Citrus Sinensis ID: 004504

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------75
Protein Sequence
MTVFSVRQVVPVDYEAEVSQRLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEVVLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHRKDIRMLGSEGVLRWGNSRRRNVICREAKLGPSPAFQKNRRGKGDVNEPGVFHIVTTKNNEVHFVCQGGLEMAELWVRGIMLVTKAAMHG
Secondary Structure (PSIPRED)
cEEEcccccccccccccHHHHHHHHHHcccHHHHHHHHHcccccccHHHHHccccHHHHHHHHcccccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccHHHHHHHHHccHHHHHHHHHccccccccccHHHHHHHcccHHHHHHHHccccccccccccHHHHHHHcccHHHHHHHHHcccccccccHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHccccccHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHccccccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccccHHHHHccHHHHHHHHHHcccccccccccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHccccHHHHHHHHHHHccccccHHHHHcccHHHHHHHHHcccccHHccccc
Secondary Structure Prediction (SSPRO)
ccHHHccccccccccccccHHHHHHHHcccHHHHHHHHHHcccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHccHHHHHHHHHHcccccccccccccHHHHHHcccHHHHHHHHHccccccccccHHHHHHHcccHHHHHHHHHcccccccccccHHHHHHHcccHHHHHHHHHccccccHHHHcccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHcccccHHHHHHHcccHHHHHHHHHccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHHcccccccccccccHHHHHHHccccccHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHHHcccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHHccccHHHHHHHHHcccccccccccccccHHHHHHHccccHHHHHcccccccccccHHHHHHHccHHHHHHHHHcccccccccccc
Coil and Loop (DISEMBL)
mtvfsvrqvvpvdyEAEVSQRLLEATLAgdlksateciadpyvdvnFVGAVSlktrktevvlregkpsevRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLmgsdlirphVAVHSLVTACCRGFVDVVDTLMKcgvdinatDRLLLQslkpslhtnvDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGawswdtttgeefrvgaglaepyAITWCAVEYFEITGSILRMLLQHLsynsphygrtlLHHAILCGCTGAVAVLLScgadaqcpirtqktefhpihLAARLGYSTIVQSLIdsgcdlntktesgETALMISAKYKQEECVKVLAKAGAdfglvsvsgqsassiagsnwwsVGFQRAVLDIirsgnipkssnvavfspLMFVAQAGDIAALKALIGReelnldyqddngFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKgnrnaggfyALHCAARRGDLDAVRLLTsrgygvnvpdgdgytplMLAAREGHGPMCELLISngavcdiknaRGETALSLARknssmkndaELVILDEVARMLVLGgghvlkhtkggkgtphrkdirmlgsegvlrwgnsrrrnvicreaklgpspafqknrrgkgdvnepgvFHIVttknnevhFVCQGGLEMAELWVRGIMLVTKAAMHG
Flexible Loop (DISEMBL)
mtvfsvrqvvpvdyeAEVSQRLLEATLAGDLKSAteciadpyvdvNFVGavslktrktevvlregkpsevrveFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLqagantdmkvRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSrgygvnvpdgdgYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALslarknssmkndAELVILDEVARMLVLGGghvlkhtkggkgtphrkdirmlgsegvlrwgnsrrrnvicreaklgpspafqknrrgkgdvnePGVFHIVTTKNNEVHFVCQGGLEMAELWVRGIMLVTKAAMHG
Low Complexity Region (SEG)
MTVFSVRQVVPVDYEAEVSQRLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEVVLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCsalvaavvsrqvsvvqlllqaGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHRKDIRMLGSEGVLRWGNSRRRNVICREAKLGPSPAFQKNRRGKGDVNEPGVFHIVTTKNNEVHFVCQGGLEMAELWVRGIMLVTKAAMHG
Disordered region (IsUnstruct)
***FSVRQVVPVDYEAEVSQRLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEVVLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETA*************AELVILDEVARMLVLGGGHVLKHTK**********IRMLGSEGVLRWGNSRRRNVICRE*********************PGVFHIVTTKNNEVHFVCQGGLEMAELWVRGIMLVTK*****
Disordered Region (DISOPRED)
MTVFSVRQVVPVDYEAEVSQRLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEVVLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHRKDIRMLGSEGVLRWGNSRRRNVICREAKLGPSPAFQKNRRGKGDVNEPGVFHIVTTKNNEVHFVCQGGLEMAELWVRGIMLVT***MH*
Disordered Region (DISEMBL)
MTVFSVRQVVPVDYEAEVSQRLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEVVLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLK*********HRKDIRMLGSEGVLRWGNSRRRNVICREAKLGPSPAFQKNRRGKGDVNEPGVFHIVTTKNNEVHFVCQGGLEMAELWVRGIMLVTKAAMHG
Disordered Region (DISPRO)
*T***VRQVVPVDYEAEVSQRLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEVVLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHRKDIRMLGSEGVLRWGNSRRRNVICREAKLGPSPAFQKNRRGKGDVNEPGVFHIVTTKNNEVHFVCQGGLEMAELWVRGIM*********
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
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TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTVFSVRQVVPVDYEAEVSQRLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEVVLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHRKDIRMLGSEGVLRWGNSRRRNVICREAKLGPSPAFQKNRRGKGDVNEPGVFHIVTTKNNEVHFVCQGGLEMAELWVRGIMLVTKAAMHG
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	748	2.2.26 [Sep-21-2011]
Q12955	4377	Ankyrin-3 OS=Homo sapiens	no	no	0.808	0.138	0.271	8e-29
G5E8K5	1961	Ankyrin-3 OS=Mus musculus	no	no	0.786	0.299	0.263	2e-28
Q02357	1862	Ankyrin-1 OS=Mus musculus	no	no	0.618	0.248	0.258	1e-27
P16157	1881	Ankyrin-1 OS=Homo sapiens	no	no	0.705	0.280	0.249	3e-27
Q01484	3957	Ankyrin-2 OS=Homo sapiens	no	no	0.667	0.126	0.247	7e-27
Q8C8R3	3898	Ankyrin-2 OS=Mus musculus	no	no	0.667	0.128	0.244	4e-26
Q4UMH6	1179	Putative ankyrin repeat p	yes	no	0.641	0.407	0.281	4e-26
Q9ULJ7	1429	Ankyrin repeat domain-con	no	no	0.639	0.334	0.264	4e-23
Q5F478	990	Serine/threonine-protein	no	no	0.529	0.4	0.272	1e-22
Q8Q0U0	360	Putative ankyrin repeat p	yes	no	0.304	0.633	0.298	6e-22

>sp|Q12955|ANK3_HUMAN Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3

 Score =  129 bits (324), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 193/711 (27%), Positives = 286/711 (40%), Gaps = 106/711 (14%)

