Citrus Sinensis ID: 004444
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 753 | 2.2.26 [Sep-21-2011] | |||||||
| P36183 | 809 | Endoplasmin homolog OS=Ho | N/A | no | 0.840 | 0.782 | 0.458 | 1e-165 | |
| P24724 | 721 | Heat shock protein 90 OS= | yes | no | 0.852 | 0.890 | 0.459 | 1e-164 | |
| Q9STX5 | 823 | Endoplasmin homolog OS=Ar | no | no | 0.847 | 0.775 | 0.463 | 1e-162 | |
| Q90474 | 725 | Heat shock protein HSP 90 | yes | no | 0.843 | 0.875 | 0.449 | 1e-160 | |
| Q4UDU8 | 722 | Heat shock protein 90 OS= | yes | no | 0.849 | 0.886 | 0.455 | 1e-160 | |
| Q66HD0 | 804 | Endoplasmin OS=Rattus nor | yes | no | 0.844 | 0.791 | 0.439 | 1e-157 | |
| P35016 | 817 | Endoplasmin homolog OS=Ca | N/A | no | 0.859 | 0.791 | 0.444 | 1e-157 | |
| P54651 | 700 | Heat shock cognate 90 kDa | yes | no | 0.836 | 0.9 | 0.457 | 1e-157 | |
| P02828 | 717 | Heat shock protein 83 OS= | yes | no | 0.849 | 0.892 | 0.441 | 1e-157 | |
| P30946 | 694 | Heat shock protein HSP 90 | yes | no | 0.827 | 0.897 | 0.438 | 1e-157 |
| >sp|P36183|ENPL_HORVU Endoplasmin homolog OS=Hordeum vulgare PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 581 bits (1497), Expect = e-165, Method: Compositional matrix adjust.
Identities = 315/687 (45%), Positives = 453/687 (65%), Gaps = 54/687 (7%)
Query: 96 EKYEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRYLGVTEPELLK--DAVD 153
EK+E+QAEVSRLMD+I+NSLYSNK++FLRELISNASDALDK+R+L +T+ E++ D
Sbjct: 78 EKFEFQAEVSRLMDIIINSLYSNKDIFLRELISNASDALDKIRFLALTDKEVMGEGDTAK 137
Query: 154 LDIRIQTDKDNGIITITDSGIGMTQQDLVDCLGTIAQSGTAKFLKAMKDSKDAGGDSNLI 213
L+I+I+ DK+N I++I D G+GMT++DL+ LGTIA+SGT+ F++ M+ GGD NLI
Sbjct: 138 LEIQIKLDKENKILSIRDRGVGMTKEDLIKNLGTIAKSGTSAFVEKMQ----TGGDLNLI 193
Query: 214 GQFGVGFYSAFLVSDRVVVETKSPKSDKQYVWEGEANASSYTIREETNPEKLLPRGTRLT 273
GQFGVGFYS +LV+D V V +K DKQYVWE +A+ S + I E+T E L RGT +
Sbjct: 194 GQFGVGFYSVYLVADYVEVVSKH-NDDKQYVWESKADGS-FAISEDTWNEPL-GRGTEIK 250
Query: 274 LYLKHDDKGFAHPERIQKLVKNYSQFVSFPIYTWQEKGYTKEVEVDEDPAETNKDKQDET 333
L+L+ + K + +++ LVK YS+F++FPIY W TKEV+V E PA+ + ++E
Sbjct: 251 LHLRDEAKEYLEEGKLKDLVKKYSEFINFPIYLWA----TKEVDV-EVPADEEESNEEEE 305
Query: 334 AEKKKKTKTVVERYWD--------------WELTNETQPIWLRNPKEVTTEEYNEFYKKT 379
+ + + E + WEL N+ + +WLR+PKEVT EEY +FY
Sbjct: 306 STTETTEEEETEDDEEKKPKTKTVKETTTEWELLNDMKAVWLRSPKEVTEEEYAKFYHSL 365
Query: 380 FNEYLD--PLASSHFTTEGEVEFRSILYVPAVAPMG-KDDLINPKTKNIRLYVKRVFISD 436
++ D P++ SHF+ EG+VEF+++L+VP AP + N N++LYV+RVFISD
Sbjct: 366 AKDFGDDKPMSWSHFSAEGDVEFKALLFVPPKAPHDLYESYYNANKSNLKLYVRRVFISD 425
Query: 437 DFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGIS--- 493
+FD +L P+YLSF+ G+VDS+ LPLNVSRE+LQ+ ++ ++K+L+RKA DMI ++
Sbjct: 426 EFD-DLLPKYLSFLMGIVDSDTLPLNVSREMLQQHSSLKTIKKKLIRKALDMIRKLAEED 484
Query: 494 ----------------MSENRADYEKFWENFGKYLKMGCIDDRENHKPLAPLLRFFSSQS 537
M E + Y KFW FGK +K+G I+D N LA LLRF SS+S
Sbjct: 485 PDEYSNKEKTDDEKSAMEEKKGQYAKFWNEFGKSVKLGIIEDATNRNRLAKLLRFESSKS 544
Query: 538 EDEMISLDEYVENMKPEQKDIYFIAADSVASARNTPFLEKLLEKDLEVLYLVDPIDEIAV 597
+ +++SLDEY+ MK QKDI+++ S +PFLE+L +K+ EV+Y DP+DE +
Sbjct: 545 DGKLVSLDEYISRMKSGQKDIFYLTGSSKEQLEKSPFLEQLTKKNYEVIYFTDPVDEYLM 604
Query: 598 QNLKSYKEKNFVDISKEDLDLGEKNEEKEKVMKEEFGQTCDWIKKRLG-DKVASVQISNR 656
Q L Y++K F ++SKE L LG+ + K K +KE F + DW KK L + + SV+ISNR
Sbjct: 605 QYLMDYEDKKFQNVSKEGLKLGK--DSKLKDLKESFKELTDWWKKALDTEGIDSVKISNR 662
Query: 657 LSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASK 716
L ++PCV+V++K+GWS+NME++M+AQT+ D S +MRG+RV EINP HPII+ L
Sbjct: 663 LHNTPCVVVTSKYGWSSNMEKIMQAQTLSDASKQAYMRGKRVLEINPRHPIIKELRDKVA 722
Query: 717 NCPDDNDALRVVDLLYDAALVSSGFTV 743
D + L+Y AL+ SGF +
Sbjct: 723 QDSDSEGLKQTARLVYQTALMESGFNL 749
|
May have a molecular chaperone role in the processing of secreted materials. Hordeum vulgare (taxid: 4513) |
| >sp|P24724|HSP90_THEPA Heat shock protein 90 OS=Theileria parva GN=TP02_0244 PE=2 SV=2 | Back alignment and function description |
|---|
| >sp|Q9STX5|ENPL_ARATH Endoplasmin homolog OS=Arabidopsis thaliana GN=SHD PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|Q90474|H90A1_DANRE Heat shock protein HSP 90-alpha 1 OS=Danio rerio GN=hsp90a.1 PE=1 SV=3 | Back alignment and function description |
|---|
| >sp|Q4UDU8|HSP90_THEAN Heat shock protein 90 OS=Theileria annulata GN=TA12105 PE=3 SV=1 | Back alignment and function description |
|---|
| >sp|Q66HD0|ENPL_RAT Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2 | Back alignment and function description |
|---|
| >sp|P35016|ENPL_CATRO Endoplasmin homolog OS=Catharanthus roseus GN=HSP90 PE=2 SV=1 | Back alignment and function description |
|---|
| >sp|P54651|HSC90_DICDI Heat shock cognate 90 kDa protein OS=Dictyostelium discoideum GN=hspD PE=1 SV=2 | Back alignment and function description |
|---|
| >sp|P02828|HSP83_DROME Heat shock protein 83 OS=Drosophila melanogaster GN=Hsp83 PE=1 SV=1 | Back alignment and function description |
|---|
| >sp|P30946|HS90A_RABIT Heat shock protein HSP 90-alpha OS=Oryctolagus cuniculus GN=HSP90AA1 PE=1 SV=2 | Back alignment and function description |
|---|
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 753 | ||||||
| 255581792 | 799 | heat shock protein, putative [Ricinus co | 0.981 | 0.924 | 0.833 | 0.0 | |
| 359485756 | 793 | PREDICTED: endoplasmin homolog [Vitis vi | 0.977 | 0.928 | 0.840 | 0.0 | |
| 296085007 | 871 | unnamed protein product [Vitis vinifera] | 0.977 | 0.845 | 0.832 | 0.0 | |
| 357495325 | 792 | Heat-shock protein [Medicago truncatula] | 0.974 | 0.926 | 0.815 | 0.0 | |
| 357495327 | 797 | Heat-shock protein [Medicago truncatula] | 0.974 | 0.920 | 0.810 | 0.0 | |
| 449525085 | 791 | PREDICTED: endoplasmin homolog [Cucumis | 0.980 | 0.932 | 0.804 | 0.0 | |
| 449444490 | 791 | PREDICTED: endoplasmin homolog [Cucumis | 0.980 | 0.932 | 0.804 | 0.0 | |
| 356501703 | 791 | PREDICTED: heat shock protein 90-like [G | 0.952 | 0.906 | 0.826 | 0.0 | |
| 145338243 | 799 | HEAT SHOCK PROTEIN 89.1 [Arabidopsis tha | 0.982 | 0.926 | 0.787 | 0.0 | |
| 110736416 | 799 | putative heat shock protein [Arabidopsis | 0.982 | 0.926 | 0.787 | 0.0 |
| >gi|255581792|ref|XP_002531697.1| heat shock protein, putative [Ricinus communis] gi|223528673|gb|EEF30688.1| heat shock protein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1263 bits (3267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/743 (83%), Positives = 689/743 (92%), Gaps = 4/743 (0%)
Query: 1 MYRLGRRSASALLRHDGARYNIHAIATPIFSATCSGDSVVETDAKTRWYSVLASGRCNTS 60
M+RL RRS SA+LR G+RY A ++P+ ++ D+ V++D K RWYSVL +G+ +
Sbjct: 1 MHRLSRRSVSAILRTGGSRYRTLA-SSPLSFSSHFPDTAVDSDYKVRWYSVLTNGKTIPN 59
Query: 61 QSSAALNLNKNGFFLGNRYESTAA-FDASSPPPPPLEKYEYQAEVSRLMDLIVNSLYSNK 119
++ + +L+ GF+LG+RYESTAA DASSPPPP EKYEYQAEVSRLMDLIVNSLYSNK
Sbjct: 60 KAGPSAHLS--GFYLGSRYESTAAESDASSPPPPVGEKYEYQAEVSRLMDLIVNSLYSNK 117
Query: 120 EVFLRELISNASDALDKLRYLGVTEPELLKDAVDLDIRIQTDKDNGIITITDSGIGMTQQ 179
EVFLRELISNASDALDKLR+LGVTEPELLKDA DLDIRIQTDKDNGI+TI DSGIGMT+Q
Sbjct: 118 EVFLRELISNASDALDKLRFLGVTEPELLKDAADLDIRIQTDKDNGIVTIIDSGIGMTRQ 177
Query: 180 DLVDCLGTIAQSGTAKFLKAMKDSKDAGGDSNLIGQFGVGFYSAFLVSDRVVVETKSPKS 239
+L+DCLGTIAQSGTAKFLKA+K+SKDAG D+NLIGQFGVGFYSAFLVS+RVVV TKSPKS
Sbjct: 178 ELIDCLGTIAQSGTAKFLKALKESKDAGADNNLIGQFGVGFYSAFLVSERVVVSTKSPKS 237
Query: 240 DKQYVWEGEANASSYTIREETNPEKLLPRGTRLTLYLKHDDKGFAHPERIQKLVKNYSQF 299
DKQYVWEGEANASSY IREET+PEKL+PRGTRLTLYLK DDKGFA PERIQKLVKNYSQF
Sbjct: 238 DKQYVWEGEANASSYVIREETDPEKLIPRGTRLTLYLKRDDKGFADPERIQKLVKNYSQF 297
Query: 300 VSFPIYTWQEKGYTKEVEVDEDPAETNKDKQDETAEKKKKTKTVVERYWDWELTNETQPI 359
VSFPIYTWQEKG TKEVE+DE+P E NK +QDE AEKKKKTKTVVERYWDWELTNETQP+
Sbjct: 298 VSFPIYTWQEKGLTKEVEIDEEPTEANKGEQDEKAEKKKKTKTVVERYWDWELTNETQPL 357
Query: 360 WLRNPKEVTTEEYNEFYKKTFNEYLDPLASSHFTTEGEVEFRSILYVPAVAPMGKDDLIN 419
WLR+PKEV+TEEYNEFYKKTFNEYL+PLASSHFTTEGEVEFRS+L+VPA AP GKDD++N
Sbjct: 358 WLRSPKEVSTEEYNEFYKKTFNEYLEPLASSHFTTEGEVEFRSVLFVPAAAPTGKDDIVN 417
Query: 420 PKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRK 479
PKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRK
Sbjct: 418 PKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRK 477
Query: 480 RLVRKAFDMILGISMSENRADYEKFWENFGKYLKMGCIDDRENHKPLAPLLRFFSSQSED 539
RLVRKAFDMILGISMSE+R DYEKFW+N+GKY+K+GCI+DRENHK +APLLRFFSSQS++
Sbjct: 478 RLVRKAFDMILGISMSEDREDYEKFWDNYGKYMKLGCIEDRENHKRIAPLLRFFSSQSDE 537
Query: 540 EMISLDEYVENMKPEQKDIYFIAADSVASARNTPFLEKLLEKDLEVLYLVDPIDEIAVQN 599
EMISLDEYVENMKP+QKDIY+IA+DSV SA+NTPFLE+L+EKDLEVL+LVDPIDE+AVQN
Sbjct: 538 EMISLDEYVENMKPDQKDIYYIASDSVTSAKNTPFLERLVEKDLEVLFLVDPIDEVAVQN 597
Query: 600 LKSYKEKNFVDISKEDLDLGEKNEEKEKVMKEEFGQTCDWIKKRLGDKVASVQISNRLSS 659
LKSYKEKNFVDISKEDLDLG+KNEEKEKVMK+EFGQTCDWIKKRLGDKVASVQISNRLSS
Sbjct: 598 LKSYKEKNFVDISKEDLDLGDKNEEKEKVMKQEFGQTCDWIKKRLGDKVASVQISNRLSS 657
Query: 660 SPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCP 719
SPCVLVS KFGWSANMERLMK+QT+GDTSS+EFMRGRRVFEINPEH II++LN A + P
Sbjct: 658 SPCVLVSGKFGWSANMERLMKSQTIGDTSSLEFMRGRRVFEINPEHAIIKSLNEACRASP 717
Query: 720 DDNDALRVVDLLYDAALVSSGFT 742
DD DAL+ +DLLYDAALVSSGFT
Sbjct: 718 DDEDALKAIDLLYDAALVSSGFT 740
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359485756|ref|XP_002270014.2| PREDICTED: endoplasmin homolog [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|296085007|emb|CBI28422.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|357495325|ref|XP_003617951.1| Heat-shock protein [Medicago truncatula] gi|355519286|gb|AET00910.1| Heat-shock protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|357495327|ref|XP_003617952.1| Heat-shock protein [Medicago truncatula] gi|355519287|gb|AET00911.1| Heat-shock protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|449525085|ref|XP_004169550.1| PREDICTED: endoplasmin homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|449444490|ref|XP_004140007.1| PREDICTED: endoplasmin homolog [Cucumis sativus] | Back alignment and taxonomy information |
|---|
| >gi|356501703|ref|XP_003519663.1| PREDICTED: heat shock protein 90-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|145338243|ref|NP_187434.2| HEAT SHOCK PROTEIN 89.1 [Arabidopsis thaliana] gi|332641081|gb|AEE74602.1| HEAT SHOCK PROTEIN 89.1 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|110736416|dbj|BAF00175.1| putative heat shock protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 753 | ||||||
| TAIR|locus:2077352 | 799 | Hsp89.1 "HEAT SHOCK PROTEIN 89 | 0.958 | 0.903 | 0.733 | 1.1e-284 | |
| TAIR|locus:2049651 | 780 | CR88 [Arabidopsis thaliana (ta | 0.855 | 0.825 | 0.683 | 1.2e-241 | |
| TAIR|locus:2135887 | 823 | SHD "SHEPHERD" [Arabidopsis th | 0.536 | 0.490 | 0.467 | 2.3e-146 | |
| ZFIN|ZDB-GENE-031001-3 | 734 | hsp90aa1.2 "heat shock protein | 0.520 | 0.534 | 0.437 | 1.1e-142 | |
| MGI|MGI:98817 | 802 | Hsp90b1 "heat shock protein 90 | 0.857 | 0.805 | 0.428 | 1.5e-138 | |
| UNIPROTKB|P14625 | 803 | HSP90B1 "Endoplasmin" [Homo sa | 0.857 | 0.804 | 0.426 | 1.9e-138 | |
| UNIPROTKB|Q4R520 | 804 | HSP90B1 "Endoplasmin" [Macaca | 0.857 | 0.803 | 0.426 | 1.9e-138 | |
| UNIPROTKB|F1NC33 | 725 | HSP90AB1 "Heat shock cognate p | 0.843 | 0.875 | 0.436 | 3.1e-138 | |
| UNIPROTKB|F1NDI7 | 727 | HSP90AB1 "Heat shock cognate p | 0.843 | 0.873 | 0.436 | 3.1e-138 | |
| RGD|1310482 | 804 | Hsp90b1 "heat shock protein 90 | 0.857 | 0.803 | 0.425 | 3.1e-138 |
| TAIR|locus:2077352 Hsp89.1 "HEAT SHOCK PROTEIN 89.1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2735 (967.8 bits), Expect = 1.1e-284, P = 1.1e-284
