHc-CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 711 EIVRMLKEM-GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 711 ~~v~~l~~~-~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
.+|+..++. +..+++||||+||++|++.||||| ||+|.|
T Consensus 784 ~Vv~lVk~~~~~~TLAIGDGANDVsMIQ~AhVGV--GIsG~E 823 (1151)
T KOG0206|consen 784 LVVKLVKKGLKAVTLAIGDGANDVSMIQEAHVGV--GISGQE 823 (1151)
T ss_pred HHHHHHHhcCCceEEEeeCCCccchheeeCCcCe--eeccch
Confidence 999999755 889999999999999999999999 777765
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-78 Score=630.99 Aligned_cols=648 Identities=23% Similarity=0.305 Sum_probs=491.2
Q ss_pred HHHHhcCCCccCCCCCcc---HHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhhhh-HHHHHHHHHH
Q 004437 35 KRRERYGWNELDKEKGKP---LWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLV-IVLILVLNAI 110 (753)
Q Consensus 35 ~r~~~yG~N~i~~~~~~~---~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~i~~~ 110 (753)
.++++|.+|.+.+.|++. ++..+++||+-+++++|++.++.++++.+..+. ...|+.+++ ++++.++
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~------l~ty~~pl~fvl~itl~--- 144 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGY------LSTYWGPLGFVLTITLI--- 144 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecc------hhhhhHHHHHHHHHHHH---
Confidence 567788899999887764 678999999999999999999999988764432 223444444 3333334
Q ss_pred HHHHhhhHHHHHHHHHHhhcccccEEE-eCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEEe--eCCcEEEEccccc
Q 004437 111 VGVWQESNAEKALEALKKIQCESGKVL-RDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAAL--KTSSLRVEQSSLT 187 (753)
Q Consensus 111 ~~~~~e~~~~~~~~~l~~~~~~~~~V~-R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~--~s~~~~Vdes~lt 187 (753)
.+.+.+.++.+.....+ .+..+++ |+|-. . .++++|++||+|.++.+++||||++++.. .+|+|++.+..|+
T Consensus 145 keavdd~~r~~rd~~~N---se~y~~ltr~~~~-~-~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLD 219 (1051)
T KOG0210|consen 145 KEAVDDLKRRRRDRELN---SEKYTKLTRDGTR-R-EPSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLD 219 (1051)
T ss_pred HHHHHHHHHHHhhhhhh---hhhheeeccCCcc-c-ccccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccC
Confidence 34444444333333332 3333444 67665 3 59999999999999999999999999976 3678999999999
Q ss_pred CCCCccccCCCCCcCC----------------------------------cccccccccEEEeecEEEeeeEEEEEEEEc
Q 004437 188 GEAMPILKGTSPVFLD----------------------------------DCELQAKENMVFAGTTVVNGSCVCIVINTG 233 (753)
Q Consensus 188 GEs~pv~K~~~~~~~~----------------------------------~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG 233 (753)
||+..+.|-+.|..+. ..+.++-+|.++++|.+.+|.++|+|++||
T Consensus 220 GETDWKLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG 299 (1051)
T KOG0210|consen 220 GETDWKLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTG 299 (1051)
T ss_pred CcccceeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEec
Confidence 9999988877643210 012345589999999999999999999999
Q ss_pred cchhHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHH
Q 004437 234 MNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKI 313 (753)
Q Consensus 234 ~~t~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 313 (753)
.+|... ++.+..+.+-.-++..+|.+.++++.++++++++.....- ..+.| ...+.+
T Consensus 300 ~dtRsv-----MNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g-------~~~~w-----------yi~~~R 356 (1051)
T KOG0210|consen 300 RDTRSV-----MNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKG-------FGSDW-----------YIYIIR 356 (1051)
T ss_pred ccHHHH-----hccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhc-------CCCch-----------HHHHHH
Confidence 999762 2323334445556778888888888777777766544311 11233 345667
Q ss_pred HHHHHHHhccCChhHHHHHHHHHHHHHHhcc----ccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccc
Q 004437 314 AVALAVAAIPEGLPAVITTCLALGTRKMAQK----NAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTT 389 (753)
Q Consensus 314 ~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~----~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~ 389 (753)
++.++...+|.+|-+.+.++...-.+.+... |.++|+....|+||++.++.+|||||||+|+|.+++++.....++
T Consensus 357 fllLFS~IIPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s 436 (1051)
T KOG0210|consen 357 FLLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYS 436 (1051)
T ss_pred HHHHHhhhceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeecc
Confidence 7888899999999999999998877777653 678999999999999999999999999999999999998876554
Q ss_pred eeeeeeec---CcccCC--CCCC-cccCCCCCccHHHHHHHHHHhhccCCeeecCC--CcceecCCchHHHHHHHHHHcC
Q 004437 390 ISRIFHVE---GTTYDP--KDGG-IVDWPCYNMDANLQAMAKICAVCNDAGVYCDG--PLFRATGLPTEAALKVLVEKMG 461 (753)
Q Consensus 390 ~~~~~~~~---~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~--~~~~~~~~p~e~al~~~~~~~g 461 (753)
......+. .+.+.| .++. ............++++..++++||+.++..++ ..-++..+|+|.|++++.+..|
T Consensus 437 ~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VG 516 (1051)
T KOG0210|consen 437 AETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVG 516 (1051)
T ss_pred HhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecc
Confidence 33211110 011111 1111 11112234556788999999999999887665 4566778999999999999999
Q ss_pred CCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEEecC-CCeEEEEEcCChHHHHHhc
Q 004437 462 FPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREP-TGHNQLLVKGSVESLLERS 540 (753)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~-~~~~~~~~KGa~e~il~~c 540 (753)
.....+......... .......|+++..|||+|+.|||++|||++ .++.+.|.|||+.+|...-
T Consensus 517 l~L~~Rd~~~itL~~---------------~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iV 581 (1051)
T KOG0210|consen 517 LKLAKRDRHAITLRV---------------PLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIV 581 (1051)
T ss_pred eEEeecccceEEEec---------------CCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccc
Confidence 988776533222111 111256899999999999999999999987 5889999999998885542
Q ss_pred ccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEeccc-cccccccccCcccccccCCCc------ccccCCCC
Q 004437 541 SHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDEL-GEFSDYYSESHPAHKKLLDPS------CYSTIESD 613 (753)
Q Consensus 541 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~-~~~~~~~~~~~~~~~~~~~~~------~~~~~e~~ 613 (753)
.. -+++++...+|+.+|+|++++|.|... ++|.++...++.+.-...+.. ....+|+|
T Consensus 582 q~---------------NdWleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~d 646 (1051)
T KOG0210|consen 582 QY---------------NDWLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERD 646 (1051)
T ss_pred cc---------------chhhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhh
Confidence 11 246677888999999999999999954 456666666665544433321 12267899
Q ss_pred eEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccc---------------------
Q 004437 614 LVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLT--------------------- 672 (753)
Q Consensus 614 l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~--------------------- 672 (753)
++++|+.|+||+++++++.+++.||+||||+||+|||..+||..+|+..++...+.++.
T Consensus 647 lelL~LTGVEDkLQ~dVk~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k 726 (1051)
T KOG0210|consen 647 LELLGLTGVEDKLQDDVKPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRK 726 (1051)
T ss_pred hHHhcccChHHHHhhhhHhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcC
Confidence 99999999999999999999999999999999999999999999999999988665432
Q ss_pred ---cccccchhhh---ccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHc-CCeEEEEcCCcccHHHhhhcCceEec
Q 004437 673 ---GRSFTGKEFM---ALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEM-GEVVAMTGDGVNDAPALKLADIGVAM 745 (753)
Q Consensus 673 ---~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~-~~~v~~~GDg~ND~~~l~~A~vgiam 745 (753)
..++.|+.+. +..++++.++..++...++||++|.||+++++.+|++ |..|+++|||.||+.|+++||+||
T Consensus 727 ~~~aLvi~G~Sl~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~Gi-- 804 (1051)
T KOG0210|consen 727 TDCALVIDGESLEFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGI-- 804 (1051)
T ss_pred CCcEEEEcCchHHHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccce--
Confidence 3456676654 3345778888889989999999999999999999987 999999999999999999999999
Q ss_pred CCCCcc
Q 004437 746 GITGTE 751 (753)
Q Consensus 746 gi~g~~ 751 (753)
||-|.|
T Consensus 805 GI~gkE 810 (1051)
T KOG0210|consen 805 GIVGKE 810 (1051)
T ss_pred eeeccc
Confidence 777765
|
|
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-75 Score=620.03 Aligned_cols=630 Identities=23% Similarity=0.308 Sum_probs=451.4
Q ss_pred CCcccccCCHHHHHHHhCCCCCCCCCH-HHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhc
Q 004437 4 KPFPAWSWTVEQCLKEYNVKLDKGLSS-REVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYF 82 (753)
Q Consensus 4 ~~~~~~~~~~~~~~~~l~~~~~~GL~~-~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~ 82 (753)
.-|..-+.+.++.+-.|+.+ +|+.. .++..-.++||+|+...+ .++|-+++.+.-..|++.+..++..+++ +
T Consensus 141 ~~F~~~~fp~~~~~g~~~k~--~G~~~~~~i~~a~~~~G~N~fdi~-vPtF~eLFkE~A~aPfFVFQVFcvgLWC----L 213 (1160)
T KOG0209|consen 141 GKFSRLTFPTDEPFGYFQKS--TGHEEESEIKLAKHKYGKNKFDIV-VPTFSELFKEHAVAPFFVFQVFCVGLWC----L 213 (1160)
T ss_pred cceeccccCcCCcchhhhhc--cCcchHHHHHHHHHHhcCCccccC-CccHHHHHHHhccCceeeHhHHhHHHHH----h
Confidence 33444456666766677655 57764 466666677999999875 4667777777766665555554444444 3
Q ss_pred cCCCCCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhh--cccccEEEeCCeeeeeecCCCCCCCcEEEec
Q 004437 83 HSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKI--QCESGKVLRDGYLVPDLPAIGLVPGDIVELG 160 (753)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~--~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~ 160 (753)
+. +||+++..+++++. ++.-.-.++.+.+.+++++ .+..+.|+|+++|+ .+.++||.|||+|.|.
T Consensus 214 De---------yWYySlFtLfMli~---fE~tlV~Qrm~~lse~R~Mg~kpy~I~v~R~kKW~-~l~seeLlPgDvVSI~ 280 (1160)
T KOG0209|consen 214 DE---------YWYYSLFTLFMLIA---FEATLVKQRMRTLSEFRTMGNKPYTINVYRNKKWV-KLMSEELLPGDVVSIG 280 (1160)
T ss_pred HH---------HHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhcCCCceEEEEEecCcce-eccccccCCCceEEec
Confidence 22 46666665554443 2222223334555556655 34578999999995 6999999999999998
Q ss_pred C---CCcccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCc----ccccccccEEEeecEEE------------
Q 004437 161 V---GDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDD----CELQAKENMVFAGTTVV------------ 221 (753)
Q Consensus 161 ~---G~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~----~~~~~~~~~l~~Gt~v~------------ 221 (753)
. ...||||.+++. |+|.|||++|||||.|..|.+....+.+ .+-.++.+++|.||.++
T Consensus 281 r~~ed~~vPCDllLL~---GsciVnEaMLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~ 357 (1160)
T KOG0209|consen 281 RGAEDSHVPCDLLLLR---GSCIVNEAMLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKT 357 (1160)
T ss_pred cCcccCcCCceEEEEe---cceeechhhhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccC
Confidence 7 468999999987 9999999999999999999886654433 22334678999999998
Q ss_pred -eeeEEEEEEEEccchhHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCccc
Q 004437 222 -NGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANV 300 (753)
Q Consensus 222 -~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (753)
+|.+.+.|++||.+|..|++.+.+..+ .++-|.-.+ -+.+|+++.++++++... |. |.....-+..
T Consensus 358 pDggc~a~VlrTGFeTSQGkLvRtilf~--aervTaNn~----Etf~FILFLlVFAiaAa~--Yv----wv~Gskd~~R- 424 (1160)
T KOG0209|consen 358 PDGGCVAYVLRTGFETSQGKLVRTILFS--AERVTANNR----ETFIFILFLLVFAIAAAG--YV----WVEGSKDPTR- 424 (1160)
T ss_pred CCCCeEEEEEeccccccCCceeeeEEec--ceeeeeccH----HHHHHHHHHHHHHHHhhh--eE----EEecccCcch-
Confidence 467999999999999999999988764 222232211 222333344444443322 11 1111111111
Q ss_pred ccchhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEE
Q 004437 301 QFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTE 380 (753)
Q Consensus 301 ~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~ 380 (753)
+-...|.-++.++...+|+-||+-++++...+...|+|.+++|..+-++.-+|+||+.|||||||||+..|.|.+
T Consensus 425 -----srYKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~G 499 (1160)
T KOG0209|consen 425 -----SRYKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEG 499 (1160)
T ss_pred -----hhhheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEe
Confidence 111234445667888999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCcccceeeeeeecCcccCCCCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHc
Q 004437 381 FFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKM 460 (753)
Q Consensus 381 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~ 460 (753)
+........ .....+..| .+-...++.||......+ ...|+|.|.|.++..
T Consensus 500 vag~~~~~~-----~~~~~s~~p-----------------~~t~~vlAscHsLv~le~----~lVGDPlEKA~l~~v--- 550 (1160)
T KOG0209|consen 500 VAGLSADEG-----ALTPASKAP-----------------NETVLVLASCHSLVLLED----KLVGDPLEKATLEAV--- 550 (1160)
T ss_pred cccccCCcc-----cccchhhCC-----------------chHHHHHHHHHHHHHhcC----cccCChHHHHHHHhc---
Confidence 864322100 000000111 112334566765433322 278999999987654
Q ss_pred CCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEEecCC----CeEEEEEcCChHHH
Q 004437 461 GFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPT----GHNQLLVKGSVESL 536 (753)
Q Consensus 461 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~----~~~~~~~KGa~e~i 536 (753)
|+.....+... .+ .......++.+++.|+|..|||||+++... -+++..+|||||.|
T Consensus 551 ~W~~~k~~~v~---------------p~----~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi 611 (1160)
T KOG0209|consen 551 GWNLEKKNSVC---------------PR----EGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVI 611 (1160)
T ss_pred CcccccCcccC---------------CC----cCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHH
Confidence 44333221100 00 000235678899999999999999997643 35788899999999
Q ss_pred HHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEE
Q 004437 537 LERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVF 616 (753)
Q Consensus 537 l~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~ 616 (753)
.++... .+..+++...+|+++|.||+|++||+...-... ......++++|+||+|
T Consensus 612 ~~ml~d--------------vP~dY~~iYk~ytR~GsRVLALg~K~l~~~~~~-----------q~rd~~Re~vEsdLtF 666 (1160)
T KOG0209|consen 612 QEMLRD--------------VPKDYDEIYKRYTRQGSRVLALGYKPLGDMMVS-----------QVRDLKREDVESDLTF 666 (1160)
T ss_pred HHHHHh--------------CchhHHHHHHHHhhccceEEEEecccccccchh-----------hhhhhhhhhhhhccee
Confidence 988653 346778889999999999999999985421100 0112357789999999
Q ss_pred EEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCC------------cc-------------
Q 004437 617 VGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNE------------DL------------- 671 (753)
Q Consensus 617 lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~------------~~------------- 671 (753)
.|++.|..|++++++++|+.|++.+++++|+|||++.||.++|+++||....- .+
T Consensus 667 aGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~ 746 (1160)
T KOG0209|consen 667 AGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPL 746 (1160)
T ss_pred eeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehheeeeeccCceeeccCccCCCceeeEecCCCceeecC
Confidence 99999999999999999999999999999999999999999999999865310 00
Q ss_pred ------------ccccccchhhhccCHHH-HHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhh
Q 004437 672 ------------TGRSFTGKEFMALSSTQ-QIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKL 738 (753)
Q Consensus 672 ------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~ 738 (753)
...+++|+.+..+...+ +..++.+ ..||||+.|.||..++..+++.|+.++|+|||.||+.|||+
T Consensus 747 ~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~h--v~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~ 824 (1160)
T KOG0209|consen 747 KPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPH--VWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQ 824 (1160)
T ss_pred CCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhh--eeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhh
Confidence 12456777777666544 4455556 78999999999999999999999999999999999999999
Q ss_pred cCceEecCCCCc
Q 004437 739 ADIGVAMGITGT 750 (753)
Q Consensus 739 A~vgiamgi~g~ 750 (753)
||||||+= |+.
T Consensus 825 AhVGVALL-~~~ 835 (1160)
T KOG0209|consen 825 AHVGVALL-NNP 835 (1160)
T ss_pred cccceehh-cCC
Confidence 99999987 554
|
|
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-73 Score=630.52 Aligned_cols=458 Identities=29% Similarity=0.449 Sum_probs=379.7
Q ss_pred cchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEe-CCeeeeeecCCCCCCCcEEEecCCCcccccEEEE
Q 004437 94 DYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVA 172 (753)
Q Consensus 94 ~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R-~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl 172 (753)
+|.++..+++++.+..+++.+...|+.+++++|.++.|+++++++ ||+ .++|+.++|++||+|.|+|||+||+||+|+
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~-~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~ 251 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGE-EEEVPVEEVQVGDIVLVRPGERIPVDGVVV 251 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCc-EEEEEHHHCCCCCEEEECCCCEecCCeEEE
Confidence 345566677777788888888888888999999999999997776 565 467999999999999999999999999999
Q ss_pred EeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCC
Q 004437 173 ALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEE 252 (753)
Q Consensus 173 ~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~ 252 (753)
+ |...||||+|||||.|+.|.+ ++.||+||.+.+|.+...|+++|.+|.++++.++++++ +.
T Consensus 252 ~---G~s~vDeS~iTGEs~PV~k~~-------------Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~A--q~ 313 (713)
T COG2217 252 S---GSSSVDESMLTGESLPVEKKP-------------GDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEA--QS 313 (713)
T ss_pred e---CcEEeecchhhCCCCCEecCC-------------CCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHH--hh
Confidence 8 888999999999999999998 88999999999999999999999999999999999998 78
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHH
Q 004437 253 SDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITT 332 (753)
Q Consensus 253 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~ 332 (753)
+++|.|+..|+++.+|++.+++++++.|++++.. . ++ .+...+..++++++++|||+|.+++|+
T Consensus 314 ~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~-~------~~---------~~~~a~~~a~avLVIaCPCALgLAtP~ 377 (713)
T COG2217 314 SKAPIQRLADRVASYFVPVVLVIAALTFALWPLF-G------GG---------DWETALYRALAVLVIACPCALGLATPT 377 (713)
T ss_pred CCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHh-c------CC---------cHHHHHHHHHhheeeeCccHHHhHHHH
Confidence 8999999999999999998888888877753211 1 11 123467889999999999999999999
Q ss_pred HHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCC
Q 004437 333 CLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWP 412 (753)
Q Consensus 333 ~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (753)
++..++.+.+++|+++|+..++|.++++|+++||||||||+|+|.|.++...+. +
T Consensus 378 ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~-----------------~-------- 432 (713)
T COG2217 378 AILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG-----------------D-------- 432 (713)
T ss_pred HHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC-----------------C--------
Confidence 999999999999999999999999999999999999999999999999875431 0
Q ss_pred CCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccc
Q 004437 413 CYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCC 492 (753)
Q Consensus 413 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (753)
+..+..++..+. ..+.||...|+++.++..|......
T Consensus 433 ----e~~~L~laAalE--------------~~S~HPiA~AIv~~a~~~~~~~~~~------------------------- 469 (713)
T COG2217 433 ----EDELLALAAALE--------------QHSEHPLAKAIVKAAAERGLPDVED------------------------- 469 (713)
T ss_pred ----HHHHHHHHHHHH--------------hcCCChHHHHHHHHHHhcCCCCccc-------------------------
Confidence 111222222222 4567999999999888766221110
Q ss_pred cccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhcc
Q 004437 493 EWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKG 572 (753)
Q Consensus 493 ~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G 572 (753)
...+| .+.....+ +| ..+.-|++..+.+.-. ..+. ..+..+.+..+|
T Consensus 470 ---------~~~i~----G~Gv~~~v---~g--~~v~vG~~~~~~~~~~----------~~~~-----~~~~~~~~~~~G 516 (713)
T COG2217 470 ---------FEEIP----GRGVEAEV---DG--ERVLVGNARLLGEEGI----------DLPL-----LSERIEALESEG 516 (713)
T ss_pred ---------eeeec----cCcEEEEE---CC--EEEEEcCHHHHhhcCC----------Cccc-----hhhhHHHHHhcC
Confidence 11111 11222222 23 3455699887754310 0110 345567788899
Q ss_pred ceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCCh
Q 004437 573 LRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNK 652 (753)
Q Consensus 573 ~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~ 652 (753)
..++.++. |.+++|+++++|++|++++++|++|++.|++++|+|||+.
T Consensus 517 ~t~v~va~--------------------------------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~ 564 (713)
T COG2217 517 KTVVFVAV--------------------------------DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNR 564 (713)
T ss_pred CeEEEEEE--------------------------------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCH
Confidence 88877775 3479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCccc
Q 004437 653 STAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVND 732 (753)
Q Consensus 653 ~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND 732 (753)
.+|..+|+++|| ..+++...|++|.++|+.||++|+.|+|+|||.||
T Consensus 565 ~~A~~iA~~lGI---------------------------------d~v~AellPedK~~~V~~l~~~g~~VamVGDGIND 611 (713)
T COG2217 565 RTAEAIAKELGI---------------------------------DEVRAELLPEDKAEIVRELQAEGRKVAMVGDGIND 611 (713)
T ss_pred HHHHHHHHHcCh---------------------------------HhheccCCcHHHHHHHHHHHhcCCEEEEEeCCchh
Confidence 999999999999 47999999999999999999999999999999999
Q ss_pred HHHhhhcCceEecCCCCccCC
Q 004437 733 APALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 733 ~~~l~~A~vgiamgi~g~~~~ 753 (753)
+|+|.+|||||||| +|+|++
T Consensus 612 APALA~AdVGiAmG-~GtDvA 631 (713)
T COG2217 612 APALAAADVGIAMG-SGTDVA 631 (713)
T ss_pred HHHHhhcCeeEeec-CCcHHH
Confidence 99999999999999 899975
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-69 Score=626.08 Aligned_cols=453 Identities=26% Similarity=0.405 Sum_probs=378.0
Q ss_pred cchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEE
Q 004437 94 DYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAA 173 (753)
Q Consensus 94 ~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~ 173 (753)
.|.++..+++++++..+++.+++.|+++.+++|.++.+++++|+|+|++ ++|++++|+|||+|.|++||+|||||+|++
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~-~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~ 283 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGER-EEVAIADLRPGDVIEVAAGGRLPADGKLLS 283 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEE-EEEEHHHCCCCCEEEECCCCEEecceEEEE
Confidence 4667777888888999999999999999999999999999999999998 579999999999999999999999999998
Q ss_pred eeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCC
Q 004437 174 LKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEES 253 (753)
Q Consensus 174 ~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~ 253 (753)
|.+.||||+|||||.|+.|.+ ++.||+||.+.+|.+.+.|+++|.+|.+|++.+.++++ +.+
T Consensus 284 ---g~~~vdes~lTGEs~Pv~k~~-------------Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a--~~~ 345 (741)
T PRK11033 284 ---PFASFDESALTGESIPVERAT-------------GEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEA--EER 345 (741)
T ss_pred ---CcEEeecccccCCCCCEecCC-------------CCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHh--hcc
Confidence 789999999999999999987 78999999999999999999999999999999999887 667
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHH
Q 004437 254 DTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTC 333 (753)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~ 333 (753)
++|+++.+++++.+++++++++++++|++++..+ ..+| ...+.+++++++++|||+|.+++|++
T Consensus 346 k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~-----~~~~-----------~~~i~~a~svlviacPcaL~latP~a 409 (741)
T PRK11033 346 RAPIERFIDRFSRIYTPAIMLVALLVILVPPLLF-----AAPW-----------QEWIYRGLTLLLIGCPCALVISTPAA 409 (741)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----cCCH-----------HHHHHHHHHHHHHhchhhhhhhhHHH
Confidence 8999999999999999999999998887642111 1112 23466789999999999999999999
Q ss_pred HHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCC
Q 004437 334 LALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPC 413 (753)
Q Consensus 334 ~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (753)
+..++.+++|+|+++|+..++|.|+++|++|||||||||+|+|+|.++...+. ++
T Consensus 410 ~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~--------------~~----------- 464 (741)
T PRK11033 410 ITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATG--------------IS----------- 464 (741)
T ss_pred HHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCC--------------CC-----------
Confidence 99999999999999999999999999999999999999999999999865321 00
Q ss_pred CCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhccccccccccccc
Q 004437 414 YNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCE 493 (753)
Q Consensus 414 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (753)
..+++..++... ....||.+.|+++++++.+..
T Consensus 465 ------~~~~l~~aa~~e-----------~~s~hPia~Ai~~~a~~~~~~------------------------------ 497 (741)
T PRK11033 465 ------ESELLALAAAVE-----------QGSTHPLAQAIVREAQVRGLA------------------------------ 497 (741)
T ss_pred ------HHHHHHHHHHHh-----------cCCCCHHHHHHHHHHHhcCCC------------------------------
Confidence 022222222111 234699999999988765432
Q ss_pred ccccccceeeeecCCCCCceEE-EEEe-cCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhc
Q 004437 494 WWTKRSKRVATLEFDRIRKSMS-VIVR-EPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSK 571 (753)
Q Consensus 494 ~~~~~~~~~~~~~F~s~~k~~s-viv~-~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 571 (753)
+||.++++.+. .-++ ..+|+. +..|+++.+.+ ++ +.+...++.+..+
T Consensus 498 -----------~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~--------------~~----~~~~~~~~~~~~~ 546 (741)
T PRK11033 498 -----------IPEAESQRALAGSGIEGQVNGER--VLICAPGKLPP--------------LA----DAFAGQINELESA 546 (741)
T ss_pred -----------CCCCcceEEEeeEEEEEEECCEE--EEEecchhhhh--------------cc----HHHHHHHHHHHhC
Confidence 23333333332 1111 112332 33488877633 11 2344456788999
Q ss_pred cceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCC
Q 004437 572 GLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDN 651 (753)
Q Consensus 572 G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~ 651 (753)
|+|++++|+ |.+++|+++|+|++|++++++|++|+++|++++|+|||+
T Consensus 547 g~~~v~va~--------------------------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~ 594 (741)
T PRK11033 547 GKTVVLVLR--------------------------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDN 594 (741)
T ss_pred CCEEEEEEE--------------------------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCC
Confidence 999999986 347999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcc
Q 004437 652 KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVN 731 (753)
Q Consensus 652 ~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~N 731 (753)
..+|..+|+++||. .+++..|++|..+|+.+++. +.|+|+|||.|
T Consensus 595 ~~~a~~ia~~lgi~----------------------------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiN 639 (741)
T PRK11033 595 PRAAAAIAGELGID----------------------------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGIN 639 (741)
T ss_pred HHHHHHHHHHcCCC----------------------------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHH
Confidence 99999999999993 46678899999999999965 68999999999
Q ss_pred cHHHhhhcCceEecCCCCccC
Q 004437 732 DAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 732 D~~~l~~A~vgiamgi~g~~~ 752 (753)
|+|||+.|||||||| +|+|+
T Consensus 640 DapAl~~A~vgia~g-~~~~~ 659 (741)
T PRK11033 640 DAPAMKAASIGIAMG-SGTDV 659 (741)
T ss_pred hHHHHHhCCeeEEec-CCCHH
Confidence 999999999999999 89875
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-67 Score=590.81 Aligned_cols=426 Identities=42% Similarity=0.622 Sum_probs=368.2
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHh--hcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEEeeCCcEE
Q 004437 103 LILVLNAIVGVWQESNAEKALEALKK--IQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180 (753)
Q Consensus 103 ~~~~i~~~~~~~~e~~~~~~~~~l~~--~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s~~~~ 180 (753)
+++++..+++.++++++++.++.+.+ ..+++++|+|+| + +.|++++|+|||+|.+++||.|||||+|++ |.+.
T Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~-~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~---g~~~ 78 (499)
T TIGR01494 4 ILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-W-KEIPASDLVPGDIVLVKSGEIVPADGVLLS---GSCF 78 (499)
T ss_pred EhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-e-EEEEHHHCCCCCEEEECCCCEeeeeEEEEE---ccEE
Confidence 34556667889999999999999988 788899999999 6 569999999999999999999999999998 7999
Q ss_pred EEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCCCChhHHH
Q 004437 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKK 260 (753)
Q Consensus 181 Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~~~~l~~~ 260 (753)
||||+|||||.|+.|.+ ++.+|+||.+.+|.+.+.|+++|.+|..+++...+..+ ...+++++++
T Consensus 79 vdes~LTGEs~pv~k~~-------------g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~--~~~k~~~~~~ 143 (499)
T TIGR01494 79 VDESNLTGESVPVLKTA-------------GDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTG--FETKTPLQPK 143 (499)
T ss_pred EEcccccCCCCCeeecc-------------CCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhc--CCCCCchHHH
Confidence 99999999999999987 67899999999999999999999999999999988765 4557889999
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHH
Q 004437 261 LDEFG-NRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTR 339 (753)
Q Consensus 261 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~ 339 (753)
.+++. .++++++++++++++++++..+.. . ..+...+.+++++++++|||+|++++++++..+..
T Consensus 144 ~~~~~~~~~~~~~~~la~~~~~~~~~~~~~----~----------~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~ 209 (499)
T TIGR01494 144 LDRLSDIIFILFVLLIALAVFLFWAIGLWD----P----------NSIFKIFLRALILLVIAIPIALPLAVTIALAVGDA 209 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcc----c----------ccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 99998 788877777777666553211100 0 01245688899999999999999999999999999
Q ss_pred HHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCCCCccHH
Q 004437 340 KMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDAN 419 (753)
Q Consensus 340 ~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (753)
+|+++|+++|+++++|+||++|++|||||||||+|+|+|.+++..+.
T Consensus 210 ~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~--------------------------------- 256 (499)
T TIGR01494 210 RLAKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG--------------------------------- 256 (499)
T ss_pred HHHHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC---------------------------------
Confidence 99999999999999999999999999999999999999999865321
Q ss_pred HHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhccccccccccccccccccc
Q 004437 420 LQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRS 499 (753)
Q Consensus 420 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (753)
.+..+||.+.|++.++++.
T Consensus 257 ----------------------~~~s~hp~~~ai~~~~~~~--------------------------------------- 275 (499)
T TIGR01494 257 ----------------------EYLSGHPDERALVKSAKWK--------------------------------------- 275 (499)
T ss_pred ----------------------CcCCCChHHHHHHHHhhhc---------------------------------------
Confidence 0234699999999877531
Q ss_pred ceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEE
Q 004437 500 KRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMA 579 (753)
Q Consensus 500 ~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A 579 (753)
.+...||++.+++|+++++..++ .|+||+++.+.+.|.. +.+...+++++|+|++++|
T Consensus 276 -~~~~~~f~~~~~~~~~~~~~~~~---~~~~G~~~~i~~~~~~------------------~~~~~~~~~~~g~~~~~~a 333 (499)
T TIGR01494 276 -ILNVFEFSSVRKRMSVIVRGPDG---TYVKGAPEFVLSRVKD------------------LEEKVKELAQSGLRVLAVA 333 (499)
T ss_pred -CcceeccCCCCceEEEEEecCCc---EEEeCCHHHHHHhhHH------------------HHHHHHHHHhCCCEEEEEE
Confidence 11356999999999999986333 4789999999998852 1223445778999999999
Q ss_pred EeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHH
Q 004437 580 YKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAIC 659 (753)
Q Consensus 580 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia 659 (753)
++. +++|++.++|++|++++++|+.|+++|++++|+|||+..+|..+|
T Consensus 334 ~~~--------------------------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia 381 (499)
T TIGR01494 334 SKE--------------------------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIA 381 (499)
T ss_pred ECC--------------------------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Confidence 742 689999999999999999999999999999999999999999999
Q ss_pred HHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhc
Q 004437 660 RQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLA 739 (753)
Q Consensus 660 ~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A 739 (753)
+++|+ +++.+|++|.++|+.+|+.|+.|+|+|||.||+|||++|
T Consensus 382 ~~lgi------------------------------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~A 425 (499)
T TIGR01494 382 KELGI------------------------------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKA 425 (499)
T ss_pred HHcCc------------------------------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhC
Confidence 99986 477899999999999999999999999999999999999
Q ss_pred CceEecC
Q 004437 740 DIGVAMG 746 (753)
Q Consensus 740 ~vgiamg 746 (753)
|||||||
T Consensus 426 dvgia~~ 432 (499)
T TIGR01494 426 DVGIAMG 432 (499)
T ss_pred CCccccc
Confidence 9999997
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-68 Score=581.33 Aligned_cols=474 Identities=25% Similarity=0.393 Sum_probs=380.6
Q ss_pred cchhhhhHHHHHHHHHHHHHHhhhHH----HHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcccccE
Q 004437 94 DYVEPLVIVLILVLNAIVGVWQESNA----EKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADM 169 (753)
Q Consensus 94 ~~~~~~~i~~~~~i~~~~~~~~e~~~----~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~ 169 (753)
.|++...+++.++. ++.|.|.++ ...+.+|-.+.+.++.++.+|+..++|+.+.|.+||+|+|.||++||+||
T Consensus 339 tfFdt~~MLi~fi~---lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG 415 (951)
T KOG0207|consen 339 TFFDTSPMLITFIT---LGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDG 415 (951)
T ss_pred hhccccHHHHHHHH---HHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCcccccc
Confidence 45555444444433 555666554 46777888888999999999963357999999999999999999999999
Q ss_pred EEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhc
Q 004437 170 RVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDAS 249 (753)
Q Consensus 170 ~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~ 249 (753)
+|++ |+++||||++|||+.|+.|++ ++.|.+||.+.+|.....++++|.+|.+++|.+++++|
T Consensus 416 ~Vv~---Gss~VDEs~iTGEs~PV~Kk~-------------gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEA- 478 (951)
T KOG0207|consen 416 VVVD---GSSEVDESLITGESMPVPKKK-------------GSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEA- 478 (951)
T ss_pred EEEe---CceeechhhccCCceecccCC-------------CCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHH-
Confidence 9998 899999999999999999998 88999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-cccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhH
Q 004437 250 LEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFL-SWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPA 328 (753)
Q Consensus 250 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~ 328 (753)
+..++|+|+.+|+++.+|+++++++++..|+++..... .......| +..+...|..++++++++|||+|.+
T Consensus 479 -Q~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~-------~~~~~~a~~~aisVlviACPCaLgL 550 (951)
T KOG0207|consen 479 -QLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSF-------FDAFSHAFQLAISVLVIACPCALGL 550 (951)
T ss_pred -HcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchh-------hHHHHHHHHhhheEEEEECchhhhc
Confidence 77899999999999999999999998887776442221 10111112 2556678889999999999999999
Q ss_pred HHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCc
Q 004437 329 VITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGI 408 (753)
Q Consensus 329 ~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (753)
+.|++...++...+++|+++|..+.+|.+.+|++++||||||||+|++.|.++......
T Consensus 551 ATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~--------------------- 609 (951)
T KOG0207|consen 551 ATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP--------------------- 609 (951)
T ss_pred CCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc---------------------
Confidence 99999999999999999999999999999999999999999999999999998765421
Q ss_pred ccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccc
Q 004437 409 VDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVR 488 (753)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (753)
-..++++.+.+-. ...+.||...|+..+++.........
T Consensus 610 ---------~~~~e~l~~v~a~-----------Es~SeHPig~AIv~yak~~~~~~~~~--------------------- 648 (951)
T KOG0207|consen 610 ---------ISLKEALALVAAM-----------ESGSEHPIGKAIVDYAKEKLVEPNPE--------------------- 648 (951)
T ss_pred ---------ccHHHHHHHHHHH-----------hcCCcCchHHHHHHHHHhcccccCcc---------------------
Confidence 0123333322211 13456999999999998766211100
Q ss_pred cccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHh
Q 004437 489 LGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEM 568 (753)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 568 (753)
..+..-.|..+.....+.+. ++. .+-|+-+.+.+. |... .+++++..++.
T Consensus 649 -----------~~~~~~~~pg~g~~~~~~~~---~~~--i~iGN~~~~~r~--------~~~~------~~~i~~~~~~~ 698 (951)
T KOG0207|consen 649 -----------GVLSFEYFPGEGIYVTVTVD---GNE--VLIGNKEWMSRN--------GCSI------PDDILDALTES 698 (951)
T ss_pred -----------ccceeecccCCCcccceEEe---eeE--EeechHHHHHhc--------CCCC------chhHHHhhhhH
Confidence 01111112222222222222 121 556888877553 2111 23466777778
Q ss_pred hhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEc
Q 004437 569 SSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVIT 648 (753)
Q Consensus 569 ~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~T 648 (753)
..+|..+..++. |.+++|++.++|++|+++..+|+.|++.|++++|+|
T Consensus 699 e~~g~tvv~v~v--------------------------------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLT 746 (951)
T KOG0207|consen 699 ERKGQTVVYVAV--------------------------------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLT 746 (951)
T ss_pred hhcCceEEEEEE--------------------------------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEc
Confidence 889999998886 457999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcC
Q 004437 649 GDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGD 728 (753)
Q Consensus 649 Gd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GD 728 (753)
||+..+|+++|+++|+ ..|++...|+||.+.|+.+|++++.|+|+||
T Consensus 747 GDn~~aA~svA~~VGi---------------------------------~~V~aev~P~~K~~~Ik~lq~~~~~VaMVGD 793 (951)
T KOG0207|consen 747 GDNDAAARSVAQQVGI---------------------------------DNVYAEVLPEQKAEKIKEIQKNGGPVAMVGD 793 (951)
T ss_pred CCCHHHHHHHHHhhCc---------------------------------ceEEeccCchhhHHHHHHHHhcCCcEEEEeC
Confidence 9999999999999997 5799999999999999999999999999999
Q ss_pred CcccHHHhhhcCceEecCCCCccCC
Q 004437 729 GVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 729 g~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
|.||+|+|.+|||||||| .|+|+|
T Consensus 794 GINDaPALA~AdVGIaig-~gs~vA 817 (951)
T KOG0207|consen 794 GINDAPALAQADVGIAIG-AGSDVA 817 (951)
T ss_pred CCCccHHHHhhccceeec-cccHHH
Confidence 999999999999999999 889875
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-67 Score=591.31 Aligned_cols=460 Identities=28% Similarity=0.400 Sum_probs=377.3
Q ss_pred cchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCC-eeeeeecCCCCCCCcEEEecCCCcccccEEEE
Q 004437 94 DYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDG-YLVPDLPAIGLVPGDIVELGVGDKVPADMRVA 172 (753)
Q Consensus 94 ~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g-~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl 172 (753)
.|.++..++++++++.+++.++++|+++.+++|.+..+.+++|+|+| ++ +++++++|+|||+|.+++||.|||||+|+
T Consensus 17 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~-~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi 95 (556)
T TIGR01525 17 LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSE-EEVPVEELQVGDIVIVRPGERIPVDGVVI 95 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeE-EEEEHHHCCCCCEEEECCCCEeccceEEE
Confidence 46778889999999999999999999999999999999999999996 87 56999999999999999999999999999
Q ss_pred EeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCC
Q 004437 173 ALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEE 252 (753)
Q Consensus 173 ~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~ 252 (753)
+ |.+.||||+|||||.|+.|.+ ++.+|+||.+.+|.++++|++||.+|.+|++.+.++++ ..
T Consensus 96 ~---g~~~vdes~lTGEs~pv~k~~-------------g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~--~~ 157 (556)
T TIGR01525 96 S---GESEVDESALTGESMPVEKKE-------------GDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEA--QS 157 (556)
T ss_pred e---cceEEeehhccCCCCCEecCC-------------cCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHH--hh
Confidence 8 789999999999999999987 78999999999999999999999999999999998776 56
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHH
Q 004437 253 SDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITT 332 (753)
Q Consensus 253 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~ 332 (753)
+++|+++.+++++.+++++++++++++|++++... .+ ..+.+++++++++|||+|++++++
T Consensus 158 ~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~-------~~------------~~~~~~~~vlv~~~P~al~l~~~~ 218 (556)
T TIGR01525 158 SKAPIQRLADRIASYYVPAVLAIALLTFVVWLALG-------AL------------GALYRALAVLVVACPCALGLATPV 218 (556)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------cc------------hHHHHHHHHHhhccccchhehhHH
Confidence 78999999999999999998888888777643110 00 356778999999999999999999
Q ss_pred HHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCC
Q 004437 333 CLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWP 412 (753)
Q Consensus 333 ~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (753)
++..++++|+++|+++|+++++|.||++|++|||||||||+|+|+|.++...+... .
T Consensus 219 ~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------------~---------- 275 (556)
T TIGR01525 219 AILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-------------I---------- 275 (556)
T ss_pred HHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-------------c----------
Confidence 99999999999999999999999999999999999999999999999987543210 0
Q ss_pred CCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccc
Q 004437 413 CYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCC 492 (753)
Q Consensus 413 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (753)
...+++..++.+. ....||.+.|+++++++.|..... .
T Consensus 276 ------~~~~~l~~a~~~e-----------~~~~hp~~~Ai~~~~~~~~~~~~~-~------------------------ 313 (556)
T TIGR01525 276 ------SEEELLALAAALE-----------QSSSHPLARAIVRYAKKRGLELPK-Q------------------------ 313 (556)
T ss_pred ------cHHHHHHHHHHHh-----------ccCCChHHHHHHHHHHhcCCCccc-c------------------------
Confidence 0122232222221 234699999999999876543210 0
Q ss_pred cccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhcc
Q 004437 493 EWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKG 572 (753)
Q Consensus 493 ~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G 572 (753)
+ ....+| .++....++ |. ..+..|+++.+ +. ++. + ...+...+..+.++|
T Consensus 314 ------~-~~~~~~----~~gi~~~~~---g~-~~~~lg~~~~~-~~-------~~~----~---~~~~~~~~~~~~~~g 363 (556)
T TIGR01525 314 ------E-DVEEVP----GKGVEATVD---GQ-EEVRIGNPRLL-EL-------AAE----P---ISASPDLLNEGESQG 363 (556)
T ss_pred ------c-CeeEec----CCeEEEEEC---Ce-eEEEEecHHHH-hh-------cCC----C---chhhHHHHHHHhhCC
Confidence 0 001111 122222221 21 23445777655 11 010 0 111234556778899
Q ss_pred ceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCC-CeEEEEcCCC
Q 004437 573 LRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAG-IEVMVITGDN 651 (753)
Q Consensus 573 ~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~g-i~v~i~TGd~ 651 (753)
+|++.++. |.+++|.+.++|+++|+++++|++|+++| ++++|+|||+
T Consensus 364 ~~~~~v~~--------------------------------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~ 411 (556)
T TIGR01525 364 KTVVFVAV--------------------------------DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDN 411 (556)
T ss_pred cEEEEEEE--------------------------------CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCC
Confidence 99998885 34799999999999999999999999999 9999999999
Q ss_pred hHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcc
Q 004437 652 KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVN 731 (753)
Q Consensus 652 ~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~N 731 (753)
..++..+++++|+ ..+|++..|++|..+++.+++.++.|+|+|||.|
T Consensus 412 ~~~a~~i~~~lgi---------------------------------~~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~n 458 (556)
T TIGR01525 412 RSAAEAVAAELGI---------------------------------DEVHAELLPEDKLAIVKELQEEGGVVAMVGDGIN 458 (556)
T ss_pred HHHHHHHHHHhCC---------------------------------CeeeccCCHHHHHHHHHHHHHcCCEEEEEECChh
Confidence 9999999999999 3688899999999999999999999999999999
Q ss_pred cHHHhhhcCceEecCCCCccC
Q 004437 732 DAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 732 D~~~l~~A~vgiamgi~g~~~ 752 (753)
|++|++.||+||+|| ++++.
T Consensus 459 D~~al~~A~vgia~g-~~~~~ 478 (556)
T TIGR01525 459 DAPALAAADVGIAMG-AGSDV 478 (556)
T ss_pred HHHHHhhCCEeEEeC-CCCHH
Confidence 999999999999999 87763
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-66 Score=579.57 Aligned_cols=443 Identities=27% Similarity=0.442 Sum_probs=364.0
Q ss_pred cchhhhh-HHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeC-CeeeeeecCCCCCCCcEEEecCCCcccccEEE
Q 004437 94 DYVEPLV-IVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRD-GYLVPDLPAIGLVPGDIVELGVGDKVPADMRV 171 (753)
Q Consensus 94 ~~~~~~~-i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~-g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~v 171 (753)
.|++... +++++.+..+++.+.++|+++.+++|.+..+++++++|+ |.+ ++|++++|+|||+|.|++||+|||||+|
T Consensus 52 ~~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~-~~v~~~~l~~GDii~v~~Ge~iP~Dg~v 130 (562)
T TIGR01511 52 TFFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSI-EEVPVALLQPGDIVKVLPGEKIPVDGTV 130 (562)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeE-EEEEHHHCCCCCEEEECCCCEecCceEE
Confidence 3555554 556666777888888889999999999999999999986 555 5699999999999999999999999999
Q ss_pred EEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccC
Q 004437 172 AALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLE 251 (753)
Q Consensus 172 l~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~ 251 (753)
++ |.+.||||+|||||.|+.|.+ ++.+|+||.+.+|.+.++|+++|.+|.+|++.+.++++ +
T Consensus 131 ~~---g~~~vdes~lTGEs~pv~k~~-------------gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a--~ 192 (562)
T TIGR01511 131 IE---GESEVDESLVTGESLPVPKKV-------------GDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQA--Q 192 (562)
T ss_pred EE---CceEEehHhhcCCCCcEEcCC-------------CCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHH--H
Confidence 98 789999999999999999987 78999999999999999999999999999999999877 6
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHH
Q 004437 252 ESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVIT 331 (753)
Q Consensus 252 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~ 331 (753)
.+++|+++.+++++.++++++++++++.++++. ..+.+++++++++|||+|++++|
T Consensus 193 ~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~~------------------------~~~~~~~svlvvacPcaL~la~p 248 (562)
T TIGR01511 193 QSKAPIQRLADKVAGYFVPVVIAIALITFVIWL------------------------FALEFAVTVLIIACPCALGLATP 248 (562)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------HHHHHHHHHHHHhccchhhhHHH
Confidence 678999999999999999998888877766521 24667899999999999999999
Q ss_pred HHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccC
Q 004437 332 TCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDW 411 (753)
Q Consensus 332 ~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (753)
+++..++.+++++|+++|++.++|.|+++|++|||||||||+|+|.+.++...+.. .
T Consensus 249 ~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~--------------~--------- 305 (562)
T TIGR01511 249 TVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR--------------D--------- 305 (562)
T ss_pred HHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC--------------C---------
Confidence 99999999999999999999999999999999999999999999999998643210 0
Q ss_pred CCCCccHHHHHHHH-HHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccc
Q 004437 412 PCYNMDANLQAMAK-ICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLG 490 (753)
Q Consensus 412 ~~~~~~~~~~~~~~-~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (753)
. .+++. +++++. ...||.+.|+++++++.+.......
T Consensus 306 -----~---~~~l~~aa~~e~------------~s~HPia~Ai~~~~~~~~~~~~~~~---------------------- 343 (562)
T TIGR01511 306 -----R---TELLALAAALEA------------GSEHPLAKAIVSYAKEKGITLVEVS---------------------- 343 (562)
T ss_pred -----H---HHHHHHHHHHhc------------cCCChHHHHHHHHHHhcCCCcCCCC----------------------
Confidence 0 12222 223332 3459999999999987654321100
Q ss_pred cccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhh
Q 004437 491 CCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSS 570 (753)
Q Consensus 491 ~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 570 (753)
....+| .+.+...+ +| ..+..|+++.+.+. +. .++ .+.+
T Consensus 344 ----------~~~~~~----g~Gi~~~~---~g--~~~~iG~~~~~~~~--------~~--~~~------------~~~~ 382 (562)
T TIGR01511 344 ----------DFKAIP----GIGVEGTV---EG--TKIQLGNEKLLGEN--------AI--KID------------GKAE 382 (562)
T ss_pred ----------CeEEEC----CceEEEEE---CC--EEEEEECHHHHHhC--------CC--CCC------------hhhh
Confidence 001111 22333333 22 23556998876432 10 011 1236
Q ss_pred ccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCC
Q 004437 571 KGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGD 650 (753)
Q Consensus 571 ~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd 650 (753)
+|.+++.++. |.+++|++.++|++||+++++|++|++.|++++|+|||
T Consensus 383 ~g~~~~~~~~--------------------------------~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd 430 (562)
T TIGR01511 383 QGSTSVLVAV--------------------------------NGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGD 430 (562)
T ss_pred CCCEEEEEEE--------------------------------CCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCC
Confidence 7888877653 56899999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCc
Q 004437 651 NKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGV 730 (753)
Q Consensus 651 ~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ 730 (753)
+...+..+++++|+. ++++..|++|.++++.+++.++.|+|+|||.
T Consensus 431 ~~~~a~~ia~~lgi~----------------------------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~ 476 (562)
T TIGR01511 431 NRKTAKAVAKELGIN----------------------------------VRAEVLPDDKAALIKELQEKGRVVAMVGDGI 476 (562)
T ss_pred CHHHHHHHHHHcCCc----------------------------------EEccCChHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 999999999999992 6777889999999999999999999999999
Q ss_pred ccHHHhhhcCceEecCCCCccC
Q 004437 731 NDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 731 ND~~~l~~A~vgiamgi~g~~~ 752 (753)
||++|++.||+||+|| +|+|+
T Consensus 477 nD~~al~~A~vgia~g-~g~~~ 497 (562)
T TIGR01511 477 NDAPALAQADVGIAIG-AGTDV 497 (562)
T ss_pred ccHHHHhhCCEEEEeC-CcCHH
Confidence 9999999999999999 88764
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-66 Score=581.21 Aligned_cols=439 Identities=28% Similarity=0.450 Sum_probs=365.7
Q ss_pred cchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEE
Q 004437 94 DYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAA 173 (753)
Q Consensus 94 ~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~ 173 (753)
.|+++..++++++++.+++.++++|+++.++++.++.+++++|+|+|++ +++++++|+|||+|.+++||+|||||+|++
T Consensus 17 ~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~-~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~ 95 (536)
T TIGR01512 17 EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSL-EEVAVEELKVGDVVVVKPGERVPVDGVVLS 95 (536)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEE-EEEEHHHCCCCCEEEEcCCCEeecceEEEe
Confidence 4788888889999999999999999999999999999999999999999 579999999999999999999999999998
Q ss_pred eeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCC
Q 004437 174 LKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEES 253 (753)
Q Consensus 174 ~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~ 253 (753)
|.+.||||+|||||.|+.|.+ ++.+|+||.+.+|.++++|++||.+|.+|++.+.++++ ...
T Consensus 96 ---g~~~vdes~lTGEs~pv~k~~-------------g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~--~~~ 157 (536)
T TIGR01512 96 ---GTSTVDESALTGESVPVEKAP-------------GDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEA--QSR 157 (536)
T ss_pred ---CcEEEEecccCCCCCcEEeCC-------------CCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHH--hhC
Confidence 789999999999999999987 78999999999999999999999999999999998776 567
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHH
Q 004437 254 DTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTC 333 (753)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~ 333 (753)
++|+++.+++++.+++++++++++++|++++.. ..| ...+.+++++++++|||+|+++++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~-----------~~~~~~~~svlv~~~P~aL~la~~~~ 219 (536)
T TIGR01512 158 KAKTQRFIDRFARYYTPVVLAIALAIWLVPGLL-------KRW-----------PFWVYRALVLLVVASPCALVISAPAA 219 (536)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccc-----------HHHHHHHHHHHhhcCccccccchHHH
Confidence 899999999999999999988888777663311 111 12567789999999999999999999
Q ss_pred HHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCC
Q 004437 334 LALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPC 413 (753)
Q Consensus 334 ~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (753)
+..++.+++++|+++|+++++|.+|++|++|||||||||+|+|+|.+++..
T Consensus 220 ~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~----------------------------- 270 (536)
T TIGR01512 220 YLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA----------------------------- 270 (536)
T ss_pred HHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH-----------------------------
Confidence 999999999999999999999999999999999999999999999987521
Q ss_pred CCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhccccccccccccc
Q 004437 414 YNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCE 493 (753)
Q Consensus 414 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (753)
+++..++.+. ....||.+.|+++++++.+ +...
T Consensus 271 --------~~l~~a~~~e-----------~~~~hp~~~Ai~~~~~~~~-~~~~--------------------------- 303 (536)
T TIGR01512 271 --------EVLRLAAAAE-----------QASSHPLARAIVDYARKRE-NVES--------------------------- 303 (536)
T ss_pred --------HHHHHHHHHh-----------ccCCCcHHHHHHHHHHhcC-CCcc---------------------------
Confidence 1222222111 2346999999999887643 1100
Q ss_pred ccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccc
Q 004437 494 WWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGL 573 (753)
Q Consensus 494 ~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~ 573 (753)
...+| .+.+...+ +|.. +..|+++.+.+.. . ..+..+|.
T Consensus 304 --------~~~~~----g~gi~~~~---~g~~--~~ig~~~~~~~~~------------~------------~~~~~~~~ 342 (536)
T TIGR01512 304 --------VEEVP----GEGVRAVV---DGGE--VRIGNPRSLEAAV------------G------------ARPESAGK 342 (536)
T ss_pred --------eEEec----CCeEEEEE---CCeE--EEEcCHHHHhhcC------------C------------cchhhCCC
Confidence 01111 12222222 2332 3358876553320 0 03455677
Q ss_pred eEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCC-eEEEEcCCCh
Q 004437 574 RCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGI-EVMVITGDNK 652 (753)
Q Consensus 574 rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi-~v~i~TGd~~ 652 (753)
+++.++ .|..++|.+.++|++|++++++|++|+++|+ +++|+|||+.
T Consensus 343 ~~~~v~--------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~ 390 (536)
T TIGR01512 343 TIVHVA--------------------------------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRR 390 (536)
T ss_pred eEEEEE--------------------------------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCH
Confidence 766554 2568999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCccc
Q 004437 653 STAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVND 732 (753)
Q Consensus 653 ~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND 732 (753)
.++..+++++|+. .+|++..|++|..+++.++..++.|+|+|||.||
T Consensus 391 ~~a~~i~~~lgi~---------------------------------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD 437 (536)
T TIGR01512 391 AVAERVARELGID---------------------------------EVHAELLPEDKLEIVKELREKYGPVAMVGDGIND 437 (536)
T ss_pred HHHHHHHHHcCCh---------------------------------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHH
Confidence 9999999999993 5788889999999999999999999999999999
Q ss_pred HHHhhhcCceEecCCCCcc
Q 004437 733 APALKLADIGVAMGITGTE 751 (753)
Q Consensus 733 ~~~l~~A~vgiamgi~g~~ 751 (753)
++|++.||+||+||.+|++
T Consensus 438 ~~al~~A~vgia~g~~~~~ 456 (536)
T TIGR01512 438 APALAAADVGIAMGASGSD 456 (536)
T ss_pred HHHHHhCCEEEEeCCCccH
Confidence 9999999999999955554
|
. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-64 Score=596.97 Aligned_cols=458 Identities=28% Similarity=0.405 Sum_probs=375.5
Q ss_pred cchh-hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEE
Q 004437 94 DYVE-PLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVA 172 (753)
Q Consensus 94 ~~~~-~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl 172 (753)
.|++ +..+++++.+..+++.+.+.|+++.+++|.++.+++++++|+|++ ++|+.++|+|||+|.|++||+|||||+|+
T Consensus 284 ~~~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~-~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~ 362 (834)
T PRK10671 284 LYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGE-KSVPLADVQPGMLLRLTTGDRVPVDGEIT 362 (834)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcE-EEEEHHHcCCCCEEEEcCCCEeeeeEEEE
Confidence 3655 455667777888888888888899999999999999999999998 56999999999999999999999999999
Q ss_pred EeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCC
Q 004437 173 ALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEE 252 (753)
Q Consensus 173 ~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~ 252 (753)
+ |.+.||||+|||||.|+.|.+ ++.+|+||.+.+|.+.+.|+++|.+|.++++.++++++ +.
T Consensus 363 ~---g~~~vdeS~lTGEs~pv~k~~-------------gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a--~~ 424 (834)
T PRK10671 363 Q---GEAWLDEAMLTGEPIPQQKGE-------------GDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQA--QS 424 (834)
T ss_pred E---ceEEEeehhhcCCCCCEecCC-------------CCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHH--hc
Confidence 8 789999999999999999988 78999999999999999999999999999999999887 56
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHH
Q 004437 253 SDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITT 332 (753)
Q Consensus 253 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~ 332 (753)
.++|+++..++++.++++++++++++.+++++.. ..+ ..+.+.+.+++++++++|||+|++++|+
T Consensus 425 ~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~-------~~~--------~~~~~~~~~a~~vlv~acPcaL~la~p~ 489 (834)
T PRK10671 425 SKPEIGQLADKISAVFVPVVVVIALVSAAIWYFF-------GPA--------PQIVYTLVIATTVLIIACPCALGLATPM 489 (834)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------CCc--------hHHHHHHHHHHHHHHHhcccchhhhHHH
Confidence 7899999999999999999888888776653211 111 1124567789999999999999999999
Q ss_pred HHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCC
Q 004437 333 CLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWP 412 (753)
Q Consensus 333 ~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (753)
++..++.+++++|+++|+.+++|.|+++|++|||||||||+|+|+|.++...+. ..
T Consensus 490 a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~--------------~~---------- 545 (834)
T PRK10671 490 SIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNG--------------VD---------- 545 (834)
T ss_pred HHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCC--------------CC----------
Confidence 999999999999999999999999999999999999999999999998764321 00
Q ss_pred CCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccc
Q 004437 413 CYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCC 492 (753)
Q Consensus 413 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 492 (753)
.. +.+..+++++. ...||.+.|++++++.......
T Consensus 546 ----~~--~~l~~a~~~e~------------~s~hp~a~Ai~~~~~~~~~~~~--------------------------- 580 (834)
T PRK10671 546 ----EA--QALRLAAALEQ------------GSSHPLARAILDKAGDMTLPQV--------------------------- 580 (834)
T ss_pred ----HH--HHHHHHHHHhC------------CCCCHHHHHHHHHHhhCCCCCc---------------------------
Confidence 01 11222333332 3469999999987753211100
Q ss_pred cccccccceeeeecCCCCC-ceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhc
Q 004437 493 EWWTKRSKRVATLEFDRIR-KSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSK 571 (753)
Q Consensus 493 ~~~~~~~~~~~~~~F~s~~-k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 571 (753)
.+|.... +.+...+ +|+ .+..|+++.+.+.. ++ .+.+.+.++.+.++
T Consensus 581 ------------~~~~~~~g~Gv~~~~---~g~--~~~~G~~~~~~~~~------------~~---~~~~~~~~~~~~~~ 628 (834)
T PRK10671 581 ------------NGFRTLRGLGVSGEA---EGH--ALLLGNQALLNEQQ------------VD---TKALEAEITAQASQ 628 (834)
T ss_pred ------------ccceEecceEEEEEE---CCE--EEEEeCHHHHHHcC------------CC---hHHHHHHHHHHHhC
Confidence 0111111 1122222 232 35569999774421 11 12345556778889
Q ss_pred cceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCC
Q 004437 572 GLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDN 651 (753)
Q Consensus 572 G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~ 651 (753)
|.+++.+|+ |..++|++.+.|++|++++++|++|++.|++++|+|||+
T Consensus 629 g~~~v~va~--------------------------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~ 676 (834)
T PRK10671 629 GATPVLLAV--------------------------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDN 676 (834)
T ss_pred CCeEEEEEE--------------------------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCC
Confidence 999999986 236899999999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcc
Q 004437 652 KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVN 731 (753)
Q Consensus 652 ~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~N 731 (753)
..++..+++++|+ ..++++..|++|.++++.++.+++.|+|+|||.|
T Consensus 677 ~~~a~~ia~~lgi---------------------------------~~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~n 723 (834)
T PRK10671 677 PTTANAIAKEAGI---------------------------------DEVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGIN 723 (834)
T ss_pred HHHHHHHHHHcCC---------------------------------CEEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHH
Confidence 9999999999999 4688999999999999999999999999999999
Q ss_pred cHHHhhhcCceEecCCCCccC
Q 004437 732 DAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 732 D~~~l~~A~vgiamgi~g~~~ 752 (753)
|++|++.||+||||| +|+|.
T Consensus 724 D~~al~~Agvgia~g-~g~~~ 743 (834)
T PRK10671 724 DAPALAQADVGIAMG-GGSDV 743 (834)
T ss_pred HHHHHHhCCeeEEec-CCCHH
Confidence 999999999999999 88874
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-58 Score=469.57 Aligned_cols=505 Identities=24% Similarity=0.337 Sum_probs=387.4
Q ss_pred hhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccchhh--hhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcc-cccEEEe
Q 004437 62 DDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEP--LVIVLILVLNAIVGVWQESNAEKALEALKKIQC-ESGKVLR 138 (753)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~-~~~~V~R 138 (753)
++|.+++.++.++++.++.++.+..+.......|... +.+++.+++..+-+.+.|-|.+.+.+.|++.+. ..+++++
T Consensus 31 kNPVMFvv~vg~~lt~~l~~~~~lfg~~~~~~~f~~~i~~~L~fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~ 110 (681)
T COG2216 31 KNPVMFVVEVGSILTTFLTIFPDLFGGTGGSRLFNLAITIILWFTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLR 110 (681)
T ss_pred hCCeEEeehHHHHHHHHHHHhhhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhc
Confidence 4677777777777776555544433222222222222 223444556666777788888888888876544 3566777
Q ss_pred C-CeeeeeecCCCCCCCcEEEecCCCcccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEee
Q 004437 139 D-GYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAG 217 (753)
Q Consensus 139 ~-g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~G 217 (753)
+ |.+ +.+++.+|+.||+|.+++||.||+||.|++ |.+.||||.+||||.||.|.+... -+-+-.|
T Consensus 111 ~~g~~-~~v~st~Lk~gdiV~V~age~IP~DGeVIe---G~asVdESAITGESaPViresGgD----------~ssVtGg 176 (681)
T COG2216 111 ADGSI-EMVPATELKKGDIVLVEAGEIIPSDGEVIE---GVASVDESAITGESAPVIRESGGD----------FSSVTGG 176 (681)
T ss_pred CCCCe-eeccccccccCCEEEEecCCCccCCCeEEe---eeeecchhhccCCCcceeeccCCC----------cccccCC
Confidence 6 666 679999999999999999999999999999 899999999999999999987321 2458999
Q ss_pred cEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCC
Q 004437 218 TTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWP 297 (753)
Q Consensus 218 t~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (753)
|++++.|++..++....+|.+.++..+++.+ +.++||.+..++-+..-++++.+++....+-+.. |. . +-+
T Consensus 177 T~v~SD~l~irita~pG~sFlDrMI~LVEgA--~R~KTPNEIAL~iLL~~LTliFL~~~~Tl~p~a~--y~---~--g~~ 247 (681)
T COG2216 177 TRVLSDWLKIRITANPGETFLDRMIALVEGA--ERQKTPNEIALTILLSGLTLIFLLAVATLYPFAI--YS---G--GGA 247 (681)
T ss_pred cEEeeeeEEEEEEcCCCccHHHHHHHHhhch--hccCChhHHHHHHHHHHHHHHHHHHHHhhhhHHH--Hc---C--CCC
Confidence 9999999999999999999999999999887 7789998877665544444433333222222211 11 0 000
Q ss_pred cccccchhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceE
Q 004437 298 ANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMS 377 (753)
Q Consensus 298 ~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~ 377 (753)
..+...+++++..+|-.+.-.++..-..++.|+.+.+++.++..++|..|.||++..|||||+|-|+-.
T Consensus 248 -----------~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~ 316 (681)
T COG2216 248 -----------ASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQ 316 (681)
T ss_pred -----------cCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchh
Confidence 123445788999999999998888888899999999999999999999999999999999999999877
Q ss_pred EEEEEEcCcccceeeeeeecCcccCCCCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHH
Q 004437 378 VTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLV 457 (753)
Q Consensus 378 v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~ 457 (753)
-.++++.+. ...++++..+.++. .+...|.-.+++.++
T Consensus 317 A~~f~p~~g-------------------------------v~~~~la~aa~lsS-----------l~DeTpEGrSIV~LA 354 (681)
T COG2216 317 ASEFIPVPG-------------------------------VSEEELADAAQLAS-----------LADETPEGRSIVELA 354 (681)
T ss_pred hhheecCCC-------------------------------CCHHHHHHHHHHhh-----------hccCCCCcccHHHHH
Confidence 777665432 11255555555543 122367888999999
Q ss_pred HHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccc-eeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHH
Q 004437 458 EKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSK-RVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESL 536 (753)
Q Consensus 458 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~i 536 (753)
+++++...... .. ....+||+.+.+++++-... + ..+-||+++.+
T Consensus 355 ~~~~~~~~~~~------------------------------~~~~~~fvpFtA~TRmSGvd~~~--~--~~irKGA~dai 400 (681)
T COG2216 355 KKLGIELREDD------------------------------LQSHAEFVPFTAQTRMSGVDLPG--G--REIRKGAVDAI 400 (681)
T ss_pred HHhccCCCccc------------------------------ccccceeeecceecccccccCCC--C--ceeecccHHHH
Confidence 99885433211 11 23568999887666665432 2 56779999999
Q ss_pred HHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEE
Q 004437 537 LERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVF 616 (753)
Q Consensus 537 l~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~ 616 (753)
..+-... .+ ..++.++...++-++.|-..|+++. |.++
T Consensus 401 ~~~v~~~---~g-------~~p~~l~~~~~~vs~~GGTPL~V~~--------------------------------~~~~ 438 (681)
T COG2216 401 RRYVRER---GG-------HIPEDLDAAVDEVSRLGGTPLVVVE--------------------------------NGRI 438 (681)
T ss_pred HHHHHhc---CC-------CCCHHHHHHHHHHHhcCCCceEEEE--------------------------------CCEE
Confidence 9885521 11 1235567778888999999998874 4579
Q ss_pred EEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhc
Q 004437 617 VGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKH 696 (753)
Q Consensus 617 lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (753)
+|++.++|.++++.++-+.+||+.|||++|+||||+.||..||++.|++
T Consensus 439 ~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD------------------------------- 487 (681)
T COG2216 439 LGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD------------------------------- 487 (681)
T ss_pred EEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch-------------------------------
Confidence 9999999999999999999999999999999999999999999999994
Q ss_pred CCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccC
Q 004437 697 GGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 697 ~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~ 752 (753)
..++..+|++|.++|+.-|..|+-|+|+|||.||+|+|.+||||+||. +|+..
T Consensus 488 --dfiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqA 540 (681)
T COG2216 488 --DFIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQA 540 (681)
T ss_pred --hhhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhc-cccHH
Confidence 578899999999999999999999999999999999999999999999 98753
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-36 Score=300.65 Aligned_cols=228 Identities=33% Similarity=0.567 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccc-cEEEeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEEeeCCcE
Q 004437 101 IVLILVLNAIVGVWQESNAEKALEALKKIQCES-GKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSL 179 (753)
Q Consensus 101 i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~-~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s~~~ 179 (753)
++++++++.+++.++++|+++.++++++..+++ ++|+|||++ +++++++|+|||||.|++||.+||||+|++ +|.+
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~-~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~--~g~~ 78 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRW-QKIPSSELVPGDIIILKAGDIVPADGILLE--SGSA 78 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEE-EEEEGGGT-TTSEEEEETTEBESSEEEEEE--SSEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEecccc-ccchHhhccceeeeecccccccccCcccee--cccc
Confidence 566777888899999999999999999888877 999999999 579999999999999999999999999987 5899
Q ss_pred EEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCCCChhHH
Q 004437 180 RVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDTPLRK 259 (753)
Q Consensus 180 ~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~~~~l~~ 259 (753)
+||||.+|||+.|+.|.+. ..+.+|++|+||.+.+|+++++|++||.+|..|++.+.+.++ +.+++++++
T Consensus 79 ~vd~s~ltGes~pv~k~~~--------~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~--~~~~~~~~~ 148 (230)
T PF00122_consen 79 YVDESALTGESEPVKKTPL--------PLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKS--ESKKSPLER 148 (230)
T ss_dssp EEECHHHHSBSSEEEESSS--------CCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTS--CSS-THHHH
T ss_pred ccccccccccccccccccc--------cccccchhhccccccccccccccceeeecccccccccccccc--cccchhhhh
Confidence 9999999999999999853 234489999999999999999999999999999999988665 456699999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHH
Q 004437 260 KLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTR 339 (753)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~~~~~ 339 (753)
.++++..++.+++++++++++++++.. .. ...+...+..++++++.+||++||+++++++..+++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----------~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~ 213 (230)
T PF00122_consen 149 KLNKIAKILIIIILAIAILVFIIWFFN----DS-----------GISFFKSFLFAISLLIVLIPCALPLALPLSLAIAAR 213 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCHTG----ST-----------TCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHhcccccchhhhccceec----cc-----------ccccccccccccceeeeecccceeehHHHHHHHHHH
Confidence 999999999988888888777553321 00 122245677889999999999999999999999999
Q ss_pred HHhccccccccchhhhh
Q 004437 340 KMAQKNAIVRKLPSVET 356 (753)
Q Consensus 340 ~l~k~~ilvk~~~~le~ 356 (753)
+|+++|+++|+++++|+
T Consensus 214 ~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 214 RLAKNGIIVKNLSALEA 230 (230)
T ss_dssp HHHHTTEEESSTTHHHH
T ss_pred HHHHCCEEEeCcccccC
Confidence 99999999999999985
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-22 Score=202.71 Aligned_cols=97 Identities=49% Similarity=0.814 Sum_probs=91.7
Q ss_pred CeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHH
Q 004437 613 DLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEA 692 (753)
Q Consensus 613 ~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (753)
++.++|.+.+.|++|++++++|+.|+++|++++|+|||+..++..+++++||..