Query: 23  LEATLAGDLKSATECIADPYVDVNF-----VGAVSLKTRKTEV-VLREGKPSEVRVEFEE 76
           L A  AG L+ A + I +  VD+N      + A+ L +++  V V+ E    E  V+   
Sbjct: 46  LRAARAGHLEKALDYIKN-GVDINICNQNGLNALHLASKEGHVEVVSELLQREANVDAAT 104

Query: 77  FKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFAT-TIAVREGHLEILEILLKAG 135
            K + TAL +A+ +G   +VK L++ GA+VN +   GF    +A +E HLE+++ LL  G
Sbjct: 105 KKGN-TALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEVVKFLLDNG 163

Query: 136 ASQPACEE----ALLEASCHGQARLAELLMGSD------LIRPHVAVHSLVTACCRGFV- 184
           ASQ    E     L  A   G  ++  LL+ +D      L   H+A     T      + 
Sbjct: 164 ASQSLATEDGFTPLAVALQQGHDQVVSLLLENDTKGKVRLPALHIAARKDDTKAAALLLQ 223

Query: 185 --DVVDTLMKCGV----------DINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSV 232
             +  D   K G           +IN    LL ++         D + L  A      ++
Sbjct: 224 NDNNADVESKSGFTPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPLHVASKRGNANM 283

Query: 233 VQLLLQAGANTDMKVRLGAWSWD--TTTGEEFRVGAGLAEPYAI-----TWCAVEYFEIT 285
           V+LLL  GA  D K R G         +G E  V   L     I        +  +    
Sbjct: 284 VKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRAAPILSKTKNGLSPLHMATQ 343

Query: 286 GSIL---RMLLQHLSYNSP-----HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQ 337
           G  L   ++LLQH   N P     +   T LH A  CG      VLL   A+        
Sbjct: 344 GDHLNCVQLLLQH---NVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKANPNAKALNG 400

Query: 338 KTEFH------------------------------PIHLAARLGYSTIVQSLIDSGCDLN 367
            T  H                              PIH+AA +G+  IV  L+  G   N
Sbjct: 401 FTPLHIACKKNRIKVMELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPN 460

Query: 368 TKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVL 427
           T    GETAL ++A+  Q E V+ L + GA     +   Q+   I+      +G    V 
Sbjct: 461 TTNVRGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHISA----RLGKADIVQ 516

Query: 428 DIIRSGNIPKSSNVAVFSPLMFVAQAG--DIAALKALIGREELNLDYQDDNGFSAVMVAA 485
            +++ G  P ++  + ++PL   A+ G  D+AA     G    +L      GF+ + VAA
Sbjct: 517 QLLQQGASPNAATTSGYTPLHLSAREGHEDVAAFLLDHG---ASLSITTKKGFTPLHVAA 573

Query: 486 SKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNA--- 542
             G +EV   L+   A      KSG T + ++    N    +KV L    +  + +A   
Sbjct: 574 KYGKLEVANLLLQKSASPDAAGKSGLTPLHVAAHYDN----QKVALLLLDQGASPHAAAK 629

Query: 543 GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV 602
            G+  LH AA++  +D    L   G   N     G   + LAA+EGH  M  LL+   A 
Sbjct: 630 NGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLLGRNAN 689

Query: 603 CDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGG 653
            ++ N  G T L LA +   +           VA +LV  G HV   TK G
Sbjct: 690 VNLSNKSGLTPLHLAAQEDRVN----------VAEVLVNQGAHVDAQTKMG 730

Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments.
Homo sapiens (taxid: 9606)

>sp|G5E8K5|ANK3_MOUSE Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1

 Score =  128 bits (322), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 187/709 (26%), Positives = 279/709 (39%), Gaps = 121/709 (17%)

Query: 15  EAEVSQRLLEATLAGDLKSATECIADPYVDVNF-----VGAVSLKTRKTEV-VLREGKPS 68
           +++ +   L A  AG L+ A + I +  VDVN      + A+ L +++  V V+ E    
Sbjct: 21  KSDANASYLRAARAGHLEKALDYIKN-GVDVNICNQNGLNALHLASKEGHVEVVSELLQR 79

Query: 69  EVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFAT-TIAVREGHLEI 127
           E  V+    K + TAL +A+ +G   +VK L++ GA+VN +   GF    +A +E HLE+
Sbjct: 80  EANVDAATKKGN-TALHIASLAGQAEVVKVLVTNGANVNAQSQNGFTPLYMAAQENHLEV 138

Query: 128 LEILLKAGASQPACEE----ALLEASCHGQARLAELLMGSD------LIRPHVAVHSLVT 177
           +  LL  GASQ    E     L  A   G  ++  LL+ +D      L   H+A     T
Sbjct: 139 VRFLLDNGASQSLATEDGFTPLAVALQQGHDQVVSLLLENDTKGKVRLPALHIAARKDDT 198

Query: 178 ACCRGFVDV---VDTLMKCGV----------DINATDRLLLQSLKPSLHTNVDCSALVAA 224
                 +      D   K G           +IN    LL ++         D + L  A
Sbjct: 199 KAAALLLQNDTNADVESKSGFTPLHIAAHYGNINVATLLLNRAAAVDFTARNDITPLHVA 258

Query: 225 VVSRQVSVVQLLLQAGANTDMKVRLGAWSWD--TTTGEEFRVGAGLAEPYAI-----TWC 277
                 ++V+LLL  GA  D K R G         +G E  V   L     I        
Sbjct: 259 SKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGHEQVVEMLLDRSAPILSKTKNGL 318

Query: 278 AVEYFEITGSIL---RMLLQHLSYNSP-----HYGRTLLHHAILCGCTGAVAVLLSCGAD 329
           +  +    G  L   ++LLQH   N P     +   T LH A  CG      VLL   A 
Sbjct: 319 SPLHMATQGDHLNCVQLLLQH---NVPVDDVTNDYLTALHVAAHCGHYKVAKVLLDKKAS 375

Query: 330 AQCPIRTQKTEFH------------------------------PIHLAARLGYSTIVQSL 359
                    T  H                              PIH+AA +G+  IV  L
Sbjct: 376 PNAKALNGFTPLHIACKKNRIRVMELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQL 435

Query: 360 IDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWS 419
           +  G   NT    GETAL ++A+  Q E V+ L + GA     +   Q+   I+      
Sbjct: 436 MHHGASPNTTNVRGETALHMAARSGQAEVVRYLVQDGAQVEAKAKDDQTPLHISAR---- 491

Query: 420 VGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAG--DIAALKALIGREELNLDYQDDNG 477
           +G    V  +++ G  P ++  + ++PL   A+ G  D+AA     G    +L      G
Sbjct: 492 LGKADIVQQLLQQGASPNAATTSGYTPLHLAAREGHEDVAAFLLDHG---ASLSITTKKG 548

Query: 478 FSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSEL--NQNCDLF--------- 526
           F+ + VAA  G +EV   L+   A      KSG T + ++    NQ   L          
Sbjct: 549 FTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASPH 608

Query: 527 ---------------------EKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTS 565
                                   +LE+  +       G  ++H AA+ G +D V LL S
Sbjct: 609 AAAKNGYTPLHIAAKKNQMDIATSLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLLS 668

Query: 566 RGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETAL 614
           R   VN+ +  G TPL LAA+E    + E+L++ GA  D +   G T L
Sbjct: 669 RNANVNLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAHVDAQTKMGYTPL 717

Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments (By similarity). In skeletal muscle, required for costamere localization of DMD and betaDAG1.