Identities = 530/723 (73%), Positives = 596/723 (82%)
Query: 20 YNIHAIATPIFSATCSGDSVVETDAKTRWYSVLASGRCNTSQSSAAXXXXXXXXXXXXRY 79
+ I A A+ S+ + D V +D ++RWYS L +G+ S S A
Sbjct: 20 FRIAAAASTSRSSPSATD-VKRSDTESRWYSSLTNGQSKNSGSFAQLNMKTNWFMGYRNE 78
Query: 80 ESTAAFDAXXXXXXXLEKYEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRY 139
S AA D+ EK+EYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRY
Sbjct: 79 SSAAASDSSSQAPPPAEKFEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRY 138
Query: 140 LGVTEPELLKDAVDLDIRIQTDKDNGIITITDSGIGMTQQDLVDCLGTIAQSGTAKFLKA 199
L VT PEL KDA DLDIRI DK+NGIIT+TDSGIGMT+Q+LVDCLGTIAQSGTAKF+KA
Sbjct: 139 LSVTNPELSKDAPDLDIRIYADKENGIITLTDSGIGMTRQELVDCLGTIAQSGTAKFMKA 198
Query: 200 MKDSKDAGGDSNLIGQFGVGFYSAFLVSDRVVVETKSPKSDKQYVWEGEANASSYTIREE 259
+KDSKDAGGD+NLIGQFGVGFYSAFLV+DRV+V TKSPKSDKQYVWEGEAN+SS+TI+E+
Sbjct: 199 LKDSKDAGGDNNLIGQFGVGFYSAFLVADRVIVSTKSPKSDKQYVWEGEANSSSFTIQED 258
Query: 260 TNPEKLLPRGTRLTLYLKHDDKGFAHPERIQKLVKNYSQFVSFPIYTWQEKGYTKEVEVD 319
T+P+ L+PRGTR+TL+LK + K FA PERIQKLVKNYSQFVSFPIYTWQEKGYTKEVEV+
Sbjct: 259 TDPQSLIPRGTRITLHLKQEAKNFADPERIQKLVKNYSQFVSFPIYTWQEKGYTKEVEVE 318
Query: 320 EDPAETNXXXXXXXXXXXXXXXXXXXRYWDWELTNETQPIWLRNPKEVTTEEYNEFYKKT 379
+DP ET RYWDWELTNETQPIWLRNPKEVTT EYNEFY+K
Sbjct: 319 DDPTETKKDDQDDQTEKKKKTKKVVERYWDWELTNETQPIWLRNPKEVTTAEYNEFYRKA 378
Query: 380 FNEYLDPLASSHFTTEGEVEFRSILYVPAVAPMGKDDLINPKTKNIRLYVKRVFISDDFD 439
FNEYLDPLASSHFTTEGEVEFRSILYVP V+P GKDD++N KTKNIRLYVKRVFISDDFD
Sbjct: 379 FNEYLDPLASSHFTTEGEVEFRSILYVPPVSPSGKDDIVNQKTKNIRLYVKRVFISDDFD 438
Query: 440 GELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGISMSENRA 499
GELFPRYLSFVKGVVDS+DLPLNVSREILQESRIVRIM+KRLVRKAFDMILGIS+SENR
Sbjct: 439 GELFPRYLSFVKGVVDSHDLPLNVSREILQESRIVRIMKKRLVRKAFDMILGISLSENRE 498
Query: 500 DYEKFWENFGKYLKMGCIDDRENHKPLAPLLRFFSSQSEDEMISLDEYVENMKPEQKDIY 559
DYEKFW+NFGK+LK+GCI+DRENHK +APLLRFFSSQSE++MISLDEYVENMKPEQK IY
Sbjct: 499 DYEKFWDNFGKHLKLGCIEDRENHKRIAPLLRFFSSQSENDMISLDEYVENMKPEQKAIY 558
Query: 560 FIAADSVASARNTPFXXXXXXXXXXXXXXXXPIDEIAVQNLKSYKEKNFVDISKEDLDLG 619
FIA+DS+ SA+N PF PIDE+AVQ+LK+YKEK+FVDISKEDLDLG
Sbjct: 559 FIASDSITSAKNAPFLEKMLEKGLEVLYLVEPIDEVAVQSLKAYKEKDFVDISKEDLDLG 618
Query: 620 XXXXXXXXXXXXXFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLM 679
FGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVS KFGWSANMERLM
Sbjct: 619 DKNEEKEAAVKKEFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSGKFGWSANMERLM 678
Query: 680 KAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSS 739
KAQ+ GDT S+++M+GRRVFEINP+H II+N+NAA + P+D DA+R +DL+YDAALVSS
Sbjct: 679 KAQSTGDTISLDYMKGRRVFEINPDHSIIKNINAAYNSNPNDEDAMRAIDLMYDAALVSS 738
Query: 740 GFT 742
GFT
Sbjct: 739 GFT 741
|
|
| TAIR|locus:2049651 CR88 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2135887 SHD "SHEPHERD" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-031001-3 hsp90aa1.2 "heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:98817 Hsp90b1 "heat shock protein 90, beta (Grp94), member 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P14625 HSP90B1 "Endoplasmin" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q4R520 HSP90B1 "Endoplasmin" [Macaca fascicularis (taxid:9541)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NC33 HSP90AB1 "Heat shock cognate protein HSP 90-beta" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NDI7 HSP90AB1 "Heat shock cognate protein HSP 90-beta" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| RGD|1310482 Hsp90b1 "heat shock protein 90, beta, member 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| P24724 | HSP90_THEPA | No assigned EC number | 0.4599 | 0.8525 | 0.8904 | yes | no |
| P41887 | HSP90_SCHPO | No assigned EC number | 0.4576 | 0.8565 | 0.9161 | yes | no |
| Q29092 | ENPL_PIG | No assigned EC number | 0.4417 | 0.8579 | 0.8034 | yes | no |
| Q7PT10 | HSP83_ANOGA | No assigned EC number | 0.4485 | 0.8499 | 0.8888 | yes | no |
| Q25293 | HSP83_LEIIN | No assigned EC number | 0.4449 | 0.8539 | 0.9172 | yes | no |
| Q5R6F7 | ENPL_PONAB | No assigned EC number | 0.4417 | 0.8579 | 0.8034 | yes | no |
| Q4UDU8 | HSP90_THEAN | No assigned EC number | 0.4550 | 0.8499 | 0.8864 | yes | no |
| Q95M18 | ENPL_BOVIN | No assigned EC number | 0.4582 | 0.8579 | 0.8034 | yes | no |
| O43109 | HSP90_PODAS | No assigned EC number | 0.4427 | 0.8539 | 0.9172 | yes | no |
| P14625 | ENPL_HUMAN | No assigned EC number | 0.4432 | 0.8579 | 0.8044 | yes | no |
| Q90474 | H90A1_DANRE | No assigned EC number | 0.4494 | 0.8432 | 0.8758 | yes | no |
| P02828 | HSP83_DROME | No assigned EC number | 0.4410 | 0.8499 | 0.8926 | yes | no |
| P54651 | HSC90_DICDI | No assigned EC number | 0.4574 | 0.8366 | 0.9 | yes | no |
| P08113 | ENPL_MOUSE | No assigned EC number | 0.4492 | 0.8579 | 0.8054 | yes | no |
| Q04619 | HS90B_CHICK | No assigned EC number | 0.4503 | 0.8446 | 0.8772 | yes | no |
| P04809 | HSP83_DROPS | No assigned EC number | 0.4395 | 0.8499 | 0.8926 | yes | no |
| P30946 | HS90A_RABIT | No assigned EC number | 0.4386 | 0.8273 | 0.8976 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
 |
 |
 |
 |
 |
 |
 |
 |
 |
|||
 | AT3G07770 | ATP binding; ATP binding; FUNCTIONS IN- ATP binding; INVOLVED IN- protein folding; LOCATED IN- mitochondrion, cell wall; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 14 growth stages; CONTAINS InterPro DOMAIN/s- Heat shock protein Hsp90 (InterPro-IPR001404), ATP-binding region, ATPase-like (InterPro-IPR003594); BEST Arabidopsis thaliana protein match is- CR88; ATP binding (TAIR-AT2G04030.1); Has 6443 Blast hits to 6394 proteins in 1668 species- Archae - 4; Bacteria - 2076; Metazoa - 1344; Fungi - 254; Plants - 279; Viruses - 0; Other Eukaryotes - 2486 (source- NCBI BLink). (799 aa) | |||||||||
(Arabidopsis thaliana) | |||||||||||
 | HSP60 | • | • | 0.939 | |||||||
 | HSP60-3A | • | • | 0.890 | |||||||
 | AT1G80270 | • | 0.837 | ||||||||
 | MTHSC70-2 | • | • | 0.828 | |||||||
 | AT3G06530 | • | 0.804 | ||||||||
 | AT2G40360 | • | 0.794 | ||||||||
 | AT4G25340 | • | 0.788 | ||||||||
 | NOP56 | • | 0.788 | ||||||||
 | AT4G25730 | • | 0.778 | ||||||||
 | CR88 | • | • | • | • | 0.776 |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 753 | |||
| PRK05218 | 613 | PRK05218, PRK05218, heat shock protein 90; Provisi | 0.0 | |
| COG0326 | 623 | COG0326, HtpG, Molecular chaperone, HSP90 family [ | 0.0 | |
| PTZ00272 | 701 | PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp | 0.0 | |
| pfam00183 | 529 | pfam00183, HSP90, Hsp90 protein | 0.0 | |
| PTZ00130 | 814 | PTZ00130, PTZ00130, heat shock protein 90; Provisi | 1e-167 | |
| PRK14083 | 601 | PRK14083, PRK14083, HSP90 family protein; Provisio | 4e-37 | |
| pfam13589 | 134 | pfam13589, HATPase_c_3, Histidine kinase-, DNA gyr | 2e-09 | |
| cd00075 | 103 | cd00075, HATPase_c, Histidine kinase-like ATPases; | 6e-09 | |
| pfam02518 | 111 | pfam02518, HATPase_c, Histidine kinase-, DNA gyras | 3e-07 | |
| smart00387 | 111 | smart00387, HATPase_c, Histidine kinase-like ATPas | 8e-07 |
| >gnl|CDD|235366 PRK05218, PRK05218, heat shock protein 90; Provisional | Back alignment and domain information |
|---|
Score = 699 bits (1807), Expect = 0.0
Identities = 280/657 (42%), Positives = 394/657 (59%), Gaps = 73/657 (11%)
Query: 96 EKYEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRYLGVTEPELLKDAVDLD 155
E E+QAEV +L+ L+++SLYSNKE+FLRELISNASDA+DKLR+ +T+P L + DL
Sbjct: 4 ETGEFQAEVKQLLHLMIHSLYSNKEIFLRELISNASDAIDKLRFEALTDPALYEGDGDLK 63
Query: 156 IRIQTDKDNGIITITDSGIGMTQQDLVDCLGTIAQSGTAKFLKAMKDSKDAGGDSNLIGQ 215
IRI DK+ +TI+D+GIGMT++++++ LGTIA+SGT +FL+ +K D DS LIGQ
Sbjct: 64 IRISFDKEARTLTISDNGIGMTREEVIENLGTIAKSGTKEFLEKLKG--DQKKDSQLIGQ 121
Query: 216 FGVGFYSAFLVSDRVVVETKSPKSDKQ-YVWE--GEANASSYTIREETNPEKLLPRGTRL 272
FGVGFYSAF+V+D+V V T+S + WE GE YTI E E RGT +
Sbjct: 122 FGVGFYSAFMVADKVTVITRSAGPAAEAVRWESDGEG---EYTIEEIEKEE----RGTEI 174
Query: 273 TLYLKHDDKGFAHPERIQKLVKNYSQFVSFPIYTWQEKGYTKEVEVDEDPAETNKDKQDE 332
TL+LK D+ F RI+ ++K YS F+ PI
Sbjct: 175 TLHLKEDEDEFLDEWRIRSIIKKYSDFIPVPIKL-------------------------- 208
Query: 333 TAEKKKKTKTVVERYWDWELTNETQPIWLRNPKEVTTEEYNEFYKKTFNEYLDPLASSHF 392
+K++ +T+ N +W R+ E+T EEY EFYK +++ DPL H
Sbjct: 209 ---EKEEEETI----------NSASALWTRSKSEITDEEYKEFYKHLAHDFDDPLFWIHN 255
Query: 393 TTEGEVEFRSILYVPAVAPMGKDDLINPKTKN-IRLYVKRVFISDDFDGELFPRYLSFVK 451
EG E+ +LY+P AP DL N K ++LYVKRVFI DD + EL P YL FVK
Sbjct: 256 NVEGPFEYTGLLYIPKKAPF---DLFNRDRKGGLKLYVKRVFIMDDAE-ELLPEYLRFVK 311
Query: 452 GVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGISMSEN-RADYEKFWENFGK 510
GV+DS DLPLNVSREILQE R+V+ +RK + +K D + +++N R YEKFW+ FG
Sbjct: 312 GVIDSEDLPLNVSREILQEDRVVKKIRKAITKKVLDEL--EKLAKNDREKYEKFWKEFGP 369
Query: 511 YLKMGCIDDRENHKPLAPLLRFFSSQSEDEMISLDEYVENMKPEQKDIYFIAADSVASAR 570
LK G +D N + LA LLRF S+ E + +SL EYVE MK QK IY+I DS +A+
Sbjct: 370 VLKEGLYEDFANREKLAKLLRFAST-HEGKYVSLAEYVERMKEGQKKIYYITGDSREAAK 428
Query: 571 NTPFLEKLLEKDLEVLYLVDPIDEIAVQNLKSYKEKNFVDISKEDLDLG---EKNEEKEK 627
N+P LE +K +EVL L DPIDE + L+ + K F +++ DLDLG E+ +E+++
Sbjct: 429 NSPHLELFKKKGIEVLLLTDPIDEFWISYLEEFDGKPFKSVARGDLDLGKEDEEEKEEKE 488
Query: 628 VMKEEFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDT 687
+EEF + +K+ LGDKV V++S+RL+ SP LV+ + S ME+L+KA
Sbjct: 489 EAEEEFKPLLERLKEALGDKVKDVRLSHRLTDSPACLVADEGDMSTQMEKLLKAA----- 543
Query: 688 SSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALRVVDLLYDAALVSSGFTVK 744
E + + EINP HP+++ L + D+ + +LLYD AL++ G +++
Sbjct: 544 -GQEVPESKPILEINPNHPLVKKL----ADEADEAKFKDLAELLYDQALLAEGGSLE 595
|
Length = 613 |
| >gnl|CDD|223403 COG0326, HtpG, Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >gnl|CDD|240341 PTZ00272, PTZ00272, heat shock protein 83 kDa (Hsp83); Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|215774 pfam00183, HSP90, Hsp90 protein | Back alignment and domain information |
|---|
| >gnl|CDD|185466 PTZ00130, PTZ00130, heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237603 PRK14083, PRK14083, HSP90 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|222246 pfam13589, HATPase_c_3, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | Back alignment and domain information |
|---|
| >gnl|CDD|238030 cd00075, HATPase_c, Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins | Back alignment and domain information |
|---|
| >gnl|CDD|217081 pfam02518, HATPase_c, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | Back alignment and domain information |
|---|
| >gnl|CDD|214643 smart00387, HATPase_c, Histidine kinase-like ATPases | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 753 | |||
| KOG0020 | 785 | consensus Endoplasmic reticulum glucose-regulated | 100.0 | |
| PTZ00272 | 701 | heat shock protein 83 kDa (Hsp83); Provisional | 100.0 | |
| PTZ00130 | 814 | heat shock protein 90; Provisional | 100.0 | |
| COG0326 | 623 | HtpG Molecular chaperone, HSP90 family [Posttransl | 100.0 | |
| KOG0019 | 656 | consensus Molecular chaperone (HSP90 family) [Post | 100.0 | |
| PRK05218 | 613 | heat shock protein 90; Provisional | 100.0 | |
| PRK14083 | 601 | HSP90 family protein; Provisional | 100.0 | |
| PF00183 | 531 | HSP90: Hsp90 protein; InterPro: IPR001404 Molecula | 100.0 | |
| PF13589 | 137 | HATPase_c_3: Histidine kinase-, DNA gyrase B-, and | 99.68 | |
| TIGR00585 | 312 | mutl DNA mismatch repair protein MutL. All protein | 99.41 | |
| COG1389 | 538 | DNA topoisomerase VI, subunit B [DNA replication, | 99.24 | |