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~-------------------------- 168 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFD-------------------------- 168 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCS--------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeecccccccccccccccccc--------------------------
Confidence 568999999999999999999999999999999999999999999999999942
Q ss_pred HHhcCCeEEEee--CchhH--HHHHHHHHHcCCeEEEEcCCcccHHHhhhcC
Q 004437 693 LSKHGGKVFSRA--EPRHK--QEIVRMLKEMGEVVAMTGDGVNDAPALKLAD 740 (753)
Q Consensus 693 ~~~~~~~v~~~~--~p~~K--~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~ 740 (753)
..++++. +|++| .++++.|+..++.|+|+|||.||++|+++||
T Consensus 169 -----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 169 -----SIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp -----EEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred -----ccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 4699999 99999 9999999977779999999999999999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.5e-15 Score=116.90 Aligned_cols=69 Identities=45% Similarity=0.733 Sum_probs=66.2
Q ss_pred cccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHH
Q 004437 8 AWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFIS 76 (753)
Q Consensus 8 ~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~ 76 (753)
||.++++++++.|+|+..+||+++|+++|+++||+|.++.++++++|+.++++|.+++++++++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 899999999999999999999999999999999999999889999999999999999999999999875
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.2e-14 Score=120.22 Aligned_cols=88 Identities=40% Similarity=0.496 Sum_probs=70.3
Q ss_pred hhccCCeeecCCCc--ceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeee
Q 004437 428 AVCNDAGVYCDGPL--FRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATL 505 (753)
Q Consensus 428 ~~c~~~~~~~~~~~--~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (753)
++||++.+..+.+. ....|+|+|.||+.++.+.|...... ..+..+++++.+
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~~~--------------------------~~~~~~~~~~~~ 54 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGIDIK--------------------------EIRSKYKIVAEI 54 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCcHH--------------------------HHHhhcceeEEE
Confidence 47999888655432 33899999999999999987543211 116788999999
Q ss_pred cCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhccc
Q 004437 506 EFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSH 542 (753)
Q Consensus 506 ~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~ 542 (753)
||+|+||||+++++ .++.+.+|+|||||.|+++|++
T Consensus 55 pF~S~rK~msvv~~-~~~~~~~~~KGA~e~il~~Ct~ 90 (91)
T PF13246_consen 55 PFDSERKRMSVVVR-NDGKYILYVKGAPEVILDRCTH 90 (91)
T ss_pred ccCcccceeEEEEe-CCCEEEEEcCCChHHHHHhcCC
Confidence 99999999999998 3335677999999999999986
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.45 E-value=3e-13 Score=114.54 Aligned_cols=100 Identities=26% Similarity=0.411 Sum_probs=92.7
Q ss_pred eEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHH
Q 004437 614 LVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEAL 693 (753)
Q Consensus 614 l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (753)
+...+.++---++-++++++|++|++. ++++++|||..-+....|+..|+..
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~--------------------------- 70 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPV--------------------------- 70 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCce---------------------------
Confidence 356778888888999999999999999 9999999999999999999999853
Q ss_pred HhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEec
Q 004437 694 SKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAM 745 (753)
Q Consensus 694 ~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 745 (753)
..+++...|+.|..+++.|+++++.|.|+|||.||.+||+.||+||..
T Consensus 71 ----~rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~t 118 (152)
T COG4087 71 ----ERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICT 118 (152)
T ss_pred ----eeeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEE
Confidence 579999999999999999999999999999999999999999999853
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.5e-11 Score=96.16 Aligned_cols=62 Identities=42% Similarity=0.575 Sum_probs=57.9
Q ss_pred HhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHh
Q 004437 19 EYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILA 80 (753)
Q Consensus 19 ~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~ 80 (753)
.|++++.+||+++|+++|+++||+|+++.++.+++|+.++++|.+|++++++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~~ 63 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALLG 63 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 57888888999999999999999999999888999999999999999999999999998763
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.00 E-value=1.3e-07 Score=101.24 Aligned_cols=213 Identities=20% Similarity=0.282 Sum_probs=140.6
Q ss_pred CChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEeccc--------cccccccccC--------
Q 004437 531 GSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDEL--------GEFSDYYSES-------- 594 (753)
Q Consensus 531 Ga~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~--------~~~~~~~~~~-------- 594 (753)
|-...+.+.|+.++++ ..+.|++...+.+.++...+-.-.| .+++||||... +.+.+.....
T Consensus 698 g~ad~~~eACTdfWdG-adi~PlSg~dkkkV~DFY~RaclsG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI~T~ 775 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWDG-ADIIPLSGRDKKKVKDFYLRACLSG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKIETA 775 (1354)
T ss_pred cHHHHHHHHhhhhcCC-ceeeecCcchHHHHHHHHHHHhhcc-cchheecccHHHHHHHHhCCceEEeccCcccchhhhh
Confidence 6678889999999863 4568999999988888777766666 58999999621 2222111000
Q ss_pred ----c------cccc--ccCCC--------cccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHH
Q 004437 595 ----H------PAHK--KLLDP--------SCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKST 654 (753)
Q Consensus 595 ----~------~~~~--~~~~~--------~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~ 654 (753)
+ ++.. ...+. ......-.+..|+|++..+-+.+.+....|+.|-++-|+.+..+-++...
T Consensus 776 celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELk 855 (1354)
T KOG4383|consen 776 CELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELK 855 (1354)
T ss_pred ccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHH
Confidence 0 0000 00010 01111224678999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCccccc----------------------------------------cccchh-------hhccCHH
Q 004437 655 AEAICRQIKLFSGNEDLTGR----------------------------------------SFTGKE-------FMALSST 687 (753)
Q Consensus 655 a~~ia~~~gi~~~~~~~~~~----------------------------------------~~~~~~-------~~~~~~~ 687 (753)
.+-+|.++||..+...-.+. .+..++ |..+..
T Consensus 856 SkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~ds- 934 (1354)
T KOG4383|consen 856 SKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDS- 934 (1354)
T ss_pred HHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCcccccccc-
Confidence 99999999997643321100 000000 000000
Q ss_pred HHHHH-------------------HHhcC-----CeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCccc--HHHhhhcCc
Q 004437 688 QQIEA-------------------LSKHG-----GKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVND--APALKLADI 741 (753)
Q Consensus 688 ~~~~~-------------------~~~~~-----~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND--~~~l~~A~v 741 (753)
...+. +...+ .-.|..++|+.--+.|+.+|++|++++++|-..|- .-.+-+||+
T Consensus 935 di~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadI 1014 (1354)
T KOG4383|consen 935 DIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADI 1014 (1354)
T ss_pred chhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccce
Confidence 00000 00000 23677889999999999999999999999998884 335678899
Q ss_pred eEecC
Q 004437 742 GVAMG 746 (753)
Q Consensus 742 giamg 746 (753)
+||+-
T Consensus 1015 SialD 1019 (1354)
T KOG4383|consen 1015 SIALD 1019 (1354)
T ss_pred eEEec
Confidence 99874
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.8e-09 Score=111.27 Aligned_cols=41 Identities=20% Similarity=0.252 Sum_probs=39.7
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
+.+.++++|+++++.|++++++|||+...+..+.+++++..
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~ 61 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG 61 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc
Confidence 89999999999999999999999999999999999999975
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=3.2e-09 Score=109.96 Aligned_cols=42 Identities=19% Similarity=0.320 Sum_probs=39.4
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
..+.+.++++|++|+++|++++++|||+...+..+++++++.
T Consensus 19 ~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 60 (270)
T PRK10513 19 HTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHME 60 (270)
T ss_pred CccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCC
Confidence 358899999999999999999999999999999999999975
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=2.4e-09 Score=110.88 Aligned_cols=42 Identities=14% Similarity=0.082 Sum_probs=39.6
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
.+.+.++++|++|+++|++++++|||+...+..+.+++|+..
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 60 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDA 60 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCC
Confidence 589999999999999999999999999999999999999863
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=3e-09 Score=107.28 Aligned_cols=126 Identities=23% Similarity=0.205 Sum_probs=83.5
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCcccccc---------ccchhhh--------------
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRS---------FTGKEFM-------------- 682 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~---------~~~~~~~-------------- 682 (753)
+.+.+.++|++|+++|++++++|||+...+..+++.+|+..+.....+.. +....+.
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 78999999999999999999999999999999999999864211000000 0000000
Q ss_pred ----------------------ccCHHHHHHHHHhcCC--e-----EEEeeCch--hHHHHHHHHHHc----CCeEEEEc
Q 004437 683 ----------------------ALSSTQQIEALSKHGG--K-----VFSRAEPR--HKQEIVRMLKEM----GEVVAMTG 727 (753)
Q Consensus 683 ----------------------~~~~~~~~~~~~~~~~--~-----v~~~~~p~--~K~~~v~~l~~~----~~~v~~~G 727 (753)
....++..+.+.+... . .+....|. .|...++.+.++ ...++++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~G 180 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAIG 180 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEEC
Confidence 0001112222222111 1 11233443 388888877665 35799999
Q ss_pred CCcccHHHhhhcCceEecCCCCccC
Q 004437 728 DGVNDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 728 Dg~ND~~~l~~A~vgiamgi~g~~~ 752 (753)
|+.||.+|++.|++|+||| ||.+.
T Consensus 181 D~~NDi~m~~~ag~~vam~-Na~~~ 204 (230)
T PRK01158 181 DSENDLEMFEVAGFGVAVA-NADEE 204 (230)
T ss_pred CchhhHHHHHhcCceEEec-CccHH
Confidence 9999999999999999999 99864
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.1e-09 Score=108.79 Aligned_cols=42 Identities=14% Similarity=0.165 Sum_probs=39.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
.+.+.+.++|++++++|++++++|||+...+..+.+++|+..
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 60 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKS 60 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence 488999999999999999999999999999999999999863
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.93 E-value=4.4e-09 Score=104.81 Aligned_cols=127 Identities=22% Similarity=0.197 Sum_probs=84.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccc-c----------c-hhhh----------
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSF-T----------G-KEFM---------- 682 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~-~----------~-~~~~---------- 682 (753)
.+.+++.++|++|+++|++++++|||+...+..+++.+++..+.....+..+ . . ..+.
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999998642111111000 0 0 0000
Q ss_pred -----------------ccCHHHHHHHHHhcCCeE-----EEeeC--chhHHHHHHHHHHc----CCeEEEEcCCcccHH
Q 004437 683 -----------------ALSSTQQIEALSKHGGKV-----FSRAE--PRHKQEIVRMLKEM----GEVVAMTGDGVNDAP 734 (753)
Q Consensus 683 -----------------~~~~~~~~~~~~~~~~~v-----~~~~~--p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~ 734 (753)
....+.....+...+..+ +...+ ...|...++.+.+. ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 000011122222221111 11222 34788888887664 346999999999999
Q ss_pred HhhhcCceEecCCCCccC
Q 004437 735 ALKLADIGVAMGITGTEV 752 (753)
Q Consensus 735 ~l~~A~vgiamgi~g~~~ 752 (753)
|++.|++|+||+ ||.+.
T Consensus 178 ml~~ag~~vam~-na~~~ 194 (215)
T TIGR01487 178 LFRVVGFKVAVA-NADDQ 194 (215)
T ss_pred HHHhCCCeEEcC-CccHH
Confidence 999999999999 98764
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.87 E-value=7.4e-09 Score=101.19 Aligned_cols=99 Identities=19% Similarity=0.208 Sum_probs=78.8
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCc---ccc-ccccchhhhccCHHHHHHHHHhcCCeE
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNED---LTG-RSFTGKEFMALSSTQQIEALSKHGGKV 700 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v 700 (753)
++.|++.+.|+.+++.| +++++||-....+..+++++|+..-... +.. ..++|. .
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~--------------------~ 126 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGY--------------------Q 126 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECe--------------------e
Confidence 58999999999999975 9999999999999999999999531110 000 011110 1
Q ss_pred EEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 701 FSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 701 ~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
. ..++.|...++.+++.+..++++|||.||++|++.||+|||+.
T Consensus 127 ~--~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ 170 (203)
T TIGR02137 127 L--RQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH 170 (203)
T ss_pred e--cCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec
Confidence 1 3477899999999888889999999999999999999999996
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.4e-08 Score=102.08 Aligned_cols=127 Identities=21% Similarity=0.228 Sum_probs=83.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccc--------------cccchhh---------
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGR--------------SFTGKEF--------- 681 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~--------------~~~~~~~--------- 681 (753)
.+.+.+.++|++++++|++++++|||+...+..+++.+|+..+.....+. .+.....
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 48899999999999999999999999999999999999964321000000 0000000
Q ss_pred --h-----------------ccCHHHHHHHHHhcCCe-------EEEeeCc--hhHHHHHHHHHHc----CCeEEEEcCC
Q 004437 682 --M-----------------ALSSTQQIEALSKHGGK-------VFSRAEP--RHKQEIVRMLKEM----GEVVAMTGDG 729 (753)
Q Consensus 682 --~-----------------~~~~~~~~~~~~~~~~~-------v~~~~~p--~~K~~~v~~l~~~----~~~v~~~GDg 729 (753)
. ....+.....+.+.... .+....| ..|...++.+.+. ...+++|||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0 00011111122221111 1222333 3688888887664 3579999999
Q ss_pred cccHHHhhhcCceEecCCCCccC
Q 004437 730 VNDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 730 ~ND~~~l~~A~vgiamgi~g~~~ 752 (753)
.||.+|++.|++|+||| ||.+.
T Consensus 175 ~NDi~m~~~ag~~vam~-Na~~~ 196 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVA-NAQPE 196 (225)
T ss_pred HhhHHHHHhcCceEEcC-ChhHH
Confidence 99999999999999999 98763
|
catalyze the same reaction as SPP. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.3e-08 Score=113.91 Aligned_cols=41 Identities=20% Similarity=0.327 Sum_probs=38.6
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
.+.+.+.++|++++++|++++++|||+...+..+.+++++.
T Consensus 325 ~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 325 QISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLA 365 (580)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcc
Confidence 58999999999999999999999999999999999998864
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.9e-08 Score=102.63 Aligned_cols=41 Identities=10% Similarity=0.071 Sum_probs=38.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
.+.+.++++|++|+++|++++++|||+...+..+++++|+.
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQ 64 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCC
Confidence 35688999999999999999999999999999999999985
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=98.80 E-value=2.1e-08 Score=102.61 Aligned_cols=42 Identities=14% Similarity=0.265 Sum_probs=39.6
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
..+.+++.++|++|+++|++++++|||+...+..+.+++++.
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID 55 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch
Confidence 447899999999999999999999999999999999999986
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.7e-08 Score=97.70 Aligned_cols=103 Identities=22% Similarity=0.305 Sum_probs=80.3
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccc---cccccchhhhccCHHHHHHHHHhcCCeE
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLT---GRSFTGKEFMALSSTQQIEALSKHGGKV 700 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v 700 (753)
.++++++.+.++.++++|++|+++||-...-+..+|+.+|++....... ...++| .+
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG--------------------~v 135 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTG--------------------RV 135 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEec--------------------ee
Confidence 7899999999999999999999999999999999999999975322110 001222 34
Q ss_pred EEee-CchhHHHHHHHHHHc-CC---eEEEEcCCcccHHHhhhcCceEecC
Q 004437 701 FSRA-EPRHKQEIVRMLKEM-GE---VVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 701 ~~~~-~p~~K~~~v~~l~~~-~~---~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
.... ..+.|...++.+.+. |. .+.++|||.||.|||+.|+.++|..
T Consensus 136 ~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n 186 (212)
T COG0560 136 VGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVN 186 (212)
T ss_pred eeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeC
Confidence 4433 346788888666553 44 5999999999999999999999886
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.77 E-value=6e-08 Score=99.39 Aligned_cols=41 Identities=17% Similarity=0.280 Sum_probs=37.3
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
..+.+.++|++|+++|++++++|||+...+..+.+++|+..
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~ 57 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLED 57 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCC
Confidence 44579999999999999999999999999999999999853
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.71 E-value=7.4e-08 Score=99.87 Aligned_cols=42 Identities=19% Similarity=0.279 Sum_probs=39.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
.+.+.++++|++++++|++++++|||+...+..+++++++..
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 61 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDT 61 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCC
Confidence 488999999999999999999999999999999999999863
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.71 E-value=1.4e-07 Score=97.63 Aligned_cols=43 Identities=16% Similarity=0.213 Sum_probs=39.5
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
..+.+++.++|++|+++|++++++|||+...+..+++++|+..
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~ 62 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLED 62 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence 4577889999999999999999999999999999999999864
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=4.5e-08 Score=102.33 Aligned_cols=106 Identities=20% Similarity=0.311 Sum_probs=77.4
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCc---cccccccchhhhccCHHHHHHHHHhcCCeEE
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNED---LTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 701 (753)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+...... +....++|.... .
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g----------------~-- 242 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLG----------------D-- 242 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecC----------------c--
Confidence 4889999999999999999999999998888899999998531100 000001111000 0
Q ss_pred EeeCchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 702 SRAEPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 702 ~~~~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
-+..+.|...++.+.++ .+.++|+|||.||++|++.||+|||| ||.+
T Consensus 243 -iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp 293 (322)
T PRK11133 243 -IVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKP 293 (322)
T ss_pred -cCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCH
Confidence 01345788888877654 36899999999999999999999999 5554
|
|
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.9e-08 Score=93.44 Aligned_cols=87 Identities=16% Similarity=0.243 Sum_probs=68.4
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCc--hhH
Q 004437 632 KAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEP--RHK 709 (753)
Q Consensus 632 ~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p--~~K 709 (753)
.+|+.|+++|+++.++|+.+...+..+.+.+|+. ..|....| +.-
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~---------------------------------~~f~~~kpkp~~~ 87 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIK---------------------------------RFHEGIKKKTEPY 87 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCc---------------------------------EEEecCCCCHHHH
Confidence 6899999999999999999999999999999994 23332222 223
Q ss_pred HHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccC
Q 004437 710 QEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 710 ~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~ 752 (753)
..+++.++-....+++|||+.||.+|++.|++++||+ ||.+.
T Consensus 88 ~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~ 129 (169)
T TIGR02726 88 AQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVAD 129 (169)
T ss_pred HHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHH
Confidence 3333444333467999999999999999999999999 88653
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.3e-07 Score=88.44 Aligned_cols=95 Identities=24% Similarity=0.332 Sum_probs=71.7
Q ss_pred EEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHH
Q 004437 615 VFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALS 694 (753)
Q Consensus 615 ~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (753)
+.++.+.+.|.. +|++|++.|+++.++|+++...+..+++.+|+..
T Consensus 24 ~~~~~~~~~~~~------~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~---------------------------- 69 (154)
T TIGR01670 24 EEIKAFNVRDGY------GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH---------------------------- 69 (154)
T ss_pred cEEEEEechhHH------HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE----------------------------
Confidence 345554444432 9999999999999999999999999999999842
Q ss_pred hcCCeEEEeeCchhHHHHHHHHHH----cCCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 695 KHGGKVFSRAEPRHKQEIVRMLKE----MGEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 695 ~~~~~v~~~~~p~~K~~~v~~l~~----~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
.+... ..|...++.+.+ ..+.++|+||+.||.+|++.|+++++|. ++.+
T Consensus 70 -----~~~~~--~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~ 122 (154)
T TIGR01670 70 -----LYQGQ--SNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHP 122 (154)
T ss_pred -----EEecc--cchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCH
Confidence 22221 234444444433 3467999999999999999999999998 7754
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.56 E-value=3.2e-07 Score=94.09 Aligned_cols=41 Identities=22% Similarity=0.310 Sum_probs=38.8
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
.+.+++.++|++|+++|++++++|||+...+..+.+++|+.
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLD 56 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 58899999999999999999999999999999999999986
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.50 E-value=5.7e-07 Score=89.77 Aligned_cols=44 Identities=9% Similarity=0.255 Sum_probs=39.4
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
.+...+++.++|++|+++|++++++|||+...+..+++++|+..
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~ 56 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEP 56 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 45566789999999999999999999999999999999999853
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.46 E-value=3.4e-07 Score=84.06 Aligned_cols=108 Identities=21% Similarity=0.349 Sum_probs=76.9
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccc--cchhhhccCHHHHHHHHHhcCCeEEE
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSF--TGKEFMALSSTQQIEALSKHGGKVFS 702 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~ 702 (753)
.+.+++++.+..|++.|.+|.++||--..-+.++|.++||+....+.....+ .|+-.. ... ....
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~g-fd~-----------~~pt- 154 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLG-FDT-----------NEPT- 154 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccc-ccc-----------CCcc-
Confidence 4679999999999999999999999999999999999999763332211111 011000 000 0001
Q ss_pred eeCchhHHHHHHHHHHc--CCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 703 RAEPRHKQEIVRMLKEM--GEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 703 ~~~p~~K~~~v~~l~~~--~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
.....|.+.++.+++. -..++|+|||.||.+|+..|+.=++.|
T Consensus 155 -sdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 155 -SDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred -ccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 1234688999988875 457999999999999999988766555
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=5.6e-07 Score=86.80 Aligned_cols=84 Identities=25% Similarity=0.313 Sum_probs=67.1
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHH
Q 004437 632 KAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQE 711 (753)
Q Consensus 632 ~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 711 (753)
.+|+.|+++|+++.++||++...+..+++++|+. .+|. ..+.|..
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~---------------------------------~~f~--g~~~k~~ 99 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGIT---------------------------------HLYQ--GQSNKLI 99 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCc---------------------------------eeec--CCCcHHH
Confidence 6999999999999999999999999999999983 2332 1234555
Q ss_pred HHHHHHH-c---CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 712 IVRMLKE-M---GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 712 ~v~~l~~-~---~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
.++.+.+ . ...|+|+||+.||++|++.|+++++++ ++.+
T Consensus 100 ~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~ 142 (183)
T PRK09484 100 AFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHP 142 (183)
T ss_pred HHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhH
Confidence 5554433 2 357999999999999999999999998 6643
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.41 E-value=2.4e-06 Score=85.55 Aligned_cols=40 Identities=18% Similarity=0.201 Sum_probs=36.7
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
..+.++++|++|+++|++++++|||+...+..+++.+|+.
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLT 56 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 3445899999999999999999999999999999999986
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.34 E-value=3.3e-06 Score=83.09 Aligned_cols=106 Identities=19% Similarity=0.231 Sum_probs=75.9
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++++++.+.++.|+++|+++.++|+.....+..+++.+|+..- + ...+...+.... . ...+...
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~---~-~~~~~~~~~g~~----------~--p~~~~~~ 143 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYV---Y-SNELVFDEKGFI----------Q--PDGIVRV 143 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeE---E-EEEEEEcCCCeE----------e--cceeeEE
Confidence 5899999999999999999999999999999999999997421 0 001000000000 0 0112223
Q ss_pred CchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 705 EPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
.|..|...++.+.+. .+.++++||+.||++|++.||+++|++
T Consensus 144 ~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~ 189 (201)
T TIGR01491 144 TFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLG 189 (201)
T ss_pred ccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC
Confidence 456677777666543 346999999999999999999999997
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.32 E-value=8.5e-07 Score=78.84 Aligned_cols=84 Identities=23% Similarity=0.330 Sum_probs=70.5
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHH
Q 004437 632 KAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQE 711 (753)
Q Consensus 632 ~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 711 (753)
-.|+.+.++||++.++|||+...+..=|+++||. .+|-. -.+|..
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~---------------------------------~~~qG--~~dK~~ 86 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK---------------------------------HLYQG--ISDKLA 86 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc---------------------------------eeeec--hHhHHH
Confidence 5789999999999999999999999999999993 34433 356777
Q ss_pred HHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 712 IVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 712 ~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
..+.|.++ -+.|+++||-.||.|+|+..++++|.. +|.+
T Consensus 87 a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~ 129 (170)
T COG1778 87 AFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHP 129 (170)
T ss_pred HHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCH
Confidence 77766654 457999999999999999999999998 7653
|
|
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.28 E-value=2.7e-06 Score=84.97 Aligned_cols=104 Identities=24% Similarity=0.328 Sum_probs=73.0
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccch-hhhccCHHHHHHHHHhcCCeEEEe
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGK-EFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
++++++.+.++.|++.|+++.++|+.....+..+++.+|+..-.. ......+ .+. ..+...
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~---~~~~~~~~~~~---------------~~~~~~ 146 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFA---NRLEVEDGKLT---------------GLVEGP 146 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEe---eEEEEECCEEE---------------EEecCc
Confidence 589999999999999999999999999999999999999853110 0000000 000 000111
Q ss_pred -eCchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 704 -AEPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 704 -~~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
..+..|..+++.+.++ ...++++||+.+|++|++.||++++++
T Consensus 147 ~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~ 194 (219)
T TIGR00338 147 IVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN 194 (219)
T ss_pred ccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC
Confidence 1123366666655444 246999999999999999999999986
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=3.1e-06 Score=83.58 Aligned_cols=101 Identities=24% Similarity=0.290 Sum_probs=76.9
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEE--
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS-- 702 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-- 702 (753)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+...-.. ......+ ..+..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~--~~~~~~~------------------~~i~~~~ 126 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCH--SLEVDED------------------GMITGYD 126 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcc--eEEECCC------------------CeEECcc
Confidence 3579999999999999 99999999999999999999998521100 0000000 00111
Q ss_pred eeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 703 RAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 703 ~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
-..|+.|...++.++..+..++|+|||.||.+|.+.|++|++.+
T Consensus 127 ~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~ 170 (205)
T PRK13582 127 LRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFR 170 (205)
T ss_pred ccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEEC
Confidence 12467888888988888899999999999999999999999876
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=98.25 E-value=5.4e-06 Score=82.38 Aligned_cols=112 Identities=19% Similarity=0.096 Sum_probs=76.8
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEE--
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF-- 701 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-- 701 (753)
-+++|++.+.++.|++.|+++.++||.....+..+++.++.... .......+.+..+... ......+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~-i~~n~~~~~~~~~~~~----------~p~~~~~~~ 137 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDR-IYCNEADFSNEYIHID----------WPHPCDGTC 137 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCccc-EEeceeEeeCCeeEEe----------CCCCCcccc
Confidence 46999999999999999999999999999888888887744211 0000111222211100 0000010
Q ss_pred EeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 702 SRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 702 ~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
.......|..+++.++...+.++|+|||.||..|++.||+.+|=+
T Consensus 138 ~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 138 QNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred ccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 011134689999998888888999999999999999999988743
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=9.2e-06 Score=90.90 Aligned_cols=40 Identities=3% Similarity=0.033 Sum_probs=37.1
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
..+.+.++|++|+++|++++++|||....+..+++++|+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIK 473 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCC
Confidence 5568899999999999999999999999999999999974
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.21 E-value=5.7e-06 Score=84.38 Aligned_cols=128 Identities=20% Similarity=0.267 Sum_probs=83.4
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCcc--ccc-cc-cc------------------hh
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDL--TGR-SF-TG------------------KE 680 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~--~~~-~~-~~------------------~~ 680 (753)
..+..+.+.++++++++.|+.++++|||+...++.+.+++++..+.-.+ .+. ++ .+ +.
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 3457799999999999999999999999999999999999976542100 000 00 00 00
Q ss_pred h-------hc-----------------cCHHH-------HHHHHHhcCCeE---EE-----eeCc--hhHHHHHHHHHHc
Q 004437 681 F-------MA-----------------LSSTQ-------QIEALSKHGGKV---FS-----RAEP--RHKQEIVRMLKEM 719 (753)
Q Consensus 681 ~-------~~-----------------~~~~~-------~~~~~~~~~~~v---~~-----~~~p--~~K~~~v~~l~~~ 719 (753)
+ .. ...+. +.+.+...+..+ .+ ...| ..|...++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0 00 00011 111121111111 11 2333 4688888888765
Q ss_pred ----CCeEEEEcCCcccHHHhhh-cCceEecCCCCcc
Q 004437 720 ----GEVVAMTGDGVNDAPALKL-ADIGVAMGITGTE 751 (753)
Q Consensus 720 ----~~~v~~~GDg~ND~~~l~~-A~vgiamgi~g~~ 751 (753)
...|+++||+.||++|++. ++.||||+ ||.+
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~ 214 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQE 214 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHH
Confidence 4689999999999999998 67999999 9875
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=98.20 E-value=4.2e-06 Score=81.68 Aligned_cols=92 Identities=25% Similarity=0.389 Sum_probs=68.9
Q ss_pred chhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCch
Q 004437 628 GGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPR 707 (753)
Q Consensus 628 ~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~ 707 (753)
+++.+.|+.++++|++++|+||.....+.++++.+|+...... +..+..-. +.....+.++.
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~-------~~~~~~~~-----------~~~~~~~~~~~ 153 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVI-------GNELFDNG-----------GGIFTGRITGS 153 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEE-------EEEEECTT-----------CCEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEE-------EEeeeecc-----------cceeeeeECCC
Confidence 7888999999999999999999999999999999999642110 00000000 02344555554
Q ss_pred -h--HHHHHHHH------HHcCCeEEEEcCCcccHHHhh
Q 004437 708 -H--KQEIVRML------KEMGEVVAMTGDGVNDAPALK 737 (753)
Q Consensus 708 -~--K~~~v~~l------~~~~~~v~~~GDg~ND~~~l~ 737 (753)
+ |...++.+ +.....++++|||.||++|||
T Consensus 154 ~~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 154 NCGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp EESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CCCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 4 99999999 344789999999999999996
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.18 E-value=1.6e-05 Score=80.00 Aligned_cols=44 Identities=18% Similarity=0.320 Sum_probs=39.8
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
++...+.++++|++|+++||.|+++||+.......+.+++|+..
T Consensus 16 ~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 16 EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 34467889999999999999999999999999999999999864
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.15 E-value=1.4e-05 Score=81.88 Aligned_cols=127 Identities=14% Similarity=0.235 Sum_probs=78.9
Q ss_pred CCCchhHHHHHHHHh-CCCeEEEEcCCChHHHHHHHHHcCCC--CC-CCcc---cc----cccc----------------
Q 004437 625 PPRGGVDKAIDDCRG-AGIEVMVITGDNKSTAEAICRQIKLF--SG-NEDL---TG----RSFT---------------- 677 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~-~gi~v~i~TGd~~~~a~~ia~~~gi~--~~-~~~~---~~----~~~~---------------- 677 (753)
.+.+++.++|++|++ .|++++++|||+...+..+++.+++. .. +..+ .+ ..+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 466899999999998 79999999999999998888777642 10 0000 00 0000
Q ss_pred ---chhh-----------hccC--HHHH---HHHHH-hcC-Ce-----EEEeeCc--hhHHHHHHHHHHc----CCeEEE
Q 004437 678 ---GKEF-----------MALS--STQQ---IEALS-KHG-GK-----VFSRAEP--RHKQEIVRMLKEM----GEVVAM 725 (753)
Q Consensus 678 ---~~~~-----------~~~~--~~~~---~~~~~-~~~-~~-----v~~~~~p--~~K~~~v~~l~~~----~~~v~~ 725 (753)
|..+ .... .+.. .+.+. ... .. -+....| .+|...++.+.+. ...+++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~ 195 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF 195 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 0000 0011 1111 11111 111 11 1222333 3788888877655 367999
Q ss_pred EcCCcccHHHhhhc----CceEecCCCCccC
Q 004437 726 TGDGVNDAPALKLA----DIGVAMGITGTEV 752 (753)
Q Consensus 726 ~GDg~ND~~~l~~A----~vgiamgi~g~~~ 752 (753)
+||+.||.+||+.+ +.||+|| ++.+-
T Consensus 196 ~GD~~nD~~mf~~~~~~~g~~vavg-~a~~~ 225 (266)
T PRK10187 196 VGDDLTDEAGFAVVNRLGGISVKVG-TGATQ 225 (266)
T ss_pred EcCCccHHHHHHHHHhcCCeEEEEC-CCCCc
Confidence 99999999999999 9999999 87653
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=98.14 E-value=7e-06 Score=80.87 Aligned_cols=105 Identities=13% Similarity=0.111 Sum_probs=76.1
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCc-c---ccccccchhhhccCHHHHHHHHHhcCC
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNED-L---TGRSFTGKEFMALSSTQQIEALSKHGG 698 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (753)
...+++++.+.++.+++.|++++++|+.....+..+++.+|+..--.. + ....++|...
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~----------------- 147 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNID----------------- 147 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCcc-----------------
Confidence 456899999999999999999999999999999999999998531100 0 0001111100
Q ss_pred eEEEeeCchhHHHHHHHHHHc-C---CeEEEEcCCcccHHHhhhcCceEecC
Q 004437 699 KVFSRAEPRHKQEIVRMLKEM-G---EVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 699 ~v~~~~~p~~K~~~v~~l~~~-~---~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
--....+.|...++.+.+. + +.++++||+.+|.+|++.|+.++++.
T Consensus 148 --~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 148 --GNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred --CCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 0012346787777665443 3 36899999999999999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=98.13 E-value=6.6e-06 Score=79.11 Aligned_cols=96 Identities=26% Similarity=0.348 Sum_probs=68.8
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCc-c---ccccccchhhhccCHHHHHHHHHhcCCeEE
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNED-L---TGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 701 (753)
+++++.+.++.+++.|++++++||.....+..+++.+|+..-... + ....++|... ..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~----------------~~-- 135 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIE----------------GQ-- 135 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccC----------------Cc--
Confidence 579999999999999999999999999999999999998531100 0 0000111000 00
Q ss_pred EeeCchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhc
Q 004437 702 SRAEPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLA 739 (753)
Q Consensus 702 ~~~~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A 739 (753)
....+..|...++.+.+. ...++++|||.||.+|++.|
T Consensus 136 ~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 136 VNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred ccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 123457799888887654 35799999999999999876
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.13 E-value=1.3e-05 Score=87.20 Aligned_cols=126 Identities=18% Similarity=0.178 Sum_probs=79.8
Q ss_pred CCCchhHHHH-HHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCcc--cc-cccc-------------------ch--
Q 004437 625 PPRGGVDKAI-DDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDL--TG-RSFT-------------------GK-- 679 (753)
Q Consensus 625 ~~r~~~~~~i-~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~--~~-~~~~-------------------~~-- 679 (753)
.+.+....++ +++.+.|+.++++|||.+..+..+.++.++..+...+ .+ .+.. ..
T Consensus 28 ~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 28 NLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIV 107 (413)
T ss_pred chhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhH
Confidence 3444455666 8899999999999999999999999999987653100 00 0000 00
Q ss_pred -----hh-----h------------ccCHH---H----HHHHHHhcC--Ce------EEEeeCch--hHHHHHHHHHHc-
Q 004437 680 -----EF-----M------------ALSST---Q----QIEALSKHG--GK------VFSRAEPR--HKQEIVRMLKEM- 719 (753)
Q Consensus 680 -----~~-----~------------~~~~~---~----~~~~~~~~~--~~------v~~~~~p~--~K~~~v~~l~~~- 719 (753)
.+ . ....+ . +.+.+.+.+ .. .+....|. .|...++.|.++
T Consensus 108 ~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~ 187 (413)
T PLN02382 108 VEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKL 187 (413)
T ss_pred HHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHh
Confidence 00 0 00010 1 111111111 11 12244554 599888888665
Q ss_pred ------CCeEEEEcCCcccHHHhhhcC-ceEecCCCCcc
Q 004437 720 ------GEVVAMTGDGVNDAPALKLAD-IGVAMGITGTE 751 (753)
Q Consensus 720 ------~~~v~~~GDg~ND~~~l~~A~-vgiamgi~g~~ 751 (753)
...++++||+.||++||+.|+ .||||| ||.+
T Consensus 188 ~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~ 225 (413)
T PLN02382 188 KAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQE 225 (413)
T ss_pred hhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcH
Confidence 347999999999999999999 699999 9876
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.09 E-value=1.4e-05 Score=79.68 Aligned_cols=109 Identities=17% Similarity=0.164 Sum_probs=73.9
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEE--E
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF--S 702 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~ 702 (753)
+++|++.+.++.|++.|+++.++|+-....+..+.+.+ +...........++++.+... +...... .
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~----------kp~p~~~~~~ 142 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITIT----------WPHPCDEHCQ 142 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEe----------ccCCcccccc
Confidence 68999999999999999999999999999999999887 633110000111222211100 0000000 0
Q ss_pred eeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEe
Q 004437 703 RAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA 744 (753)
Q Consensus 703 ~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 744 (753)
......|..+++.++.....++++|||.||+.|.+.||+.+|
T Consensus 143 ~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 143 NHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred ccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 001134888888888777889999999999999999999776
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.4e-05 Score=77.54 Aligned_cols=113 Identities=19% Similarity=0.165 Sum_probs=75.8
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHH-HHHhcCCeEEE
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIE-ALSKHGGKVFS 702 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~ 702 (753)
-++.+++.+.++.|++.|+++.++|+.....+..+.+..|+...-. .+++.+.... .. .... ...+| ..+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----~i~~~~~~~~-~~-g~~~~~~~~~--~~~~ 142 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFI----EIYSNPASFD-ND-GRHIVWPHHC--HGCC 142 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhee----EEeccCceEC-CC-CcEEEecCCC--CccC
Confidence 4788999999999999999999999999999999999998853211 1111110000 00 0000 00000 0000
Q ss_pred e-eCchhHHHHHHHHHHc-CCeEEEEcCCcccHHHhhhcCceEe
Q 004437 703 R-AEPRHKQEIVRMLKEM-GEVVAMTGDGVNDAPALKLADIGVA 744 (753)
Q Consensus 703 ~-~~p~~K~~~v~~l~~~-~~~v~~~GDg~ND~~~l~~A~vgia 744 (753)
. .....|..+++.+++. ...++++|||.||+.|.+.||+-+|
T Consensus 143 ~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 143 SCPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred cCCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 1 1123588999998887 8899999999999999999988765
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.07 E-value=1e-05 Score=81.78 Aligned_cols=43 Identities=30% Similarity=0.417 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHc-C---CeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 708 HKQEIVRMLKEM-G---EVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 708 ~K~~~v~~l~~~-~---~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
.|...++.+.++ | ..++++||+.||.+||+.|++||+|| |+.+
T Consensus 159 ~K~~al~~l~~~~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~ 205 (236)
T TIGR02471 159 SKGLALRYLSYRWGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDP 205 (236)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcH
Confidence 688888888765 3 36999999999999999999999999 8865
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.93 E-value=3.4e-05 Score=70.22 Aligned_cols=118 Identities=19% Similarity=0.210 Sum_probs=74.4
Q ss_pred cccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeE
Q 004437 621 GLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKV 700 (753)
Q Consensus 621 ~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 700 (753)
....++.+++.+.+++|++.|++++++||+....+...++.+|+...... ++............ ..........
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~----i~~~~~~~~~~~~~--~~~~~~~~~~ 93 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDP----VITSNGAAIYYPKE--GLFLGGGPFD 93 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhh----eeccchhhhhcccc--cccccccccc
Confidence 45568999999999999999999999999999999999999988432111 11000000000000 0000000122
Q ss_pred EEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcC-ceEe
Q 004437 701 FSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLAD-IGVA 744 (753)
Q Consensus 701 ~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~-vgia 744 (753)
..+-.++.+..+.+.+......++++||+.+|+.|++.++ -+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 94 IGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred cCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 2233444555566665555678999999999999999954 4553
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=97.92 E-value=5.7e-05 Score=75.71 Aligned_cols=104 Identities=21% Similarity=0.329 Sum_probs=70.4
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe-
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 703 (753)
++.|++.+.++.|++.|+++.++||.....+..+++.+|+.... .....+...+. ..+...
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~-~~~~~~~~~~~-----------------g~~~g~~ 145 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPEN-IFANQILFGDS-----------------GEYAGFD 145 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhh-EEEeEEEEcCC-----------------CcEECcc
Confidence 37899999999999999999999999999999999999995210 00000000000 001110
Q ss_pred -----eCchhHHHHHHHHHHc--CCeEEEEcCCcccHHHhhh--cCceEecC
Q 004437 704 -----AEPRHKQEIVRMLKEM--GEVVAMTGDGVNDAPALKL--ADIGVAMG 746 (753)
Q Consensus 704 -----~~p~~K~~~v~~l~~~--~~~v~~~GDg~ND~~~l~~--A~vgiamg 746 (753)
.....|...++.+.+. ...++++||+.||+.|.+. ++++++.|
T Consensus 146 ~~~~~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~ 197 (224)
T PLN02954 146 ENEPTSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYG 197 (224)
T ss_pred CCCcccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecC
Confidence 0123477777766654 3579999999999999887 45556555
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=97.89 E-value=7.2e-05 Score=76.04 Aligned_cols=45 Identities=22% Similarity=0.229 Sum_probs=37.8
Q ss_pred hhHHHHHHHHHHcCCeEEEEcC----CcccHHHhhhc-CceEecCCCCccC
Q 004437 707 RHKQEIVRMLKEMGEVVAMTGD----GVNDAPALKLA-DIGVAMGITGTEV 752 (753)
Q Consensus 707 ~~K~~~v~~l~~~~~~v~~~GD----g~ND~~~l~~A-~vgiamgi~g~~~ 752 (753)
-+|...++.|.++.+.|++||| |.||.+||+.| -.|++++ |+.|-
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~ 236 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDT 236 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHH
Confidence 3699999999888889999999 99999999976 4667777 87653
|
|
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00019 Score=70.73 Aligned_cols=39 Identities=21% Similarity=0.370 Sum_probs=35.9
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIK 663 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~g 663 (753)
++.+++.++|++|++.|++++++|||....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 478999999999999999999999999999999988754
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00026 Score=70.58 Aligned_cols=96 Identities=21% Similarity=0.280 Sum_probs=73.9
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEE
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS 702 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 702 (753)
...+-+++++++..|+++|++..++|+++...+..+.+..|+...-. .+++
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~-----------------------------~i~g 137 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFD-----------------------------VIVG 137 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccc-----------------------------eEEc
Confidence 55688999999999999999999999999999999999999965321 2222
Q ss_pred -ee------CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcC---ceEecCC
Q 004437 703 -RA------EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLAD---IGVAMGI 747 (753)
Q Consensus 703 -~~------~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~---vgiamgi 747 (753)
+. .|.....+++.+....+.++||||..+|+.|=+.|+ |||..|.
T Consensus 138 ~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~ 192 (220)
T COG0546 138 GDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGY 192 (220)
T ss_pred CCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCC
Confidence 22 233334444444444347999999999999999998 7788874
|
|
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0002 Score=71.83 Aligned_cols=98 Identities=17% Similarity=0.191 Sum_probs=69.4
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
.++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-. .++.++. +..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----~~~~~~~--------------------~~~ 147 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFS----VVIGGDS--------------------LPN 147 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCcc----EEEcCCC--------------------CCC
Confidence 4578999999999999999999999999999999999999853211 1111110 001
Q ss_pred eCc--hhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc-eEec
Q 004437 704 AEP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI-GVAM 745 (753)
Q Consensus 704 ~~p--~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v-giam 745 (753)
..| +--..+++.++.....++++||+.+|+.|.+.||+ +|.+
T Consensus 148 ~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v 192 (226)
T PRK13222 148 KKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGV 192 (226)
T ss_pred CCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEE
Confidence 122 22234445554446789999999999999999998 4444
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00028 Score=78.00 Aligned_cols=94 Identities=18% Similarity=0.245 Sum_probs=70.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
|+++++.+.+++++++|++++++|+.+...+..+++.+|+.. .++.++. ..+.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd-------~Vigsd~--------------------~~~~ 124 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFD-------GVFASDG--------------------TTNL 124 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC-------EEEeCCC--------------------cccc
Confidence 478999999999999999999999999999999999999721 1111110 0123
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
.|+.|...+...... +.+.++||+.+|.+|++.|+-.++++
T Consensus 125 kg~~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn 165 (479)
T PRK08238 125 KGAAKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVG 165 (479)
T ss_pred CCchHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEEC
Confidence 455665544422221 23678899999999999999999987
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00066 Score=67.20 Aligned_cols=105 Identities=14% Similarity=0.123 Sum_probs=73.4
Q ss_pred CCCchhHHHH-HHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEE-
Q 004437 625 PPRGGVDKAI-DDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS- 702 (753)
Q Consensus 625 ~~r~~~~~~i-~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~- 702 (753)
.+.|++.+.| +.+++.|++++++|+-...-+..+++.+|+......+ +.++.. ..+..+..
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~~~i------~t~l~~-----------~~tg~~~g~ 157 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRVNLI------ASQMQR-----------RYGGWVLTL 157 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccCceE------EEEEEE-----------EEccEECCc
Confidence 4589999999 5788899999999999999999999999963211111 111110 00011111
Q ss_pred eeCchhHHHHHHHH-HHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 703 RAEPRHKQEIVRML-KEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 703 ~~~p~~K~~~v~~l-~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
.+..+.|..-++.. ........+-||+.||.|||+.|+-.++++
T Consensus 158 ~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 158 RCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred cCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 24557788766644 334456679999999999999999999886
|
|
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00082 Score=66.27 Aligned_cols=106 Identities=12% Similarity=0.074 Sum_probs=72.9
Q ss_pred CCCchhHHHHH-HHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 625 PPRGGVDKAID-DCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 625 ~~r~~~~~~i~-~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
.++|++.+.|+ .+++.|++++++|+-....+..+|+..++......+ +.++..... +...-..
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~~i------~t~le~~~g----------g~~~g~~ 157 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLNLI------ASQIERGNG----------GWVLPLR 157 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCcEE------EEEeEEeCC----------ceEcCcc
Confidence 46899999996 788899999999999999999999997664321111 111110000 0001112
Q ss_pred eCchhHHHHHHHH-HHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 704 AEPRHKQEIVRML-KEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 704 ~~p~~K~~~v~~l-~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
+..++|..-++.. ........+-||+.||.|||+.||..++++
T Consensus 158 c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 158 CLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred CCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 4557787766644 323345679999999999999999999885
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0016 Score=76.87 Aligned_cols=127 Identities=21% Similarity=0.266 Sum_probs=77.3
Q ss_pred CCCchhHHHHHHHHh-CCCeEEEEcCCChHHHHHHHHHcCCC--C--------CCCcccccc------------------
Q 004437 625 PPRGGVDKAIDDCRG-AGIEVMVITGDNKSTAEAICRQIKLF--S--------GNEDLTGRS------------------ 675 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~-~gi~v~i~TGd~~~~a~~ia~~~gi~--~--------~~~~~~~~~------------------ 675 (753)
.+.+++.++|++|.+ .|+.|+++|||............++. . +...+....
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFV 593 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHH
Confidence 467899999999999 59999999999999888776655531 1 000000000
Q ss_pred -------ccchhh------hccCH-------HHHHHHH----HhcCCeEE-----EeeCc--hhHHHHHHHHHHc--CCe
Q 004437 676 -------FTGKEF------MALSS-------TQQIEAL----SKHGGKVF-----SRAEP--RHKQEIVRMLKEM--GEV 722 (753)
Q Consensus 676 -------~~~~~~------~~~~~-------~~~~~~~----~~~~~~v~-----~~~~p--~~K~~~v~~l~~~--~~~ 722 (753)
+..+.. ..... .+....+ ......+. ....| -+|...++.+.+. ...
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~ 673 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDF 673 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCE
Confidence 000000 00000 0111111 11111111 12333 4799999888875 358
Q ss_pred EEEEcCCcccHHHhhhc---CceEecCCCCccC
Q 004437 723 VAMTGDGVNDAPALKLA---DIGVAMGITGTEV 752 (753)
Q Consensus 723 v~~~GDg~ND~~~l~~A---~vgiamgi~g~~~ 752 (753)
++++||+.||.+|++.+ +.+|+|| ++...
T Consensus 674 vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~~s~ 705 (726)
T PRK14501 674 VLAIGDDTTDEDMFRALPETAITVKVG-PGESR 705 (726)
T ss_pred EEEECCCCChHHHHHhcccCceEEEEC-CCCCc
Confidence 99999999999999996 6999999 76554
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00041 Score=68.88 Aligned_cols=90 Identities=16% Similarity=0.147 Sum_probs=65.8
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe-
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 703 (753)
++.+++.++++.|+++|+++.++|+.....+..+.+..|+...- ..+++.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f-----------------------------~~~~~~~ 135 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYF-----------------------------SVLIGGD 135 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhC-----------------------------cEEEecC
Confidence 57899999999999999999999999999999999999984311 112221
Q ss_pred ----eCc--hhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceE
Q 004437 704 ----AEP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 704 ----~~p--~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
..| +-=..+++.+.-....++++||+.+|+.|.+.|++-.
T Consensus 136 ~~~~~Kp~p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~ 181 (213)
T TIGR01449 136 SLAQRKPHPDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPS 181 (213)
T ss_pred CCCCCCCChHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeE
Confidence 112 1112333333333467999999999999999999754
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.00046 Score=71.17 Aligned_cols=89 Identities=19% Similarity=0.195 Sum_probs=64.8
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEE-
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS- 702 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~- 702 (753)
.++.+++.++|+.|+++|++++++|+.+...+..+.+..|+.... ..+++
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f-----------------------------~~i~~~ 150 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYF-----------------------------RWIIGG 150 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhC-----------------------------eEEEec
Confidence 467899999999999999999999999998888888888874311 11221
Q ss_pred eeCchhH------HHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc
Q 004437 703 RAEPRHK------QEIVRMLKEMGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 703 ~~~p~~K------~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
...+..| ..+++.+.-..+.+++|||+.||+.|-+.|++
T Consensus 151 d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi 195 (272)
T PRK13223 151 DTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGV 195 (272)
T ss_pred CCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCC
Confidence 1112222 23333333335689999999999999999997
|
|
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00047 Score=69.85 Aligned_cols=44 Identities=34% Similarity=0.406 Sum_probs=36.6
Q ss_pred hhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 707 RHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 707 ~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
..|...++.++++ .+.|+++||+.||.+||..++-||.+| |+.+
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~ 211 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQP 211 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-H
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCH
Confidence 4699999999876 357899999999999999999999999 8864
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.00045 Score=68.11 Aligned_cols=97 Identities=21% Similarity=0.297 Sum_probs=66.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.+++|+++|+++.++|+.....+....+.+|+...-.. ++..++. ....-
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~----i~~~~~~------------------~~~KP 132 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDH----VIGSDEV------------------PRPKP 132 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheee----EEecCcC------------------CCCCC
Confidence 6789999999999999999999999999989888899998431110 0000000 00011
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceE
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
.|+-=..+++.++-....++||||+.+|+.+-+.||+.+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~ 171 (205)
T TIGR01454 133 APDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTAT 171 (205)
T ss_pred ChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeE
Confidence 122123333344333567999999999999999999853
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0013 Score=66.73 Aligned_cols=45 Identities=18% Similarity=0.274 Sum_probs=41.0
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGN 668 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~ 668 (753)
-+++|++.+.++.|++.|+++.++||-....+..+.+++|+..+.
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~ 164 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN 164 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence 457999999999999999999999999999999999999986543
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0022 Score=59.93 Aligned_cols=105 Identities=21% Similarity=0.210 Sum_probs=65.5
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHH---HHHHHc---CCCCCCCccccccccchhhhccCHHHHHHHHHhc
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAE---AICRQI---KLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKH 696 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~---~ia~~~---gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (753)
++.+.+++.+++++++++|++++++|||+...+. ....++ |...+...+ ....|..+..+ .
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~l--i~~~g~~~~~~---------~-- 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPV--LLSPDRLFAAL---------H-- 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceE--EEcCCcchhhh---------h--
Confidence 5788999999999999999999999999988874 555552 311111000 00111111000 0
Q ss_pred CCeEEEeeCchhHHHHHHHHHH-----cCCeEEEEcCCcccHHHhhhcCc
Q 004437 697 GGKVFSRAEPRHKQEIVRMLKE-----MGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 697 ~~~v~~~~~p~~K~~~v~~l~~-----~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
..+..+..-+.|...++.+.+ ....++++|++.+|+.+.+++++
T Consensus 92 -~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi 140 (157)
T smart00775 92 -REVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGI 140 (157)
T ss_pred -cccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCC
Confidence 112222222347777777776 34567889999999999777665
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0013 Score=65.86 Aligned_cols=91 Identities=18% Similarity=0.212 Sum_probs=66.6
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
-++.|++.++++.|++.|+++.++|+.....+..+.+.+|+...-. .+++.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~-----------------------------~~~~~ 141 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFD-----------------------------ALASA 141 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhccc-----------------------------EEEEc
Confidence 3578999999999999999999999999999999999999854211 12221
Q ss_pred -----eCchhHHHHHHHHHHc---CCeEEEEcCCcccHHHhhhcCceEe
Q 004437 704 -----AEPRHKQEIVRMLKEM---GEVVAMTGDGVNDAPALKLADIGVA 744 (753)
Q Consensus 704 -----~~p~~K~~~v~~l~~~---~~~v~~~GDg~ND~~~l~~A~vgia 744 (753)
..|.- .-+.+.+++. .+.++++||+.||+.+-+.||+..+
T Consensus 142 ~~~~~~Kp~~-~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i 189 (222)
T PRK10826 142 EKLPYSKPHP-EVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSI 189 (222)
T ss_pred ccCCCCCCCH-HHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEE
Confidence 11221 1223333333 4679999999999999999997543
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.00091 Score=66.42 Aligned_cols=95 Identities=18% Similarity=0.136 Sum_probs=65.7
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 705 (753)
+.+++.+.++.|+++|+++.++|+.....+..+.+.+|+...-. .++..+... ...-.
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~----~i~~~~~~~------------------~~Kp~ 140 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFD----VVITLDDVE------------------HAKPD 140 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhcee----EEEecCcCC------------------CCCCC
Confidence 67999999999999999999999999999999999999853111 011100000 00111
Q ss_pred chhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 706 PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 706 p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
|+--..+++.+.-....+++|||+.+|+.+-+.||+-
T Consensus 141 p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~ 177 (214)
T PRK13288 141 PEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTK 177 (214)
T ss_pred cHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCe
Confidence 2222344444443356799999999999999999983
|
|
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0015 Score=65.13 Aligned_cols=87 Identities=22% Similarity=0.312 Sum_probs=62.4
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCC----hHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCe
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDN----KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGK 699 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (753)
-.+.+++++.++.|++.|+++.++|+|. ..++..+.+..|+..... . ..
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~--f-------------------------~v 165 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNM--N-------------------------PV 165 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccc--e-------------------------eE
Confidence 3477889999999999999999999985 457888888899832110 0 12
Q ss_pred EEEeeCc--hhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc
Q 004437 700 VFSRAEP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 700 v~~~~~p--~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
+++..++ ..|... +++.+ .++++||..+|..+-+.||+
T Consensus 166 il~gd~~~K~~K~~~---l~~~~-i~I~IGDs~~Di~aA~~AGi 205 (237)
T PRK11009 166 IFAGDKPGQYTKTQW---LKKKN-IRIFYGDSDNDITAAREAGA 205 (237)
T ss_pred EEcCCCCCCCCHHHH---HHhcC-CeEEEcCCHHHHHHHHHcCC
Confidence 3332222 345543 34444 48999999999999999987
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0014 Score=65.89 Aligned_cols=97 Identities=15% Similarity=0.086 Sum_probs=66.6
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|++.|+++.++|+.+...+..+.+.+|+...-. .++.++.. ....-
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~----~i~~~~~~------------------~~~KP 152 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCA----VLIGGDTL------------------AERKP 152 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhccc----EEEecCcC------------------CCCCC
Confidence 478999999999999999999999999888888888888743111 01111000 00011
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceE
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
.|+-=..+++.++-....++||||+.+|+.|-+.||+..
T Consensus 153 ~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~ 191 (229)
T PRK13226 153 HPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPS 191 (229)
T ss_pred CHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcE
Confidence 122223444555545678999999999999999999753
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0012 Score=65.95 Aligned_cols=83 Identities=19% Similarity=0.308 Sum_probs=59.9
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCC----ChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEE
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGD----NKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd----~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 701 (753)
+.+++++.++.++++|+++.++|++ ...++..+.+.+|+.... ..++
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f-----------------------------~~i~ 165 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN-----------------------------PVIF 165 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe-----------------------------eEEE
Confidence 4445999999999999999999999 667889999999995311 1122
Q ss_pred EeeC----chhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc
Q 004437 702 SRAE----PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 702 ~~~~----p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
..-. ..+|. ..+++.+ .++|+||..||..+-+.|++
T Consensus 166 ~~d~~~~~Kp~~~---~~l~~~~-i~i~vGDs~~DI~aAk~AGi 205 (237)
T TIGR01672 166 AGDKPGQYQYTKT---QWIQDKN-IRIHYGDSDNDITAAKEAGA 205 (237)
T ss_pred CCCCCCCCCCCHH---HHHHhCC-CeEEEeCCHHHHHHHHHCCC
Confidence 2111 01233 2344444 47999999999999999986
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0047 Score=60.43 Aligned_cols=94 Identities=17% Similarity=0.061 Sum_probs=64.4
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEE
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS 702 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 702 (753)
.+++.+.+.++++.|++.|+++.++||.....+..+.+.+|+...-. .++.++. +..
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~----~~~~~~~-------------------~~~ 160 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFP----VQIWMED-------------------CPP 160 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCC----EEEeecC-------------------CCC
Confidence 34466777999999999999999999999999999999999853211 1111110 111
Q ss_pred eeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhc
Q 004437 703 RAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLA 739 (753)
Q Consensus 703 ~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A 739 (753)
.-.|+.-..+++.+.-....+++|||+.+|+.+-+.|
T Consensus 161 KP~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 161 KPNPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CcCHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 2223333444555554567899999999999886654
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.004 Score=64.03 Aligned_cols=89 Identities=15% Similarity=0.138 Sum_probs=64.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+...-. .+ +.+..
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~----~v------------------------i~~~~ 193 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS----VV------------------------QAGTP 193 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE----EE------------------------EecCC
Confidence 467999999999999999999999999999999999999853211 01 11111
Q ss_pred CchhHHHHHH-HHHH---cCCeEEEEcCCcccHHHhhhcCce
Q 004437 705 EPRHKQEIVR-MLKE---MGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 705 ~p~~K~~~v~-~l~~---~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
.+ .|...+. .+++ ....+++|||+.+|+.+-+.|++-
T Consensus 194 ~~-~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~ 234 (273)
T PRK13225 194 IL-SKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLI 234 (273)
T ss_pred CC-CCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCe
Confidence 11 1222222 2222 346799999999999999999974
|
|
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.003 Score=63.03 Aligned_cols=95 Identities=24% Similarity=0.307 Sum_probs=66.8
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC--CCCCccccccccchhhhccCHHHHHHHHHhcCCeEE
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF--SGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 701 (753)
.++.+|+.+.++.|++.|+++.++|+.....+..+.+.+|+. ..-. .++..++.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~----~i~~~~~~-------------------- 141 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVD----AVVCPSDV-------------------- 141 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCC----EEEcCCcC--------------------
Confidence 378999999999999999999999999999999999999885 2111 11111110
Q ss_pred EeeCchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceE
Q 004437 702 SRAEPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 702 ~~~~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
.+..|. ...+...+++. ...+++|||+.+|+.+-+.|++.+
T Consensus 142 ~~~KP~-p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 142 AAGRPA-PDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred CCCCCC-HHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCe
Confidence 011121 11222333332 357999999999999999999986
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0078 Score=57.01 Aligned_cols=114 Identities=8% Similarity=0.078 Sum_probs=75.1
Q ss_pred CCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCC-ChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHH
Q 004437 612 SDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGD-NKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQI 690 (753)
Q Consensus 612 ~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (753)
.+.......+-+-++.+++.+.++.|+++|+++.++|+. ....+..+...+|+........ +.
T Consensus 32 ~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~----------------~~ 95 (174)
T TIGR01685 32 NNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVP----------------MH 95 (174)
T ss_pred CCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCccc----------------HH
Confidence 334566666677778999999999999999999999987 8888888889898842111000 00
Q ss_pred HHHHhcCCeEEEeeCchhH--HHHHHHHHHc------CCeEEEEcCCcccHHHhhhcCceEe
Q 004437 691 EALSKHGGKVFSRAEPRHK--QEIVRMLKEM------GEVVAMTGDGVNDAPALKLADIGVA 744 (753)
Q Consensus 691 ~~~~~~~~~v~~~~~p~~K--~~~v~~l~~~------~~~v~~~GDg~ND~~~l~~A~vgia 744 (753)
... +..+.+...+..| ..+.+.+.+. ...+++|||...|+.+-+.|++-++
T Consensus 96 ~~F---d~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i 154 (174)
T TIGR01685 96 SLF---DDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSC 154 (174)
T ss_pred Hhc---eeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEE
Confidence 000 0122222211122 2334444432 3689999999999999999997543
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0055 Score=55.56 Aligned_cols=88 Identities=17% Similarity=0.157 Sum_probs=62.4
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCC--------hHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHh
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDN--------KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSK 695 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~--------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (753)
-++.+++.++++.|+++|++++++|+.. ...+..+.+.+|+...
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~---------------------------- 75 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPID---------------------------- 75 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEE----------------------------
Confidence 3578999999999999999999999998 6777888888887410
Q ss_pred cCCeEEEe--eCc--hhHHHHHHHHH-HcCCeEEEEcC-CcccHHHhhhcCc
Q 004437 696 HGGKVFSR--AEP--RHKQEIVRMLK-EMGEVVAMTGD-GVNDAPALKLADI 741 (753)
Q Consensus 696 ~~~~v~~~--~~p--~~K~~~v~~l~-~~~~~v~~~GD-g~ND~~~l~~A~v 741 (753)
..+++. ..| +-=..+++.++ -....++|||| ..+|+.+-+.|++
T Consensus 76 --~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi 125 (132)
T TIGR01662 76 --VLYACPHCRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGL 125 (132)
T ss_pred --EEEECCCCCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCC
Confidence 001110 112 11133444442 34578999999 6999999999986
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0041 Score=63.28 Aligned_cols=96 Identities=18% Similarity=0.162 Sum_probs=67.0
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.+.++.|++.|+++.++|+.....+....+.+|+...-. .++.+++.. ...-
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd----~iv~~~~~~------------------~~KP 165 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQ----AVIIGSECE------------------HAKP 165 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCc----EEEecCcCC------------------CCCC
Confidence 467899999999999999999999999999999999999853211 111111110 0011
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
.|+--..+++.+.-....+++|||+.+|+.+=+.|++-
T Consensus 166 ~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~ 203 (248)
T PLN02770 166 HPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMP 203 (248)
T ss_pred ChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCE
Confidence 12222344444444456799999999999999999973
|
|
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0037 Score=65.67 Aligned_cols=108 Identities=15% Similarity=0.101 Sum_probs=73.7
Q ss_pred cccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC-CCCccccccccchhhhccCHHHHHHHHHhcCCe
Q 004437 621 GLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS-GNEDLTGRSFTGKEFMALSSTQQIEALSKHGGK 699 (753)
Q Consensus 621 ~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (753)
...+++.+++.+++++|++.|++++++||++...+..+.+.+|+.. .-.. +...+.. ...+.. .
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~----i~~~~~~--------~~~~~~---~ 247 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDD----LIGRPPD--------MHFQRE---Q 247 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhh----hhCCcch--------hhhccc---C
Confidence 4678899999999999999999999999999999999999988853 1100 0000000 000000 0
Q ss_pred EEEeeCchhHHHHHHHHHH-cCCeEEEEcCCcccHHHhhhcCceE
Q 004437 700 VFSRAEPRHKQEIVRMLKE-MGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 700 v~~~~~p~~K~~~v~~l~~-~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
--.+-.|+-+...++.+.. ....++||||..+|+.+-+.|++-+
T Consensus 248 ~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 248 GDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred CCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 0012334556666665543 3478999999999999999999753
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0047 Score=60.42 Aligned_cols=94 Identities=12% Similarity=0.152 Sum_probs=65.0
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+++++|+++|+++.++|+-+...+....+.+|+...-. .++..++. ...
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd----~i~~s~~~--------------------~~~ 147 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFD----AVLSADAV--------------------RAY 147 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhh----eeEehhhc--------------------CCC
Confidence 467999999999999999999999999888888889999742110 11111110 011
Q ss_pred Cchh--HHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 705 EPRH--KQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 705 ~p~~--K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
.|.- =..+.+.+.-....+++|||+.+|+.+-+.||+-
T Consensus 148 KP~~~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~ 187 (198)
T TIGR01428 148 KPAPQVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFK 187 (198)
T ss_pred CCCHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCc
Confidence 2221 1233344433456799999999999999999874
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.006 Score=62.31 Aligned_cols=93 Identities=19% Similarity=0.203 Sum_probs=64.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+..... ..++.++.. . +.
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~---d~ii~~~~~-------------------~-~~ 155 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP---DYNVTTDDV-------------------P-AG 155 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC---ceEEccccC-------------------C-CC
Confidence 367899999999999999999999999999999988888754210 011111110 0 11
Q ss_pred CchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCc
Q 004437 705 EPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~v 741 (753)
.|. ...+.+.+++. .+.++||||+.+|+.+=+.|++
T Consensus 156 KP~-p~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi 195 (253)
T TIGR01422 156 RPA-PWMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGM 195 (253)
T ss_pred CCC-HHHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCC
Confidence 121 22333334333 3569999999999999999996
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.007 Score=61.79 Aligned_cols=96 Identities=10% Similarity=0.061 Sum_probs=66.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|+++|+++.++|+.....+..+.+.+|+...-. .+++++... ...-
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd----~ii~~~d~~------------------~~KP 166 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFS----VVLAAEDVY------------------RGKP 166 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCc----EEEecccCC------------------CCCC
Confidence 468999999999999999999999999999999999999853211 111111110 0001
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
.|+-=...++.+.-....++||||..+|+.+=+.|++-
T Consensus 167 ~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~ 204 (260)
T PLN03243 167 DPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMK 204 (260)
T ss_pred CHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCE
Confidence 11111333444443456799999999999999999984
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.0076 Score=60.10 Aligned_cols=93 Identities=17% Similarity=0.138 Sum_probs=63.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.++++.|+++|++++++|+-+...+....+.+|+...-. .++.+++. .+.
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~----~i~~~~~~--------------------~~~ 149 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFD----AVITSEEE--------------------GVE 149 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhcc----EEEEeccC--------------------CCC
Confidence 478999999999999999999999999888888888888743111 01111100 011
Q ss_pred Cchh--HHHHHHHHHHcCCeEEEEcCCc-ccHHHhhhcCc
Q 004437 705 EPRH--KQEIVRMLKEMGEVVAMTGDGV-NDAPALKLADI 741 (753)
Q Consensus 705 ~p~~--K~~~v~~l~~~~~~v~~~GDg~-ND~~~l~~A~v 741 (753)
.|.. =..+++.+.-....+++|||.. +|+.+=+.||+
T Consensus 150 KP~~~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~ 189 (221)
T TIGR02253 150 KPHPKIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGM 189 (221)
T ss_pred CCCHHHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCC
Confidence 2221 1222333332346799999998 99999999987
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.0054 Score=56.44 Aligned_cols=109 Identities=16% Similarity=0.172 Sum_probs=72.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe-
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 703 (753)
.++|+-++.++.+++.+++++++|+....-...+-..++=...... ..+.+.+..-.... + ..+++..
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~--idi~sn~~~ih~dg--------~-h~i~~~~d 141 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYC--IDIVSNNDYIHIDG--------Q-HSIKYTDD 141 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceee--eEEeecCceEcCCC--------c-eeeecCCc
Confidence 4789999999999999999999999988877777776652110000 00000000000000 0 0011111
Q ss_pred -eCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEe
Q 004437 704 -AEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA 744 (753)
Q Consensus 704 -~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 744 (753)
..-.+|...|+.+++..+.+.++|||+.|+.|-+.+|+=+|
T Consensus 142 s~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 142 SQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred cccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 12357999999999999999999999999999998887664
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.019 Score=58.27 Aligned_cols=87 Identities=11% Similarity=0.223 Sum_probs=62.2
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHH---HHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCe
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKST---AEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGK 699 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (753)
..++-|++.+.++.|++.|+++.++|++.... +....+..|+..... ..
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~----------------------------d~ 167 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADE----------------------------EH 167 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCc----------------------------ce
Confidence 34567999999999999999999999998443 345567788853211 24
Q ss_pred EEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhh
Q 004437 700 VFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALK 737 (753)
Q Consensus 700 v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~ 737 (753)
++.|-....|..-.+.+.+.-..++++||..+|.....
T Consensus 168 lllr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 168 LLLKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred EEeCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 55554444566666666665567999999999996543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.037 Score=58.97 Aligned_cols=47 Identities=26% Similarity=0.378 Sum_probs=37.0
Q ss_pred eeCc---hhHHHHHHHHHHc-C---C---eEEEEcCCcccHHHhhh-----cCceEecCCCCc
Q 004437 703 RAEP---RHKQEIVRMLKEM-G---E---VVAMTGDGVNDAPALKL-----ADIGVAMGITGT 750 (753)
Q Consensus 703 ~~~p---~~K~~~v~~l~~~-~---~---~v~~~GDg~ND~~~l~~-----A~vgiamgi~g~ 750 (753)
.+.| -+|...++.+.+. + . .++++||+.||.+||+. +++||+|| +|.
T Consensus 293 EVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~ 354 (384)
T PLN02580 293 EVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVP 354 (384)
T ss_pred EEecCCCCCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCC
Confidence 4455 3899999888765 2 1 24899999999999996 69999999 765
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.011 Score=59.09 Aligned_cols=90 Identities=11% Similarity=-0.010 Sum_probs=63.8
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+.+++.+.++.|+++|+++.++|.-+...+....+..|+...-. ..+.+..