Mus musculus (taxid: 10090)

>sp|Q02357|ANK1_MOUSE Ankyrin-1 OS=Mus musculus GN=Ank1 PE=1 SV=2

 Score =  125 bits (314), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 140/541 (25%), Positives = 233/541 (43%), Gaps = 78/541 (14%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFAT-TIAVREGHLEILEILLKAGASQPA 140
           TAL +AA +G   +V++L++ GA+VN +  +GF    +A +E HLE+++ LL+ GA+Q  
Sbjct: 76  TALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEVVKFLLENGANQNV 135

Query: 141 CEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINAT 200
             E                    D   P      L  A  +G  +VV  L+  G      
Sbjct: 136 ATE--------------------DGFTP------LAVALQQGHENVVAHLINYGT--KGK 167

Query: 201 DRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGE 260
            RL      P+LH          A  +       +LLQ   N D+  + G          
Sbjct: 168 VRL------PALHI---------AARNDDTRTAAVLLQNDPNPDVLSKTG---------- 202

Query: 261 EFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQH-LSYN-SPHYGRTLLHHAILCGCTG 318
                      +     A  Y  +  ++ ++LL    S N +P  G T LH A   G   
Sbjct: 203 -----------FTPLHIAAHYENL--NVAQLLLNRGASVNFTPQNGITPLHIASRRGNVI 249

Query: 319 AVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALM 378
            V +LL  G  AQ   RT K E  P+H AAR G+  I + L+D G  +  KT++G + + 
Sbjct: 250 MVRLLLDRG--AQIETRT-KDELTPLHCAARNGHVRISEILLDHGAPIQAKTKNGLSPIH 306

Query: 379 ISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKS 438
           ++A+    +CV++L +  A+   +++   +   +A       G  R    ++  G  P S
Sbjct: 307 MAAQGDHLDCVRLLLQYNAEIDDITLDHLTPLHVAA----HCGHHRVAKVLLDKGAKPNS 362

Query: 439 SNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVY 498
             +  F+PL    +   I  ++ L+ +   ++D   ++G + + VA+  GH+ + + L+ 
Sbjct: 363 RALNGFTPLHIACKKNHIRVMELLL-KTGASIDAVTESGLTPLHVASFMGHLPIVKNLLQ 421

Query: 499 AGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLD 558
            GA   + N   +T + ++    + ++  K +L+   +   +       LHCAAR G   
Sbjct: 422 RGASPNVSNVKVETPLHMAARAGHTEV-AKYLLQNKAKANAKAKDDQTPLHCAARIGHTG 480

Query: 559 AVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLAR 618
            V+LL   G   N+    G+TPL  AAREGH      L+   A       +G T L +A 
Sbjct: 481 MVKLLLENGASPNLATTAGHTPLHTAAREGHVDTALALLEKEASQACMTKKGFTPLHVAA 540

Query: 619 K 619
           K
Sbjct: 541 K 541

Attaches integral membrane proteins to cytoskeletal elements; binds to the erythrocyte membrane protein band 4.2, to Na-K ATPase, to the lymphocyte membrane protein GP85, and to the cytoskeletal proteins fodrin, tubulin, vimentin and desmin. Erythrocyte ankyrins also link spectrin (beta chain) to the cytoplasmic domain of the erythrocytes anion exchange protein; they retain most or all of these binding functions. In skeletal muscle, isoform Mu7 together with obscurin may provide a molecular link between the sarcoplasmic reticulum and myofibrils.

Mus musculus (taxid: 10090)

>sp|P16157|ANK1_HUMAN Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3

 Score =  124 bits (310), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 153/614 (24%), Positives = 268/614 (43%), Gaps = 86/614 (14%)

Query: 15  EAEVSQRLLEATLAGDLKSATECIADPYVDVNF-----VGAVSLKTRKTEV-VLREGKPS 68
           EA+ +   L A  +G+L  A + + +  VD+N      +  + L +++  V ++ E    
Sbjct: 9   EADAATSFLRAARSGNLDKALDHLRN-GVDINTCNQNGLNGLHLASKEGHVKMVVELLHK 67

Query: 69  EVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFAT-TIAVREGHLEI 127
           E+ +E    K + TAL +AA +G   +V++L++ GA+VN +  +GF    +A +E HLE+
Sbjct: 68  EIILETTTKKGN-TALHIAALAGQDEVVRELVNYGANVNAQSQKGFTPLYMAAQENHLEV 126

Query: 128 LEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVV 187
           ++ LL+ GA+Q    E                    D   P      L  A  +G  +VV
Sbjct: 127 VKFLLENGANQNVATE--------------------DGFTP------LAVALQQGHENVV 160

Query: 188 DTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKV 247
             L+  G       RL      P+LH          A  +       +LLQ   N D+  
Sbjct: 161 AHLINYGT--KGKVRL------PALHI---------AARNDDTRTAAVLLQNDPNPDVLS 203

Query: 248 RLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQH-LSYN-SPHYGR 305
           + G                     +     A  Y  +  ++ ++LL    S N +P  G 
Sbjct: 204 KTG---------------------FTPLHIAAHYENL--NVAQLLLNRGASVNFTPQNGI 240

Query: 306 TLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCD 365
           T LH A   G    V +LL  G  AQ   +T K E  P+H AAR G+  I + L+D G  
Sbjct: 241 TPLHIASRRGNVIMVRLLLDRG--AQIETKT-KDELTPLHCAARNGHVRISEILLDHGAP 297

Query: 366 LNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRA 425
           +  KT++G + + ++A+    +CV++L +  A+   +++   +   +A       G  R 
Sbjct: 298 IQAKTKNGLSPIHMAAQGDHLDCVRLLLQYDAEIDDITLDHLTPLHVAA----HCGHHRV 353

Query: 426 VLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAA 485
              ++  G  P S  +  F+PL    +   +  ++ L+ +   ++D   ++G + + VA+
Sbjct: 354 AKVLLDKGAKPNSRALNGFTPLHIACKKNHVRVMELLL-KTGASIDAVTESGLTPLHVAS 412

Query: 486 SKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGF 545
             GH+ + + L+  GA   + N   +T + ++    + ++  K +L+   +   +     
Sbjct: 413 FMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEV-AKYLLQNKAKVNAKAKDDQ 471

Query: 546 YALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDI 605
             LHCAAR G  + V+LL       N+    G+TPL +AAREGH      L+   A    
Sbjct: 472 TPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQAC 531

Query: 606 KNARGETALSLARK 619
              +G T L +A K
Sbjct: 532 MTKKGFTPLHVAAK 545

Isoform Mu17 together with obscurin in skeletal muscle may provide a molecular link between the sarcoplasmic reticulum and myofibrils.