| PRK00095 | 617 | mutL DNA mismatch repair protein; Reviewed | 99.08 | |
| PRK04184 | 535 | DNA topoisomerase VI subunit B; Validated | 99.02 | |
| TIGR01052 | 488 | top6b DNA topoisomerase VI, B subunit. This model | 98.92 | |
| PRK14868 | 795 | DNA topoisomerase VI subunit B; Provisional | 98.83 | |
| COG0323 | 638 | MutL DNA mismatch repair enzyme (predicted ATPase) | 98.7 | |
| PRK14867 | 659 | DNA topoisomerase VI subunit B; Provisional | 98.33 | |
| PF02518 | 111 | HATPase_c: Histidine kinase-, DNA gyrase B-, and H | 98.27 | |
| PRK05559 | 631 | DNA topoisomerase IV subunit B; Reviewed | 98.24 | |
| smart00433 | 594 | TOP2c TopoisomeraseII. Eukaryotic DNA topoisomeras | 98.15 | |
| TIGR01055 | 625 | parE_Gneg DNA topoisomerase IV, B subunit, proteob | 98.02 | |
| TIGR01059 | 654 | gyrB DNA gyrase, B subunit. This model describes t | 97.91 | |
| PRK05644 | 638 | gyrB DNA gyrase subunit B; Validated | 97.89 | |
| PRK14939 | 756 | gyrB DNA gyrase subunit B; Provisional | 97.71 | |
| KOG1978 | 672 | consensus DNA mismatch repair protein - MLH2/PMS1/ | 97.64 | |
| KOG1979 | 694 | consensus DNA mismatch repair protein - MLH1 famil | 97.37 | |
| KOG1977 | 1142 | consensus DNA mismatch repair protein - MLH3 famil | 97.12 | |
| cd00075 | 103 | HATPase_c Histidine kinase-like ATPases; This fami | 97.03 | |
| PRK10755 | 356 | sensor protein BasS/PmrB; Provisional | 96.85 | |
| PRK10604 | 433 | sensor protein RstB; Provisional | 96.67 | |
| PRK09470 | 461 | cpxA two-component sensor protein; Provisional | 96.63 | |
| TIGR02916 | 679 | PEP_his_kin putative PEP-CTERM system histidine ki | 96.62 | |
| PRK10549 | 466 | signal transduction histidine-protein kinase BaeS; | 96.59 | |
| PRK11100 | 475 | sensory histidine kinase CreC; Provisional | 96.53 | |
| smart00387 | 111 | HATPase_c Histidine kinase-like ATPases. Histidine | 96.48 | |
| TIGR01386 | 457 | cztS_silS_copS heavy metal sensor kinase. Members | 96.41 | |
| TIGR02938 | 494 | nifL_nitrog nitrogen fixation negative regulator N | 96.3 | |
| TIGR01058 | 637 | parE_Gpos DNA topoisomerase IV, B subunit, Gram-po | 96.24 | |
| PRK11006 | 430 | phoR phosphate regulon sensor protein; Provisional | 96.11 | |
| PLN03237 | 1465 | DNA topoisomerase 2; Provisional | 96.06 | |
| PRK10364 | 457 | sensor protein ZraS; Provisional | 96.01 | |
| PRK11086 | 542 | sensory histidine kinase DcuS; Provisional | 95.93 | |
| PRK10815 | 485 | sensor protein PhoQ; Provisional | 95.87 | |
| PRK09303 | 380 | adaptive-response sensory kinase; Validated | 95.52 | |
| PLN03128 | 1135 | DNA topoisomerase 2; Provisional | 95.41 | |
| PRK09467 | 435 | envZ osmolarity sensor protein; Provisional | 95.35 | |
| TIGR02966 | 333 | phoR_proteo phosphate regulon sensor kinase PhoR. | 95.33 | |
| PRK15347 | 921 | two component system sensor kinase SsrA; Provision | 95.3 | |
| PTZ00108 | 1388 | DNA topoisomerase 2-like protein; Provisional | 95.23 | |
| COG0187 | 635 | GyrB Type IIA topoisomerase (DNA gyrase/topo II, t | 95.17 | |
| PRK10337 | 449 | sensor protein QseC; Provisional | 94.94 | |
| PRK11466 | 914 | hybrid sensory histidine kinase TorS; Provisional | 94.88 | |
| PRK15053 | 545 | dpiB sensor histidine kinase DpiB; Provisional | 94.87 | |
| PRK11091 | 779 | aerobic respiration control sensor protein ArcB; P | 94.86 | |
| TIGR02956 | 968 | TMAO_torS TMAO reductase sytem sensor TorS. This p | 94.71 | |
| PRK10841 | 924 | hybrid sensory kinase in two-component regulatory | 94.67 | |
| PHA02569 | 602 | 39 DNA topoisomerase II large subunit; Provisional | 94.58 | |
| TIGR03785 | 703 | marine_sort_HK proteobacterial dedicated sortase s | 94.3 | |
| PRK11360 | 607 | sensory histidine kinase AtoS; Provisional | 94.28 | |
| PRK13837 | 828 | two-component VirA-like sensor kinase; Provisional | 94.25 | |
| PRK04069 | 161 | serine-protein kinase RsbW; Provisional | 94.04 | |
| PRK11107 | 919 | hybrid sensory histidine kinase BarA; Provisional | 94.01 | |
| TIGR01925 | 137 | spIIAB anti-sigma F factor. This model describes t | 94.0 | |
| PRK10618 | 894 | phosphotransfer intermediate protein in two-compon | 93.91 | |
| PRK10490 | 895 | sensor protein KdpD; Provisional | 93.91 | |
| PRK09835 | 482 | sensor kinase CusS; Provisional | 93.52 | |
| PTZ00109 | 903 | DNA gyrase subunit b; Provisional | 93.47 | |
| PRK03660 | 146 | anti-sigma F factor; Provisional | 93.47 | |
| COG3290 | 537 | CitA Signal transduction histidine kinase regulati | 93.35 | |
| PRK09959 | 1197 | hybrid sensory histidine kinase in two-component r | 93.31 | |
| COG4191 | 603 | Signal transduction histidine kinase regulating C4 | 93.13 | |
| PF13581 | 125 | HATPase_c_2: Histidine kinase-like ATPase domain | 92.92 | |
| COG0642 | 336 | BaeS Signal transduction histidine kinase [Signal | 92.38 | |
| COG5000 | 712 | NtrY Signal transduction histidine kinase involved | 92.25 | |
| TIGR01924 | 159 | rsbW_low_gc serine-protein kinase RsbW. This model | 92.08 | |
| PRK10547 | 670 | chemotaxis protein CheA; Provisional | 90.78 | |
| KOG0019 | 656 | consensus Molecular chaperone (HSP90 family) [Post | 89.76 | |
| PRK13557 | 540 | histidine kinase; Provisional | 88.99 | |
| PRK10600 | 569 | nitrate/nitrite sensor protein NarX; Provisional | 88.45 | |
| COG3920 | 221 | Signal transduction histidine kinase [Signal trans | 88.24 | |
| PRK11644 | 495 | sensory histidine kinase UhpB; Provisional | 88.15 | |
| COG0643 | 716 | CheA Chemotaxis protein histidine kinase and relat | 87.94 | |
| COG2172 | 146 | RsbW Anti-sigma regulatory factor (Ser/Thr protein | 87.08 | |
| PRK13560 | 807 | hypothetical protein; Provisional | 87.05 | |
| PRK11073 | 348 | glnL nitrogen regulation protein NR(II); Provision | 86.47 | |
| COG4251 | 750 | Bacteriophytochrome (light-regulated signal transd | 86.32 | |
| COG4585 | 365 | Signal transduction histidine kinase [Signal trans | 85.29 | |
| COG3850 | 574 | NarQ Signal transduction histidine kinase, nitrate | 84.33 | |
| KOG0787 | 414 | consensus Dehydrogenase kinase [Signal transductio | 83.77 |
| >KOG0020 consensus Endoplasmic reticulum glucose-regulated protein (GRP94/endoplasmin), HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-168 Score=1340.12 Aligned_cols=651 Identities=48% Similarity=0.856 Sum_probs=604.4
Q ss_pred CCcccchhhhHHHHHHHHHhcCCCCchhHHHHhHHhHHHHHHHHHhhccCCCcccCCCCCccEEEEEcCCCcEEEEEeCC
Q 004444 94 PLEKYEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRYLGVTEPELLKDAVDLDIRIQTDKDNGIITITDSG 173 (753)
Q Consensus 94 ~~e~~~Fq~d~~~ll~ll~~~LYs~~~vflRELIqNA~DA~~k~r~~~~~~~~~~~~~~~~~I~I~~d~~~~~l~I~DnG 173 (753)
.+++|.||++++|||+||+|+||+|++|||||||+||+||++|+|+++++++..++...++.|.|..|+.++.|.|.|.|
T Consensus 71 kaeKf~FQaEVnRmMklIINSLY~NKeIFLRELISNASDAlDKIRllaLtd~~~L~~~~el~ikIK~Dke~klLhi~DtG 150 (785)
T KOG0020|consen 71 KAEKFEFQAEVNRMMKLIINSLYRNKEIFLRELISNASDALDKIRLLALTDKDVLGETEELEIKIKADKEKKLLHITDTG 150 (785)
T ss_pred HhhhhhHHHHHHHHHHHHHHHHhhhhHHHHHHHHhhhhhhhhheeeeeccChhHhCcCcceEEEEeechhhCeeeEeccc
Confidence 57899999999999999999999999999999999999999999999999999998899999999999999999999999
Q ss_pred CCCCHHHHHHHHhHhhhcchhhHHHHhhccccC-CCCCCccccccchhheeecccCEEEEEEecCCCCCcEEEEeeCCCC
Q 004444 174 IGMTQQDLVDCLGTIAQSGTAKFLKAMKDSKDA-GGDSNLIGQFGVGFYSAFLVSDRVVVETKSPKSDKQYVWEGEANAS 252 (753)
Q Consensus 174 iGMt~~el~~~l~tIa~Sg~~~f~~~~~~~~~~-~~~~~~IGqFGIGf~S~F~vadkV~V~Tk~~~~~~~~~w~s~~~~~ 252 (753)
||||++||++||||||+||+.+|+.++++..+. +.-.++||||||||||+|+|||+|+|+|++ +++.+|+|+|++.
T Consensus 151 iGMT~edLi~NLGTIAkSGTs~Fl~Km~~~~~~~~~~~dlIGQFGVGFYsAfLVAD~vvVtsKh-NdD~QyiWESdan-- 227 (785)
T KOG0020|consen 151 IGMTREDLIKNLGTIAKSGTSEFLEKMQDSGDSEGLMNDLIGQFGVGFYSAFLVADRVVVTSKH-NDDSQYIWESDAN-- 227 (785)
T ss_pred CCccHHHHHHhhhhhhcccHHHHHHHhhccccchhhHHHHHHhcchhhhhhhhhcceEEEEecc-CCccceeeeccCc--
Confidence 999999999999999999999999999864211 112379999999999999999999999998 7889999999876
Q ss_pred ceEEEecCCCCCCCCCccEEEEEecCCCcCCCCHHHHHHHHHHhcCCCCcCeEEeccccccccccCCCCccccc--c-cc
Q 004444 253 SYTIREETNPEKLLPRGTRLTLYLKHDDKGFAHPERIQKLVKNYSQFVSFPIYTWQEKGYTKEVEVDEDPAETN--K-DK 329 (753)
Q Consensus 253 ~y~i~~~~~~~~~~~~GT~I~L~Lk~~~~~~~~~~~i~~lik~ys~fl~~PI~~~~~~~~~~~~~~~~~~~~~~--~-~~ 329 (753)
+|+|.+++++ ++.+|||.|+|||+++..+|+++++|+++|++||+||.|||++|..++.+.+++.+++|+... + ++
T Consensus 228 ~FsvseDprg-~tL~RGt~ItL~LkeEA~dyLE~dtlkeLvkkYSqFINFpI~lWsSKt~~~E~pvEEe~~t~e~~~ed~ 306 (785)
T KOG0020|consen 228 SFSVSEDPRG-NTLGRGTEITLYLKEEAGDYLEEDTLKELVKKYSQFINFPISLWSSKTVEVEVPVEEEEETEEDSTEDK 306 (785)
T ss_pred ceeeecCCCC-CcccCccEEEEEehhhhhhhcchhHHHHHHHHHHHhcCCceeeeeccceeeecccccccccccccccch
Confidence 8999999998 789999999999999999999999999999999999999999999998888888777665432 1 11
Q ss_pred hh--hH-HHhhhcccceeeeeccccccccCCCCcccCCCCCCHHHHHHHHHHhhcCCCCCceeeeeecccceeeEEEEEe
Q 004444 330 QD--ET-AEKKKKTKTVVERYWDWELTNETQPIWLRNPKEVTTEEYNEFYKKTFNEYLDPLASSHFTTEGEVEFRSILYV 406 (753)
Q Consensus 330 ~~--~~-~~~~~~~~~~~~~~~~~e~iN~~~piW~r~~~~v~~eey~~Fyk~~~~~~~~pl~~~h~~~eg~~~~~~llyi 406 (753)
++ ++ ++++.|+|+|.+++|+|+.+|..+|||+|+|++|+++||..||+++++++.+|++|+||++||.+.|++||||
T Consensus 307 ea~vEEee~EKpKTKKV~kT~wdWel~NdvKpIW~R~p~eV~EdEYt~FYkSlsKds~dPma~~HF~aEGeVtFksiLyV 386 (785)
T KOG0020|consen 307 EAAVEEEEEEKPKTKKVEKTVWDWELLNDVKPIWLRKPKEVTEDEYTKFYKSLSKDSTDPMAYIHFTAEGEVTFKSILYV 386 (785)
T ss_pred hhhhhhhhhccccccchhhcchhhhhhcccchhhccCchhcchHHHHHHHHhhhccccCccceeeeeccccEEEEEEEEe
Confidence 11 11 2335688999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCccccC-CCCcCeEEEeeeEEeecCCCCCCCcccccceeeeecCCCCCCcccHHhhcccHHHHHHHHHHHHHH
Q 004444 407 PAVAPMGKDDLIN-PKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKA 485 (753)
Q Consensus 407 P~~~p~~~~~~~~-~~~~~i~LYv~rVfI~d~~~~dllP~~l~FvkGVVDS~dLpLNvSRE~LQ~~~~l~~I~~~l~~kv 485 (753)
|..+|-++|+... ....+|+|||+||||+|++. +++|+||+||||||||+|||||||||+||++++|+.|++.|++|+
T Consensus 387 P~~~P~~lf~~Yg~~~~dniKLYVrrVFItDeF~-dmmPkYLsFikGvVDSDdLPLNVSrE~LQQHkllKvIkKKLvrK~ 465 (785)
T KOG0020|consen 387 PKKAPRDLFDEYGSKKSDNIKLYVRRVFITDEFH-DMMPKYLSFIKGVVDSDDLPLNVSRETLQQHKLLKVIKKKLVRKV 465 (785)
T ss_pred CCCCchHHHHHhccccccceeEEEEEEEecchHH-HHhHHHHHHHhhccCcCcCcccccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999987432 55689999999999999999 999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccCChHHHHH-HHHHHhHHhhhcccCCccChhhccCccceeeccCCCcccCHHHHHhhcCCCCceEEEEecC
Q 004444 486 FDMILGISMSENRADYEK-FWENFGKYLKMGCIDDRENHKPLAPLLRFFSSQSEDEMISLDEYVENMKPEQKDIYFIAAD 564 (753)
Q Consensus 486 ~~~L~~la~~~d~e~y~~-f~~~fg~~lK~G~~eD~~~~e~l~~LLrF~Ss~~~~~~~SL~eYv~rmk~~Qk~IYY~~~~ 564 (753)
++||++++. ++|.. ||++||.+||.|+++|+.||..|++||||+||+++++.+||++|++|||+.|+.|||++|.
T Consensus 466 LDmikKia~----e~~~d~FW~EFgtniKLGviED~sNr~rLAKLLrFqss~~~~~~TsLdqYveRMK~kQ~~IyymaGs 541 (785)
T KOG0020|consen 466 LDMIKKIAG----EKYDDIFWKEFGTNIKLGVIEDPSNRTRLAKLLRFQSSNHPTKITSLDQYVERMKEKQDKIYYMAGS 541 (785)
T ss_pred HHHHHHhhc----cccchHHHHHhccceeeeeeeCcccHHHHHHHHhhhccCCCCCcccHHHHHHHHhhccccEEEecCC
Confidence 999999996 57777 9999999999999999999999999999999998899999999999999999999999999
Q ss_pred CHHHHhcChhHHHhhhcCceEEEecCCCcHHHHHHhhhcCCcceEeccccccCcCCCchHHH--HhhHHHHHHHHHHHHH
Q 004444 565 SVASARNTPFLEKLLEKDLEVLYLVDPIDEIAVQNLKSYKEKNFVDISKEDLDLGEKNEEKE--KVMKEEFGQTCDWIKK 642 (753)
Q Consensus 565 ~~~~~~~sp~~E~~~~kg~eVL~l~dpiDE~~l~~L~~y~~~~f~~V~~~~l~l~~~~e~~~--~~~~~e~~~L~~~lk~ 642 (753)
|+.+++.|||+|.+.++||||||+|+|+||+|||.|.+|+|++|++|.++++.+++.+..++ +..+++|++|++|+|.