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd----------------------------~iv~s~~ 144 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLD----------------------------LLLSTHT 144 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCC----------------------------EEEEeee
Confidence 578999999999999999999999998888888778888743110 1222221
Q ss_pred CchhH------HHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 705 EPRHK------QEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 705 ~p~~K------~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
....| ..+.+.+.-....+++|||+.+|+.+=+.||+.
T Consensus 145 ~~~~KP~p~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 145 FGYPKEDQRLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIR 188 (224)
T ss_pred CCCCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCe
Confidence 11112 222233333356799999999999999999995
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=96.31 E-value=0.028 Score=55.39 Aligned_cols=81 Identities=17% Similarity=0.136 Sum_probs=57.7
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHH---HHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeE
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKST---AEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKV 700 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 700 (753)
-|.-+++.++++.|++.|++|+++|||.... +..-.++.|+..- ..+
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~------------------------------~~L 168 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGW------------------------------KHL 168 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCc------------------------------Cee
Confidence 4677999999999999999999999999755 3344556676421 234
Q ss_pred EEeeC-chh------HHHHHHHHHHcCC-eEEEEcCCcccHH
Q 004437 701 FSRAE-PRH------KQEIVRMLKEMGE-VVAMTGDGVNDAP 734 (753)
Q Consensus 701 ~~~~~-p~~------K~~~v~~l~~~~~-~v~~~GDg~ND~~ 734 (753)
+.|.. ... |...-+.+.+.|+ +++.+||..+|..
T Consensus 169 iLR~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 169 ILRGLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred eecCCCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 55531 111 6666666776766 5677999999973
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.018 Score=54.89 Aligned_cols=96 Identities=8% Similarity=-0.069 Sum_probs=56.0
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChH--------HHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKS--------TAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHG 697 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~--------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 697 (753)
+.|++.+++++|++.|+++.++|+.... .+....+..|+..- +.+....++..
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~---~~~~~~~~~~~---------------- 89 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDI---YLCPHKHGDGC---------------- 89 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEE---EECcCCCCCCC----------------
Confidence 6799999999999999999999987631 12223444555210 00000000000
Q ss_pred CeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 698 GKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 698 ~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
-...-.|+-=..+++.+.-..+.+++|||..+|+.+=+.|++-
T Consensus 90 --~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~ 132 (173)
T PRK06769 90 --ECRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNAT 132 (173)
T ss_pred --CCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCe
Confidence 0001111111333444433356799999999999999999973
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.013 Score=56.30 Aligned_cols=88 Identities=18% Similarity=0.235 Sum_probs=60.8
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe-
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 703 (753)
++.+++.+.++.|++.|++++++|+-.... ..+...+|+...-. ..+.+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~----------------------------~i~~~~~ 135 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFD----------------------------VVIFSGD 135 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCC----------------------------EEEEcCC
Confidence 578999999999999999999999988877 55555577743111 112211
Q ss_pred ---eCc--hhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc
Q 004437 704 ---AEP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 704 ---~~p--~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
..| +--..+.+.+.-....++++||...|+.+-+.||+
T Consensus 136 ~~~~KP~~~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 136 VGRGKPDPDIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred CCCCCCCHHHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCC
Confidence 112 11133333443345789999999999999999887
|
HAD subfamilies caused by an overly broad single model. |
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.0053 Score=58.32 Aligned_cols=96 Identities=18% Similarity=0.270 Sum_probs=67.0
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
.++.+++.+.++.|++.|++++++|+.+........+.+|+...-. .++..++...
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~----~i~~~~~~~~-------------------- 131 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFD----EIISSDDVGS-------------------- 131 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCS----EEEEGGGSSS--------------------
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCcccccccccccccccccc----cccccchhhh--------------------
Confidence 3578999999999999999999999999999999999999852111 1111111100
Q ss_pred eCc--hhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceE
Q 004437 704 AEP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 704 ~~p--~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
..| +-=..+++.+.-..+.+++|||+..|+.+-+.||+-.
T Consensus 132 ~Kp~~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 132 RKPDPDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp STTSHHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred hhhHHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 011 1113344444444678999999999999999998743
|
... |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=96.27 E-value=0.0075 Score=58.20 Aligned_cols=92 Identities=14% Similarity=0.141 Sum_probs=58.9
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.++|+.|+++|+++.++|+... +....+.+|+...-. .++.+.+. .+.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~----~~~~~~~~--------------------~~~ 140 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFD----AIVDPAEI--------------------KKG 140 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCc----EEEehhhc--------------------CCC
Confidence 5779999999999999999999997543 456778888743211 11111110 011
Q ss_pred Cch--hHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 705 EPR--HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 705 ~p~--~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
.|. -=...++.+.-....+++|||+.+|+.+-+.|++-
T Consensus 141 kp~p~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 141 KPDPEIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred CCChHHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCE
Confidence 222 11222333322245799999999999999999974
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.013 Score=60.27 Aligned_cols=93 Identities=16% Similarity=0.132 Sum_probs=62.8
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+.|++.+.|+.|++.|+++.++|+.....+..+.+.+|+..... ..++.++.. ...
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~---d~i~~~~~~--------------------~~~ 157 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP---DHVVTTDDV--------------------PAG 157 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc---eEEEcCCcC--------------------CCC
Confidence 467899999999999999999999999988888878777643110 001111100 001
Q ss_pred CchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCc
Q 004437 705 EPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~v 741 (753)
.| +..-+.+.+++. ...++||||+.+|+.+=+.|++
T Consensus 158 KP-~p~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 158 RP-YPWMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred CC-ChHHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 12 123334444443 2569999999999999999996
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.016 Score=55.03 Aligned_cols=84 Identities=14% Similarity=0.206 Sum_probs=59.5
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCC-hHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDN-KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
.+.+++.++++.|++.|++++++|+.+ ...+..+++.+|+.. ....
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~---------------------------------~~~~ 89 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV---------------------------------LPHA 89 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE---------------------------------EcCC
Confidence 567899999999999999999999988 566777778777631 1111
Q ss_pred eCchhH--HHHHHHHHHcCCeEEEEcCCc-ccHHHhhhcCc
Q 004437 704 AEPRHK--QEIVRMLKEMGEVVAMTGDGV-NDAPALKLADI 741 (753)
Q Consensus 704 ~~p~~K--~~~v~~l~~~~~~v~~~GDg~-ND~~~l~~A~v 741 (753)
..|... ..+++.+.-....++||||.. .|+.+=+.|++
T Consensus 90 ~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi 130 (170)
T TIGR01668 90 VKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGS 130 (170)
T ss_pred CCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCC
Confidence 123211 222223322356799999998 79999999987
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.012 Score=58.51 Aligned_cols=99 Identities=14% Similarity=0.072 Sum_probs=64.6
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.+.++.|+++|+++.++|+.....+....+..|+.... .+++++... ...-
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~~-----~i~~~~~~~------------------~~KP 139 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAPE-----VFVTAERVK------------------RGKP 139 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCcc-----EEEEHHHhc------------------CCCC
Confidence 47899999999999999999999998877666666667763211 111111110 0011
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce-EecC
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG-VAMG 746 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg 746 (753)
.|+-=....+.+.-....+++|||+.+|+.+=+.|++- |++.
T Consensus 140 ~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~ 182 (218)
T PRK11587 140 EPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVN 182 (218)
T ss_pred CcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEEC
Confidence 12222333344443457899999999999999999973 4443
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.014 Score=62.21 Aligned_cols=94 Identities=14% Similarity=0.103 Sum_probs=66.7
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+|+.+.++.|+++|+++.++|+.....+..+.+.+||...-. .++.+++. .+.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd----~Iv~sddv--------------------~~~ 271 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFS----VIVAAEDV--------------------YRG 271 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHce----EEEecCcC--------------------CCC
Confidence 367999999999999999999999999999999999999853111 11111110 011
Q ss_pred Cch--hHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 705 EPR--HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 705 ~p~--~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
.|+ -=...++.+.-....++||||..+|+.+-+.|++-
T Consensus 272 KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~ 311 (381)
T PLN02575 272 KPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMK 311 (381)
T ss_pred CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCE
Confidence 222 11334444444467899999999999999999973
|
|
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.0073 Score=58.26 Aligned_cols=93 Identities=14% Similarity=0.150 Sum_probs=60.9
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
-++.|++.+.++.|++.|+++.++|+. ..+..+.+.+|+...-. .++.++. ..+
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~----~v~~~~~--------------------~~~ 140 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFD----AIVDADE--------------------VKE 140 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCC----Eeeehhh--------------------CCC
Confidence 368899999999999999999999987 55777788888743111 0111000 001
Q ss_pred eCchhH--HHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 704 AEPRHK--QEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 704 ~~p~~K--~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
..|... ..+.+.+.-..+.+++|||+.+|+.+=+.||+.
T Consensus 141 ~kp~~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 141 GKPHPETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred CCCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCe
Confidence 122211 222333332346799999999999999999874
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.054 Score=51.61 Aligned_cols=38 Identities=8% Similarity=0.214 Sum_probs=34.5
Q ss_pred hhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 629 GVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 629 ~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
.+...+.+|+++|+.|+.+|.........+-+.+|+..
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~ 64 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQG 64 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCC
Confidence 46788999999999999999999999999999999863
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.024 Score=58.90 Aligned_cols=98 Identities=22% Similarity=0.268 Sum_probs=62.7
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.+.++.|++.|+++.++|+.+......+.+..+........ .++.+++ ....
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~--~~v~~~~--------------------~~~~ 201 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGL--DVFAGDD--------------------VPKK 201 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCce--EEEeccc--------------------cCCC
Confidence 47899999999999999999999999888777666655321100000 0001110 0011
Q ss_pred Cch--hHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEe
Q 004437 705 EPR--HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA 744 (753)
Q Consensus 705 ~p~--~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 744 (753)
.|+ -=..+++.+.-....+++|||+.+|+.+-+.||+.+.
T Consensus 202 KP~p~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i 243 (286)
T PLN02779 202 KPDPDIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCI 243 (286)
T ss_pred CCCHHHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEE
Confidence 122 1133344444345679999999999999999997554
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=95.81 E-value=0.035 Score=51.34 Aligned_cols=97 Identities=22% Similarity=0.247 Sum_probs=58.0
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHcCCCCCCCccccccccchhhhccCHHHH
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNK---------------STAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQ 689 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (753)
++.+++.++++.|++.|+++.++|..+. ..+..+.+.+|+..... +.......+
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~~~~~~~---------- 95 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGV-LFCPHHPAD---------- 95 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEE-EECCCCCCC----------
Confidence 4689999999999999999999998763 34455667777631000 000000000
Q ss_pred HHHHHhcCCeEEEeeCchhH--HHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 690 IEALSKHGGKVFSRAEPRHK--QEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 690 ~~~~~~~~~~v~~~~~p~~K--~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
....+ .|+-+ ..+++.+.-..+.+++|||...|+.+-+.|++-
T Consensus 96 ---------~~~~~-KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 96 ---------NCSCR-KPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred ---------CCCCC-CCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCC
Confidence 00001 22211 222222322346799999999999999999874
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.029 Score=52.25 Aligned_cols=83 Identities=18% Similarity=0.245 Sum_probs=55.8
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee-
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA- 704 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~- 704 (753)
..+++.+.++.|++.|+++.++|+.....+....+.. +.... ..+++..
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f-----------------------------~~i~~~~~ 114 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYF-----------------------------DLILGSDE 114 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcC-----------------------------cEEEecCC
Confidence 3478999999999999999999999998888777664 32111 1122211
Q ss_pred ---CchhHHHHHHHHHHc---CCeEEEEcCCcccHHHhhhcC
Q 004437 705 ---EPRHKQEIVRMLKEM---GEVVAMTGDGVNDAPALKLAD 740 (753)
Q Consensus 705 ---~p~~K~~~v~~l~~~---~~~v~~~GDg~ND~~~l~~A~ 740 (753)
.|. ...+...+++. . .++++||..+|+.+-+.|+
T Consensus 115 ~~~Kp~-~~~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 115 FGAKPE-PEIFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CCCCcC-HHHHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 121 12222223322 4 7999999999999887765
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.028 Score=55.20 Aligned_cols=89 Identities=20% Similarity=0.133 Sum_probs=58.5
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+-|++.++++.|+++|+++.++|+-... +....+.+|+...-. ..+.+..
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd----------------------------~i~~s~~ 155 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFD----------------------------FVVTSYE 155 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcc----------------------------eEEeecc
Confidence 57799999999999999999999986553 466677777732111 1111111
Q ss_pred ----Cchh--HHHHHHHHHHcCCeEEEEcCCc-ccHHHhhhcCce
Q 004437 705 ----EPRH--KQEIVRMLKEMGEVVAMTGDGV-NDAPALKLADIG 742 (753)
Q Consensus 705 ----~p~~--K~~~v~~l~~~~~~v~~~GDg~-ND~~~l~~A~vg 742 (753)
.|+- =..+++.+.-....+++|||+. +|+.+=+.||+-
T Consensus 156 ~~~~KP~~~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 156 VGAEKPDPKIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred cCCCCCCHHHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 1221 1222333333356899999997 899998888764
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=95.66 E-value=0.012 Score=54.54 Aligned_cols=96 Identities=16% Similarity=0.094 Sum_probs=64.2
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
-.+||++.+.++.|+ .++++.++|.-....+..+.+.+++... +...++++++.. +
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~---~f~~i~~~~d~~--------------------~ 99 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKY---FGYRRLFRDECV--------------------F 99 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCC---EeeeEEECcccc--------------------c
Confidence 347999999999999 5799999999999999999999887421 111111111110 0
Q ss_pred eCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEe
Q 004437 704 AEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA 744 (753)
Q Consensus 704 ~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 744 (753)
..|. =...++.+....+.+++|||..+|..+-+.|++-|.
T Consensus 100 ~KP~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 100 VKGK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred cCCe-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 1121 011223333346789999999999998877776654
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.051 Score=52.26 Aligned_cols=26 Identities=35% Similarity=0.432 Sum_probs=24.3
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDN 651 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~ 651 (753)
+.+++.+++++|++.|+++.++|..+
T Consensus 30 ~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 30 PIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 67999999999999999999999876
|
|
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.027 Score=61.01 Aligned_cols=94 Identities=15% Similarity=0.150 Sum_probs=62.5
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHH-HcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR-QIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
++.+++.+.++.|++.|+++.++|+.....+....+ ..|+...-. .++.++.. .+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd----~ii~~d~v--------------------~~ 148 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFS----VIVGGDEV--------------------EK 148 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCC----EEEehhhc--------------------CC
Confidence 467999999999999999999999998888776654 567632111 11111110 01
Q ss_pred eCc--hhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 704 AEP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 704 ~~p--~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
..| +-=..+++.+.-..+.+++|||+.+|+.+-+.||+.
T Consensus 149 ~KP~p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~ 189 (382)
T PLN02940 149 GKPSPDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGME 189 (382)
T ss_pred CCCCHHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCE
Confidence 122 111333334433457899999999999999999974
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.039 Score=61.67 Aligned_cols=92 Identities=14% Similarity=0.087 Sum_probs=64.4
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-. .++++++.. ..-
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~----~i~~~d~v~-------------------~~~ 386 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVT----ETFSIEQIN-------------------SLN 386 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcc----eeEecCCCC-------------------CCC
Confidence 578999999999999999999999999999999999999853211 111111110 011
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
.|+-=...++.+ ....+++|||+.+|+.+-+.|++
T Consensus 387 kP~~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~ 421 (459)
T PRK06698 387 KSDLVKSILNKY--DIKEAAVVGDRLSDINAAKDNGL 421 (459)
T ss_pred CcHHHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCC
Confidence 232111222222 24679999999999999999997
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.032 Score=50.16 Aligned_cols=39 Identities=5% Similarity=0.108 Sum_probs=34.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCC-ChHHHHHHHHHcC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGD-NKSTAEAICRQIK 663 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd-~~~~a~~ia~~~g 663 (753)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 78999999999999999999999999 7777777767666
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.035 Score=52.13 Aligned_cols=87 Identities=16% Similarity=0.183 Sum_probs=57.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCC---------------hHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHH
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDN---------------KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQ 689 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (753)
++-+++.+++++|+++|++++++|-.. ...+..+.+.+|+.- .
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~f--d-------------------- 86 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIF--D-------------------- 86 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCce--e--------------------
Confidence 366899999999999999999999752 334556667777630 0
Q ss_pred HHHHHhcCCeEEE-----ee----CchhHHHHHHHH-HHc---CCeEEEEcCCcccHHHhhhcCceE
Q 004437 690 IEALSKHGGKVFS-----RA----EPRHKQEIVRML-KEM---GEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 690 ~~~~~~~~~~v~~-----~~----~p~~K~~~v~~l-~~~---~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
..+++ .. .|. ..++..+ ++. ...++||||+.+|+.+-+.|++-.
T Consensus 87 --------~ii~~~~~~~~~~~~~KP~--~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~ 143 (161)
T TIGR01261 87 --------DVLICPHFPDDNCDCRKPK--IKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRG 143 (161)
T ss_pred --------EEEECCCCCCCCCCCCCCC--HHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeE
Confidence 01111 00 122 2223222 222 457999999999999999999743
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.18 Score=60.20 Aligned_cols=38 Identities=11% Similarity=0.183 Sum_probs=32.5
Q ss_pred CCCCchhHHHHHHH-HhCCCeEEEEcCCChHHHHHHHHH
Q 004437 624 DPPRGGVDKAIDDC-RGAGIEVMVITGDNKSTAEAICRQ 661 (753)
Q Consensus 624 d~~r~~~~~~i~~l-~~~gi~v~i~TGd~~~~a~~ia~~ 661 (753)
-.+.+++.+++++| ++.|+.|+++|||...+.......
T Consensus 615 ~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 615 KSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred CCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 35678999999997 778999999999999998877644
|
|
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.082 Score=50.49 Aligned_cols=122 Identities=21% Similarity=0.285 Sum_probs=70.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCcccccccc-----chh----------hhccCHHHH
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFT-----GKE----------FMALSSTQQ 689 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~-----~~~----------~~~~~~~~~ 689 (753)
.+-|++.++++.|++.=-.+++ |---..-+..+|..+|+.....+.....+. .++ ...+..+++
T Consensus 83 ~lvPgA~etm~~l~~~~tp~v~-STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQERWTPVVI-STSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhccCCceEE-eccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 3568999999999987444444 444455677899999985433221111111 000 011122222
Q ss_pred HHHHHhcCCeEEEeeCchh---------------HHHHHHHHHHc---CCeEEEEcCCcccHHHhhhcC-c-eEecCCCC
Q 004437 690 IEALSKHGGKVFSRAEPRH---------------KQEIVRMLKEM---GEVVAMTGDGVNDAPALKLAD-I-GVAMGITG 749 (753)
Q Consensus 690 ~~~~~~~~~~v~~~~~p~~---------------K~~~v~~l~~~---~~~v~~~GDg~ND~~~l~~A~-v-giamgi~g 749 (753)
.+.+. .+|.|..|.. |.++++.+.+. ....+++||++.|+.||+.+. - |+|+.-||
T Consensus 162 fe~lD----e~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNG 237 (315)
T COG4030 162 FEKLD----ELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNG 237 (315)
T ss_pred HHHHH----HHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecC
Confidence 22222 2455555543 45555555443 345789999999999999984 3 36666677
Q ss_pred cc
Q 004437 750 TE 751 (753)
Q Consensus 750 ~~ 751 (753)
.+
T Consensus 238 Ne 239 (315)
T COG4030 238 NE 239 (315)
T ss_pred Cc
Confidence 65
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.08 E-value=0.069 Score=53.32 Aligned_cols=88 Identities=20% Similarity=0.178 Sum_probs=61.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.++++.|+ +|+++.++|......+....+.+|+...-. ..+.+..
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd----------------------------~v~~~~~ 145 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFD----------------------------LLVISEQ 145 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcC----------------------------EEEEECc
Confidence 36799999999999 689999999998888888888888742110 1222221
Q ss_pred ----CchhHHHHHHHHHHc----CCeEEEEcCCc-ccHHHhhhcCce
Q 004437 705 ----EPRHKQEIVRMLKEM----GEVVAMTGDGV-NDAPALKLADIG 742 (753)
Q Consensus 705 ----~p~~K~~~v~~l~~~----~~~v~~~GDg~-ND~~~l~~A~vg 742 (753)
.|. ..-+...+.+. .+.+++|||+. +|+.+=+.||+-
T Consensus 146 ~~~~KP~-p~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~ 191 (224)
T PRK09449 146 VGVAKPD-VAIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGID 191 (224)
T ss_pred cCCCCCC-HHHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCc
Confidence 222 22223333333 25799999998 799999999974
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.84 E-value=0.11 Score=55.21 Aligned_cols=90 Identities=14% Similarity=0.057 Sum_probs=58.3
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCC---------------ChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHH
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGD---------------NKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQ 688 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 688 (753)
-++.|++.+++++|+++|++++|+|.- ....+..+.+..|+.- .
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f--d------------------- 87 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF--D------------------- 87 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce--e-------------------
Confidence 357899999999999999999999984 1223445666666621 0
Q ss_pred HHHHHHhcCCeEEEe-----e--CchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceE
Q 004437 689 QIEALSKHGGKVFSR-----A--EPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 689 ~~~~~~~~~~~v~~~-----~--~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
..+++- . ...-|..++..+.++ ...+.||||+.+|..+=+.|++-.
T Consensus 88 ---------~i~i~~~~~sd~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~ 144 (354)
T PRK05446 88 ---------EVLICPHFPEDNCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKG 144 (354)
T ss_pred ---------eEEEeCCcCcccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeE
Confidence 011110 0 011123334333222 478999999999999999999853
|
|
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.078 Score=52.83 Aligned_cols=87 Identities=18% Similarity=0.221 Sum_probs=63.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe-
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 703 (753)
++.+++.+.+++|++. ++++++|+-....+..+.+.+|+...- ..+++.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~f-----------------------------d~i~~~~ 146 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFF-----------------------------DDIFVSE 146 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhc-----------------------------CEEEEcC
Confidence 5779999999999999 999999999998888889999884311 122221
Q ss_pred e----CchhH--HHHHHHH-HHcCCeEEEEcCCc-ccHHHhhhcCc
Q 004437 704 A----EPRHK--QEIVRML-KEMGEVVAMTGDGV-NDAPALKLADI 741 (753)
Q Consensus 704 ~----~p~~K--~~~v~~l-~~~~~~v~~~GDg~-ND~~~l~~A~v 741 (753)
. .|+.. ...++.+ .-....+++|||+. +|+.+=+.+|+
T Consensus 147 ~~~~~KP~~~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~ 192 (224)
T TIGR02254 147 DAGIQKPDKEIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGL 192 (224)
T ss_pred ccCCCCCCHHHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCC
Confidence 1 23221 3334444 32346799999998 89999999996
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=94.68 E-value=0.1 Score=51.87 Aligned_cols=89 Identities=20% Similarity=0.196 Sum_probs=56.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHH-HHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEA-ICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~-ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
++.+++.+.|+.|++.|+++.++||-....... ..+..++...- ..+++.
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f-----------------------------~~i~~~ 128 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLM-----------------------------HHVVTG 128 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhC-----------------------------CEEEEC
Confidence 467999999999999999999999987653332 22222331100 112211
Q ss_pred e---------CchhHHHHHHHHH---HcCCeEEEEcCCcccHHHhhhcCce
Q 004437 704 A---------EPRHKQEIVRMLK---EMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 704 ~---------~p~~K~~~v~~l~---~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
- .|+-=...++.+. -..+.+++|||+..|+.+-+.||+-
T Consensus 129 ~~~~~~~~KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~ 179 (220)
T PLN02811 129 DDPEVKQGKPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMS 179 (220)
T ss_pred ChhhccCCCCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCe
Confidence 1 1111133334443 2246799999999999999999973
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.61 E-value=0.18 Score=46.21 Aligned_cols=83 Identities=17% Similarity=0.275 Sum_probs=60.9
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
...|++++=+..++.+|+++.++|--+...+...++.+|+.. ++--.
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~f---------------------------------i~~A~ 92 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPF---------------------------------IYRAK 92 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCce---------------------------------eeccc
Confidence 477899999999999999999999999999999999999842 22223
Q ss_pred CchhH--HHHHHHHHHcCCeEEEEcCCc-ccHHHhhhcC
Q 004437 705 EPRHK--QEIVRMLKEMGEVVAMTGDGV-NDAPALKLAD 740 (753)
Q Consensus 705 ~p~~K--~~~v~~l~~~~~~v~~~GDg~-ND~~~l~~A~ 740 (753)
.|--+ .+.++.++-..+.|+|+||.. .|+-+=+.|+
T Consensus 93 KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G 131 (175)
T COG2179 93 KPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAG 131 (175)
T ss_pred CccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccC
Confidence 34332 233444444477899999976 5766544444
|
|
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=94.58 E-value=0.18 Score=50.09 Aligned_cols=110 Identities=26% Similarity=0.342 Sum_probs=68.8
Q ss_pred CCCchhHHHHHHH--HhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchh-hhccCHHHHHHHHHhcCCeEE
Q 004437 625 PPRGGVDKAIDDC--RGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKE-FMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 625 ~~r~~~~~~i~~l--~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~ 701 (753)
|+.++.+++++.+ ++.|+.++++|.-+..-...+.+.-|+...-.. +++... +.. .....+...+ .+-+
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~----I~TNpa~~~~---~G~l~v~pyh-~h~C 142 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSE----IFTNPACFDA---DGRLRVRPYH-SHGC 142 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccce----EEeCCceecC---CceEEEeCcc-CCCC
Confidence 5778999999999 568999999999999999999999998643211 111110 000 0000000000 1122
Q ss_pred EeeCc-hhHHHHHHHHHHc----C---CeEEEEcCCcccH-HHhh--hcCce
Q 004437 702 SRAEP-RHKQEIVRMLKEM----G---EVVAMTGDGVNDA-PALK--LADIG 742 (753)
Q Consensus 702 ~~~~p-~~K~~~v~~l~~~----~---~~v~~~GDg~ND~-~~l~--~A~vg 742 (753)
.++.| -=|..+++.+.+. | .+|+++|||.||. |+++ .+|+-
T Consensus 143 ~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v 194 (234)
T PF06888_consen 143 SLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVV 194 (234)
T ss_pred CcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEE
Confidence 23333 2589999888765 4 6899999999994 5543 45543
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=94.47 E-value=0.16 Score=48.48 Aligned_cols=27 Identities=19% Similarity=0.315 Sum_probs=24.5
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCCh
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNK 652 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~ 652 (753)
+.|++.++|++|+++|+++.++|.-+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 568999999999999999999998763
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=94.23 E-value=0.13 Score=48.68 Aligned_cols=40 Identities=13% Similarity=0.237 Sum_probs=31.8
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChH------------HHHHHHHHcCCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKS------------TAEAICRQIKLF 665 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~------------~a~~ia~~~gi~ 665 (753)
+-+++.+++++|+++|+++.++|..+.. .+..+.+.+|+.
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~ 94 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVP 94 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCC
Confidence 3489999999999999999999975542 345677888873
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.22 Score=50.36 Aligned_cols=48 Identities=10% Similarity=0.164 Sum_probs=38.5
Q ss_pred EEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHH--HHHHHcCCC
Q 004437 618 GVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAE--AICRQIKLF 665 (753)
Q Consensus 618 G~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~--~ia~~~gi~ 665 (753)
|.+.-...+-|++.+++++|+++|+++.++|.-....+. ...+.+|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 455556778999999999999999999999996654443 566888885
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=94.08 E-value=0.18 Score=49.89 Aligned_cols=98 Identities=15% Similarity=0.114 Sum_probs=63.0
Q ss_pred ccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcC---CCCCCCccccccccchhhhccCHHHHHHHHHhcCC
Q 004437 622 LRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIK---LFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGG 698 (753)
Q Consensus 622 ~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~g---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (753)
++-++.+++.+++++|+++|+++.++|..+......+.+..+ +...-.. .+ . .
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~----~f-----d---------------~ 147 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSG----YF-----D---------------T 147 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcce----EE-----E---------------e
Confidence 445789999999999999999999999998877666655542 2110000 00 0 0
Q ss_pred eEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceE
Q 004437 699 KVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 699 ~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
.+...-.|+-=..+++.+.-..+.++++||...|+.+=+.||+-.
T Consensus 148 ~~g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 148 TVGLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHT 192 (220)
T ss_pred CcccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEE
Confidence 111111122123444444434577999999999999999999854
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=94.02 E-value=0.18 Score=53.41 Aligned_cols=89 Identities=11% Similarity=0.105 Sum_probs=65.4
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH----cCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeE
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ----IKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKV 700 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 700 (753)
++.+++.++|+.|++.|+++.++|.-+...+..+.+. +++...- ..+
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f-----------------------------~~~ 81 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDF-----------------------------DAR 81 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHe-----------------------------eEE
Confidence 3578999999999999999999999999999988887 6663210 122
Q ss_pred EEeeCchhHHHHHHHHHH----cCCeEEEEcCCcccHHHhhhcCceEe
Q 004437 701 FSRAEPRHKQEIVRMLKE----MGEVVAMTGDGVNDAPALKLADIGVA 744 (753)
Q Consensus 701 ~~~~~p~~K~~~v~~l~~----~~~~v~~~GDg~ND~~~l~~A~vgia 744 (753)
.+. +.-|...++...+ ....++++||...|+.+.+.+...+.
T Consensus 82 ~~~--~~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~ 127 (320)
T TIGR01686 82 SIN--WGPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKT 127 (320)
T ss_pred EEe--cCchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCc
Confidence 222 3334444443333 34789999999999999999887653
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=93.91 E-value=0.13 Score=43.91 Aligned_cols=89 Identities=21% Similarity=0.305 Sum_probs=55.4
Q ss_pred EEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHH---HHHcCCCCCCCccccccccchhhhccCHHHHHHHHH
Q 004437 618 GVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAI---CRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALS 694 (753)
Q Consensus 618 G~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~i---a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (753)
|++...+.+-|++.++|+.|+++|++++++|-....+...+ .+.+|+.-..
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~-------------------------- 60 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDE-------------------------- 60 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--G--------------------------
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCc--------------------------
Confidence 44555777889999999999999999999999876554443 3667774221
Q ss_pred hcCCeEEEeeCchhHHHHHHHHHH--cCCeEEEEcCCcccHHHhhhcCc
Q 004437 695 KHGGKVFSRAEPRHKQEIVRMLKE--MGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 695 ~~~~~v~~~~~p~~K~~~v~~l~~--~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
..++... ....+++++ .+..|.++|-. .....++.+|+
T Consensus 61 ---~~i~ts~-----~~~~~~l~~~~~~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 61 ---DEIITSG-----MAAAEYLKEHKGGKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp ---GGEEEHH-----HHHHHHHHHHTTSSEEEEES-H-HHHHHHHHTTE
T ss_pred ---CEEEChH-----HHHHHHHHhcCCCCEEEEEcCH-HHHHHHHHcCC
Confidence 1233221 233445554 37788888876 55666666553
|
... |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.61 E-value=0.39 Score=46.04 Aligned_cols=115 Identities=23% Similarity=0.291 Sum_probs=68.5
Q ss_pred CCCchhHHHHHHHHhCCC-eEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 625 PPRGGVDKAIDDCRGAGI-EVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi-~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
|+-|+..++|+.+++.|- .++|+|--|.--...+.+..|+..- ...+++....- .+.........+..+-+.+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~----F~~IfTNPa~~--da~G~L~v~pyH~~hsC~~ 157 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDL----FSEIFTNPACV--DASGRLLVRPYHTQHSCNL 157 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHH----HHHHhcCCccc--CCCCcEEeecCCCCCccCc
Confidence 577999999999999996 9999999998888888888887320 00011100000 0000000000000122222
Q ss_pred eCchh--HHHHHHHHHHc-------CCeEEEEcCCccc-HHHhhhcCceEecC
Q 004437 704 AEPRH--KQEIVRMLKEM-------GEVVAMTGDGVND-APALKLADIGVAMG 746 (753)
Q Consensus 704 ~~p~~--K~~~v~~l~~~-------~~~v~~~GDg~ND-~~~l~~A~vgiamg 746 (753)
.|.. |..++..++.. .+++.++|||.|| +|+++...--+||-
T Consensus 158 -CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 158 -CPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred -CchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 3332 67776665543 2378999999999 67777776666664
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=93.60 E-value=0.3 Score=45.74 Aligned_cols=87 Identities=15% Similarity=0.158 Sum_probs=66.9
Q ss_pred ccCCCCchhHHHHHHHHhCCC--eEEEEcCC-------ChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHH
Q 004437 622 LRDPPRGGVDKAIDDCRGAGI--EVMVITGD-------NKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEA 692 (753)
Q Consensus 622 ~~d~~r~~~~~~i~~l~~~gi--~v~i~TGd-------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (753)
=++.+.++..+.+++|++.+. +|+++|-- ....|..+++.+|+.
T Consensus 56 ~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp--------------------------- 108 (168)
T PF09419_consen 56 YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP--------------------------- 108 (168)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc---------------------------
Confidence 356788999999999999986 59999986 478899999999983
Q ss_pred HHhcCCeEEEeeCchhHHHHHHHHHHc-----CCeEEEEcCCc-ccHHHhhhcC
Q 004437 693 LSKHGGKVFSRAEPRHKQEIVRMLKEM-----GEVVAMTGDGV-NDAPALKLAD 740 (753)
Q Consensus 693 ~~~~~~~v~~~~~p~~K~~~v~~l~~~-----~~~v~~~GDg~-ND~~~l~~A~ 740 (753)
...+....|.-..++++.++.+ .+.++|+||-. .|+-|=...+
T Consensus 109 -----vl~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G 157 (168)
T PF09419_consen 109 -----VLRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMG 157 (168)
T ss_pred -----EEEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccC
Confidence 1123335776667888888765 67899999975 6877655555
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.16 Score=49.66 Aligned_cols=90 Identities=14% Similarity=0.125 Sum_probs=57.0
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH-cCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ-IKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
++.+++.++++.|+++|+++.++|.-+.......... .++... .+..+.+.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~----------------------------fd~v~~s~ 135 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAA----------------------------ADHIYLSQ 135 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHh----------------------------cCEEEEec
Confidence 4689999999999999999999999876654332221 232110 00112222
Q ss_pred e----Cch--hHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 704 A----EPR--HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 704 ~----~p~--~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
. .|+ -=..+++.+.-....++++||...|+.+=+.||+-
T Consensus 136 ~~~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~ 180 (199)
T PRK09456 136 DLGMRKPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGIT 180 (199)
T ss_pred ccCCCCCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCE
Confidence 1 221 11233344433456799999999999999999984
|
|
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=93.49 E-value=0.13 Score=50.81 Aligned_cols=89 Identities=18% Similarity=0.109 Sum_probs=55.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHH--HHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEE
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKST--AEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS 702 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~--a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 702 (753)
++.+++.+.++.|+++|+++.++|...... ........++...- ..+++
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f-----------------------------d~v~~ 144 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF-----------------------------DAVVE 144 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC-----------------------------CEEEE
Confidence 578999999999999999999999875433 22222223331100 12222
Q ss_pred e-----eCchh--HHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 703 R-----AEPRH--KQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 703 ~-----~~p~~--K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
. ..|+- =..+++.+.-....+++|||...|+.+=+.||+-
T Consensus 145 s~~~~~~KP~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~ 191 (211)
T TIGR02247 145 SCLEGLRKPDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGIT 191 (211)
T ss_pred eeecCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCE
Confidence 1 12221 1223333333356799999999999999999973
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=93.16 E-value=0.24 Score=52.13 Aligned_cols=48 Identities=21% Similarity=0.299 Sum_probs=38.8
Q ss_pred EEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHH---HHcCCC
Q 004437 618 GVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAIC---RQIKLF 665 (753)
Q Consensus 618 G~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia---~~~gi~ 665 (753)
|++.-.+.+-+++.++|++|++.|++++++|++...+...++ +.+|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 444455667799999999999999999999999977766665 567774
|
|
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=93.03 E-value=1.7 Score=46.21 Aligned_cols=46 Identities=11% Similarity=0.095 Sum_probs=35.3
Q ss_pred CeEEEEEccccC--CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHH
Q 004437 613 DLVFVGVVGLRD--PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAIC 659 (753)
Q Consensus 613 ~l~~lG~i~~~d--~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia 659 (753)
|.+++-+..-.| .+.+++.++|++|. .|++++++|||.......+.
T Consensus 119 DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 119 DGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred CCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 344444333222 47899999999999 78999999999999988774
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=92.95 E-value=0.59 Score=43.10 Aligned_cols=103 Identities=20% Similarity=0.216 Sum_probs=68.7
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHH---HHHHHc-----CCCCCCCccccccccchhhhccCHHHHHHHHHh
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAE---AICRQI-----KLFSGNEDLTGRSFTGKEFMALSSTQQIEALSK 695 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~---~ia~~~-----gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (753)
|..++++.+..++.++.|++++-+|+|+.-.+. ....+. ++.... ++.. .+.+...+.
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gp------v~~s-------P~~l~~al~- 91 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGP------VLLS-------PDSLFSALH- 91 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCC------EEEC-------Ccchhhhhh-
Confidence 689999999999999999999999999965543 333333 332211 1111 001111111
Q ss_pred cCCeEEEeeCchhHHHHHHHHHHc-----CCeEEEEcCCcccHHHhhhcCce
Q 004437 696 HGGKVFSRAEPRHKQEIVRMLKEM-----GEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 696 ~~~~v~~~~~p~~K~~~v~~l~~~-----~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
..++.+-..+.|...++.++.. ...++++|...+|+.+.++++|-
T Consensus 92 --rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 92 --REVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred --ccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 1355555556788888888764 44678899999999998877763
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.12 E-value=0.68 Score=43.97 Aligned_cols=52 Identities=15% Similarity=0.273 Sum_probs=43.3
Q ss_pred EEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHH---HHcCCCC
Q 004437 615 VFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAIC---RQIKLFS 666 (753)
Q Consensus 615 ~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia---~~~gi~~ 666 (753)
.+-|.+.++|..-|++.+|+++|++++.+|..+|--..++-+.+. +.||+.-
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v 67 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDV 67 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCc
Confidence 467999999999999999999999999999999988777665554 4566643
|
|
| >TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase | Back alignment and domain information |
|---|
Probab=91.99 E-value=0.52 Score=45.27 Aligned_cols=87 Identities=11% Similarity=0.114 Sum_probs=61.0
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe-
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 703 (753)
++.+++.+++++|+ .+++++|.-+...+..+.+.+|+...- ..+++.
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~f-----------------------------d~i~~~~ 131 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCF-----------------------------DGIFCFD 131 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhh-----------------------------CeEEEee
Confidence 36789999999997 478999999998899999999984311 112221
Q ss_pred --------eCchh--HHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceE
Q 004437 704 --------AEPRH--KQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 704 --------~~p~~--K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
..|.. =..+++.+......+++|||...|+.+=+.||+-.
T Consensus 132 ~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 132 TANPDYLLPKPSPQAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred cccCccCCCCCCHHHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 12321 13334444444678999999999999988888754
|
These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509). |
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=91.84 E-value=0.66 Score=45.15 Aligned_cols=92 Identities=14% Similarity=0.133 Sum_probs=54.7
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.+++++|++.+ +.+++|..+........+.+++......... ..+.++.
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~------------------------~i~~~~~ 128 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFS------------------------EVLMCGH 128 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCccc------------------------EEEEecc
Confidence 36799999999999985 5666676555444445566666321100000 1122222
Q ss_pred CchhHHHHHH-HHHHcC-CeEEEEcCCcccHHHhhhc--Cce
Q 004437 705 EPRHKQEIVR-MLKEMG-EVVAMTGDGVNDAPALKLA--DIG 742 (753)
Q Consensus 705 ~p~~K~~~v~-~l~~~~-~~v~~~GDg~ND~~~l~~A--~vg 742 (753)
... |-.++. .+++.| +.+++|||..+|+.+-++| |+-
T Consensus 129 ~~~-kp~~~~~a~~~~~~~~~v~vgDs~~di~aA~~a~~Gi~ 169 (197)
T PHA02597 129 DES-KEKLFIKAKEKYGDRVVCFVDDLAHNLDAAHEALSQLP 169 (197)
T ss_pred Ccc-cHHHHHHHHHHhCCCcEEEeCCCHHHHHHHHHHHcCCc
Confidence 221 333333 333333 4688999999999999999 873
|
2 hypothetical protein; Provisional |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=91.77 E-value=0.43 Score=58.76 Aligned_cols=93 Identities=15% Similarity=0.185 Sum_probs=64.4
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 705 (753)
+.+++.+.++.|+++|+++.++|+.....+....+.+|+.... ...++.+++. .+..
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~---Fd~iv~~~~~--------------------~~~K 218 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSM---FDAIVSADAF--------------------ENLK 218 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhH---CCEEEECccc--------------------ccCC
Confidence 5689999999999999999999999999988888889884110 0011111110 1112
Q ss_pred ch--hHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc
Q 004437 706 PR--HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 706 p~--~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
|+ -=...++.+.-..+.+++|||..+|+.+-+.|++
T Consensus 219 P~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm 256 (1057)
T PLN02919 219 PAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGM 256 (1057)
T ss_pred CCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCC
Confidence 22 1133344444445789999999999999999997
|
|
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=91.73 E-value=0.39 Score=47.93 Aligned_cols=81 Identities=22% Similarity=0.324 Sum_probs=56.0
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChH---HHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEE
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKS---TAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 701 (753)
+.-|++.+.++.+++.|++|+++|||+.. .+..-.++.|+... ..++
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~------------------------------~~l~ 164 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGW------------------------------DHLI 164 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTB------------------------------SCGE
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCcc------------------------------chhc
Confidence 44478999999999999999999999765 23334566675321 1223
Q ss_pred EeeCc--------hhHHHHHHHHHHcCC-eEEEEcCCcccHHH
Q 004437 702 SRAEP--------RHKQEIVRMLKEMGE-VVAMTGDGVNDAPA 735 (753)
Q Consensus 702 ~~~~p--------~~K~~~v~~l~~~~~-~v~~~GDg~ND~~~ 735 (753)
.|... +-|..--+.+.+.|+ .++.+||..+|..-
T Consensus 165 lr~~~~~~~~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 165 LRPDKDPSKKSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp EEEESSTSS------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred cccccccccccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 33222 237777788888865 56779999999875
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=91.41 E-value=0.34 Score=49.06 Aligned_cols=46 Identities=26% Similarity=0.270 Sum_probs=36.3
Q ss_pred EEeeCchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhc--------CceEecC
Q 004437 701 FSRAEPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLA--------DIGVAMG 746 (753)
Q Consensus 701 ~~~~~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A--------~vgiamg 746 (753)
-.+-.+.+|...++.+.+. ...++++||+.||.+|++.+ ..||+|+
T Consensus 160 e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 160 ELKPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG 217 (244)
T ss_pred EEeeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe
Confidence 3344566898888877655 35799999999999999999 5788884
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.34 E-value=0.34 Score=48.18 Aligned_cols=94 Identities=14% Similarity=0.159 Sum_probs=60.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.++++.| ++++.++|+.....+....+..|+...-. ..+++++... +.
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~---~~v~~~~~~~--------------------~~ 141 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFP---DKLFSGYDIQ--------------------RW 141 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCc---ceEeeHHhcC--------------------CC
Confidence 4568999999988 48999999998888888888888743210 0011111110 11
Q ss_pred Cc--hhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEe
Q 004437 705 EP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA 744 (753)
Q Consensus 705 ~p--~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 744 (753)
.| +-=..+.+.+.-..+.+++|||+.+|+.+=+.||+.+.
T Consensus 142 KP~p~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 142 KPDPALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred CCChHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 12 11123333333334679999999999999999998664
|
|
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=91.01 E-value=1.3 Score=44.67 Aligned_cols=81 Identities=20% Similarity=0.240 Sum_probs=52.7
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHH---HHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCe
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTA---EAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGK 699 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a---~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (753)
+.|.-|++.+..+.+++.|++|+++|||....- ..=.++.|+... ..
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL~kaGy~~~------------------------------~~ 192 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANLKKAGYHTW------------------------------EK 192 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHHcCCCCc------------------------------ce
Confidence 445668999999999999999999999985422 222344566421 23
Q ss_pred EEEeeCc--------hhHHHHHHHHHHcCC-eEEEEcCCcccH
Q 004437 700 VFSRAEP--------RHKQEIVRMLKEMGE-VVAMTGDGVNDA 733 (753)
Q Consensus 700 v~~~~~p--------~~K~~~v~~l~~~~~-~v~~~GDg~ND~ 733 (753)
++.|... +.|...-+.+.+.|+ +++.+||..+|.
T Consensus 193 LiLR~~~D~~~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 193 LILKDPQDNSAENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred eeecCCCCCccchhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 4445322 124343444455655 567899999997
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=90.47 E-value=0.52 Score=45.41 Aligned_cols=90 Identities=13% Similarity=0.132 Sum_probs=57.5
Q ss_pred hHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhH
Q 004437 630 VDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHK 709 (753)
Q Consensus 630 ~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K 709 (753)
..+.+..|++. ++..++|+.....+....+.+|+...-. .+++.++.. ...-.|+-=
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd----~i~~~~~~~------------------~~KP~p~~~ 148 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFD----AVVAADDVQ------------------HHKPAPDTF 148 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHce----EEEehhhcc------------------CCCCChHHH
Confidence 35889999865 8999999999999999999999853111 111111100 000111112
Q ss_pred HHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 710 QEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 710 ~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
...++.++-....+++|||..+|+.+=+.||+-
T Consensus 149 ~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~ 181 (188)
T PRK10725 149 LRCAQLMGVQPTQCVVFEDADFGIQAARAAGMD 181 (188)
T ss_pred HHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCE
Confidence 333334433345799999999999999999974
|
|
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=90.41 E-value=1.3 Score=39.40 Aligned_cols=72 Identities=17% Similarity=0.135 Sum_probs=48.3
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHH---------------HHHHHcCCCCC------------CCccccccc
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAE---------------AICRQIKLFSG------------NEDLTGRSF 676 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~---------------~ia~~~gi~~~------------~~~~~~~~~ 676 (753)
+++.+++.++++++++.|++++++|||+..... ....+-++... .-++....+
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ipYd~l~~~kp~~~~~~~~~dD~~i 102 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVPYDEIYVGKPWCGHDGFYVDDRAI 102 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCCCceEEeCCCcCCCCCceecchhh
Confidence 668899999999999999999999999876533 33334444321 112334455
Q ss_pred cchhhhccCHHHHHHHHHh
Q 004437 677 TGKEFMALSSTQQIEALSK 695 (753)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~~ 695 (753)
.-++|..++.++...++..
T Consensus 103 r~~~~~~~~~~~~~~~~~~ 121 (126)
T TIGR01689 103 RPSEFSSLTYDEINTLTKI 121 (126)
T ss_pred CHHHHHhcCHHHHHHHHhh
Confidence 6666667776666665543
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=90.30 E-value=1.5 Score=44.58 Aligned_cols=49 Identities=6% Similarity=0.108 Sum_probs=39.6
Q ss_pred EEccccCCCCchhHHHHHHHHhCCCeEEEEcC---CChHHHHHHHHHcCCCC
Q 004437 618 GVVGLRDPPRGGVDKAIDDCRGAGIEVMVITG---DNKSTAEAICRQIKLFS 666 (753)
Q Consensus 618 G~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TG---d~~~~a~~ia~~~gi~~ 666 (753)
|.+.-.+.+-+++.++|++|+++|++++++|| +.........+.+|+..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~ 61 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPA 61 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 33344556667999999999999999999996 77888888888899853
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=89.90 E-value=0.28 Score=49.65 Aligned_cols=39 Identities=23% Similarity=0.291 Sum_probs=33.8
Q ss_pred hhHHHHHHHHHHcCCeEEEEcC----CcccHHHhhh-cCceEecC
Q 004437 707 RHKQEIVRMLKEMGEVVAMTGD----GVNDAPALKL-ADIGVAMG 746 (753)
Q Consensus 707 ~~K~~~v~~l~~~~~~v~~~GD----g~ND~~~l~~-A~vgiamg 746 (753)
-+|...++.|+ ....|++||| |.||.+||+. -=.|+++.
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 36999999999 7889999999 8999999997 44588775
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=89.47 E-value=0.63 Score=46.26 Aligned_cols=98 Identities=18% Similarity=0.186 Sum_probs=70.7
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
.++.+++.+.+..|++.|+.+.+.|+-....+..+.+.+|+...-. ..+++++.. -..
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~----~~v~~~dv~------------------~~K 142 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFD----VIVTADDVA------------------RGK 142 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcc----hhccHHHHh------------------cCC
Confidence 4688999999999999999999999999999999999999864221 122222111 112
Q ss_pred eCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceE
Q 004437 704 AEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 704 ~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
-.|+-=....+.|.-....+++|.|+.+.+.+-++|+.-+
T Consensus 143 P~Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 143 PAPDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred CCCHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 2344334455555445678999999999999999998643
|
|
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=88.12 E-value=2.6 Score=47.17 Aligned_cols=97 Identities=14% Similarity=0.063 Sum_probs=60.9
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH-cCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe-
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ-IKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 703 (753)
+++++.+ .++++|.+ +++|+-...-+..+|++ +|++.-. |.+++.. .+..+-.+
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VI---------gTeLev~-----------~~G~~TG~i 166 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADKVL---------GTELEVS-----------KSGRATGFM 166 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEE---------ecccEEC-----------cCCEEeeee
Confidence 5666554 44567754 99999999999999987 8986310 0000000 00111122
Q ss_pred -----eCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 704 -----AEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 704 -----~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
+.-++|..-++..........+.||+.||.|||+.|+-+.+++
T Consensus 167 ~g~~~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~ 214 (497)
T PLN02177 167 KKPGVLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVP 214 (497)
T ss_pred cCCCCCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeC
Confidence 1235577766643221122379999999999999999999887
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=86.30 E-value=1 Score=45.95 Aligned_cols=48 Identities=23% Similarity=0.348 Sum_probs=37.4
Q ss_pred EEccccCC----CCchhHHHHHHHHhCCCeEEEEcCCChHH---HHHHHHHcCCC
Q 004437 618 GVVGLRDP----PRGGVDKAIDDCRGAGIEVMVITGDNKST---AEAICRQIKLF 665 (753)
Q Consensus 618 G~i~~~d~----~r~~~~~~i~~l~~~gi~v~i~TGd~~~~---a~~ia~~~gi~ 665 (753)
|.+.-.+. +-|++.++|++|+++|++++++||++..+ .....+++|+.
T Consensus 10 Gtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 10 GVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred CeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 34444455 78899999999999999999999987765 44556667875
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=85.63 E-value=1.5 Score=44.84 Aligned_cols=41 Identities=12% Similarity=0.186 Sum_probs=38.2
Q ss_pred CC-chhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 626 PR-GGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 626 ~r-~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
+| |++.+++++|+++|++++++|+.....+....+.+|+..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~ 187 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDR 187 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCc
Confidence 56 999999999999999999999999999999999999974
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=85.28 E-value=2.6 Score=43.54 Aligned_cols=47 Identities=15% Similarity=0.210 Sum_probs=35.2
Q ss_pred EccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHH---HHHHcCCC
Q 004437 619 VVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEA---ICRQIKLF 665 (753)
Q Consensus 619 ~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~---ia~~~gi~ 665 (753)
++.-.+.+-+++.++|++|+++|++++++|++...+... -.+.+|+.
T Consensus 12 tl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 12 VLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred ceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 334456677889999999999999999999987544333 34567774
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=84.39 E-value=1 Score=45.60 Aligned_cols=48 Identities=13% Similarity=0.204 Sum_probs=40.2
Q ss_pred EEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH---cCCC
Q 004437 618 GVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ---IKLF 665 (753)
Q Consensus 618 G~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~---~gi~ 665 (753)
|.+.-.+.+-|++.++|++|+++|++++++|++...+...++++ +|+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 55555677889999999999999999999999999887777666 4663
|
|
| >COG3700 AphA Acid phosphatase (class B) [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.54 E-value=2.7 Score=38.88 Aligned_cols=88 Identities=19% Similarity=0.339 Sum_probs=61.3
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChH----HHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEE
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKS----TAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~----~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 701 (753)
+++=+++.|..-++.|=+++++|||... ++..+|+...|.... ..+|
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~-----------------------------pv~f 165 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMN-----------------------------PVIF 165 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCc-----------------------------ceee
Confidence 5666788888888999999999999764 345667777764322 4566
Q ss_pred EeeCch-hHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc-eE
Q 004437 702 SRAEPR-HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI-GV 743 (753)
Q Consensus 702 ~~~~p~-~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v-gi 743 (753)
+...|. .+..-..++++.+ .-..-||+-||+.|-+.|++ ||
T Consensus 166 ~Gdk~k~~qy~Kt~~i~~~~-~~IhYGDSD~Di~AAkeaG~RgI 208 (237)
T COG3700 166 AGDKPKPGQYTKTQWIQDKN-IRIHYGDSDNDITAAKEAGARGI 208 (237)
T ss_pred ccCCCCcccccccHHHHhcC-ceEEecCCchhhhHHHhcCccce
Confidence 665551 1223344555554 44678999999999999986 54
|
|
| >TIGR02251 HIF-SF_euk Dullard-like phosphatase domain | Back alignment and domain information |
|---|
Probab=82.32 E-value=1 Score=42.25 Aligned_cols=93 Identities=12% Similarity=0.039 Sum_probs=61.3
Q ss_pred ccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEE
Q 004437 622 LRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 622 ~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 701 (753)
+.=..||++.+.++.|.+. +.+++.|-.....|..+.+.++..... + ..++
T Consensus 39 ~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~--f--------------------------~~~l 89 (162)
T TIGR02251 39 VYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKV--I--------------------------SRRL 89 (162)
T ss_pred EEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCE--E--------------------------eEEE
Confidence 3345899999999999988 999999999999999999988863210 0 0122
Q ss_pred Eee-CchhHHHHHHHHH---HcCCeEEEEcCCcccHHHhhhcCceE
Q 004437 702 SRA-EPRHKQEIVRMLK---EMGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 702 ~~~-~p~~K~~~v~~l~---~~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
+|- ....|..+++.|. .....|+++||...|..+=+.+++=|
T Consensus 90 ~r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i 135 (162)
T TIGR02251 90 YRESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPI 135 (162)
T ss_pred EccccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeec
Confidence 221 1101111333333 33467999999999887655555433
|
This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031. |
| >PRK10748 flavin mononucleotide phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=82.06 E-value=2.4 Score=42.69 Aligned_cols=86 Identities=12% Similarity=0.024 Sum_probs=52.7
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe-
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 703 (753)
++-+++.++++.|++. +++.++|..+.. .+..|+...-. ..+.+.
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd----------------------------~i~~~~~ 158 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFE----------------------------FVLRAGP 158 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhc----------------------------eeEeccc
Confidence 4668999999999975 889999886643 24455521100 112121
Q ss_pred ---eCchhH--HHHHHHHHHcCCeEEEEcCC-cccHHHhhhcCceEe
Q 004437 704 ---AEPRHK--QEIVRMLKEMGEVVAMTGDG-VNDAPALKLADIGVA 744 (753)
Q Consensus 704 ---~~p~~K--~~~v~~l~~~~~~v~~~GDg-~ND~~~l~~A~vgia 744 (753)
..|.-. ...++.+.-....++||||. ..|+.+=+.||+-.+
T Consensus 159 ~~~~KP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i 205 (238)
T PRK10748 159 HGRSKPFSDMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQAC 205 (238)
T ss_pred CCcCCCcHHHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEE
Confidence 122211 12223333235679999999 599999999987544
|
|
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=81.98 E-value=11 Score=35.83 Aligned_cols=98 Identities=24% Similarity=0.310 Sum_probs=60.4
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHH----hcCCeEE
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALS----KHGGKVF 701 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~ 701 (753)
+.+++.+|+.+|+++|++++|+|--. ||.. ..+++..|.....- ....+. +.+...+
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQs-----------Gi~r-------gyf~~~~f~~~~~~-m~~~l~~~gv~id~i~~ 92 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQS-----------GIGR-------GYFTEADFDKLHNK-MLKILASQGVKIDGILY 92 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCC-----------Cccc-------cCccHHHHHHHHHH-HHHHHHHcCCccceEEE
Confidence 56899999999999999999999643 2211 11222222222111 111111 1123455
Q ss_pred EeeCchh--------HHHHHHHHHHcC---CeEEEEcCCcccHHHhhhcCce
Q 004437 702 SRAEPRH--------KQEIVRMLKEMG---EVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 702 ~~~~p~~--------K~~~v~~l~~~~---~~v~~~GDg~ND~~~l~~A~vg 742 (753)
|.-.|++ ...+.+.+++.+ ....+|||...|+.+=..|+++
T Consensus 93 Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 93 CPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred CCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC
Confidence 5555553 356666777664 6789999999999987777664
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=80.76 E-value=3 Score=42.65 Aligned_cols=41 Identities=17% Similarity=0.165 Sum_probs=37.2
Q ss_pred CC-chhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 626 PR-GGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 626 ~r-~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
+| |++.+++++|+++|+++.++|+.+...+....+.+|+..