Homo sapiens (taxid: 9606)

>sp|Q01484|ANK2_HUMAN Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4

 Score =  122 bits (307), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 143/577 (24%), Positives = 248/577 (42%), Gaps = 78/577 (13%)

Query: 81  VTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFAT-TIAVREGHLEILEILLKAGASQP 139
           +T L +A+  GN  +VK LL  G  ++ K   G      A R GH +++E+LL+ GA   
Sbjct: 267 ITPLHVASKRGNTNMVKLLLDRGGQIDAKTRDGLTPLHCAARSGHDQVVELLLERGA--- 323

Query: 140 ACEEALLEASCHGQARLAELLMGS--DLIRPHVAVH-SLVTACCRGFVDVVDTLMKCGVD 196
                LL  + +G + L     G   + ++ H+  H + V      ++  +     CG  
Sbjct: 324 ----PLLARTKNGLSPLHMAAQGDHVECVK-HLLQHKAPVDDVTLDYLTALHVAAHCG-H 377

Query: 197 INATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDT 256
              T  LL +   P+       + L  A    ++ V++LL++ GA+       G      
Sbjct: 378 YRVTKLLLDKRANPNARALNGFTPLHIACKKNRIKVMELLVKYGASIQAITESG------ 431

Query: 257 TTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHY----GRTLLHHAI 312
                            +T   V  F    +I+ +LLQ+ +  SP      G T LH A 
Sbjct: 432 -----------------LTPIHVAAFMGHLNIVLLLLQNGA--SPDVTNIRGETALHMAA 472

Query: 313 LCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTES 372
             G    V  LL  GA      R ++T   P+H+A+RLG + IVQ L+      +  T +
Sbjct: 473 RAGQVEVVRCLLRNGALVDARAREEQT---PLHIASRLGKTEIVQLLLQHMAHPDAATTN 529

Query: 373 GETALMISAKYKQEECVKVLAKAGADFGLVSVSG----------------------QSAS 410
           G T L ISA+  Q +   VL +AGA   L +  G                      ++A+
Sbjct: 530 GYTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTPLHVAAKYGSLDVAKLLLQRRAAA 589

Query: 411 SIAGSNWWS-------VGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALI 463
             AG N  +          Q+  L ++  G  P ++    ++PL   A+   +     L+
Sbjct: 590 DSAGKNGLTPLHVAAHYDNQKVALLLLEKGASPHATAKNGYTPLHIAAKKNQMQIASTLL 649

Query: 464 GR-EELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQN 522
               E N+  +   G + + +A+ +GH ++   L+  GA++ +  KSG T++ L+     
Sbjct: 650 NYGAETNIVTK--QGVTPLHLASQEGHTDMVTLLLDKGANIHMSTKSGLTSLHLAAQEDK 707

Query: 523 CDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLM 582
            ++ + ++ +   ++      G+  L  A   G++  V  L  +G  VN    +GYTPL 
Sbjct: 708 VNVAD-ILTKHGADQDAHTKLGYTPLIVACHYGNVKMVNFLLKQGANVNAKTKNGYTPLH 766

Query: 583 LAAREGHGPMCELLISNGAVCDIKNARGETALSLARK 619
            AA++GH  +  +L+ +GA  +   A G TAL++A++
Sbjct: 767 QAAQQGHTHIINVLLQHGAKPNATTANGNTALAIAKR 803

Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes. Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.

Homo sapiens (taxid: 9606)

>sp|Q8C8R3|ANK2_MOUSE Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2

 Score =  120 bits (301), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 141/577 (24%), Positives = 245/577 (42%), Gaps = 78/577 (13%)

Query: 81  VTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFAT-TIAVREGHLEILEILLKAGASQP 139
           +T L +A+  GN  +VK LL  G  ++ K   G      A R GH +++E+LL+  A   
Sbjct: 267 ITPLHVASKRGNTNMVKLLLDRGGQIDAKTRDGLTPLHCAARSGHDQVVELLLERKA--- 323

Query: 140 ACEEALLEASCHGQARLAELLMGS--DLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDI 197
                LL  + +G + L     G   + ++  +   + V      ++  +     CG   
Sbjct: 324 ----PLLARTKNGLSPLHMAAQGDHVECVKHLLQYKAPVDDVTLDYLTALHVAAHCG-HY 378

Query: 198 NATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTT 257
             T  LL +   P+       + L  A    ++ V++LL++ GA+       G       
Sbjct: 379 RVTKLLLDKRANPNARALNGFTPLHIACKKNRIKVMELLVKYGASIQAITESG------- 431

Query: 258 TGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPH----YGRTLLHHAIL 313
                           +T   V  F    +I+ +LLQ+ +  SP      G T LH A  
Sbjct: 432 ----------------LTPIHVAAFMGHLNIVLLLLQNGA--SPDVTNIRGETALHMAAR 473

Query: 314 CGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESG 373
            G    V  LL  GA      R ++T   P+H+A+RLG + IVQ L+      +  T +G
Sbjct: 474 AGQVEVVRCLLRNGALVDARAREEQT---PLHIASRLGKTEIVQLLLQHMAHPDAATTNG 530

Query: 374 ETALMISAKYKQEECVKVLAKAGADFGLVSVSG----------------------QSASS 411
            T L ISA+  Q +   VL +AGA   L +  G                      ++A+ 
Sbjct: 531 YTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTPLHVAAKYGSLDVAKLLLQRRAAAD 590

Query: 412 IAGSNWWS-------VGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALI- 463
            AG N  +          Q+  L ++  G  P ++    ++PL   A+   +     L+ 
Sbjct: 591 SAGKNGLTPLHVAAHYDNQKVALLLLEKGASPHATAKNGYTPLHIAAKKNQMQIASTLLN 650

Query: 464 -GREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQN 522
            G E   +  Q   G + + +A+ +GH ++   L+  GA++ +  KSG T++ L+     
Sbjct: 651 YGAETNTVTKQ---GVTPLHLASQEGHTDMVTLLLDKGANIHMSTKSGLTSLHLAAQEDK 707

Query: 523 CDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLM 582
            ++ + ++ +   ++      G+  L  A   G++  V  L  +G  VN    +GYTPL 
Sbjct: 708 VNVAD-ILTKHGADRDAYTKLGYTPLIVACHYGNVKMVNFLLKQGANVNAKTKNGYTPLH 766

Query: 583 LAAREGHGPMCELLISNGAVCDIKNARGETALSLARK 619
            AA++GH  +  +L+ +GA  +   A G TAL++A++
Sbjct: 767 QAAQQGHTHIINVLLQHGAKPNATTANGNTALAIAKR 803

Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes (By similarity). Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.