T Consensus 542 sr~e~E~sPfvERLlkKGyEVi~ltepVDEyciqalpe~d~KkFQNVaKEG~k~~~~eK~Ke~~e~l~~~FepL~~W~k~ 621 (785)
T KOG0020|consen 542 SRKEVEKSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKKFQNVAKEGVKFDKSEKTKESHEALEEEFEPLTKWLKD 621 (785)
T ss_pred cHhhhccCcHHHHHHhcCceEEEEcchhHHHHHHhhhhhcchhHhHHHhhhcccCcccchhHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999987665555 4557889999999998
Q ss_pred -HhCCceeEEEEeecCCCCCeEEEecCCCchHHHHHHHHHhccC---CCCccccccCceeEEECCCChHHHHHHhhhcCC
Q 004444 643 -RLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVG---DTSSMEFMRGRRVFEINPEHPIIQNLNAASKNC 718 (753)
Q Consensus 643 -~L~~kV~~V~vS~rL~~sPa~lv~~e~g~s~~Merimkaq~~~---~~~~~~~~~~k~~LEINp~HpLIk~L~~~~~~~ 718 (753)
+|.++|.++.||+||++|||++|++.+|||.+|+|||++|+.+ +....-|+.++++|||||.||||+.|+.+..++
T Consensus 622 ~alkd~ieka~vSqrL~~spcalVas~~GwsgNmERimksqa~~~~kD~~~~~Y~~qKkt~EINPRHPlirell~Ri~ad 701 (785)
T KOG0020|consen 622 KALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKSQAYQKSKDPSKNYYASQKKTFEINPRHPLIRELLRRIAAD 701 (785)
T ss_pred hHHHHHHHHHHHHHHhccCchhhhhhhccccccHHHHHHHhhhhccCCchhhHHhccCceeeeCCCChHHHHHHHHhhcC
Confidence 5789999999999999999999999999999999999999875 333334677899999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHhCCCCCccHHHHHhhC
Q 004444 719 PDDNDALRVVDLLYDAALVSSGFTVKSGRAWQQDI 753 (753)
Q Consensus 719 ~~d~~~~~l~~~Lyd~AlL~~G~~~edp~~fa~ri 753 (753)
+.|+.+++.|.+||++|.|.+||.+.|+..|+.||
T Consensus 702 eeD~t~~d~A~lmf~TAtlrSGf~L~d~~~fadrI 736 (785)
T KOG0020|consen 702 EEDETVKDTAVLMFETATLRSGFILQDTKDFADRI 736 (785)
T ss_pred cccchHHHHHHHHHHHHHhhcCccccchHHHHHHH
Confidence 99999999999999999999999999999999986
|
|
| >PTZ00272 heat shock protein 83 kDa (Hsp83); Provisional | Back alignment and domain information |
|---|
| >PTZ00130 heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >COG0326 HtpG Molecular chaperone, HSP90 family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >KOG0019 consensus Molecular chaperone (HSP90 family) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK05218 heat shock protein 90; Provisional | Back alignment and domain information |
|---|
| >PRK14083 HSP90 family protein; Provisional | Back alignment and domain information |
|---|
| >PF00183 HSP90: Hsp90 protein; InterPro: IPR001404 Molecular chaperones, or heat shock proteins (Hsps) are ubiquitous proteins that act to maintain proper protein folding within the cell [] | Back alignment and domain information |
|---|
| >PF13589 HATPase_c_3: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PDB: 3IED_A 2XCM_B 2JKI_B 3OPD_A 2O1V_B 2GQP_A 2O1W_C 1YT2_A 1TC6_A 2H8M_B | Back alignment and domain information |
|---|
| >TIGR00585 mutl DNA mismatch repair protein MutL | Back alignment and domain information |
|---|
| >COG1389 DNA topoisomerase VI, subunit B [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PRK00095 mutL DNA mismatch repair protein; Reviewed | Back alignment and domain information |
|---|
| >PRK04184 DNA topoisomerase VI subunit B; Validated | Back alignment and domain information |
|---|
| >TIGR01052 top6b DNA topoisomerase VI, B subunit | Back alignment and domain information |
|---|
| >PRK14868 DNA topoisomerase VI subunit B; Provisional | Back alignment and domain information |
|---|
| >COG0323 MutL DNA mismatch repair enzyme (predicted ATPase) [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PRK14867 DNA topoisomerase VI subunit B; Provisional | Back alignment and domain information |
|---|
| >PF02518 HATPase_c: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; InterPro: IPR003594 This domain is found in several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases [], heat shock protein HSP90 [, , ], phytochrome-like ATPases and DNA mismatch repair proteins | Back alignment and domain information |
|---|
| >PRK05559 DNA topoisomerase IV subunit B; Reviewed | Back alignment and domain information |
|---|
| >smart00433 TOP2c TopoisomeraseII | Back alignment and domain information |
|---|
| >TIGR01055 parE_Gneg DNA topoisomerase IV, B subunit, proteobacterial | Back alignment and domain information |
|---|
| >TIGR01059 gyrB DNA gyrase, B subunit | Back alignment and domain information |
|---|
| >PRK05644 gyrB DNA gyrase subunit B; Validated | Back alignment and domain information |
|---|
| >PRK14939 gyrB DNA gyrase subunit B; Provisional | Back alignment and domain information |
|---|
| >KOG1978 consensus DNA mismatch repair protein - MLH2/PMS1/Pms2 family [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG1979 consensus DNA mismatch repair protein - MLH1 family [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >KOG1977 consensus DNA mismatch repair protein - MLH3 family [Replication, recombination and repair] | Back alignment and domain information |
|---|
| >cd00075 HATPase_c Histidine kinase-like ATPases; This family includes several ATP-binding proteins for example: histidine kinase, DNA gyrase B, topoisomerases, heat shock protein HSP90, phytochrome-like ATPases and DNA mismatch repair proteins | Back alignment and domain information |
|---|
| >PRK10755 sensor protein BasS/PmrB; Provisional | Back alignment and domain information |
|---|
| >PRK10604 sensor protein RstB; Provisional | Back alignment and domain information |
|---|
| >PRK09470 cpxA two-component sensor protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02916 PEP_his_kin putative PEP-CTERM system histidine kinase | Back alignment and domain information |
|---|
| >PRK10549 signal transduction histidine-protein kinase BaeS; Provisional | Back alignment and domain information |
|---|
| >PRK11100 sensory histidine kinase CreC; Provisional | Back alignment and domain information |
|---|
| >smart00387 HATPase_c Histidine kinase-like ATPases | Back alignment and domain information |
|---|
| >TIGR01386 cztS_silS_copS heavy metal sensor kinase | Back alignment and domain information |
|---|
| >TIGR02938 nifL_nitrog nitrogen fixation negative regulator NifL | Back alignment and domain information |
|---|
| >TIGR01058 parE_Gpos DNA topoisomerase IV, B subunit, Gram-positive | Back alignment and domain information |
|---|
| >PRK11006 phoR phosphate regulon sensor protein; Provisional | Back alignment and domain information |
|---|
| >PLN03237 DNA topoisomerase 2; Provisional | Back alignment and domain information |
|---|
| >PRK10364 sensor protein ZraS; Provisional | Back alignment and domain information |
|---|
| >PRK11086 sensory histidine kinase DcuS; Provisional | Back alignment and domain information |
|---|
| >PRK10815 sensor protein PhoQ; Provisional | Back alignment and domain information |
|---|
| >PRK09303 adaptive-response sensory kinase; Validated | Back alignment and domain information |
|---|
| >PLN03128 DNA topoisomerase 2; Provisional | Back alignment and domain information |
|---|
| >PRK09467 envZ osmolarity sensor protein; Provisional | Back alignment and domain information |
|---|
| >TIGR02966 phoR_proteo phosphate regulon sensor kinase PhoR | Back alignment and domain information |
|---|
| >PRK15347 two component system sensor kinase SsrA; Provisional | Back alignment and domain information |
|---|
| >PTZ00108 DNA topoisomerase 2-like protein; Provisional | Back alignment and domain information |
|---|
| >COG0187 GyrB Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PRK10337 sensor protein QseC; Provisional | Back alignment and domain information |
|---|
| >PRK11466 hybrid sensory histidine kinase TorS; Provisional | Back alignment and domain information |
|---|
| >PRK15053 dpiB sensor histidine kinase DpiB; Provisional | Back alignment and domain information |
|---|
| >PRK11091 aerobic respiration control sensor protein ArcB; Provisional | Back alignment and domain information |
|---|
| >TIGR02956 TMAO_torS TMAO reductase sytem sensor TorS | Back alignment and domain information |
|---|
| >PRK10841 hybrid sensory kinase in two-component regulatory system with RcsB and YojN; Provisional | Back alignment and domain information |
|---|
| >PHA02569 39 DNA topoisomerase II large subunit; Provisional | Back alignment and domain information |
|---|
| >TIGR03785 marine_sort_HK proteobacterial dedicated sortase system histidine kinase | Back alignment and domain information |
|---|
| >PRK11360 sensory histidine kinase AtoS; Provisional | Back alignment and domain information |
|---|
| >PRK13837 two-component VirA-like sensor kinase; Provisional | Back alignment and domain information |
|---|
| >PRK04069 serine-protein kinase RsbW; Provisional | Back alignment and domain information |
|---|
| >PRK11107 hybrid sensory histidine kinase BarA; Provisional | Back alignment and domain information |
|---|
| >TIGR01925 spIIAB anti-sigma F factor | Back alignment and domain information |
|---|
| >PRK10618 phosphotransfer intermediate protein in two-component regulatory system with RcsBC; Provisional | Back alignment and domain information |
|---|
| >PRK10490 sensor protein KdpD; Provisional | Back alignment and domain information |
|---|
| >PRK09835 sensor kinase CusS; Provisional | Back alignment and domain information |
|---|
| >PTZ00109 DNA gyrase subunit b; Provisional | Back alignment and domain information |
|---|
| >PRK03660 anti-sigma F factor; Provisional | Back alignment and domain information |
|---|
| >COG3290 CitA Signal transduction histidine kinase regulating citrate/malate metabolism [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional | Back alignment and domain information |
|---|
| >COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF13581 HATPase_c_2: Histidine kinase-like ATPase domain | Back alignment and domain information |
|---|
| >COG0642 BaeS Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG5000 NtrY Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >TIGR01924 rsbW_low_gc serine-protein kinase RsbW | Back alignment and domain information |
|---|
| >PRK10547 chemotaxis protein CheA; Provisional | Back alignment and domain information |
|---|
| >KOG0019 consensus Molecular chaperone (HSP90 family) [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK13557 histidine kinase; Provisional | Back alignment and domain information |
|---|
| >PRK10600 nitrate/nitrite sensor protein NarX; Provisional | Back alignment and domain information |
|---|
| >COG3920 Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK11644 sensory histidine kinase UhpB; Provisional | Back alignment and domain information |
|---|
| >COG0643 CheA Chemotaxis protein histidine kinase and related kinases [Cell motility and secretion / Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG2172 RsbW Anti-sigma regulatory factor (Ser/Thr protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PRK13560 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PRK11073 glnL nitrogen regulation protein NR(II); Provisional | Back alignment and domain information |
|---|
| >COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG4585 Signal transduction histidine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >COG3850 NarQ Signal transduction histidine kinase, nitrate/nitrite-specific [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG0787 consensus Dehydrogenase kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 753 | ||||
| 2o1u_A | 666 | Structure Of Full Length Grp94 With Amp-Pnp Bound L | 1e-147 | ||
| 2cg9_A | 677 | Crystal Structure Of An Hsp90-Sba1 Closed Chaperone | 1e-135 | ||
| 2o1w_A | 506 | Structure Of N-Terminal Plus Middle Domains (N+m) O | 1e-123 | ||
| 2iop_A | 624 | Crystal Structure Of Full-Length Htpg, The Escheric | 1e-107 | ||
| 1y4s_A | 559 | Conformation Rearrangement Of Heat Shock Protein 90 | 1e-103 | ||
| 3hjc_A | 444 | Crystal Structure Of The Carboxy-Terminal Domain Of | 7e-88 | ||
| 3q6m_A | 448 | Crystal Structure Of Human Mc-Hsp90 In C2221 Space | 8e-88 | ||
| 2o1t_A | 450 | Structure Of Middle Plus C-Terminal Domains (M+c) O | 3e-84 | ||
| 2cge_A | 405 | Crystal Structure Of An Hsp90-Sba1 Closed Chaperone | 7e-80 | ||
| 3peh_A | 281 | Crystal Structure Of The N-Terminal Domain Of An Hs | 9e-62 | ||
| 3pry_A | 268 | Crystal Structure Of The Middle Domain Of Human Hsp | 2e-60 | ||
| 1usu_A | 260 | The Structure Of The Complex Between Aha1 And Hsp90 | 7e-59 | ||
| 1usv_A | 260 | The Structure Of The Complex Between Aha1 And Hsp90 | 1e-58 | ||
| 1hk7_A | 288 | Middle Domain Of Hsp90 Length = 288 | 2e-58 | ||
| 3h80_A | 231 | Crystal Structure Of The Amino-Terminal Domain Of H | 8e-58 | ||
| 2jki_A | 223 | Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Leng | 8e-57 | ||
| 1u2o_A | 236 | Crystal Structure Of The N-Domain Of Grp94 Lacking | 1e-56 | ||
| 3k60_B | 223 | Crystal Structure Of N-Terminal Domain Of Plasmodiu | 3e-56 | ||
| 2esa_A | 236 | Grp94 N-Terminal Domain Bound To Geldanamycin: Effe | 4e-56 | ||
| 2xcm_A | 214 | Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord | 6e-56 | ||
| 1uyi_A | 236 | Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-F | 3e-55 | ||
| 1u0y_A | 273 | N-Domain Of Grp94, With The Charged Domain, In Comp | 3e-55 | ||
| 1uy6_A | 236 | Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy- | 3e-55 | ||
| 1qy5_A | 269 | Crystal Structure Of The N-Domain Of The Er Hsp90 C | 3e-55 | ||
| 2fwy_A | 256 | Structure Of Human Hsp90-Alpha Bound To The Potent | 3e-55 | ||
| 3qdd_A | 237 | Hsp90a N-Terminal Domain In Complex With Biib021 Le | 3e-55 | ||
| 4egh_A | 232 | Hsp90-Alpha Atpase Domain In Complex With (4-Hydrox | 3e-55 | ||
| 4awo_A | 230 | Complex Of Hsp90 Atpase Domain With Tropane Derived | 3e-55 | ||
| 2ye2_A | 252 | Hsp90 Inhibitors And Drugs From Fragment And Virtua | 3e-55 | ||
| 3bm9_A | 226 | Discovery Of Benzisoxazoles As Potent Inhibitors Of | 3e-55 | ||
| 3b24_A | 229 | Hsp90 Alpha N-Terminal Domain In Complex With An Am | 3e-55 | ||
| 3inw_A | 228 | Hsp90 N-Terminal Domain With Pochoxime A Length = 2 | 4e-55 | ||
| 2ye7_A | 252 | Hsp90 Inhibitors And Drugs From Fragment And Virtua | 4e-55 | ||
| 2bsm_A | 235 | Novel, Potent Small Molecule Inhibitors Of The Mole | 4e-55 | ||
| 2ccs_A | 236 | Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Py | 4e-55 | ||
| 3ft5_A | 249 | Structure Of Hsp90 Bound With A Novel Fragment Leng | 4e-55 | ||
| 3r4m_A | 228 | Optimization Of Potent, Selective, And Orally Bioav | 4e-55 | ||
| 4eeh_A | 229 | Hsp90 Alpha N-Terminal Domain In Complex With An In | 4e-55 | ||
| 3k97_A | 251 | Hsp90 N-Terminal Domain In Complex With 4-Chloro-6- | 5e-55 | ||
| 1byq_A | 228 | Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 22 | 5e-55 | ||
| 2xjg_A | 249 | Structure Of Hsp90 With Small Molecule Inhibitor Bo | 6e-55 | ||
| 1yc1_A | 264 | Crystal Structures Of Human Hsp90alpha Complexed Wi | 7e-55 | ||
| 2xjj_A | 249 | Structre Of Hsp90 With Small Molecule Inhibitor Bou | 9e-55 | ||
| 1y6z_A | 263 | Middle Domain Of Plasmodium Falciparum Putative Hea | 1e-54 | ||
| 2yee_A | 252 | Hsp90 Inhibitors And Drugs From Fragment And Virtua | 1e-54 | ||
| 3d0b_A | 232 | Crystal Structure Of Benzamide Tetrahydro-4h-Carbaz | 2e-54 | ||
| 4gqt_A | 227 | N-Terminal Domain Of C. Elegans Hsp90 Length = 227 | 3e-54 | ||
| 1a4h_A | 230 | Structure Of The N-Terminal Domain Of The Yeast Hsp | 4e-54 | ||
| 1ah8_A | 220 | Structure Of The Orthorhombic Form Of The N-Termina | 4e-54 | ||
| 2bre_A | 219 | Structure Of A Hsp90 Inhibitor Bound To The N-Termi | 5e-54 | ||
| 2yi0_A | 229 | Structural Characterization Of 5-Aryl-4-(5-Substitu | 5e-54 | ||
| 1zw9_A | 240 | Yeast Hsp82 In Complex With The Novel Hsp90 Inhibit | 6e-54 | ||