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~ 189 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEG 189 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCc
Confidence 45 999999999999999999999888888899999999964
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 753 | ||||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 1e-154 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 1e-152 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 1e-152 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 1e-151 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 6e-72 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 4e-70 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 1e-69 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 7e-69 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-32 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 1e-15 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 9e-25 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 4e-15 | ||
| 3rfu_A | 736 | Crystal Structure Of A Copper-Transporting Pib-Type | 9e-13 | ||
| 2voy_H | 48 | Cryoem Model Of Copa, The Copper Transporting Atpas | 4e-11 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 5e-10 | ||
| 3j08_A | 645 | High Resolution Helical Reconstruction Of The Bacte | 1e-09 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 6e-10 | ||
| 3j09_A | 723 | High Resolution Helical Reconstruction Of The Bacte | 1e-09 | ||
| 2voy_B | 42 | Cryoem Model Of Copa, The Copper Transporting Atpas | 9e-10 | ||
| 2b8e_A | 273 | Copa Atp Binding Domain Length = 273 | 2e-09 | ||
| 3a1c_A | 287 | Crystal Structure Of The P- And N-Domains Of Copa, | 3e-09 | ||
| 3a1e_A | 287 | Crystal Structure Of The P- And N-Domains Of His462 | 4e-09 | ||
| 2voy_I | 128 | Cryoem Model Of Copa, The Copper Transporting Atpas | 3e-08 | ||
| 3skx_A | 280 | Crystal Structure Of The Atp Binding Domain Of Arch | 1e-07 | ||
| 3sky_A | 274 | 2.1a Crystal Structure Of The Phosphate Bound Atp B | 2e-07 | ||
| 3gwi_A | 170 | Crystal Structure Of Mg-Atpase Nucleotide Binding D | 6e-06 | ||
| 2voy_G | 36 | Cryoem Model Of Copa, The Copper Transporting Atpas | 6e-05 | ||
| 1q3i_A | 214 | Crystal Structure Of Na,K-Atpase N-Domain Length = | 7e-04 |
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|3RFU|A Chain A, Crystal Structure Of A Copper-Transporting Pib-Type Atpase Length = 736 | Back alignment and structure |
|
| >pdb|2VOY|H Chain H, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 48 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J08|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 645 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|3J09|A Chain A, High Resolution Helical Reconstruction Of The Bacterial P-Type Atpase Copper Transporter Copa Length = 723 | Back alignment and structure |
|
| >pdb|2VOY|B Chain B, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 42 | Back alignment and structure |
|
| >pdb|2B8E|A Chain A, Copa Atp Binding Domain Length = 273 | Back alignment and structure |
|
| >pdb|3A1C|A Chain A, Crystal Structure Of The P- And N-Domains Of Copa, A Copper- Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|3A1E|A Chain A, Crystal Structure Of The P- And N-Domains Of His462gln Mutant Copa, A Copper-Transporting P-Type Atpase, Bound With Amppcp-Mg Length = 287 | Back alignment and structure |
|
| >pdb|2VOY|I Chain I, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 128 | Back alignment and structure |
|
| >pdb|3SKX|A Chain A, Crystal Structure Of The Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 280 | Back alignment and structure |
|
| >pdb|3SKY|A Chain A, 2.1a Crystal Structure Of The Phosphate Bound Atp Binding Domain Of Archaeoglobus Fulgidus Copb Length = 274 | Back alignment and structure |
|
| >pdb|3GWI|A Chain A, Crystal Structure Of Mg-Atpase Nucleotide Binding Domain Length = 170 | Back alignment and structure |
|
| >pdb|2VOY|G Chain G, Cryoem Model Of Copa, The Copper Transporting Atpase From Archaeoglobus Fulgidus Length = 36 | Back alignment and structure |
|
| >pdb|1Q3I|A Chain A, Crystal Structure Of Na,K-Atpase N-Domain Length = 214 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 753 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 0.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 0.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 0.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 0.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 0.0 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 7e-30 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 8e-27 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 2e-25 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 5e-25 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 1e-09 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 7e-24 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 7e-23 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 2e-11 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 3e-22 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-13 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-08 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 1e-06 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 2e-06 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 2e-04 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 3e-04 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 6e-04 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 6e-04 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 8e-04 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 957 bits (2477), Expect = 0.0
Identities = 348/770 (45%), Positives = 467/770 (60%), Gaps = 62/770 (8%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
ME A S + E+CL + V GL+ +V++ E+YG NEL E+GK LW+LV+EQ
Sbjct: 2 MEA----AHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQ 57
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
F+D LV+ILL+AA ISF+LA+F + G+ +VEP VI+LIL+ NAIVGVWQE NAE
Sbjct: 58 FEDLLVRILLLAACISFVLAWF---EEGEETITAFVEPFVILLILIANAIVGVWQERNAE 114
Query: 121 KALEALKKIQCESGKVLRDG-YLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSL 179
A+EALK+ + E GKV R V + A +VPGDIVE+ VGDKVPAD+R+ ++K+++L
Sbjct: 115 NAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTL 174
Query: 180 RVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIG 239
RV+QS LTGE++ ++K T PV Q K+NM+F+GT + G + IV TG++TEIG
Sbjct: 175 RVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIG 234
Query: 240 KIQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPAN 299
KI+ Q+ E+ TPL++KLDEFG +L+ I L+C+ VW++N +F W
Sbjct: 235 KIRDQMAAT--EQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSW--- 289
Query: 300 VQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGC 359
YYFKIAVALAVAAIPEGLPAVITTCLALGTR+MA+KNAIVR LPSVETLGC
Sbjct: 290 ----IRGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGC 345
Query: 360 TTVICSDKTGTLTTNQMSVTEFFTLGR---KTTISRIFHVEGTTYDPK-----DGGIVDW 411
T+VICSDKTGTLTTNQMSV + F + + F + G+TY P+ + +
Sbjct: 346 TSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIR- 404
Query: 412 PCYNMDANLQAMAKICAVCNDAGVYCDG--PLFRATGLPTEAALKVLVEKMGFPDVKGRN 469
L +A ICA+CND+ + + ++ G TE AL LVEKM + + RN
Sbjct: 405 --SGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRN 462
Query: 470 KISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGH----- 524
+ A C + K+ TLEF R RKSMSV
Sbjct: 463 LSKVERANA------------CNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVG 510
Query: 525 NQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLS--RHLEMSSKGLRCLGMAYKD 582
N++ VKG+ E +++R ++V + VP+ P + +LS + LRCL +A +D
Sbjct: 511 NKMFVKGAPEGVIDRCNYV-RVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRD 569
Query: 583 ELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGI 642
+ L D S + E+DL FVGVVG+ DPPR V +I CR AGI
Sbjct: 570 ---------TPPKREEMVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGI 620
Query: 643 EVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS 702
V++ITGDNK TA AICR+I +F NE++ R++TG+EF L +Q EA + F+
Sbjct: 621 RVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRR--ACCFA 678
Query: 703 RAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
R EP HK +IV L+ E+ AMTGDGVNDAPALK A+IG+AMG +GT V
Sbjct: 679 RVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAV 727
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 755 bits (1952), Expect = 0.0
Identities = 214/779 (27%), Positives = 342/779 (43%), Gaps = 102/779 (13%)
Query: 2 EEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQF 61
+E +V + ++Y KGLS+ + R G N L +G P + Q
Sbjct: 47 KEMEINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQL 106
Query: 62 DDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEK 121
L ++ VAA I I +S+ + ++ L ++ ++V+ G +QE +
Sbjct: 107 AGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTN 166
Query: 122 ALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRV 181
+ + K + + V+RDG + A LV GD+VE+ GD+VPAD+R+ L+ +V
Sbjct: 167 IIASFKNLVPQQATVIRDGDKF-QINADQLVVGDLVEMKGGDRVPADIRI--LQAQGRKV 223
Query: 182 EQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKI 241
+ SSLTGE+ P + SP + L+ + N+ F T + G+ +V+NTG T IG+I
Sbjct: 224 DNSSLTGESEPQTR--SPECTHESPLETR-NIAFFSTMCLEGTAQGLVVNTGDRTIIGRI 280
Query: 242 QKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQ 301
+ +E TP+ +++ F + + L +I+ + + +
Sbjct: 281 ASLA--SGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAM--CIGYTFLRA------ 330
Query: 302 FSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTT 361
+A+ VA +PEGL A +T CL+L +++A KN +V+ L +VETLG T+
Sbjct: 331 ---------MVFFMAIVVAYVPEGLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTS 381
Query: 362 VICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQ 421
VICSDKTGTLT N+M+V+ + + G T+D +
Sbjct: 382 VICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSGQTFDQSS------------ETWR 429
Query: 422 AMAKICAVCNDAGVYCDGPLF-----RATGLPTEAALKVLVEKMGFPDVKGRNKISDTQL 476
A+ ++ +CN A G +E AL E
Sbjct: 430 ALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTL--------------- 474
Query: 477 AANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQ---LLVKGSV 533
++ R +R +V + F+ K I + L++KG+
Sbjct: 475 -----GNAMGYR--------ERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAP 521
Query: 534 ESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSE 593
E +LER S + L G +PLDE + + +L + G R LG SE
Sbjct: 522 ERVLERCSSI-LIKGQELPLDEQWREAFQTAYLSLGGLGERVLGFCQLY--------LSE 572
Query: 594 SHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKS 653
D + S L F G+V + DPPR V A+ CR AGI V+++TGD+
Sbjct: 573 KDYPPGYAFDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVLKCRTAGIRVIMVTGDHPI 632
Query: 654 TAEAICRQIKLFSGN--------------------EDLTGRSFTGKEFMALSSTQQIEAL 693
TA+AI + + S +D G + + ++ +EAL
Sbjct: 633 TAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEAL 692
Query: 694 SKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
H VF+R P+ K IV + +G +VA+TGDGVND+PALK ADIGVAMGI G++
Sbjct: 693 RTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDA 751
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 726 bits (1877), Expect = 0.0
Identities = 205/771 (26%), Positives = 346/771 (44%), Gaps = 102/771 (13%)
Query: 10 SWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKIL 69
++++ +Y L +GL++ ++ R G N L P W Q +L
Sbjct: 50 KLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILL 109
Query: 70 LVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKI 129
+ A + F+ ++ + ++ +V+ ++++ +QE+ + + +++ K +
Sbjct: 110 WIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNM 169
Query: 130 QCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGE 189
+ V+RDG + A +V GD+VE+ GD++PAD+R+ + +V+ SSLTGE
Sbjct: 170 VPQQALVIRDGEKS-TINAEFVVAGDLVEVKGGDRIPADLRI--ISAHGCKVDNSSLTGE 226
Query: 190 AMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDAS 249
+ P + SP F + L+ + N+ F T V G+ +V+ TG T +G+I +
Sbjct: 227 SEPQTR--SPEFSSENPLETR-NIAFFSTNCVEGTARGVVVYTGDRTVMGRIATLA--SG 281
Query: 250 LEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTY 309
LE TP+ +++ F + +T + + +I++ L + ++
Sbjct: 282 LEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSL--ILGYSWLEA-------------- 325
Query: 310 YFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTG 369
+ + VA +PEGL A +T CL L ++MA+KN +V+ L +VETLG T+ ICSDKTG
Sbjct: 326 -VIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTG 384
Query: 370 TLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAV 429
TLT N+M+V + + I + T G D A A+++I A+
Sbjct: 385 TLTQNRMTVAHMWFDNQ------IHEADTTENQS--GAAFDKT----SATWSALSRIAAL 432
Query: 430 CNDAGVYCDGPLF-----RATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDS 484
CN A G +E+AL +E
Sbjct: 433 CNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCC--------------------GSV 472
Query: 485 STVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQ---LLVKGSVESLLERSS 541
+R R+ ++ + F+ K I L++KG+ E +L+R S
Sbjct: 473 QGMR--------DRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCS 524
Query: 542 HVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKL 601
+ L +G+ PL E + + +LE+ G R LG + E
Sbjct: 525 TI-LLNGAEEPLKEDMKEAFQNAYLELGGLGERVLGFCHFA--------LPEDKYNEGYP 575
Query: 602 LDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ 661
D + +DL FVG++ + DPPR V A+ CR AGI+V+++TGD+ TA+AI +
Sbjct: 576 FDADEPNFPTTDLCFVGLMAMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG 635
Query: 662 IKLFSGN--------------------EDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701
+ + S D G + LS+ + L H VF
Sbjct: 636 VGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDILHYHTEIVF 695
Query: 702 SRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
+R P+ K IV + G +VA+TGDGVND+PALK ADIGVAMGI+G++V
Sbjct: 696 ARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDV 746
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 576 bits (1487), Expect = 0.0
Identities = 176/753 (23%), Positives = 304/753 (40%), Gaps = 149/753 (19%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
++ + +E+ ++ + GL+++E E R + +G N+L +EK + L
Sbjct: 7 IKNETVDLEKIPIEEVFQQLKCSRE-GLTTQEGEDRIQIFGPNKL-EEKKESKLLKFLGF 64
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
+ L ++ +AA ++ LA D+ + + I+ +LV+N+ + +E+NA
Sbjct: 65 MWNPLSWVMEMAAIMAIALANGDGRP------PDWQDFVGIICLLVINSTISFIEENNAG 118
Query: 121 KALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLR 180
A AL KVLRDG + A LVPGDIV + +GD +PAD R+ L+ L+
Sbjct: 119 NAAAALMAGLAPKTKVLRDGKWS-EQEAAILVPGDIVSIKLGDIIPADARL--LEGDPLK 175
Query: 181 VEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGK 240
V+QS+LTGE++P+ K VF+G+T G +VI TG++T GK
Sbjct: 176 VDQSALTGESLPVTKHP-------------GQEVFSGSTCKQGEIEAVVIATGVHTFFGK 222
Query: 241 IQKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWI-MNYRNFLSWDVVDGWPAN 299
+ +K L GN +I + ++ I M DG
Sbjct: 223 AAHLVDST---NQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYP--IQRRKYRDG---- 273
Query: 300 VQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGC 359
+ L + IP +P V++ +A+G+ +++Q+ AI +++ ++E +
Sbjct: 274 -----------IDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAG 322
Query: 360 TTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDAN 419
V+CSDKTGTLT N++SV + V +
Sbjct: 323 MDVLCSDKTGTLTLNKLSVDKNLV-----------EVFCKGVEKDQ-------------- 357
Query: 420 LQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAAN 479
+ A+ + +AA+ ++ + A
Sbjct: 358 ---VLLFAAMASRV----------ENQDAIDAAMVGMLADPK-------------EARAG 391
Query: 480 YLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLER 539
+ V L F+ + K ++ + +G+ + KG+ E +LE
Sbjct: 392 I-------------------REVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILEL 432
Query: 540 SSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHK 599
+ +LS + + +GLR L +A +
Sbjct: 433 -----------AKASNDLSKKVLSIIDKYAERGLRSLAVARQV----------------- 464
Query: 600 KLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAIC 659
+ + + FVG++ L DPPR + I G+ V +ITGD + +
Sbjct: 465 --VPEKTKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETG 522
Query: 660 RQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEM 719
R++ + N + + L+S E + K F+ P HK EIV+ L+E
Sbjct: 523 RRLGM-GTNMYPSSALLGTHKDANLASIPVEELIEKAD--GFAGVFPEHKYEIVKKLQER 579
Query: 720 GEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
+V MTGDGVNDAPALK ADIG+A+ T+
Sbjct: 580 KHIVGMTGDGVNDAPALKKADIGIAVA-DATDA 611
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 570 bits (1471), Expect = 0.0
Identities = 185/753 (24%), Positives = 309/753 (41%), Gaps = 162/753 (21%)
Query: 2 EEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQF 61
EE E L+ GL+S EV +RR +YG N++ +EK + + L F
Sbjct: 65 EEATPGGGRVVPEDMLQ---TDTRVGLTSEEVVQRRRKYGLNQMKEEK-ENHFLKFLGFF 120
Query: 62 DDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEK 121
+ ++ AA ++ L ED+V+ VI +L+LNA+VG QE A
Sbjct: 121 VGPIQFVMEGAAVLAAGL-------------EDWVDFGVICGLLLLNAVVGFVQEFQAGS 167
Query: 122 ALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRV 181
++ LKK VLRDG L ++ A +VPGDI+++ G +PAD R+ + L+V
Sbjct: 168 IVDELKKTLALKAVVLRDGTLK-EIEAPEVVPGDILQVEEGTIIPADGRIVT-DDAFLQV 225
Query: 182 EQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKI 241
+QS+LTGE++ + K + VFA + V G ++ TG NT +G+
Sbjct: 226 DQSALTGESLAVDKHK-------------GDQVFASSAVKRGEAFVVITATGDNTFVGRA 272
Query: 242 QKQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQ 301
++ A + L+ G L + L+VW+ ++ + S +V
Sbjct: 273 AALVNAA--SGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSF--YRSNPIVQI------ 322
Query: 302 FSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTT 361
+ +A+ + +P GLPAV+TT +A+G +A+K AIV+KL ++E+L
Sbjct: 323 ---------LEFTLAITIIGVPVGLPAVVTTTMAVGAAYLAKKKAIVQKLSAIESLAGVE 373
Query: 362 VICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQ 421
++CSDKTGTLT N++S+ + +T V G DP+D
Sbjct: 374 ILCSDKTGTLTKNKLSLHDPYT------------VAG--VDPED---------------- 403
Query: 422 AMAKICAVCNDAGVYCDGPLFRATGL--PTEAALKVLVEKMGFPDVKGRNKISDTQLAAN 479
+ + R + A ++ + +
Sbjct: 404 -LMLTACLAAS----------RKKKGIDAIDKAFLKSLKYYPRAK----------SVLSK 442
Query: 480 YLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLER 539
Y K + FD + K + +V P G VKG+ +L+
Sbjct: 443 Y-------------------KVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKT 483
Query: 540 SSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHK 599
P+ E Q ++ E +++G R LG+A K
Sbjct: 484 VEEDH-------PIPEEVDQAYKNKVAEFATRGFRSLGVARKRG---------------- 520
Query: 600 KLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAIC 659
E +G++ DPPR K + + + G+ + ++TGD A
Sbjct: 521 -----------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIARETS 569
Query: 660 RQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEM 719
RQ+ L G + ++ + + F+ P+HK +V +L++
Sbjct: 570 RQLGL--GTNIYNAERLGLGGGGDMPGSEVYDFVEAAD--GFAEVFPQHKYNVVEILQQR 625
Query: 720 GEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752
G +VAMTGDGVNDAP+LK AD G+A+ ++
Sbjct: 626 GYLVAMTGDGVNDAPSLKKADTGIAVE-GSSDA 657
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 7e-30
Identities = 41/185 (22%), Positives = 72/185 (38%), Gaps = 49/185 (26%)
Query: 445 TGL--PTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRV 502
TGL + A+ ++ LA+ + +++
Sbjct: 30 TGLKNLLDTAVLEGTDEESARS-----------LASRW-------------------QKI 59
Query: 503 ATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLML 562
+ FD R+ MSV+V E T H+QL+ KG+++ +L S V+ +G +VPLD+ + +
Sbjct: 60 DEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVRH-NGEIVPLDDIMLRKIK 118
Query: 563 SRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGL 622
++ +GLR + +A K DY ESDL+ G +
Sbjct: 119 RVTDTLNRQGLRVVAVATKYLPAREGDYQRA----------------DESDLILEGYIAF 162
Query: 623 RDPPR 627
D
Sbjct: 163 LDHHH 167
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 8e-27
Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 34/137 (24%)
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRS 675
+ + D PR + ++ + G+++++++GD + + + +++ +
Sbjct: 127 PIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNI----------- 175
Query: 676 FTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPA 735
+E+ + P K I+ LK+ G V M GDGVNDA A
Sbjct: 176 ---QEYYS-------NLS------------PEDKVRIIEKLKQNGNKVLMIGDGVNDAAA 213
Query: 736 LKLADIGVAMGITGTEV 752
L LAD+ VAMG G ++
Sbjct: 214 LALADVSVAMG-NGVDI 229
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 105 bits (265), Expect = 2e-25
Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 35/137 (25%)
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRS 675
GV+ L D R +AI + GI+ M++TGDN+ A+ + ++
Sbjct: 135 VSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELG------------ 182
Query: 676 FTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPA 735
++ F+ P K E V+ +++ V AM GDGVNDAPA
Sbjct: 183 --------------LD-------DYFAEVLPHEKAEKVKEVQQ-KYVTAMVGDGVNDAPA 220
Query: 736 LKLADIGVAMGITGTEV 752
L AD+G+A+G GT+V
Sbjct: 221 LAQADVGIAIG-AGTDV 236
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 109 bits (276), Expect = 5e-25
Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 34/137 (24%)
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRS 675
V ++ + DP + + I + + +GIE++++TGD+K TAEA+ + +
Sbjct: 545 TVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVAGTLGI----------- 593
Query: 676 FTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPA 735
K+ +A E + P K IV LK+ G +VAM GDGVNDAPA
Sbjct: 594 ---KKVVA-------EIM------------PEDKSRIVSELKDKGLIVAMAGDGVNDAPA 631
Query: 736 LKLADIGVAMGITGTEV 752
L ADIG+AMG TGT+V
Sbjct: 632 LAKADIGIAMG-TGTDV 647
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 61.0 bits (149), Expect = 1e-09
Identities = 76/345 (22%), Positives = 133/345 (38%), Gaps = 70/345 (20%)
Query: 63 DTLVKILLVAAFI-----SFILAYFHSSDSGDSGFED-YVEPLVIVLILVLNAIVGVWQE 116
TL+ + + A+I F + G Y E ++ LVL +G E
Sbjct: 149 FTLIAMGIGVAWIYSMVAVLWPGVFPHAFRSQEGVVAVYFEAAAVITTLVL---LGQVLE 205
Query: 117 SNAE----KALEALKKIQCES-GKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRV 171
A A+ AL K+ ES ++ DG ++ + GD++ + G+K+P D V
Sbjct: 206 LKAREQTGSAIRALLKLVPESAHRIKEDGSEE-EVSLDNVAVGDLLRVRPGEKIPVDGEV 264
Query: 172 AALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVIN 231
++ V++S +TGE +P+ K V T GS V ++
Sbjct: 265 QEGRSF---VDESMVTGEPIPVAKEA-----SA--------KVIGATINQTGSFVMKALH 308
Query: 232 TGMNTEIGKIQKQIHDASLEESDTPLRKKLDEFGNRLTT-------AIGLVCLVVWIMNY 284
G +T + +I + + DA S P+++ D ++ + ++ +VW
Sbjct: 309 VGSDTMLARIVQMVSDAQ--RSRAPIQRLAD----TVSGWFVPAVILVAVLSFIVWA--- 359
Query: 285 RNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIP--EGL--PAVITTCLALGTRK 340
++ PA +Y AV++ + A P GL P I G K
Sbjct: 360 -------LLGPQPA--------LSYGLIAAVSVLIIACPCALGLATPMSIMV----GVGK 400
Query: 341 MAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLG 385
AQ +++ ++E + + DKTGTLT +T T
Sbjct: 401 GAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDD 445
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 7e-24
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 35/137 (25%)
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRS 675
G++ + D + A+ + + GI+V +ITGDN +AEAI R++ L
Sbjct: 154 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----------- 202
Query: 676 FTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPA 735
+A E L P K E V+ L+ EVVA GDG+NDAPA
Sbjct: 203 ---DLVIA-------EVL------------PHQKSEEVKKLQA-KEVVAFVGDGINDAPA 239
Query: 736 LKLADIGVAMGITGTEV 752
L AD+G+A+G +G++V
Sbjct: 240 LAQADLGIAVG-SGSDV 255
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 102 bits (258), Expect = 7e-23
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 35/137 (25%)
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRS 675
G++ + D + A+ + + GI+V +ITGDN +AEAI R++ L
Sbjct: 448 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----------- 496
Query: 676 FTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPA 735
+A E L P K E V+ L+ EVVA GDG+NDAPA
Sbjct: 497 ---DLVIA-------EVL------------PHQKSEEVKKLQA-KEVVAFVGDGINDAPA 533
Query: 736 LKLADIGVAMGITGTEV 752
L AD+G+A+G +G++V
Sbjct: 534 LAQADLGIAVG-SGSDV 549
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 66.8 bits (164), Expect = 2e-11
Identities = 77/338 (22%), Positives = 135/338 (39%), Gaps = 68/338 (20%)
Query: 63 DTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNA-EK 121
D + + + AAF++ +L+ S +E L++ +L+ G E+ A +
Sbjct: 67 DVMYSMGVGAAFLASVLSTAGVLPREYSFYE--TSVLLLAFLLL-----GRTLEARAKSR 119
Query: 122 ALEALKK---IQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSS 178
EA+KK +Q ++ V+RDG + +P + GDIV + G+K+P D V ++
Sbjct: 120 TGEAIKKLVGLQAKTAVVIRDGKEI-AVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY- 177
Query: 179 LRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEI 238
V++S ++GE +P+LK D VF T G G T +
Sbjct: 178 --VDESMISGEPVPVLKSK-----GD--------EVFGATINNTGVLKIRATRVGGETLL 222
Query: 239 GKIQKQIHDASLEESDTPLRKKLDEFGNRLTT-------AIGLVCLVVWIMNYRNFLSWD 291
+I K + DA S P+++ D ++ + + + W
Sbjct: 223 AQIVKLVEDAM--GSKPPIQRLAD----KVVAYFIPTVLLVAISAFIYWYF--------- 267
Query: 292 VVDGWPANVQFSFEKCTYYFKIAVALAVAAIP--EGL--PAVITTCLALGTRKMAQKNAI 347
+ + F +A+ V A P GL P +T G K A+ +
Sbjct: 268 ----------IAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTV----GMGKGAELGIL 313
Query: 348 VRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLG 385
++ ++E T + DKTGTLT + VT+ L
Sbjct: 314 IKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLN 351
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 101 bits (254), Expect = 3e-22
Identities = 45/137 (32%), Positives = 67/137 (48%), Gaps = 35/137 (25%)
Query: 616 FVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRS 675
G++ + D + A+ + + GI+V +ITGDN +AEAI R++ L
Sbjct: 526 VEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL----------- 574
Query: 676 FTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPA 735
+A E L P K E V+ L+ EVVA GDG+NDAPA
Sbjct: 575 ---DLVIA-------EVL------------PHQKSEEVKKLQA-KEVVAFVGDGINDAPA 611
Query: 736 LKLADIGVAMGITGTEV 752
L AD+G+A+G +G++V
Sbjct: 612 LAQADLGIAVG-SGSDV 627
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 73.7 bits (182), Expect = 1e-13
Identities = 80/338 (23%), Positives = 140/338 (41%), Gaps = 68/338 (20%)
Query: 63 DTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNA-EK 121
D + + + AAF++ +L+ S +E L++ +L+ G E+ A +
Sbjct: 145 DVMYSMGVGAAFLASVLSTAGVLPREYSFYE--TSVLLLAFLLL-----GRTLEARAKSR 197
Query: 122 ALEALKK---IQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSS 178
EA+KK +Q ++ V+RDG + +P + GDIV + G+K+P D V ++
Sbjct: 198 TGEAIKKLVGLQAKTAVVIRDGKEI-AVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY- 255
Query: 179 LRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEI 238
V++S ++GE +P+LK D VF T G G T +
Sbjct: 256 --VDESMISGEPVPVLKSK-----GD--------EVFGATINNTGVLKIRATRVGGETLL 300
Query: 239 GKIQKQIHDASLEESDTPLRKKLDEFGNRLTT-------AIGLVCLVVWIMNYRNFLSWD 291
+I K + DA S P+++ D ++ + + + W F++
Sbjct: 301 AQIVKLVEDAM--GSKPPIQRLAD----KVVAYFIPTVLLVAISAFIYWY-----FIA-- 347
Query: 292 VVDGWPANVQFSFEKCTYYFKIAVALAVAAIP--EGL--PAVITTCLALGTRKMAQKNAI 347
A + F+F +A+ V A P GL P +T G K A+ +
Sbjct: 348 -----HAPLLFAFT-------TLIAVLVVACPCAFGLATPTALTV----GMGKGAELGIL 391
Query: 348 VRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLG 385
++ ++E T + DKTGTLT + VT+ L
Sbjct: 392 IKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLN 429
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 57.9 bits (139), Expect = 1e-08
Identities = 93/679 (13%), Positives = 196/679 (28%), Gaps = 224/679 (32%)
Query: 13 VEQCLKEY--NVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILL 70
V+ K ++D + S++ R W L K++ ++++F V+ +L
Sbjct: 38 VQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEE------MVQKF----VEEVL 87
Query: 71 VAAFISFILAYFHSSDSGDSG----FEDYVEPL--VIVLILVLNAIVGVWQESNAEKALE 124
+ F+++ + S + + + L + N V + K +
Sbjct: 88 RINY-KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYN----VSRLQPYLKLRQ 142
Query: 125 ALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQS 184
AL +++ ++ G+ LG G K +
Sbjct: 143 ALLELRPAKNVLID-----------GV-------LGSG------------K--------T 164
Query: 185 SLTGEAMPILKGTSPVFLDDCELQAK-ENMVFAGTTVVN-GSCVCIVINTGMNTEIGKIQ 242
+ + ++Q K + +F +N +C T + +Q
Sbjct: 165 WVALDV-----------CLSYKVQCKMDFKIFW----LNLKNCNSP------ETVLEMLQ 203
Query: 243 KQIHD-----ASLEESDTPLRKKLDEFGNRLTTAIGL----VCLVVWIMNYRNFLSWDVV 293
K ++ S + + ++ ++ L + CL+V L +V
Sbjct: 204 KLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV--------LL-NVQ 254
Query: 294 DGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPS 353
+ N F+ C KI + + + L A TT ++L M L
Sbjct: 255 NAKAWNA-FNL-SC----KILLTTRFKQVTDFLSAATTTHISLDHHSMT--------LTP 300
Query: 354 VETLG----CTTVICSD-KTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGI 408
E D LTTN ++ I+ T+D
Sbjct: 301 DEVKSLLLKYLDCRPQDLPREVLTTNPRRLS---------IIAESIRDGLATWDN----- 346
Query: 409 VDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGL-PTEAALKVLVEKMG-FP-DV 465
W N D + I + L P E + + +++ FP
Sbjct: 347 --WKHVNCDK----LTTIIESSLNV-------------LEPAE--YRKMFDRLSVFPPSA 385
Query: 466 K----------GRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMS 515
SD + N L S V + + + + ++ + K +
Sbjct: 386 HIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVE----KQPKESTISIPSIYLELKVKLEN 441
Query: 516 VIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLE-------- 567
E H + V+ + D LD+ + + HL+
Sbjct: 442 ----EYALHRSI-----VDHYNIPKTF-DSDDLIPPYLDQ-YFYSHIGHHLKNIEHPERM 490
Query: 568 ------------MSSKGLRCLGMAYK------DELGEF---SDYYSESHPAHKKLLD--- 603
+ K +R A+ + L + Y ++ P +++L++
Sbjct: 491 TLFRMVFLDFRFLEQK-IRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAIL 549
Query: 604 -------PSCYSTIESDLV 615
+ + +DL+
Sbjct: 550 DFLPKIEENLICSKYTDLL 568
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 49.4 bits (118), Expect = 1e-06
Identities = 24/123 (19%), Positives = 34/123 (27%), Gaps = 15/123 (12%)
Query: 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS---GNEDLTGRSFTGKEF 681
R G + + I VI+G + I N F
Sbjct: 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYCNHAS----FDNDYI 132
Query: 682 MALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI 741
S G K ++ L E + + M GD V D A KL+D+
Sbjct: 133 HIDWPHSCKGTCSNQCGCC--------KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDL 184
Query: 742 GVA 744
A
Sbjct: 185 CFA 187
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F Length = 113 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 2e-06
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 17/127 (13%)
Query: 122 ALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRV 181
A++ L +Q ++ V+RDG + +P + GDIV + G+K+P D V ++ V
Sbjct: 2 AIKKLVGLQAKTAVVIRDGKEI-AVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESY---V 57
Query: 182 EQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKI 241
++S ++GE +P+LK + VF T G G T + +I
Sbjct: 58 DESMISGEPVPVLKSKG-------------DEVFGATINNTGVLKIRATRVGGETLLAQI 104
Query: 242 QKQIHDA 248
K + DA
Sbjct: 105 VKLVEDA 111
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} Length = 124 | Back alignment and structure |
|---|
Score = 40.6 bits (96), Expect = 2e-04
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Query: 122 ALEALKKIQCESGKVLRDGYLVP-----DLPAIGLVPGDIVELGVGDKVPADMRVAALKT 176
AL L +Q ++ + + GDI+++ G K P D RV +
Sbjct: 8 ALAKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVIEGHS 67
Query: 177 SSLRVEQSSLTGEAMPILKG 196
V++S +TGEAMP+ K
Sbjct: 68 M---VDESLITGEAMPVAKK 84
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A Length = 227 | Back alignment and structure |
|---|
Score = 42.1 bits (100), Expect = 3e-04
Identities = 7/39 (17%), Positives = 15/39 (38%), Gaps = 5/39 (12%)
Query: 712 IVRMLKEMG----EVVAMTGDGVNDAPALKLADIGVAMG 746
+ ++ + E++ + GD ND P +L
Sbjct: 158 VNKLKEMYSLEYDEILVI-GDSNNDMPMFQLPVRKACPA 195
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 6e-04
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 709 KQEIVRMLKE---MGEVVAMTGDGVNDAPALKLADIGVAMG 746
K +++++LKE +++ + GDG D A AD + G
Sbjct: 158 KGKVIKLLKEKFHFKKIIMI-GDGATDMEACPPADAFIGFG 197
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 Length = 231 | Back alignment and structure |
|---|
Score = 40.9 bits (97), Expect = 6e-04
Identities = 17/73 (23%), Positives = 25/73 (34%), Gaps = 14/73 (19%)
Query: 678 GKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMG----EVVAMTGDGVNDA 733
+A+ S I K I + + +G EV + GDG ND
Sbjct: 133 NLNLVAVDSGFAIHVKKPWINKGSG---------IEKASEFLGIKPKEVAHV-GDGENDL 182
Query: 734 PALKLADIGVAMG 746
A K+ VA+
Sbjct: 183 DAFKVVGYKVAVA 195
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A Length = 258 | Back alignment and structure |
|---|
Score = 41.0 bits (97), Expect = 8e-04
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 14/61 (22%)
Query: 690 IEALSKHGGKVFSRAEPRHKQEIVRMLKEMG----EVVAMTGDGVNDAPALKLADIGVAM 745
+ L G K I M++++G +V A GDG+ND L GVAM
Sbjct: 175 TDVLPAGGSKAEG---------IRMMIEKLGIDKKDVYAF-GDGLNDIEMLSFVGTGVAM 224
Query: 746 G 746
G
Sbjct: 225 G 225
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 753 | |||
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.94 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.93 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.86 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.89 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.82 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.82 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.32 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 98.99 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.94 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.88 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.88 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 98.86 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 98.84 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 98.82 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.8 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.79 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 98.75 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 98.71 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.67 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.66 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 98.66 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.63 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.61 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.6 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.55 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.53 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.53 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.53 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.51 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.5 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.48 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.46 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.44 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.41 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.4 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.39 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.37 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.35 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.32 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 98.32 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 98.28 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.27 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.22 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.21 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.2 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.19 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.18 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.18 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.16 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.15 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.14 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.12 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.08 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.07 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.04 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 98.04 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.03 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 98.02 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.98 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 97.97 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 97.97 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 97.93 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 97.92 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 97.9 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.9 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 97.9 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 97.89 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.87 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.87 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.86 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 97.83 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.8 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.79 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.78 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.78 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.73 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.71 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 97.67 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.67 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.65 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.64 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.64 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.62 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.6 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.6 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.59 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.58 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.57 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.56 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 97.52 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.52 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.52 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.5 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.49 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 97.49 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.49 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.48 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.44 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.39 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.37 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.32 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.31 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.29 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.21 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.19 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 97.19 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.18 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.17 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 97.17 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.16 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 97.1 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 97.05 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 96.96 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.95 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 96.93 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 96.81 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 96.81 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 96.74 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 96.66 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.65 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.62 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.55 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 96.52 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 96.42 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.36 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 96.3 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 96.28 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.28 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 96.27 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 96.2 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 96.1 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.06 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.48 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 95.38 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 95.25 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 95.18 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 94.97 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 94.42 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 94.33 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 93.92 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 93.23 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 92.1 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 91.53 | |
| 2i7d_A | 193 | 5'(3')-deoxyribonucleotidase, cytosolic type; hydr | 91.34 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 90.99 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 90.67 | |
| 2g80_A | 253 | Protein UTR4; YEL038W, UTR4 protein (unknown trans | 89.19 | |
| 2arf_A | 165 | Wilson disease ATPase; P-type ATPase,ATP7B, copper | 88.88 | |
| 1q92_A | 197 | 5(3)-deoxyribonucleotidase; alpha-beta rossman fol | 85.7 | |
| 2hhl_A | 195 | CTD small phosphatase-like protein; CTD phosphatas | 85.13 | |
| 2ght_A | 181 | Carboxy-terminal domain RNA polymerase II polypept | 83.72 | |
| 1xpj_A | 126 | Hypothetical protein; structural genomics, MCSG, p | 81.04 |
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-107 Score=976.24 Aligned_cols=710 Identities=48% Similarity=0.752 Sum_probs=584.2
Q ss_pred CcccccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccC
Q 004437 5 PFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHS 84 (753)
Q Consensus 5 ~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~ 84 (753)
+-+||.++++++++.|+|+..+|||++|+++|+++||+|+++.++++++|+++++||+++++++++++++++++++++..
T Consensus 2 ~~~~~~~~~~~~~~~l~~~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~ 81 (995)
T 3ar4_A 2 MEAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEE 81 (995)
T ss_dssp CTTGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHHCCSSCCCCCCCCHHHHHHGGGCSHHHHHHHHHHHHHHHHTTSCC
T ss_pred cchhhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhcCCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 45799999999999999999999999999999999999999998889999999999999999999999999999886542
Q ss_pred CCCCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCe--eeeeecCCCCCCCcEEEecCC
Q 004437 85 SDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGY--LVPDLPAIGLVPGDIVELGVG 162 (753)
Q Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~--~~~~i~~~~Lv~GDII~l~~G 162 (753)
. ...+..|+++++++++++++.++++++|+|+++.+++|+++.+.+++|+|||+ . ++|++++|||||||.|++|
T Consensus 82 ~---~~~~~~~~~~~~i~~~~~~~~~i~~~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~-~~I~~~~lv~GDiV~l~~G 157 (995)
T 3ar4_A 82 G---EETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPEMGKVYRADRKSV-QRIKARDIVPGDIVEVAVG 157 (995)
T ss_dssp S---SGGGSSSHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHGGGSCSEEEEEBTTCSSC-EEEEGGGCCTTCEEEEETT
T ss_pred c---ccchhhHHHhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCeEEEEeCCCceE-EEEEHHHCCCCCEEEECCC
Confidence 1 01234688899999999999999999999999999999999999999999887 4 5699999999999999999
Q ss_pred CcccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHH
Q 004437 163 DKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQ 242 (753)
Q Consensus 163 ~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~ 242 (753)
|+|||||+|+++.++++.||||+|||||.|+.|.+.+...++....+++|++|+||.+.+|+++++|++||.+|.+|++.
T Consensus 158 d~IPaD~~ll~~~s~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~ 237 (995)
T 3ar4_A 158 DKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIR 237 (995)
T ss_dssp CBCCSEEEEEEECSSCEEEECHHHHCCCSCEEECCSCCCCTTCCGGGCTTEECTTCEEEECEEEEEEEECGGGSHHHHHH
T ss_pred CcccccEEEEEEeeceEEEEcccccCCCcceeccccccCCcccCcccccceEecCCEEEcceEEEEEEEcCcchHHHHHH
Confidence 99999999988777899999999999999999998655444555677889999999999999999999999999999999
Q ss_pred HHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhc
Q 004437 243 KQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAI 322 (753)
Q Consensus 243 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~i 322 (753)
+.+.++ +.+++|+++.+++++.+++++++++++++|++.+..+........| +..+...|..++++++++|
T Consensus 238 ~~~~~~--~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ai~l~v~ai 308 (995)
T 3ar4_A 238 DQMAAT--EQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSW-------IRGAIYYFKIAVALAVAAI 308 (995)
T ss_dssp HHHHTC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSCSSSSCH-------HHHHHHHHHHHHHHHHHHS
T ss_pred HHhhcC--CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchH-------HHHHHHHHHHHHHHHHHhc
Confidence 999776 6789999999999999999998888888776633211110000011 2333456778899999999
Q ss_pred cCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccc---eeeeeeecCc
Q 004437 323 PEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTT---ISRIFHVEGT 399 (753)
Q Consensus 323 P~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~---~~~~~~~~~~ 399 (753)
||+||++++++++.++.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+. ......+++.
T Consensus 309 P~~Lp~~vt~~la~~~~~ma~~~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 388 (995)
T 3ar4_A 309 PEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGS 388 (995)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHTTEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEEEEEEEEETTEEEEEEEEECCS
T ss_pred CcchHHHHHHHHHHHHHHhccCCcEeccchhhhhhcCceEEEecCCCCcccCceEEEEEEecCcccCcccccceeeccCC
Confidence 9999999999999999999999999999999999999999999999999999999999987643221 1112344555
Q ss_pred ccCCCCCCccc--CCCCCccHHHHHHHHHHhhccCCeeecC--CCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhh
Q 004437 400 TYDPKDGGIVD--WPCYNMDANLQAMAKICAVCNDAGVYCD--GPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQ 475 (753)
Q Consensus 400 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~c~~~~~~~~--~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~ 475 (753)
+++|....... ......++.+..++.++++||++.+..+ +..+...|+|+|.|++.++++.|+ +......... .
T Consensus 389 ~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~~~a~~~g~-~~~~~~~i~~-~ 466 (995)
T 3ar4_A 389 TYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNV-FNTEVRNLSK-V 466 (995)
T ss_dssp SSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHHHHHHHHCT-TCCCCTTSCT-T
T ss_pred CcCCccccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHHHHHHHcCC-cccccccccc-c
Confidence 66665221110 0011224557789999999999876542 345667799999999999999887 1110000000 0
Q ss_pred hhhhhcccccccccccccccccccceeeeecCCCCCceEEEEEecCCC-----eEEEEEcCChHHHHHhcccccccCCce
Q 004437 476 LAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTG-----HNQLLVKGSVESLLERSSHVQLADGSV 550 (753)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~-----~~~~~~KGa~e~il~~c~~~~~~~~~~ 550 (753)
.....+....+..+++++++||+|+|||||++++..+| +..+|+||+||.|+++|+.+..+ +..
T Consensus 467 ----------~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~c~~~~~~-~~~ 535 (995)
T 3ar4_A 467 ----------ERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVG-TTR 535 (995)
T ss_dssp ----------TSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHTEEEEEET-TEE
T ss_pred ----------cccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHhcchhhcC-CCc
Confidence 00000000114568899999999999999999997665 57899999999999999987654 467
Q ss_pred eeCCHHHHHHHHHHHHHh--hhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCc
Q 004437 551 VPLDEPCWQLMLSRHLEM--SSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRG 628 (753)
Q Consensus 551 ~~l~~~~~~~~~~~~~~~--~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~ 628 (753)
.|++++.++.+.+.+++| +++|+||+++|||+........ ...+...+..+|+|++|+|+++++|++|+
T Consensus 536 ~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~~~---------~~~~~~~~~~~e~~l~~lG~~~i~D~lr~ 606 (995)
T 3ar4_A 536 VPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEM---------VLDDSSRFMEYETDLTFVGVVGMLDPPRK 606 (995)
T ss_dssp EECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGGGC---------CTTCGGGHHHHTCSEEEEEEEEEECCBCT
T ss_pred ccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCcccccc---------ccccchhhhhhccCcEEEEEEeecCCCch
Confidence 889999999999999999 9999999999999753211000 00111234567899999999999999999
Q ss_pred hhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchh
Q 004437 629 GVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRH 708 (753)
Q Consensus 629 ~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~ 708 (753)
+++++|+.|+++||+++|+|||+..+|.++|+++||......+...+++|+++..+.+++..+.+.+ ..+++|++|+|
T Consensus 607 ~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~i~~~~~~g~~~~~l~~~~~~~~~~~--~~v~~r~~P~~ 684 (995)
T 3ar4_A 607 EVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRR--ACCFARVEPSH 684 (995)
T ss_dssp THHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCCCTTTEEEHHHHHTSCHHHHHHHHHH--CCEEESCCSSH
T ss_pred hHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCcccceEEEchhhhhCCHHHHHHHHhh--CcEEEEeCHHH
Confidence 9999999999999999999999999999999999998655444567889999999998888888877 68999999999
Q ss_pred HHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccC
Q 004437 709 KQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 709 K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~ 752 (753)
|.++|+.+|++|+.|+|+|||.||+|||++||+||||| +|+|+
T Consensus 685 K~~~v~~l~~~g~~v~~~GDG~ND~~alk~Advgiamg-~g~~~ 727 (995)
T 3ar4_A 685 KSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAV 727 (995)
T ss_dssp HHHHHHHHHTTTCCEEEEECSGGGHHHHHHSTEEEEET-TSCHH
T ss_pred HHHHHHHHHHCCCEEEEEcCCchhHHHHHHCCeEEEeC-CCCHH
Confidence 99999999999999999999999999999999999999 99875
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-105 Score=963.34 Aligned_cols=674 Identities=30% Similarity=0.441 Sum_probs=563.8
Q ss_pred CcccccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccC
Q 004437 5 PFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHS 84 (753)
Q Consensus 5 ~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~ 84 (753)
..+||.++++|+++.|+|++.+|||++|+++|+++||+|+++.++.+++|+.+++||.++++++++++++++++.+.+..
T Consensus 50 ~~~~~~~~~~~~~~~l~~~~~~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~~~q~~~~~~~il~~aa~~~~~~~~~~~ 129 (1034)
T 3ixz_A 50 EINDHQLSVAELEQKYQTSATKGLSASLAAELLLRDGPNALRPPRGTPEYVKFARQLAGGLQCLMWVAAAICLIAFAIQA 129 (1034)
T ss_pred CcchhhCCHHHHHHHhCCCcccCCCHHHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhh
Confidence 45899999999999999999999999999999999999999998889999999999999999999999999988764422
Q ss_pred CCCCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCc
Q 004437 85 SDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDK 164 (753)
Q Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~ 164 (753)
..+.......|+++++++++++++.+++++||+|+++++++|+++.+++++|+|||++ ++|++++|||||||.|++||+
T Consensus 130 ~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~-~~I~~~eLv~GDiV~l~~Gd~ 208 (1034)
T 3ixz_A 130 SEGDLTTDDNLYLALALIAVVVVTGCFGYYQEFKSTNIIASFKNLVPQQATVIRDGDK-FQINADQLVVGDLVEMKGGDR 208 (1034)
T ss_pred ccCCCccccchhhhhhhheeeeHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEE-EEEEHHHCCCCcEEEEcCCce
Confidence 1111112235777888899999999999999999999999999999999999999999 569999999999999999999
Q ss_pred ccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHH
Q 004437 165 VPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQ 244 (753)
Q Consensus 165 iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~ 244 (753)
|||||+|+++ +++.||||+|||||.|+.|.+.... ....+.+|++|+||.+.+|.+.++|++||.+|.+|++.+.
T Consensus 209 VPAD~~ll~~--~~l~VdES~LTGES~pv~K~~~~~~---~~~~~~~n~~f~GT~v~~G~~~~vVv~tG~~T~~GkI~~~ 283 (1034)
T 3ixz_A 209 VPADIRILQA--QGRKVDNSSLTGESEPQTRSPECTH---ESPLETRNIAFFSTMCLEGTAQGLVVNTGDRTIIGRIASL 283 (1034)
T ss_pred ecCCeEEEEe--CCceEEecccCCCCCCeeccCCCcc---ccccccccceecceeEEeecceEEEEeehhhhHhhHHHHh
Confidence 9999999985 6789999999999999999874321 2234668999999999999999999999999999999998
Q ss_pred HhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccC
Q 004437 245 IHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPE 324 (753)
Q Consensus 245 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~ 324 (753)
+..+ +..++|+++.++++..++..++++++++++++.+... ..+...+.+++++++++|||
T Consensus 284 ~~~~--~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~i~l~v~~iPe 344 (1034)
T 3ixz_A 284 ASGV--ENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCIG-----------------YTFLRAMVFFMAIVVAYVPE 344 (1034)
T ss_pred hccc--ccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------------chHHHHHHHHHHHHHheecc
Confidence 8765 6778999999999999998888877777666533110 12245677889999999999
Q ss_pred ChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCC
Q 004437 325 GLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPK 404 (753)
Q Consensus 325 ~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 404 (753)
+||+++++++++++.||+++|++||+++++|+||++++||||||||||+|+|+|.+++..+..+..... ..+.
T Consensus 345 ~Lp~~vti~la~~~~rmak~~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~~~~~~~~~~~~~-------~~~~ 417 (1034)
T 3ixz_A 345 GLLATVTVCLSLTAKRLASKNCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTT-------EDQS 417 (1034)
T ss_pred ccHHHHHHHHHHHHHHHhhCCeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEEEECCccccccCc-------cccc
Confidence 999999999999999999999999999999999999999999999999999999999987653321110 0000
Q ss_pred CCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCC-----cceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhh
Q 004437 405 DGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGP-----LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAAN 479 (753)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~-----~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~ 479 (753)
+.. .....+....++.++++||++....+.. .....|+|+|.|++.++++.+......
T Consensus 418 -~~~----~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~~~~------------ 480 (1034)
T 3ixz_A 418 -GQT----FDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNAMGY------------ 480 (1034)
T ss_pred -ccc----cCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCChHHH------------
Confidence 000 0112345678899999999987653321 245679999999999998765432111
Q ss_pred hcccccccccccccccccccceeeeecCCCCCceEEEEEecCC---CeEEEEEcCChHHHHHhcccccccCCceeeCCHH
Q 004437 480 YLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPT---GHNQLLVKGSVESLLERSSHVQLADGSVVPLDEP 556 (753)
Q Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~---~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~ 556 (753)
+..++++.++||+|.||+|+++++..+ +++.+|+|||||.|+++|+.+.. +|...|++++
T Consensus 481 ----------------~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~-~~~~~~l~~~ 543 (1034)
T 3ixz_A 481 ----------------RERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILI-KGQELPLDEQ 543 (1034)
T ss_pred ----------------HHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhc-CCceecCCHH
Confidence 456788999999999999998887543 67899999999999999998764 6778899999
Q ss_pred HHHHHHHHHHHhhhccceEEEEEEeccccc-cccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHH
Q 004437 557 CWQLMLSRHLEMSSKGLRCLGMAYKDELGE-FSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAID 635 (753)
Q Consensus 557 ~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~ 635 (753)
.++.+.+.+.+|+.+|+||+++|||....+ +..... .+....+..|+||+|+|+++++||+|++++++|+
T Consensus 544 ~~~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~---------~~~~~~~~~e~~l~~lGlv~i~Dp~r~~~~~aI~ 614 (1034)
T 3ixz_A 544 WREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYA---------FDVEAMNFPTSGLSFAGLVSMIDPPRATVPDAVL 614 (1034)
T ss_pred HHHHHHHHHHHHHhcCcHhheEeEEecChhhcccccc---------cchhhhhccccCcEEEEEEeccCCCchhHHHHHH
Confidence 999999999999999999999999985432 111110 0111233458999999999999999999999999
Q ss_pred HHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCc--------------------cccccccchhhhccCHHHHHHHHHh
Q 004437 636 DCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNED--------------------LTGRSFTGKEFMALSSTQQIEALSK 695 (753)
Q Consensus 636 ~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (753)
+|+++||+|+|+|||+..+|.++|+++|+...... ....+++|.++..+.+++..+.+..
T Consensus 615 ~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~ 694 (1034)
T 3ixz_A 615 KCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEALRT 694 (1034)
T ss_pred HHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCchHHHHHHHhhCccchhccccccceeEEecHhhhhCCHHHHHHHHHh
Confidence 99999999999999999999999999999753221 1234678888888888888888887
Q ss_pred cCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 696 HGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 696 ~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
+...+++|++|++|.++++.+++.|+.|+|+|||.||++||++||+|||||+||+|++
T Consensus 695 ~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~a 752 (1034)
T 3ixz_A 695 HPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAA 752 (1034)
T ss_pred CCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHH
Confidence 6667999999999999999999999999999999999999999999999999998753
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-105 Score=961.16 Aligned_cols=675 Identities=29% Similarity=0.448 Sum_probs=561.1
Q ss_pred CCCcccccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhc
Q 004437 3 EKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYF 82 (753)
Q Consensus 3 ~~~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~ 82 (753)
+...+||.++++++++.|+|++.+|||++|+++|+++||+|+++.++++++|+.+++||.++++++++++++++++++.+
T Consensus 43 ~~~~~~~~~~~~~~~~~l~t~~~~GLs~~e~~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~ 122 (1028)
T 2zxe_A 43 EVSMDDHKLSLDELHNKYGTDLTRGLTNARAKEILARDGPNSLTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFLAYGI 122 (1028)
T ss_dssp SCCCCCSSSCHHHHHHHHTCCSSSCBCHHHHHHHHHHHCCSCCCCCCCCCHHHHHHTTTTSTHHHHHHHHHHHHHHHHHH
T ss_pred hcCcchhhCCHHHHHHHhCcCccCCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHh
Confidence 34568999999999999999988999999999999999999999888899999999999999999999999999987654
Q ss_pred cCCCCCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCC
Q 004437 83 HSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVG 162 (753)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G 162 (753)
....+.......|+++++++++++++.++++++++|+++.+++|+++.+.+++|+|||++ ++|++++|||||||.|++|
T Consensus 123 ~~~~~~~~~~~~~~~~~~i~~vv~i~~~~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~-~~I~~~~Lv~GDiV~l~~G 201 (1028)
T 2zxe_A 123 QAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQEAKSSRIMDSFKNMVPQQALVIRDGEK-STINAEFVVAGDLVEVKGG 201 (1028)
T ss_dssp HHHSSCCCCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCCHHHHHHTTSCSEEEEEETTEE-EEEEGGGCCTTCEEEEETT
T ss_pred hcccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEECCEE-EEEEHHHCCcCCEEEECCC
Confidence 310000011225777888889999999999999999999999999999999999999998 5699999999999999999
Q ss_pred CcccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHH
Q 004437 163 DKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQ 242 (753)
Q Consensus 163 ~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~ 242 (753)
|+|||||+|+++ .++.||||+|||||.|+.|.+.... .+..+..|++|+||.+.+|++.++|++||.+|.+|++.
T Consensus 202 d~IPaD~~ll~g--~~~~VdeS~LTGES~pv~K~~~~~~---~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~ 276 (1028)
T 2zxe_A 202 DRIPADLRIISA--HGCKVDNSSLTGESEPQTRSPEFSS---ENPLETRNIAFFSTNCVEGTARGVVVYTGDRTVMGRIA 276 (1028)
T ss_dssp CBCCSEEEEEEE--EEEEEECHHHHSCCSCEECCSSCCC---SSTTTCSSEECTTCEEEEEEEEEEEEECGGGSHHHHHH
T ss_pred CEeeceEEEEee--CcEEEEcCccCCCCcceecccCCCC---CCcccccceEEeCceEEcceEEEEEEEeccccHHHHHH
Confidence 999999999984 4699999999999999999875332 12446789999999999999999999999999999999
Q ss_pred HHHhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhc
Q 004437 243 KQIHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAI 322 (753)
Q Consensus 243 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~i 322 (753)
+.+..+ +.+++|+++.+++++.++++++++++++++++.+.. ..+ +...+.+++++++++|
T Consensus 277 ~~~~~~--~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~~~------~~~-----------~~~~~~~~i~llv~~i 337 (1028)
T 2zxe_A 277 TLASGL--EVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL------GYS-----------WLEAVIFLIGIIVANV 337 (1028)
T ss_dssp HHHHHS--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT------TCC-----------HHHHHHHHHHHHHHHS
T ss_pred HhccCC--CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------cCc-----------HHHHHHHHHHHHHHHc
Confidence 998776 678999999999999999998888888777663211 011 2345677888999999
Q ss_pred cCChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccC
Q 004437 323 PEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYD 402 (753)
Q Consensus 323 P~~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~ 402 (753)
||+||++++++++.++.+|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+.. .. ..
T Consensus 338 P~~Lp~~vti~l~~~~~~mak~~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~------~~--~~ 409 (1028)
T 2zxe_A 338 PEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEA------DT--TE 409 (1028)
T ss_dssp CTTHHHHHHHHHHHHHHHHHTTTEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEEEETTEEEEC------CC--CT
T ss_pred CchHHHHHHHHHHHHHHHHhhCCceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEEEECCeeeec------cC--CC
Confidence 99999999999999999999999999999999999999999999999999999999999876542210 00 00
Q ss_pred CCCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCC--C---cceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhh
Q 004437 403 PKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDG--P---LFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLA 477 (753)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~--~---~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~ 477 (753)
+..+. .....+...+.++.++++||++.+..+. + .....|+|+|.|++.++++.+....
T Consensus 410 ~~~~~----~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~~------------ 473 (1028)
T 2zxe_A 410 NQSGA----AFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSVQ------------ 473 (1028)
T ss_dssp TCCSC----CCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCHH------------
T ss_pred Ccccc----ccccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCHH------------
Confidence 00000 0011234567888999999988765332 1 2345789999999999987532110
Q ss_pred hhhcccccccccccccccccccceeeeecCCCCCceEEEEEecC---CCeEEEEEcCChHHHHHhcccccccCCceeeCC
Q 004437 478 ANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREP---TGHNQLLVKGSVESLLERSSHVQLADGSVVPLD 554 (753)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~---~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~ 554 (753)
..+..++++.++||+|.||||+++++.. ++++++|+||+||.|+++|+.+. .+|...|++
T Consensus 474 ----------------~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~-~~g~~~~l~ 536 (1028)
T 2zxe_A 474 ----------------GMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTIL-LNGAEEPLK 536 (1028)
T ss_dssp ----------------HHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEEC-BTTBCCBCC
T ss_pred ----------------HHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhh-cCCCcccCC
Confidence 0034578899999999999999999864 46789999999999999999864 467788999
Q ss_pred HHHHHHHHHHHHHhhhccceEEEEEEeccccc-cccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHH
Q 004437 555 EPCWQLMLSRHLEMSSKGLRCLGMAYKDELGE-FSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKA 633 (753)
Q Consensus 555 ~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~ 633 (753)
++.++.+.+.+++|+++|+||+++|||....+ +.... . .+.......|+|++|+|+++++||+|++++++
T Consensus 537 ~~~~~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~-~--------~~~~~~~~~e~~l~~lG~i~i~Dplr~~~~~a 607 (1028)
T 2zxe_A 537 EDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGY-P--------FDADEPNFPTTDLCFVGLMAMIDPPRAAVPDA 607 (1028)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTC-C--------CCTTTTCSCCSSEEEEEEEEEECCBCTTHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEEEEecCcccccccc-c--------cchhhhhhhhcCeEEEeeeccCCCCChhHHHH
Confidence 99999999999999999999999999985432 11100 0 01112234578999999999999999999999
Q ss_pred HHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCcc--------------------ccccccchhhhccCHHHHHHHH
Q 004437 634 IDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDL--------------------TGRSFTGKEFMALSSTQQIEAL 693 (753)
Q Consensus 634 i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~ 693 (753)
|++|+++||+|+|+|||+..+|.++|+++||....... ...+++|+++..+.++++.+++
T Consensus 608 I~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~vi~G~~l~~~~~~~l~~~~ 687 (1028)
T 2zxe_A 608 VGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLDDIL 687 (1028)
T ss_dssp HHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCCCHHHHHHHTTCCGGGSCGGGCCEEEEEHHHHTTCCHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCchhHHHHHhhcCcchhhccccccceEEEEcHHhhhCCHHHHHHHH
Confidence 99999999999999999999999999999997532110 1346788889888888888888
Q ss_pred HhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccC
Q 004437 694 SKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 694 ~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~ 752 (753)
.++...+++|++|+||..+|+.+|+.|+.|+|+|||.||+|||++||||||||++|+|+
T Consensus 688 ~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAmg~~gtd~ 746 (1028)
T 2zxe_A 688 HYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAMGISGSDV 746 (1028)
T ss_dssp HHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEESSSCCHH
T ss_pred hhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEeCCccCHH
Confidence 87655799999999999999999999999999999999999999999999999779875
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-99 Score=883.60 Aligned_cols=580 Identities=30% Similarity=0.453 Sum_probs=490.1
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCCCCCCCCcccch
Q 004437 17 LKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYV 96 (753)
Q Consensus 17 ~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (753)
.+.|+++..+|||++|+++|+++||+|+++.+ +.++|+.++++|+++++++++++++++++++ .|.
T Consensus 77 ~~~l~t~~~~GLs~~ea~~r~~~~G~N~l~~~-~~~~~~~~l~~f~~~~~~ll~~aai~s~~~g-------------~~~ 142 (920)
T 1mhs_A 77 EDMLQTDTRVGLTSEEVVQRRRKYGLNQMKEE-KENHFLKFLGFFVGPIQFVMEGAAVLAAGLE-------------DWV 142 (920)
T ss_dssp STTTTTCCCCCCCSHHHHHHHHHTSSSSCCCC-CCSSHHHHTHHHHHHHHHHHHHHHHHCTTCS-------------CSS
T ss_pred HHHhCCCcCCCCCHHHHHHHHHhcCCCccCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------hHH
Confidence 45689888899999999999999999999865 4778899999999999999999888876542 467
Q ss_pred hhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEEeeC
Q 004437 97 EPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKT 176 (753)
Q Consensus 97 ~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s 176 (753)
++++++++++++.++++++++|+++.+++|+++.+.+++|+|||++ ++|++++|||||||.|++||+|||||+|+++
T Consensus 143 ~~~~i~~vv~i~~~i~~~qe~~a~~a~~~L~~l~~~~a~V~RdG~~-~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g-- 219 (920)
T 1mhs_A 143 DFGVICGLLLLNAVVGFVQEFQAGSIVDELKKTLALKAVVLRDGTL-KEIEAPEVVPGDILQVEEGTIIPADGRIVTD-- 219 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSSCEEECSSSE-EECCTTTSCTTSEEEECTTCBCSSEEEEEEE--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEECCEE-EEEEHHHcCCCCEEEeCCCCccccceEEEec--
Confidence 7778888889999999999999999999999999999999999999 5699999999999999999999999999984
Q ss_pred C-cEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCCCC
Q 004437 177 S-SLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEESDT 255 (753)
Q Consensus 177 ~-~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~~~ 255 (753)
. .+.||||+|||||.|+.|.+ ++.+|+||.+.+|.+.++|++||.+|.+|++.++++.+ +..++
T Consensus 220 ~~~l~VDES~LTGES~PV~K~~-------------gd~v~sGT~v~~G~~~~~V~~tG~~T~~g~I~~lv~~a--~~~~~ 284 (920)
T 1mhs_A 220 DAFLQVDQSALTGESLAVDKHK-------------GDQVFASSAVKRGEAFVVITATGDNTFVGRAAALVNAA--SGGSG 284 (920)
T ss_dssp SSCCEEBCTTTSSCCCCEECCS-------------SCEECSCBCCSCCCEEEEEEECSTTCSTTTTTSSCCCC--CCCCC
T ss_pred CceeeeeccccCCCCcceEecC-------------CCeeecCceEecceEEEEEEEeCCcCHHHHHHHHHhhc--ccCCc
Confidence 4 38999999999999999987 68999999999999999999999999999999887665 56789
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHHHH
Q 004437 256 PLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCLA 335 (753)
Q Consensus 256 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~~~ 335 (753)
|+++.++++..+++++++++++++|++.+ . . + ..+...+.+++++++++|||+||++++++++
T Consensus 285 ~l~~~~~~i~~~l~~~~~~~~~i~~~~~~---~----~-~---------~~~~~~l~~av~llV~aiP~aLp~~vti~la 347 (920)
T 1mhs_A 285 HFTEVLNGIGTILLILVIFTLLIVWVSSF---Y----R-S---------NPIVQILEFTLAITIIGVPVGLPAVVTTTMA 347 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTT---T----T-T---------CCHHHHHHHHHHHHHHHSCCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH---h----c-C---------CcHHHHHHHHHHHHHHhCchhHHHHHHHHHH
Confidence 99999999999888877777766655421 0 0 0 1124567788999999999999999999999
Q ss_pred HHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCCCC
Q 004437 336 LGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYN 415 (753)
Q Consensus 336 ~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (753)
.++.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+++..+ .+++
T Consensus 348 ~g~~~mak~~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~--------------g~~~------------ 401 (920)
T 1mhs_A 348 VGAAYLAKKKAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVA--------------GVDP------------ 401 (920)
T ss_dssp HHHHHHHHTTCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCS--------------CCCC------------
T ss_pred HHHHHHHhCCeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecC--------------CCCH------------
Confidence 99999999999999999999999999999999999999999998865421 1111
Q ss_pred ccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhccccccccccccccc
Q 004437 416 MDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWW 495 (753)
Q Consensus 416 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (753)
.+++.++++|++.. ...+||+|.|++.++.+.+.... .
T Consensus 402 -----~~ll~~a~l~~~~~--------~~~~~P~e~Al~~~~~~~~~~~~-----------------------------~ 439 (920)
T 1mhs_A 402 -----EDLMLTACLAASRK--------KKGIDAIDKAFLKSLKYYPRAKS-----------------------------V 439 (920)
T ss_dssp -----THHHHHHHHSCCCS--------SCSCCSHHHHHHHHHHHSSSCCG-----------------------------G
T ss_pred -----HHHHHHHHHhcCCc--------ccCCChHHHHHHHHHHhcccchh-----------------------------h
Confidence 13455667787532 11249999999998876543110 0
Q ss_pred ccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceE
Q 004437 496 TKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRC 575 (753)
Q Consensus 496 ~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rv 575 (753)
...++++..+||+|.+|+|+++++..+|+.++|+||+||.++++|+.. .+++++.++.+.+.+++|+++|+||
T Consensus 440 ~~~~~~~~~~pF~s~~k~ms~iv~~~~g~~~~~~KGape~il~~c~~~-------~~~~~~~~~~~~~~~~~~a~~G~Rv 512 (920)
T 1mhs_A 440 LSKYKVLQFHPFDPVSKKVVAVVESPQGERITCVKGAPLFVLKTVEED-------HPIPEEVDQAYKNKVAEFATRGFRS 512 (920)
T ss_dssp GSCCCEEEEEEEETTTTEEEEEECCSSSSCEEEEEECHHHHHHHCCCS-------SCCCHHHHHHHHHHHHHHHTSSCCC
T ss_pred ccccceeEEeeccCCCCeEEEEEEeCCCcEEEEEeCCHHHHHHhcccc-------CCCCHHHHHHHHHHHHHHHhCCCEE
Confidence 345678899999999999999998777788899999999999999741 3577788888999999999999999
Q ss_pred EEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHH
Q 004437 576 LGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTA 655 (753)
Q Consensus 576 l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a 655 (753)
+++|||. .|.+++|+|+++++||+|++++++|++|+++||+|+|+|||+..+|
T Consensus 513 L~vA~~~---------------------------~e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~~TA 565 (920)
T 1mhs_A 513 LGVARKR---------------------------GEGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAVGIA 565 (920)
T ss_dssp CEECCCS---------------------------SSCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCHHHH
T ss_pred EEEEEec---------------------------cccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCHHHH
Confidence 9999873 1467899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHH
Q 004437 656 EAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPA 735 (753)
Q Consensus 656 ~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~ 735 (753)
.++|+++||..........+++|. ..+.++++.+.+.+ ..+|+|++|+||.++|+.+|++|+.|+|+|||.||+||
T Consensus 566 ~aIA~~lGI~~~~~~~~~~~~~g~--~~~~~~el~~~~~~--~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapa 641 (920)
T 1mhs_A 566 RETSRQLGLGTNIYNAERLGLGGG--GDMPGSEVYDFVEA--ADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPS 641 (920)
T ss_dssp HHHHHHHTSSCSCCCSSSSSSCBC--CCGGGGGGGTTTTT--TSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHH
T ss_pred HHHHHHcCCCccccCccceeecCc--ccCCHHHHHHHHhh--CeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHH
Confidence 999999999642111112234443 23333344444444 57999999999999999999999999999999999999
Q ss_pred hhhcCceEecCCCCccC
Q 004437 736 LKLADIGVAMGITGTEV 752 (753)
Q Consensus 736 l~~A~vgiamgi~g~~~ 752 (753)
|++|||||||| +|+|+
T Consensus 642 Lk~AdvGIAmg-~gtd~ 657 (920)
T 1mhs_A 642 LKKADTGIAVE-GSSDA 657 (920)
T ss_dssp HHHSSEEEEET-TSCHH
T ss_pred HHhCCcCcccc-cccHH
Confidence 99999999999 99875
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-99 Score=885.56 Aligned_cols=598 Identities=28% Similarity=0.411 Sum_probs=491.4
Q ss_pred cccccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccCC
Q 004437 6 FPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHSS 85 (753)
Q Consensus 6 ~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 85 (753)
-+||.++++++++.|+++ .+|||++|+++|+++||+|+++.++ +++|+.++++|.++++++++++++++++++...+
T Consensus 12 ~~~~~~~~~~~~~~l~~~-~~GLs~~e~~~r~~~~G~N~l~~~~-~~~~~~~l~~~~~p~~~il~~aaiis~~l~~~~~- 88 (885)
T 3b8c_A 12 VDLEKIPIEEVFQQLKCS-REGLTTQEGEDRIQIFGPNKLEEKK-ESKLLKFLGFMWNPLSWVMEMAAIMAIALANGDG- 88 (885)
T ss_dssp CCCSSSSTTCCTTTSSSC-SSCSTHHHHHHHSSSCCSCCTTTTC-CCTTSSTTSCCCGGGSSHHHHHHHGGGGSSCCTT-
T ss_pred hhhHhCCHHHHHHHhCCC-CCCCCHHHHHHHHHhcCCCccCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-
Confidence 478999999999999998 6899999999999999999998766 7788888999999999999999999887753221
Q ss_pred CCCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcc
Q 004437 86 DSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKV 165 (753)
Q Consensus 86 ~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~i 165 (753)
....|.++++++++++++.++++++++|+++.+++|.++.+.+++|+|||++ ++|++++|||||||.|++||+|
T Consensus 89 -----~~~~~~~~~~I~~~v~i~~~l~~~qe~ka~~al~~L~~~~~~~a~V~RdG~~-~~I~~~~Lv~GDiV~l~~Gd~I 162 (885)
T 3b8c_A 89 -----RPPDWQDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKW-SEQEAAILVPGDIVSIKLGDII 162 (885)
T ss_dssp -----SCSCCTTHHHHHHHTTTTTTTTTTTTTTTTTHHHHTTTSCSCCCCCCCSSCS-CCCCTTTTCTTSBCCCCSSCCC
T ss_pred -----ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCEE-EEEEHHHCCCCCEEEECCCCEE
Confidence 1235788888888889999999999999999999999998999999999998 5699999999999999999999
Q ss_pred cccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHH
Q 004437 166 PADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQI 245 (753)
Q Consensus 166 PaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~ 245 (753)
||||+|+++ ..+.||||+|||||.|+.|.+ ++.+|+||.+.+|++.++|++||.+|.+|++.+++
T Consensus 163 PaDg~ll~g--~~l~VdES~LTGES~Pv~K~~-------------g~~v~~GT~v~~G~~~~~V~~tG~~T~~g~i~~lv 227 (885)
T 3b8c_A 163 PADARLLEG--DPLKVDQSALTGESLPVTKHP-------------GQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLV 227 (885)
T ss_dssp SSCCCCCCS--SCBCCCCCSTTCCSSCCCBSS-------------CCCCCSCCCCCSCCCCCBCCSCTTTTTSTTCCCSC
T ss_pred eeceEEEEc--CcccccccccCCCCcceEecC-------------CCccccCeEEeeeEEEEEEEEcCcccHHHHHHHHH
Confidence 999999873 457999999999999999987 67999999999999999999999999999998876
Q ss_pred hhhccCCCCChhHHHHHHHHHHHHHHHHH-HHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccC
Q 004437 246 HDASLEESDTPLRKKLDEFGNRLTTAIGL-VCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPE 324 (753)
Q Consensus 246 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~ 324 (753)
+. ..+++|+++.++++..+++..+++ ++++++++ ++. ...+| ...+.+++++++++|||
T Consensus 228 ~~---~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~---~~~---~~~~~-----------~~~~~~~v~llv~aiP~ 287 (885)
T 3b8c_A 228 DS---TNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVM---YPI---QRRKY-----------RDGIDNLLVLLIGGIPI 287 (885)
T ss_dssp CS---CSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTT---TTT---TCSCS-----------TTHHHHHHHHTTTTCCS
T ss_pred hc---ccccChHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHH---ccCcH-----------HHHHHHHHHHHHHHhhh
Confidence 54 467899999999998775443222 22222111 111 01122 12466789999999999
Q ss_pred ChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCC
Q 004437 325 GLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPK 404 (753)
Q Consensus 325 ~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 404 (753)
+||++++++++.++.+|+++|+++|+++++|+||++|+||||||||||+|+|+|.+.... .+.+.
T Consensus 288 aLp~~vti~la~g~~r~ak~~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~---------------~~~~~ 352 (885)
T 3b8c_A 288 AMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE---------------VFCKG 352 (885)
T ss_dssp STTTHHHHTTTHHHHHHTTTSCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC---------------SSCSS
T ss_pred HHHHHHHHHHHHHHHHHHhCCeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe---------------ccCCC
Confidence 999999999999999999999999999999999999999999999999999999632100 00000
Q ss_pred CCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccc
Q 004437 405 DGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDS 484 (753)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 484 (753)
....+++.++++|++. ..+||+|.|++.++.+. . .
T Consensus 353 -------------~~~~~ll~~aa~~~~~----------~~~~p~~~Al~~~~~~~---~-~------------------ 387 (885)
T 3b8c_A 353 -------------VEKDQVLLFAAMASRV----------ENQDAIDAAMVGMLADP---K-E------------------ 387 (885)
T ss_dssp -------------TTHHHHHHHHHHHCCS----------SSCCSHHHHHHHTTCCT---T-C------------------
T ss_pred -------------CCHHHHHHHHHHHhCC----------CCCCchHHHHHHHhhch---h-h------------------
Confidence 0014566777888752 14799999998765320 0 0
Q ss_pred cccccccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHH
Q 004437 485 STVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSR 564 (753)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~ 564 (753)
.+..+++++.+||+|.+|+|+++++..+|+.++++||+||.++++|+. +++.++.+.+.
T Consensus 388 ----------~~~~~~~~~~~pF~s~~k~~sv~~~~~~g~~~~~~KGa~e~il~~c~~-----------~~~~~~~~~~~ 446 (885)
T 3b8c_A 388 ----------ARAGIREVHFLPFNPVDKRTALTYIDGSGNWHRVSKGAPEQILELAKA-----------SNDLSKKVLSI 446 (885)
T ss_dssp ----------CCCSSCCBCCCCCCTTTCCCCCBBCSSSSCBCBCCCCSGGGTSSSSCC-----------CSTTTTTHHHH
T ss_pred ----------HhhcCceeecccCCcccceEEEEEEecCCcEEEEEeCCHHHHHHhccC-----------chhhHHHHHHH
Confidence 033466788999999999999999876777889999999999999973 11223456778
Q ss_pred HHHhhhccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeE
Q 004437 565 HLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEV 644 (753)
Q Consensus 565 ~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v 644 (753)
+++|+++|+||+++||+....+ ..+..|++++|+|+++++||+|++++++|++|+++||+|
T Consensus 447 ~~~~a~~G~rvl~vA~~~~~~~-------------------~~~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v 507 (885)
T 3b8c_A 447 IDKYAERGLRSLAVARQVVPEK-------------------TKESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNV 507 (885)
T ss_dssp HHHHTTTTCEEEEECCBCCCSS-------------------SSSCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCC
T ss_pred HHHHHhCCCeEEEEEEeccccc-------------------cccccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcE
Confidence 8899999999999999864321 112347889999999999999999999999999999999
Q ss_pred EEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhc-cCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeE
Q 004437 645 MVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMA-LSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVV 723 (753)
Q Consensus 645 ~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v 723 (753)
+|+|||+..+|.++|+++||.... +....++|.+++. +.+.+..+.+.+ ..+++|++|+||.++|+.+|++|+.|
T Consensus 508 ~MiTGD~~~tA~~iA~~lGi~~~~--~~~~~l~g~~~~~~~~~~~l~~~~~~--~~v~arv~P~~K~~iV~~lq~~g~~V 583 (885)
T 3b8c_A 508 KMITGDQLAIGKETGRRLGMGTNM--YPSSALLGTHKDANLASIPVEELIEK--ADGFAGVFPEHKYEIVKKLQERKHIV 583 (885)
T ss_dssp EEEESSCHHHHTHHHHTTTCTTCC--STTSSCCBGGGGTTSCCSCHHHHHHT--SCCEECCCHHHHHHHHHHHHHTTCCC
T ss_pred EEEcCCChHHHHHHHHHhCCcccc--CCcceeeccccccccchhHHHHHHhh--CcEEEEECHHHHHHHHHHHHHCCCeE
Confidence 999999999999999999996421 1234566766654 444445566666 57999999999999999999999999
Q ss_pred EEEcCCcccHHHhhhcCceEecCCCCccC
Q 004437 724 AMTGDGVNDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 724 ~~~GDg~ND~~~l~~A~vgiamgi~g~~~ 752 (753)
+|+|||.||+|||++||+||||| +|+|+
T Consensus 584 am~GDGvNDapaLk~AdvGIAmg-~gtd~ 611 (885)
T 3b8c_A 584 GMTGDGVNDAPALKKADIGIAVA-DATDA 611 (885)
T ss_dssp CBCCCSSTTHHHHHHSSSCCCCS-SSHHH
T ss_pred EEEcCCchhHHHHHhCCEeEEeC-CccHH
Confidence 99999999999999999999999 99875
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-75 Score=668.29 Aligned_cols=461 Identities=28% Similarity=0.391 Sum_probs=386.7
Q ss_pred ccchhhhh-HHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEe-CCeeeeeecCCCCCCCcEEEecCCCcccccEE
Q 004437 93 EDYVEPLV-IVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLR-DGYLVPDLPAIGLVPGDIVELGVGDKVPADMR 170 (753)
Q Consensus 93 ~~~~~~~~-i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R-~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ 170 (753)
..|++..+ +++++++..+++.+.+.|+.+.+++|.++.+++++++| ||++ ++|++++|+|||+|.|++||+|||||+
T Consensus 185 ~~yfe~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~-~~v~~~~l~~GDiv~v~~Ge~IPaDg~ 263 (736)
T 3rfu_A 185 AVYFEAAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSE-EEVSLDNVAVGDLLRVRPGEKIPVDGE 263 (736)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEE-EEEETTTCCTTCEECCCSSEECCSCEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEE-EEEEHhhCCCCCEEEECCCCcccccEE
Confidence 45777764 55777788888888888888999999999999999888 8888 579999999999999999999999999
Q ss_pred EEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhcc
Q 004437 171 VAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASL 250 (753)
Q Consensus 171 vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~ 250 (753)
|++ |.+.||||+|||||.|+.|.+ ++.+|+||.+.+|.++++|++||.+|.+|++.+.++++
T Consensus 264 vl~---G~~~VDES~LTGES~Pv~K~~-------------gd~v~~Gt~~~~G~~~~~v~~~G~~T~l~~I~~lv~~a-- 325 (736)
T 3rfu_A 264 VQE---GRSFVDESMVTGEPIPVAKEA-------------SAKVIGATINQTGSFVMKALHVGSDTMLARIVQMVSDA-- 325 (736)
T ss_dssp ECS---SCEEEECSSSTTCSSCEEECT-------------TCEECTTCEEESCCCCEEECCCSTTSHHHHHHHHHHHH--
T ss_pred EEE---CceEeeecccCCccccEEecc-------------CCcCCCceEeccceEEEEEEEechhhHHHHHHHHHHHh--
Confidence 986 888999999999999999987 78899999999999999999999999999999999887
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHH
Q 004437 251 EESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVI 330 (753)
Q Consensus 251 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~ 330 (753)
+.+++|+++.+++++.++++++++++++++++++.... ...| ...+.+++++++++|||+|++++
T Consensus 326 ~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~----~~~~-----------~~~l~~ai~vlviacPcaL~la~ 390 (736)
T 3rfu_A 326 QRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGP----QPAL-----------SYGLIAAVSVLIIACPCALGLAT 390 (736)
T ss_dssp HSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS----SSST-----------THHHHHHHHHHHHHCCSTHHHHH
T ss_pred hhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CchH-----------HHHHHHHHHhHHHhhhhHHHHHH
Confidence 67889999999999999999999988887776432110 0112 34678899999999999999999
Q ss_pred HHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCccc
Q 004437 331 TTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVD 410 (753)
Q Consensus 331 ~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (753)
|+++..++.+++++|+++|+++++|+||++|+||||||||||+|+|.|.+++..+. .
T Consensus 391 p~a~~~~~~~~a~~gilvk~~~alE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~---------------~-------- 447 (736)
T 3rfu_A 391 PMSIMVGVGKGAQSGVLIKNAEALERMEKVNTLVVDKTGTLTEGHPKLTRIVTDDF---------------V-------- 447 (736)
T ss_dssp HHHHHHHHHHHHHTTEEESCHHHHHHHTSCCEEEECCBTTTBCSSCEEEEEEESSS---------------C--------
T ss_pred HHHHHHHHHHHhhcceeechHHHHHHhcCCCEEEEeCCCCCcCCceEEEEEEecCC---------------C--------
Confidence 99999999999999999999999999999999999999999999999999873211 0
Q ss_pred CCCCCccHHHHHHHH-HHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhccccccccc
Q 004437 411 WPCYNMDANLQAMAK-ICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRL 489 (753)
Q Consensus 411 ~~~~~~~~~~~~~~~-~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (753)
. .+++. +.+++ ....||.+.|+++++++.|+....