Mus musculus (taxid: 10090)

>sp|Q4UMH6|Y381_RICFE Putative ankyrin repeat protein RF_0381 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=RF_0381 PE=4 SV=1

 Score =  120 bits (301), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 155/551 (28%), Positives = 235/551 (42%), Gaps = 71/551 (12%)

Query: 81   VTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT-IAVREGHLEILEILLKAGASQP 139
            V +L  AA +GN+ L K L   GADVN K   G      AV+ G+L +++ L++  A+  
Sbjct: 639  VISLHCAAKNGNLDLAKLLAKNGADVNAKTDNGETVLHYAVKSGNLHLVKWLIENQANIH 698

Query: 140  AC----EEALLEASCHGQARLAELLM--GSDL-IRPHVAVHSLVTACCRGFVDVVDTLMK 192
            A     E  L  A     + L  LL+  G+D+  +    + +L  A   G +D+V  L+ 
Sbjct: 699  AKTDNGETVLHYAVSFNNSDLVYLLIAYGADVNAKTDNGLTALHYAVYDGNLDLVSLLIS 758

Query: 193  CGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAW 252
             G D+NA              TN   + L +AV      +V LL+  GA+ + K      
Sbjct: 759  HGADVNAK-------------TNSGETILYSAVDYGSPDLVYLLIAYGADVNAK------ 799

Query: 253  SWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSI-LRMLLQHLSYNSPHYGRTLLHHA 311
               T  GE             +   AVE    +G++ L  LL H   N  +  +T+LH A
Sbjct: 800  ---TDNGE------------TVLHYAVE----SGNLDLVSLLIHNGANVNN-AKTILHFA 839

Query: 312  ILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTE 371
               G    V  L+   AD      + +T    +H AA  G   +V  LI +  D++ KT 
Sbjct: 840  AKSGNLNLVNWLIKNKADIHAKTNSGET---ILHFAAESGNLNLVNWLIKNKADIHAKTN 896

Query: 372  SGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGS-------NWWSVGFQR 424
            SGET L  +AK      V  L K  AD    + SG++    A         NW       
Sbjct: 897  SGETILHFAAKSGNLNLVNWLIKNKADIHAKTNSGETILHFAAKSGNLNLVNWL------ 950

Query: 425  AVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVA 484
                I    +I   +N    + L F A++G++  +  LI     +++ + D+G +A+  A
Sbjct: 951  ----IKNKADIHAKTNSGE-TILHFAAESGNLNLVSLLI-HNGTDINTKTDDGLTALHYA 1004

Query: 485  ASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGG 544
               G++ +   L++ G DV     SG+T +  +    + DL   +M+  A +   +   G
Sbjct: 1005 VESGNLNLVSLLIHKGIDVNAKTNSGETILHFAVDLGSLDLVSLLMVRGA-DVNAKTDDG 1063

Query: 545  FYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCD 604
              ALH A    +L  V LL   G  VN  +  G TPL  A       +  LLI NGA  +
Sbjct: 1064 LTALHYAVESDNLALVSLLMVYGADVNAKNNSGETPLHYAVIFNSLDLVSLLIHNGADIN 1123

Query: 605  IKNARGETALS 615
             KN  GET L+
Sbjct: 1124 TKNNSGETVLN 1134

Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) (taxid: 315456)

>sp|Q9ULJ7|ANR50_HUMAN Ankyrin repeat domain-containing protein 50 OS=Homo sapiens GN=ANKRD50 PE=1 SV=4

 Score =  110 bits (275), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 142/536 (26%), Positives = 227/536 (42%), Gaps = 58/536 (10%)

Query: 95  LVKKLLSTGADVNQKLFRGFATTIAVREG--HLEILEILLKAGASQPACEEA----LLEA 148
           +++ L+  GA VN +  R   T+  VR+     + +  LL  GAS   C+      L  A
Sbjct: 496 VLQLLVKAGAHVNSEDDR---TSCIVRQALEREDSIRTLLDNGASVNQCDSNGRTLLANA 552

Query: 149 SCHGQARLAELLM--GSDLIRPHVAVHSLVTACCR-GFVDVVDTLMKCGVDINATDRLLL 205
           +  G   +  LL+  G+DL       H+ +T   R G   VV+ L+ CG +IN TD+   
Sbjct: 553 AYSGSLDVVNLLVSRGADLEIEDAHGHTPLTLAARQGHTKVVNCLIGCGANINHTDQ--- 609

Query: 206 QSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVG 265
                        +AL +A       VV  LL AG   D          D  +    R  
Sbjct: 610 ----------DGWTALRSAAWGGHTEVVSALLYAGVKVDCA--------DADSRTALRAA 651

Query: 266 AGLAEPYAITWCAVEYFEITGSILRMLLQHLS--YNSPHYGRTLLHHAILCGCTGAVAVL 323
           A         W   E       I+  LLQH +    + + GRT L  A   G    V  L
Sbjct: 652 A---------WGGHE------DIVLNLLQHGAEVNKADNEGRTALIAAAYMGHREIVEHL 696

Query: 324 LSCGADAQCPIRTQKTEFH--PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISA 381
           L  GA+        +T      + + A  G++++V  LID G +++   + G T L+++A
Sbjct: 697 LDHGAEVNHEDVDGRTALSVAALCVPASKGHASVVSLLIDRGAEVDHCDKDGMTPLLVAA 756

Query: 382 KYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNV 441
                + V +L + GAD      +G++    A S    +G    V  ++  G    S + 
Sbjct: 757 YEGHVDVVDLLLEGGADVDHTDNNGRTPLLAAAS----MGHASVVNTLLFWGAAVDSIDS 812

Query: 442 AVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGA 501
              + L   +  G++  ++ L+ R  L+ +++DD G++ + +AA +GH  +   L+  GA
Sbjct: 813 EGRTVLSIASAQGNVEVVRTLLDRG-LDENHRDDAGWTPLHMAAFEGHRLICEALIEQGA 871

Query: 502 DVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVR 561
               ++  G+   +L+    + D  + ++LE       R   G  AL  AA  G  D V 
Sbjct: 872 RTNEIDNDGRIPFILASQEGHYDCVQ-ILLENKSNIDQRGYDGRNALRVAALEGHRDIVE 930

Query: 562 LLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLA 617
           LL S G  VN  D DG   L + A E    M E  + NGA  +  +A G TAL ++
Sbjct: 931 LLFSHGADVNCKDADGRPTLYILALENQLTMAEYFLENGANVEASDAEGRTALHVS 986

Homo sapiens (taxid: 9606)

>sp|Q5F478|ANR44_CHICK Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B OS=Gallus gallus GN=ANKRD44 PE=2 SV=1