| 2yga_A | 220 | E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel | 6e-54 | ||
| 3hhu_A | 224 | Human Heat-Shock Protein 90 (Hsp90) In Complex With | 9e-54 | ||
| 3k98_A | 232 | Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-C | 9e-54 | ||
| 3eko_A | 226 | Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 | 9e-54 | ||
| 1us7_A | 214 | Complex Of Hsp90 And P50 Length = 214 | 1e-53 | ||
| 2xdu_A | 236 | Structre Of Hsp90 With Small Molecule Inhibitor Bou | 1e-53 | ||
| 2xx2_A | 214 | Macrolactone Inhibitor Bound To Hsp90 N-Term Length | 1e-53 | ||
| 1am1_A | 213 | Atp Binding Site In The Hsp90 Molecular Chaperone L | 1e-53 | ||
| 3tuh_A | 209 | Crystal Structure Of The N-Terminal Domain Of An Hs | 1e-53 | ||
| 1bgq_A | 225 | Radicicol Bound To The Atp Binding Site Of The N-Te | 1e-53 | ||
| 2cgf_A | 225 | A Radicicol Analogue Bound To The Atp Binding Site | 1e-53 | ||
| 2wep_A | 220 | Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp | 1e-53 | ||
| 2yge_A | 220 | E88g-n92l Mutant Of N-term Hsp90 Complexed With Gel | 1e-53 | ||
| 3c0e_A | 240 | Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 9 | 2e-53 | ||
| 2yjw_A | 209 | Tricyclic Series Of Hsp90 Inhibitors Length = 209 | 3e-53 | ||
| 2qfo_A | 207 | Hsp90 Complexed With A143571 And A516383 Length = 2 | 4e-53 | ||
| 2jjc_A | 218 | Hsp90 Alpha Atpase Domain With Bound Small Molecule | 4e-53 | ||
| 1osf_A | 215 | Human Hsp90 In Complex With 17-desmethoxy-17-n,n- D | 4e-53 | ||
| 2ygf_A | 220 | L89v, L93i And V136m Mutant Of N-term Hsp90 Complex | 4e-53 | ||
| 2k5b_A | 210 | Human Cdc37-Hsp90 Docking Model Based On Nmr Length | 5e-53 | ||
| 2qf6_A | 207 | Hsp90 Complexed With A56322 Length = 207 | 5e-53 | ||
| 3opd_A | 231 | Crystal Structure Of The N-Terminal Domain Of An Hs | 4e-52 | ||
| 3o6o_A | 214 | Crystal Structure Of The N-Terminal Domain Of An Hs | 4e-52 | ||
| 1uym_A | 220 | Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimetho | 7e-52 | ||
| 3nmq_A | 239 | Hsp90b N-Terminal Domain In Complex With Ec44, A Py | 1e-51 | ||
| 2gq0_A | 303 | Crystal Structure Of The Middle Domain Of Htpg, The | 1e-48 | ||
| 2ior_A | 235 | Crystal Structure Of The N-Terminal Domain Of Htpg, | 1e-45 | ||
| 3ied_A | 272 | Crystal Structure Of N-Terminal Domain Of Plasmodiu | 1e-44 | ||
| 2akp_A | 186 | Hsp90 Delta24-n210 Mutant Length = 186 | 1e-44 |
| >pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound Length = 666 | Back alignment and structure |
|
| >pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 677 | Back alignment and structure |
| >pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94 Length = 506 | Back alignment and structure |
| >pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 624 | Back alignment and structure |
| >pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon Adp Binding Length = 559 | Back alignment and structure |
| >pdb|3HJC|A Chain A, Crystal Structure Of The Carboxy-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312 Length = 444 | Back alignment and structure |
| >pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group Length = 448 | Back alignment and structure |
| >pdb|2O1T|A Chain A, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94 Length = 450 | Back alignment and structure |
| >pdb|2CGE|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone Complex Length = 405 | Back alignment and structure |
| >pdb|3PEH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Plasmodium Falciparum, Pfl1070c In The Presence Of A Thienopyrimidine Derivative Length = 281 | Back alignment and structure |
| >pdb|3PRY|A Chain A, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta Refined At 2.3 A Resolution Length = 268 | Back alignment and structure |
| >pdb|1USU|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 | Back alignment and structure |
| >pdb|1USV|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90 Length = 260 | Back alignment and structure |
| >pdb|1HK7|A Chain A, Middle Domain Of Hsp90 Length = 288 | Back alignment and structure |
| >pdb|3H80|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90 From Leishmania Major, Lmjf33.0312:m1-K213 Length = 231 | Back alignment and structure |
| >pdb|2JKI|A Chain A, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain Length = 223 | Back alignment and structure |
| >pdb|1U2O|A Chain A, Crystal Structure Of The N-Domain Of Grp94 Lacking The Charged Domain In Complex With Neca Length = 236 | Back alignment and structure |
| >pdb|3K60|B Chain B, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf07_0029) Bound To Adp Length = 223 | Back alignment and structure |
| >pdb|2ESA|A Chain A, Grp94 N-Terminal Domain Bound To Geldanamycin: Effects Of Mutants 168- 169 Ks-Aa Length = 236 | Back alignment and structure |
| >pdb|2XCM|A Chain A, Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord2 Domain Length = 214 | Back alignment and structure |
| >pdb|1UYI|A Chain A, Human Hsp90-Alpha With 8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9- Pent-9h-Purin-6-Ylamine Length = 236 | Back alignment and structure |
| >pdb|1U0Y|A Chain A, N-Domain Of Grp94, With The Charged Domain, In Complex With The Novel Ligand N-Propyl Carboxyamido Adenosine Length = 273 | Back alignment and structure |
| >pdb|1UY6|A Chain A, Human Hsp90-Alpha With 9-Butyl-8-(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine Length = 236 | Back alignment and structure |
| >pdb|1QY5|A Chain A, Crystal Structure Of The N-Domain Of The Er Hsp90 Chaperone Grp94 In Complex With The Specific Ligand Neca Length = 269 | Back alignment and structure |
| >pdb|2FWY|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water Soluble Inhibitor Pu-H64 Length = 256 | Back alignment and structure |
| >pdb|3QDD|A Chain A, Hsp90a N-Terminal Domain In Complex With Biib021 Length = 237 | Back alignment and structure |
| >pdb|4EGH|A Chain A, Hsp90-Alpha Atpase Domain In Complex With (4-Hydroxyphenyl)morpholin- 4-Yl Methanone Length = 232 | Back alignment and structure |
| >pdb|4AWO|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived Inhibitors Length = 230 | Back alignment and structure |
| >pdb|2YE2|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 | Back alignment and structure |
| >pdb|3BM9|A Chain A, Discovery Of Benzisoxazoles As Potent Inhibitors Of Chaperone Hsp90 Length = 226 | Back alignment and structure |
| >pdb|3B24|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Aminotriazine Fragment Molecule Length = 229 | Back alignment and structure |
| >pdb|3INW|A Chain A, Hsp90 N-Terminal Domain With Pochoxime A Length = 228 | Back alignment and structure |
| >pdb|2YE7|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 | Back alignment and structure |
| >pdb|2BSM|A Chain A, Novel, Potent Small Molecule Inhibitors Of The Molecular Chaperone Hsp90 Discovered Through Structure-Based Design Length = 235 | Back alignment and structure |
| >pdb|2CCS|A Chain A, Human Hsp90 With 4-Chloro-6-(4-Piperazin-1-Yl-1h-Pyrazol-3- Yl)-Benzene-1,2-Diol Length = 236 | Back alignment and structure |
| >pdb|3FT5|A Chain A, Structure Of Hsp90 Bound With A Novel Fragment Length = 249 | Back alignment and structure |
| >pdb|3R4M|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable Pyrrolodinopyrimidine-Containing Inhibitors Of Heat Shock Protein 90. Identification Of Development Candidate 2-Amino-4-{4-Chloro-2-[2-(4- Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2- Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3, 4-D]pyrimidine-6-Carboxamide Length = 228 | Back alignment and structure |
| >pdb|4EEH|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor 3-(4- Hydroxy-Phenyl)-1h-Indazol-6-Ol Length = 229 | Back alignment and structure |
| >pdb|3K97|A Chain A, Hsp90 N-Terminal Domain In Complex With 4-Chloro-6-{[(2r)-2- (2-Methylphenyl)pyrrolidin-1-Yl]carbonyl}benzene-1, 3-Diol Length = 251 | Back alignment and structure |
| >pdb|1BYQ|A Chain A, Hsp90 N-Terminal Domain Bound To Adp-Mg Length = 228 | Back alignment and structure |
| >pdb|2XJG|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound Length = 249 | Back alignment and structure |
| >pdb|1YC1|A Chain A, Crystal Structures Of Human Hsp90alpha Complexed With Dihydroxyphenylpyrazoles Length = 264 | Back alignment and structure |
| >pdb|2XJJ|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 249 | Back alignment and structure |
| >pdb|1Y6Z|A Chain A, Middle Domain Of Plasmodium Falciparum Putative Heat Shock Protein Pf14_0417 Length = 263 | Back alignment and structure |
| >pdb|2YEE|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual Screening Length = 252 | Back alignment and structure |
| >pdb|3D0B|A Chain A, Crystal Structure Of Benzamide Tetrahydro-4h-Carbazol-4-One Bound To Hsp90 Length = 232 | Back alignment and structure |
| >pdb|4GQT|A Chain A, N-Terminal Domain Of C. Elegans Hsp90 Length = 227 | Back alignment and structure |
| >pdb|1A4H|A Chain A, Structure Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone In Complex With Geldanamycin Length = 230 | Back alignment and structure |
| >pdb|1AH8|A Chain A, Structure Of The Orthorhombic Form Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 220 | Back alignment and structure |
| >pdb|2BRE|A Chain A, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of Yeast Hsp90. Length = 219 | Back alignment and structure |
| >pdb|2YI0|A Chain A, Structural Characterization Of 5-Aryl-4-(5-Substituted-2-4- Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors. Length = 229 | Back alignment and structure |
| >pdb|1ZW9|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor 8-(6-Bromo- Benzo[1, 3]dioxol-5-Ylsulfanyl)-9-(3-Isopropylamino-Propyl)- Adenine Length = 240 | Back alignment and structure |
| >pdb|2YGA|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 | Back alignment and structure |
| >pdb|3HHU|A Chain A, Human Heat-Shock Protein 90 (Hsp90) In Complex With {4-[3- (2,4-Dihydroxy-5-Isopropyl-Phenyl)-5-Thioxo- 1,5-Dihydro- [1,2,4]triazol-4-Yl]-Benzyl}-Carbamic Acid Ethyl Ester {zk 2819} Length = 224 | Back alignment and structure |
| >pdb|3K98|A Chain A, Hsp90 N-Terminal Domain In Complex With (1r)-2-(5-Chloro-2, 4-Dihydroxybenzoyl)-N-Ethylisoindoline-1-Carboxamide Length = 232 | Back alignment and structure |
| >pdb|3EKO|A Chain A, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90 Molecular Chaperone Length = 226 | Back alignment and structure |
| >pdb|1US7|A Chain A, Complex Of Hsp90 And P50 Length = 214 | Back alignment and structure |
| >pdb|2XDU|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound Length = 236 | Back alignment and structure |
| >pdb|2XX2|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term Length = 214 | Back alignment and structure |
| >pdb|1AM1|A Chain A, Atp Binding Site In The Hsp90 Molecular Chaperone Length = 213 | Back alignment and structure |
| >pdb|3TUH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 In The Presence Of An The Inhibitor Ganetespib Length = 209 | Back alignment and structure |
| >pdb|1BGQ|A Chain A, Radicicol Bound To The Atp Binding Site Of The N-Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225 | Back alignment and structure |
| >pdb|2CGF|A Chain A, A Radicicol Analogue Bound To The Atp Binding Site Of The N- Terminal Domain Of The Yeast Hsp90 Chaperone Length = 225 | Back alignment and structure |
| >pdb|2WEP|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp Length = 220 | Back alignment and structure |
| >pdb|2YGE|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 | Back alignment and structure |
| >pdb|3C0E|A Chain A, Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 98-99 Ks- Aa Length = 240 | Back alignment and structure |
| >pdb|2YJW|A Chain A, Tricyclic Series Of Hsp90 Inhibitors Length = 209 | Back alignment and structure |
| >pdb|2QFO|A Chain A, Hsp90 Complexed With A143571 And A516383 Length = 207 | Back alignment and structure |
| >pdb|2JJC|A Chain A, Hsp90 Alpha Atpase Domain With Bound Small Molecule Fragment Length = 218 | Back alignment and structure |
| >pdb|1OSF|A Chain A, Human Hsp90 In Complex With 17-desmethoxy-17-n,n- Dimethylaminoethylamino-geldanamycin Length = 215 | Back alignment and structure |
| >pdb|2YGF|A Chain A, L89v, L93i And V136m Mutant Of N-term Hsp90 Complexed With Geldanamycin Length = 220 | Back alignment and structure |
| >pdb|2K5B|A Chain A, Human Cdc37-Hsp90 Docking Model Based On Nmr Length = 210 | Back alignment and structure |
| >pdb|2QF6|A Chain A, Hsp90 Complexed With A56322 Length = 207 | Back alignment and structure |
| >pdb|3OPD|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of A Benzamide Derivative Length = 231 | Back alignment and structure |
| >pdb|3O6O|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of An The Inhibitor Biib021 Length = 214 | Back alignment and structure |
| >pdb|1UYM|A Chain A, Human Hsp90-Beta With Pu3 (9-Butyl-8(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine) Length = 220 | Back alignment and structure |
| >pdb|3NMQ|A Chain A, Hsp90b N-Terminal Domain In Complex With Ec44, A Pyrrolo-Pyrimidine Methoxypyridine Inhibitor Length = 239 | Back alignment and structure |
| >pdb|2GQ0|A Chain A, Crystal Structure Of The Middle Domain Of Htpg, The E. Coli Hsp90 Length = 303 | Back alignment and structure |
| >pdb|2IOR|A Chain A, Crystal Structure Of The N-Terminal Domain Of Htpg, The Escherichia Coli Hsp90, Bound To Adp Length = 235 | Back alignment and structure |
| >pdb|3IED|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium Falciparum Hsp90 (Pf14_0417) In Complex With Amppn Length = 272 | Back alignment and structure |
| >pdb|2AKP|A Chain A, Hsp90 Delta24-n210 Mutant Length = 186 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} Length = 677 | Back alignment and structure |
|---|
Score = 848 bits (2192), Expect = 0.0
Identities = 286/669 (42%), Positives = 434/669 (64%), Gaps = 33/669 (4%)
Query: 96 EKYEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRYLGVTEPELLKDAVDLD 155
E +E+QAE+++LM LI+N++YSNKE+FLRELISNASDALDK+RY +++P+ L+ DL
Sbjct: 4 ETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLF 63
Query: 156 IRIQTDKDNGIITITDSGIGMTQQDLVDCLGTIAQSGTAKFLKAMKDSKDAGGDSNLIGQ 215
IRI + ++ I DSGIGMT+ +L++ LGTIA+SGT F++A+ AG D ++IGQ
Sbjct: 64 IRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALS----AGADVSMIGQ 119
Query: 216 FGVGFYSAFLVSDRVVVETKSPKSDKQYVWEGEANASSYTIREETNPEKLLPRGTRLTLY 275
FGVGFYS FLV+DRV V +KS D+QY+WE A S+T+ + E++ RGT L L+
Sbjct: 120 FGVGFYSLFLVADRVQVISKSN-DDEQYIWESNAG-GSFTVTLDEVNERI-GRGTILRLF 176
Query: 276 LKHDDKGFAHPERIQKLVKNYSQFVSFPIYTWQEKGYTKEVEVDEDPAETNK-------- 327
LK D + +RI++++K +S+FV++PI K KEV + E+ + +
Sbjct: 177 LKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIPEEEKKDEEKKDEEKKD 236
Query: 328 --------DKQDETAEKKKKTKTVVERYWDWELTNETQPIWLRNPKEVTTEEYNEFYKKT 379
++ DE EKK KTK V E + E N+T+P+W RNP ++T EEYN FYK
Sbjct: 237 EDDKKPKLEEVDEEEEKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSI 296
Query: 380 FNEYLDPLASSHFTTEGEVEFRSILYVPAVAPMGKDDLINP--KTKNIRLYVKRVFISDD 437
N++ DPL HF+ EG++EFR+IL++P AP DL K NI+LYV+RVFI+D+
Sbjct: 297 SNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPF---DLFESKKKKNNIKLYVRRVFITDE 353
Query: 438 FDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGISMSEN 497
+ +L P +LSFVKGVVDS DLPLN+SRE+LQ+++I++++RK +V+K + ++E+
Sbjct: 354 AE-DLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFN--EIAED 410
Query: 498 RADYEKFWENFGKYLKMGCIDDRENHKPLAPLLRFFSSQSEDEMISLDEYVENMKPEQKD 557