T Consensus 448 ------~---~~~l~~aa~le------------~~s~hPla~Aiv~~a~~~~~~~~~----------------------- 483 (736)
T 3rfu_A 448 ------E---DNALALAAALE------------HQSEHPLANAIVHAAKEKGLSLGS----------------------- 483 (736)
T ss_dssp ------H---HHHHHHHHHHH------------HSSCCHHHHHHHHHHHTTCCCCCC-----------------------
T ss_pred ------H---HHHHHHHHHHh------------hcCCChHHHHHHHHHHhcCCCccC-----------------------
Confidence 0 12222 22332 235699999999999876654321
Q ss_pred ccccccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhh
Q 004437 490 GCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMS 569 (753)
Q Consensus 490 ~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 569 (753)
..+|++..++. +... .+++ .+.+|+++.+.+.+.. ...+.+..++++
T Consensus 484 --------------~~~f~~~~g~g-v~~~-~~g~--~~~~G~~~~~~~~~~~---------------~~~~~~~~~~~~ 530 (736)
T 3rfu_A 484 --------------VEAFEAPTGKG-VVGQ-VDGH--HVAIGNARLMQEHGGD---------------NAPLFEKADELR 530 (736)
T ss_dssp --------------CSCCCCCTTTE-EEEC-SSSS--CEEEESHHHHHHHCCC---------------CHHHHHHHHHHH
T ss_pred --------------cccccccCCce-EEEE-ECCE--EEEEcCHHHHHHcCCC---------------hhHHHHHHHHHH
Confidence 12455444432 2222 2233 3556999988665321 123456678899
Q ss_pred hccceEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcC
Q 004437 570 SKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITG 649 (753)
Q Consensus 570 ~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TG 649 (753)
.+|+|++++|+ |.+++|+++++|++|++++++|++|+++|++++|+||
T Consensus 531 ~~G~~vl~va~--------------------------------d~~~~G~i~i~D~i~~~~~~aI~~L~~~Gi~v~mlTG 578 (736)
T 3rfu_A 531 GKGASVMFMAV--------------------------------DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTG 578 (736)
T ss_dssp HTTCEEEEEEE--------------------------------TTEEEEEEEEECCBCSSHHHHHHHHHHHTCEEEEECS
T ss_pred hcCCeEEEEEE--------------------------------CCEEEEEEEeeccchhhHHHHHHHHHHCCCeEEEECC
Confidence 99999999997 3478999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCC
Q 004437 650 DNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDG 729 (753)
Q Consensus 650 d~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg 729 (753)
|+..+|..+|+++|| ..++++++|++|.++|+.++++|+.|+|+|||
T Consensus 579 d~~~~a~~ia~~lgi---------------------------------~~v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG 625 (736)
T 3rfu_A 579 DSKRTAEAVAGTLGI---------------------------------KKVVAEIMPEDKSRIVSELKDKGLIVAMAGDG 625 (736)
T ss_dssp SCHHHHHHHHHHHTC---------------------------------CCEECSCCHHHHHHHHHHHHHHSCCEEEEECS
T ss_pred CCHHHHHHHHHHcCC---------------------------------CEEEEecCHHHHHHHHHHHHhcCCEEEEEECC
Confidence 999999999999999 46999999999999999999999999999999
Q ss_pred cccHHHhhhcCceEecCCCCccCC
Q 004437 730 VNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 730 ~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
.||+|||++||+||||| +|+|++
T Consensus 626 ~ND~paL~~AdvGIAmg-~g~d~a 648 (736)
T 3rfu_A 626 VNDAPALAKADIGIAMG-TGTDVA 648 (736)
T ss_dssp STTHHHHHHSSEEEEES-SSCSHH
T ss_pred hHhHHHHHhCCEEEEeC-CccHHH
Confidence 99999999999999999 998853
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-73 Score=646.72 Aligned_cols=455 Identities=26% Similarity=0.388 Sum_probs=377.4
Q ss_pred chh-hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEE
Q 004437 95 YVE-PLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAA 173 (753)
Q Consensus 95 ~~~-~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~ 173 (753)
|++ +..+++++.+..+++.+.++|+++.++++.++.+++++|+|||++ ++|++++|+|||+|.|++||+|||||+|++
T Consensus 95 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~-~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~ 173 (645)
T 3j08_A 95 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKE-IAVPVEEVAVGDIVIVRPGEKIPVDGVVVE 173 (645)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEE-EEEEGGGCCTTCEEEECTTCBCCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEE-EEEEHHHCCCCCEEEECCCCEEeeEEEEEE
Confidence 444 445556666777777777777778889999999999999999999 569999999999999999999999999998
Q ss_pred eeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCC
Q 004437 174 LKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEES 253 (753)
Q Consensus 174 ~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~ 253 (753)
|.+.||||+|||||.|+.|.+ ++.+|+||.+.+|.+.++|++||.+|.+|++.+.++++ +.+
T Consensus 174 ---G~~~VdeS~LTGES~Pv~K~~-------------g~~v~~Gt~~~~g~~~~~v~~~G~~T~l~~i~~lv~~a--~~~ 235 (645)
T 3j08_A 174 ---GESYVDESMISGEPVPVLKSK-------------GDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDA--MGS 235 (645)
T ss_dssp ---CCEEEECHHHHCCSSCEEECT-------------TCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSCC--CCC
T ss_pred ---CcEEEEcccccCCCCceecCC-------------CCEeeccEEEecCcEEEEEEEcCCccHHHHHHHHHHHh--hcc
Confidence 889999999999999999987 78999999999999999999999999999999999876 678
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHH
Q 004437 254 DTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTC 333 (753)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~ 333 (753)
++|+++.+++++.++++++++++++++++++.. ...+|. ..+..++++++++|||+|++++|++
T Consensus 236 k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~-----~~~~~~-----------~~~~~~i~vlvia~P~aL~la~p~a 299 (645)
T 3j08_A 236 KPPIQRLADKVVAYFIPTVLLVAISAFIYWYFI-----AHAPLL-----------FAFTTLIAVLVVACPCAFGLATPTA 299 (645)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCC-----CSCSCC-----------CTTTTTHHHHHHHSCTTHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCcHH-----------HHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 899999999999999999888888877653211 011121 1244578899999999999999999
Q ss_pred HHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCC
Q 004437 334 LALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPC 413 (753)
Q Consensus 334 ~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (753)
+..++.+++++|+++|+++++|+||++|++|||||||||+|+|+|.+++..+..
T Consensus 300 ~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~~~~~v~~~~~~~~~-------------------------- 353 (645)
T 3j08_A 300 LTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD-------------------------- 353 (645)
T ss_dssp HHHHHHHHHTTCCCCSSTTHHHHGGGCCEEEEEGGGTSSSSCCEEEEEEESSSC--------------------------
T ss_pred HHHHHHHHHHCCeEecCchHHHHhhCCCEEEEcCcccccCCCeEEEEEEeCCCC--------------------------
Confidence 999999999999999999999999999999999999999999999998764310
Q ss_pred CCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhccccccccccccc
Q 004437 414 YNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCE 493 (753)
Q Consensus 414 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (753)
..+++..++.+. ....||++.|++.++++.|+......+
T Consensus 354 ------~~~~l~~aa~~e-----------~~s~hPla~Aiv~~a~~~g~~~~~~~~------------------------ 392 (645)
T 3j08_A 354 ------ERELLRLAAIAE-----------RRSEHPIAEAIVKKALEHGIELGEPEK------------------------ 392 (645)
T ss_dssp ------HHHHHHHHHHHH-----------TTCCSHHHHHHHHHHHHTTCCCCSCCC------------------------
T ss_pred ------HHHHHHHHHHHh-----------hcCCChhHHHHHHHHHhcCCCcCCccc------------------------
Confidence 123444444443 234699999999999987765432110
Q ss_pred ccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccc
Q 004437 494 WWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGL 573 (753)
Q Consensus 494 ~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~ 573 (753)
....+ .+. +.. ..+.+|+++.+.+... +.. +.+....+++..+|+
T Consensus 393 --------~~~~~----g~g--~~~-------~~v~~g~~~~~~~~~~----------~~~----~~~~~~~~~~~~~g~ 437 (645)
T 3j08_A 393 --------VEVIA----GEG--VVA-------DGILVGNKRLMEDFGV----------AVS----NEVELALEKLEREAK 437 (645)
T ss_dssp --------CEEET----TTE--EEE-------TTEEEECHHHHHHTTC----------CCC----HHHHHHHHHHHTTTC
T ss_pred --------eEEec----CCc--eEE-------EEEEECCHHHHHhcCC----------Ccc----HHHHHHHHHHHhcCC
Confidence 00011 001 100 1245688877755321 122 345667788999999
Q ss_pred eEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChH
Q 004437 574 RCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKS 653 (753)
Q Consensus 574 rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~ 653 (753)
|++.+|+ |++++|+++++|++|++++++|++|+++|++++|+|||+..
T Consensus 438 ~~l~va~--------------------------------~~~~~G~i~~~D~l~~~~~~~i~~L~~~Gi~v~~~TGd~~~ 485 (645)
T 3j08_A 438 TAVIVAR--------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWR 485 (645)
T ss_dssp CCEEEEE--------------------------------TTEEEEEEEEECCCTTTHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred eEEEEEE--------------------------------CCEEEEEEEecCCchhHHHHHHHHHHHCCCEEEEEeCCCHH
Confidence 9999986 45799999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccH
Q 004437 654 TAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDA 733 (753)
Q Consensus 654 ~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~ 733 (753)
+|..+|+++|+ ..++++.+|++|..+++.++++ +.|+|+|||.||+
T Consensus 486 ~a~~ia~~lgi---------------------------------~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~ 531 (645)
T 3j08_A 486 SAEAISRELNL---------------------------------DLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDA 531 (645)
T ss_dssp HHHHHHHHHTC---------------------------------SEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCH
T ss_pred HHHHHHHHcCC---------------------------------CEEEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHH
Confidence 99999999999 4799999999999999999988 8999999999999
Q ss_pred HHhhhcCceEecCCCCccCC
Q 004437 734 PALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 734 ~~l~~A~vgiamgi~g~~~~ 753 (753)
|||+.||+||||| +|+|++
T Consensus 532 ~al~~A~vgiamg-~g~~~a 550 (645)
T 3j08_A 532 PALAQADLGIAVG-SGSDVA 550 (645)
T ss_dssp HHHHHSSEEEEEC-CCSCCS
T ss_pred HHHHhCCEEEEeC-CCcHHH
Confidence 9999999999999 998864
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-72 Score=651.99 Aligned_cols=455 Identities=26% Similarity=0.386 Sum_probs=378.1
Q ss_pred chh-hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEE
Q 004437 95 YVE-PLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAA 173 (753)
Q Consensus 95 ~~~-~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~ 173 (753)
|++ +..+++++++..+++.+.++|+++.++++.++.+++++|+|||++ ++|++++|+|||+|.|++||+|||||+|++
T Consensus 173 ~~~~~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~-~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl~ 251 (723)
T 3j09_A 173 FYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKE-IAVPVEEVAVGDIVIVRPGEKIPVDGVVVE 251 (723)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEE-EEEEGGGCCTTCEEEECTTCBCCSEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEE-EEEEHHHCCCCCEEEECCCCEEeeEEEEEE
Confidence 444 444556666777777777777778899999999999999999999 569999999999999999999999999997
Q ss_pred eeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhhccCCC
Q 004437 174 LKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDASLEES 253 (753)
Q Consensus 174 ~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~~~~~~ 253 (753)
|.+.||||+|||||.|+.|.+ ++.+|+||.+.+|.+.++|++||.+|.+|++.+.++++ +.+
T Consensus 252 ---G~~~VdeS~LTGES~pv~K~~-------------g~~v~~Gt~~~~g~~~~~v~~~g~~T~l~~i~~lv~~a--~~~ 313 (723)
T 3j09_A 252 ---GESYVDESMISGEPVPVLKSK-------------GDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDA--MGS 313 (723)
T ss_dssp ---CCEEEECHHHHCCSSCEEECT-------------TCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHSSS--CCS
T ss_pred ---CCeEEecccccCCCcceeecC-------------CCeeccceEEecCcEEEEEEEecCccHHHHHHHHHHHh--hcc
Confidence 889999999999999999987 78999999999999999999999999999999999876 678
Q ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccCChhHHHHHH
Q 004437 254 DTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTC 333 (753)
Q Consensus 254 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~~L~~~~~~~ 333 (753)
++|+++.+++++.++++++++++++++++++.. ...+| ...+..++++++++|||+|++++|++
T Consensus 314 k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~-----~~~~~-----------~~~~~~~i~vlvia~P~aL~la~p~a 377 (723)
T 3j09_A 314 KPPIQRLADKVVAYFIPTVLLVAISAFIYWYFI-----AHAPL-----------LFAFTTLIAVLVVACPCAFGLATPTA 377 (723)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSS-----TTCTT-----------CCSHHHHHHHHHHHSCTTHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCcH-----------HHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 999999999999999999888888776652211 01112 12366789999999999999999999
Q ss_pred HHHHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCC
Q 004437 334 LALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPC 413 (753)
Q Consensus 334 ~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (753)
+..++.+++++|+++|+++++|+||++|++|||||||||+|+|+|.+++..+..
T Consensus 378 ~~~~~~~~a~~gilvk~~~~lE~lg~v~~i~fDKTGTLT~g~~~v~~~~~~~~~-------------------------- 431 (723)
T 3j09_A 378 LTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGD-------------------------- 431 (723)
T ss_dssp HHHHHHHHHTTTCEESSTTHHHHGGGCCEEEEEHHHHTSCSCCEEEEEEESSSC--------------------------
T ss_pred HHHHHHHHHHCCeEEeChHHHHHhhcCCEEEEcCCCccccCceEEEEEEeCCCC--------------------------
Confidence 999999999999999999999999999999999999999999999998764310
Q ss_pred CCccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhccccccccccccc
Q 004437 414 YNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCE 493 (753)
Q Consensus 414 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (753)
..+++..++.+. ....||++.|+++++.+.|+......+
T Consensus 432 ------~~~~l~~aa~~e-----------~~s~hP~~~Ai~~~a~~~~~~~~~~~~------------------------ 470 (723)
T 3j09_A 432 ------ERELLRLAAIAE-----------RRSEHPIAEAIVKKALEHGIELGEPEK------------------------ 470 (723)
T ss_dssp ------HHHHHHHHHHHH-----------TTCCSHHHHHHHHHHHHTTCCCCSCCC------------------------
T ss_pred ------HHHHHHHHHHHh-----------ccCCCchhHHHHHHHHhcCCCcCCccc------------------------
Confidence 123344444433 234699999999999887765432110
Q ss_pred ccccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccc
Q 004437 494 WWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGL 573 (753)
Q Consensus 494 ~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~ 573 (753)
....+- +. +.. ..+.+|+++.+.+... +.. +.+....+++..+|+
T Consensus 471 --------~~~~~g----~g--~~~-------~~~~~g~~~~~~~~~~----------~~~----~~~~~~~~~~~~~g~ 515 (723)
T 3j09_A 471 --------VEVIAG----EG--VVA-------DGILVGNKRLMEDFGV----------AVS----NEVELALEKLEREAK 515 (723)
T ss_dssp --------CEEETT----TE--EEE-------TTEEEECHHHHHHTTC----------CCC----HHHHHHHHHHHTTTC
T ss_pred --------eEEecC----Cc--eEE-------EEEEECCHHHHHhcCC----------Ccc----HHHHHHHHHHHhcCC
Confidence 000110 01 100 1245688877755421 122 345667788999999
Q ss_pred eEEEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChH
Q 004437 574 RCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKS 653 (753)
Q Consensus 574 rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~ 653 (753)
|++.+|+ |++++|+++++|++|++++++|++|+++|++++|+|||+..
T Consensus 516 ~~~~va~--------------------------------~~~~~G~i~i~D~~~~~~~~~i~~l~~~Gi~v~~~TGd~~~ 563 (723)
T 3j09_A 516 TAVIVAR--------------------------------NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWR 563 (723)
T ss_dssp EEEEEEE--------------------------------TTEEEEEEEEECCSCTTHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred eEEEEEE--------------------------------CCEEEEEEeecCCcchhHHHHHHHHHHCCCEEEEECCCCHH
Confidence 9999986 45899999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccH
Q 004437 654 TAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDA 733 (753)
Q Consensus 654 ~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~ 733 (753)
+|..+|+++|+ ..++++.+|++|..+++.++++ +.|+|+|||.||+
T Consensus 564 ~a~~ia~~lgi---------------------------------~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~ 609 (723)
T 3j09_A 564 SAEAISRELNL---------------------------------DLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDA 609 (723)
T ss_dssp HHHHHHHHHTC---------------------------------SEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTH
T ss_pred HHHHHHHHcCC---------------------------------cEEEccCCHHHHHHHHHHHhcC-CeEEEEECChhhH
Confidence 99999999999 4799999999999999999988 8999999999999
Q ss_pred HHhhhcCceEecCCCCccCC
Q 004437 734 PALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 734 ~~l~~A~vgiamgi~g~~~~ 753 (753)
|||++||+||||| +|+|++
T Consensus 610 ~al~~A~vgiamg-~g~~~a 628 (723)
T 3j09_A 610 PALAQADLGIAVG-SGSDVA 628 (723)
T ss_dssp HHHHHSSEEEECC-CCSCCS
T ss_pred HHHhhCCEEEEeC-CCcHHH
Confidence 9999999999999 999864
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.94 E-value=5.4e-27 Score=203.44 Aligned_cols=110 Identities=31% Similarity=0.447 Sum_probs=103.1
Q ss_pred HHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCcccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCc
Q 004437 122 ALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVF 201 (753)
Q Consensus 122 ~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~ 201 (753)
++++|.++.+.+++|+|+|++ ++|++++|+|||+|.|++||+|||||+|++ |.+.||||+|||||.|+.|.+
T Consensus 2 al~~L~~l~p~~a~v~r~g~~-~~i~~~~l~~GDiv~v~~G~~iPaDg~v~~---g~~~vdeS~LTGEs~pv~k~~---- 73 (113)
T 2hc8_A 2 AIKKLVGLQAKTAVVIRDGKE-IAVPVEEVAVGDIVIVRPGEKIPVDGVVVE---GESYVDESMISGEPVPVLKSK---- 73 (113)
T ss_dssp HHHHHHHHSCSEEEEEETTEE-EEEEGGGCCTTCEEEECTTCBCCSEEEEEE---CCEEEECHHHHCCSSCEEECT----
T ss_pred HHHHHhcCCCCEEEEEECCEE-EEEEHHHCCCCCEEEECCCCEEeeeEEEEE---ceEEEEccccCCCCccEEECC----
Confidence 467788888999999999999 469999999999999999999999999998 779999999999999999987
Q ss_pred CCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhh
Q 004437 202 LDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDA 248 (753)
Q Consensus 202 ~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~ 248 (753)
++.+|+||.+.+|.+.++|++||.+|.+|++.++++++
T Consensus 74 ---------g~~v~aGt~~~~G~~~~~V~~~g~~T~~~~i~~lv~~a 111 (113)
T 2hc8_A 74 ---------GDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDA 111 (113)
T ss_dssp ---------TCEECTTCEECSSCEEEEEEECGGGSHHHHHHHHHHHH
T ss_pred ---------CCEEEeCCEEeeceEEEEEEEecCcCHHHHHHHHHHHh
Confidence 78999999999999999999999999999999998765
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-26 Score=203.21 Aligned_cols=116 Identities=28% Similarity=0.385 Sum_probs=103.9
Q ss_pred hhHHHHHHHHHHhhcccccEEEeCCe------eeeeecCCCCCCCcEEEecCCCcccccEEEEEeeCCcEEEEcccccCC
Q 004437 116 ESNAEKALEALKKIQCESGKVLRDGY------LVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGE 189 (753)
Q Consensus 116 e~~~~~~~~~l~~~~~~~~~V~R~g~------~~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s~~~~Vdes~ltGE 189 (753)
++|+.+.+++|.++.+.+++|+|+|+ + +.|++++|+|||+|.|++||+|||||+|++ |...||||+||||
T Consensus 2 ~~ka~~~l~~L~~l~p~~a~v~r~g~~~~~~~~-~~v~~~~l~~GDiv~v~~G~~iPaDg~vi~---g~~~vdeS~LTGE 77 (124)
T 2kij_A 2 SFTMSEALAKLISLQATEATIVTLDSDNILLSE-EQVDVELVQRGDIIKVVPGGKFPVDGRVIE---GHSMVDESLITGE 77 (124)
T ss_dssp ----CCHHHHHHHTCCSEEEEEECSSSTTCCEE-EEEETTTCCTTCEEECCTTCBCSSCEEECS---CCCEEECTTTTCC
T ss_pred hHHHHHHHHHHhccCCCEEEEEECCCCCceeEE-EEEeHHHCCCCCEEEECCCCEEEeeEEEEE---ccEEEEeccccCC
Confidence 45777889999999999999999764 4 469999999999999999999999999987 6679999999999
Q ss_pred CCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHHHhhh
Q 004437 190 AMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQIHDA 248 (753)
Q Consensus 190 s~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~~~~ 248 (753)
|.|+.|.+ ++.+|+||.+.+|.+.++|++||.+|.+|++.++++++
T Consensus 78 s~pv~k~~-------------g~~v~aGt~~~~G~~~~~v~~~g~~T~~~~I~~lv~~a 123 (124)
T 2kij_A 78 AMPVAKKP-------------GSTVIAGSINQNGSLLICATHVGADTTLSQIVKLVEEA 123 (124)
T ss_dssp SSCEECCT-------------TEEECTTCEEESSCCEEEECSCTTTCHHHHHHHHTTTT
T ss_pred CccEEeCC-------------CCEEEcCCEEeeeEEEEEEEEecccCHHHHHHHHHHhh
Confidence 99999987 78999999999999999999999999999999988654
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.4e-26 Score=236.90 Aligned_cols=105 Identities=30% Similarity=0.610 Sum_probs=97.0
Q ss_pred eEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHH
Q 004437 614 LVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEAL 693 (753)
Q Consensus 614 l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (753)
..+.|.+.+.|+++|++.++|+.|+++|++++|+||++...+..+++++|+.
T Consensus 125 ~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~---------------------------- 176 (263)
T 2yj3_A 125 GEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ---------------------------- 176 (263)
Confidence 4578999999999999999999999999999999999999999999999983
Q ss_pred HhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccC
Q 004437 694 SKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 694 ~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~ 752 (753)
.+|....|+.|..+++.++..++.|+|+|||.||++|++.||+|++|| ++++.
T Consensus 177 -----~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~~Agv~va~g-~~~~~ 229 (263)
T 2yj3_A 177 -----EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALALADVSVAMG-NGVDI 229 (263)
Confidence 466777799999999999988899999999999999999999999999 77654
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-21 Score=203.89 Aligned_cols=247 Identities=27% Similarity=0.412 Sum_probs=179.4
Q ss_pred HHHHHHhccccccccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCCCC
Q 004437 336 LGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYN 415 (753)
Q Consensus 336 ~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (753)
-+.++++++|+++|++.++|.++++++||||||||||.+.+.+..++..+. +
T Consensus 8 ~~~~~~~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----------------~------------ 59 (287)
T 3a1c_A 8 HGSRKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----------------D------------ 59 (287)
T ss_dssp ------CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS----------------C------------
T ss_pred hhHHHHHHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC----------------C------------
Confidence 367889999999999999999999999999999999999999998775421 0
Q ss_pred ccHHHHHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhccccccccccccccc
Q 004437 416 MDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWW 495 (753)
Q Consensus 416 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (753)
. ..++..++... ....||.+.|+..++++.|++......
T Consensus 60 -~---~~~l~~~~~~e-----------~~s~hp~~~a~~~~~~~~g~~~~~~~~-------------------------- 98 (287)
T 3a1c_A 60 -E---RELLRLAAIAE-----------RRSEHPIAEAIVKKALEHGIELGEPEK-------------------------- 98 (287)
T ss_dssp -H---HHHHHHHHHHT-----------TTCCSHHHHHHHHHHHHTTCCCCCCSC--------------------------
T ss_pred -H---HHHHHHHHHHh-----------hcCCCHHHHHHHHHHHhcCCCcccccc--------------------------
Confidence 1 12222222111 234699999999999888865321100
Q ss_pred ccccceeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceE
Q 004437 496 TKRSKRVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRC 575 (753)
Q Consensus 496 ~~~~~~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rv 575 (753)
...++ .. ++.. ..+.+|+++.+.+.+. +++ +.+......+..+|.++
T Consensus 99 ------~~~~~----G~--~~~~-------~~~~~g~~~~~~~~~~----------~~~----~~~~~~~~~~~~~g~~~ 145 (287)
T 3a1c_A 99 ------VEVIA----GE--GVVA-------DGILVGNKRLMEDFGV----------AVS----NEVELALEKLEREAKTA 145 (287)
T ss_dssp ------EEEET----TT--EEEE-------TTEEEECHHHHHHTTC----------CCC----HHHHHHHHHHHHTTCEE
T ss_pred ------ceeec----CC--CeEE-------EEEEECCHHHHHhcCC----------Ccc----HHHHHHHHHHHhCCCeE
Confidence 00000 00 0000 1133466655433211 111 12334556778899999
Q ss_pred EEEEEeccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHH
Q 004437 576 LGMAYKDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTA 655 (753)
Q Consensus 576 l~~A~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a 655 (753)
+++++. ..+.+.+...++++|++.++|+.|+++|+++.++||++...+
T Consensus 146 i~~~~d--------------------------------~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~ 193 (287)
T 3a1c_A 146 VIVARN--------------------------------GRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSA 193 (287)
T ss_dssp EEEEET--------------------------------TEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHH
T ss_pred EEEEEC--------------------------------CEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHH
Confidence 998862 357888889999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHH
Q 004437 656 EAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPA 735 (753)
Q Consensus 656 ~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~ 735 (753)
..+++.+|+ ..+|....|..|...++.++.. +.++||||+.||++|
T Consensus 194 ~~~l~~~gl---------------------------------~~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~ 239 (287)
T 3a1c_A 194 EAISRELNL---------------------------------DLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPA 239 (287)
T ss_dssp HHHHHHHTC---------------------------------SEEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHH
T ss_pred HHHHHHhCC---------------------------------ceeeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHH
Confidence 999999998 3566777799999999999888 999999999999999
Q ss_pred hhhcCceEecCCCCcc
Q 004437 736 LKLADIGVAMGITGTE 751 (753)
Q Consensus 736 l~~A~vgiamgi~g~~ 751 (753)
.+.||++|+|| ++.+
T Consensus 240 a~~ag~~v~~~-~~~~ 254 (287)
T 3a1c_A 240 LAQADLGIAVG-SGSD 254 (287)
T ss_dssp HHHSSEEEEEC-CCSC
T ss_pred HHHCCeeEEeC-CCCH
Confidence 99999999999 7654
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=7.6e-19 Score=181.53 Aligned_cols=236 Identities=30% Similarity=0.405 Sum_probs=167.7
Q ss_pred cccchhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCCCCccHHHHHHHHHH
Q 004437 348 VRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKIC 427 (753)
Q Consensus 348 vk~~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (753)
+|+++++|.+++++.||||++||||.|+|+|..+...+.. . ..+...+
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~~-----------------------------~---~~~~~~~ 48 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNHS-----------------------------E---DELLQIA 48 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSSC-----------------------------H---HHHHHHH
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCCC-----------------------------H---HHHHHHH
Confidence 5789999999999999999999999999999998764320 1 2223332
Q ss_pred hhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecC
Q 004437 428 AVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEF 507 (753)
Q Consensus 428 ~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F 507 (753)
+.+. ....+|...++...++..|....... .+..++
T Consensus 49 ~~~~-----------~~s~~~~~~a~~~~~~~~g~~~~~~~--------------------------------~~~~~~- 84 (280)
T 3skx_A 49 ASLE-----------ARSEHPIAAAIVEEAEKRGFGLTEVE--------------------------------EFRAIP- 84 (280)
T ss_dssp HHHH-----------TTCCSHHHHHHHHHHHHTTCCCCCCE--------------------------------EEEEET-
T ss_pred HHhh-----------ccCCCHHHHHHHHHHHhcCCCCCCcc--------------------------------ceeecC-
Confidence 2221 12347788888888888776542210 001111
Q ss_pred CCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEecccccc
Q 004437 508 DRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEF 587 (753)
Q Consensus 508 ~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~ 587 (753)
.......+ ++. .+..|.++.+...... .. .....+...+.+++.+++
T Consensus 85 ---g~~~~~~~---~~~--~~~~~~~~~~~~~~~~----------~~--------~~~~~~~~~~~~~~~~~~------- 131 (280)
T 3skx_A 85 ---GKGVEGIV---NGR--RYMVVSPGYIRELGIK----------TD--------ESVEKLKQQGKTVVFILK------- 131 (280)
T ss_dssp ---TTEEEEEE---TTE--EEEEECHHHHHHTTCC----------CC--------TTHHHHHTTTCEEEEEEE-------
T ss_pred ---CCEEEEEE---CCE--EEEEecHHHHHHcCCC----------ch--------HHHHHHHhCCCeEEEEEE-------
Confidence 11122222 111 2234676666554321 11 123455667777776654
Q ss_pred ccccccCcccccccCCCcccccCCCCeEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCC
Q 004437 588 SDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSG 667 (753)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~ 667 (753)
+..++|.+.+.+++++++.++++.|++.|+++.++||++...+..+++.+|+
T Consensus 132 -------------------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl--- 183 (280)
T 3skx_A 132 -------------------------NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGL--- 183 (280)
T ss_dssp -------------------------TTEEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTC---
T ss_pred -------------------------CCEEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCC---
Confidence 3367899999999999999999999999999999999999999999999998
Q ss_pred CCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCC
Q 004437 668 NEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGI 747 (753)
Q Consensus 668 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi 747 (753)
...|....|.+|...++.+.+.. .++||||+.||++|++.||+||+||
T Consensus 184 ------------------------------~~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~Ag~~va~~- 231 (280)
T 3skx_A 184 ------------------------------DDYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQADVGIAIG- 231 (280)
T ss_dssp ------------------------------SEEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHHSSEEEECS-
T ss_pred ------------------------------hhHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHhCCceEEec-
Confidence 45778888999999999988775 6799999999999999999999999
Q ss_pred CCccC
Q 004437 748 TGTEV 752 (753)
Q Consensus 748 ~g~~~ 752 (753)
++.+.
T Consensus 232 ~~~~~ 236 (280)
T 3skx_A 232 AGTDV 236 (280)
T ss_dssp CCSSS
T ss_pred CCcHH
Confidence 87753
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.82 E-value=3e-20 Score=174.60 Aligned_cols=150 Identities=24% Similarity=0.311 Sum_probs=116.2
Q ss_pred HHHHHHHhhccCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccc
Q 004437 421 QAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSK 500 (753)
Q Consensus 421 ~~~~~~~~~c~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 500 (753)
..++..+.+|+... ...++|+|.|++.++...+.. .....++
T Consensus 16 ~~vl~~a~L~s~~~--------~~~~n~~d~Ail~~~~~~~~~------------------------------~~~~~~~ 57 (170)
T 3gwi_A 16 ERVLHSAWLNSHYQ--------TGLKNLLDTAVLEGTDEESAR------------------------------SLASRWQ 57 (170)
T ss_dssp HHHHHHHHHHHHHC--------CSCCCHHHHHHHHTSCHHHHH------------------------------HHHHHSE
T ss_pred HHHHHHHHHcCCCC--------CCCCChHHHHHHHHHHhcChh------------------------------hhhhcCe
Confidence 45566666665211 124699999998875321100 0145688
Q ss_pred eeeeecCCCCCceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEE
Q 004437 501 RVATLEFDRIRKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAY 580 (753)
Q Consensus 501 ~~~~~~F~s~~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~ 580 (753)
++.++||+|.||||+++++..++.+++|+|||||.|+++|+.+. .+|...|++++.++.+.+.+++|+++|+|||++||
T Consensus 58 ~~~eiPFds~rKrmsvv~~~~~g~~~l~~KGApE~IL~~C~~~~-~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~ 136 (170)
T 3gwi_A 58 KIDEIPFDFERRRMSVVVAENTEHHQLVCKGALQEILNVCSQVR-HNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVAT 136 (170)
T ss_dssp EEEEECCCTTTCEEEEEEESSSSEEEEEEEECHHHHHTTEEEEE-ETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred EEeeEecCcccCcEEEEEEeCCCCEEEEEcCCcHHHHHHhHHHh-cCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEE
Confidence 99999999999999999998778889999999999999999875 48889999999999999999999999999999999
Q ss_pred eccccccccccccCcccccccCCCcccccCCCCeEEEEEccccCC
Q 004437 581 KDELGEFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDP 625 (753)
Q Consensus 581 k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~ 625 (753)
|..+..... .....|+||+|+|++||-|.
T Consensus 137 k~~~~~~~~----------------~~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 137 KYLPAREGD----------------YQRADESDLILEGYIAFLDH 165 (170)
T ss_dssp EEEECCSSC----------------CCGGGSCSEEEEEEEEEEC-
T ss_pred EECCCCccc----------------cCccccCCcEEEehhccccc
Confidence 985432110 11234899999999999875
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.32 E-value=2.5e-13 Score=141.29 Aligned_cols=121 Identities=12% Similarity=0.109 Sum_probs=89.8
Q ss_pred cccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccc--hhhhccCHHHHHHHHHhcCC
Q 004437 621 GLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTG--KEFMALSSTQQIEALSKHGG 698 (753)
Q Consensus 621 ~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 698 (753)
...+++||+++++++.|+++|++++|+||+...++.++++++|+......+....+.. +.+..- ......
T Consensus 137 ~~~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~i~~n~l~~~~~~~~~~--------~~~~~i 208 (297)
T 4fe3_A 137 DSDVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVLKG--------FKGELI 208 (297)
T ss_dssp TSCCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEEEEEECEEECTTSBEEE--------ECSSCC
T ss_pred hcCCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccceEEeeeEEEcccceeEe--------cccccc
Confidence 3457999999999999999999999999999999999999999875433222211111 100000 000002
Q ss_pred eEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHh---hhcCceEecCCCC
Q 004437 699 KVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPAL---KLADIGVAMGITG 749 (753)
Q Consensus 699 ~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l---~~A~vgiamgi~g 749 (753)
..+++..|.+|...+..+++.++.|+|+|||.||+||+ ..||+|||||.-+
T Consensus 209 ~~~~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgiaiGfl~ 262 (297)
T 4fe3_A 209 HVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHILKIGYLN 262 (297)
T ss_dssp CTTCHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEEEEEEEC
T ss_pred chhhcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEEEEEecc
Confidence 34556667788888888988899999999999999995 4999999999533
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=98.99 E-value=1.6e-09 Score=107.47 Aligned_cols=128 Identities=17% Similarity=0.133 Sum_probs=86.3
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccc---cchhh-hc---------------
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSF---TGKEF-MA--------------- 683 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~---~~~~~-~~--------------- 683 (753)
...+.+++.++|++|+++|++++++|||+...+..+++++|+..+.....+..+ .++.+ ..
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l~~~~~i~~~~~~ 99 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 99 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccHHHHHHHHHHHHH
Confidence 345789999999999999999999999999999999999998642111111111 12211 00
Q ss_pred ----------------------cCHHHHHHHHHhcCCeEE-----EeeCc--hhHHHHHHHHHHc----CCeEEEEcCCc
Q 004437 684 ----------------------LSSTQQIEALSKHGGKVF-----SRAEP--RHKQEIVRMLKEM----GEVVAMTGDGV 730 (753)
Q Consensus 684 ----------------------~~~~~~~~~~~~~~~~v~-----~~~~p--~~K~~~v~~l~~~----~~~v~~~GDg~ 730 (753)
...+...++....+..+. ....| ..|...++.+.+. .+.++++||+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~~iGD~~ 179 (227)
T 1l6r_A 100 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 179 (227)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred hcCCccccccceecccceEEecCCHHHHHHHHHhcCEEEEecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEEEECCcH
Confidence 011111122111111221 22335 5799999888765 35799999999
Q ss_pred ccHHHhhhcCceEecCCCCcc
Q 004437 731 NDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 731 ND~~~l~~A~vgiamgi~g~~ 751 (753)
||.+|++.|++||||| ||.+
T Consensus 180 nD~~m~~~ag~~va~~-n~~~ 199 (227)
T 1l6r_A 180 NDMPMFQLPVRKACPA-NATD 199 (227)
T ss_dssp GGHHHHTSSSEEEECT-TSCH
T ss_pred HhHHHHHHcCceEEec-CchH
Confidence 9999999999999999 8865
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.94 E-value=5.5e-10 Score=104.66 Aligned_cols=94 Identities=17% Similarity=0.147 Sum_probs=74.9
Q ss_pred eEEEEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHH--HcCCCCCCCccccccccchhhhccCHHHHHH
Q 004437 614 LVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICR--QIKLFSGNEDLTGRSFTGKEFMALSSTQQIE 691 (753)
Q Consensus 614 l~~lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~--~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (753)
...++.+.++|. .+|+.|+++|+++.++||+ ..+..+++ .+|+
T Consensus 31 g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi--------------------------- 75 (168)
T 3ewi_A 31 QKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDC--------------------------- 75 (168)
T ss_dssp CCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCC---------------------------
T ss_pred CCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCc---------------------------
Confidence 356777777776 3899999999999999999 67788888 5565
Q ss_pred HHHhcCCeEEEeeCchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecCCCCccC
Q 004437 692 ALSKHGGKVFSRAEPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 692 ~~~~~~~~v~~~~~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~ 752 (753)
. ++. .+.+|...++.+.++ .+.++|+||+.||++|++.|++++||+ |+.+.
T Consensus 76 ------~-~~~--g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~~~~~ag~~~a~~-na~~~ 130 (168)
T 3ewi_A 76 ------K-TEV--SVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEECLKRVGLSAVPA-DACSG 130 (168)
T ss_dssp ------C-EEC--SCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHHHHHHSSEEEECT-TCCHH
T ss_pred ------E-EEE--CCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHHHHHHCCCEEEeC-ChhHH
Confidence 2 221 245688888777654 468999999999999999999999999 88753
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.88 E-value=2e-09 Score=103.82 Aligned_cols=85 Identities=19% Similarity=0.296 Sum_probs=70.4
Q ss_pred HHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHH
Q 004437 631 DKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQ 710 (753)
Q Consensus 631 ~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~ 710 (753)
..+|+.|+++|+++.++||++...+..+++++|+. .++... ..|.
T Consensus 58 ~~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~---------------------------------~~~~~~--k~k~ 102 (195)
T 3n07_A 58 GYGVKALMNAGIEIAIITGRRSQIVENRMKALGIS---------------------------------LIYQGQ--DDKV 102 (195)
T ss_dssp HHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCC---------------------------------EEECSC--SSHH
T ss_pred HHHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCc---------------------------------EEeeCC--CCcH
Confidence 34699999999999999999999999999999984 344333 4566
Q ss_pred HHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 711 EIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 711 ~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
..++.+.+. ...++++||+.||++|++.|+++++|+ |+.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~~-na~~ 146 (195)
T 3n07_A 103 QAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCVA-DGHP 146 (195)
T ss_dssp HHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCH
T ss_pred HHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEEC-ChHH
Confidence 666555443 468999999999999999999999999 8865
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.88 E-value=3.9e-09 Score=103.00 Aligned_cols=84 Identities=21% Similarity=0.266 Sum_probs=72.2
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHH
Q 004437 633 AIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEI 712 (753)
Q Consensus 633 ~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 712 (753)
+|+.|+++|+++.++||++...+..+++.+|+. .++... ..|...
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~---------------------------------~~f~~~--k~K~~~ 128 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANTLGIT---------------------------------HLYQGQ--SDKLVA 128 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCC---------------------------------EEECSC--SSHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc---------------------------------hhhccc--CChHHH
Confidence 999999999999999999999999999999993 344443 567777
Q ss_pred HHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecCCCCccC
Q 004437 713 VRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 713 v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~ 752 (753)
++.+.+. .+.++|+||+.||++|++.|+++++|+ ++.+.
T Consensus 129 l~~~~~~lg~~~~~~~~vGDs~nDi~~~~~ag~~~a~~-~~~~~ 171 (211)
T 3ij5_A 129 YHELLATLQCQPEQVAYIGDDLIDWPVMAQVGLSVAVA-DAHPL 171 (211)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TSCTT
T ss_pred HHHHHHHcCcCcceEEEEcCCHHHHHHHHHCCCEEEeC-CccHH
Confidence 7766554 578999999999999999999999999 77654
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=98.86 E-value=1.1e-08 Score=105.47 Aligned_cols=42 Identities=12% Similarity=0.078 Sum_probs=39.2
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
..+.+.+.++|++++++|++++++|||+...+..+.+++|+.
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~ 78 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIR 78 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSC
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCC
Confidence 458899999999999999999999999999999999999985
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=98.84 E-value=5.6e-09 Score=100.35 Aligned_cols=83 Identities=20% Similarity=0.354 Sum_probs=70.9
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHH
Q 004437 633 AIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEI 712 (753)
Q Consensus 633 ~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 712 (753)
+|+.|+++|+++.++||++...+..+++.+|+. .++... ..|...
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~---------------------------------~~f~~~--~~K~~~ 98 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKSLGIE---------------------------------HLFQGR--EDKLVV 98 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCS---------------------------------EEECSC--SCHHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCH---------------------------------HHhcCc--CChHHH
Confidence 999999999999999999999999999999994 344333 667777
Q ss_pred HHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 713 VRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 713 v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
++.+.+. .+.++|+||+.||++|++.|+++++|+ ++.+
T Consensus 99 ~~~~~~~~g~~~~~~~~vGD~~nDi~~~~~ag~~~~~~-~~~~ 140 (189)
T 3mn1_A 99 LDKLLAELQLGYEQVAYLGDDLPDLPVIRRVGLGMAVA-NAAS 140 (189)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCH
T ss_pred HHHHHHHcCCChhHEEEECCCHHHHHHHHHCCCeEEeC-CccH
Confidence 7666554 468999999999999999999999999 7764
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=98.82 E-value=1.8e-08 Score=103.29 Aligned_cols=42 Identities=7% Similarity=0.173 Sum_probs=38.9
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
..+.+.+.++|++++++|++++++|||+...+..+.+++|+.
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 62 (279)
T 4dw8_A 21 KEISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMN 62 (279)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGG
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCC
Confidence 357899999999999999999999999999999999999973
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.80 E-value=1.4e-08 Score=96.71 Aligned_cols=89 Identities=20% Similarity=0.187 Sum_probs=73.2
Q ss_pred CchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCc
Q 004437 627 RGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEP 706 (753)
Q Consensus 627 r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 706 (753)
.+++.++|++|+++|++++++||++...+..+++.+|+. .++.. .
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~---------------------------------~~~~~--~ 81 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK---------------------------------LFFLG--K 81 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC---------------------------------EEEES--C
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCc---------------------------------eeecC--C
Confidence 456779999999999999999999999999999999984 33332 2
Q ss_pred hhHHHHHHHHHHc-C---CeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 707 RHKQEIVRMLKEM-G---EVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 707 ~~K~~~v~~l~~~-~---~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
..|...++.+.+. + +.++++||+.||++|++.|+++++|+ ++.+
T Consensus 82 k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~ 129 (180)
T 1k1e_A 82 LEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPI 129 (180)
T ss_dssp SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCH
T ss_pred CCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEeC-CccH
Confidence 4566666655443 4 68999999999999999999999999 7764
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.79 E-value=1.1e-08 Score=96.97 Aligned_cols=82 Identities=23% Similarity=0.391 Sum_probs=69.7
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHH
Q 004437 633 AIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEI 712 (753)
Q Consensus 633 ~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 712 (753)
+|+.|+++|+++.++||+....+..+++.+|+ . ++... ..|...
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi---------------------------------~-~~~~~--~~k~~~ 90 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKI---------------------------------P-VLHGI--DRKDLA 90 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTC---------------------------------C-EEESC--SCHHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCC---------------------------------e-eEeCC--CChHHH
Confidence 89999999999999999999999999999998 2 33332 557777
Q ss_pred HHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 713 VRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 713 v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
++.+.+. .+.++++||+.||++|++.|+++++|+ ++.+
T Consensus 91 l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~~-~~~~ 132 (176)
T 3mmz_A 91 LKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAVA-SAHD 132 (176)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCH
T ss_pred HHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEECC-ChhH
Confidence 7666554 468999999999999999999999999 7764
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.75 E-value=2.5e-08 Score=102.94 Aligned_cols=42 Identities=24% Similarity=0.315 Sum_probs=39.2
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
..+.+.+.++|+++++.|++++++|||+...+..+.+.+|+.
T Consensus 22 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 63 (290)
T 3dnp_A 22 GKIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLD 63 (290)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCC
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCC
Confidence 357899999999999999999999999999999999999986
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.71 E-value=3.2e-08 Score=101.51 Aligned_cols=43 Identities=14% Similarity=0.230 Sum_probs=37.9
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
..+.+.+.++|+++++.|++++++|||+...+..+.+.+|+..
T Consensus 21 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 63 (279)
T 3mpo_A 21 NELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDG 63 (279)
T ss_dssp ---CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCS
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC
Confidence 4578999999999999999999999999999999999999853
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.67 E-value=2.2e-08 Score=96.30 Aligned_cols=85 Identities=20% Similarity=0.302 Sum_probs=68.8
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeC--chhHH
Q 004437 633 AIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE--PRHKQ 710 (753)
Q Consensus 633 ~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--p~~K~ 710 (753)
+|+.|+++|+++.++||++...+..+++.+|+. .++.... |+-..
T Consensus 54 ~l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~---------------------------------~~~~~~kpk~~~~~ 100 (191)
T 3n1u_A 54 GLKLLMAAGIQVAIITTAQNAVVDHRMEQLGIT---------------------------------HYYKGQVDKRSAYQ 100 (191)
T ss_dssp HHHHHHHTTCEEEEECSCCSHHHHHHHHHHTCC---------------------------------EEECSCSSCHHHHH
T ss_pred HHHHHHHCCCeEEEEeCcChHHHHHHHHHcCCc---------------------------------cceeCCCChHHHHH
Confidence 699999999999999999999999999999994 3343332 33334
Q ss_pred HHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 711 EIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 711 ~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
.+++.++-....++|+||+.||++|++.|+++++|+ ++.+
T Consensus 101 ~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~ 140 (191)
T 3n1u_A 101 HLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAVS-NAVP 140 (191)
T ss_dssp HHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TCCH
T ss_pred HHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEeC-CccH
Confidence 445555444678999999999999999999999999 8764
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.66 E-value=6.4e-08 Score=98.00 Aligned_cols=42 Identities=17% Similarity=0.161 Sum_probs=38.1
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
..+.+.+.++|++++++|++++++|||+...+..+.+++++.
T Consensus 19 ~~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~ 60 (258)
T 2pq0_A 19 KQLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGID 60 (258)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCC
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCC
Confidence 357899999999999999999999999999999999998864
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=98.66 E-value=5.2e-08 Score=100.19 Aligned_cols=41 Identities=22% Similarity=0.103 Sum_probs=37.6
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
.+.+.+.++|++++++|++++++|||+...+..+.+.+|+.
T Consensus 39 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~ 79 (283)
T 3dao_A 39 LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHK 79 (283)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGG
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC
Confidence 58899999999999999999999999999999988888753
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.63 E-value=4.8e-08 Score=99.47 Aligned_cols=44 Identities=39% Similarity=0.560 Sum_probs=38.0
Q ss_pred hhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 707 RHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 707 ~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
..|...++.+.++ .+.+++|||+.||++|++.|++||||| ||.+
T Consensus 193 ~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam~-na~~ 240 (268)
T 3r4c_A 193 TSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMG-NASE 240 (268)
T ss_dssp CCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCH
T ss_pred CCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEeC-CCcH
Confidence 3688888877665 357999999999999999999999999 9875
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.61 E-value=6.6e-08 Score=98.70 Aligned_cols=41 Identities=17% Similarity=0.157 Sum_probs=37.7
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
.+.+.+.++++++++.|++++++|||+...+..+.+++|+.
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~ 62 (274)
T 3fzq_A 22 GIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGVD 62 (274)
T ss_dssp BCCHHHHHHHHHHHHTTCEEEEECSSCTTTSCHHHHTTCCS
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCC
Confidence 47899999999999999999999999999998988888874
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.60 E-value=6.1e-08 Score=102.31 Aligned_cols=103 Identities=19% Similarity=0.249 Sum_probs=73.4
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe-
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 703 (753)
++.+++.++++.|+++|+++.++||+....+..+++.+|+..... ..+.-. +..+..+
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~----~~l~~~-----------------d~~~tg~~ 236 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQS----NTLEIV-----------------SGKLTGQV 236 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEE----EEEEEE-----------------TTEEEEEE
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEe----eeeEee-----------------CCeeeeee
Confidence 689999999999999999999999999999999999999842100 000000 0011111
Q ss_pred ----eCchhHHHHHHHH----HHcCCeEEEEcCCcccHHHhhhcCceEecCCCCc
Q 004437 704 ----AEPRHKQEIVRML----KEMGEVVAMTGDGVNDAPALKLADIGVAMGITGT 750 (753)
Q Consensus 704 ----~~p~~K~~~v~~l----~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~ 750 (753)
..+..|...++.+ +-..+.++|+|||.||++|++.||+|++| ++.
T Consensus 237 ~~~~~~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~--~~~ 289 (335)
T 3n28_A 237 LGEVVSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY--HAK 289 (335)
T ss_dssp ESCCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE--SCC
T ss_pred cccccChhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe--CCC
Confidence 1123455544444 33357899999999999999999999999 554
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.55 E-value=4.4e-07 Score=90.12 Aligned_cols=127 Identities=22% Similarity=0.205 Sum_probs=83.3
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCcccccc-c-cch-------------------hh-
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRS-F-TGK-------------------EF- 681 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~-~-~~~-------------------~~- 681 (753)
..+.+.+.+++++++++|++++++|||+...+..+.+.+|+..+.....+.. . .++ ..
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 3477899999999999999999999999999999999998753211001100 0 000 00
Q ss_pred --h-----------------ccCHHHHHHHHHhcC--CeEE-----EeeCc--hhHHHHHHHHHHc----CCeEEEEcCC
Q 004437 682 --M-----------------ALSSTQQIEALSKHG--GKVF-----SRAEP--RHKQEIVRMLKEM----GEVVAMTGDG 729 (753)
Q Consensus 682 --~-----------------~~~~~~~~~~~~~~~--~~v~-----~~~~p--~~K~~~v~~l~~~----~~~v~~~GDg 729 (753)
. ....+....++.+.. ..+. ....| ..|...++.+.++ .+.++++||+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~ 178 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 178 (231)
T ss_dssp TCCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred CceEEecCCCceeeEEEECCCCCHHHHHHHHHhcCCcEEEEecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCC
Confidence 0 002222222322221 2222 12223 3588888776654 3579999999
Q ss_pred cccHHHhhhcCceEecCCCCcc
Q 004437 730 VNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 730 ~ND~~~l~~A~vgiamgi~g~~ 751 (753)
.||.+|++.|+++++|| ||.+
T Consensus 179 ~nD~~~~~~ag~~v~~~-~~~~ 199 (231)
T 1wr8_A 179 ENDLDAFKVVGYKVAVA-QAPK 199 (231)
T ss_dssp GGGHHHHHHSSEEEECT-TSCH
T ss_pred HHHHHHHHHcCCeEEec-CCCH
Confidence 99999999999999999 8754
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=1.7e-07 Score=87.56 Aligned_cols=83 Identities=25% Similarity=0.239 Sum_probs=67.6
Q ss_pred HHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHHH
Q 004437 633 AIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEI 712 (753)
Q Consensus 633 ~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~~ 712 (753)
+++.|+++|+++.++||++...+..+++.+|+. .++... ..|...
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~---------------------------------~~~~~~--kpk~~~ 83 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVD---------------------------------YLFQGV--VDKLSA 83 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCS---------------------------------EEECSC--SCHHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCC---------------------------------Eeeccc--CChHHH
Confidence 899999999999999999999999999999984 333333 335555
Q ss_pred HHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 713 VRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 713 v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
++.+.+. .+.++|+||+.||++|++.|+++++++ ++.+
T Consensus 84 ~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~~-~~~~ 125 (164)
T 3e8m_A 84 AEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVPA-SAPF 125 (164)
T ss_dssp HHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECCT-TSCH
T ss_pred HHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEcC-ChHH
Confidence 5444333 468999999999999999999999998 7764
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.53 E-value=1.9e-07 Score=93.91 Aligned_cols=38 Identities=11% Similarity=0.291 Sum_probs=35.4
Q ss_pred chhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 628 GGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 628 ~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
+.+.++|++|+++|++++++|||+...+..+.+.+|+.
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~ 57 (249)
T 2zos_A 20 DPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVE 57 (249)
T ss_dssp GGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 45999999999999999999999999999999999875
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=1.9e-07 Score=94.47 Aligned_cols=44 Identities=27% Similarity=0.460 Sum_probs=39.4
Q ss_pred hhHHHHHHHHHHc-C-----CeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 707 RHKQEIVRMLKEM-G-----EVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 707 ~~K~~~v~~l~~~-~-----~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
..|...++.+.+. | ..++++||+.||.+|++.|++||||| ||.+
T Consensus 175 ~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~ 224 (259)
T 3zx4_A 175 ADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYVG-RGDP 224 (259)
T ss_dssp CCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEECS-SSCC
T ss_pred CCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEeC-Chhh
Confidence 5788888888766 3 78999999999999999999999999 9876
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.51 E-value=1.4e-07 Score=94.17 Aligned_cols=124 Identities=14% Similarity=0.168 Sum_probs=78.6
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC--C--------CCCc------ccccc-------------
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF--S--------GNED------LTGRS------------- 675 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~--~--------~~~~------~~~~~------------- 675 (753)
.+.+.+.++|++|+++| +++++|||+...+..+.+.+ +. . .... +....
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l-~~~I~~nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~ 100 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLD-INMICYHGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSWV 100 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSS-CEEEEGGGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTHH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccc-hheEEECCEEEeeCCeeeecccccccchhhHHHHHHHHHHH
Confidence 57899999999999999 99999999999998887665 20 0 0000 00000
Q ss_pred -------ccchh------hhc---cCHH---HHHHHHHh-cCCeE-----EEeeCch--hHHHHHHHHHHcCCeEEEEcC
Q 004437 676 -------FTGKE------FMA---LSST---QQIEALSK-HGGKV-----FSRAEPR--HKQEIVRMLKEMGEVVAMTGD 728 (753)
Q Consensus 676 -------~~~~~------~~~---~~~~---~~~~~~~~-~~~~v-----~~~~~p~--~K~~~v~~l~~~~~~v~~~GD 728 (753)
+..+. +.. ...+ ...+.+.. .+..+ +....|. .|...++.+.+.-. |+++||
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~lei~~~~~~Kg~al~~l~~~~g-via~GD 179 (239)
T 1u02_A 101 SDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARIFGVETYYGKMIIELRVPGVNKGSAIRSVRGERP-AIIAGD 179 (239)
T ss_dssp HHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHHHTCEEEECSSEEEEECTTCCHHHHHHHHHTTSC-EEEEES
T ss_pred hhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhccCCcEEEeCCcEEEEEcCCCCHHHHHHHHHhhCC-eEEEeC
Confidence 00000 000 0011 11111111 11222 1233343 69999999987733 999999
Q ss_pred CcccHHHhhhc--CceEecCCCCccC
Q 004437 729 GVNDAPALKLA--DIGVAMGITGTEV 752 (753)
Q Consensus 729 g~ND~~~l~~A--~vgiamgi~g~~~ 752 (753)
+.||.+||+.| ++||||| ||.+.
T Consensus 180 ~~ND~~Ml~~a~~g~~vam~-Na~~~ 204 (239)
T 1u02_A 180 DATDEAAFEANDDALTIKVG-EGETH 204 (239)
T ss_dssp SHHHHHHHHTTTTSEEEEES-SSCCC
T ss_pred CCccHHHHHHhhCCcEEEEC-CCCCc
Confidence 99999999999 9999999 98654
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.50 E-value=1.4e-07 Score=98.13 Aligned_cols=44 Identities=32% Similarity=0.359 Sum_probs=38.3
Q ss_pred hhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 707 RHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 707 ~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
..|...++.+.++ .+.|++|||+.||++|++.|++||||| ||.+
T Consensus 227 ~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam~-na~~ 274 (304)
T 3l7y_A 227 LHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAMA-NAPK 274 (304)
T ss_dssp CSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEECT-TSCH
T ss_pred CCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEcC-CcCH
Confidence 4688888887665 357999999999999999999999999 9875
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=3.1e-07 Score=89.22 Aligned_cols=105 Identities=23% Similarity=0.346 Sum_probs=72.2
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccch-hhhccCHHHHHHHHHhcCCeEEE
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGK-EFMALSSTQQIEALSKHGGKVFS 702 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~~ 702 (753)
.++.++++++++.|++.|+++.++||+....+..+.+.+|+... ........+ .+. ..+..
T Consensus 75 ~~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~---------------~~~~~ 136 (211)
T 1l7m_A 75 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYA---FANRLIVKDGKLT---------------GDVEG 136 (211)
T ss_dssp CCBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEE---EEEEEEEETTEEE---------------EEEEC
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeE---EEeeeEEECCEEc---------------CCccc
Confidence 35678999999999999999999999998888888888887421 000000000 000 00000
Q ss_pred e-eCchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 703 R-AEPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 703 ~-~~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
. ..+..|...+..+.++ .+.++++||+.||++|++.|+++++|+
T Consensus 137 ~~~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~~~~ 185 (211)
T 1l7m_A 137 EVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFC 185 (211)
T ss_dssp SSCSTTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEES
T ss_pred CccCCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEEEEC
Confidence 0 1234676666555443 357999999999999999999999998
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.46 E-value=9e-08 Score=92.33 Aligned_cols=102 Identities=21% Similarity=0.268 Sum_probs=77.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|++.|++++++|+.....+..+ +.+|+... . ......+. ...-...
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~---~~~~~~~~-----------------~~~~~~~ 136 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-A---NRAIFEDG-----------------KFQGIRL 136 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-E---EEEEEETT-----------------EEEEEEC
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-e---eeEEeeCC-----------------ceECCcC
Confidence 7899999999999999999999999988887777 88887321 0 00000000 0001234
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
.|..|...++.+ ..+.++++||+.||++|++.|+++|+|+ ++.+
T Consensus 137 ~~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~~-~~~~ 180 (201)
T 4ap9_A 137 RFRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAVG-REIP 180 (201)
T ss_dssp CSSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEES-SCCT
T ss_pred CccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEEC-CCCc
Confidence 567899988888 5678999999999999999999999999 7653
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=5.5e-07 Score=86.23 Aligned_cols=84 Identities=25% Similarity=0.331 Sum_probs=67.5
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHH
Q 004437 632 KAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQE 711 (753)
Q Consensus 632 ~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 711 (753)
.+|+.|+++|++++++||++...+..+++.+|+. .++... ..|..
T Consensus 60 ~~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~---------------------------------~~~~~~--kpk~~ 104 (188)
T 2r8e_A 60 YGIRCALTSDIEVAIITGRKAKLVEDRCATLGIT---------------------------------HLYQGQ--SNKLI 104 (188)
T ss_dssp HHHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCC---------------------------------EEECSC--SCSHH
T ss_pred HHHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCc---------------------------------eeecCC--CCCHH
Confidence 4899999999999999999999999999999984 233332 33455
Q ss_pred HHHHHHHc-C---CeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 712 IVRMLKEM-G---EVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 712 ~v~~l~~~-~---~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
.++.+.+. | +.++++||+.||++|++.|+++++++ ++.+
T Consensus 105 ~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~~-~~~~ 147 (188)
T 2r8e_A 105 AFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVA-DAHP 147 (188)
T ss_dssp HHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEECT-TSCT
T ss_pred HHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEec-CcCH
Confidence 55544433 3 68999999999999999999999998 7654
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.41 E-value=9.4e-07 Score=90.63 Aligned_cols=43 Identities=19% Similarity=0.309 Sum_probs=39.3
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
..+.+++.++|++|+++|++++++|||+...+..+.+++++..
T Consensus 21 ~~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~ 63 (282)
T 1rkq_A 21 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQ 63 (282)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCS
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3578999999999999999999999999999999999999753
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.40 E-value=7.5e-07 Score=82.95 Aligned_cols=90 Identities=20% Similarity=0.216 Sum_probs=69.9
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 705 (753)
+.+++.++|+.|+++|++++++||++...+..+++.+|+. .++....
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~---------------------------------~~~~~~k 83 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVE---------------------------------EIYTGSY 83 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCC---------------------------------EEEECC-
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCH---------------------------------hhccCCC
Confidence 3577899999999999999999999999999999999983 2333322
Q ss_pred chhHHHHH----HHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 706 PRHKQEIV----RMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 706 p~~K~~~v----~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
| |...+ +.+.-..+.++++||+.||++|.+.|+++++++ ++.+
T Consensus 84 p--~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~~-~~~~ 130 (162)
T 2p9j_A 84 K--KLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAVR-NAVE 130 (162)
T ss_dssp ---CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCH
T ss_pred C--CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEec-CccH
Confidence 3 33333 333323567999999999999999999999998 7643
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.39 E-value=1.4e-06 Score=89.05 Aligned_cols=40 Identities=10% Similarity=0.103 Sum_probs=37.0
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~ 665 (753)
+.+.+.++|++|+++|++++++|||+...+..+.+++|+.
T Consensus 27 ~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~ 66 (275)
T 1xvi_A 27 DWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 66 (275)
T ss_dssp SCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred CCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC
Confidence 4577899999999999999999999999999999999875
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=1.8e-06 Score=78.81 Aligned_cols=143 Identities=15% Similarity=0.235 Sum_probs=87.2
Q ss_pred CCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCCcceecC
Q 004437 367 KTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATG 446 (753)
Q Consensus 367 KTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~ 446 (753)
..||+|-|++.+..+.+.+. ++ -.+++.+++.+. ..+.
T Consensus 13 ~~~tit~gnr~vt~v~~~~g--------------~~-----------------e~elL~lAAs~E-----------~~Se 50 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQG--------------VD-----------------EKTLADAAQLAS-----------LADE 50 (156)
T ss_dssp --------CEEEEEEEECTT--------------SC-----------------HHHHHHHHHHTT-----------SSCC
T ss_pred CCCceecCCCeEEEEEecCC--------------CC-----------------HHHHHHHHHHHh-----------CcCC
Confidence 47999999999999875421 00 134444444332 3456
Q ss_pred CchHHHHHHHHHHc-CCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEEecCCCeE
Q 004437 447 LPTEAALKVLVEKM-GFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHN 525 (753)
Q Consensus 447 ~p~e~al~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~~~ 525 (753)
||...|+++++++. +...... .. ......+|++..++.++.+ +|
T Consensus 51 HPla~AIv~~A~~~~~l~~~~~----------------------------~~--~~~~~~~F~a~~G~~Gv~v---~G-- 95 (156)
T 1svj_A 51 TPEGRSIVILAKQRFNLRERDV----------------------------QS--LHATFVPFTAQSRMSGINI---DN-- 95 (156)
T ss_dssp SHHHHHHHHHHHHHTTCCCCCH----------------------------HH--HTCEEEEEETTTTEEEEEE---TT--
T ss_pred CHHHHHHHHHHHHhcCCCcccc----------------------------cc--cccceeeccccCCCCeEEE---CC--
Confidence 99999999999876 5432110 00 0123468888877777754 34
Q ss_pred EEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCc
Q 004437 526 QLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPS 605 (753)
Q Consensus 526 ~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~ 605 (753)
..+.+|+++.|...+... |. .+. ..+.+..++++++|.+++.+|.
T Consensus 96 ~~v~vGn~~~i~~l~~~~----gi--~~~----~~~~~~~~~la~~G~T~v~VA~------------------------- 140 (156)
T 1svj_A 96 RMIRKGSVDAIRRHVEAN----GG--HFP----TDVDQKVDQVARQGATPLVVVE------------------------- 140 (156)
T ss_dssp EEEEEEEHHHHHHHHHHH----TC--CCC----HHHHHHHHHHHHTTCEEEEEEE-------------------------
T ss_pred EEEEEeCcHHHHHHHHHc----CC--CCc----HHHHHHHHHHHhCCCCEEEEEE-------------------------
Confidence 457789988776665421 11 122 2356677889999999999995
Q ss_pred ccccCCCCeEEEEEccccCCCCc
Q 004437 606 CYSTIESDLVFVGVVGLRDPPRG 628 (753)
Q Consensus 606 ~~~~~e~~l~~lG~i~~~d~~r~ 628 (753)
|.+++|+|++.|++|+
T Consensus 141 -------d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 141 -------GSRVLGVIALKDIVKG 156 (156)
T ss_dssp -------TTEEEEEEEEEECCCC
T ss_pred -------CCEEEEEEEEecCCCC
Confidence 3478999999999996
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.35 E-value=1.1e-06 Score=85.85 Aligned_cols=102 Identities=17% Similarity=0.227 Sum_probs=73.7
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeE---
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKV--- 700 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--- 700 (753)
-++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...- ...+..+. ..+
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f----~~~~~~~~-----------------~~~~~~ 132 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAF----SNTLIVEN-----------------DALNGL 132 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEE----EEEEEEET-----------------TEEEEE
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhc----cceeEEeC-----------------CEEEee
Confidence 458899999999999999999999999999999999999985311 00000000 000
Q ss_pred EEe--eCchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 701 FSR--AEPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 701 ~~~--~~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
+.. .....|...++.+.+. ...++++||+.||++|++.|+++++|.
T Consensus 133 ~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~~~~ 184 (217)
T 3m1y_A 133 VTGHMMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKIAFN 184 (217)
T ss_dssp EEESCCSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEEEES
T ss_pred eccCCCCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeEEEC
Confidence 111 1234566666555443 467999999999999999999999993
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.32 E-value=1.1e-06 Score=91.53 Aligned_cols=101 Identities=18% Similarity=0.240 Sum_probs=72.8
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|+++|+++.++||.....+..+++.+|+...-. ..+..+. ..+-.+.
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~----~~l~~~d-----------------g~~tg~i 237 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFS----NTVEIRD-----------------NVLTDNI 237 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEE----ECEEEET-----------------TEEEEEE
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEE----EEEEeeC-----------------CeeeeeE
Confidence 488999999999999999999999999999999999999842100 0000000 0011111
Q ss_pred -----CchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 705 -----EPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 705 -----~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
.+..|..+++.+.+. ...++|+||+.||++|++.||+|++++
T Consensus 238 ~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~~ 288 (317)
T 4eze_A 238 TLPIMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAWK 288 (317)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEES
T ss_pred ecccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEeC
Confidence 234555555544332 467999999999999999999999995
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=98.32 E-value=2.2e-06 Score=84.76 Aligned_cols=101 Identities=19% Similarity=0.137 Sum_probs=73.4
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe-
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR- 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~- 703 (753)
.+.+++.+.++.|++.|++++++|+.....+..+++.+|+..- +.......+ .....+
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~---~~~~~~~~~------------------~~~~g~~ 150 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHL---IATDPEYRD------------------GRYTGRI 150 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEE---EECEEEEET------------------TEEEEEE
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEE---EEcceEEEC------------------CEEeeee
Confidence 4789999999999999999999999999999999999998520 000000000 011111
Q ss_pred ----eCchhHHHHHHHHHH-cC------CeEEEEcCCcccHHHhhhcCceEecC
Q 004437 704 ----AEPRHKQEIVRMLKE-MG------EVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 704 ----~~p~~K~~~v~~l~~-~~------~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
..+..|...++.+.+ .| +.++++||+.||++|++.|++++++.
T Consensus 151 ~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~~~ 204 (232)
T 3fvv_A 151 EGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVTRPIAAN 204 (232)
T ss_dssp ESSCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSSEEEEES
T ss_pred cCCCCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCCCeEEEC
Confidence 123567666655433 34 68999999999999999999999986
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=98.28 E-value=7.2e-07 Score=94.96 Aligned_cols=113 Identities=13% Similarity=0.119 Sum_probs=77.2
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEE
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS 702 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 702 (753)
.-.++|++++.|+.|+++|++|+|+||.....++.+|+++|+...... ..+ .|..+.... +..+..
T Consensus 219 gir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~y~ip~--~~V-ig~~l~~~~-----------dG~~tg 284 (385)
T 4gxt_A 219 GIRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNNYKMKE--EKV-LGLRLMKDD-----------EGKILP 284 (385)
T ss_dssp CCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSSCCCCG--GGE-EEECEEECT-----------TCCEEE
T ss_pred CceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcccCCCc--ceE-EEeEEEEec-----------CCceee
Confidence 345889999999999999999999999999999999999997432110 001 111111000 012222
Q ss_pred ee-------CchhHHHHHHHHHHc---CCeEEEEcCCcccHHHhhh-cCceEecCCCC
Q 004437 703 RA-------EPRHKQEIVRMLKEM---GEVVAMTGDGVNDAPALKL-ADIGVAMGITG 749 (753)
Q Consensus 703 ~~-------~p~~K~~~v~~l~~~---~~~v~~~GDg~ND~~~l~~-A~vgiamgi~g 749 (753)
+. ..+.|...|+.+... ...++|+|||.||.+||+. +|.++.+.+|.
T Consensus 285 ~~~~~~p~~~~~gK~~~i~~~~~~~~~~~~i~a~GDs~~D~~ML~~~~~~~~~liinr 342 (385)
T 4gxt_A 285 KFDKDFPISIREGKVQTINKLIKNDRNYGPIMVGGDSDGDFAMLKEFDHTDLSLIIHR 342 (385)
T ss_dssp EECTTSCCCSTHHHHHHHHHHTCCTTEECCSEEEECSGGGHHHHHHCTTCSEEEEECC
T ss_pred eecCccceeCCCchHHHHHHHHHhcCCCCcEEEEECCHhHHHHHhcCccCceEEEEcC
Confidence 22 345799888876433 2358899999999999996 67777666553
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.27 E-value=1.4e-06 Score=94.77 Aligned_cols=101 Identities=20% Similarity=0.274 Sum_probs=74.7
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.+.++.|++.|+++.++||.....+..+++.+|+..... ..+.- . +..+..+.