 Score =  109 bits (272), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 189/440 (42%), Gaps = 44/440 (10%)

Query: 182 GFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGA 241
           G  D+++ L+  G  +NA D + L  L               AV SR    VQ+L++  A
Sbjct: 52  GDADIIELLILSGARVNAKDNMWLTPLH-------------RAVASRSEEAVQVLIKHSA 98

Query: 242 NTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYN-S 300
           + + + +    +W T       V A           A++  EI   I+ ML    S N S
Sbjct: 99  DVNARDK----NWQTP----LHVAAANK--------ALKCAEI---IIPMLS---SVNVS 136

Query: 301 PHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLI 360
              GRT LHHA L G    V +LL+ GA+        K +   +H AA +G+  +V  LI
Sbjct: 137 DRGGRTALHHAALNGHVEMVNLLLAKGANINA---FDKKDRRALHWAAYMGHLEVVALLI 193

Query: 361 DSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSV 420
           + G ++  K + G T L  +A   Q   VK L   G +   +++ G +A  IA  N    
Sbjct: 194 NHGAEVTCKDKKGYTPLHAAASNGQINIVKHLLNLGVEIDEMNIYGNTALHIACYN---- 249

Query: 421 GFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSA 480
           G    V ++I  G      N   F+PL F A +   A    L+     +++ Q  +G S 
Sbjct: 250 GQDSVVNELIDYGANVNQPNNNGFTPLHFAAASTHGALCLELLVNNGADVNIQSKDGKSP 309

Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           + + A  G     + L+  G ++  ++K G T + ++    + +L    ++    +    
Sbjct: 310 LHMTAVHGRFTRSQTLIQNGGEIDCVDKDGNTPLHVAARYGH-ELLINTLITSGADTAKC 368

Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
                + LH AA     D  R L S G+ ++ PD  G T L  AA  G+    +LL S+G
Sbjct: 369 GIHNMFPLHLAALNAHSDCCRKLLSSGFEIDTPDSFGRTCLHAAAAGGNVECIKLLQSSG 428

Query: 601 AVCDIKNARGETALSLARKN 620
           A  + K+ RG T L  A  N
Sbjct: 429 ADFNKKDKRGRTPLHYAAAN 448

Putative regulatory subunit of protein phosphatase 6 (PP6) that may be involved in the recognition of phosphoprotein substrates.

Gallus gallus (taxid: 9031)

>sp|Q8Q0U0|Y045_METMA Putative ankyrin repeat protein MM_0045 OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=MM_0045 PE=4 SV=1

 Score =  106 bits (265), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 134/275 (48%), Gaps = 47/275 (17%)

Query: 347 AARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSG 406
           AA  GY  ++  LI+SG +L+ + E+G TAL+ +AK ++ + + +L K GAD      +G
Sbjct: 108 AADKGYRDVIGLLIESGPNLDLQDENGNTALISAAKIERGDIIDLLVKNGADLNFQDENG 167

Query: 407 QSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGRE 466
           ++A   A      VG++     +I +G                                 
Sbjct: 168 ETALKFA----VKVGYKNIADQLIDAGT-------------------------------- 191

Query: 467 ELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLF 526
             +L+ QD+NG +A++ AA + H ++   L+ AGAD+ + + SGKTA++ +       + 
Sbjct: 192 --DLNIQDENGETALICAADRAHRDIAELLIKAGADLNIQDNSGKTALVAA-----TKIG 244

Query: 527 EKVMLEFALEKGN----RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLM 582
            K ++E  +  G     ++  G  AL  AA RG  D V LL   G  +N+PD  G T LM
Sbjct: 245 HKGIVELLVNAGADLNLQDKNGNTALIYAADRGYRDIVNLLIEGGASLNIPDEAGLTALM 304

Query: 583 LAAREGHGPMCELLISNGAVCDIKNARGETALSLA 617
            +A+ G   + ELLI  GA  +I++   +TA  LA
Sbjct: 305 FSAQTGRKDIVELLIKAGADINIEDKNNKTAADLA 339

Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) (taxid: 192952)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	748
147840488	829	hypothetical protein VITISV_018267 [Viti	0.998	0.901	0.775	0.0
359488597	829	PREDICTED: ankyrin repeat domain-contain	0.998	0.901	0.774	0.0
255536965	748	ankyrin repeat-containing protein, putat	0.995	0.995	0.761	0.0
356560509	753	PREDICTED: ankyrin repeat domain-contain	0.994	0.988	0.729	0.0
449441380	753	PREDICTED: ankyrin-2-like [Cucumis sativ	0.994	0.988	0.707	0.0
356570113	754	PREDICTED: putative ankyrin repeat prote	0.995	0.988	0.717	0.0
357503833	745	Ankyrin repeat domain-containing protein	0.991	0.995	0.708	0.0
297738379	762	unnamed protein product [Vitis vinifera]	0.990	0.972	0.676	0.0
359473567	761	PREDICTED: ankyrin-2-like [Vitis vinifer	0.990	0.973	0.676	0.0
240256292	751	uncharacterized protein [Arabidopsis tha	0.991	0.988	0.673	0.0

>gi|147840488|emb|CAN68422.1| hypothetical protein VITISV_018267 [Vitis vinifera]

 Score = 1180 bits (3052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 587/757 (77%), Positives = 665/757 (87%), Gaps = 10/757 (1%)

Query: 1   MTVF--------SVRQVVPVDYEAEVSQRLLEATLAGDLKSATECIADPYVDVNFVGAVS 52
           MTVF        + +QV PVD EAEVSQRLLEA+ +GDLKSA ECIADP+VDVNFVG V 
Sbjct: 69  MTVFGHSGGGFLTGKQVFPVDCEAEVSQRLLEASHSGDLKSALECIADPFVDVNFVGVVC 128

Query: 53  LKTRKTEVVLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFR 112
           LK ++TEV+LR+    EVRVE+EEFK++VTALFLA H+GNV LV+KLLS GADVNQKLFR
Sbjct: 129 LKAKRTEVLLRDESAGEVRVEYEEFKTEVTALFLAVHTGNVALVRKLLSIGADVNQKLFR 188

Query: 113 GFATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAV 172
           GFATT AVREGHLEILEILLKAGASQPACEEALLEASCHG+ARLAELLM SDLIRPH+AV
Sbjct: 189 GFATTAAVREGHLEILEILLKAGASQPACEEALLEASCHGRARLAELLMASDLIRPHIAV 248

Query: 173 HSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSV 232
           H+LVTACCRGFVDVVDTLMKCGVD NATDR+LLQS KPSLHTN+DC+ALVAAVVSRQVSV
Sbjct: 249 HALVTACCRGFVDVVDTLMKCGVDANATDRVLLQSSKPSLHTNLDCTALVAAVVSRQVSV 308