+EKF+ F K +K+G +D +N LA LLR+ S++S DE+ SL +YV M QK+
Sbjct: 411 SEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKN 470
Query: 558 IYFIAADSVASARNTPFLEKLLEKDLEVLYLVDPIDEIAVQNLKSYKEKNFVDISKEDLD 617
IY+I +S+ + +PFL+ L K+ EVL+L DPIDE A LK ++ K VDI+K+
Sbjct: 471 IYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKDFEL 530
Query: 618 L-GEKNEEKEKVMKEEFGQTCDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANME 676
++ + + + +E+ +K+ LGD+V V +S +L +P + + +FGWSANME
Sbjct: 531 EETDEEKAEREKEIKEYEPLTKALKEILGDQVEKVVVSYKLLDAPAAIRTGQFGWSANME 590
Query: 677 RLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASKNCPDDNDALR-VVDLLYDAA 735
R+MKAQ + D+S +M ++ FEI+P+ PII+ L + ++ + LLY+ A
Sbjct: 591 RIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEGGAQDKTVKDLTKLLYETA 650
Query: 736 LVSSGFTVK 744
L++SGF++
Sbjct: 651 LLTSGFSLD 659
|
| >2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A Length = 666 | Back alignment and structure |
|---|
| >2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A Length = 624 | Back alignment and structure |
|---|
| >1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A Length = 559 | Back alignment and structure |
|---|
| >3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} Length = 444 | Back alignment and structure |
|---|
| >3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A Length = 448 | Back alignment and structure |
|---|
| >2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} Length = 405 | Back alignment and structure |
|---|
| >1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 Length = 288 | Back alignment and structure |
|---|
| >2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} Length = 303 | Back alignment and structure |
|---|
| >3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} Length = 268 | Back alignment and structure |
|---|
| >1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A Length = 260 | Back alignment and structure |
|---|
| >1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} Length = 263 | Back alignment and structure |
|---|
| >3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* Length = 281 | Back alignment and structure |
|---|
| >1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* Length = 269 | Back alignment and structure |
|---|
| >2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* Length = 236 | Back alignment and structure |
|---|
| >2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A Length = 220 | Back alignment and structure |
|---|
| >1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* Length = 264 | Back alignment and structure |
|---|
| >3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... Length = 228 | Back alignment and structure |
|---|
| >3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* Length = 256 | Back alignment and structure |
|---|
| >3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} Length = 239 | Back alignment and structure |
|---|
| >2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} Length = 235 | Back alignment and structure |
|---|
| >3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} Length = 272 | Back alignment and structure |
|---|
| >1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 Length = 126 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2zbk_B Type 2 DNA topoisomerase 6 subunit B; DNA binding protein, decatenation, ATPase, drug design, DNA-binding, magnesium, metal-binding; HET: RDC; 3.56A {Sulfolobus shibatae} Length = 530 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 753 | |||
| 2cg9_A | 677 | ATP-dependent molecular chaperone HSP82; chaperone | 100.0 | |
| 2o1u_A | 666 | Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, | 100.0 | |
| 2ioq_A | 624 | Chaperone protein HTPG; heat shock protein, HSP90; | 100.0 | |
| 1y4s_A | 559 | Chaperone protein HTPG; HSP90, molecular chaperone | 100.0 | |
| 3hjc_A | 444 | Heat shock protein 83-1; sleeping sickness, struct | 100.0 | |
| 3q6m_A | 448 | Heat shock protein HSP 90-alpha; three domains, tr | 100.0 | |
| 2cge_A | 405 | ATP-dependent molecular chaperone HSP82; chaperone | 100.0 | |
| 1hk7_A | 288 | Heat shock protein HSP82; ATPase, chaperone; 2.5A | 100.0 | |
| 2gq0_A | 303 | Chaperone protein HTPG; molecular chaperone, HSP90 | 100.0 | |
| 3pry_A | 268 | Heat shock protein HSP 90-beta; structural genomic | 100.0 | |
| 1usu_A | 260 | Heat shock protein HSP82; chaperone/complex, chape | 100.0 | |
| 1y6z_A | 263 | Heat shock protein, putative; chaperone, structura | 100.0 | |
| 3peh_A | 281 | Endoplasmin homolog; structural genomics, structur | 100.0 | |
| 3ied_A | 272 | Heat shock protein; HSP90, chaperone, structural g | 100.0 | |
| 3nmq_A | 239 | Heat shock protein HSP 90-beta; ATPase, chaperone- | 100.0 | |
| 1qy5_A | 269 | Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: N | 100.0 | |
| 3o0i_A | 256 | HSP90AA1 protein; HSP90 heat-shock proteins, chape | 100.0 | |
| 3t0h_A | 228 | Heat shock protein HSP 90-alpha; chaperone, ATPase | 100.0 | |
| 2gqp_A | 236 | Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, | 100.0 | |
| 2wer_A | 220 | ATP-dependent molecular chaperone HSP82; ATPase, A | 100.0 | |
| 1yc1_A | 264 | HSP 86, heat shock protein HSP 90-alpha; cell-cycl | 100.0 | |
| 2ior_A | 235 | Chaperone protein HTPG; heat shock protein, HSP90; | 100.0 | |
| 1sf8_A | 126 | Chaperone protein HTPG; four helix bundle dimeriza | 99.96 | |
| 1b63_A | 333 | MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A | 99.72 | |
| 1h7s_A | 365 | PMS1 protein homolog 2; DNA repair, GHL ATPase, mi | 99.53 | |
| 3h4l_A | 367 | DNA mismatch repair protein PMS1; ATP binding, DNA | 99.39 | |
| 3na3_A | 348 | DNA mismatch repair protein MLH1; MUTL protein hom | 99.38 | |
| 1mu5_A | 471 | Type II DNA topoisomerase VI subunit B; GHKL ATPas | 98.84 | |
| 3fv5_A | 201 | DNA topoisomerase 4 subunit B; topoisomerase IV B | 98.84 | |
| 2zbk_B | 530 | Type 2 DNA topoisomerase 6 subunit B; DNA binding | 98.76 | |
| 1kij_A | 390 | DNA gyrase subunit B; topoisomerase, gyrase B-coum | 98.7 | |
| 2q2e_B | 621 | Type 2 DNA topoisomerase 6 subunit B; DNA-binding, | 98.55 | |
| 1s16_A | 390 | Topoisomerase IV subunit B; two-domain protein com | 98.5 | |
| 3cwv_A | 369 | DNA gyrase, B subunit, truncated; structural genom | 98.43 | |
| 4duh_A | 220 | DNA gyrase subunit B; structure-based drug design, | 98.39 | |
| 1ei1_A | 391 | DNA gyrase B, GYRB; ATPase domain, dimer, isomeras | 98.36 | |
| 4emv_A | 226 | DNA topoisomerase IV, B subunit; protein-inhibitor | 98.31 | |
| 1zxm_A | 400 | TOPO IIA ATPase, DNA topoisomerase II, alpha isozy | 98.3 | |
| 3lnu_A | 408 | Topoisomerase IV subunit B; PARE, ATP-binding, nuc | 98.0 | |
| 3ttz_A | 198 | DNA gyrase subunit B; protein-inhibitor complex, A | 97.64 | |
| 1pvg_A | 418 | DNA topoisomerase II; GHKL ATPase domain; HET: DNA | 97.54 | |
| 1th8_A | 145 | Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-s | 97.1 | |
| 3jz3_A | 222 | Sensor protein QSEC; helix-turn-helix, kinase doma | 97.05 | |
| 4ew8_A | 268 | Sensor protein DIVL; signal transduction, two-comp | 97.05 | |
| 2btz_A | 394 | Pyruvate dehydrogenase kinase isoenzyme 2; GHKL mo | 97.01 | |
| 2e0a_A | 394 | Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP | 96.93 | |
| 3d36_A | 244 | Sporulation kinase B; GHKL ATPase, four helix bund | 96.9 | |
| 3sl2_A | 177 | Sensor histidine kinase YYCG; ATP binding, intact | 96.88 | |
| 1y8o_A | 419 | [pyruvate dehydrogenase [lipoamide]] kinase isozy; | 96.87 | |
| 1gkz_A | 388 | [3-methyl-2-oxobutanoate dehydrogenase [lipoamide] | 96.79 | |
| 1ysr_A | 150 | Sensor-type histidine kinase PRRB; ATP-binding dom | 96.61 | |
| 4gfh_A | 1177 | DNA topoisomerase 2; topoisomerase, protein-DNA co | 96.57 | |
| 2q8g_A | 407 | [pyruvate dehydrogenase [lipoamide]] kinase isozy; | 96.48 | |
| 1id0_A | 152 | PHOQ histidine kinase; PHOQ/PHOP, signal transduct | 96.46 | |
| 1i58_A | 189 | Chemotaxis protein CHEA; beta-alpha sandwich, sign | 96.41 | |
| 3a0y_A | 152 | Sensor protein; ATP-LID, kinase, phosphoprotein, t | 96.16 | |
| 2c2a_A | 258 | Sensor histidine kinase; phosphotransfer, PHOQ, se | 95.93 | |
| 1bxd_A | 161 | ENVZ(290-450), protein (osmolarity sensor protein | 95.78 | |
| 3ehg_A | 128 | Sensor kinase (YOCF protein); GHL ATPase domain, t | 95.63 | |
| 1b3q_A | 379 | Protein (chemotaxis protein CHEA); histine kinase, | 95.44 | |
| 3ehh_A | 218 | Sensor kinase (YOCF protein); four-helix bundle, G | 95.37 | |
| 3zxq_A | 124 | Hypoxia sensor histidine kinase response regulato; | 95.22 | |
| 1r62_A | 160 | Nitrogen regulation protein NR(II); PII, histidine | 94.92 | |
| 3zxo_A | 129 | Redox sensor histidine kinase response regulator; | 94.71 | |
| 3a0r_A | 349 | Sensor protein; four helix bundle, PAS fold, kinas | 93.51 | |
| 4fpp_A | 247 | Phosphotransferase; four helix bundle, bergerat fo | 85.15 |
| >2cg9_A ATP-dependent molecular chaperone HSP82; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-164 Score=1417.10 Aligned_cols=647 Identities=44% Similarity=0.774 Sum_probs=560.7
Q ss_pred CcccchhhhHHHHHHHHHhcCCCCchhHHHHhHHhHHHHHHHHHhhccCCCcccCCCCCccEEEEEcCCCcEEEEEeCCC
Q 004444 95 LEKYEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRYLGVTEPELLKDAVDLDIRIQTDKDNGIITITDSGI 174 (753)
Q Consensus 95 ~e~~~Fq~d~~~ll~ll~~~LYs~~~vflRELIqNA~DA~~k~r~~~~~~~~~~~~~~~~~I~I~~d~~~~~l~I~DnGi 174 (753)
.|+|.||+|+++||+||+++||||+++|||||||||+||++++|++++++++......++.|+|.+++++++|+|+|||+
T Consensus 3 ~e~~~Fqae~~~Ll~li~~sLYsnkeifLRELIsNA~DA~~k~r~~~ltd~~~~~~~~~~~I~I~~d~~~~~I~I~DnGi 82 (677)
T 2cg9_A 3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGI 82 (677)
T ss_dssp CEEEECCCCHHHHHHHHHHSCCSCTTHHHHHHHHHHHHHHHHHHHHTSSCTTTTTTCCCCCEEEEEEGGGTEEEEEECSC
T ss_pred ccceehhhhHHHHHHHHHHhCCCCchHHHHHHhhCHHHHHHHHHHHhccChhhccCCCCcEEEEEEeCCCCEEEEEECCC
Confidence 48999999999999999999999999999999999999999999999999988877888999999998889999999999
Q ss_pred CCCHHHHHHHHhHhhhcchhhHHHHhhccccCCCCCCccccccchhheeecccCEEEEEEecCCCCCcEEEEeeCCCCce
Q 004444 175 GMTQQDLVDCLGTIAQSGTAKFLKAMKDSKDAGGDSNLIGQFGVGFYSAFLVSDRVVVETKSPKSDKQYVWEGEANASSY 254 (753)
Q Consensus 175 GMt~~el~~~l~tIa~Sg~~~f~~~~~~~~~~~~~~~~IGqFGIGf~S~F~vadkV~V~Tk~~~~~~~~~w~s~~~~~~y 254 (753)
|||++||.++|++||+||++.|+++++.+ .+...||||||||||+||||++|+|+|++.+ +.++.|+++++ +.|
T Consensus 83 GMt~edl~~~l~tIA~Sgt~~f~~kl~~~----~d~~~IGqFGvGFySaf~vadkV~V~Sk~~~-~~~~~W~s~g~-~~~ 156 (677)
T 2cg9_A 83 GMTKAELINNLGTIAKSGTKAFMEALSAG----ADVSMIGQFGVGFYSLFLVADRVQVISKSND-DEQYIWESNAG-GSF 156 (677)
T ss_dssp CCCHHHHHGGGSSSSSCTTHHHHSCCCSS----CCCCCCCCTTCTTGGGGGTEEEEEEEEECTT-SCEEEEEECSS-SEE
T ss_pred CCCHHHHHHHHHhHhccccHHHHHhhhcc----cchhhcCCCCchhHHHhhcCcEEEEEEccCC-CceEEEEEcCC-ceE
Confidence 99999999999999999999999887643 4678999999999999999999999999964 56999999998 999
Q ss_pred EEEecCCCCCCCCCccEEEEEecCCCcCCCCHHHHHHHHHHhcCCCCcCeEEeccccccccccCCCCcc---------cc
Q 004444 255 TIREETNPEKLLPRGTRLTLYLKHDDKGFAHPERIQKLVKNYSQFVSFPIYTWQEKGYTKEVEVDEDPA---------ET 325 (753)
Q Consensus 255 ~i~~~~~~~~~~~~GT~I~L~Lk~~~~~~~~~~~i~~lik~ys~fl~~PI~~~~~~~~~~~~~~~~~~~---------~~ 325 (753)
+|.+++.+ ...++||+|+|||++++.+|++.++|+++|++||+||+|||+++.+++.+++++++++++ ++
T Consensus 157 ti~~~~~~-~~~~~GT~I~L~Lk~d~~e~l~~~~i~~lvkkys~fi~~PI~l~~~k~~~~~~~~~e~~~~~~~~~~e~~~ 235 (677)
T 2cg9_A 157 TVTLDEVN-ERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYPIQLVVTKEVEKEVPIPEEEKKDEEKKDEEKK 235 (677)
T ss_dssp EEEECCSS-CCCSSEEEEEEEECTTGGGGGCHHHHHHHHHHHSTTCSSCEEECCCCCCCCC-------------------
T ss_pred EEeecCCC-CCCCCCeEEEEEEcchhhccccHHHHHHHHHHHHhhCCCCeEEeeccccccCcCcchhhhccccccccccc
Confidence 99985322 245899999999999999999999999999999999999999986554434432221100 00
Q ss_pred cccchh------hH-HHhhhcccceeeeeccccccccCCCCcccCCCCCCHHHHHHHHHHhhcCCCCCceeeeeecccce
Q 004444 326 NKDKQD------ET-AEKKKKTKTVVERYWDWELTNETQPIWLRNPKEVTTEEYNEFYKKTFNEYLDPLASSHFTTEGEV 398 (753)
Q Consensus 326 ~~~~~~------~~-~~~~~~~~~~~~~~~~~e~iN~~~piW~r~~~~v~~eey~~Fyk~~~~~~~~pl~~~h~~~eg~~ 398 (753)
+.++++ ++ ++++++++++++.+++|++||+++|||+|+|++||+|||.+|||+++++|++||+|+||++||++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~e~e~iN~~~plW~r~~~eit~eeY~~FYk~l~~d~~~pl~~~H~~veg~~ 315 (677)
T 2cg9_A 236 DEDDKKPKLEEVDEEEEKKPKTKKVKEEVQEIEELNKTKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQL 315 (677)
T ss_dssp --------------------------CCCCCBCCCCCCCCTTSSCGGGCCTTTHHHHHHHHTTCCSCCSEEEEEEECSSS
T ss_pred cccccccccccccchhhhcccccccccccccceecccCCCCcccCcccCCHHHHHHHHHHhcCCCCCchheEEecccccc
Confidence 000000 00 01234456667778899999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEEeeCCCCCCCccccCCCCcCeEEEeeeEEeecCCCCCCCcccccceeeeecCCCCCCcccHHhhcccHHHHHHH
Q 004444 399 EFRSILYVPAVAPMGKDDLINPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMR 478 (753)
Q Consensus 399 ~~~~llyiP~~~p~~~~~~~~~~~~~i~LYv~rVfI~d~~~~dllP~~l~FvkGVVDS~dLpLNvSRE~LQ~~~~l~~I~ 478 (753)
+|+||||||+++||++|++. ..+++|+||||||||+|+|+ +|||+||+||||||||+|||||||||+||+|++|++|+
T Consensus 316 ~~~~lLyiP~~ap~d~~~~~-~~~~~ikLYv~rVfI~d~~~-~llP~yL~FvkGVVDS~DLpLNvSRE~LQ~~~~lk~I~ 393 (677)
T 2cg9_A 316 EFRAILFIPKRAPFDLFESK-KKKNNIKLYVRRVFITDEAE-DLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIR 393 (677)
T ss_dssp CEEEEEEECSSCCC----------CCSEEEETTEEEEECST-TTSCGGGTTCEEEEEESSCCCCBTTTBCCCHHHHHHHH
T ss_pred eEEEEEEEcCCCchhhhhhh-hccCCeEEEEeeeEeecChh-hhchHHHHHheeecccCCCCcccCHHHhccCHHHHHHH
Confidence 99999999999999999742 45799999999999999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccCChHHHHHHHHHHhHHhhhcccCCccChhhccCccceeeccCCCcccCHHHHHhhcCCCCceE
Q 004444 479 KRLVRKAFDMILGISMSENRADYEKFWENFGKYLKMGCIDDRENHKPLAPLLRFFSSQSEDEMISLDEYVENMKPEQKDI 558 (753)
Q Consensus 479 ~~l~~kv~~~L~~la~~~d~e~y~~f~~~fg~~lK~G~~eD~~~~e~l~~LLrF~Ss~~~~~~~SL~eYv~rmk~~Qk~I 558 (753)
+.|++|++++|.+||+ ++++|++||++||.+||+|+++|..||++|++||||+||++.++++||+||++|||++|+.|
T Consensus 394 ~~l~kkvl~~l~~la~--~~e~y~~f~~~fg~~lK~G~~eD~~nr~~l~~llrf~ss~~~~~~~sL~eYv~rmke~Q~~I 471 (677)
T 2cg9_A 394 KNIVKKLIEAFNEIAE--DSEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNI 471 (677)
T ss_dssp HHHHHHHHHHHHHHHS--CSHHHHHHHHHHHHHHHHHHHHCSSSHHHHHTTCCBEESSCTTSCBCSTTHHHHSCTTCCEE
T ss_pred HHHHHHHHHHHHHHHh--CHHHHHHHHHHHhHHhhhhhccCHHHHHHHHhheEeeecCCCCceeeHHHHHHhccccCceE
Confidence 9999999999999995 68999999999999999999999999999999999999987778999999999999999999
Q ss_pred EEEecCCHHHHhcChhHHHhhhcCceEEEecCCCcHHHHHHhhhcCCcceEeccccccCcCCCchHHH--HhhHHHHHHH
Q 004444 559 YFIAADSVASARNTPFLEKLLEKDLEVLYLVDPIDEIAVQNLKSYKEKNFVDISKEDLDLGEKNEEKE--KVMKEEFGQT 636 (753)
Q Consensus 559 YY~~~~~~~~~~~sp~~E~~~~kg~eVL~l~dpiDE~~l~~L~~y~~~~f~~V~~~~l~l~~~~e~~~--~~~~~e~~~L 636 (753)
||++|+|++++++|||+|.|+++|||||||++||||+|+++|.+|+|++|++|+++ ++|++.+++++ ++.++++++|
T Consensus 472 yY~t~~s~~~~~~sp~~E~~~~kg~EVl~l~~~iDe~~~~~l~e~~gk~~~~v~k~-l~l~~~e~~~~~~~~~~~~~~~L 550 (677)
T 2cg9_A 472 YYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQLKEFEGKTLVDITKD-FELEETDEEKAEREKEIKEYEPL 550 (677)
T ss_dssp EEEECSCSTTTTTCGGGHHHHTTTCCEEEECSHHHHHHHGGGSCBTTBEEECSCCC-CCSCSSTTSSTTHHHHHGGGHHH
T ss_pred EEEeCCCHHHHHhCcHHHHHHhCCceEEEeCCchHHHHHHHHHHhCCceEEEeecc-cccccchhhhhhhhhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999 98876543332 4456789999
Q ss_pred HHHHHHHhCCceeEEEEeecCCCCCeEEEecCCCchHHHHHHHHHhccCCCCccccccCceeEEECCCChHHHHHHhhhc
Q 004444 637 CDWIKKRLGDKVASVQISNRLSSSPCVLVSAKFGWSANMERLMKAQTVGDTSSMEFMRGRRVFEINPEHPIIQNLNAASK 716 (753)
Q Consensus 637 ~~~lk~~L~~kV~~V~vS~rL~~sPa~lv~~e~g~s~~Merimkaq~~~~~~~~~~~~~k~~LEINp~HpLIk~L~~~~~ 716 (753)
|+|||++|+++|.+|++|+||++||||||++++|||++|+|||++|+++++.+.++|..+++|||||+||||++|..+..