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~----~~l~~--~---------------dg~~tg~~ 314 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAA----NELEI--V---------------DGTLTGRV 314 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEE----ECEEE--E---------------TTEEEEEE
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceee----eeEEE--e---------------CCEEEeeE
Confidence 789999999999999999999999999999999999999942100 00000 0 01111111
Q ss_pred -----CchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 705 -----EPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 705 -----~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
.+..|..+++.+.+. .+.++|+||+.||++|++.||+|++++
T Consensus 315 ~~~v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~~ 365 (415)
T 3p96_A 315 VGPIIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAFN 365 (415)
T ss_dssp CSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEES
T ss_pred ccCCCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEEC
Confidence 145666666665543 367999999999999999999999994
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.22 E-value=4.7e-06 Score=84.66 Aligned_cols=41 Identities=7% Similarity=-0.028 Sum_probs=37.6
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
.+.+.+.++|++ +++|++++++|||+...+..+.+++|+..
T Consensus 19 ~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~ 59 (268)
T 1nf2_A 19 EISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKRT 59 (268)
T ss_dssp CCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSSC
T ss_pred ccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCCC
Confidence 477899999999 99999999999999999999999998853
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.21 E-value=2.4e-06 Score=88.39 Aligned_cols=42 Identities=19% Similarity=0.120 Sum_probs=38.0
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHH--HHcC-CC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAIC--RQIK-LF 665 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia--~~~g-i~ 665 (753)
..+.+++.++|++|+++|++++++|||+...+..+. ++++ +.
T Consensus 44 ~~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~ 88 (301)
T 2b30_A 44 IKVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMN 88 (301)
T ss_dssp TCSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHT
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccc
Confidence 457899999999999999999999999999999999 8877 64
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.20 E-value=4.6e-06 Score=80.78 Aligned_cols=101 Identities=19% Similarity=0.207 Sum_probs=79.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEE--
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS-- 702 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-- 702 (753)
++.+++.+.++.|++. ++++++|+.....+..+.+.+|+...- ...+..+.. .....
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f---~~~~~~~~~-----------------~~~~~~~ 127 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLL---CHKLEIDDS-----------------DRVVGYQ 127 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEE---EEEEEECTT-----------------SCEEEEE
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCccee---cceeEEcCC-----------------ceEEeee
Confidence 5789999999999999 999999999999999999999985311 000111110 11111
Q ss_pred eeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 703 RAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 703 ~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
.-.|+.|...++.+......++|+||+.||++|.+.||++++|+
T Consensus 128 ~p~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~ 171 (206)
T 1rku_A 128 LRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH 171 (206)
T ss_dssp CCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES
T ss_pred cCCCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEEC
Confidence 24678899999999888889999999999999999999999985
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.19 E-value=1.6e-06 Score=83.94 Aligned_cols=105 Identities=15% Similarity=0.161 Sum_probs=72.5
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-.. ..+++.+. ....-
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~i~~~~~-------------------~~~kp 128 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAE--ADVLGRDE-------------------APPKP 128 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCG--GGEECTTT-------------------SCCTT
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCc--ceEEeCCC-------------------CCCCC
Confidence 3568999999999999999999999999999999999998431100 01111110 00000
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc-eEecCCCCcc
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI-GVAMGITGTE 751 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v-giamgi~g~~ 751 (753)
.|+--..+++.+.-....+++|||+.||+.|.+.||+ +|+|+ +|.+
T Consensus 129 ~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~-~~~~ 175 (205)
T 3m9l_A 129 HPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRTVLVN-LPDN 175 (205)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEECS-SSSC
T ss_pred CHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEEEEEe-CCCC
Confidence 1122233344443335689999999999999999999 99999 7754
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=4.1e-06 Score=83.76 Aligned_cols=43 Identities=19% Similarity=0.247 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 708 HKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 708 ~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
.|...++.+.+. ...++++||+.||.+|++.|++||||| ||.+
T Consensus 162 ~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~~g~~va~~-na~~ 208 (244)
T 1s2o_A 162 NKGNATQYLQQHLAMEPSQTLVCGDSGNDIGLFETSARGVIVR-NAQP 208 (244)
T ss_dssp SHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHTSSSEEEECT-TCCH
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHhccCcEEEEc-CCcH
Confidence 688888887765 357999999999999999999999999 8865
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.18 E-value=6e-06 Score=84.83 Aligned_cols=43 Identities=21% Similarity=0.259 Sum_probs=38.6
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
..+.+.+.+++++++++|++++++|||+...+..+.+++|+..
T Consensus 20 ~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~ 62 (288)
T 1nrw_A 20 HQVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKT 62 (288)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCC
T ss_pred CccCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCC
Confidence 3478899999999999999999999999999999999988753
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.16 E-value=1.8e-06 Score=85.69 Aligned_cols=102 Identities=24% Similarity=0.234 Sum_probs=73.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-. .++.++... ...-
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~------------------~~kp 161 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLT----VIAGDDSVE------------------RGKP 161 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCS----EEECTTTSS------------------SCTT
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhee----eEEeCCCCC------------------CCCC
Confidence 367899999999999999999999999999999999998753211 111111110 0001
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc---eEecCCCC
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI---GVAMGITG 749 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v---giamgi~g 749 (753)
.|+--..+++.+.-..+.+++|||+.||+.|++.||+ +|+|| ++
T Consensus 162 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g-~~ 208 (237)
T 4ex6_A 162 HPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYG-VS 208 (237)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSS-SS
T ss_pred CHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEEecC-CC
Confidence 1222344555555456789999999999999999999 99999 54
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.15 E-value=3.5e-06 Score=82.49 Aligned_cols=99 Identities=18% Similarity=0.193 Sum_probs=68.6
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+.+++.+.++.+++.|++++++|+.....+..+.+.+|+..... .++.++... ...-
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~------------------~~kp 151 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD----ALASAEKLP------------------YSKP 151 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS----EEEECTTSS------------------CCTT
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCc----EEEeccccC------------------CCCC
Confidence 356889999999999999999999999888888888888743111 111111000 0000
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEec
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAM 745 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 745 (753)
.|+--..+++.+.-....+++|||+.||++|++.||++++|
T Consensus 152 ~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~~~~ 192 (226)
T 1te2_A 152 HPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIV 192 (226)
T ss_dssp STHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEE
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCEEEE
Confidence 12222344444444457899999999999999999999999
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.14 E-value=2e-06 Score=84.53 Aligned_cols=97 Identities=21% Similarity=0.277 Sum_probs=72.0
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-. ..+.+..
T Consensus 86 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~----------------------------~~~~~~~ 137 (226)
T 3mc1_A 86 KVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD----------------------------AIVGSSL 137 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------EEEEECT
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhee----------------------------eeeccCC
Confidence 467999999999999999999999999998999999998853111 1122221
Q ss_pred Cc--hhHHHHHHH----HHHcCCeEEEEcCCcccHHHhhhcCc---eEecCCCCc
Q 004437 705 EP--RHKQEIVRM----LKEMGEVVAMTGDGVNDAPALKLADI---GVAMGITGT 750 (753)
Q Consensus 705 ~p--~~K~~~v~~----l~~~~~~v~~~GDg~ND~~~l~~A~v---giamgi~g~ 750 (753)
.+ ..|...++. +.-..+.+++|||+.||+.|.+.||+ +|+|| ++.
T Consensus 138 ~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g-~~~ 191 (226)
T 3mc1_A 138 DGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNLPSIGVTYG-FGS 191 (226)
T ss_dssp TSSSCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTCCEEEESSS-SSC
T ss_pred CCCCCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCCCEEEEccC-CCC
Confidence 11 224444433 33334689999999999999999999 99998 653
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.12 E-value=3.6e-06 Score=85.63 Aligned_cols=44 Identities=36% Similarity=0.413 Sum_probs=37.7
Q ss_pred hhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 707 RHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 707 ~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
..|...++.+.+. .+.++++||+.||++|++.|++||||| ||.+
T Consensus 190 ~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~~-na~~ 237 (271)
T 1rlm_A 190 LHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAE 237 (271)
T ss_dssp CSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCH
T ss_pred CChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEeC-CccH
Confidence 3688888877655 357999999999999999999999999 8864
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.08 E-value=4.4e-06 Score=81.38 Aligned_cols=107 Identities=13% Similarity=0.127 Sum_probs=70.7
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEE--e
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS--R 703 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~ 703 (753)
+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...........+..+.. ..-+. .
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~ 146 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPRENIFAVETIWNSDGS----------------FKELDNSN 146 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGGEEEEEEEECTTSB----------------EEEEECTT
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCcccEEEeeeeecCCCc----------------eeccCCCC
Confidence 78999999999999999999999999999999999999842100000000000000 00011 1
Q ss_pred eCchhHHHHHHHH-HHcCCeEEEEcCCcccHHHhhh----cCceEecCCCC
Q 004437 704 AEPRHKQEIVRML-KEMGEVVAMTGDGVNDAPALKL----ADIGVAMGITG 749 (753)
Q Consensus 704 ~~p~~K~~~v~~l-~~~~~~v~~~GDg~ND~~~l~~----A~vgiamgi~g 749 (753)
..|..+...+..+ .-..+.++|+||+.||++|++. +.++++|+ ++
T Consensus 147 ~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~~~-~~ 196 (219)
T 3kd3_A 147 GACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYMEH-IE 196 (219)
T ss_dssp STTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEECSS-CC
T ss_pred CCcccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEeccCc-cc
Confidence 2344565655544 4457889999999999999975 45566665 44
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.07 E-value=4.5e-06 Score=82.44 Aligned_cols=101 Identities=13% Similarity=0.111 Sum_probs=68.7
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 705 (753)
+.+++.+.++.|++.|+++.++|+... +..+.+.+|+...-. .++.++.. ....-.
T Consensus 93 ~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~----~i~~~~~~------------------~~~Kp~ 148 (233)
T 3nas_A 93 LLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFH----AIVDPTTL------------------AKGKPD 148 (233)
T ss_dssp SCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCS----EECCC---------------------------
T ss_pred cCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcC----EEeeHhhC------------------CCCCCC
Confidence 678999999999999999999999854 677888888753211 11111110 001112
Q ss_pred chhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 706 PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 706 p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
|+--..+++.+.-..+.++||||+.||+.|.+.||++++|. ++.+
T Consensus 149 ~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~~~~~-~~~~ 193 (233)
T 3nas_A 149 PDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMFAVGV-GQGQ 193 (233)
T ss_dssp CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCEEEEC-C---
T ss_pred hHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCEEEEE-CCcc
Confidence 22234555556555678999999999999999999999998 6543
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.04 E-value=3.3e-06 Score=81.29 Aligned_cols=101 Identities=13% Similarity=0.121 Sum_probs=69.9
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 705 (753)
+.+++.+.++.|++.|++++++|+....... ..+.+|+...- ..++..+... ...-.
T Consensus 86 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f----~~~~~~~~~~------------------~~Kp~ 142 (207)
T 2go7_A 86 LMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYF----TEILTSQSGF------------------VRKPS 142 (207)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGE----EEEECGGGCC------------------CCTTS
T ss_pred eCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhe----eeEEecCcCC------------------CCCCC
Confidence 5789999999999999999999999988777 77888774210 1111111100 00011
Q ss_pred chhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce-EecCCCCc
Q 004437 706 PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG-VAMGITGT 750 (753)
Q Consensus 706 p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamgi~g~ 750 (753)
|+--..+++.++-..+.++++||+.||++|++.||++ |+|+ +|.
T Consensus 143 ~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~~-~~~ 187 (207)
T 2go7_A 143 PEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL-EST 187 (207)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS-CCS
T ss_pred cHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEEe-cCC
Confidence 2222445555554466899999999999999999997 8898 764
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=98.04 E-value=7.9e-06 Score=80.37 Aligned_cols=104 Identities=21% Similarity=0.351 Sum_probs=73.4
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.++++.|+++|++++++|+.....+..+.+.+|+... ..+ ...+.-. + ...+.+..
T Consensus 86 ~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~-~~f-~~~~~~~-~---------------~~~~~~~~ 147 (225)
T 1nnl_A 86 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPAT-NVF-ANRLKFY-F---------------NGEYAGFD 147 (225)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGG-GEE-EECEEEC-T---------------TSCEEEEC
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcc-cEE-eeeEEEc-C---------------CCcEecCC
Confidence 5889999999999999999999999999999999999998520 000 0000000 0 00112221
Q ss_pred C------chhHHHHHHHHHHc-C-CeEEEEcCCcccHHHhhhcCceEecC
Q 004437 705 E------PRHKQEIVRMLKEM-G-EVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 705 ~------p~~K~~~v~~l~~~-~-~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
. +..|-.+++.+.+. | ..++++||+.||+.|.+.||++|++|
T Consensus 148 ~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag~~i~~~ 197 (225)
T 1nnl_A 148 ETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFG 197 (225)
T ss_dssp TTSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEEC
T ss_pred CCCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCCeEEEec
Confidence 1 23566666655443 4 67999999999999999999988887
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.03 E-value=4.4e-06 Score=84.50 Aligned_cols=37 Identities=11% Similarity=0.249 Sum_probs=33.5
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIK 663 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~g 663 (753)
+.+.+.++|++|+++|++++++|||+ ..+..+.+++|
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~-~~~~~~~~~l~ 57 (261)
T 2rbk_A 21 IPSSTIEALEAAHAKGLKIFIATGRP-KAIINNLSELQ 57 (261)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEECSSC-GGGCCSCHHHH
T ss_pred CCHHHHHHHHHHHHCCCEEEEECCCh-HHHHHHHHHhC
Confidence 77899999999999999999999999 88877777776
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=98.02 E-value=5.9e-06 Score=81.54 Aligned_cols=97 Identities=12% Similarity=0.100 Sum_probs=70.4
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 705 (753)
+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-. ..+.+...
T Consensus 104 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~----------------------------~i~~~~~~ 155 (231)
T 3kzx_A 104 LNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFD----------------------------SIIGSGDT 155 (231)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------EEEEETSS
T ss_pred ECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhee----------------------------eEEccccc
Confidence 67899999999999999999999999999999999999853111 11222211
Q ss_pred c------hhHHHHHHHHHHcCC-eEEEEcCCcccHHHhhhcCc-eEecCCCCcc
Q 004437 706 P------RHKQEIVRMLKEMGE-VVAMTGDGVNDAPALKLADI-GVAMGITGTE 751 (753)
Q Consensus 706 p------~~K~~~v~~l~~~~~-~v~~~GDg~ND~~~l~~A~v-giamgi~g~~ 751 (753)
+ +--..+++.+.-... .+++|||+.||+.|.+.||+ +|+|+ ++.+
T Consensus 156 ~~~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~~~v~~~-~~~~ 208 (231)
T 3kzx_A 156 GTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGCLPIKYG-STNI 208 (231)
T ss_dssp SCCTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTCEEEEEC-C---
T ss_pred CCCCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCCeEEEEC-CCCC
Confidence 2 222344455544455 89999999999999999997 88887 6543
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.98 E-value=1.4e-05 Score=81.78 Aligned_cols=103 Identities=9% Similarity=-0.073 Sum_probs=72.3
Q ss_pred CCCchhHHHHHHHHhCCC--eEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEE
Q 004437 625 PPRGGVDKAIDDCRGAGI--EVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS 702 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi--~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 702 (753)
++.+++.+.++.|++.|+ +++++|+.....+..+.+.+|+...-. .+++++.... ..
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd----~v~~~~~~~~----------------~~- 200 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFD----GLTYCDYSRT----------------DT- 200 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCS----EEECCCCSSC----------------SS-
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccc----eEEEeccCCC----------------cc-
Confidence 577999999999999999 999999999999999999999854221 1111110000 00
Q ss_pred eeCchhHHHHH----HHHHHcC-CeEEEEcCCcccHHHhhhcCceEecCCCCc
Q 004437 703 RAEPRHKQEIV----RMLKEMG-EVVAMTGDGVNDAPALKLADIGVAMGITGT 750 (753)
Q Consensus 703 ~~~p~~K~~~v----~~l~~~~-~~v~~~GDg~ND~~~l~~A~vgiamgi~g~ 750 (753)
..+.-|..++ +.+.-.. +.+++|||+.||+.|.+.||+|++|+ ++.
T Consensus 201 -~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~~~~-~~~ 251 (282)
T 3nuq_A 201 -LVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLGMKTCIH-LVE 251 (282)
T ss_dssp -CCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHTCSEEEE-ECS
T ss_pred -cCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCCCeEEEE-EcC
Confidence 0112233333 3343345 78999999999999999999999998 543
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=97.97 E-value=1e-05 Score=84.90 Aligned_cols=120 Identities=16% Similarity=0.144 Sum_probs=73.5
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccch------------------hhhccCH
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGK------------------EFMALSS 686 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~------------------~~~~~~~ 686 (753)
++++++.++++.|++ |+.+.++||+....+..+.+.+++... +....+..+ .+.....
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 178 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGE---LHGTEVDFDSIAVPEGLREELLSIIDVIASLSGE 178 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSE---EEEEBCCGGGCCCCHHHHHHHHHHHHHHHHCCHH
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhh---hcccccchhhhccccccceeEEecCHHHHhhhhH
Confidence 468999999999999 999999999986666677777776321 101000000 0000000
Q ss_pred HHHHHHHHh----cCCeEEE----eeCchhHHHHHHHHHHcC--CeEEEEcCCcccHHHhhhc----CceEecCCCCcc
Q 004437 687 TQQIEALSK----HGGKVFS----RAEPRHKQEIVRMLKEMG--EVVAMTGDGVNDAPALKLA----DIGVAMGITGTE 751 (753)
Q Consensus 687 ~~~~~~~~~----~~~~v~~----~~~p~~K~~~v~~l~~~~--~~v~~~GDg~ND~~~l~~A----~vgiamgi~g~~ 751 (753)
+++ +.+.. .....+. -..+.+|...++.+.... +.|+++|||.||++|++.| ++|||| ||.+
T Consensus 179 ~~l-~~~~~~~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ml~~A~~~~g~~vam--na~~ 254 (332)
T 1y8a_A 179 ELF-RKLDELFSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAARGLGGVAIAF--NGNE 254 (332)
T ss_dssp HHH-HHHHHHHHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHHHHTTCEEEEE--SCCH
T ss_pred HHH-HHHHHHHhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHHHHHHHhhcCCeEEEe--cCCH
Confidence 111 11000 0000011 112456888888665432 4599999999999999999 999999 6654
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=97.93 E-value=8.1e-06 Score=81.10 Aligned_cols=97 Identities=22% Similarity=0.177 Sum_probs=71.5
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-. ..+.+..
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~----------------------------~~~~~~~ 161 (240)
T 3sd7_A 110 KIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFK----------------------------YIAGSNL 161 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------EEEEECT
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEE----------------------------EEEeccc
Confidence 467999999999999999999999999999999999999853111 1122221
Q ss_pred Cc--hhHHH----HHHHHHHc-CCeEEEEcCCcccHHHhhhcCc---eEecCCCCc
Q 004437 705 EP--RHKQE----IVRMLKEM-GEVVAMTGDGVNDAPALKLADI---GVAMGITGT 750 (753)
Q Consensus 705 ~p--~~K~~----~v~~l~~~-~~~v~~~GDg~ND~~~l~~A~v---giamgi~g~ 750 (753)
.+ ..|.. +++.+.-. ...+++|||+.||+.|.+.||+ +|++| ++.
T Consensus 162 ~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~~g-~~~ 216 (240)
T 3sd7_A 162 DGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIGIDSIGVLYG-YGS 216 (240)
T ss_dssp TSCCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS-SCC
T ss_pred cCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCCCCEEEEeCC-CCC
Confidence 11 12333 33444444 5689999999999999999999 88888 543
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=97.92 E-value=9.2e-06 Score=79.41 Aligned_cols=95 Identities=16% Similarity=0.108 Sum_probs=66.2
Q ss_pred CchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCc
Q 004437 627 RGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEP 706 (753)
Q Consensus 627 r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p 706 (753)
.+++.+.++.+++.|+++.++|+..........+.+|+..... .++.++... ...|
T Consensus 91 ~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--------------------~~k~ 146 (225)
T 3d6j_A 91 FPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFD----IIIGGEDVT--------------------HHKP 146 (225)
T ss_dssp CTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCS----EEECGGGCS--------------------SCTT
T ss_pred CcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhee----eeeehhhcC--------------------CCCC
Confidence 5899999999999999999999999888888888888753211 111111110 0011
Q ss_pred --hhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEec
Q 004437 707 --RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAM 745 (753)
Q Consensus 707 --~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 745 (753)
.--..+++.+.-....+++|||+.||++|++.||++++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~~~ 187 (225)
T 3d6j_A 147 DPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSFTG 187 (225)
T ss_dssp STHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred ChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeEEE
Confidence 111233333333356799999999999999999998887
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=97.90 E-value=4.3e-06 Score=81.66 Aligned_cols=100 Identities=12% Similarity=0.016 Sum_probs=67.4
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 705 (753)
+.+++.+.++.|++.|+++.++|+. ..+..+.+.+|+...- ..++.++.... ..-.
T Consensus 92 ~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f----~~~~~~~~~~~------------------~Kp~ 147 (221)
T 2wf7_A 92 VYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYF----DAIADPAEVAA------------------SKPA 147 (221)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGC----SEECCTTTSSS------------------CTTS
T ss_pred CCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHc----ceEeccccCCC------------------CCCC
Confidence 5689999999999999999999998 4456677778874311 11111111100 0001
Q ss_pred chhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCc
Q 004437 706 PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGT 750 (753)
Q Consensus 706 p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~ 750 (753)
|+--..+++.+.-..+.+++|||+.||++|++.||++++|+ |+.
T Consensus 148 ~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~~~~~-~~~ 191 (221)
T 2wf7_A 148 PDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGV-GRP 191 (221)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE-SCH
T ss_pred hHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCEEEEE-CCH
Confidence 22223344444434568999999999999999999999998 764
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.90 E-value=1.6e-05 Score=76.98 Aligned_cols=100 Identities=17% Similarity=0.147 Sum_probs=71.5
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-. .++.++.... ..-
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~------------------~kp 146 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFD----IVLSGEEFKE------------------SKP 146 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS----EEEEGGGCSS------------------CTT
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhhee----eEeecccccC------------------CCC
Confidence 357899999999999999999999999999999999999853211 1111111100 000
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
.|+--..+++.+.-..+.+++|||+.||+.|.+.||++++|.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~ 188 (214)
T 3e58_A 147 NPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAI 188 (214)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEE
T ss_pred ChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEE
Confidence 122224445555444578999999999999999999988886
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=1e-05 Score=80.87 Aligned_cols=44 Identities=20% Similarity=0.226 Sum_probs=36.7
Q ss_pred hHHHHHHHHHHcCCeEEEEcC----CcccHHHhhhcC-ceEecCCCCccC
Q 004437 708 HKQEIVRMLKEMGEVVAMTGD----GVNDAPALKLAD-IGVAMGITGTEV 752 (753)
Q Consensus 708 ~K~~~v~~l~~~~~~v~~~GD----g~ND~~~l~~A~-vgiamgi~g~~~ 752 (753)
.|...++.|.+..+.|++||| |.||.+||+.|+ +|++|+ |+.|.
T Consensus 187 ~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v~-n~~~~ 235 (246)
T 3f9r_A 187 DKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKVT-SYKDT 235 (246)
T ss_dssp SGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEECS-SHHHH
T ss_pred CHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEeC-CHHHH
Confidence 577777776665678999999 699999999996 899999 88764
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.89 E-value=9.7e-06 Score=79.85 Aligned_cols=100 Identities=14% Similarity=0.133 Sum_probs=69.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...-. .++.++.... ..-
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~------------------~kp 148 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKI----NIVTRDDVSY------------------GKP 148 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSS----CEECGGGSSC------------------CTT
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhh----eeeccccCCC------------------CCC
Confidence 356899999999999999999999999999999999998854211 1222211100 000
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc---eEecC
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI---GVAMG 746 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v---giamg 746 (753)
.|+--..+++.+.-..+.+++|||+.||+.|.+.||+ +|++|
T Consensus 149 ~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~g 193 (233)
T 3s6j_A 149 DPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKATGVGLLSG 193 (233)
T ss_dssp STHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCEEEEEGGG
T ss_pred ChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCEEEEEeCC
Confidence 1111223333333335679999999999999999999 77777
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.87 E-value=1.3e-05 Score=75.80 Aligned_cols=89 Identities=21% Similarity=0.174 Sum_probs=64.4
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHcC--CCCCCCccccccccchhhhccCHH
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNK---------------STAEAICRQIK--LFSGNEDLTGRSFTGKEFMALSST 687 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~---------------~~a~~ia~~~g--i~~~~~~~~~~~~~~~~~~~~~~~ 687 (753)
++.+++.++|++|+++|+++.++|+.+. ..+..+.+.+| +.
T Consensus 27 ~~~~g~~~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~---------------------- 84 (179)
T 3l8h_A 27 IALPGSLQAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVD---------------------- 84 (179)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCC----------------------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCcee----------------------
Confidence 5789999999999999999999999985 44556666777 32
Q ss_pred HHHHHHHhcCCeEE-Ee---------eC--chhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc---eEecC
Q 004437 688 QQIEALSKHGGKVF-SR---------AE--PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI---GVAMG 746 (753)
Q Consensus 688 ~~~~~~~~~~~~v~-~~---------~~--p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v---giamg 746 (753)
.++ +. .. |+-=..+++.+.-..+.++||||+.||+.|.+.|++ +|++|
T Consensus 85 -----------~~~~~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~g 147 (179)
T 3l8h_A 85 -----------AIFMCPHGPDDGCACRKPLPGMYRDIARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQTG 147 (179)
T ss_dssp -----------EEEEECCCTTSCCSSSTTSSHHHHHHHHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEESTT
T ss_pred -----------EEEEcCCCCCCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECCC
Confidence 122 11 01 111134444454456789999999999999999994 78777
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.87 E-value=1.9e-05 Score=77.52 Aligned_cols=99 Identities=13% Similarity=0.167 Sum_probs=69.5
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-. .++.++....- .-
T Consensus 96 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~~------------------kp 153 (230)
T 3um9_A 96 TPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFD----HLISVDEVRLF------------------KP 153 (230)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCS----EEEEGGGTTCC------------------TT
T ss_pred CCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcc----eeEehhhcccC------------------CC
Confidence 567899999999999999999999999998888999998843111 11111111000 00
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEec
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAM 745 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 745 (753)
.|+--..+++.+.-....+++|||+.||+.|.+.|+++++|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~ 194 (230)
T 3um9_A 154 HQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGYPVCW 194 (230)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCCEEE
T ss_pred ChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCCEEEE
Confidence 11112333444443457899999999999999999999999
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.86 E-value=2.9e-05 Score=73.95 Aligned_cols=88 Identities=9% Similarity=-0.031 Sum_probs=65.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCC-hHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDN-KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
++.+++.++|++|++.|++++++||++ ...+..+.+.+|+...- ..++
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~~~f-----------------------------~~~~-- 116 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYF-----------------------------VHRE-- 116 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCTTTE-----------------------------EEEE--
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcHhhc-----------------------------ceeE--
Confidence 578999999999999999999999999 68899999999985311 0111
Q ss_pred eCchhHHHHHH----HHHHcCCeEEEEcCCcccHHHhhhcCceE
Q 004437 704 AEPRHKQEIVR----MLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 704 ~~p~~K~~~v~----~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
..+..|...++ .+.-....+++|||+.+|+.+.+.|++..
T Consensus 117 ~~~~~k~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~ 160 (187)
T 2wm8_A 117 IYPGSKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTC 160 (187)
T ss_dssp ESSSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTCEE
T ss_pred EEeCchHHHHHHHHHHcCCChHHEEEEeCCccChHHHHHcCCEE
Confidence 12233433333 33223467999999999999999999753
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=97.83 E-value=1.5e-05 Score=80.62 Aligned_cols=103 Identities=22% Similarity=0.270 Sum_probs=71.7
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...++.++.... ..-
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~------------------~kp 161 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYK---PDFLVTPDDVPA------------------GRP 161 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCC---CSCCBCGGGSSC------------------CTT
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccC---hHheecCCccCC------------------CCC
Confidence 45789999999999999999999999988888888887764321 011222221110 001
Q ss_pred CchhHHHHHHHHHHcC-CeEEEEcCCcccHHHhhhcC---ceEecCCCC
Q 004437 705 EPRHKQEIVRMLKEMG-EVVAMTGDGVNDAPALKLAD---IGVAMGITG 749 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~-~~v~~~GDg~ND~~~l~~A~---vgiamgi~g 749 (753)
.|+--..+++.+.-.. +.+++|||+.||+.|++.|| ++|++| ++
T Consensus 162 ~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~~~i~v~~~-~~ 209 (267)
T 1swv_A 162 YPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGMWTVGVILG-SS 209 (267)
T ss_dssp SSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTSEEEEECTT-CT
T ss_pred CHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCCEEEEEcCC-CC
Confidence 2333344555555445 78999999999999999999 788888 55
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.80 E-value=3.5e-05 Score=75.62 Aligned_cols=100 Identities=17% Similarity=0.168 Sum_probs=69.8
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.++++.|++.|+++.++|+.....+..+.+.+|+...- ..++.++... ...-
T Consensus 83 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f----~~i~~~~~~~------------------~~Kp 140 (222)
T 2nyv_A 83 KPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYF----DLIVGGDTFG------------------EKKP 140 (222)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC----SEEECTTSSC------------------TTCC
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHh----eEEEecCcCC------------------CCCC
Confidence 46789999999999999999999999998888999999974311 1111111100 0011
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce-EecC
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG-VAMG 746 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg 746 (753)
.|+--..+++.+.-....++++||+.||++|.+.||+. |++.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~ 183 (222)
T 2nyv_A 141 SPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALAL 183 (222)
T ss_dssp TTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEET
T ss_pred ChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEc
Confidence 23333445555554467899999999999999999987 5443
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.79 E-value=2.6e-05 Score=76.78 Aligned_cols=96 Identities=16% Similarity=0.125 Sum_probs=66.4
Q ss_pred CCchhHHHHHHHHhC-CCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 626 PRGGVDKAIDDCRGA-GIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~-gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+...-. ....+.... .
T Consensus 94 ~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~---------------------~ 148 (234)
T 2hcf_A 94 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFP----FGAFADDAL---------------------D 148 (234)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCS----CEECTTTCS---------------------S
T ss_pred cCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcC----cceecCCCc---------------------C
Confidence 568999999999999 99999999999988888899988853211 111111110 0
Q ss_pred CchhHHHH----HHHHH--HcCCeEEEEcCCcccHHHhhhcC---ceEecC
Q 004437 705 EPRHKQEI----VRMLK--EMGEVVAMTGDGVNDAPALKLAD---IGVAMG 746 (753)
Q Consensus 705 ~p~~K~~~----v~~l~--~~~~~v~~~GDg~ND~~~l~~A~---vgiamg 746 (753)
.+.-+..+ .+.+. -..+.+++|||+.||+.|.+.|| ++|++|
T Consensus 149 ~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~ 199 (234)
T 2hcf_A 149 RNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATG 199 (234)
T ss_dssp GGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCS
T ss_pred ccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC
Confidence 11112222 33333 23368999999999999999999 666666
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.78 E-value=2.6e-05 Score=76.86 Aligned_cols=99 Identities=8% Similarity=0.020 Sum_probs=70.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-. .++.++....- .-
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~~------------------kp 156 (233)
T 3umb_A 99 SAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFD----HVLSVDAVRLY------------------KT 156 (233)
T ss_dssp EECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCS----EEEEGGGTTCC------------------TT
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcC----EEEEecccCCC------------------Cc
Confidence 467899999999999999999999999999999999998853221 11111111000 00
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEec
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAM 745 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 745 (753)
.|+--..+++.+.-....+++|||+.||+.|.+.||++++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~ 197 (233)
T 3umb_A 157 APAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFW 197 (233)
T ss_dssp SHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEE
Confidence 11122334444444457899999999999999999999999
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.78 E-value=1.3e-05 Score=79.94 Aligned_cols=98 Identities=14% Similarity=0.158 Sum_probs=69.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|++.|++++++|+.....+..+.+.+|+...- ..++.++.+... .-
T Consensus 114 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f----~~~~~~~~~~~~------------------Kp 171 (243)
T 2hsz_A 114 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLF----SEMLGGQSLPEI------------------KP 171 (243)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC----SEEECTTTSSSC------------------TT
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheE----EEEEecccCCCC------------------Cc
Confidence 46789999999999999999999999999899999999984311 111222111000 00
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEe
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA 744 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 744 (753)
.|+--..+++.+.-....+++|||+.||++|.+.|+++++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i 211 (243)
T 2hsz_A 172 HPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVV 211 (243)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred CHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEE
Confidence 1233344555555446789999999999999999998743
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.73 E-value=2.9e-05 Score=78.74 Aligned_cols=101 Identities=15% Similarity=0.057 Sum_probs=70.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+.... ...++.++.... ..-
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~~------------------~kp 169 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYT---PASTVFATDVVR------------------GRP 169 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCC---CSEEECGGGSSS------------------CTT
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCC---CceEecHHhcCC------------------CCC
Confidence 46789999999999999999999999998888888888764320 011111111100 000
Q ss_pred CchhHHHHHHHHHHcC-CeEEEEcCCcccHHHhhhcC---ceEecC
Q 004437 705 EPRHKQEIVRMLKEMG-EVVAMTGDGVNDAPALKLAD---IGVAMG 746 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~-~~v~~~GDg~ND~~~l~~A~---vgiamg 746 (753)
.|.--..+++.+.-.. +.+++|||+.||+.|.+.|| ++|++|
T Consensus 170 ~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~~~v~v~~g 215 (277)
T 3iru_A 170 FPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGMWTVGVSCS 215 (277)
T ss_dssp SSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTCEEEEECSS
T ss_pred CHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCCeEEEEecC
Confidence 1222234445555456 78999999999999999999 678887
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.71 E-value=4.1e-05 Score=75.29 Aligned_cols=98 Identities=13% Similarity=0.161 Sum_probs=67.0
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCC---hHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEE
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDN---KSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS 702 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~---~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 702 (753)
+.+++.+.++.|++.|+++.++|+.. ...+....+.+|+...- ..++.++.....
T Consensus 100 ~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~~------------------ 157 (235)
T 2om6_A 100 VLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFI----DKTFFADEVLSY------------------ 157 (235)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGC----SEEEEHHHHTCC------------------
T ss_pred cCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHh----hhheeccccCCC------------------
Confidence 46899999999999999999999999 88788888888874311 111111111100
Q ss_pred eeCchhHHHHHHHHHHcCCeEEEEcCCc-ccHHHhhhcCceEec
Q 004437 703 RAEPRHKQEIVRMLKEMGEVVAMTGDGV-NDAPALKLADIGVAM 745 (753)
Q Consensus 703 ~~~p~~K~~~v~~l~~~~~~v~~~GDg~-ND~~~l~~A~vgiam 745 (753)
.-.|+--..+++.+.-..+.+++|||+. ||+.|.+.||++++|
T Consensus 158 kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~~~~ 201 (235)
T 2om6_A 158 KPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMWAVW 201 (235)
T ss_dssp TTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSEEEE
T ss_pred CCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCEEEE
Confidence 0011111223333333356899999999 999999999999999
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.67 E-value=3.7e-05 Score=78.86 Aligned_cols=108 Identities=19% Similarity=0.161 Sum_probs=66.6
Q ss_pred CCCchhHHHHHHHHhC-CCeEEEEcCCC---------------------hHHHHHHHHHcCCCCCCCccccccccchhhh
Q 004437 625 PPRGGVDKAIDDCRGA-GIEVMVITGDN---------------------KSTAEAICRQIKLFSGNEDLTGRSFTGKEFM 682 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~-gi~v~i~TGd~---------------------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~ 682 (753)
..++++.+.++.+++. |+++.+.|... ...+..+.+..|+..... ......
T Consensus 122 ~~~~~v~e~l~~l~~~~g~~l~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-------~~~~~~ 194 (289)
T 3gyg_A 122 FSKEKVEKLVKQLHENHNILLNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNIN-------RCNPLA 194 (289)
T ss_dssp CCHHHHHHHHHHHHHHSSCCCEEGGGTCGGGTTCCEEEECCCHHHHHHHHHHHHHHHHHHTEEEEEE-------ECCGGG
T ss_pred CCHHHHHHHHHHHHhhhCceeeecccccccceEEEEEEeccccccchHHHHHHHHHHHHcCCCEEEE-------Eccccc
Confidence 4668999999999998 99988888652 222233333333311000 000000
Q ss_pred ccCHHHHHHHHHhcCCeEEEeeCc--hhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 683 ALSSTQQIEALSKHGGKVFSRAEP--RHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 683 ~~~~~~~~~~~~~~~~~v~~~~~p--~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
.......+....| ..|...++.+.+. .+.++++||+.||++|++.|++|++|| |+.+
T Consensus 195 -----------~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~~-~~~~ 257 (289)
T 3gyg_A 195 -----------GDPEDSYDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLLK-NATQ 257 (289)
T ss_dssp -----------TCCTTEEEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEECT-TCCH
T ss_pred -----------cCCCCceEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEEC-CccH
Confidence 0000113333333 3577777766554 357999999999999999999999999 8764
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.67 E-value=5.9e-05 Score=74.78 Aligned_cols=100 Identities=13% Similarity=0.124 Sum_probs=68.7
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..++.++.... ..-
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~------------------~Kp 162 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVL----DSCLSADDLKI------------------YKP 162 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC----SEEEEGGGTTC------------------CTT
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHc----CEEEEccccCC------------------CCC
Confidence 47799999999999999999999999999899999999984311 11111111100 000
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcC---ceEecC
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLAD---IGVAMG 746 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~---vgiamg 746 (753)
.|+--..+++.+.-....+++|||+.||+.|.+.|| +++.+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~v~~~ 207 (240)
T 2no4_A 163 DPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQ 207 (240)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEEECTT
T ss_pred CHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCEEEEECCC
Confidence 122223344444444568999999999999999999 455556
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.65 E-value=5.7e-05 Score=75.05 Aligned_cols=91 Identities=15% Similarity=0.245 Sum_probs=66.1
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe-e
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR-A 704 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~ 704 (753)
+.+++.+.++.|+++|+++.++|+.....+..+.+.+|+. .- ..+++. .
T Consensus 111 ~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f-----------------------------~~~~~~~~ 160 (240)
T 2hi0_A 111 PFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SF-----------------------------DFALGEKS 160 (240)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TC-----------------------------SEEEEECT
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-ce-----------------------------eEEEecCC
Confidence 5588999999999999999999999888888888888874 21 112221 1
Q ss_pred Cch--hH----HHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce---EecC
Q 004437 705 EPR--HK----QEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG---VAMG 746 (753)
Q Consensus 705 ~p~--~K----~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg---iamg 746 (753)
.+. -| ..+++.+.-..+.+++|||+.||+.|.+.||+. |++|
T Consensus 161 ~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~~v~v~~~ 211 (240)
T 2hi0_A 161 GIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMDEIAVNWG 211 (240)
T ss_dssp TSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEESSS
T ss_pred CCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEEEECCC
Confidence 111 12 233344443456899999999999999999984 6666
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.64 E-value=8e-05 Score=72.98 Aligned_cols=90 Identities=12% Similarity=0.047 Sum_probs=68.7
Q ss_pred CCCchhHHHHHHHHhCC-CeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 625 PPRGGVDKAIDDCRGAG-IEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~g-i~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
++.+++.+.++.|++.| +++.++|+.....+..+.+.+|+.... ..+++.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f-----------------------------~~~~~~ 155 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYF-----------------------------DHIEVM 155 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGC-----------------------------SEEEEE
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhh-----------------------------heeeec
Confidence 45789999999999999 999999999888888888888874311 234444
Q ss_pred eCchhHHHHHHHHHH----cCCeEEEEcCCc-ccHHHhhhcCceEec
Q 004437 704 AEPRHKQEIVRMLKE----MGEVVAMTGDGV-NDAPALKLADIGVAM 745 (753)
Q Consensus 704 ~~p~~K~~~v~~l~~----~~~~v~~~GDg~-ND~~~l~~A~vgiam 745 (753)
..| |...++.+.+ ..+.+++|||+. ||+.|.+.|+++++|
T Consensus 156 ~kp--k~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~~v~ 200 (234)
T 3ddh_A 156 SDK--TEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGYGVH 200 (234)
T ss_dssp SCC--SHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCEEEE
T ss_pred CCC--CHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCeEEE
Confidence 334 3444443333 356899999996 999999999998887
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.64 E-value=4.6e-05 Score=75.01 Aligned_cols=99 Identities=10% Similarity=0.174 Sum_probs=69.4
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...-. .++.++.... ..-
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~------------------~Kp 152 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFD----HLLSVDPVQV------------------YKP 152 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS----EEEESGGGTC------------------CTT
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhh----eEEEecccCC------------------CCC
Confidence 467999999999999999999999999988888899998743111 1111111100 000
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEec
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAM 745 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 745 (753)
.|+--..+++.+.-....+++|||+.||+.|.+.||++++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~ 193 (232)
T 1zrn_A 153 DNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCW 193 (232)
T ss_dssp SHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEE
Confidence 12222334444443456799999999999999999999888
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.62 E-value=6.5e-05 Score=74.11 Aligned_cols=97 Identities=8% Similarity=0.007 Sum_probs=68.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+.+++.++++.|+ .|++++++|+.....+....+.+|+...-. .++.++...
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~---------------------- 159 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFK----KIILSEDLG---------------------- 159 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCS----EEEEGGGTT----------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhce----eEEEeccCC----------------------
Confidence 46789999999999 999999999999888888888888753211 111111110
Q ss_pred CchhHHHHH----HHHHHcCCeEEEEcCCc-ccHHHhhhcCceEecCCCC
Q 004437 705 EPRHKQEIV----RMLKEMGEVVAMTGDGV-NDAPALKLADIGVAMGITG 749 (753)
Q Consensus 705 ~p~~K~~~v----~~l~~~~~~v~~~GDg~-ND~~~l~~A~vgiamgi~g 749 (753)
...-|..++ +.+.-..+.+++|||+. ||+.|.+.||++++|. +.
T Consensus 160 ~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~~~~~~-~~ 208 (240)
T 3qnm_A 160 VLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGMHQAFY-NV 208 (240)
T ss_dssp CCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTCEEEEE-CC
T ss_pred CCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCCeEEEE-cC
Confidence 011122333 33332356899999995 9999999999999998 54
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.60 E-value=7.1e-05 Score=73.63 Aligned_cols=100 Identities=18% Similarity=0.095 Sum_probs=70.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+.+++.+.++.|++. +++.++|+.....+....+.+|+...-. .++.++... ..
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~----~~~~~~~~~--------------------~~ 154 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFD----SITTSEEAG--------------------FF 154 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCS----EEEEHHHHT--------------------BC
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcc----eeEeccccC--------------------CC
Confidence 4668999999999999 9999999999998888999998843111 111111110 01
Q ss_pred Cc--hhHHHHHHHHHHcCCeEEEEcCCc-ccHHHhhhcC---ceEecCCCCc
Q 004437 705 EP--RHKQEIVRMLKEMGEVVAMTGDGV-NDAPALKLAD---IGVAMGITGT 750 (753)
Q Consensus 705 ~p--~~K~~~v~~l~~~~~~v~~~GDg~-ND~~~l~~A~---vgiamgi~g~ 750 (753)
.| +--..+++.+.-..+.+++|||+. ||+.|.+.|| ++|++| ++.
T Consensus 155 kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~-~~~ 205 (234)
T 3u26_A 155 KPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLDRK-GEK 205 (234)
T ss_dssp TTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEECSS-STT
T ss_pred CcCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEECCC-CCc
Confidence 12 112334444444457899999997 9999999999 688888 654
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.60 E-value=7.7e-05 Score=73.99 Aligned_cols=97 Identities=15% Similarity=0.090 Sum_probs=67.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+.+++.+.++.|++.|+++.++|+.....+..+.+.+|+...- ..++.++... ..
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~--------------------~~ 149 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFF----EHVIISDFEG--------------------VK 149 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGC----SEEEEGGGGT--------------------CC
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhc----cEEEEeCCCC--------------------CC
Confidence 46789999999999999999999999988888889999874311 1111111110 00
Q ss_pred Cc--hhHHHHHHHHHHcCCeEEEEcCCc-ccHHHhhhcCceEec
Q 004437 705 EP--RHKQEIVRMLKEMGEVVAMTGDGV-NDAPALKLADIGVAM 745 (753)
Q Consensus 705 ~p--~~K~~~v~~l~~~~~~v~~~GDg~-ND~~~l~~A~vgiam 745 (753)
.| +--..+++.+.-..+.+++|||+. ||+.|.+.||+++++
T Consensus 150 Kp~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~~~~~ 193 (241)
T 2hoq_A 150 KPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVW 193 (241)
T ss_dssp TTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEE
T ss_pred CCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCCEEEE
Confidence 11 111233344443456899999998 999999999987554
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.59 E-value=5.3e-05 Score=73.54 Aligned_cols=94 Identities=15% Similarity=0.259 Sum_probs=69.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.+.++.|++ |+++.++|+.+...+..+.+.+|+...- ..+++.-
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f-----------------------------~~i~~~~ 133 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFF-----------------------------DGIYGSS 133 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGC-----------------------------SEEEEEC
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhe-----------------------------eeeecCC
Confidence 366899999999999 9999999999888888888899985321 1233221
Q ss_pred -CchhHHHHHHHH-HHc---CCeEEEEcCCcccHHHhhhcCc---eEecCCCC
Q 004437 705 -EPRHKQEIVRML-KEM---GEVVAMTGDGVNDAPALKLADI---GVAMGITG 749 (753)
Q Consensus 705 -~p~~K~~~v~~l-~~~---~~~v~~~GDg~ND~~~l~~A~v---giamgi~g 749 (753)
.+.-|-.+++.. ++. ...+++|||+.||+.|.+.||+ +|++| ++
T Consensus 134 ~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i~v~~~-~~ 185 (210)
T 2ah5_A 134 PEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKLAITWG-FG 185 (210)
T ss_dssp SSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESSS-SS
T ss_pred CCCCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEEEEcCC-CC
Confidence 122344444433 332 4579999999999999999998 88888 54
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.58 E-value=5.9e-05 Score=74.78 Aligned_cols=113 Identities=19% Similarity=0.163 Sum_probs=74.1
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
-++.|++.++++.|+++|++++++|+.....+..+.+ |+... ..++.++....-. .......+.....+.+
T Consensus 76 ~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-----~~v~~~~~~~~~~--~~~~~~~kp~p~~~~~ 146 (236)
T 2fea_A 76 AKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-----DRIYCNHASFDND--YIHIDWPHSCKGTCSN 146 (236)
T ss_dssp CCBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-----GGEEEEEEECSSS--BCEEECTTCCCTTCCS
T ss_pred CCCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-----CeEEeeeeEEcCC--ceEEecCCCCcccccc
Confidence 3578999999999999999999999999888888777 66331 1122221110000 0000000000010111
Q ss_pred eCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEec
Q 004437 704 AEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAM 745 (753)
Q Consensus 704 ~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 745 (753)
.....|..+++.+.-..+.++++||+.+|+.|.+.||+.++.
T Consensus 147 ~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~ 188 (236)
T 2fea_A 147 QCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR 188 (236)
T ss_dssp CCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC
T ss_pred ccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeec
Confidence 134568888888877788999999999999999999998864
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.57 E-value=1.7e-05 Score=76.86 Aligned_cols=97 Identities=10% Similarity=0.195 Sum_probs=67.5
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|++. +++.++|+.....+..+.+.+|+...- ..++.++... ..
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~--------------------~~ 137 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRM----AVTISADDTP--------------------KR 137 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGE----EEEECGGGSS--------------------CC
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhc----cEEEecCcCC--------------------CC
Confidence 3578999999999999 999999999988888888888873210 0111111100 01
Q ss_pred C--chhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 705 E--PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 705 ~--p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
. |+--..+++.+.-....+++|||+.||+.|.+.||++++|.
T Consensus 138 KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~~~~~ 181 (209)
T 2hdo_A 138 KPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLA 181 (209)
T ss_dssp TTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEE
T ss_pred CCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCeEEEE
Confidence 1 22223444444434568999999999999999999999974
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.56 E-value=0.0002 Score=67.76 Aligned_cols=96 Identities=14% Similarity=0.086 Sum_probs=63.1
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 705 (753)
+.+++.+.++.|++.|++++++|+... .+....+.+|+...- ..++.++... ...-.
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f----~~~~~~~~~~------------------~~kp~ 139 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYF----TEVVTSSSGF------------------KRKPN 139 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGE----EEEECGGGCC------------------CCTTS
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhe----eeeeeccccC------------------CCCCC
Confidence 578999999999999999999998864 566777888774210 1111111110 00001
Q ss_pred chhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 706 PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 706 p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
|+--..+++.+.- . .++++||+.||++|.+.|++++++-
T Consensus 140 ~~~~~~~~~~~~~-~-~~~~iGD~~~Di~~a~~aG~~~~~~ 178 (190)
T 2fi1_A 140 PESMLYLREKYQI-S-SGLVIGDRPIDIEAGQAAGLDTHLF 178 (190)
T ss_dssp CHHHHHHHHHTTC-S-SEEEEESSHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHcCC-C-eEEEEcCCHHHHHHHHHcCCeEEEE
Confidence 2212233333322 2 7999999999999999999998886
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0001 Score=71.30 Aligned_cols=100 Identities=11% Similarity=0.031 Sum_probs=67.8
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH------cCCCCCCCccccccccchhhhccCHHHHHHHHHhcCC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ------IKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGG 698 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (753)
++.+++.+.++.|++ |++++++|+.....+..+.+. .|+...- ..++.++...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~l~~~~~~~l~~~f----~~~~~~~~~~---------------- 147 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSPRFLPSGRTLDSFF----DKVYASCQMG---------------- 147 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTSTTSSTTCCCGGGGS----SEEEEHHHHT----------------
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhhhccccccCHHHHc----CeEEeecccC----------------
Confidence 357899999999999 999999999988877777666 5653211 1111111110
Q ss_pred eEEEeeCc--hhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCc
Q 004437 699 KVFSRAEP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGT 750 (753)
Q Consensus 699 ~v~~~~~p--~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~ 750 (753)
...| +--..+++.+.-..+.+++|||+.||+.|.+.||++++|. ++.
T Consensus 148 ----~~Kp~~~~~~~~~~~~~~~~~~~~~igD~~~Di~~a~~aG~~~~~~-~~~ 196 (211)
T 2i6x_A 148 ----KYKPNEDIFLEMIADSGMKPEETLFIDDGPANVATAERLGFHTYCP-DNG 196 (211)
T ss_dssp ----CCTTSHHHHHHHHHHHCCCGGGEEEECSCHHHHHHHHHTTCEEECC-CTT
T ss_pred ----CCCCCHHHHHHHHHHhCCChHHeEEeCCCHHHHHHHHHcCCEEEEE-CCH
Confidence 0112 2223344444444568999999999999999999999998 543
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.52 E-value=3.4e-05 Score=77.57 Aligned_cols=101 Identities=14% Similarity=0.089 Sum_probs=67.7
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccc-cccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGR-SFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
.+.+++.+.++.|++.|++++++|+.....+..+.+.+|+...- .. ++.++.... ...
T Consensus 110 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f----~~~i~~~~~~~~-----------------~~K 168 (259)
T 4eek_A 110 TAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTELA----GEHIYDPSWVGG-----------------RGK 168 (259)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHHHH----CSCEECGGGGTT-----------------CCT
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHhhc----cceEEeHhhcCc-----------------CCC
Confidence 35689999999999999999999999999999999999874210 01 111111100 000
Q ss_pred eCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce-EecC
Q 004437 704 AEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG-VAMG 746 (753)
Q Consensus 704 ~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg 746 (753)
-.|+--..+++.+.-..+.+++|||+.||+.|.+.||++ |.+.
T Consensus 169 p~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~~~i~v~ 212 (259)
T 4eek_A 169 PHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAAGATLWGLL 212 (259)
T ss_dssp TSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEC
T ss_pred CChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCEEEEEc
Confidence 011112333444433357899999999999999999998 4443
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.0001 Score=73.09 Aligned_cols=98 Identities=11% Similarity=0.027 Sum_probs=62.9
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
.++.+++.+.++.|++.|+++.++|+.....+....+. |+...-.. ..+++++.... ..
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~--~~~~~~~~~~~------------------~k 165 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQA--NLMVTAFDVKY------------------GK 165 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCG--GGEECGGGCSS------------------CT
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCC--CeEEecccCCC------------------CC
Confidence 35679999999999999999999999988777776666 77432100 11222221100 00
Q ss_pred eCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 704 AEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 704 ~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
-.|+--..+++.+.-..+.+++|||+.||+.|.+.||+.
T Consensus 166 p~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~ 204 (247)
T 3dv9_A 166 PNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGIF 204 (247)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTSE
T ss_pred CCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCCe
Confidence 112223344555554467899999999999999999964
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.50 E-value=7.8e-05 Score=74.02 Aligned_cols=103 Identities=14% Similarity=0.103 Sum_probs=66.5
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|++.|+++.++|+.....+....+. |+...-.. ..++.++.... ..-
T Consensus 109 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~--d~i~~~~~~~~------------------~kp 167 (243)
T 3qxg_A 109 ERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHK--ELMVTAFDVKY------------------GKP 167 (243)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCG--GGEECTTTCSS------------------CTT
T ss_pred CCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCc--ceEEeHHhCCC------------------CCC
Confidence 4678999999999999999999999987777766666 76432100 11222221100 001
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc-eEecCCCC
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI-GVAMGITG 749 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v-giamgi~g 749 (753)
.|+--..+++.+.-..+.+++|||+.||+.|.+.|++ +|+++ +|
T Consensus 168 ~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~~~i~v~-~~ 212 (243)
T 3qxg_A 168 NPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGIFTIAVN-TG 212 (243)
T ss_dssp SSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTCEEEEEC-CS
T ss_pred ChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCEEEEEe-CC
Confidence 1222233444444345789999999999999999998 44454 44
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00015 Score=70.54 Aligned_cols=104 Identities=13% Similarity=0.074 Sum_probs=63.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHcCCCCCCCccccccccchhhhccCHHHH
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNK---------------STAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQ 689 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (753)
++.+++.++|++|+++|++++++|+... ..+..+.+.+|+. -.. .............
T Consensus 50 ~~~pg~~e~L~~L~~~G~~~~ivTn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-f~~----~~~~~~~~~~~~~--- 121 (211)
T 2gmw_A 50 EFIDGVIDAMRELKKMGFALVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVD-LDG----IYYCPHHPQGSVE--- 121 (211)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEECTHHHHTSSCHHHHHHHHHHHHHHHHHTTCC-CSE----EEEECCBTTCSSG---
T ss_pred cCCcCHHHHHHHHHHCCCeEEEEECcCCcCCCccCHHHHHHHHHHHHHHHHHcCCc-eEE----EEECCcCCCCccc---
Confidence 6789999999999999999999999993 6677778888874 100 0000000000000
Q ss_pred HHHHHhcCCeE-EEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc
Q 004437 690 IEALSKHGGKV-FSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 690 ~~~~~~~~~~v-~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
.+...+ ...-.|+--..+++.+.-..+.++||||+.||+.|.+.|++
T Consensus 122 -----~~~~~~~~~KP~p~~~~~~~~~lgi~~~~~~~VGD~~~Di~~a~~aG~ 169 (211)
T 2gmw_A 122 -----EFRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAVAANV 169 (211)
T ss_dssp -----GGBSCCSSSTTSCHHHHHHHHHHTBCGGGCEEEESSHHHHHHHHHTTC
T ss_pred -----ccCccCcCCCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCC
Confidence 000000 00011222233444444445679999999999999999995
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.0002 Score=68.62 Aligned_cols=99 Identities=14% Similarity=0.081 Sum_probs=68.9
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|++.| +++++|+.+...+..+.+.+|+...-. .++.+..... ..-
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~----~~~~~~~~~~------------------~Kp 142 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLL----AFFTSSALGV------------------MKP 142 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCS----CEEEHHHHSC------------------CTT
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcc----eEEeecccCC------------------CCC
Confidence 36799999999999999 999999999988888888888743211 1111111100 001
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
.|+--..+++.+.-..+.+++|||+.||+.|.+.|++.+++-
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 184 (200)
T 3cnh_A 143 NPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQC 184 (200)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEC
T ss_pred CHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEEE
Confidence 122223344444444568999999999999999999988765
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.49 E-value=3.8e-05 Score=76.71 Aligned_cols=99 Identities=22% Similarity=0.228 Sum_probs=62.0
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHH-HHcCCCCCCCccccccccch--hhhccCHHHHHHHHHhcCCeEE
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAIC-RQIKLFSGNEDLTGRSFTGK--EFMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia-~~~gi~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~ 701 (753)
.+.+++.+.++.|++.|+++.++|+.....+.... +..|+...- ..++.++ ..
T Consensus 112 ~~~~~~~~~l~~l~~~g~~~~i~sn~~~~~~~~~l~~~~~l~~~f----~~~~~~~~~~~-------------------- 167 (250)
T 3l5k_A 112 ALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLF----SHIVLGDDPEV-------------------- 167 (250)
T ss_dssp CBCTTHHHHHHHHHHTTCCEEEECSCCHHHHHHHTTTCHHHHTTS----SCEECTTCTTC--------------------
T ss_pred CCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHhccCHHhhe----eeEEecchhhc--------------------
Confidence 47889999999999999999999999876554432 222332110 0111111 00
Q ss_pred EeeCchhHHHHHHH-HHHc---C--CeEEEEcCCcccHHHhhhcC---ceEecCCCCc
Q 004437 702 SRAEPRHKQEIVRM-LKEM---G--EVVAMTGDGVNDAPALKLAD---IGVAMGITGT 750 (753)
Q Consensus 702 ~~~~p~~K~~~v~~-l~~~---~--~~v~~~GDg~ND~~~l~~A~---vgiamgi~g~ 750 (753)
....| |..+++. +++. . +.+++|||+.||+.|.+.|| ++|++| ++.
T Consensus 168 ~~~Kp--~~~~~~~~~~~lgi~~~~~~~i~iGD~~~Di~~a~~aG~~~i~v~~~-~~~ 222 (250)
T 3l5k_A 168 QHGKP--DPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMVPDG-NLS 222 (250)
T ss_dssp CSCTT--STHHHHHHHHTSSSCCCGGGEEEEESSHHHHHHHHHTTCEEEECCCT-TSC
T ss_pred cCCCC--ChHHHHHHHHHcCCCCCcceEEEEeCCHHHHHHHHHcCCEEEEEcCC-CCc
Confidence 00111 1223333 2332 3 78999999999999999999 677778 543
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00011 Score=74.80 Aligned_cols=97 Identities=14% Similarity=0.001 Sum_probs=68.3
Q ss_pred CCchhHHHHHHHHhC-CCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 626 PRGGVDKAIDDCRGA-GIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~-gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
+.+++.+.++.|++. |+++.++|+.....+....+.+|+..- ..+++++....- .-
T Consensus 115 ~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~f-----~~i~~~~~~~~~------------------kp 171 (275)
T 2qlt_A 115 EVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKRP-----EYFITANDVKQG------------------KP 171 (275)
T ss_dssp ECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCCC-----SSEECGGGCSSC------------------TT
T ss_pred cCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCcc-----CEEEEcccCCCC------------------CC
Confidence 468999999999999 999999999999888888888887421 122233221100 00
Q ss_pred CchhHHHHHHHHHH-------cCCeEEEEcCCcccHHHhhhcCceEec
Q 004437 705 EPRHKQEIVRMLKE-------MGEVVAMTGDGVNDAPALKLADIGVAM 745 (753)
Q Consensus 705 ~p~~K~~~v~~l~~-------~~~~v~~~GDg~ND~~~l~~A~vgiam 745 (753)
.|+--..+.+.+.- ..+.+++|||+.||+.|++.||++++|
T Consensus 172 ~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG~~~i~ 219 (275)
T 2qlt_A 172 HPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAGCKIVG 219 (275)
T ss_dssp SSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTTCEEEE
T ss_pred ChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcCCEEEE
Confidence 12222344455544 456799999999999999999976655
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.00025 Score=70.69 Aligned_cols=91 Identities=16% Similarity=0.082 Sum_probs=67.6
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+.+++.+.++.|+ .|+++.++|+.....+....+.+|+...- ..+++..
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f-----------------------------~~i~~~~ 161 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLF-----------------------------PRIEVVS 161 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTC-----------------------------CCEEEES
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhC-----------------------------ceeeeeC
Confidence 45799999999999 99999999999988888888888874321 1233333
Q ss_pred Cch--hHHHHHHHHHHcCCeEEEEcCCc-ccHHHhhhcCceEec
Q 004437 705 EPR--HKQEIVRMLKEMGEVVAMTGDGV-NDAPALKLADIGVAM 745 (753)
Q Consensus 705 ~p~--~K~~~v~~l~~~~~~v~~~GDg~-ND~~~l~~A~vgiam 745 (753)
.|. --..+++.+.-..+.+++|||+. ||+.|.+.||+++++
T Consensus 162 kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~ 205 (251)
T 2pke_A 162 EKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIY 205 (251)
T ss_dssp CCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEE
T ss_pred CCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEE
Confidence 332 22333444443457899999999 999999999998775
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00012 Score=70.34 Aligned_cols=95 Identities=8% Similarity=0.085 Sum_probs=66.8
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+ ++.|++. +++.++|+.+...+..+.+.+|+...- ..++.++....- .-
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~~~------------------Kp 129 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYF----KGIFSAESVKEY------------------KP 129 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGC----SEEEEGGGGTCC------------------TT
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhC----cEEEehhhcCCC------------------CC
Confidence 46789999 9999999 999999999988888899999884311 111222111000 00
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEec
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAM 745 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 745 (753)
.|+--..+++.+. ...+++|||+.||+.|.+.|+++++|
T Consensus 130 ~~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~ 168 (201)
T 2w43_A 130 SPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIF 168 (201)
T ss_dssp CHHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEE
Confidence 1222234445555 57899999999999999999999877
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00017 Score=72.20 Aligned_cols=100 Identities=10% Similarity=0.057 Sum_probs=69.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|+ |+++.++|+.+...+..+.+.+|+...- ..++.++.... ..-
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f----~~~~~~~~~~~------------------~Kp 148 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF----DAVISVDAKRV------------------FKP 148 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC----SEEEEGGGGTC------------------CTT
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhc----cEEEEccccCC------------------CCC
Confidence 57799999999999 9999999999999999999999874311 11111111100 000
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCC
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITG 749 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g 749 (753)
.|+--..+++.+.-....+++|||+.||+.|.+.|+++++|. +.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~-~~ 192 (253)
T 1qq5_A 149 HPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARV-AR 192 (253)
T ss_dssp SHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEE-CC
T ss_pred CHHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEE-CC
Confidence 112223334444333568999999999999999999999887 54
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00033 Score=69.62 Aligned_cols=95 Identities=9% Similarity=0.016 Sum_probs=67.4
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|++. +++.++|+.....+..+.+.+|+.- ..++.++.+.. .
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~f------~~~~~~~~~~~--------------------~ 168 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIPW------DVIIGSDINRK--------------------Y 168 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCCC------SCCCCHHHHTC--------------------C
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCCe------eEEEEcCcCCC--------------------C
Confidence 4678999999999997 9999999999998989999998841 11222221110 1
Q ss_pred Cch--hHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 705 EPR--HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 705 ~p~--~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
.|. -=..+++.+.-..+.+++|||+.||+.|.+.||++++|.
T Consensus 169 kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~ 212 (254)
T 3umg_A 169 KPDPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATAFI 212 (254)
T ss_dssp TTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEEEE
T ss_pred CCCHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEEEE
Confidence 121 111222223223468999999999999999999999998
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00029 Score=70.20 Aligned_cols=98 Identities=12% Similarity=0.093 Sum_probs=68.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|++. ++++++|+.....+..+.+.+|+.- ..++.++....- .-
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~f------~~~~~~~~~~~~------------------kp 174 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLPW------DMLLCADLFGHY------------------KP 174 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCCC------SEECCHHHHTCC------------------TT
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCCc------ceEEeecccccC------------------CC
Confidence 3568999999999986 9999999999988888889998741 112222111000 00
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCC
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGIT 748 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~ 748 (753)
.|+--..+++.+.-..+.+++|||+.||+.|.+.||++++|. +
T Consensus 175 ~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~~~-~ 217 (254)
T 3umc_A 175 DPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLKTAFI-A 217 (254)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEEE-C
T ss_pred CHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCeEEEE-e
Confidence 111122333444434578999999999999999999999998 5
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00019 Score=70.13 Aligned_cols=103 Identities=11% Similarity=0.124 Sum_probs=65.4
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.++. +++++|+........+.+.+|+...- ...+++++... . ..+ .-
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~---~~~~~~~~~~~------------~--~~~--kp 144 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYF---APHIYSAKDLG------------A--DRV--KP 144 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGT---TTCEEEHHHHC------------T--TCC--TT
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhc---cceEEeccccc------------c--CCC--Cc
Confidence 356788888887764 89999999998888888888874311 01111211110 0 000 00
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce-EecCCCCc
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG-VAMGITGT 750 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamgi~g~ 750 (753)
.|+--..+++.+.-..+.+++|||+.||++|++.||++ |+|+ ++.
T Consensus 145 k~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~~i~~~-~~~ 190 (229)
T 2fdr_A 145 KPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGFT-GAS 190 (229)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEEC-CST
T ss_pred CHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHCCCEEEEEe-cCC
Confidence 11222344444444457899999999999999999998 7777 654
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00044 Score=67.97 Aligned_cols=92 Identities=16% Similarity=0.179 Sum_probs=63.5
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+.+++.+.++.|++. +++.++|+.....+....+.+|+...- ..++.++...
T Consensus 103 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f----~~~~~~~~~~---------------------- 155 (238)
T 3ed5_A 103 QLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFF----KDIFVSEDTG---------------------- 155 (238)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGC----SEEEEGGGTT----------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhh----heEEEecccC----------------------
Confidence 5678999999999999 999999999998888888888875311 1111111110
Q ss_pred CchhHHHHHHH-HHHcC----CeEEEEcCCc-ccHHHhhhcCceE
Q 004437 705 EPRHKQEIVRM-LKEMG----EVVAMTGDGV-NDAPALKLADIGV 743 (753)
Q Consensus 705 ~p~~K~~~v~~-l~~~~----~~v~~~GDg~-ND~~~l~~A~vgi 743 (753)
...-|...++. +++.| +.+++|||+. ||+.|.+.||++.
T Consensus 156 ~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~aG~~~ 200 (238)
T 3ed5_A 156 FQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLAGLDT 200 (238)
T ss_dssp SCTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHTTCEE
T ss_pred CCCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHCCCEE
Confidence 01112233332 22334 5799999998 9999999999953
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00036 Score=70.42 Aligned_cols=44 Identities=9% Similarity=0.104 Sum_probs=36.8
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcC---CChHHHHHHHHHcCCCC
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITG---DNKSTAEAICRQIKLFS 666 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TG---d~~~~a~~ia~~~gi~~ 666 (753)
.+.+-++++++|++|+++|++++++|| ++........+.+|+..
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~ 68 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEV 68 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCC
Confidence 344668899999999999999999999 67777777788888853
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00027 Score=62.88 Aligned_cols=94 Identities=10% Similarity=0.099 Sum_probs=63.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.+++++|+++|+++.++|+.+...+..+.+.+|+...-. .++.+.... ..
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l~~~f~----~i~~~~~~~--------------------~~ 73 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELETNGVVD----KVLLSGELG--------------------VE 73 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHHTTSSS----EEEEHHHHS--------------------CC
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCChHhhcc----EEEEeccCC--------------------CC
Confidence 367899999999999999999999999888888888887643211 111111100 01
Q ss_pred Cc--hhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 705 EP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 705 ~p--~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
.| +--..+++.+.-....++++||+.+|+.+.+.|++.
T Consensus 74 Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~~G~~ 113 (137)
T 2pr7_A 74 KPEEAAFQAAADAIDLPMRDCVLVDDSILNVRGAVEAGLV 113 (137)
T ss_dssp TTSHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred CCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCE
Confidence 12 112223333333345799999999999999999974
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00026 Score=71.34 Aligned_cols=98 Identities=20% Similarity=0.260 Sum_probs=67.8
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 705 (753)
+.+++.++++.|++.|+++.++|+... .+..+.+.+|+...-. .++.++.... ..-.
T Consensus 107 ~~~~~~~~l~~l~~~g~~~~i~tn~~~-~~~~~l~~~gl~~~f~----~~~~~~~~~~------------------~Kp~ 163 (263)
T 3k1z_A 107 VLDGAEDTLRECRTRGLRLAVISNFDR-RLEGILGGLGLREHFD----FVLTSEAAGW------------------PKPD 163 (263)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEEESCCT-THHHHHHHTTCGGGCS----CEEEHHHHSS------------------CTTS
T ss_pred ECcCHHHHHHHHHhCCCcEEEEeCCcH-HHHHHHHhCCcHHhhh----EEEeecccCC------------------CCCC
Confidence 569999999999999999999999765 4678888888743211 1111111100 0011
Q ss_pred chhHHHHHHHHHHcCCeEEEEcCCc-ccHHHhhhcCceEecC
Q 004437 706 PRHKQEIVRMLKEMGEVVAMTGDGV-NDAPALKLADIGVAMG 746 (753)
Q Consensus 706 p~~K~~~v~~l~~~~~~v~~~GDg~-ND~~~l~~A~vgiamg 746 (753)
|+--..+++.+.-....+++|||+. ||+.|.+.||++++|.