Query: 233 VQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRML 292
           V+LLLQAGA TD+KVRLGAWSWD  +GEEFRVGAGLAEPY ITWCAVEYFE++G+ILRML
Sbjct: 309 VRLLLQAGARTDIKVRLGAWSWDMASGEEFRVGAGLAEPYTITWCAVEYFEVSGAILRML 368

Query: 293 LQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQ-KTEFHPIHLAARLG 351
           LQHLS N+ H+GRTLLHHAILCG TGA+ VLL+CGA  + P++T  KTEF PIH+AARLG
Sbjct: 369 LQHLSPNTLHFGRTLLHHAILCGNTGAINVLLNCGAHVESPVKTTGKTEFRPIHMAARLG 428

Query: 352 YSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASS 411
            +T++QSLID GCDLN+KT+SGETALMI AKYKQE+C++VLA AGADFGLV+++GQSASS
Sbjct: 429 LATVLQSLIDFGCDLNSKTDSGETALMICAKYKQEDCLRVLAMAGADFGLVNITGQSASS 488

Query: 412 IAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLD 471
           IA SN W++GFQ+AVLD IR+  +P+SS+  VFSPLMFVA+ GDI ALK LIG+ E+ LD
Sbjct: 489 IAVSNRWTLGFQQAVLDAIRARKVPRSSSFQVFSPLMFVARVGDIYALKTLIGQPEIELD 548

Query: 472 YQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVML 531
           YQDDNG SAVMV A +GHVE FR LV+AGADVKL NK G+TAI LSELNQN DLFEKVML
Sbjct: 549 YQDDNGLSAVMVTAIEGHVEAFRLLVFAGADVKLSNKYGETAITLSELNQNHDLFEKVML 608

Query: 532 EFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGP 591
           EF LEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGY VNVPDGDGYTPLMLAAREGHG 
Sbjct: 609 EFTLEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYDVNVPDGDGYTPLMLAAREGHGS 668

Query: 592 MCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTK 651
           MCELLIS GA  ++KNARGETALSLARKN  MKNDAE VILD++AR LVLGG  VLKHTK
Sbjct: 669 MCELLISCGANTEVKNARGETALSLARKN-GMKNDAECVILDQLARKLVLGGDWVLKHTK 727

Query: 652 GGKGTPHRKDIRMLGSEGVLRWGNSRRRNVICREAKLGPSPAFQKNRRGKGDVNEPGVFH 711
           GGKGTPH K+++M+G+ GVLRWG S RRNVICREA++GPS AFQKNR+ +G  +EPG+F 
Sbjct: 728 GGKGTPHGKEMKMMGALGVLRWGKSSRRNVICREAEMGPSSAFQKNRQRQGGADEPGLFR 787

Query: 712 IVTTKNNEVHFVCQGGLEMAELWVRGIMLVTKAAMHG 748
           +VTTKN EVHFVC+GGLE AELWVRGI L+T+ A+ G
Sbjct: 788 VVTTKNKEVHFVCEGGLEKAELWVRGIKLITREAIFG 824

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359488597|ref|XP_002270424.2| PREDICTED: ankyrin repeat domain-containing protein 17-like [Vitis vinifera] gi|296090241|emb|CBI40060.3| unnamed protein product [Vitis vinifera]

 Score = 1177 bits (3045), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 586/757 (77%), Positives = 664/757 (87%), Gaps = 10/757 (1%)

Query: 1   MTVF--------SVRQVVPVDYEAEVSQRLLEATLAGDLKSATECIADPYVDVNFVGAVS 52
           MTVF        + +QV PVD EAEVSQRLLEA+ +GDLKSA ECIADP+VDVNFVG V 
Sbjct: 69  MTVFGHSGGGFLTGKQVFPVDCEAEVSQRLLEASHSGDLKSALECIADPFVDVNFVGVVC 128

Query: 53  LKTRKTEVVLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFR 112
           LK ++TEV+LR+    EVRVE+EEFK++VTALFLA H+GNV LV+KLLS GADVNQKLFR
Sbjct: 129 LKAKRTEVLLRDESAGEVRVEYEEFKTEVTALFLAVHTGNVALVRKLLSIGADVNQKLFR 188

Query: 113 GFATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAV 172
           GFATT AVREGHLEILEILLKAGASQPACEEALLEASCHG+ARLAELLM SDLIRPH+AV
Sbjct: 189 GFATTAAVREGHLEILEILLKAGASQPACEEALLEASCHGRARLAELLMASDLIRPHIAV 248

Query: 173 HSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSV 232
           H+LVTACCRGFVDVVDTLMKCGVD NATDR+LLQS KPSLHTN+DC+ALVAAVVSRQVSV
Sbjct: 249 HALVTACCRGFVDVVDTLMKCGVDANATDRVLLQSSKPSLHTNLDCTALVAAVVSRQVSV 308

Query: 233 VQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRML 292
           V+LLLQAGA TD+KVRLGAWSWD  +GEEFRVGAGLAEPY ITWCAVEYFE++G+ILRML
Sbjct: 309 VRLLLQAGARTDIKVRLGAWSWDMASGEEFRVGAGLAEPYTITWCAVEYFEVSGAILRML 368

Query: 293 LQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQ-KTEFHPIHLAARLG 351
           LQHLS N+ H+GRTLLHHAILCG TGA+ VLL+CGA  + P++T  KTEF PIH+AARLG
Sbjct: 369 LQHLSPNTLHFGRTLLHHAILCGNTGAINVLLNCGAHVESPVKTTGKTEFRPIHMAARLG 428

Query: 352 YSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASS 411
            +T++QSLID GCDLN+KT+SGETALMI AKYKQE+C++VLA AGADFGLV+++GQSASS
Sbjct: 429 LATVLQSLIDFGCDLNSKTDSGETALMICAKYKQEDCLRVLAMAGADFGLVNITGQSASS 488

Query: 412 IAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLD 471
           IA SN W++GFQ+AVLD IR+  +P+SS+  VFSPLMFVA+ GDI ALK LIG+ E+ LD
Sbjct: 489 IAVSNRWTLGFQQAVLDAIRARKVPRSSSFQVFSPLMFVARVGDIYALKTLIGQPEIELD 548

Query: 472 YQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVML 531
           YQDDNG SAVMV A +GHVE FR LV+AGADVKL NK G+TAI LSELNQN DLFEKVML
Sbjct: 549 YQDDNGLSAVMVTAIEGHVEAFRLLVFAGADVKLSNKYGETAITLSELNQNHDLFEKVML 608

Query: 532 EFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGP 591
           EF LEKGN NAGGFYALHCAARRGDLDAVRLLTSRGY VNVPDGDGYTPLMLAAREGHG 
Sbjct: 609 EFTLEKGNHNAGGFYALHCAARRGDLDAVRLLTSRGYDVNVPDGDGYTPLMLAAREGHGS 668