T Consensus 551 ~~~~k~~L~~~v~~V~~s~rl~~sP~~lv~~~~~~s~~merimka~~~~d~~~~~~~~~k~~LeiNp~hpli~~L~~~~~ 630 (677)
T 2cg9_A 551 TKALKEILGDQVEKVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVD 630 (677)
T ss_dssp HHHHHHTTCSSCSCEECCSSCSSSCEEEECCTTSCCHHHHHHHTTCC-------------CEEEECTTCHHHHHHHHHHH
T ss_pred HHHHHHhcCCcceEEEEeccCCCCCEEEEeCcccccHHHHHHHHHhhccccccccccccCceEEEcCCCHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999998766655567778999999999999999998765
Q ss_pred CC-CCchhHHHHHHHHHHHHHHhCCCCCccHHHHHhhC
Q 004444 717 NC-PDDNDALRVVDLLYDAALVSSGFTVKSGRAWQQDI 753 (753)
Q Consensus 717 ~~-~~d~~~~~l~~~Lyd~AlL~~G~~~edp~~fa~ri 753 (753)
.+ ++++.++++|++|||+|+|++|+.++||+.|++||
T Consensus 631 ~d~~~~~~~~~~~~~Lyd~All~~G~~l~dp~~f~~ri 668 (677)
T 2cg9_A 631 EGGAQDKTVKDLTKLLYETALLTSGFSLDEPTSFASRI 668 (677)
T ss_dssp TCCSSCSSSSTTHHHHHHHHHHHTTCCCSSTTHHHHHH
T ss_pred ccccCHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHH
Confidence 54 45677999999999999999999999999999985
|
| >2o1u_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, AMP-PNP, GP96; HET: ANP; 2.40A {Canis lupus familiaris} PDB: 2o1v_A* 2o1w_A 2o1t_A | Back alignment and structure |
|---|
| >2ioq_A Chaperone protein HTPG; heat shock protein, HSP90; 3.50A {Escherichia coli} PDB: 2iop_A | Back alignment and structure |
|---|
| >1y4s_A Chaperone protein HTPG; HSP90, molecular chaperone, ATPase; HET: ADP; 2.90A {Escherichia coli} PDB: 1y4u_A | Back alignment and structure |
|---|
| >3hjc_A Heat shock protein 83-1; sleeping sickness, structura genomics, stress response protein, chaperone, structural GE consortium, SGC; 2.50A {Leishmania major} | Back alignment and structure |
|---|
| >3q6m_A Heat shock protein HSP 90-alpha; three domains, trimer of dimer, hexamer, chaperone; 3.00A {Homo sapiens} PDB: 3q6n_A | Back alignment and structure |
|---|
| >2cge_A ATP-dependent molecular chaperone HSP82; chaperone complex, heat shock protein, CO-chaperone, ATP-binding, heat shock; 3.0A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >1hk7_A Heat shock protein HSP82; ATPase, chaperone; 2.5A {Saccharomyces cerevisiae} SCOP: d.14.1.8 | Back alignment and structure |
|---|
| >2gq0_A Chaperone protein HTPG; molecular chaperone, HSP90, E. coli, hydrolase; 1.90A {Escherichia coli} | Back alignment and structure |
|---|
| >3pry_A Heat shock protein HSP 90-beta; structural genomics, structural genomics consortium, SGC, HE protein, chaperone; 2.28A {Homo sapiens} SCOP: d.14.1.8 | Back alignment and structure |
|---|
| >1usu_A Heat shock protein HSP82; chaperone/complex, chaperone, activator, HSP90; 2.15A {Saccharomyces cerevisiae} SCOP: d.14.1.8 PDB: 1usv_A | Back alignment and structure |
|---|
| >1y6z_A Heat shock protein, putative; chaperone, structural genomics, structural genom consortium, SGC, unknown function; 1.88A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >3peh_A Endoplasmin homolog; structural genomics, structural genomics consortium, SGC, HE protein, chaperone, ATP binding; HET: IBD; 2.75A {Plasmodium falciparum 3D7} PDB: 3pej_A* | Back alignment and structure |
|---|
| >3ied_A Heat shock protein; HSP90, chaperone, structural genomics, structura genomics consortium, SGC, stress response; HET: AN2; 2.01A {Plasmodium falciparum} | Back alignment and structure |
|---|
| >3nmq_A Heat shock protein HSP 90-beta; ATPase, chaperone-chaperone inhibitor complex; HET: 7PP; 2.20A {Homo sapiens} SCOP: d.122.1.1 | Back alignment and structure |
|---|
| >1qy5_A Endoplasmin; GRP94, NECA, HSP90, chaperone; HET: NEC; 1.75A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1qy8_A* 1qye_A* 1u0y_A* 1yt2_A* | Back alignment and structure |
|---|
| >3o0i_A HSP90AA1 protein; HSP90 heat-shock proteins, chaperone-inhibitor complex; HET: P54; 1.47A {Homo sapiens} PDB: 2fwz_A* 2fwy_A* 2h55_A* | Back alignment and structure |
|---|
| >3t0h_A Heat shock protein HSP 90-alpha; chaperone, ATPase; 1.20A {Homo sapiens} SCOP: d.122.1.1 PDB: 3r4m_A 3t0z_A* 3t10_A* 3t1k_A* 3t2s_A* 1uyl_A 1uy7_A* 1uy8_A* 1uy9_A* 1uyc_A* 1uyd_A* 1uye_A* 1uyf_A* 1uyg_A* 1uyh_A* 1uyk_A* 1uy6_A 2cdd_A* 2uwd_A* 2vci_A* ... | Back alignment and structure |
|---|
| >2gqp_A Endoplasmin; GRP94, HSP82, HSP90, HTPG, chaperone, ligand, NECA, NPCA, adenosine; HET: PA7 PG4 1PE; 1.50A {Canis lupus familiaris} SCOP: d.122.1.1 PDB: 1tc0_A* 1tbw_A* 1u0z_A* 1u2o_A* 1ysz_A* 1yt0_A* 1yt1_A* 2exl_A* 2fyp_A* 2gfd_A* 1tc6_A* 2h8m_A* 2hch_A* 2hg1_A* 3o2f_A* 2esa_A* | Back alignment and structure |
|---|
| >2wer_A ATP-dependent molecular chaperone HSP82; ATPase, ATP-binding, phosphoprotein, stress respo nucleotide-binding; HET: RDC; 1.60A {Saccharomyces cerevisiae} PDB: 2weq_A* 2wep_A* 1zwh_A* 1zw9_A* 2fxs_A* 3c11_A* 3c0e_A* 2yge_A* 2ygf_A* 2akp_A | Back alignment and structure |
|---|
| >1yc1_A HSP 86, heat shock protein HSP 90-alpha; cell-cycle, cancer, drug design, cell cycle; HET: 4BC; 1.70A {Homo sapiens} SCOP: d.122.1.1 PDB: 1yc3_A* 1yc4_A* | Back alignment and structure |
|---|
| >2ior_A Chaperone protein HTPG; heat shock protein, HSP90; HET: ADP; 1.65A {Escherichia coli} | Back alignment and structure |
|---|
| >1sf8_A Chaperone protein HTPG; four helix bundle dimerization interface, exposed amphipathic helix, three stranded beta sheet; 2.60A {Escherichia coli} SCOP: d.271.1.1 | Back alignment and structure |
|---|
| >1b63_A MUTL; DNA mismatch repair, ATPase; HET: ANP; 1.90A {Escherichia coli K12} SCOP: d.14.1.3 d.122.1.2 PDB: 1nhh_A* 1nhi_A* 1bkn_A 1nhj_A* 1b62_A* | Back alignment and structure |
|---|
| >1h7s_A PMS1 protein homolog 2; DNA repair, GHL ATPase, mismatch repair, HNPCC; 1.95A {Homo sapiens} SCOP: d.14.1.3 d.122.1.2 PDB: 1h7u_A* 1ea6_A* | Back alignment and structure |
|---|
| >3h4l_A DNA mismatch repair protein PMS1; ATP binding, DNA repair, DNA damage, nucleus, phosphop DNA binding protein, protein binding; HET: DNA ANP; 2.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3na3_A DNA mismatch repair protein MLH1; MUTL protein homolog 1, DNA damag repair, structural genomics consortium, SGC, protein bindin; HET: DNA ATP; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >1mu5_A Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae} SCOP: a.156.1.3 d.14.1.3 d.122.1.2 PDB: 1mx0_A* 1z5b_A* 1z5a_A* 1z59_A* 1z5c_A* 2hkj_A* | Back alignment and structure |
|---|
| >3fv5_A DNA topoisomerase 4 subunit B; topoisomerase IV B subunit complex, antibiotic resistance, ATP-binding, nucleotide-binding; HET: DNA 1EU; 1.80A {Escherichia coli} PDB: 1s14_A* | Back alignment and structure |
|---|
| >2zbk_B Type 2 DNA topoisomerase 6 subunit B; DNA binding protein, decatenation, ATPase, drug design, DNA-binding, magnesium, metal-binding; HET: RDC; 3.56A {Sulfolobus shibatae} | Back alignment and structure |
|---|
| >1kij_A DNA gyrase subunit B; topoisomerase, gyrase B-coumarin complex, isomerase; HET: DNA NOV; 2.30A {Thermus thermophilus} SCOP: d.14.1.3 d.122.1.2 | Back alignment and structure |
|---|
| >2q2e_B Type 2 DNA topoisomerase 6 subunit B; DNA-binding, SPO11, ATPase; 4.00A {Methanosarcina mazei} | Back alignment and structure |
|---|
| >1s16_A Topoisomerase IV subunit B; two-domain protein complexed with ADPNP; HET: ANP; 2.10A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 | Back alignment and structure |
|---|
| >3cwv_A DNA gyrase, B subunit, truncated; structural genomics, unknown function, B-subunit binding, isomerase, nucleotide-binding, topoisomerase; HET: DNA; 1.95A {Myxococcus xanthus} | Back alignment and structure |
|---|
| >4duh_A DNA gyrase subunit B; structure-based drug design, antibacterial, DNA gyrase B, GY isomerase-isomerase inhibitor complex; HET: DNA RLI; 1.50A {Escherichia coli} PDB: 1aj6_A* 1kzn_A* 3g7e_A* | Back alignment and structure |
|---|
| >1ei1_A DNA gyrase B, GYRB; ATPase domain, dimer, isomerase; HET: DNA ANP; 2.30A {Escherichia coli} SCOP: d.14.1.3 d.122.1.2 | Back alignment and structure |
|---|
| >4emv_A DNA topoisomerase IV, B subunit; protein-inhibitor complex, ATP binding, structure-based drug antimicrobial, virtual screen; HET: DNA 0R9; 1.70A {Streptococcus pneumoniae GA47373} PDB: 4em7_A* | Back alignment and structure |
|---|
| >1zxm_A TOPO IIA ATPase, DNA topoisomerase II, alpha isozyme; GHKL nucleotide-binding fold; HET: DNA ANP; 1.87A {Homo sapiens} PDB: 1zxn_A* | Back alignment and structure |
|---|
| >3lnu_A Topoisomerase IV subunit B; PARE, ATP-binding, nucleotide-BI topoisomerase; 2.20A {Xanthomonas oryzae PV} PDB: 3lps_A* | Back alignment and structure |
|---|
| >3ttz_A DNA gyrase subunit B; protein-inhibitor complex, ATP-binding, structure-based drug antimicrobial, isomerase-isomerase inhibitor complex; HET: DNA 07N; 1.63A {Staphylococcus aureus} PDB: 3u2d_A* 3u2k_A* 3g75_A* 3g7b_A* | Back alignment and structure |
|---|
| >1pvg_A DNA topoisomerase II; GHKL ATPase domain; HET: DNA ANP; 1.80A {Saccharomyces cerevisiae} SCOP: d.14.1.3 d.122.1.2 PDB: 1qzr_A* | Back alignment and structure |
|---|
| >1th8_A Anti-sigma F factor; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: d.122.1.3 PDB: 1thn_A* 1til_A* 1l0o_A* 1tid_A* | Back alignment and structure |
|---|
| >3jz3_A Sensor protein QSEC; helix-turn-helix, kinase domain, ATP-binding, cell inner MEM cell membrane, kinase, membrane, nucleotide-binding; 2.50A {Escherichia coli} | Back alignment and structure |
|---|
| >4ew8_A Sensor protein DIVL; signal transduction, two-component regulatory system, hiska GHKL domain, structural genomics; 2.50A {Caulobacter crescentus} | Back alignment and structure |
|---|
| >2btz_A Pyruvate dehydrogenase kinase isoenzyme 2; GHKL motif regulation, transferase; 2.2A {Homo sapiens} PDB: 2bu2_A* 2bu5_A* 2bu6_A* 2bu7_A* 2bu8_A* 3crk_A* 1jm6_A* 3crl_A* | Back alignment and structure |
|---|
| >2e0a_A Pyruvate dehydrogenase kinase isozyme 4; PDK4, ATP-binding, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: ANP; 1.86A {Homo sapiens} PDB: 2zdx_A* 2zdy_A* 2zkj_A* 3d2r_A* | Back alignment and structure |
|---|
| >3d36_A Sporulation kinase B; GHKL ATPase, four helix bundle, class I two-component histidine kinase, phosphoprotein; HET: ADP; 2.03A {Geobacillus stearothermophilus} | Back alignment and structure |
|---|
| >3sl2_A Sensor histidine kinase YYCG; ATP binding, intact ATP, bergerat fold, TR; HET: ATP; 1.61A {Bacillus subtilis} | Back alignment and structure |
|---|
| >1y8o_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: a.29.5.1 d.122.1.4 PDB: 1y8n_A* 1y8p_A* 2pnr_A* 2q8i_A* | Back alignment and structure |
|---|
| >1gkz_A [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase; transferase, mitochondrial protein kinase, potassium; HET: ADP; 2.2A {Rattus norvegicus} SCOP: a.29.5.1 d.122.1.4 PDB: 1gjv_A 1gkx_A* | Back alignment and structure |
|---|
| >1ysr_A Sensor-type histidine kinase PRRB; ATP-binding domain, structural genomics, mycobacterium tuberculosis structural proteomics project; 1.78A {Mycobacterium tuberculosis} SCOP: d.122.1.3 PDB: 1ys3_A | Back alignment and structure |
|---|
| >4gfh_A DNA topoisomerase 2; topoisomerase, protein-DNA complex, DNA supercoiling, DNA replication; HET: DNA PTR TSP ANP; 4.41A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >2q8g_A [pyruvate dehydrogenase [lipoamide]] kinase isozy; GHKL ATPase/kinase family, pyruvate dehydrogenase complex, mitochondrial kinase; HET: AZX; 1.90A {Homo sapiens} PDB: 2q8f_A* 2q8h_A | Back alignment and structure |
|---|
| >1id0_A PHOQ histidine kinase; PHOQ/PHOP, signal transduction, transferase; HET: ANP; 1.60A {Escherichia coli} SCOP: d.122.1.3 PDB: 3cgz_A 3cgy_A | Back alignment and structure |
|---|
| >1i58_A Chemotaxis protein CHEA; beta-alpha sandwich, signaling protein, transferase; HET: ACP ADP; 1.60A {Thermotoga maritima} SCOP: d.122.1.3 PDB: 1i59_A* 1i5a_A* 1i5b_A* 1i5c_A* 1i5d_A* | Back alignment and structure |
|---|