T Consensus 164 ~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~ 205 (263)
T 3k1z_A 164 PRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLV 205 (263)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEE
T ss_pred HHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEE
Confidence 2223344455544467899999997 9999999999999998
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0009 Score=63.59 Aligned_cols=91 Identities=10% Similarity=0.142 Sum_probs=66.4
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCCh---HHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeE
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNK---STAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKV 700 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~---~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 700 (753)
-++.+++.++++.|+++|+++.++|+... ..+..+.+.+|+...- ..+
T Consensus 33 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~f-----------------------------d~i 83 (189)
T 3ib6_A 33 VVLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYF-----------------------------DFI 83 (189)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGE-----------------------------EEE
T ss_pred ceeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhhe-----------------------------EEE
Confidence 35889999999999999999999998876 7888899999985311 112
Q ss_pred EEee---------Cc--hhHHHHHHHHHHcCCeEEEEcCC-cccHHHhhhcCceE
Q 004437 701 FSRA---------EP--RHKQEIVRMLKEMGEVVAMTGDG-VNDAPALKLADIGV 743 (753)
Q Consensus 701 ~~~~---------~p--~~K~~~v~~l~~~~~~v~~~GDg-~ND~~~l~~A~vgi 743 (753)
++.. .| +--..+++.+.-....+++|||+ .+|+.+-+.||+..
T Consensus 84 ~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~ 138 (189)
T 3ib6_A 84 YASNSELQPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHA 138 (189)
T ss_dssp EECCTTSSTTCCCTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEE
T ss_pred EEccccccccCCCCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 2211 11 22233444444445789999999 79999999999853
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00067 Score=66.15 Aligned_cols=106 Identities=20% Similarity=0.071 Sum_probs=63.3
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCCh---------------HHHHHHHHHcCCCCCCCccccccccchhhhccCHHH
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNK---------------STAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQ 688 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 688 (753)
.++.+++.++|++|+++|++++++|+... ..+..+.+.+|+.-. ..+... .+.. ..+.
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-~~~~~~--~~~~-g~~~--- 127 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSGIARGYFGWSAFAAVNGRVLELLREEGVFVD-MVLACA--YHEA-GVGP--- 127 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHHHHTTSCCHHHHHHHHHHHHHHHHHTTCCCS-EEEEEC--CCTT-CCST---
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCCCCcccccHHHHHHHHHHHHHHHHHcCCcee-eEEEee--cCCC-Ccee---
Confidence 46789999999999999999999999987 567778888886310 000000 0000 0000
Q ss_pred HHHHHHhcCCeEEEeeCch--hHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceE
Q 004437 689 QIEALSKHGGKVFSRAEPR--HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 689 ~~~~~~~~~~~v~~~~~p~--~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
.....+. ...|. -=..+.+.+.-..+.++||||+.||+.|.+.|++..
T Consensus 128 ------~~~~~~~-~~KP~~~~~~~~~~~~~i~~~~~~~VGD~~~Di~~a~~aG~~~ 177 (218)
T 2o2x_A 128 ------LAIPDHP-MRKPNPGMLVEAGKRLALDLQRSLIVGDKLADMQAGKRAGLAQ 177 (218)
T ss_dssp ------TCCSSCT-TSTTSCHHHHHHHHHHTCCGGGCEEEESSHHHHHHHHHTTCSE
T ss_pred ------ecccCCc-cCCCCHHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHCCCCE
Confidence 0000000 00111 112233333333567999999999999999999754
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00056 Score=68.93 Aligned_cols=43 Identities=5% Similarity=0.056 Sum_probs=36.1
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcC---CChHHHHHHHHHcCCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITG---DNKSTAEAICRQIKLFS 666 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TG---d~~~~a~~ia~~~gi~~ 666 (753)
+.+-++++++|++|+++|++++++|| ++........+++|+..
T Consensus 21 ~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~ 66 (266)
T 3pdw_A 21 TEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPA 66 (266)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCC
T ss_pred CEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 34557899999999999999999988 67777777888888854
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00051 Score=68.01 Aligned_cols=85 Identities=13% Similarity=0.251 Sum_probs=66.9
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChH----HHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCC
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKS----TAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGG 698 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~----~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (753)
..++.|++.+.++.|+++|+++.++||++.. .+..-.+.+||..... .
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~~~~~----------------------------~ 150 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFTGVND----------------------------K 150 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCCCCST----------------------------T
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcCcccc----------------------------c
Confidence 3567899999999999999999999999764 6677788899953211 1
Q ss_pred eEEEeeCchhHHHHHHHHHHcC-CeEEEEcCCcccHHH
Q 004437 699 KVFSRAEPRHKQEIVRMLKEMG-EVVAMTGDGVNDAPA 735 (753)
Q Consensus 699 ~v~~~~~p~~K~~~v~~l~~~~-~~v~~~GDg~ND~~~ 735 (753)
.++.|.....|....+.+.+.| ..|+++||..+|.++
T Consensus 151 ~Lilr~~~~~K~~~r~~L~~~gy~iv~~iGD~~~Dl~~ 188 (260)
T 3pct_A 151 TLLLKKDKSNKSVRFKQVEDMGYDIVLFVGDNLNDFGD 188 (260)
T ss_dssp TEEEESSCSSSHHHHHHHHTTTCEEEEEEESSGGGGCG
T ss_pred eeEecCCCCChHHHHHHHHhcCCCEEEEECCChHHcCc
Confidence 3566655677888888888754 468899999999986
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00012 Score=70.55 Aligned_cols=93 Identities=13% Similarity=0.123 Sum_probs=61.5
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH-cCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ-IKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
++.+++.+.++.|++.|++++++|+.....+..+... +|+.. .. ..+++.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~~~~l~~-------------------------~f----~~~~~~ 141 (206)
T 2b0c_A 91 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRD-------------------------AA----DHIYLS 141 (206)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHH-------------------------HC----SEEEEH
T ss_pred ccCccHHHHHHHHHHCCCeEEEEECCChHHHHHHHHhccChhh-------------------------he----eeEEEe
Confidence 4679999999999999999999999765543322222 22210 00 112221
Q ss_pred -----eCch--hHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 704 -----AEPR--HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 704 -----~~p~--~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
..|. --..+++.+.-....++++||+.||+.|.+.||+..++.
T Consensus 142 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~~ 191 (206)
T 2b0c_A 142 QDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILV 191 (206)
T ss_dssp HHHTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEEC
T ss_pred cccCCCCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEEe
Confidence 1122 233444555444578999999999999999999988876
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0011 Score=65.10 Aligned_cols=97 Identities=9% Similarity=0.111 Sum_probs=64.5
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.++++.|++ |+++.++|+.....+....+.++- ....++.++++... .-
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~------~fd~i~~~~~~~~~------------------KP 153 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV------EFDHIITAQDVGSY------------------KP 153 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS------CCSEEEEHHHHTSC------------------TT
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC------ccCEEEEccccCCC------------------CC
Confidence 577999999999999 899999999998777766665431 11112222211100 01
Q ss_pred CchhHHHHHHHHHH---cCCeEEEEcCCc-ccHHHhhhcCceEecC
Q 004437 705 EPRHKQEIVRMLKE---MGEVVAMTGDGV-NDAPALKLADIGVAMG 746 (753)
Q Consensus 705 ~p~~K~~~v~~l~~---~~~~v~~~GDg~-ND~~~l~~A~vgiamg 746 (753)
.|+-...+++.+++ ..+.+++|||+. ||+.|.+.||++++|.
T Consensus 154 ~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~~~ 199 (240)
T 3smv_A 154 NPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSAWI 199 (240)
T ss_dssp SHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEEEE
T ss_pred CHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEEEE
Confidence 12222344333333 356899999996 9999999999999995
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.00076 Score=66.11 Aligned_cols=102 Identities=10% Similarity=0.043 Sum_probs=66.8
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH------cCCCCCCCccccccccchhhhccCHHHHHHHHHhcCC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ------IKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGG 698 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~------~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (753)
++.+++.++++.|++. +++.++|+.....+..+.+. +|+...- ..++.+....
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~~l~~~~~~~l~~~f----d~i~~~~~~~---------------- 170 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCKNAFPYRTFKVEDYF----EKTYLSYEMK---------------- 170 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHHHTSCBTTBCHHHHC----SEEEEHHHHT----------------
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHhhhhhhccCCHHHhC----CEEEeecccC----------------
Confidence 3569999999999999 99999999998887766633 3432100 0011111100
Q ss_pred eEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCc
Q 004437 699 KVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGT 750 (753)
Q Consensus 699 ~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~ 750 (753)
...-.|+--..+++.+.-..+.+++|||+.||+.|.+.||+++++. ++.
T Consensus 171 --~~KP~~~~~~~~~~~~g~~~~~~~~vGD~~~Di~~a~~aG~~~i~v-~~~ 219 (229)
T 4dcc_A 171 --MAKPEPEIFKAVTEDAGIDPKETFFIDDSEINCKVAQELGISTYTP-KAG 219 (229)
T ss_dssp --CCTTCHHHHHHHHHHHTCCGGGEEEECSCHHHHHHHHHTTCEEECC-CTT
T ss_pred --CCCCCHHHHHHHHHHcCCCHHHeEEECCCHHHHHHHHHcCCEEEEE-CCH
Confidence 0001122223444555444678999999999999999999999988 543
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=96.93 E-value=0.00057 Score=67.75 Aligned_cols=85 Identities=14% Similarity=0.181 Sum_probs=66.3
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCCh----HHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCC
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNK----STAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGG 698 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (753)
..++.|++.+.++.|+++|+++.++||++. ..+..-.+.+||..-.. .
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~~~~----------------------------~ 150 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNGVEE----------------------------S 150 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSCCSG----------------------------G
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCcccc----------------------------c
Confidence 456789999999999999999999999975 36667788899853110 1
Q ss_pred eEEEeeCchhHHHHHHHHHHcC-CeEEEEcCCcccHHH
Q 004437 699 KVFSRAEPRHKQEIVRMLKEMG-EVVAMTGDGVNDAPA 735 (753)
Q Consensus 699 ~v~~~~~p~~K~~~v~~l~~~~-~~v~~~GDg~ND~~~ 735 (753)
.++.|.....|....+.+.+.| ..|+++||..+|.++
T Consensus 151 ~Lilr~~~~~K~~~r~~l~~~Gy~iv~~vGD~~~Dl~~ 188 (262)
T 3ocu_A 151 AFYLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGN 188 (262)
T ss_dssp GEEEESSCSCCHHHHHHHHHTTEEEEEEEESSGGGGCS
T ss_pred ceeccCCCCChHHHHHHHHhcCCCEEEEECCChHHhcc
Confidence 4566655567888888888774 468999999999986
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0036 Score=62.74 Aligned_cols=41 Identities=10% Similarity=0.115 Sum_probs=36.2
Q ss_pred CCchhHHHHHHHHhCCCeEEEEc---CCChHHHHHHHHHcCCCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVIT---GDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~T---Gd~~~~a~~ia~~~gi~~ 666 (753)
+.+++.++++.+++.|++++++| |+.........+++|+..
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~ 76 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDI 76 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCC
Confidence 56788999999999999999999 999988888888888753
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0018 Score=65.20 Aligned_cols=43 Identities=9% Similarity=0.006 Sum_probs=38.0
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEc---CCChHHHHHHHHHcCCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVIT---GDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~T---Gd~~~~a~~ia~~~gi~~ 666 (753)
.++.+++.++|++|+++|++++++| |+.........+++|+..
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 5567899999999999999999999 889888888888888853
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=96.66 E-value=0.00061 Score=68.58 Aligned_cols=43 Identities=16% Similarity=0.227 Sum_probs=36.7
Q ss_pred hhHHHHHHHHHHc--CCeEEEEcC----CcccHHHhhhcC-ceEecCCCCcc
Q 004437 707 RHKQEIVRMLKEM--GEVVAMTGD----GVNDAPALKLAD-IGVAMGITGTE 751 (753)
Q Consensus 707 ~~K~~~v~~l~~~--~~~v~~~GD----g~ND~~~l~~A~-vgiamgi~g~~ 751 (753)
-.|...++.| .. .+.|++||| +.||.+||+.|+ +|+||| ||.+
T Consensus 196 vsKg~al~~l-~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av~-NA~~ 245 (262)
T 2fue_A 196 WDKRYCLDSL-DQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQD 245 (262)
T ss_dssp CSTTHHHHHH-TTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHH
T ss_pred CCHHHHHHHH-HCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEec-CCCH
Confidence 3688888888 22 468999999 999999999999 599999 9875
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0021 Score=62.17 Aligned_cols=95 Identities=19% Similarity=0.187 Sum_probs=67.4
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 705 (753)
+.|++.++++.|++.|+++.++|+.+...+....+.+|+...- ..++.++.+.. ..-.
T Consensus 85 ~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~~~f----d~~~~~~~~~~------------------~KP~ 142 (216)
T 3kbb_A 85 ENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLEKYF----DVMVFGDQVKN------------------GKPD 142 (216)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGC----SEEECGGGSSS------------------CTTS
T ss_pred cCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCCccc----cccccccccCC------------------Cccc
Confidence 5689999999999999999999999999999999999985321 11112211110 0011
Q ss_pred chhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 706 PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 706 p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
|+-=..+++.+.-..+.++||||+.+|+.+=+.||+.
T Consensus 143 p~~~~~a~~~lg~~p~e~l~VgDs~~Di~aA~~aG~~ 179 (216)
T 3kbb_A 143 PEIYLLVLERLNVVPEKVVVFEDSKSGVEAAKSAGIE 179 (216)
T ss_dssp THHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCC
T ss_pred HHHHHHHHHhhCCCccceEEEecCHHHHHHHHHcCCc
Confidence 2222344455544467899999999999999999974
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0029 Score=62.38 Aligned_cols=37 Identities=8% Similarity=0.145 Sum_probs=30.7
Q ss_pred hhHHHHHHHHhCCCeEEEEc---CCChHHHHHHHHHcCCC
Q 004437 629 GVDKAIDDCRGAGIEVMVIT---GDNKSTAEAICRQIKLF 665 (753)
Q Consensus 629 ~~~~~i~~l~~~gi~v~i~T---Gd~~~~a~~ia~~~gi~ 665 (753)
.+.++++.|++.|++++++| |+...........+|+.
T Consensus 23 ~~~~~~~~l~~~g~~~~~~t~~~g~~~~~~~~~~~~~g~~ 62 (250)
T 2c4n_A 23 GAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVD 62 (250)
T ss_dssp THHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHcCCcEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 34889999999999999999 88887777777777764
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0044 Score=62.09 Aligned_cols=99 Identities=15% Similarity=0.108 Sum_probs=67.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.++++.|++ ++++.++|+.+...+..+.+.+|+...- ..++.+++... ..-
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f----~~i~~~~~~~~------------------~KP 177 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYF----DAIVIGGEQKE------------------EKP 177 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGC----SEEEEGGGSSS------------------CTT
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhh----heEEecCCCCC------------------CCC
Confidence 577999999999998 5999999999999888888999985311 11111111100 000
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCC-cccHHHhhhcCc--eEecC
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDG-VNDAPALKLADI--GVAMG 746 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg-~ND~~~l~~A~v--giamg 746 (753)
.|+--..+++.+.-....++||||+ .||+.+-+.||+ .|.++
T Consensus 178 ~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~~~~i~v~ 222 (260)
T 2gfh_A 178 APSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWIN 222 (260)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCSEEEEEC
T ss_pred CHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCCceEEEEc
Confidence 1222233344444345689999995 999999999999 57776
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0017 Score=65.39 Aligned_cols=41 Identities=15% Similarity=0.238 Sum_probs=36.7
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEc---CCChHHHHHHHHHcCCCC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVIT---GDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~T---Gd~~~~a~~ia~~~gi~~ 666 (753)
.+ ++++++|++++++|++++++| |+.........+++|+..
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~ 65 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVET 65 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 45 899999999999999999999 888888888889999854
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.063 Score=50.24 Aligned_cols=54 Identities=17% Similarity=0.242 Sum_probs=35.8
Q ss_pred EEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCCCc
Q 004437 526 QLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPS 605 (753)
Q Consensus 526 ~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~~~ 605 (753)
+.+..|+++.|.+.. .+++++ +...+.++..+|..++.+|.
T Consensus 132 ~~v~iGn~~~m~~~g----------i~i~~~----~~~~~~~~~~~G~T~V~vai------------------------- 172 (185)
T 2kmv_A 132 YKVLIGNREWMIRNG----------LVINND----VNDFMTEHERKGRTAVLVAV------------------------- 172 (185)
T ss_dssp EEEEEECHHHHHHHT----------CCCCHH----HHHHHHHHHHTTCEEEEEEE-------------------------
T ss_pred eEEEECCHHHHHHcC----------CCCCHH----HHHHHHHHHhCCCeEEEEEE-------------------------
Confidence 345669998876532 113322 33445667788998888885
Q ss_pred ccccCCCCeEEEEEccccCC
Q 004437 606 CYSTIESDLVFVGVVGLRDP 625 (753)
Q Consensus 606 ~~~~~e~~l~~lG~i~~~d~ 625 (753)
|.+++|++++.|+
T Consensus 173 -------dg~l~g~iavaD~ 185 (185)
T 2kmv_A 173 -------DDELCGLIAIADT 185 (185)
T ss_dssp -------TTEEEEEEEEECC
T ss_pred -------CCEEEEEEEEEcC
Confidence 3468999999985
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.36 E-value=0.0021 Score=62.75 Aligned_cols=93 Identities=16% Similarity=0.149 Sum_probs=58.0
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.++++.|++. +++.++|+.... .+.+|+...- ..++.++.... ..-
T Consensus 105 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~-----l~~~~l~~~f----~~~~~~~~~~~------------------~kp 156 (230)
T 3vay_A 105 QIFPEVQPTLEILAKT-FTLGVITNGNAD-----VRRLGLADYF----AFALCAEDLGI------------------GKP 156 (230)
T ss_dssp CBCTTHHHHHHHHHTT-SEEEEEESSCCC-----GGGSTTGGGC----SEEEEHHHHTC------------------CTT
T ss_pred ccCcCHHHHHHHHHhC-CeEEEEECCchh-----hhhcCcHHHe----eeeEEccccCC------------------CCc
Confidence 3678999999999998 999999987754 3445543211 01111111000 000
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCc-ccHHHhhhcCceEec
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGV-NDAPALKLADIGVAM 745 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~-ND~~~l~~A~vgiam 745 (753)
.|+--..+++.+.-....+++|||+. ||+.|.+.||+++++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~ 198 (230)
T 3vay_A 157 DPAPFLEALRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIW 198 (230)
T ss_dssp SHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEE
T ss_pred CHHHHHHHHHHhCCCchheEEEeCChHHHHHHHHHCCCEEEE
Confidence 11112333444443457899999998 999999999998877
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=96.30 E-value=0.0075 Score=61.84 Aligned_cols=97 Identities=12% Similarity=-0.030 Sum_probs=65.2
Q ss_pred cccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHH---HHHHHH--------cCCCCCCCccccccccchhhhccCHHHH
Q 004437 621 GLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTA---EAICRQ--------IKLFSGNEDLTGRSFTGKEFMALSSTQQ 689 (753)
Q Consensus 621 ~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a---~~ia~~--------~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (753)
..++++.+++.++++.|+++|+++.++||+....+ ....+. .|+. .. .++.++...
T Consensus 184 ~~~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~~~~~~~~l~~~~~~~~~~~~~~--~~----~~~~~~~~~------- 250 (301)
T 1ltq_A 184 CDTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMTRKWVEDIAGVP--LV----MQCQREQGD------- 250 (301)
T ss_dssp GGGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHHHHHHHHTTCCC--CS----EEEECCTTC-------
T ss_pred ccccCCChHHHHHHHHHHHCCCeEEEEeCCCcccchhHHHHHHhcccccccccCCC--ch----heeeccCCC-------
Confidence 45678899999999999999999999999985432 344444 6772 10 111111000
Q ss_pred HHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCe-EEEEcCCcccHHHhhhcCce
Q 004437 690 IEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEV-VAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 690 ~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~-v~~~GDg~ND~~~l~~A~vg 742 (753)
.+-.|+-+..+++.+...... ++||||..+|+.|-+.|++-
T Consensus 251 ------------~kp~p~~~~~~~~~~~~~~~~~~~~vgD~~~di~~a~~aG~~ 292 (301)
T 1ltq_A 251 ------------TRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGVE 292 (301)
T ss_dssp ------------CSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTCC
T ss_pred ------------CcHHHHHHHHHHHHHhccccceEEEeCCcHHHHHHHHHcCCe
Confidence 011245566666766444434 68999999999999999974
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0036 Score=62.55 Aligned_cols=42 Identities=7% Similarity=0.085 Sum_probs=34.5
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChH---HHHHHHHHcCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKS---TAEAICRQIKLF 665 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~---~a~~ia~~~gi~ 665 (753)
.++.|++.++|+.|+++|+++.++||+... .+....+.+|+.
T Consensus 100 ~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 100 AEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 356799999999999999999999999844 444556777885
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.0055 Score=58.46 Aligned_cols=87 Identities=10% Similarity=0.009 Sum_probs=56.5
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.++++.|+++|+++.++||.....+..++. ..+ ..++.++... +.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~~-~~~--------d~v~~~~~~~--------------------~~ 86 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLAA-PVN--------DWMIAAPRPT--------------------AG 86 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHHT-TTT--------TTCEECCCCS--------------------SC
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhcC-ccC--------CEEEECCcCC--------------------CC
Confidence 567999999999999999999999998877754443 111 0111111000 01
Q ss_pred CchhHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCc
Q 004437 705 EPRHKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~v 741 (753)
.|. ...+.+.+++. .+.++||||..+|+.+=+.|++
T Consensus 87 KP~-p~~~~~a~~~l~~~~~~~~v~VGDs~~Di~aA~~aG~ 126 (196)
T 2oda_A 87 WPQ-PDACWMALMALNVSQLEGCVLISGDPRLLQSGLNAGL 126 (196)
T ss_dssp TTS-THHHHHHHHHTTCSCSTTCEEEESCHHHHHHHHHHTC
T ss_pred CCC-hHHHHHHHHHcCCCCCccEEEEeCCHHHHHHHHHCCC
Confidence 121 12333334333 2579999999999999999996
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=96.27 E-value=0.0031 Score=59.02 Aligned_cols=91 Identities=14% Similarity=0.131 Sum_probs=61.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCC---------------ChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHH
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGD---------------NKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQ 689 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (753)
++.|++.++|+.|+++|++++++|+. ....+..+.+.+|+. +
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----f------------------ 98 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGVQ-----F------------------ 98 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTCC-----E------------------
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCCC-----e------------------
Confidence 57899999999999999999999998 455677788888874 1
Q ss_pred HHHHHhcCCeE-EE-----e----eCc--hhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce-EecC
Q 004437 690 IEALSKHGGKV-FS-----R----AEP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG-VAMG 746 (753)
Q Consensus 690 ~~~~~~~~~~v-~~-----~----~~p--~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg 746 (753)
..+ ++ . ..| +-=..+++.+.-....+++|||+.+|+.+-+.|++. |.+.
T Consensus 99 --------d~v~~s~~~~~~~~~~~KP~p~~~~~~~~~~gi~~~~~l~VGD~~~Di~~A~~aG~~~i~v~ 160 (176)
T 2fpr_A 99 --------DEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYD 160 (176)
T ss_dssp --------EEEEEECCCGGGCCSSSTTSCGGGGGGC----CCGGGCEEEESSHHHHHHHHHHTSEEEECB
T ss_pred --------eEEEEcCCCCcccccccCCCHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHcCCeEEEEc
Confidence 011 11 0 011 111122333333356799999999999999999985 4443
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=96.20 E-value=0.0011 Score=65.93 Aligned_cols=44 Identities=18% Similarity=0.252 Sum_probs=34.5
Q ss_pred hHHHHHHHH-HHcCCeEEEEcC----CcccHHHhhhcCc-eEecCCCCccC
Q 004437 708 HKQEIVRML-KEMGEVVAMTGD----GVNDAPALKLADI-GVAMGITGTEV 752 (753)
Q Consensus 708 ~K~~~v~~l-~~~~~~v~~~GD----g~ND~~~l~~A~v-giamgi~g~~~ 752 (753)
.|...++.+ .-..+.|++||| +.||.+||+.|+. |+||| ||.+.
T Consensus 188 ~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av~-Na~~~ 237 (246)
T 2amy_A 188 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDT 237 (246)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHH
T ss_pred chHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEee-CCCHH
Confidence 688888777 112568999999 9999999999988 99999 98753
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=96.10 E-value=0.0049 Score=63.64 Aligned_cols=125 Identities=17% Similarity=0.100 Sum_probs=73.6
Q ss_pred ccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHc----CCCCCCCcccccc--cc-chhhhccCHH-HHHH--
Q 004437 622 LRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQI----KLFSGNEDLTGRS--FT-GKEFMALSST-QQIE-- 691 (753)
Q Consensus 622 ~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~----gi~~~~~~~~~~~--~~-~~~~~~~~~~-~~~~-- 691 (753)
....+.+++++.++.|+++|++|+|+||-+...++.+|..+ ||... .+.+.. +. +..-...... +..+
T Consensus 140 ~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~~~~ygIp~e--~ViG~~~~~~~~~~~~~~~~~~~~~dg~ 217 (327)
T 4as2_A 140 EPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADPRYGYNAKPE--NVIGVTTLLKNRKTGELTTARKQIAEGK 217 (327)
T ss_dssp CCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCGGGSCCCCGG--GEEEECEEEECTTTCCEECHHHHHHTTC
T ss_pred cccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhcccccCCCHH--HeEeeeeeeecccccccccccccccccc
Confidence 33457899999999999999999999999999999999985 44321 111100 00 0000000000 0000
Q ss_pred --HHHhcCCeEEEee-----CchhHHHHHHHHHHcC-CeEEEEcCC-cccHHHhhh--cCceEecCCC
Q 004437 692 --ALSKHGGKVFSRA-----EPRHKQEIVRMLKEMG-EVVAMTGDG-VNDAPALKL--ADIGVAMGIT 748 (753)
Q Consensus 692 --~~~~~~~~v~~~~-----~p~~K~~~v~~l~~~~-~~v~~~GDg-~ND~~~l~~--A~vgiamgi~ 748 (753)
.....+..+..+. .-+.|...|+...+.| .-++++||+ ..|.+||+. ++.|+.+-+|
T Consensus 218 y~~~~~~~~~~~~~~~~p~~~~~GK~~~I~~~i~~g~~Pi~a~Gns~dgD~~ML~~~~~~~~~~L~in 285 (327)
T 4as2_A 218 YDPKANLDLEVTPYLWTPATWMAGKQAAILTYIDRWKRPILVAGDTPDSDGYMLFNGTAENGVHLWVN 285 (327)
T ss_dssp CCGGGGTTCEEEEEECSSCSSTHHHHHHHHHHTCSSCCCSEEEESCHHHHHHHHHHTSCTTCEEEEEC
T ss_pred ccccccccccccccccccccccCccHHHHHHHHhhCCCCeEEecCCCCCCHHHHhccccCCCeEEEEe
Confidence 0000001122221 2356888887766443 458999999 479999965 5666665544
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.06 E-value=0.0087 Score=63.23 Aligned_cols=106 Identities=17% Similarity=0.190 Sum_probs=66.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.++++.|+++|+++.++|+.+...+..+.+.+|+...-. ...+++++....- .+.... +..+.
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~~Fd--~~~Ivs~ddv~~~-----~~~~~~----~kp~~ 283 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFE--ADFIATASDVLEA-----ENMYPQ----ARPLG 283 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSC--GGGEECHHHHHHH-----HHHSTT----SCCCC
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChHhcC--CCEEEeccccccc-----cccccc----ccCCC
Confidence 578999999999999999999999999999999999999853211 0023333332100 000000 00001
Q ss_pred CchhHHHHHHHHHH-----------------cCCeEEEEcCCcccHHHhhhcCce
Q 004437 705 EPRHKQEIVRMLKE-----------------MGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 705 ~p~~K~~~v~~l~~-----------------~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
.|.- .-+...+++ ....++||||+.+|+.+-+.||+.
T Consensus 284 KP~P-~~~~~a~~~lg~~~~~~~~~~~~~~v~p~e~l~VGDs~~Di~aAk~AG~~ 337 (384)
T 1qyi_A 284 KPNP-FSYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGAT 337 (384)
T ss_dssp TTST-HHHHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHTCE
T ss_pred CCCH-HHHHHHHHHcCCccccccccccccCCCCcCeEEEcCCHHHHHHHHHcCCE
Confidence 1211 111222222 236799999999999999999974
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.48 E-value=0.0083 Score=58.17 Aligned_cols=94 Identities=10% Similarity=0.055 Sum_probs=59.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|+++|+++.++|+... .+..+.+.+|+...-. .++.+++. -...-
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~~~f~----~~~~~~~~------------------~~~Kp 151 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLKKYFD----ALALSYEI------------------KAVKP 151 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCGGGCS----EEC----------------------------
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcHhHee----EEEecccc------------------CCCCC
Confidence 3569999999999999999999999866 4778888888743111 11111100 00111
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcc-cHHHhhhcCceEe
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVN-DAPALKLADIGVA 744 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~N-D~~~l~~A~vgia 744 (753)
.|+--..+++.+ |..-++|||+.+ |+.+-+.||+...
T Consensus 152 ~~~~~~~~~~~~---~~~~~~vgD~~~~Di~~a~~aG~~~i 189 (220)
T 2zg6_A 152 NPKIFGFALAKV---GYPAVHVGDIYELDYIGAKRSYVDPI 189 (220)
T ss_dssp -CCHHHHHHHHH---CSSEEEEESSCCCCCCCSSSCSEEEE
T ss_pred CHHHHHHHHHHc---CCCeEEEcCCchHhHHHHHHCCCeEE
Confidence 122222333333 322299999999 9999999998644
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=95.38 E-value=0.016 Score=57.49 Aligned_cols=98 Identities=11% Similarity=0.107 Sum_probs=66.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.+.++.|++.|+++.+.|+.. .+..+.+.+|+...- ..++++++... ..-
T Consensus 116 ~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~F----d~i~~~~~~~~------------------~KP 171 (250)
T 4gib_A 116 DILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKF----DFIADAGKCKN------------------NKP 171 (250)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGC----SEECCGGGCCS------------------CTT
T ss_pred ccchhHHHHHHHHHhcccccccccccc--hhhhHhhhccccccc----ceeecccccCC------------------CCC
Confidence 467899999999999999999887764 356678888885421 12222222210 011
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc-eEecC
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI-GVAMG 746 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v-giamg 746 (753)
.|+-=..+++.+.-..+.+++|||+.+|+.+-+.||+ .|+++
T Consensus 172 ~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v~ 214 (250)
T 4gib_A 172 HPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGVG 214 (250)
T ss_dssp SSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEES
T ss_pred cHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEEC
Confidence 2333344555555556789999999999999999997 55555
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=95.25 E-value=0.016 Score=57.21 Aligned_cols=93 Identities=14% Similarity=0.070 Sum_probs=62.7
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.+.++.|+++|+++.++|.... +..+.+.+|+...- ..++.+++... ..-
T Consensus 95 ~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~~~f----d~i~~~~~~~~------------------~KP 150 (243)
T 4g9b_A 95 AVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELREFF----TFCADASQLKN------------------SKP 150 (243)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCGGGC----SEECCGGGCSS------------------CTT
T ss_pred cccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhcccc----ccccccccccC------------------CCC
Confidence 4678999999999999999999998654 45667888875321 12222222210 001
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
.|+-=...++.+.-..+.+++|||+.+|+.+=+.||+
T Consensus 151 ~p~~~~~a~~~lg~~p~e~l~VgDs~~di~aA~~aG~ 187 (243)
T 4g9b_A 151 DPEIFLAACAGLGVPPQACIGIEDAQAGIDAINASGM 187 (243)
T ss_dssp STHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCC
Confidence 1222234455555456789999999999999999995
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=95.18 E-value=0.039 Score=55.10 Aligned_cols=94 Identities=15% Similarity=0.165 Sum_probs=63.0
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHc---CCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEE
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQI---KLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~---gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 701 (753)
++.+++.++++.|+++|+++.++|..+...+..+.+.+ |+...- ..++.+ +..
T Consensus 130 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~~~~l~~~f----d~i~~~-~~~------------------- 185 (261)
T 1yns_A 130 EFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELV----DGHFDT-KIG------------------- 185 (261)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGC----SEEECG-GGC-------------------
T ss_pred ccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhhcccChHhhc----cEEEec-CCC-------------------
Confidence 57899999999999999999999999988777776644 353211 111111 110
Q ss_pred EeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 702 SRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 702 ~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
..-.|+-=..+++.+.-....++||||..+|+.+-+.||+-
T Consensus 186 ~KP~p~~~~~~~~~lg~~p~~~l~VgDs~~di~aA~~aG~~ 226 (261)
T 1yns_A 186 HKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVH 226 (261)
T ss_dssp CTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCE
T ss_pred CCCCHHHHHHHHHHhCcCcccEEEEcCCHHHHHHHHHCCCE
Confidence 00011211334444444457899999999999999999974
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=94.97 E-value=0.03 Score=54.61 Aligned_cols=85 Identities=14% Similarity=0.138 Sum_probs=58.8
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.+.++.|+++| ++.++|+.+...+..+.+.+|+...- . ..+...
T Consensus 96 ~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl~~~f-------------------------~---~~~~~~- 145 (231)
T 2p11_A 96 RVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGLWDEV-------------------------E---GRVLIY- 145 (231)
T ss_dssp GBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTHHHHT-------------------------T---TCEEEE-
T ss_pred CcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCcHHhc-------------------------C---eeEEec-
Confidence 57899999999999999 99999999988888889988873200 0 111111
Q ss_pred CchhHHHHHHHHHH--cCCeEEEEcCCcc---cHHHhhhcCc
Q 004437 705 EPRHKQEIVRMLKE--MGEVVAMTGDGVN---DAPALKLADI 741 (753)
Q Consensus 705 ~p~~K~~~v~~l~~--~~~~v~~~GDg~N---D~~~l~~A~v 741 (753)
..|..+++.+.+ ....+++|||+.+ |+.+-+.||+
T Consensus 146 --~~K~~~~~~~~~~~~~~~~~~vgDs~~d~~di~~A~~aG~ 185 (231)
T 2p11_A 146 --IHKELMLDQVMECYPARHYVMVDDKLRILAAMKKAWGARL 185 (231)
T ss_dssp --SSGGGCHHHHHHHSCCSEEEEECSCHHHHHHHHHHHGGGE
T ss_pred --CChHHHHHHHHhcCCCceEEEEcCccchhhhhHHHHHcCC
Confidence 122233333332 3568999999999 5555566775
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=94.42 E-value=0.063 Score=53.13 Aligned_cols=44 Identities=16% Similarity=0.240 Sum_probs=32.2
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEc---CCChHHHHHHHHHcCCCC
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVIT---GDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~T---Gd~~~~a~~ia~~~gi~~ 666 (753)
.+..-+++.++++.+++.|++++++| |+.........+.+|+..
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~ 67 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI 67 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc
Confidence 44555788999999999999999999 555555555666777753
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=94.33 E-value=0.016 Score=55.85 Aligned_cols=88 Identities=18% Similarity=0.280 Sum_probs=53.7
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH----cCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEE
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ----IKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 701 (753)
+.+++.+.++.|+++|+++.++|+.+...+..+.+. .+... .+.. ...+
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~~~~~~l~~l~~~f~~i~----------~~~~-----------------~~~~ 141 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA----------TNMN-----------------PVIF 141 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT----------TTBC-----------------CCEE
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHHHhcCccc----------cccc-----------------hhhh
Confidence 467899999999999999999999975543333222 22210 0000 0011
Q ss_pred EeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 702 SRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 702 ~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
....|. ...+.+.+++.|- ++++||..+|+.+-+.||+-
T Consensus 142 ~~~KP~-p~~~~~~~~~~g~-~l~VGDs~~Di~aA~~aG~~ 180 (211)
T 2b82_A 142 AGDKPG-QNTKSQWLQDKNI-RIFYGDSDNDITAARDVGAR 180 (211)
T ss_dssp CCCCTT-CCCSHHHHHHTTE-EEEEESSHHHHHHHHHTTCE
T ss_pred cCCCCC-HHHHHHHHHHCCC-EEEEECCHHHHHHHHHCCCe
Confidence 111221 1122333444444 99999999999999999974
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=93.92 E-value=0.085 Score=53.95 Aligned_cols=42 Identities=7% Similarity=0.131 Sum_probs=35.1
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEc---CCChHHHHHHHHHcCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVIT---GDNKSTAEAICRQIKLF 665 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~T---Gd~~~~a~~ia~~~gi~ 665 (753)
+.+-+++.+++++|+++|++++++| |+.........+.+|+.
T Consensus 36 ~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 36 ERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 4566789999999999999999999 57777776777788875
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=93.23 E-value=0.092 Score=46.65 Aligned_cols=41 Identities=10% Similarity=-0.048 Sum_probs=34.8
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCC---hHHHHHHHHHcCCCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDN---KSTAEAICRQIKLFS 666 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~---~~~a~~ia~~~gi~~ 666 (753)
+.+++.++|++|+++|++++++|||+ ...+...+++.|+..
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~~ 68 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLEF 68 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCCe
Confidence 34689999999999999999999998 456677788888853
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=92.10 E-value=0.14 Score=50.87 Aligned_cols=43 Identities=7% Similarity=0.281 Sum_probs=34.4
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH----cCCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ----IKLFS 666 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~----~gi~~ 666 (753)
+..-+++.++++.+++.|+++.++||+...+...+++. +|+..
T Consensus 20 ~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~ 66 (264)
T 1yv9_A 20 KEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV 66 (264)
T ss_dssp TEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCC
T ss_pred CEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCC
Confidence 33447899999999999999999999988776666554 77753
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=91.53 E-value=0.061 Score=59.64 Aligned_cols=99 Identities=11% Similarity=0.069 Sum_probs=58.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCC---ChHHHHHHHHH-cCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeE
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGD---NKSTAEAICRQ-IKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKV 700 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd---~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 700 (753)
++.+++.++++.|+++|+++.++|+. .......+... .|+... ...+++++++..-
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~l~~~----fd~i~~~~~~~~~---------------- 159 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMH----FDFLIESCQVGMV---------------- 159 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTT----SSEEEEHHHHTCC----------------
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCCCccccchhhHHHHHhhhhhhh----eeEEEeccccCCC----------------
Confidence 57899999999999999999999996 11111111111 132110 0112222221100
Q ss_pred EEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEec
Q 004437 701 FSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAM 745 (753)
Q Consensus 701 ~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 745 (753)
.-.|+-=..+.+.+.-..+.+++|||+.||+.+-+.|++....
T Consensus 160 --KP~p~~~~~~~~~lg~~p~~~~~v~D~~~di~~a~~aG~~~~~ 202 (555)
T 3i28_A 160 --KPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTIL 202 (555)
T ss_dssp --TTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCEEEE
T ss_pred --CCCHHHHHHHHHHcCCChhHEEEECCcHHHHHHHHHcCCEEEE
Confidence 0012222344444544456899999999999999999986544
|
| >2i7d_A 5'(3')-deoxyribonucleotidase, cytosolic type; hydrolase; HET: DUR; 1.20A {Homo sapiens} PDB: 2jar_A* 2jao_A* | Back alignment and structure |
|---|
Probab=91.34 E-value=0.0089 Score=56.72 Aligned_cols=41 Identities=12% Similarity=0.135 Sum_probs=35.1
Q ss_pred CCCCchhHHHHHHHHhC-CCeEEEEcCCChHHHHHHHHHcCC
Q 004437 624 DPPRGGVDKAIDDCRGA-GIEVMVITGDNKSTAEAICRQIKL 664 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~-gi~v~i~TGd~~~~a~~ia~~~gi 664 (753)
-++.|++.++++.|+++ |+++.++|+.....+..+.+.+|+
T Consensus 72 ~~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~gl 113 (193)
T 2i7d_A 72 LEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRW 113 (193)
T ss_dssp CCBCTTHHHHHHHHHTSTTEEEEEEECCCSSCTTTHHHHHHH
T ss_pred CccCcCHHHHHHHHHhCCCCeEEEEeCCChhhHHHHHHHhCc
Confidence 35789999999999999 999999999988777777776665
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=90.99 E-value=0.06 Score=54.87 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=27.4
Q ss_pred Hhccccccccchhhhhc---------CCeeEEeeCCCcccccCce
Q 004437 341 MAQKNAIVRKLPSVETL---------GCTTVICSDKTGTLTTNQM 376 (753)
Q Consensus 341 l~k~~ilvk~~~~le~l---------g~v~~i~~DKTGTLT~~~~ 376 (753)
+.|.++++|++..+|.+ .+.. ++||||||||+...
T Consensus 16 l~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~ 59 (297)
T 4fe3_A 16 FQKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSY 59 (297)
T ss_dssp GTSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEE
T ss_pred HhcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeecc
Confidence 47889999999999873 2333 67799999998653
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=90.67 E-value=0.31 Score=52.16 Aligned_cols=39 Identities=13% Similarity=0.277 Sum_probs=32.6
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCCh------------HHHHHHHHHcCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNK------------STAEAICRQIKL 664 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~------------~~a~~ia~~~gi 664 (753)
+-+++.++|+.|+++|++++++|+... ..+..+.+.+|+
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~gi~~g~~~~~~~~~~~~~~l~~lgl 138 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQMGIGRGKLPAEVFKGKVEAVLEKLGV 138 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECHHHHTTSSCHHHHHHHHHHHHHHHTS
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCccccCCCCCHHHHHHHHHHHHHHcCC
Confidence 679999999999999999999999651 225677788887
|
| >2g80_A Protein UTR4; YEL038W, UTR4 protein (unknown transcript 4 protein), struct genomics, PSI, protein structure initiative; 2.28A {Saccharomyces cerevisiae} SCOP: c.108.1.22 | Back alignment and structure |
|---|
Probab=89.19 E-value=0.49 Score=46.72 Aligned_cols=89 Identities=15% Similarity=0.075 Sum_probs=57.6
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHc--C---------CCCCCCccccccccchhhhccCHHHHHHHH
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQI--K---------LFSGNEDLTGRSFTGKEFMALSSTQQIEAL 693 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~--g---------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (753)
++.+++.++++. |+++.++|..+...+..+.+.+ | +...-. ..+..
T Consensus 125 ~~~pgv~e~L~~----g~~l~i~Tn~~~~~~~~~l~~~~~g~~~~~~~l~l~~~~~----~~f~~--------------- 181 (253)
T 2g80_A 125 PVYADAIDFIKR----KKRVFIYSSGSVKAQKLLFGYVQDPNAPAHDSLDLNSYID----GYFDI--------------- 181 (253)
T ss_dssp CCCHHHHHHHHH----CSCEEEECSSCHHHHHHHHHSBCCTTCTTSCCBCCGGGCC----EEECH---------------
T ss_pred CCCCCHHHHHHc----CCEEEEEeCCCHHHHHHHHHhhcccccccccccchHhhcc----eEEee---------------
Confidence 567899988888 9999999999998888877766 4 211000 00000
Q ss_pred HhcCCeEEEeeCc--hhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 694 SKHGGKVFSRAEP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 694 ~~~~~~v~~~~~p--~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
+.+...| +-=..+++.+.-....+++|||..+|+.+=+.||+-
T Consensus 182 ------~~~g~KP~p~~~~~a~~~lg~~p~~~l~vgDs~~di~aA~~aG~~ 226 (253)
T 2g80_A 182 ------NTSGKKTETQSYANILRDIGAKASEVLFLSDNPLELDAAAGVGIA 226 (253)
T ss_dssp ------HHHCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCE
T ss_pred ------eccCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCE
Confidence 0001122 222334444544456899999999999999999974
|
| >2arf_A Wilson disease ATPase; P-type ATPase,ATP7B, copper transport, nucleotide binding, ATP binding, hydrolase; NMR {Homo sapiens} PDB: 2koy_A | Back alignment and structure |
|---|
Probab=88.88 E-value=11 Score=33.94 Aligned_cols=17 Identities=12% Similarity=0.169 Sum_probs=14.1
Q ss_pred ecCCchHHHHHHHHHHc
Q 004437 444 ATGLPTEAALKVLVEKM 460 (753)
Q Consensus 444 ~~~~p~e~al~~~~~~~ 460 (753)
.+.||...|++.++++.
T Consensus 35 ~SeHPlA~AIv~~a~~~ 51 (165)
T 2arf_A 35 SSEHPLGVAVTKYCKEE 51 (165)
T ss_dssp TSCSTTHHHHHHHHHHH
T ss_pred cCCChHHHHHHHHHHHh
Confidence 45699999999998765
|
| >1q92_A 5(3)-deoxyribonucleotidase; alpha-beta rossman fold, hydrolase; HET: DRM; 1.40A {Homo sapiens} SCOP: c.108.1.8 PDB: 1mh9_A* 1q91_A* 1z4m_A* 1z4i_A* 1z4j_A* 1z4l_A* 1z4k_A* 1z4p_X* 1z4q_A* 2jau_A* 2jaw_A* 3u19_A* 3u13_A 4e88_A | Back alignment and structure |
|---|
Probab=85.70 E-value=0.014 Score=55.61 Aligned_cols=40 Identities=15% Similarity=0.149 Sum_probs=33.9
Q ss_pred CCCchhHHHHHHHHhC-CCeEEEEcCCChHHHHHHHHHcCC
Q 004437 625 PPRGGVDKAIDDCRGA-GIEVMVITGDNKSTAEAICRQIKL 664 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~-gi~v~i~TGd~~~~a~~ia~~~gi 664 (753)
++.+++.+.++.|++. |+++.++|+.....+..+.+.+|+
T Consensus 75 ~~~~g~~e~L~~L~~~~g~~~~ivT~~~~~~~~~~l~~~~l 115 (197)
T 1q92_A 75 EPLPGAVEAVKEMASLQNTDVFICTSPIKMFKYCPYEKYAW 115 (197)
T ss_dssp CBCTTHHHHHHHHHHSTTEEEEEEECCCSCCSSHHHHHHHH
T ss_pred CcCcCHHHHHHHHHhcCCCeEEEEeCCccchHHHHHHHhch
Confidence 5779999999999999 999999999987766666666655
|
| >2hhl_A CTD small phosphatase-like protein; CTD phosphatase, keggins anion, structural genomics, PSI, protein structure initiative; HET: KEG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=85.13 E-value=0.14 Score=48.38 Aligned_cols=90 Identities=12% Similarity=0.067 Sum_probs=63.4
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+||++.+.++.|.+. +++++.|.-....|..+.+.+++... ....+.++..
T Consensus 68 ~~RPgv~efL~~l~~~-~~i~I~Tss~~~~a~~vl~~ld~~~~----f~~~l~rd~~----------------------- 119 (195)
T 2hhl_A 68 LKRPHVDEFLQRMGQL-FECVLFTASLAKYADPVADLLDRWGV----FRARLFRESC----------------------- 119 (195)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCCSSC----EEEEECGGGC-----------------------
T ss_pred EeCcCHHHHHHHHHcC-CeEEEEcCCCHHHHHHHHHHhCCccc----EEEEEEcccc-----------------------
Confidence 5799999999999998 99999999999999999999988531 1112222211
Q ss_pred CchhHHHHHHHHHH---cCCeEEEEcCCcccHHHhhhcCceE
Q 004437 705 EPRHKQEIVRMLKE---MGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 705 ~p~~K~~~v~~l~~---~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
...|...++.+.. .-..|++|+|..++..+=..|++-|
T Consensus 120 -~~~k~~~lK~L~~Lg~~~~~~vivDDs~~~~~~~~~ngi~i 160 (195)
T 2hhl_A 120 -VFHRGNYVKDLSRLGRELSKVIIVDNSPASYIFHPENAVPV 160 (195)
T ss_dssp -EEETTEEECCGGGSSSCGGGEEEEESCGGGGTTCGGGEEEC
T ss_pred -eecCCceeeeHhHhCCChhHEEEEECCHHHhhhCccCccEE
Confidence 1112222333333 3457999999999998767776655
|
| >2ght_A Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1; protein-peptide complex, HAD superfamily, hydrolase; HET: SEP; 1.80A {Homo sapiens} PDB: 2ghq_A* 3pgl_A* 1t9z_A* 1ta0_A* 3l0c_A 3l0y_A 3l0b_A* 2q5e_A | Back alignment and structure |
|---|
Probab=83.72 E-value=0.19 Score=46.88 Aligned_cols=90 Identities=12% Similarity=0.067 Sum_probs=62.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+||++.+.++.+.+. +++++.|.-....|..+.+.++... . ....+.++..
T Consensus 55 ~~rPg~~efL~~l~~~-~~i~I~T~~~~~~a~~vl~~ld~~~---~-f~~~~~rd~~----------------------- 106 (181)
T 2ght_A 55 LKRPHVDEFLQRMGEL-FECVLFTASLAKYADPVADLLDKWG---A-FRARLFRESC----------------------- 106 (181)
T ss_dssp EECTTHHHHHHHHHHH-SEEEEECSSCHHHHHHHHHHHCTTC---C-EEEEECGGGS-----------------------
T ss_pred EeCCCHHHHHHHHHhC-CCEEEEcCCCHHHHHHHHHHHCCCC---c-EEEEEeccCc-----------------------
Confidence 4799999999999998 9999999999999999999998753 1 1111222111
Q ss_pred CchhHHHHHHHHHH---cCCeEEEEcCCcccHHHhhhcCceE
Q 004437 705 EPRHKQEIVRMLKE---MGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 705 ~p~~K~~~v~~l~~---~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
...|...++.+.. .-..|+++||..++..+=..+++-|
T Consensus 107 -~~~k~~~~k~L~~Lg~~~~~~vivdDs~~~~~~~~~ngi~i 147 (181)
T 2ght_A 107 -VFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 147 (181)
T ss_dssp -EEETTEEECCGGGTCSCGGGEEEECSCGGGGTTCTTSBCCC
T ss_pred -eecCCcEeccHHHhCCCcceEEEEeCCHHHhccCcCCEeEe
Confidence 1112222233333 3457999999999998766666654
|
| >1xpj_A Hypothetical protein; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics, UN function; HET: TLA; 2.30A {Vibrio cholerae} SCOP: c.108.1.18 | Back alignment and structure |
|---|
Probab=81.04 E-value=1.9 Score=37.25 Aligned_cols=30 Identities=27% Similarity=0.379 Sum_probs=26.8
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHH
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKST 654 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~ 654 (753)
.+.+++.+++++|+++|++++++||+....
T Consensus 24 ~~~~~~~~~l~~l~~~Gi~~~iaTGR~~~~ 53 (126)
T 1xpj_A 24 LPRLDVIEQLREYHQLGFEIVISTARNMRT 53 (126)
T ss_dssp CBCHHHHHHHHHHHHTTCEEEEEECTTTTT
T ss_pred CCCHHHHHHHHHHHhCCCeEEEEeCCChhh
Confidence 467899999999999999999999998643
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 753 | ||||
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 8e-40 | |
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 6e-35 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 7e-34 | |
| d1wpga4 | 472 | f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATP | 2e-23 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 4e-32 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 1e-28 | |
| d1wpga1 | 115 | b.82.7.1 (A:125-239) Calcium ATPase, transduction | 5e-26 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 1e-14 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 9e-10 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 1e-05 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 5e-05 | |
| d2bdua1 | 291 | c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III | 0.002 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 0.003 |
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 144 bits (364), Expect = 8e-40
Identities = 72/264 (27%), Positives = 112/264 (42%), Gaps = 42/264 (15%)
Query: 376 MSVTEFFTLGR---KTTISRIFHVEGTTYDPK-----DGGIVDWPCYNMDANLQAMAKIC 427
MSV + F + + F + G+TY P+ + + L +A IC
Sbjct: 1 MSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSG---QFDGLVELATIC 57
Query: 428 AVCNDAGVYC--DGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSS 485
A+CND+ + ++ G TE AL LVEKM + + RN +
Sbjct: 58 ALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERA--------- 108
Query: 486 TVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTG-----HNQLLVKGSVESLLERS 540
C + K+ TLEF R RKSMSV N++ VKG+ E +++R
Sbjct: 109 ---NACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRC 165
Query: 541 SHVQLADGSVVPLDEPCWQLMLS--RHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAH 598
++V++ + VP+ P + +LS + LRCL +A +D +
Sbjct: 166 NYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRD---------TPPKREE 215
Query: 599 KKLLDPSCYSTIESDLVFVGVVGL 622
L D S + E+DL FVGVVG+
Sbjct: 216 MVLDDSSRFMEYETDLTFVGVVGM 239
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 134 bits (339), Expect = 6e-35
Identities = 41/415 (9%), Positives = 90/415 (21%), Gaps = 99/415 (23%)
Query: 347 IVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDG 406
+ L LG + I + + F + K
Sbjct: 26 VYELLMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQK-------------DKILNKLKSL 72
Query: 407 GI-VDWPCYNMDANLQAMAKICAVCNDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDV 465
G+ +W M I + + A E +
Sbjct: 73 GLNSNW----------DMLFIVFSIHLIDILK------KLSHDEIEAFMYQDEPVE---- 112
Query: 466 KGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHN 525
+ ++ N L + + +
Sbjct: 113 -----LKLQNISTNLA-------------------DCFNLNEQLPLQFLDNVKVGKNNIY 148
Query: 526 QLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELG 585
L + + + + + + ++ + + + K
Sbjct: 149 AALEEFATT---------------ELHVSDATLFSLKGALWTLAQEVYQEWYLGSKL--- 190
Query: 586 EFSDYYSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVM 645
Y + + + Y E L V ++D +GAG E+
Sbjct: 191 -----YEDVEKKIARTTFKTGYIYQEIILRP----------VDEVKVLLNDLKGAGFELG 235
Query: 646 VITGDNKSTAEAICRQ---IKLFSGNEDLTGRSFTGKEFMALSSTQQI--EALSKHGGKV 700
+ TG + + F + T E M + S
Sbjct: 236 IATGRPYTETVVPFENLGLLPYFEADFIATASDVLEAENMYPQARPLGKPNPFSYIAALY 295
Query: 701 FSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLAD---IGVAMGITGTEV 752
+ + + + V + GD + D + + IG G+ G +
Sbjct: 296 GNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKGKDA 350
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 133 bits (336), Expect = 7e-34
Identities = 67/140 (47%), Positives = 93/140 (66%), Gaps = 7/140 (5%)
Query: 1 MEEKPFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQ 60
ME A S + E+CL + V GL+ +V++ E+YG NEL E+GK LW+LV+EQ
Sbjct: 1 MEA----AHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQ 56
Query: 61 FDDTLVKILLVAAFISFILAYFHSSDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAE 120
F+D LV+ILL+AA ISF+LA+F G+ +VEP VI+LIL+ NAIVGVWQE NAE
Sbjct: 57 FEDLLVRILLLAACISFVLAWFE---EGEETITAFVEPFVILLILIANAIVGVWQERNAE 113
Query: 121 KALEALKKIQCESGKVLRDG 140
A+EALK+ + + + +
Sbjct: 114 NAIEALKEYEPAATEQDKTP 133
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 472 | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 102 bits (254), Expect = 2e-23
Identities = 73/171 (42%), Positives = 96/171 (56%), Gaps = 20/171 (11%)
Query: 226 VCIVINTGMNTEIGKIQKQIHDASLEESD-----------TPLRKKLDEFGNRLTTAIGL 274
I++ N +G Q++ + ++E TPL++KLDEFG +L+ I L
Sbjct: 92 FVILLILIANAIVGVWQERNAENAIEALKEYEPAATEQDKTPLQQKLDEFGEQLSKVISL 151
Query: 275 VCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPEGLPAVITTCL 334
+C+ VW++N +F W YYFKIAVALAVAAIPEGLPAVITTCL
Sbjct: 152 ICVAVWLINIGHFNDPVHGGSW-------IRGAIYYFKIAVALAVAAIPEGLPAVITTCL 204
Query: 335 ALGTRKMAQKNAIVRKLPSVETLGCTTVICSDK--TGTLTTNQMSVTEFFT 383
ALGTR+MA+KNAIVR LPSVETLG + +++N V F
Sbjct: 205 ALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEVVCIFL 255
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 121 bits (305), Expect = 4e-32
Identities = 46/259 (17%), Positives = 78/259 (30%), Gaps = 56/259 (21%)
Query: 376 MSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGV 435
M+V + + E T + + G D A+++I +CN A
Sbjct: 2 MTVAHMWFDNQ--------IHEADTTEDQSGATFD----KRSPTWTALSRIAGLCNRAVF 49
Query: 436 YCDG-----PLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLG 490
G +E+AL +E G
Sbjct: 50 KAGQENISVSKRDTAGDASESALLKCIELSC----------------------------G 81
Query: 491 CCEWWTKRSKRVATLEFDRIRKSMSVIVREPTGHNQL--LVKGSVESLLERSSHVQLADG 548
R+ +VA + F+ K I ++KG+ E +L+R S + L G
Sbjct: 82 SVRKMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSI-LVQG 140
Query: 549 SVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLDPSCYS 608
+PLD+ + +LE+ G R LG + D +
Sbjct: 141 KEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLN--------LPSGKFPRGFKFDTDELN 192
Query: 609 TIESDLVFVGVVGLRDPPR 627
L FVG++ + D
Sbjct: 193 FPTEKLCFVGLMSMIDHHH 211
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 110 bits (276), Expect = 1e-28
Identities = 71/147 (48%), Positives = 90/147 (61%), Gaps = 3/147 (2%)
Query: 606 CYSTIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLF 665
C S I SD DPPR V +I CR AGI V++ITGDNK TA AICR+I +F
Sbjct: 1 CTSVICSDKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIF 60
Query: 666 SGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAM 725
NE++ R++TG+EF + + F+R EP HK +IV L+ E+ AM
Sbjct: 61 GENEEVADRAYTGREFD--DLPLAEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAM 118
Query: 726 TGDGVNDAPALKLADIGVAMGITGTEV 752
TGDGVNDAPALK A+IG+AMG +GT V
Sbjct: 119 TGDGVNDAPALKKAEIGIAMG-SGTAV 144
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 115 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 100 bits (251), Expect = 5e-26
Identities = 56/115 (48%), Positives = 80/115 (69%), Gaps = 1/115 (0%)
Query: 132 ESGKVLRDG-YLVPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEA 190
E GKV R V + A +VPGDIVE+ VGDKVPAD+R+ ++K+++LRV+QS LTGE+
Sbjct: 1 EMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGES 60
Query: 191 MPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQI 245
+ ++K T PV Q K+NM+F+GT + G + IV TG++TEIGKI+ Q+
Sbjct: 61 VSVIKHTEPVPDPRAVNQDKKNMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 69.4 bits (169), Expect = 1e-14
Identities = 43/145 (29%), Positives = 65/145 (44%), Gaps = 35/145 (24%)
Query: 608 STIESDLVFVGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSG 667
+ + D G D + A+ + + GI+V +ITGDN +AEAI R++
Sbjct: 4 TAVIFDKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISREL----- 58
Query: 668 NEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTG 727
+ V + P K E V+ L+ EVVA G
Sbjct: 59 ----------------------------NLDLVIAEVLPHQKSEEVKKLQA-KEVVAFVG 89
Query: 728 DGVNDAPALKLADIGVAMGITGTEV 752
DG+NDAPAL AD+G+A+G +G++V
Sbjct: 90 DGINDAPALAQADLGIAVG-SGSDV 113
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 57.3 bits (137), Expect = 9e-10
Identities = 22/130 (16%), Positives = 34/130 (26%), Gaps = 9/130 (6%)
Query: 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFM 682
R G + + I VI+G + I
Sbjct: 73 DAKIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKD---------RIYCNHA 123
Query: 683 ALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742
+ + S K ++ L E + + M GD V D A KL+D+
Sbjct: 124 SFDNDYIHIDWPHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLC 183
Query: 743 VAMGITGTEV 752
A E
Sbjct: 184 FARDYLLNEC 193
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.5 bits (104), Expect = 1e-05
Identities = 19/113 (16%), Positives = 37/113 (32%), Gaps = 10/113 (8%)
Query: 634 IDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEAL 693
+ + ++V +I+G +S E + ++ T L E
Sbjct: 91 VSRLQERNVQVFLISGGFRSIVEHVASKL----------NIPATNVFANRLKFYFNGEYA 140
Query: 694 SKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746
+ + + + K + K + + M GDG D A AD + G
Sbjct: 141 GFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFG 193
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 42.9 bits (100), Expect = 5e-05
Identities = 11/41 (26%), Positives = 15/41 (36%)
Query: 706 PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746
K++ V K + V GD ND L A G+
Sbjct: 131 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH 171
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} Length = 291 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Score = 38.8 bits (90), Expect = 0.002
Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 10/118 (8%)
Query: 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRS--FTGKEFM 682
+ G + + GI V + + E + RQ ++ N + F +
Sbjct: 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVL 194
Query: 683 ALSSTQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLAD 740
+ I +KH G + + LK+ ++ + GD D
Sbjct: 195 KGFKGELIHVFNKHDGAL-------KNTDYFSQLKDNSNIILL-GDSQGDLRMADGVA 244
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 38.0 bits (87), Expect = 0.003
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 709 KQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746
K+ ++ + E A+ GD +ND L+ A GVAMG
Sbjct: 219 KRLAKQLNIPLEETAAV-GDSLNDKSMLEAAGKGVAMG 255
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 753 | |||
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.96 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.95 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.95 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.94 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.92 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.88 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.88 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.03 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.0 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.98 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 98.97 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 98.96 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.87 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.86 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 98.85 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.84 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.83 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.74 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.68 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.66 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.57 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.55 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.24 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.11 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.08 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.7 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 97.27 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.25 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.04 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 96.91 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.87 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 96.84 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 96.62 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 96.45 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.4 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.4 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.33 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 96.11 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 95.97 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 95.73 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 95.42 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 95.42 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.41 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.02 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 94.97 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 94.79 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 93.85 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 92.97 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 92.88 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 91.92 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 91.47 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 91.41 | |
| d1zd3a1 | 225 | Epoxide hydrolase, N-terminal domain {Human (Homo | 91.41 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 86.03 | |
| d2b0ca1 | 197 | Putative phosphatase YihX {Escherichia coli [TaxId | 84.22 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 82.99 |
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.96 E-value=1.2e-29 Score=278.36 Aligned_cols=250 Identities=52% Similarity=0.819 Sum_probs=198.2
Q ss_pred CcccccCCHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccCCCCCccHHHHHHHHhhhhHHHHHHHHHHHHHHHhhccC
Q 004437 5 PFPAWSWTVEQCLKEYNVKLDKGLSSREVEKRRERYGWNELDKEKGKPLWQLVLEQFDDTLVKILLVAAFISFILAYFHS 84 (753)
Q Consensus 5 ~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~yG~N~i~~~~~~~~~~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~ 84 (753)
|.+||+.++||++++|+||+++|||++|+++|+++||+|+++.++++++|+.++++|++++.++++++++++++++.+..
T Consensus 1 m~~~h~~~~e~v~~~l~td~~~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~ 80 (472)
T d1wpga4 1 MEAAHSKSTEECLAYFGVSETTGLTPDQVKRHLEKYGHNELPAEEGKSLWELVIEQFEDLLVRILLLAACISFVLAWFEE 80 (472)
T ss_dssp CTTGGGSCHHHHHHHHTCCTTTCBCHHHHHHHHHHSCCSSCCCCCCCCHHHHHHHHTCSHHHHHHHHHHHHHHHHHHTSC
T ss_pred CcChhhCCHHHHHHHhCcCcccCcCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999987654
Q ss_pred CCCCCCCcccchhhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHhhcccccEEEeCCeeeeeecCCCCCCCcEEEecCCCc
Q 004437 85 SDSGDSGFEDYVEPLVIVLILVLNAIVGVWQESNAEKALEALKKIQCESGKVLRDGYLVPDLPAIGLVPGDIVELGVGDK 164 (753)
Q Consensus 85 ~~~~~~~~~~~~~~~~i~~~~~i~~~~~~~~e~~~~~~~~~l~~~~~~~~~V~R~g~~~~~i~~~~Lv~GDII~l~~G~~ 164 (753)
. ......|+++++++++++++..++++||+|+++.++.++++.+.. ..||+
T Consensus 81 ~---~~~~~~~~~~~~I~~vv~~n~~i~~~qe~~a~~~~~~l~~~~~~~--------------------------~~~~~ 131 (472)
T d1wpga4 81 G---EETITAFVEPFVILLILIANAIVGVWQERNAENAIEALKEYEPAA--------------------------TEQDK 131 (472)
T ss_dssp T---TSTTSSSHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHGGGSCCC--------------------------CCCCC
T ss_pred c---cccchhHhHhhhhhheeeeeeeEEeEEechHHHHHHHHhhhcccc--------------------------ccccC
Confidence 2 233457899999999999999999999999999999988764332 13455
Q ss_pred ccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccccEEEeecEEEeeeEEEEEEEEccchhHHHHHHH
Q 004437 165 VPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQ 244 (753)
Q Consensus 165 iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~ 244 (753)
+|+|.+
T Consensus 132 ~P~d~~-------------------------------------------------------------------------- 137 (472)
T d1wpga4 132 TPLQQK-------------------------------------------------------------------------- 137 (472)
T ss_dssp CHHHHH--------------------------------------------------------------------------
T ss_pred chHHHH--------------------------------------------------------------------------
Confidence 555543
Q ss_pred HhhhccCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCcccccchhhHHHHHHHHHHHHHHhccC
Q 004437 245 IHDASLEESDTPLRKKLDEFGNRLTTAIGLVCLVVWIMNYRNFLSWDVVDGWPANVQFSFEKCTYYFKIAVALAVAAIPE 324 (753)
Q Consensus 245 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~llv~~iP~ 324 (753)
+++....+.....+++...+....+.+........| ...+...+..+++++++++|+
T Consensus 138 ----------------l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ai~l~V~~iPE 194 (472)
T d1wpga4 138 ----------------LDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSW-------IRGAIYYFKIAVALAVAAIPE 194 (472)
T ss_dssp ----------------HHHHHHHHHHHHHHHHHHHHHHCCTTSSSCCSSSCS-------SSCGGGHHHHHHHHHHHHSCT
T ss_pred ----------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-------HHHHHHHHHHHHHHHHHhChh
Confidence 333333333333333333333322222111111222 223345677889999999999
Q ss_pred ChhHHHHHHHHHHHHHHhccccccccchhhhhcCCeeEEeeCCC--cccccCceEEEE
Q 004437 325 GLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKT--GTLTTNQMSVTE 380 (753)
Q Consensus 325 ~L~~~~~~~~~~~~~~l~k~~ilvk~~~~le~lg~v~~i~~DKT--GTLT~~~~~v~~ 380 (753)
+||++++++++++++||+|+|++||+++++|++|+..+.|+||| +|||.|.+.+..
T Consensus 195 gLp~~vti~La~~~~rmak~~~lVr~L~avE~~g~~~~~~~~k~i~~~l~~n~~~v~~ 252 (472)
T d1wpga4 195 GLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGRAIYNNMKQFIRYLISSNVGEVVC 252 (472)
T ss_dssp THHHHHHHHHHHHHHHHHTTTEEESCTTHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHhHHhhhhhhhhhHHHHHH
Confidence 99999999999999999999999999999999999999999998 999999876543
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.95 E-value=4.3e-28 Score=236.62 Aligned_cols=204 Identities=22% Similarity=0.279 Sum_probs=146.4
Q ss_pred eEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCCCCccHHHHHHHHHHhhccCCeeecCCC-----cceecCCchH
Q 004437 376 MSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVCNDAGVYCDGP-----LFRATGLPTE 450 (753)
Q Consensus 376 ~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~-----~~~~~~~p~e 450 (753)
|+|+++|..++.+.. ....+.+. .. ....++.+..++.++++||++.+..+.. .+...|+|+|
T Consensus 2 MTV~~~w~~~~~~~~------~~~~~~~~-~~-----~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE 69 (214)
T d1q3ia_ 2 MTVAHMWFDNQIHEA------DTTEDQSG-AT-----FDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASE 69 (214)
T ss_dssp CEEEEEEETTEEEEC------CCC-------C-----CCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHH
T ss_pred eEEEEEEECCEEEEc------CCCCcCCC-cc-----cccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHH
Confidence 899999987754321 11111110 00 0123566788999999999988765432 2456899999
Q ss_pred HHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEEecCC--CeEEEE
Q 004437 451 AALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPT--GHNQLL 528 (753)
Q Consensus 451 ~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~--~~~~~~ 528 (753)
.||+.++.+.|...... +..++++.++||+|.||+|+++++.+. +.+++|
T Consensus 70 ~ALl~~a~~~~~~~~~~----------------------------r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~ 121 (214)
T d1q3ia_ 70 SALLKCIELSCGSVRKM----------------------------RDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLV 121 (214)
T ss_dssp HHHHHHHHHHHSCHHHH----------------------------HHTSCEEEEEC------CEEEEEECSSCTTSEEEE
T ss_pred HHHHHHHHHhCCCHHHH----------------------------HhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEE
Confidence 99999998877653221 567889999999999999999998653 568899
Q ss_pred EcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEeccccc-cccccccCcccccccCCCccc
Q 004437 529 VKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGE-FSDYYSESHPAHKKLLDPSCY 607 (753)
Q Consensus 529 ~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~-~~~~~~~~~~~~~~~~~~~~~ 607 (753)
+|||||.|+++|+.+.. +|...|++++.++.+.+.+++|+++|+|||++|||..+.+ +..+.. .+....
T Consensus 122 ~KGApe~Il~~C~~~~~-~g~~~~l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~---------~~~~~~ 191 (214)
T d1q3ia_ 122 MKGAPERILDRCSSILV-QGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFK---------FDTDEL 191 (214)
T ss_dssp EEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCC---------CCTTTT
T ss_pred ecCCHHHHHHhhhheee-CCceeechHHHHHHHHHHHHHHhhCCcEEEEEEEEecCccccccccc---------cChhhh
Confidence 99999999999998875 7899999999999999999999999999999999985432 221111 112234
Q ss_pred ccCCCCeEEEEEccccCCCCch
Q 004437 608 STIESDLVFVGVVGLRDPPRGG 629 (753)
Q Consensus 608 ~~~e~~l~~lG~i~~~d~~r~~ 629 (753)
...++||+|+|+++++||||+.