| >3a0y_A Sensor protein; ATP-LID, kinase, phosphoprotein, transferase, two-component regulatory system; 1.57A {Thermotoga maritima} PDB: 3a0t_A* 3a0x_A 3a0w_A 3a0z_A | Back alignment and structure |
|---|
| >2c2a_A Sensor histidine kinase; phosphotransfer, PHOQ, selenomethionyl MAD, two-component systems, transferase; HET: ADP; 1.9A {Thermotoga maritima} SCOP: a.30.2.1 d.122.1.3 PDB: 3dge_A* | Back alignment and structure |
|---|
| >1bxd_A ENVZ(290-450), protein (osmolarity sensor protein (ENVZ)); histidine kinase, osmosensor, His-Asp phosphorelay system, signal transduction; HET: ANP; NMR {Escherichia coli BL21} SCOP: d.122.1.3 | Back alignment and structure |
|---|
| >3ehg_A Sensor kinase (YOCF protein); GHL ATPase domain, transferase; HET: ATP; 1.74A {Bacillus subtilis} | Back alignment and structure |
|---|
| >1b3q_A Protein (chemotaxis protein CHEA); histine kinase, signal transduction, multi-domai protein, transferase; 2.60A {Thermotoga maritima} SCOP: a.30.2.1 b.40.7.1 d.122.1.3 PDB: 2ch4_A* 3ur1_A | Back alignment and structure |
|---|
| >3ehh_A Sensor kinase (YOCF protein); four-helix bundle, GHL ATPase domain, transferase; HET: MSE ADP; 2.10A {Bacillus subtilis} PDB: 3ehj_A* 3gie_A* 3gif_A* 3gig_A* 3ehf_A* | Back alignment and structure |
|---|
| >3zxq_A Hypoxia sensor histidine kinase response regulato; transferase; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >1r62_A Nitrogen regulation protein NR(II); PII, histidine kinase, two component system, transfera; 1.60A {Escherichia coli} SCOP: d.122.1.3 | Back alignment and structure |
|---|
| >3zxo_A Redox sensor histidine kinase response regulator; transferase; HET: MSE; 1.90A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
| >3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima} | Back alignment and structure |
|---|
| >4fpp_A Phosphotransferase; four helix bundle, bergerat fold, CCKA, CTRA, CPDR, bacterial cytoplasme; 2.20A {Caulobacter crescentus} PDB: 4fmt_A | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 753 | ||||
| d1usua_ | 256 | d.14.1.8 (A:) Heat shock protein hsp82 {Baker's ye | 7e-86 | |
| d2gqpa1 | 227 | d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) | 4e-62 | |
| d1uyla_ | 208 | d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: | 3e-60 | |
| d2iwxa1 | 213 | d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharo | 5e-57 | |
| d1sf8a_ | 115 | d.271.1.1 (A:) Chaperone protein HtpG {Escherichia | 3e-25 | |
| d2hkja3 | 219 | d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {A | 2e-04 |
| >d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 256 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ribosomal protein S5 domain 2-like superfamily: Ribosomal protein S5 domain 2-like family: Hsp90 middle domain domain: Heat shock protein hsp82 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 269 bits (690), Expect = 7e-86
Identities = 121/259 (46%), Positives = 179/259 (69%), Gaps = 4/259 (1%)
Query: 356 TQPIWLRNPKEVTTEEYNEFYKKTFNEYLDPLASSHFTTEGEVEFRSILYVPAVAPMGKD 415
T+P+W RNP ++T EEYN FYK N++ DPL HF+ EG++EFR+IL++P AP
Sbjct: 2 TKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLF 61
Query: 416 DLINPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVR 475
+ K NI+LYV+RVFI+D+ + +L P +LSFVKGVVDS DLPLN+SRE+LQ+++I++
Sbjct: 62 ES-KKKKNNIKLYVRRVFITDEAE-DLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMK 119
Query: 476 IMRKRLVRKAFDMILGISMSENRADYEKFWENFGKYLKMGCIDDRENHKPLAPLLRFFSS 535
++RK +V+K + ++E+ +EKF+ F K +K+G +D +N LA LLR+ S+
Sbjct: 120 VIRKNIVKKLIEAF--NEIAEDSEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNST 177
Query: 536 QSEDEMISLDEYVENMKPEQKDIYFIAADSVASARNTPFLEKLLEKDLEVLYLVDPIDEI 595
+S DE+ SL +YV M QK+IY+I +S+ S +PFL+ L K+ EVL+L DPIDE
Sbjct: 178 KSVDELTSLTDYVTRMPEHQKNIYYITGESLKSVEKSPFLDALKAKNFEVLFLTDPIDEY 237
Query: 596 AVQNLKSYKEKNFVDISKE 614
A LK ++ K VDI+K+
Sbjct: 238 AFTQLKEFEGKTLVDITKD 256
|
| >d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} Length = 227 | Back information, alignment and structure |
|---|
| >d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} Length = 208 | Back information, alignment and structure |
|---|
| >d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 213 | Back information, alignment and structure |
|---|
| >d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} Length = 115 | Back information, alignment and structure |
|---|
| >d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]} Length = 219 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 753 | |||
| d1usua_ | 256 | Heat shock protein hsp82 {Baker's yeast (Saccharom | 100.0 | |
| d2gqpa1 | 227 | HSP90 {Dog (Canis familiaris) [TaxId: 9615]} | 100.0 | |
| d2iwxa1 | 213 | HSP90 {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1uyla_ | 208 | HSP90 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1sf8a_ | 115 | Chaperone protein HtpG {Escherichia coli [TaxId: 5 | 99.96 | |
| d1h7sa2 | 203 | DNA mismatch repair protein PMS2 {Human (Homo sapi | 99.32 | |
| d2hkja3 | 219 | Topoisomerase VI-B subunit {Archaeon Sulfolobus sh | 99.23 | |
| d1b63a2 | 218 | DNA mismatch repair protein MutL {Escherichia coli | 99.08 | |
| d1pvga2 | 239 | DNA topoisomerase II {Baker's yeast (Saccharomyces | 98.0 | |
| d1kija2 | 212 | DNA gyrase B {Thermus thermophilus [TaxId: 274]} | 97.69 | |
| d1ei1a2 | 219 | DNA gyrase B {Escherichia coli [TaxId: 562]} | 97.57 | |
| d1y8oa2 | 125 | Pyruvate dehydrogenase kinase {Human (Homo sapiens | 97.32 | |
| d1gkza2 | 193 | Branched-chain alpha-ketoacid dehydrogenase kinase | 97.29 | |
| d1jm6a2 | 190 | Pyruvate dehydrogenase kinase {Rat (Rattus norvegi | 97.18 | |
| d1ysra1 | 148 | Sensor-type histidine kinase PrrB {Mycobacterium t | 96.98 | |
| d1bxda_ | 161 | Histidine kinase domain of the osmosensor EnvZ {Es | 96.89 | |
| d1th8a_ | 139 | Anti-sigma factor spoIIab {Bacillus stearothermoph | 96.84 | |
| d1id0a_ | 146 | Histidine kinase PhoQ domain {Escherichia coli [Ta | 96.82 | |
| d2c2aa2 | 161 | Sensor histidine kinase TM0853 {Thermotoga maritim | 96.74 | |
| d1s14a_ | 168 | Topoisomerase IV subunit B {Escherichia coli [TaxI | 95.3 | |
| d1ixma_ | 179 | Sporulation response regulatory protein Spo0B {Bac | 94.49 | |
| d1r62a_ | 156 | Nitrogen regulation protein NtrB, C-terminal domai | 88.55 |
| >d1usua_ d.14.1.8 (A:) Heat shock protein hsp82 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Ribosomal protein S5 domain 2-like superfamily: Ribosomal protein S5 domain 2-like family: Hsp90 middle domain domain: Heat shock protein hsp82 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=6.1e-83 Score=660.88 Aligned_cols=255 Identities=48% Similarity=0.873 Sum_probs=239.6
Q ss_pred CCCCcccCCCCCCHHHHHHHHHHhhcCCCCCceeeeeecccceeeEEEEEeeCCCCCCCccccCCCCcCeEEEeeeEEee
Q 004444 356 TQPIWLRNPKEVTTEEYNEFYKKTFNEYLDPLASSHFTTEGEVEFRSILYVPAVAPMGKDDLINPKTKNIRLYVKRVFIS 435 (753)
Q Consensus 356 ~~piW~r~~~~v~~eey~~Fyk~~~~~~~~pl~~~h~~~eg~~~~~~llyiP~~~p~~~~~~~~~~~~~i~LYv~rVfI~ 435 (753)
++|||+|++++||+|||++||+++++++++||+|+||++||+++|+||||||+.+|+++|+.. ..++||+||||||||+
T Consensus 2 tkpiW~r~~~eit~eeY~~FYk~l~~~~~~Pl~~iH~~~eg~~~~~~lLyiP~~~p~~~~~~~-~~~~~ikLY~~rVfI~ 80 (256)
T d1usua_ 2 TKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFESK-KKKNNIKLYVRRVFIT 80 (256)
T ss_dssp CCCGGGSCGGGCCHHHHHHHHHHHHCCSSCCSEEEEEEECSSSCEEEEEEECSSCCTTTTCC-----CCEEEEETTEEEE
T ss_pred CCCCccCCchhCCHHHHHHHHHhhcCCccCCceeEEeeeeeeEEEEEEEEecccCcchhhhhh-hhcCCeEEEEEeeeec
Confidence 679999999999999999999999999999999999999999999999999999999998753 4568999999999999
Q ss_pred cCCCCCCCcccccceeeeecCCCCCCcccHHhhcccHHHHHHHHHHHHHHHHHHHhhhccCChHHHHHHHHHHhHHhhhc
Q 004444 436 DDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGISMSENRADYEKFWENFGKYLKMG 515 (753)
Q Consensus 436 d~~~~dllP~~l~FvkGVVDS~dLpLNvSRE~LQ~~~~l~~I~~~l~~kv~~~L~~la~~~d~e~y~~f~~~fg~~lK~G 515 (753)
|+|+ +|||+||+||||||||+|||||||||+||+|+++++|++.|++||+++|++++ +|+++|++||++||.+||+|
T Consensus 81 d~~~-~llP~~L~FvkGVVDS~DlpLNVSRE~LQ~~~~l~kI~~~i~kkv~~~L~~~~--~d~eky~~fw~~fg~~lK~G 157 (256)
T d1usua_ 81 DEAE-DLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIRKNIVKKLIEAFNEIA--EDSEQFEKFYSAFSKNIKLG 157 (256)
T ss_dssp SCCT-TSSCGGGTTCEEEEEESSCCSCC------CCHHHHHHHHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHH
T ss_pred cchh-hHHHHHHHHhhhccccccCCcccchhhhcccHHHHHHHHHHHHHHHHHHHHhh--hCHHHHHHHHHHHhHHHhhh
Confidence 9999 99999999999999999999999999999999999999999999999999887 68999999999999999999
Q ss_pred ccCCccChhhccCccceeeccCCCcccCHHHHHhhcCCCCceEEEEecCCHHHHhcChhHHHhhhcCceEEEecCCCcHH
Q 004444 516 CIDDRENHKPLAPLLRFFSSQSEDEMISLDEYVENMKPEQKDIYFIAADSVASARNTPFLEKLLEKDLEVLYLVDPIDEI 595 (753)
Q Consensus 516 ~~eD~~~~e~l~~LLrF~Ss~~~~~~~SL~eYv~rmk~~Qk~IYY~~~~~~~~~~~sp~~E~~~~kg~eVL~l~dpiDE~ 595 (753)
|++|.+|++++++||||+||.++++++||+||++||+++|+.|||++|++++++++|||+|+|+++|||||||+|||||+
T Consensus 158 ~~~D~~~~e~l~~ll~f~ss~s~~e~~SL~eYvermke~Qk~IyYi~~~s~~~~~~sP~lE~~k~kg~EVL~l~dpiDe~ 237 (256)
T d1usua_ 158 VHEDTQNRAALAKLLRYNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKSVEKSPFLDALKAKNFEVLFLTDPIDEY 237 (256)
T ss_dssp HHHCTTTHHHHHTTCEEEETTEEEEEEEHHHHHHTSCTTCCEEEEEECSSHHHHHTCTTHHHHHHTTCCEEEECSHHHHH
T ss_pred ccccHHHHHHHHHhhhhhccCCCcceeeHHHHHhhccccccceEEEecCCHHHHHcCHHHHHHHHCCCEEEEecCchHHH
Confidence 99999999999999999999877899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhcCCcceEecccc
Q 004444 596 AVQNLKSYKEKNFVDISKE 614 (753)
Q Consensus 596 ~l~~L~~y~~~~f~~V~~~ 614 (753)
|+++|.+|+|++|++|+++
T Consensus 238 ~i~~l~e~~~kkf~sV~ke 256 (256)
T d1usua_ 238 AFTQLKEFEGKTLVDITKD 256 (256)
T ss_dssp HHHHHCEETTEEEEETTCC
T ss_pred HHHHHHHhCCCceeecCCC
Confidence 9999999999999999874
|
| >d2gqpa1 d.122.1.1 (A:74-337) HSP90 {Dog (Canis familiaris) [TaxId: 9615]} | Back information, alignment and structure |
|---|
| >d2iwxa1 d.122.1.1 (A:2-214) HSP90 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1uyla_ d.122.1.1 (A:) HSP90 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1sf8a_ d.271.1.1 (A:) Chaperone protein HtpG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1h7sa2 d.122.1.2 (A:29-231) DNA mismatch repair protein PMS2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2hkja3 d.122.1.2 (A:10-228) Topoisomerase VI-B subunit {Archaeon Sulfolobus shibatae [TaxId: 2286]} | Back information, alignment and structure |
|---|
| >d1pvga2 d.122.1.2 (A:7-245) DNA topoisomerase II {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1kija2 d.122.1.2 (A:9-220) DNA gyrase B {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d1ei1a2 d.122.1.2 (A:2-220) DNA gyrase B {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1y8oa2 d.122.1.4 (A:177-301) Pyruvate dehydrogenase kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1gkza2 d.122.1.4 (A:186-378) Branched-chain alpha-ketoacid dehydrogenase kinase (BCK) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1jm6a2 d.122.1.4 (A:1177-1366) Pyruvate dehydrogenase kinase {Rat (Rattus norvegicus), isozyme 2 [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1ysra1 d.122.1.3 (A:299-446) Sensor-type histidine kinase PrrB {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1bxda_ d.122.1.3 (A:) Histidine kinase domain of the osmosensor EnvZ {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1th8a_ d.122.1.3 (A:) Anti-sigma factor spoIIab {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
| >d1id0a_ d.122.1.3 (A:) Histidine kinase PhoQ domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d2c2aa2 d.122.1.3 (A:321-481) Sensor histidine kinase TM0853 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
| >d1s14a_ d.122.1.2 (A:) Topoisomerase IV subunit B {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1ixma_ d.123.1.1 (A:) Sporulation response regulatory protein Spo0B {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1r62a_ d.122.1.3 (A:) Nitrogen regulation protein NtrB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|