T Consensus 192 ~~~e~~L~flGlvgi~DPPR~~ 213 (214)
T d1q3ia_ 192 NFPTEKLCFVGLMSMIDHHHHH 213 (214)
T ss_dssp SSCCSSEEEEEEEEEESCCSCC
T ss_pred hhhcCCCEEEEEEEEEeCCCCC
Confidence 5668999999999999999974
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.95 E-value=5.4e-28 Score=206.98 Aligned_cols=113 Identities=49% Similarity=0.745 Sum_probs=101.5
Q ss_pred ccEEEeCCee-eeeecCCCCCCCcEEEecCCCcccccEEEEEeeCCcEEEEcccccCCCCccccCCCCCcCCcccccccc
Q 004437 133 SGKVLRDGYL-VPDLPAIGLVPGDIVELGVGDKVPADMRVAALKTSSLRVEQSSLTGEAMPILKGTSPVFLDDCELQAKE 211 (753)
Q Consensus 133 ~~~V~R~g~~-~~~i~~~~Lv~GDII~l~~G~~iPaD~~vl~~~s~~~~Vdes~ltGEs~pv~K~~~~~~~~~~~~~~~~ 211 (753)
.++|+|+|++ +++|++++|||||||.|++||+|||||+|+...++++.||||+|||||.|+.|.+.+....+....+..
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~~~~l~vdes~lTGEs~pv~K~~~~~~~~~~~~~~~~ 81 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIKSTTLRVDQSILTGESVSVIKHTEPVPDPRAVNQDKK 81 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEECSSCCEEECHHHHSCCSCEECCCSCCCCTTCCGGGCT
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEeeccceEEEEeecccceEEEEeeccccccccccccccc
Confidence 4689999986 356999999999999999999999999999877788999999999999999998766655555566778
Q ss_pred cEEEeecEEEeeeEEEEEEEEccchhHHHHHHHH
Q 004437 212 NMVFAGTTVVNGSCVCIVINTGMNTEIGKIQKQI 245 (753)
Q Consensus 212 ~~l~~Gt~v~~g~~~~~V~~tG~~t~~g~~~~~~ 245 (753)
|++|+||.+.+|+++++|++||.+|.+|++.+++
T Consensus 82 n~lf~GT~V~~G~~~~~V~~tG~~T~~G~i~~~i 115 (115)
T d1wpga1 82 NMLFSGTNIAAGKALGIVATTGVSTEIGKIRDQM 115 (115)
T ss_dssp TEECTTCEEEECEEEEEEEECGGGSHHHHHHHHH
T ss_pred ceEEeccEEEeeeEEEEEEEEccccHHHHHHHhC
Confidence 9999999999999999999999999999998753
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.94 E-value=2e-27 Score=220.36 Aligned_cols=126 Identities=56% Similarity=0.884 Sum_probs=120.7
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
||+|++++++|+.|+++||+|+|+|||+..+|+.+|+++||......+....++|.++......+..+...+ ..+|+|
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~--~~v~ar 96 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRR--ACCFAR 96 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTTTEEEHHHHHHSCHHHHHHHHHH--CCEEES
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCccccccccccccccchhhHHHHhhhhhh--hhhhhc
Confidence 999999999999999999999999999999999999999999888888888899999999999999888888 689999
Q ss_pred eCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccC
Q 004437 704 AEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 704 ~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~ 752 (753)
++|++|..+++.||+.|+.|+|+|||.||++||++|||||||| +|+++
T Consensus 97 ~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~~-~gt~~ 144 (168)
T d1wpga2 97 VEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAV 144 (168)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEET-TSCHH
T ss_pred cchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEec-cccHH
Confidence 9999999999999999999999999999999999999999999 88765
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.92 E-value=6.9e-25 Score=217.75 Aligned_cols=224 Identities=33% Similarity=0.486 Sum_probs=160.1
Q ss_pred eEEEEEEEcCcccc---eeeeeeecCcccCCCCCCcccCCC---CCccHHHHHHHHHHhhccCCeeecC--CCcceecCC
Q 004437 376 MSVTEFFTLGRKTT---ISRIFHVEGTTYDPKDGGIVDWPC---YNMDANLQAMAKICAVCNDAGVYCD--GPLFRATGL 447 (753)
Q Consensus 376 ~~v~~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~c~~~~~~~~--~~~~~~~~~ 447 (753)
|+|.+++..+...+ ....+.+.+..|.|. |.+..... ....+.++.++.++++||++.+..+ +..+...|+
T Consensus 1 MtV~~m~v~~~~~~~~~~~~~~~VtG~~y~p~-G~i~~~~~~v~~~~~~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~ 79 (239)
T d1wpga3 1 MSVCKMFIIDKVDGDFCSLNEFSITGSTYAPE-GEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGE 79 (239)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEEECCSSSSSC-CCEEETTEECCGGGCHHHHHHHHHHHHSCSCEEEEETTTTEEEEESC
T ss_pred CeeEEEEEEeeecCCcccceEEEEEeEeeCCc-eEEEECCcCcCccccHHHHHHHHHHHhcCCCEeeecCCCCeEEEcCC
Confidence 55666665443211 224566778888885 44432211 2234668899999999999987653 456788899
Q ss_pred chHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEEecCCC----
Q 004437 448 PTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTG---- 523 (753)
Q Consensus 448 p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~---- 523 (753)
|+|.||+.++.+.|+.............. .......+..++++.++||+|.||||+++++.+++
T Consensus 80 pTE~ALl~~a~k~g~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~v~~~pF~S~rK~Msvv~~~~~~~~~~ 147 (239)
T d1wpga3 80 ATETALTTLVEKMNVFNTEVRNLSKVERA------------NACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAA 147 (239)
T ss_dssp HHHHHHHHHHHHHCTTCCCCSSSCHHHHT------------THHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSGGGGG
T ss_pred CCcHHHHHHHHHhCCChHHhhccchhhhh------------ccchhhhhhhCeEEEEeeecccccEEEEEEEcCCCCccc
Confidence 99999999999999876554321100000 00111125678899999999999999999997664
Q ss_pred -eEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHh--hhccceEEEEEEeccccccccccccCcccccc
Q 004437 524 -HNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEM--SSKGLRCLGMAYKDELGEFSDYYSESHPAHKK 600 (753)
Q Consensus 524 -~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~ 600 (753)
.+.+|+|||||.|+++|+.+.. ++...|++++.++.+.+.+.++ +++|+|||++|||+...+.....
T Consensus 148 ~~~~l~vKGApe~iL~~C~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~k~~~~~~~~~~--------- 217 (239)
T d1wpga3 148 VGNKMFVKGAPEGVIDRCNYVRV-GTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKREEMV--------- 217 (239)
T ss_dssp GCSEEEEEECHHHHHHTEEEEEE-TTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEEESSCCCGGGCC---------
T ss_pred ceeEEEEeCChHHHHHhccceec-CCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEEEECCccccccc---------
Confidence 4689999999999999998775 6778899999999999999876 78999999999998554321111
Q ss_pred cCCCcccccCCCCeEEEEEccc
Q 004437 601 LLDPSCYSTIESDLVFVGVVGL 622 (753)
Q Consensus 601 ~~~~~~~~~~e~~l~~lG~i~~ 622 (753)
..+...+..+|+||+|+|++|+
T Consensus 218 ~~~~~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 218 LDDSSRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp TTCGGGHHHHTCSEEEEEEEEE
T ss_pred ccchhhHHHhcCCCEEEEEECC
Confidence 1112244567899999999986
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.88 E-value=1.4e-23 Score=186.00 Aligned_cols=102 Identities=42% Similarity=0.645 Sum_probs=93.4
Q ss_pred EEEccccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhc
Q 004437 617 VGVVGLRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKH 696 (753)
Q Consensus 617 lG~i~~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 696 (753)
.+.++++|++|++++++|+.|+++|++++|+|||+..+|..+|++|||
T Consensus 13 ~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI-------------------------------- 60 (135)
T d2b8ea1 13 TLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL-------------------------------- 60 (135)
T ss_dssp CCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTC--------------------------------
T ss_pred EEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhh--------------------------------
Confidence 457899999999999999999999999999999999999999999999
Q ss_pred CCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCccCC
Q 004437 697 GGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTEVI 753 (753)
Q Consensus 697 ~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~~ 753 (753)
..++++++|++|..+++.+|+. +.|+|+|||.||+|||++|||||||| +|++++
T Consensus 61 -~~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL~~Advgia~~-~~~~~~ 114 (135)
T d2b8ea1 61 -DLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAVG-SGSDVA 114 (135)
T ss_dssp -SEEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHHHHSSEEEEEC-CC----
T ss_pred -hhhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHHHhCCeeeecC-ccCHHH
Confidence 4799999999999999999864 69999999999999999999999999 888753
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.88 E-value=2.1e-28 Score=260.73 Aligned_cols=306 Identities=11% Similarity=-0.001 Sum_probs=196.8
Q ss_pred chhhhhcCCeeEEeeCCCcccccCceEEEEEEEcCcccceeeeeeecCcccCCCCCCcccCCCCCccHHHHHHHHHHhhc
Q 004437 351 LPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGRKTTISRIFHVEGTTYDPKDGGIVDWPCYNMDANLQAMAKICAVC 430 (753)
Q Consensus 351 ~~~le~lg~v~~i~~DKTGTLT~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 430 (753)
..+.|.||...++|+|||||+|.+.|++..+... ... .......++. -.++..+.++|
T Consensus 30 l~s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~~~-~il-----~~~k~~g~n~----------------~~dl~~~~~~~ 87 (380)
T d1qyia_ 30 LMDKCYLGLHSHIDWETLTDNDIQDIRNRIFQKD-KIL-----NKLKSLGLNS----------------NWDMLFIVFSI 87 (380)
T ss_dssp HHCTTTTCCSCCCCGGGCCHHHHHHHHHHHHTTT-HHH-----HHHHHTTCCC----------------HHHHHHHHHHH
T ss_pred hhchhhcccceeeecCcccchhhhhheeeeecch-hhh-----HhhhhcCCCh----------------hHHHHHHHHHH
Confidence 4456999999999999999999999987543211 000 0000001110 13344445555
Q ss_pred cCCeeecCCCcceecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecCCCC
Q 004437 431 NDAGVYCDGPLFRATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRI 510 (753)
Q Consensus 431 ~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~ 510 (753)
+.+... ...++|++.+++...+..+.... ...+.+.....+||++.
T Consensus 88 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~i~f~~~ 133 (380)
T d1qyia_ 88 HLIDIL------KKLSHDEIEAFMYQDEPVELKLQ----------------------------NISTNLADCFNLNEQLP 133 (380)
T ss_dssp HHHHHH------TTSCHHHHHHHHHCSSCHHHHHT----------------------------TSGGGCSSCCCCCTTTT
T ss_pred HHHHHH------hhcCCCcHHHHHHHHhhccchHH----------------------------HHHHhccccccCCcchH
Confidence 532211 22356666666544322111110 01455667778999999
Q ss_pred CceEEEEEecCCCeEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEeccccccccc
Q 004437 511 RKSMSVIVREPTGHNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDY 590 (753)
Q Consensus 511 ~k~~sviv~~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~ 590 (753)
+++|+++....++.+..+.+|+++.+. +++..+..+...+..++.+|+|++++|++.......
T Consensus 134 ~k~~~~~~~~~~~~~~~~~~~a~~~~~---------------~~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~~-- 196 (380)
T d1qyia_ 134 LQFLDNVKVGKNNIYAALEEFATTELH---------------VSDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEK-- 196 (380)
T ss_dssp HHHHTTCCSSHHHHHHHHHHHHHHHTT---------------CSCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHhhhcccccchhHhhhhccHhhcC---------------CcHHHHHHHHhHHHHHHHHHHHHHHHhhhccccccc--
Confidence 999988765444434444556665441 222334456677888999999999999875221100
Q ss_pred cccCcccccccCCCcccccCCCCeEEEEEccccCCCCc--hhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCC
Q 004437 591 YSESHPAHKKLLDPSCYSTIESDLVFVGVVGLRDPPRG--GVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGN 668 (753)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~~e~~l~~lG~i~~~d~~r~--~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~ 668 (753)
....+....|++..++++|| +++++|+.|+++|++++|+|||+..+|..+++++||...-
T Consensus 197 ------------------~~~~~~~~~g~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F 258 (380)
T d1qyia_ 197 ------------------KIARTTFKTGYIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYF 258 (380)
T ss_dssp ------------------SCCSCSSCCCTTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGS
T ss_pred ------------------ccchhhHhcccccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccC
Confidence 00122234588899998655 9999999999999999999999999999999999996421
Q ss_pred CccccccccchhhhccCH---------HHHHHHHHhcCCeEEEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhc
Q 004437 669 EDLTGRSFTGKEFMALSS---------TQQIEALSKHGGKVFSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLA 739 (753)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~v~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A 739 (753)
.. ..++++++...... ......+.. ...++|.+|.+|..+++.++..++.|+|+|||.||++|++.|
T Consensus 259 ~~--~~i~~~~d~~~~~~~~~~~~~~~KP~p~~~~~--~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~A 334 (380)
T d1qyia_ 259 EA--DFIATASDVLEAENMYPQARPLGKPNPFSYIA--ALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKI 334 (380)
T ss_dssp CG--GGEECHHHHHHHHHHSTTSCCCCTTSTHHHHH--HHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHH
T ss_pred Cc--ceEEecchhhhhhhhccccccccCCChHHHHH--HHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHC
Confidence 11 12333333210000 000011111 235678899999999999999999999999999999999999
Q ss_pred C---ceEecCCCCcc
Q 004437 740 D---IGVAMGITGTE 751 (753)
Q Consensus 740 ~---vgiamgi~g~~ 751 (753)
| |||+||+.|++
T Consensus 335 g~~~Igv~~G~~g~~ 349 (380)
T d1qyia_ 335 GATFIGTLTGLKGKD 349 (380)
T ss_dssp TCEEEEESCBTTBGG
T ss_pred CCCEEEEecCCCCcc
Confidence 9 99999987765
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.03 E-value=2.6e-10 Score=110.93 Aligned_cols=127 Identities=21% Similarity=0.198 Sum_probs=85.0
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccc----------------------------
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSF---------------------------- 676 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~---------------------------- 676 (753)
.+.+.+.++|++|+++|++++++|||+...+..+++.+++..+.....+..+
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 4779999999999999999999999999999999999988643111000000
Q ss_pred -----cch----hh----hccCHHHHHHHHHhcCCeEE---------EeeCchhHHHHHHHHHHc----CCeEEEEcCCc
Q 004437 677 -----TGK----EF----MALSSTQQIEALSKHGGKVF---------SRAEPRHKQEIVRMLKEM----GEVVAMTGDGV 730 (753)
Q Consensus 677 -----~~~----~~----~~~~~~~~~~~~~~~~~~v~---------~~~~p~~K~~~v~~l~~~----~~~v~~~GDg~ 730 (753)
... .+ .....+...+++.+....+. .......|...++.+.++ .+.|+++|||.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~~ 178 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGE 178 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHHHHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECSG
T ss_pred ccceeecccceeeEEEecccccHHHHHHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecCc
Confidence 000 00 01111223333333222211 122334688888776654 46799999999
Q ss_pred ccHHHhhhcCceEecCCCCccC
Q 004437 731 NDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 731 ND~~~l~~A~vgiamgi~g~~~ 752 (753)
||++||+.||+||||| ||.+.
T Consensus 179 NDi~ml~~ag~~vav~-na~~~ 199 (230)
T d1wr8a_ 179 NDLDAFKVVGYKVAVA-QAPKI 199 (230)
T ss_dssp GGHHHHHHSSEEEECT-TSCHH
T ss_pred cHHHHHHHCCeEEEEC-CCCHH
Confidence 9999999999999999 98763
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.00 E-value=4.3e-10 Score=113.41 Aligned_cols=42 Identities=21% Similarity=0.262 Sum_probs=39.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
.+.+.+.++|++|+++|++++++|||+...+..+++++++..
T Consensus 18 ~i~~~~~~~l~~l~~~Gi~~~i~TGR~~~~~~~~~~~l~~~~ 59 (285)
T d1nrwa_ 18 QVSLENENALRQAQRDGIEVVVSTGRAHFDVMSIFEPLGIKT 59 (285)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHGGGTCCC
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCc
Confidence 577999999999999999999999999999999999999864
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.98 E-value=7.9e-10 Score=108.43 Aligned_cols=44 Identities=9% Similarity=0.223 Sum_probs=39.8
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
.+...+.++++|++|+++|++++++|||+...+..+.+++++..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 44556889999999999999999999999999999999999864
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=98.97 E-value=6.3e-10 Score=111.32 Aligned_cols=44 Identities=18% Similarity=0.290 Sum_probs=40.5
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSG 667 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~ 667 (753)
..+.+++.++|++|+++|++++++|||+...+..+.+++++..+
T Consensus 20 ~~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~ 63 (271)
T d1rkqa_ 20 HTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQP 63 (271)
T ss_dssp SCCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCST
T ss_pred CccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCC
Confidence 35789999999999999999999999999999999999998764
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.96 E-value=1.4e-09 Score=105.39 Aligned_cols=129 Identities=17% Similarity=0.152 Sum_probs=85.4
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccc--------------------------
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSF-------------------------- 676 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~-------------------------- 676 (753)
+..+.+++.+++++|++.|++++++|||+...+..++..+|+..+.....+..+
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNEGTNKFLEEMSKR 97 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSHHHHHHHHHHTTT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCceEEeecceEEEeCCccEEEecChHHHHHHHHHHHHh
Confidence 345778999999999999999999999999999999999998653111000000
Q ss_pred -------cch--------hhhccCHHHHHHHHHhcCCeEEE-----ee--CchhHHHHHHHHHHc----CCeEEEEcCCc
Q 004437 677 -------TGK--------EFMALSSTQQIEALSKHGGKVFS-----RA--EPRHKQEIVRMLKEM----GEVVAMTGDGV 730 (753)
Q Consensus 677 -------~~~--------~~~~~~~~~~~~~~~~~~~~v~~-----~~--~p~~K~~~v~~l~~~----~~~v~~~GDg~ 730 (753)
... .......+............++. .. ....|...++.+.+. ...|+++|||.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~~GDs~ 177 (225)
T d1l6ra_ 98 TSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSN 177 (225)
T ss_dssp SSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTTEEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEECCSG
T ss_pred cCcceeecccceeeeeccccCHHHHHHHHHHHhhcCcEEEECCcEEEecCCccchHHHHHHHhhhhccchhheeeecCCc
Confidence 000 00000112222222222222221 12 234798888877654 35699999999
Q ss_pred ccHHHhhhcCceEecCCCCccC
Q 004437 731 NDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 731 ND~~~l~~A~vgiamgi~g~~~ 752 (753)
||.+|++.|++||||+ ||.+.
T Consensus 178 nD~~m~~~a~~~vav~-na~~~ 198 (225)
T d1l6ra_ 178 NDMPMFQLPVRKACPA-NATDN 198 (225)
T ss_dssp GGHHHHTSSSEEEECT-TSCHH
T ss_pred chHHHHHHCCeEEEEC-CCcHH
Confidence 9999999999999999 98753
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.87 E-value=1.4e-09 Score=104.75 Aligned_cols=108 Identities=22% Similarity=0.290 Sum_probs=78.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCcccc--ccccchhhhccCHHHHHHHHHhcCCeEEE
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTG--RSFTGKEFMALSSTQQIEALSKHGGKVFS 702 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 702 (753)
+++|++.+.|+.|++.|++++++||.....+.++++.+|+......... ...+|...... ....
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~v~an~~~~~~~G~~~g~~--------------~~~p 147 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFNGEYAGFD--------------ETQP 147 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECTTSCEEEEC--------------TTSG
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccceeeeeeeeeehhccccce--------------eeee
Confidence 3689999999999999999999999999999999999999632100000 00001000000 0000
Q ss_pred eeCchhHHHHHHHHHHc--CCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 703 RAEPRHKQEIVRMLKEM--GEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 703 ~~~p~~K~~~v~~l~~~--~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
...+..|..+++.+++. ...++++|||.||++|++.||++||+|
T Consensus 148 ~~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~ 193 (217)
T d1nnla_ 148 TAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFG 193 (217)
T ss_dssp GGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEEC
T ss_pred eeccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEEC
Confidence 12356799999988764 357999999999999999999999998
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.86 E-value=1.1e-08 Score=99.18 Aligned_cols=43 Identities=9% Similarity=0.079 Sum_probs=39.3
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCC
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFS 666 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~ 666 (753)
..+.+.++++|++|+++|++++++|||+...+..+.+++++..
T Consensus 20 ~~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~~ 62 (232)
T d1xvia_ 20 SYDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQG 62 (232)
T ss_dssp CCSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccCC
Confidence 3477899999999999999999999999999999999999853
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=98.85 E-value=1.2e-09 Score=109.07 Aligned_cols=49 Identities=33% Similarity=0.319 Sum_probs=41.3
Q ss_pred eeCch--hHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecCCCCccC
Q 004437 703 RAEPR--HKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 703 ~~~p~--~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~ 752 (753)
..+|. .|...++.+.++ .+.|+++|||.||.+||+.|+.||||| ||.+.
T Consensus 183 di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam~-Na~~~ 237 (269)
T d1rlma_ 183 DLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAMG-NAAEN 237 (269)
T ss_dssp EEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEECT-TCCHH
T ss_pred EEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEeC-CCCHH
Confidence 44554 599999888765 357999999999999999999999999 98763
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.84 E-value=1.3e-09 Score=108.36 Aligned_cols=44 Identities=39% Similarity=0.406 Sum_probs=38.9
Q ss_pred hHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecCCCCccC
Q 004437 708 HKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 708 ~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~ 752 (753)
.|...++.+.++ ...++++|||.||.+||+.|+.||||+ ||.+.
T Consensus 186 sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav~-na~~~ 233 (260)
T d2rbka1 186 TKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMG-QAKED 233 (260)
T ss_dssp SHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHH
T ss_pred CHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEeC-CCCHH
Confidence 698888888764 468999999999999999999999999 99753
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.83 E-value=2.7e-09 Score=98.20 Aligned_cols=85 Identities=20% Similarity=0.192 Sum_probs=70.0
Q ss_pred HHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeCchhHHH
Q 004437 632 KAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAEPRHKQE 711 (753)
Q Consensus 632 ~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~p~~K~~ 711 (753)
.+|+.|+..|+.+.++||+....+...++++++. .++.. ..+|..
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~---------------------------------~~~~~--~~~K~~ 83 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIK---------------------------------LFFLG--KLEKET 83 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCC---------------------------------EEEES--CSCHHH
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhccc---------------------------------ccccc--cccHHH
Confidence 4899999999999999999999999999999883 34433 345655
Q ss_pred HHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecCCCCccC
Q 004437 712 IVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 712 ~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~ 752 (753)
.++.+.++ ...|+++||+.||.+||+.|++|+||+ ||.+.
T Consensus 84 ~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap~-nA~~~ 127 (177)
T d1k1ea_ 84 ACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAVA-DAPIY 127 (177)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEECT-TSCHH
T ss_pred HHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEcC-CccHH
Confidence 55554433 578999999999999999999999999 98763
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.74 E-value=7.2e-09 Score=103.91 Aligned_cols=40 Identities=20% Similarity=0.125 Sum_probs=36.5
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKL 664 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi 664 (753)
.+.+.+.++|++|+++|++++++|||+...+..+++++++
T Consensus 28 ~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~~ 67 (283)
T d2b30a1 28 KVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENL 67 (283)
T ss_dssp CSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCc
Confidence 4789999999999999999999999999999998887753
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.68 E-value=1.8e-08 Score=100.25 Aligned_cols=44 Identities=32% Similarity=0.394 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHc----CCeEEEEcCCcccHHHhhhcCceEecCCCCccC
Q 004437 708 HKQEIVRMLKEM----GEVVAMTGDGVNDAPALKLADIGVAMGITGTEV 752 (753)
Q Consensus 708 ~K~~~v~~l~~~----~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~~ 752 (753)
.|...++.+.++ ...|+++|||.||.+||+.|++||||| ||.+.
T Consensus 190 ~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~~-na~~~ 237 (267)
T d1nf2a_ 190 DKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAME-NAIEK 237 (267)
T ss_dssp CHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEECT-TSCHH
T ss_pred chhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEeC-CCCHH
Confidence 699998888765 356999999999999999999999999 99864
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.66 E-value=9.8e-09 Score=99.32 Aligned_cols=113 Identities=20% Similarity=0.140 Sum_probs=82.4
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
+++|++.+.++.|++.|++++++|+.....+..+++.+|+..... .....+.+...... ............
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~-an~~~~~~~~~~~~--------~~~~~~~~~~~~ 145 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIY-CNHASFDNDYIHID--------WPHSCKGTCSNQ 145 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEE-EEEEECSSSBCEEE--------CTTCCCTTCCSC
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCcccee-eeeEEEeCCcceec--------cccccccccccC
Confidence 468999999999999999999999999999999999998743110 00000001000000 000001223345
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
.|..|..+++.++..++.|+|+||+.||++|++.||+++|++
T Consensus 146 k~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~~ 187 (226)
T d2feaa1 146 CGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARD 187 (226)
T ss_dssp CSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECH
T ss_pred CHHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEec
Confidence 788899999999988999999999999999999999999987
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.57 E-value=9.3e-08 Score=93.44 Aligned_cols=122 Identities=18% Similarity=0.168 Sum_probs=78.2
Q ss_pred hhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccc--cccc-cchh--------hh---------------
Q 004437 629 GVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLT--GRSF-TGKE--------FM--------------- 682 (753)
Q Consensus 629 ~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~--~~~~-~~~~--------~~--------------- 682 (753)
+...++.++++.|+.++++|||+...+..+.+++++..+...+. +..+ ..+. +.
T Consensus 22 ~~~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (244)
T d1s2oa1 22 EHLQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGF 101 (244)
T ss_dssp HHHHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhc
Confidence 45567777889999999999999999999999999865421110 0000 0000 00
Q ss_pred ----------------------ccCH---HHHHHHHHhcC----------CeEEEeeCchhHHHHHHHHHHc----CCeE
Q 004437 683 ----------------------ALSS---TQQIEALSKHG----------GKVFSRAEPRHKQEIVRMLKEM----GEVV 723 (753)
Q Consensus 683 ----------------------~~~~---~~~~~~~~~~~----------~~v~~~~~p~~K~~~v~~l~~~----~~~v 723 (753)
.... +.....+.... ..+-.......|...++.+.+. ...|
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~ 181 (244)
T d1s2oa1 102 EALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQT 181 (244)
T ss_dssp TTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGE
T ss_pred ccccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhE
Confidence 0000 11111221110 1111122345799999988776 2569
Q ss_pred EEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 724 AMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 724 ~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
+++|||.||.+||+.||.|+||| |+.+
T Consensus 182 v~~GD~~ND~~Ml~~~~~~vav~-na~~ 208 (244)
T d1s2oa1 182 LVCGDSGNDIGLFETSARGVIVR-NAQP 208 (244)
T ss_dssp EEEECSGGGHHHHTSSSEEEECT-TCCH
T ss_pred EEEcCCCCCHHHHhhCCcEEEeC-CCCH
Confidence 99999999999999999999999 8764
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.55 E-value=5.4e-08 Score=92.08 Aligned_cols=107 Identities=16% Similarity=0.145 Sum_probs=75.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
+..++....++.+ +.+.+++++|+.............++....... ...... .........
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~----------------~~~~~~~~~ 129 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCHK--LEIDDS----------------DRVVGYQLR 129 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEEE--EEECTT----------------SCEEEEECC
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcce--eeeecc----------------ccccccccc
Confidence 3455666666665 578999999999999999999998875321100 000000 001223334
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
.+..+...++.++...+.|+|+|||.||++||+.||+||||+ ++.+
T Consensus 130 ~~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAmn-a~~~ 175 (206)
T d1rkua_ 130 QKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APEN 175 (206)
T ss_dssp SSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEES-CCHH
T ss_pred chhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEEC-CCHH
Confidence 555667788888888999999999999999999999999996 6543
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.24 E-value=1e-06 Score=83.19 Aligned_cols=109 Identities=21% Similarity=0.237 Sum_probs=72.2
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEE
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFS 702 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 702 (753)
..++.+++.+.++.++..|..++++||.....+....++.++..... ..+..+.... .....
T Consensus 73 ~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--------------~~~~~ 134 (210)
T d1j97a_ 73 RITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFA----NRLIVKDGKL--------------TGDVE 134 (210)
T ss_dssp TCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEE----EEEEEETTEE--------------EEEEE
T ss_pred hhhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhh----hhhccccccc--------------ccccc
Confidence 34678899999999999999999999999999999888887743110 0000000000 00011
Q ss_pred e--eCchhHHHHHHHH----HHcCCeEEEEcCCcccHHHhhhcCceEecCCCCcc
Q 004437 703 R--AEPRHKQEIVRML----KEMGEVVAMTGDGVNDAPALKLADIGVAMGITGTE 751 (753)
Q Consensus 703 ~--~~p~~K~~~v~~l----~~~~~~v~~~GDg~ND~~~l~~A~vgiamgi~g~~ 751 (753)
. ..+..|...+..+ +-..+.++++|||.||++|++.||+|||| ||.|
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~va~--na~~ 187 (210)
T d1j97a_ 135 GEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAF--CAKP 187 (210)
T ss_dssp CSSCSTTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEEEE--SCCH
T ss_pred ccccccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCEEE--CCCH
Confidence 1 1122333443333 33356799999999999999999999999 4543
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.11 E-value=4e-07 Score=88.19 Aligned_cols=44 Identities=16% Similarity=0.215 Sum_probs=38.2
Q ss_pred hHHHHHHHHHHc-CCeEEEEcC----CcccHHHhhhcC-ceEecCCCCccC
Q 004437 708 HKQEIVRMLKEM-GEVVAMTGD----GVNDAPALKLAD-IGVAMGITGTEV 752 (753)
Q Consensus 708 ~K~~~v~~l~~~-~~~v~~~GD----g~ND~~~l~~A~-vgiamgi~g~~~ 752 (753)
.|...++.|.+. ...|+++|| |.||.+||+.|+ .|+||+ |+.|.
T Consensus 185 sKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av~-na~~~ 234 (244)
T d2fuea1 185 DKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSVV-SPQDT 234 (244)
T ss_dssp STTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEECS-SHHHH
T ss_pred cHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEcC-CHHHH
Confidence 689999998765 668999999 569999999998 699999 98774
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.08 E-value=1.8e-06 Score=82.72 Aligned_cols=38 Identities=18% Similarity=0.337 Sum_probs=32.2
Q ss_pred hHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEecC
Q 004437 708 HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAMG 746 (753)
Q Consensus 708 ~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiamg 746 (753)
.|...++.+.+. ..++++||+.||.+||+.|+.|+||+
T Consensus 159 ~Kg~al~~l~~~-~~~i~~GDs~ND~~Mf~~~~~~~av~ 196 (229)
T d1u02a_ 159 NKGSAIRSVRGE-RPAIIAGDDATDEAAFEANDDALTIK 196 (229)
T ss_dssp CHHHHHHHHHTT-SCEEEEESSHHHHHHHHTTTTSEEEE
T ss_pred CHHHHHHHHhcc-ccceeecCCCChHHHHhccCCeEEEE
Confidence 699999999876 57899999999999999996665554
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.70 E-value=3.9e-06 Score=80.93 Aligned_cols=44 Identities=18% Similarity=0.268 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHc-CCeEEEEcC----CcccHHHhhhcC-ceEecCCCCccC
Q 004437 708 HKQEIVRMLKEM-GEVVAMTGD----GVNDAPALKLAD-IGVAMGITGTEV 752 (753)
Q Consensus 708 ~K~~~v~~l~~~-~~~v~~~GD----g~ND~~~l~~A~-vgiamgi~g~~~ 752 (753)
+|...++.|.+. .+.|++||| |.||.+||+.|+ .|++|+ |+.|+
T Consensus 185 sKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v~-~~~~~ 234 (243)
T d2amya1 185 DKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSVT-APEDT 234 (243)
T ss_dssp SGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEECS-SHHHH
T ss_pred CHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEeC-CHHHH
Confidence 588888777654 678999999 889999999998 688888 76653
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.27 E-value=0.00014 Score=71.23 Aligned_cols=99 Identities=14% Similarity=0.200 Sum_probs=64.7
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccc--cchhhhccCHHHHHHHHHhcCCeEEE
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSF--TGKEFMALSSTQQIEALSKHGGKVFS 702 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~ 702 (753)
++|+++++.++.|++.|+++.++||--...+.++++++|+..+...+.++.+ .++.+. .-+-
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ni~I~sN~l~f~~~~~~----------------~~~~ 198 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVKVVSNFMDFDENGVL----------------KGFK 198 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBTTEEEEEECEEECTTSBE----------------EEEC
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCccCceEEeeEEEEeCCeeE----------------eecc
Confidence 4899999999999999999999999999999999999998654322211111 110000 0000
Q ss_pred e--eCchhHHHHH----HHHHH--cCCeEEEEcCCcccHHHhhhc
Q 004437 703 R--AEPRHKQEIV----RMLKE--MGEVVAMTGDGVNDAPALKLA 739 (753)
Q Consensus 703 ~--~~p~~K~~~v----~~l~~--~~~~v~~~GDg~ND~~~l~~A 739 (753)
. .....|...+ ..++. ....|.++|||.||+.|.+.+
T Consensus 199 ~~~i~~~~K~~~~~~~~~~~~~~~~~~~vI~iGDs~~Dl~Ma~g~ 243 (291)
T d2bdua1 199 GELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGV 243 (291)
T ss_dssp SSCCCTTCHHHHHHTTHHHHHHTTTCCEEEEEESSSGGGGTTTTC
T ss_pred CCccccccCcchhhhhHHHHhccCCcCcEEEEeCCHhHHHHHhCC
Confidence 0 1222343322 22232 356799999999999998753
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.25 E-value=0.00019 Score=67.57 Aligned_cols=95 Identities=18% Similarity=0.140 Sum_probs=68.5
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 705 (753)
+.|++.++++.|+++|+++.++|+.+...+..+.+.+|+...- ..++.+++... ..-.
T Consensus 89 ~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F----~~i~~~~~~~~------------------~Kp~ 146 (218)
T d1te2a_ 89 LLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSF----DALASAEKLPY------------------SKPH 146 (218)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGC----SEEEECTTSSC------------------CTTS
T ss_pred ccchHHHHHHHhhhccccccccccccccccccccccccccccc----ccccccccccc------------------chhh
Confidence 4699999999999999999999999999999999999995311 11222211100 0111
Q ss_pred chhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce
Q 004437 706 PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG 742 (753)
Q Consensus 706 p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg 742 (753)
|+-=..+++.+.-..+.+++|||+.+|+.|-+.||+.
T Consensus 147 ~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~ 183 (218)
T d1te2a_ 147 PQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMR 183 (218)
T ss_dssp THHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCE
Confidence 2223455555555567899999999999999999974
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.04 E-value=0.00032 Score=66.08 Aligned_cols=94 Identities=14% Similarity=0.123 Sum_probs=67.9
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 705 (753)
+.+++.+.++.|++.|+++.++|+.....+..+.+.+||...-. .++...... ...-.
T Consensus 96 l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~----~~~~~~~~~------------------~~kp~ 153 (224)
T d2hsza1 96 LYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFS----EMLGGQSLP------------------EIKPH 153 (224)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS----EEECTTTSS------------------SCTTS
T ss_pred hHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhcc----ccccccccc------------------ccccc
Confidence 57999999999999999999999999999999999999853211 011111000 00112
Q ss_pred chhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc
Q 004437 706 PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 706 p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
|+--..+.+.++-....++||||+.+|+.+-+.||+
T Consensus 154 p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~ 189 (224)
T d2hsza1 154 PAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGC 189 (224)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTC
T ss_pred chhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCC
Confidence 333344555555557789999999999999999986
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=96.91 E-value=0.00072 Score=63.91 Aligned_cols=97 Identities=14% Similarity=0.127 Sum_probs=64.8
Q ss_pred CCchhHHHHHHHHhCC-CeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 626 PRGGVDKAIDDCRGAG-IEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~g-i~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
+-|++.+++++|++.| +++.++|+.....+..+.+.+|+...-. .++.+++.. .-
T Consensus 92 ~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd----~i~~~~~~~--------------------~~ 147 (228)
T d2hcfa1 92 LLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFP----FGAFADDAL--------------------DR 147 (228)
T ss_dssp ECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCS----CEECTTTCS--------------------SG
T ss_pred ecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhccccccc----ccccccccc--------------------cc
Confidence 3579999999999987 8999999999999999999999964221 111111100 00
Q ss_pred Cc--hhHHHHHHHHHH---cCCeEEEEcCCcccHHHhhhcCc---eEecC
Q 004437 705 EP--RHKQEIVRMLKE---MGEVVAMTGDGVNDAPALKLADI---GVAMG 746 (753)
Q Consensus 705 ~p--~~K~~~v~~l~~---~~~~v~~~GDg~ND~~~l~~A~v---giamg 746 (753)
.| ..-...++.+.. ..+.++||||+.+|+.|-+.|++ +|+.|
T Consensus 148 k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~i~v~~g 197 (228)
T d2hcfa1 148 NELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARSIAVATG 197 (228)
T ss_dssp GGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEEEEECCS
T ss_pred cchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEEEEEcCC
Confidence 11 111122233322 23679999999999999999994 55545
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.87 E-value=0.00066 Score=62.94 Aligned_cols=98 Identities=13% Similarity=0.117 Sum_probs=65.9
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 705 (753)
+.|++.++++.|++.|+++.++|+... .+..+.+.+|+...- ..++..+... ...-.
T Consensus 83 ~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f----~~i~~s~~~~------------------~~Kp~ 139 (204)
T d2go7a1 83 LMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYF----TEILTSQSGF------------------VRKPS 139 (204)
T ss_dssp ECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGE----EEEECGGGCC------------------CCTTS
T ss_pred ccchHHhhhhcccccccchhhhcccch-hhhhhhhhccccccc----cccccccccc------------------ccchh
Confidence 569999999999999999999998765 456778889985311 1111111110 00112
Q ss_pred chhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCce-EecC
Q 004437 706 PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIG-VAMG 746 (753)
Q Consensus 706 p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vg-iamg 746 (753)
|+--..+++.+.-....++||||+.+|+.+-+.||+. |.+.
T Consensus 140 ~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v~ 181 (204)
T d2go7a1 140 PEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINFL 181 (204)
T ss_dssp SHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEESS
T ss_pred HHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEEc
Confidence 3333445555554467899999999999999999984 4444
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.84 E-value=0.0014 Score=58.33 Aligned_cols=88 Identities=7% Similarity=-0.044 Sum_probs=62.9
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCCh-HHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNK-STAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~-~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
++.|++.++++.|+++|+++.++|..+. ..+..+.+..++.... ..+...
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~~~~~-----------------------------~~~~~~ 96 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYF-----------------------------IQREIY 96 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTCGGGC-----------------------------SEEEES
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccccccc-----------------------------eeeecc
Confidence 4789999999999999999999997655 4556666777763211 233333
Q ss_pred eCchhH--HHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc
Q 004437 704 AEPRHK--QEIVRMLKEMGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 704 ~~p~~K--~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
..|..+ ..+++.+.-..+.+++|||..+|+.+-+.||+
T Consensus 97 ~kp~~~~~~~~~~~~~~~~~~~l~igD~~~di~aA~~aG~ 136 (164)
T d1u7pa_ 97 PGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGV 136 (164)
T ss_dssp SSCHHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHTTTC
T ss_pred cCCChHHHHHHHHHhCCChHHEEEEcCCHHHHHHHHHcCC
Confidence 334322 33344444446789999999999999999998
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=96.62 E-value=0.002 Score=55.29 Aligned_cols=108 Identities=15% Similarity=0.187 Sum_probs=70.8
Q ss_pred ecCCchHHHHHHHHHHcCCCCcCCCcccchhhhhhhhcccccccccccccccccccceeeeecCCCCCceEEEEEecCCC
Q 004437 444 ATGLPTEAALKVLVEKMGFPDVKGRNKISDTQLAANYLIDSSTVRLGCCEWWTKRSKRVATLEFDRIRKSMSVIVREPTG 523 (753)
Q Consensus 444 ~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~s~~k~~sviv~~~~~ 523 (753)
.+.||...|++.+|++.+...... ........+||....+...+.+. |
T Consensus 28 ~SeHPlakAIv~~Ak~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~g~~~~---g 75 (136)
T d2a29a1 28 ADETPEGRSIVILAKQRFNLRERD-----------------------------VQSLHATFVPFTAQSRMSGINID---N 75 (136)
T ss_dssp TCCSHHHHHHHHHHHHHHCCCCCC-----------------------------TTTTTCEEEEEETTTTEEEEEET---T
T ss_pred CCCchHHHHHHHHHHHhcCCCccc-----------------------------cccccccccccccccceEEEEEC---C
Confidence 345999999999998765433211 12222345667666655555442 2
Q ss_pred eEEEEEcCChHHHHHhcccccccCCceeeCCHHHHHHHHHHHHHhhhccceEEEEEEeccccccccccccCcccccccCC
Q 004437 524 HNQLLVKGSVESLLERSSHVQLADGSVVPLDEPCWQLMLSRHLEMSSKGLRCLGMAYKDELGEFSDYYSESHPAHKKLLD 603 (753)
Q Consensus 524 ~~~~~~KGa~e~il~~c~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~rvl~~A~k~~~~~~~~~~~~~~~~~~~~~~ 603 (753)
..+..|++..+....... + ..++ ..+.+.++++..+|.+++.+|.
T Consensus 76 --~~v~~G~~~~~~~~~~~~----g--~~~~----~~~~~~~~~~~~~G~Tvv~Va~----------------------- 120 (136)
T d2a29a1 76 --RMIRKGSVDAIRRHVEAN----G--GHFP----TDVDQKVDQVARQGATPLVVVE----------------------- 120 (136)
T ss_dssp --EEEEEECHHHHHHHHHHH----T--CCCC----HHHHHHHHHHHHTTSEEEEEEE-----------------------
T ss_pred --EEEEecHHHHHHHHHHHc----C--CCCc----HHHHHHHHHHHHCCCeEEEEEE-----------------------
Confidence 356679998776653221 1 0122 3456778889999999999985
Q ss_pred CcccccCCCCeEEEEEccccCCCC
Q 004437 604 PSCYSTIESDLVFVGVVGLRDPPR 627 (753)
Q Consensus 604 ~~~~~~~e~~l~~lG~i~~~d~~r 627 (753)
|.+++|++++.|+++
T Consensus 121 ---------d~~~~G~i~l~D~iK 135 (136)
T d2a29a1 121 ---------GSRVLGVIALKDIVK 135 (136)
T ss_dssp ---------TTEEEEEEEEEESSC
T ss_pred ---------CCEEEEEEEEEeecC
Confidence 347999999999986
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=96.45 E-value=0.0013 Score=57.49 Aligned_cols=99 Identities=14% Similarity=0.073 Sum_probs=59.6
Q ss_pred ccCCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcC-CeE
Q 004437 622 LRDPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHG-GKV 700 (753)
Q Consensus 622 ~~d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 700 (753)
.++.+.+++.+.++.|+++|++++++|+++......+.+.++.. + .....+.... ...
T Consensus 33 ~~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~~~~~~t~~~l~~~------------~---------~~~~~~~~~~~~~~ 91 (149)
T d1ltqa1 33 DTDVINPMVVELSKMYALMGYQIVVVSGRESGTKEDPTKYYRMT------------R---------KWVEDIAGVPLVMQ 91 (149)
T ss_dssp GGCCBCHHHHHHHHHHHHTTCEEEEEECSCCCCSSSTTHHHHHH------------H---------HHHHHTTCCCCSEE
T ss_pred ccCccCHHHHHHHHHHHhccCeEEEEecCcHHHHHHHHHHHHHH------------h---------hhhhhcCCCcEEEe
Confidence 35788999999999999999999999999743221111111000 0 0000000000 122
Q ss_pred EEee------CchhHHHHHHHHHHcC-CeEEEEcCCcccHHHhhhcCc
Q 004437 701 FSRA------EPRHKQEIVRMLKEMG-EVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 701 ~~~~------~p~~K~~~v~~l~~~~-~~v~~~GDg~ND~~~l~~A~v 741 (753)
+.+. .+.-|..+++.+...+ ..++|+||...|+.|.+.+|+
T Consensus 92 ~~~~~~~~~~d~~~k~~~l~~~~~~~~~i~~~igD~~~dv~a~~~~Gi 139 (149)
T d1ltqa1 92 CQREQGDTRKDDVVKEEIFWKHIAPHFDVKLAIDDRTQVVEMWRRIGV 139 (149)
T ss_dssp EECCTTCCSCHHHHHHHHHHHHTTTTCEEEEEEECCHHHHHHHHHTTC
T ss_pred ecccccccCCchHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHHCCC
Confidence 2221 1234666666665554 456889999999999999997
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.40 E-value=0.0022 Score=59.38 Aligned_cols=88 Identities=16% Similarity=0.184 Sum_probs=63.9
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.++..+ ++.++|+.+...+..+.+.+|+...-. ..+.+..
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd----------------------------~v~~~~~ 134 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFD----------------------------GIYGSSP 134 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------EEEEECS
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccccc----------------------------ccccccc
Confidence 46689999999999775 899999999999999999999864221 1122222
Q ss_pred CchhHHHHHH----HHHHcCCeEEEEcCCcccHHHhhhcCc
Q 004437 705 EPRHKQEIVR----MLKEMGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 705 ~p~~K~~~v~----~l~~~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
.+..|-..+. .++-....++||||+.+|+.|-+.||+
T Consensus 135 ~~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi 175 (210)
T d2ah5a1 135 EAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGI 175 (210)
T ss_dssp SCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTC
T ss_pred cccccccccchhhhhhhcccccceeecCCHHHHHHHHHcCC
Confidence 2333333333 333335689999999999999999997
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.40 E-value=0.0036 Score=59.34 Aligned_cols=99 Identities=15% Similarity=0.047 Sum_probs=68.4
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
-.+.|++.+++++|+++|+++.++|+............+|+..-.... ....+.. .+
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~---~~~~d~~--------------------~~ 182 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELV---DGHFDTK--------------------IG 182 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGC---SEEECGG--------------------GC
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhc---ceeeccc--------------------cc
Confidence 346899999999999999999999999999988889989875321110 0000000 01
Q ss_pred eCch--hHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEec
Q 004437 704 AEPR--HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVAM 745 (753)
Q Consensus 704 ~~p~--~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgiam 745 (753)
..|+ -=...++.+.-....++||||..+|+.+=+.||+-.+.
T Consensus 183 ~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~ 226 (253)
T d1zs9a1 183 HKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAV 226 (253)
T ss_dssp CTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEE
T ss_pred cCCCcHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEE
Confidence 1222 12334444444467899999999999999999985443
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.33 E-value=0.003 Score=60.63 Aligned_cols=96 Identities=21% Similarity=0.208 Sum_probs=68.6
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.++++.|++.|+++.++|+.+...+..+.+.+|+..... ..++++++... ..-
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~~~f~---d~~~~~d~~~~------------------~KP 157 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKP---DFLVTPDDVPA------------------GRP 157 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCC---SCCBCGGGSSC------------------CTT
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhccccc---ccccccccccc------------------ccc
Confidence 477999999999999999999999999999999999988854211 11222222110 011
Q ss_pred CchhHHHHHHHHHHc-CCeEEEEcCCcccHHHhhhcCc
Q 004437 705 EPRHKQEIVRMLKEM-GEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~-~~~v~~~GDg~ND~~~l~~A~v 741 (753)
.|+.=...++.+.-. .+.|+||||+.+|+.+=+.||+
T Consensus 158 ~p~~~~~~~~~l~~~p~~~~v~VgDs~~Di~aA~~aG~ 195 (257)
T d1swva_ 158 YPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGM 195 (257)
T ss_dssp SSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTS
T ss_pred ChHHHHHHHHHhCCCCcceEEEEeCChhhHHHHHHCCC
Confidence 233334555555533 4679999999999999999995
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=96.11 E-value=0.0027 Score=57.94 Aligned_cols=88 Identities=18% Similarity=0.317 Sum_probs=62.8
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCCh----HHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEE
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNK----STAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 701 (753)
+.+++.+.++.+++.|++|+.+|||.. .|+..+.+.+|+...... ..++
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~~~~~---------------------------~vll 139 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPATNMN---------------------------PVIF 139 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCTTTBC---------------------------CCEE
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCccccc---------------------------ceEe
Confidence 457999999999999999999999964 355666677888543211 2233
Q ss_pred EeeCc--hhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc-eEe
Q 004437 702 SRAEP--RHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI-GVA 744 (753)
Q Consensus 702 ~~~~p--~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v-gia 744 (753)
.+..+ ..|...|+. -..++++||..+|..+-..|++ +|-
T Consensus 140 ~~~~~~K~~rr~~Ik~----y~I~l~~GD~l~Df~aA~eagi~~iR 181 (209)
T d2b82a1 140 AGDKPGQNTKSQWLQD----KNIRIFYGDSDNDITAARDVGARGIR 181 (209)
T ss_dssp CCCCTTCCCSHHHHHH----TTEEEEEESSHHHHHHHHHTTCEEEE
T ss_pred eCCCCCchHHHHHHHH----cCeEEEecCCHHHHhHHHHcCCCceE
Confidence 33222 345555543 3689999999999999999986 443
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=95.97 E-value=0.00092 Score=62.08 Aligned_cols=96 Identities=10% Similarity=0.180 Sum_probs=65.3
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEeeC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRAE 705 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 705 (753)
+.|++.+.++.|++ ++++.++|+.....+..+.+.+|+...- ..++.++... ...-.
T Consensus 83 ~~~g~~~~L~~l~~-~~~~~ivT~~~~~~~~~~l~~~~l~~~f----~~i~~~~~~~------------------~~KP~ 139 (207)
T d2hdoa1 83 LYPGITSLFEQLPS-ELRLGIVTSQRRNELESGMRSYPFMMRM----AVTISADDTP------------------KRKPD 139 (207)
T ss_dssp ECTTHHHHHHHSCT-TSEEEEECSSCHHHHHHHHTTSGGGGGE----EEEECGGGSS------------------CCTTS
T ss_pred cccchhhhhhhhcc-cccccccccccccccccccccccccccc----cccccccccc------------------cchhh
Confidence 55899999999975 7999999999999999999999885311 1111111110 00012
Q ss_pred chhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEe
Q 004437 706 PRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA 744 (753)
Q Consensus 706 p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 744 (753)
|+--..+++.++-..+.++||||+.+|+.+-+.||+...
T Consensus 140 p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i 178 (207)
T d2hdoa1 140 PLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFG 178 (207)
T ss_dssp SHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred hhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEE
Confidence 232344444444345689999999999999999998654
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=95.73 E-value=0.0032 Score=60.42 Aligned_cols=36 Identities=6% Similarity=0.262 Sum_probs=30.1
Q ss_pred CchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHc
Q 004437 627 RGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQI 662 (753)
Q Consensus 627 r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~ 662 (753)
-+++.++|++|+++|++++++|++...+...+++++
T Consensus 20 i~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 20 IPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred CccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 378999999999999999999988777666665544
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=95.42 E-value=0.011 Score=56.23 Aligned_cols=45 Identities=7% Similarity=0.077 Sum_probs=33.3
Q ss_pred cCCCCchhHHHHHHHHhCCCeEEEEcC---CChHHHHHHHHHcCCCCC
Q 004437 623 RDPPRGGVDKAIDDCRGAGIEVMVITG---DNKSTAEAICRQIKLFSG 667 (753)
Q Consensus 623 ~d~~r~~~~~~i~~l~~~gi~v~i~TG---d~~~~a~~ia~~~gi~~~ 667 (753)
.+.+=+++.++|+.|+++|++++++|+ +.........+++|+.-+
T Consensus 17 ~~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~ 64 (250)
T d2c4na1 17 DNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVP 64 (250)
T ss_dssp TTEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCC
T ss_pred CCCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccccc
Confidence 334447899999999999999999984 455555555667887543
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=95.42 E-value=0.012 Score=54.19 Aligned_cols=25 Identities=36% Similarity=0.408 Sum_probs=22.9
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGD 650 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd 650 (753)
+-|++.++|++|+++|++++++|-.
T Consensus 49 l~pgv~e~L~~L~~~G~~l~IvTNQ 73 (209)
T d2o2xa1 49 LRPQMLPAIATANRAGIPVVVVTNQ 73 (209)
T ss_dssp BCGGGHHHHHHHHHHTCCEEEEEEC
T ss_pred ecccHHHHHHHHHhhCCeEEEeccc
Confidence 5689999999999999999999953
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.41 E-value=0.01 Score=53.63 Aligned_cols=94 Identities=14% Similarity=0.096 Sum_probs=60.1
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+.++.|++.|+++.++|+.+... ..+.+.+|+... ...++.++.... ..-
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~~-~~~l~~~~l~~~----fd~i~~~~~~~~------------------~KP 135 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQV-LEILEKTSIAAY----FTEVVTSSSGFK------------------RKP 135 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTHH-HHHHHHTTCGGG----EEEEECGGGCCC------------------CTT
T ss_pred cccchhHHHHHHHHhhhccccccccCccch-hhhhhhhccccc----cccccccccccc------------------cCC
Confidence 456899999999999999999999977654 456788887431 111122211110 000
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceE
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGV 743 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgi 743 (753)
.|+--..+++.+. ...+++|||..+|+.+=+.||+-.
T Consensus 136 ~p~~~~~~~~~~~--~~~~l~vgDs~~Di~aA~~aG~~~ 172 (187)
T d2fi1a1 136 NPESMLYLREKYQ--ISSGLVIGDRPIDIEAGQAAGLDT 172 (187)
T ss_dssp SCHHHHHHHHHTT--CSSEEEEESSHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHcC--CCCeEEEeCCHHHHHHHHHcCCEE
Confidence 1222223333332 346899999999999999998753
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.02 E-value=0.016 Score=54.66 Aligned_cols=93 Identities=15% Similarity=0.120 Sum_probs=63.5
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+.+++.++++.|++ |++++++|+.+........+.+|+...-. .++.+.+.. ..
T Consensus 109 ~~~~~~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd----~i~~s~~~~--------------------~~ 163 (247)
T d2gfha1 109 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFD----AIVIGGEQK--------------------EE 163 (247)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCS----EEEEGGGSS--------------------SC
T ss_pred ccCccHHHHHHHhhc-ccceEEeecccchhhhhhhhhcccccccc----ccccccccc--------------------cc
Confidence 367999999999985 89999999999998899999999853211 111111110 00
Q ss_pred Cch--hHHHHHHHHHHcCCeEEEEcCCc-ccHHHhhhcCce
Q 004437 705 EPR--HKQEIVRMLKEMGEVVAMTGDGV-NDAPALKLADIG 742 (753)
Q Consensus 705 ~p~--~K~~~v~~l~~~~~~v~~~GDg~-ND~~~l~~A~vg 742 (753)
.|. -=..+++.+.-..+.++||||.. +|+.+=+.||+.
T Consensus 164 KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~ 204 (247)
T d2gfha1 164 KPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLK 204 (247)
T ss_dssp TTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCS
T ss_pred hhhhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCe
Confidence 111 11334444444456799999995 899999999985
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=94.97 E-value=0.02 Score=51.40 Aligned_cols=27 Identities=22% Similarity=0.352 Sum_probs=24.5
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCCh
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNK 652 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~ 652 (753)
+-+++.++++.|+++|++++++|..+.
T Consensus 28 ~~~gv~e~l~~L~~~g~~~~ivTNq~~ 54 (182)
T d2gmwa1 28 FIDGVIDAMRELKKMGFALVVVTNQSG 54 (182)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEECTH
T ss_pred ECCCHHHHHHHHhhcCchhhhhhccch
Confidence 458999999999999999999999874
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.79 E-value=0.014 Score=54.49 Aligned_cols=93 Identities=16% Similarity=0.068 Sum_probs=62.4
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.|++.++++.|+ +|++++++|+........+.+.+|+...-. .++...+.. ..
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd----~i~~s~~~~--------------------~~ 154 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFD----SITTSEEAG--------------------FF 154 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCS----EEEEHHHHT--------------------BC
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhcccccccccc----ccccccccc--------------------cc
Confidence 46789999999996 589999999999988999999999853211 111111110 01
Q ss_pred Cch--hHHHHHHHHHHcCCeEEEEcCC-cccHHHhhhcCce
Q 004437 705 EPR--HKQEIVRMLKEMGEVVAMTGDG-VNDAPALKLADIG 742 (753)
Q Consensus 705 ~p~--~K~~~v~~l~~~~~~v~~~GDg-~ND~~~l~~A~vg 742 (753)
.|+ -=..+++.+.-....+++|||. .+|+.+-+.||+-
T Consensus 155 KP~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~ 195 (230)
T d1x42a1 155 KPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMT 195 (230)
T ss_dssp TTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCE
T ss_pred chhhHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCE
Confidence 122 1123334444345679999997 5899998889874
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=93.85 E-value=0.02 Score=52.98 Aligned_cols=99 Identities=12% Similarity=0.096 Sum_probs=63.7
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
.++-+++.+.++.|++.|+++.++|+... +....+..|+...-. .++.++... ...
T Consensus 90 ~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~~f~----~i~~~~~~~------------------~~K 145 (221)
T d1o08a_ 90 ADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTGYFD----AIADPAEVA------------------ASK 145 (221)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGGGCS----EECCTTTSS------------------SCT
T ss_pred ccccCCceeccccccccccceEEEeecch--hhHHHHhhccccccc----ccccccccc------------------ccc
Confidence 34678999999999999999999999754 567788888854211 111111110 000
Q ss_pred eCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc-eEecC
Q 004437 704 AEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI-GVAMG 746 (753)
Q Consensus 704 ~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v-giamg 746 (753)
-.|+-=..+++.++-..+.++||||..+|+.+-+.||+ .|+++
T Consensus 146 P~~~~~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~ 189 (221)
T d1o08a_ 146 PAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVG 189 (221)
T ss_dssp TSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEES
T ss_pred cChHHHHHHHHHcCCCCceEEEEecCHHHHHHHHHcCCEEEEEC
Confidence 01111123333343346679999999999999999997 44444
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=92.97 E-value=0.032 Score=48.92 Aligned_cols=26 Identities=23% Similarity=0.298 Sum_probs=23.6
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCC
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDN 651 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~ 651 (753)
+-|++.++++.|+++|++++++|..+
T Consensus 31 ~~pgv~e~L~~L~~~g~~l~i~TNq~ 56 (161)
T d2fpwa1 31 FEPGVIPQLLKLQKAGYKLVMITNQD 56 (161)
T ss_dssp BCTTHHHHHHHHHHTTEEEEEEEECT
T ss_pred ECccHHHHHHHHHHcCCceeeecccc
Confidence 56899999999999999999999754
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=92.88 E-value=0.056 Score=49.63 Aligned_cols=98 Identities=10% Similarity=0.179 Sum_probs=66.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+.+++.++++.+++.|+++.++|.-....+....+..++...-. .++....... ..-
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd----~~~~s~~~~~------------------~KP 150 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFD----HLLSVDPVQV------------------YKP 150 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS----EEEESGGGTC------------------CTT
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhcccccccc----ceeeeeeeec------------------ccc
Confidence 356889999999999999999999999999888888888753211 1111111100 000
Q ss_pred CchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCceEe
Q 004437 705 EPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADIGVA 744 (753)
Q Consensus 705 ~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~vgia 744 (753)
.|+-=..+++.+.-....+++|||..+|+.+=+.||+-.+
T Consensus 151 ~p~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v 190 (220)
T d1zrna_ 151 DNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTC 190 (220)
T ss_dssp SHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEE
Confidence 1122233444454446789999999999999999997543
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=91.92 E-value=0.17 Score=47.71 Aligned_cols=42 Identities=7% Similarity=0.018 Sum_probs=32.2
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCC---ChHHHHHHHHHcCCCC
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGD---NKSTAEAICRQIKLFS 666 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd---~~~~a~~ia~~~gi~~ 666 (753)
++=+++.++++.|+++|++++++|.. +........+++|+.-
T Consensus 23 ~~i~~a~e~l~~l~~~g~~~~~~TN~~~~~~~~~~~~~~~~g~~~ 67 (261)
T d1vjra_ 23 SLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 67 (261)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred ccCchHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhhcccc
Confidence 33478999999999999999999854 4555555566778754
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=91.47 E-value=0.024 Score=52.28 Aligned_cols=100 Identities=10% Similarity=0.010 Sum_probs=61.3
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCCh----HHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeE
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNK----STAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKV 700 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~----~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 700 (753)
.+.+++.+.+++|+++|+++.++|+-.. ..........|+...- ..++.++...
T Consensus 97 ~~~~~~~~~L~~L~~~~~~~~i~s~~~~~~~~~~~~~~~~~~~l~~~f----d~i~~s~~~~------------------ 154 (222)
T d1cr6a1 97 SINRPMLQAAIALKKKGFTTCIVTNNWLDDGDKRDSLAQMMCELSQHF----DFLIESCQVG------------------ 154 (222)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCCSSSHHHHHHHHHHHGGGC----SEEEEHHHHS------------------
T ss_pred CCCccHHHHHHHHHhcCCceEEeeccccccHHHHHHHHHHhcChHhhh----ceeeehhhcc------------------
Confidence 3679999999999999999999997432 2233334445543210 0111111110
Q ss_pred EEeeCchhHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc-eEecC
Q 004437 701 FSRAEPRHKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI-GVAMG 746 (753)
Q Consensus 701 ~~~~~p~~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v-giamg 746 (753)
...-.|+--...++.++-..+.++||||..+|+.+=+.||+ +|-+.
T Consensus 155 ~~KP~p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V~ 201 (222)
T d1cr6a1 155 MIKPEPQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILVH 201 (222)
T ss_dssp CCTTCHHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEECC
T ss_pred CCCCChHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEEC
Confidence 00012333345555555557789999999999999999997 44433
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=91.41 E-value=0.067 Score=50.61 Aligned_cols=38 Identities=8% Similarity=0.123 Sum_probs=28.5
Q ss_pred CCCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHH
Q 004437 624 DPPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQ 661 (753)
Q Consensus 624 d~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~ 661 (753)
+.+=+++.++|+.|+++|++++++|.....+...+++.
T Consensus 17 ~~~i~~a~e~l~~l~~~g~~~~~~TN~s~~~~~~~~~~ 54 (253)
T d1wvia_ 17 KDRIPAGEDFVKRLQERQLPYILVTNNTTRTPEMVQEM 54 (253)
T ss_dssp TEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHH
T ss_pred CCcCccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHH
Confidence 33448999999999999999999997655444444443
|
| >d1zd3a1 c.108.1.2 (A:2-224) Epoxide hydrolase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.41 E-value=0.023 Score=52.24 Aligned_cols=92 Identities=11% Similarity=-0.011 Sum_probs=57.5
Q ss_pred CCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHH----HHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEE
Q 004437 626 PRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAIC----RQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVF 701 (753)
Q Consensus 626 ~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia----~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 701 (753)
+.+++.+++..|++.|++++++|........... ...++...- ..++
T Consensus 100 ~~~~~~~~l~~L~~~~~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~f-----------------------------d~i~ 150 (225)
T d1zd3a1 100 INRPMLQAALMLRKKGFTTAILTNTWLDDRAERDGLAQLMCELKMHF-----------------------------DFLI 150 (225)
T ss_dssp ECHHHHHHHHHHHHTTCEEEEEECCCCCCSTTHHHHHHHHHHHHTTS-----------------------------SEEE
T ss_pred CCccHHHHHHHHHhccCccccccccchhhHHHHHHHHhhhcChHhhc-----------------------------cEEE
Confidence 5789999999999999999999976543322221 122221100 1222
Q ss_pred Ee-----eCch--hHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc-eEecC
Q 004437 702 SR-----AEPR--HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI-GVAMG 746 (753)
Q Consensus 702 ~~-----~~p~--~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v-giamg 746 (753)
+. ..|+ -=..+++.+.-....++||||...|+.+-+.||+ +|.+.
T Consensus 151 ~s~~~~~~KP~~~~~~~~~~~~~~~p~e~l~VgD~~~Di~~A~~~G~~ti~v~ 203 (225)
T d1zd3a1 151 ESCQVGMVKPEPQIYKFLLDTLKASPSEVVFLDDIGANLKPARDLGMVTILVQ 203 (225)
T ss_dssp EHHHHTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEECS
T ss_pred eccccccchhHHHHHHHHhhhcccCccceeEEecCHHHHHHHHHcCCEEEEEC
Confidence 21 1122 2234444444445789999999999999999998 55443
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=86.03 E-value=0.42 Score=44.11 Aligned_cols=91 Identities=9% Similarity=0.057 Sum_probs=61.6
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
++.+++.+++++|+ ++.+.++|..+...+....+..|+...- ..++.+++... .
T Consensus 93 ~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~~f----d~v~~s~~~~~--------------------~ 146 (245)
T d1qq5a_ 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSF----DAVISVDAKRV--------------------F 146 (245)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGC----SEEEEGGGGTC--------------------C
T ss_pred ccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccccc----ccccccccccc--------------------c
Confidence 46688999999886 6788999999998888888888875321 11222222210 1
Q ss_pred Cch--hHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc
Q 004437 705 EPR--HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 705 ~p~--~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
.|+ -=...++.+.-..+.+++|||+.+|+.+=+.||+
T Consensus 147 KP~p~~f~~a~~~lg~~p~e~l~VgD~~~di~~A~~aG~ 185 (245)
T d1qq5a_ 147 KPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGF 185 (245)
T ss_dssp TTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTC
T ss_pred CccHHHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHcCC
Confidence 222 1133444454445689999999999999899986
|
| >d2b0ca1 c.108.1.2 (A:8-204) Putative phosphatase YihX {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Putative phosphatase YihX species: Escherichia coli [TaxId: 562]
Probab=84.22 E-value=0.097 Score=46.44 Aligned_cols=93 Identities=12% Similarity=0.165 Sum_probs=57.9
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHc-CCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEe
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQI-KLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSR 703 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 703 (753)
++.+++.+.+..++..|+++.++|+-+...+....... |+.. .. ..+++.
T Consensus 84 ~~~~~~~~l~~~l~~~~~~~~i~t~~~~~~~~~~~~~~~~l~~----------------------------~f-d~v~~s 134 (197)
T d2b0ca1 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEIRD----------------------------AA-DHIYLS 134 (197)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECCCCCTTSCCGGGCHHHHH----------------------------HC-SEEEEH
T ss_pred ccCchhHHHHHHHHhcCCeEEEEeCccHHHHHHHHHHcccchh----------------------------hc-cceeec
Confidence 36789999999999999999999986654432211111 1100 00 122221
Q ss_pred -----eCchhH--HHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc-eEecC
Q 004437 704 -----AEPRHK--QEIVRMLKEMGEVVAMTGDGVNDAPALKLADI-GVAMG 746 (753)
Q Consensus 704 -----~~p~~K--~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v-giamg 746 (753)
..|.-+ ..+++.++-..+.+++|||..+|+.+-+.||+ +|.+.
T Consensus 135 ~~~~~~Kp~~~~~~~~~~~~~~~~~~~l~vgDs~~di~~A~~aG~~ti~v~ 185 (197)
T d2b0ca1 135 QDLGMRKPEARIYQHVLQAEGFSPSDTVFFDDNADNIEGANQLGITSILVK 185 (197)
T ss_dssp HHHTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEECC
T ss_pred ccccccccchHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHcCCEEEEEC
Confidence 122222 23344444345789999999999999999997 66554
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=82.99 E-value=0.75 Score=41.56 Aligned_cols=93 Identities=13% Similarity=0.130 Sum_probs=59.6
Q ss_pred CCCchhHHHHHHHHhCCCeEEEEcCCChHHHHHHHHHcCCCCCCCccccccccchhhhccCHHHHHHHHHhcCCeEEEee
Q 004437 625 PPRGGVDKAIDDCRGAGIEVMVITGDNKSTAEAICRQIKLFSGNEDLTGRSFTGKEFMALSSTQQIEALSKHGGKVFSRA 704 (753)
Q Consensus 625 ~~r~~~~~~i~~l~~~gi~v~i~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 704 (753)
.+.+++.+.+++|+. +..++|+-....+..+.+.+|+...-.. .+..++.... .+.
T Consensus 85 ~~~~g~~~~L~~l~~---~~~i~t~~~~~~~~~~l~~~~l~~~f~~---~~~~~~~~~~------------------~~~ 140 (222)
T d2fdra1 85 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAP---HIYSAKDLGA------------------DRV 140 (222)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTT---CEEEHHHHCT------------------TCC
T ss_pred chhhhHHHHhhhccc---cceeeeecchhhhhhhhcccccccccce---eecccccccc------------------ccc
Confidence 367888888877754 5578999999999999999999642210 1111111000 011
Q ss_pred Cch--hHHHHHHHHHHcCCeEEEEcCCcccHHHhhhcCc
Q 004437 705 EPR--HKQEIVRMLKEMGEVVAMTGDGVNDAPALKLADI 741 (753)
Q Consensus 705 ~p~--~K~~~v~~l~~~~~~v~~~GDg~ND~~~l~~A~v 741 (753)
.|+ .=....+.+.-..+.+++|||+.+|+.+=+.||+
T Consensus 141 KP~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~ 179 (222)
T d2fdra1 141 KPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGM 179 (222)
T ss_dssp TTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTC
T ss_pred ccCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCC
Confidence 222 2233444444445789999999999999999996
|