Query: 592 MCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTK 651
           MCELLIS GA  ++KNARGETALSLARKN  MKNDAE VILD++AR LVLGG  VLKHTK
Sbjct: 669 MCELLISCGANTEVKNARGETALSLARKN-GMKNDAECVILDQLARKLVLGGDWVLKHTK 727

Query: 652 GGKGTPHRKDIRMLGSEGVLRWGNSRRRNVICREAKLGPSPAFQKNRRGKGDVNEPGVFH 711
           GGKGTPH K+++M+G+ GVLRWG S RRNVICREA++GPS AFQKNR+ +G  +EPG+F 
Sbjct: 728 GGKGTPHGKEMKMMGALGVLRWGKSSRRNVICREAEMGPSSAFQKNRQRQGGADEPGLFR 787

Query: 712 IVTTKNNEVHFVCQGGLEMAELWVRGIMLVTKAAMHG 748
           +VTTKN EVHFVC+GGLE AELWVRGI L+T+ A+ G
Sbjct: 788 VVTTKNKEVHFVCEGGLEKAELWVRGIKLITREAIFG 824

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255536965|ref|XP_002509549.1| ankyrin repeat-containing protein, putative [Ricinus communis] gi|223549448|gb|EEF50936.1| ankyrin repeat-containing protein, putative [Ricinus communis]

 Score = 1154 bits (2984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 569/747 (76%), Positives = 645/747 (86%), Gaps = 2/747 (0%)

Query: 1   MTVFSVRQVVPVDYEAEVSQRLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEV 60
           MTVF  +QVVPVDYEAEVSQRLLEA+LAGDL+SA ECIAD +VDVNFVGAV LK RK+EV
Sbjct: 1   MTVFYGKQVVPVDYEAEVSQRLLEASLAGDLRSALECIADEFVDVNFVGAVWLKCRKSEV 60

Query: 61  VLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAV 120
           VLR+  PSEV  ++EEFK+DVTALFLA HSGNV L+KKLLS GADVNQKLFRGFATT AV
Sbjct: 61  VLRDESPSEVVFDYEEFKTDVTALFLAVHSGNVALIKKLLSVGADVNQKLFRGFATTAAV 120

Query: 121 REGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACC 180
           REG LEILEILLKAGASQPACEEALLEASCHGQARL ELLM SDLIRPHVAVH+LVTACC
Sbjct: 121 REGRLEILEILLKAGASQPACEEALLEASCHGQARLVELLMSSDLIRPHVAVHALVTACC 180

Query: 181 RGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAG 240
           RGFVDVVDTL KCGVD+N TDRLLL S KPSLHTNVDC ALVAAVVSRQV+VV  LL+ G
Sbjct: 181 RGFVDVVDTLAKCGVDVNTTDRLLLLSSKPSLHTNVDCPALVAAVVSRQVAVVHTLLKVG 240

Query: 241 ANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNS 300
           A  ++KVRLGAWSWDT TGEEFRVGAGLAEPYAITW AVEYFEITG+IL MLLQH S N+
Sbjct: 241 ARMNVKVRLGAWSWDTNTGEEFRVGAGLAEPYAITWLAVEYFEITGAILCMLLQHFSPNT 300

Query: 301 PHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLI 360
            H+GRTLLHHAILCG  GA+ VLLSCGA+ + P++TQKTEF PIH+AARLG +T++Q L 
Sbjct: 301 AHHGRTLLHHAILCGNAGAIKVLLSCGANVESPVKTQKTEFRPIHMAARLGLATVLQCLT 360

Query: 361 DSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSV 420
           DSGCDLN++T++G+TALMISAKY+QEEC++VLA AGADFGLV+V+GQ+  S+A +N WS 
Sbjct: 361 DSGCDLNSRTDTGDTALMISAKYRQEECLQVLAMAGADFGLVNVAGQTVHSLA-TNMWSH 419

Query: 421 GFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSA 480
            FQ+AVLD+I SG +PKSSN AVF PL+FVAQ GD  ALK LI   E+NLDYQDDNGFSA
Sbjct: 420 SFQQAVLDVINSGKVPKSSNFAVFCPLIFVAQTGDTEALKVLIDLGEINLDYQDDNGFSA 479

Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           VM AA KGHVE FR LVYAGADVKL NK+G+TAI LS+LNQ+ DLFEKVMLEFA++KGNR
Sbjct: 480 VMFAAIKGHVEAFRLLVYAGADVKLFNKAGETAITLSKLNQHHDLFEKVMLEFAIQKGNR 539

Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           NAGGFYALHCAAR GD+DAV+LL+SRGY VN+PD DGYTPLMLAA+EGHG  C+LLIS G
Sbjct: 540 NAGGFYALHCAARHGDMDAVKLLSSRGYDVNLPDADGYTPLMLAAKEGHGSTCKLLISCG 599

Query: 601 AVCDIKNARGETALSLARKN-SSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHR 659
           A C+ KN  GETALSLARK     KNDAE VILDE+AR LVLGG +V KHTK GKG PHR
Sbjct: 600 ANCEFKNPSGETALSLARKKYGGRKNDAEHVILDELARKLVLGGSYVQKHTKRGKGAPHR 659

Query: 660 KDIRMLGSEGVLRWGNSRRRNVICREAKLGPSPAFQKNRRGKGDVNEPGVFHIVTTKNNE 719
           K+I M+G  GVLRWG SRRRNVICREA++G SP+F++NRR +GD + PG+F ++TTKN E
Sbjct: 660 KEIVMVGDRGVLRWGKSRRRNVICREAEVGASPSFERNRRNRGDADIPGIFRVLTTKNKE 719

Query: 720 VHFVCQGGLEMAELWVRGIMLVTKAAM 746
           +HFVC GG EMAELWVRGI LVT+ A+
Sbjct: 720 LHFVCNGGSEMAELWVRGIKLVTREAI 746

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560509|ref|XP_003548534.1| PREDICTED: ankyrin repeat domain-containing protein 50-like [Glycine max]

 Score = 1102 bits (2850), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 544/746 (72%), Positives = 615/746 (82%), Gaps = 2/746 (0%)

Query: 1   MTVFSVRQVVPVDYEAEVSQRLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEV 60
           MTVFS +QV PV+YEAEVSQRLLEA+ +GDL  A  CIADP VDVNF GAV+LKT  T++
Sbjct: 1   MTVFSAKQVFPVNYEAEVSQRLLEASHSGDLPLAFRCIADPSVDVNFAGAVTLKTASTDL 60

Query: 61  VLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAV 120
           +L    PS++R++F+EF SDV+ LFLA H+ +  LVKKLLS GADVNQKLFRGFATT AV
Sbjct: 61  LLLPESPSQLRLDFQEFVSDVSPLFLAVHADHAALVKKLLSVGADVNQKLFRGFATTAAV 120

Query: 121 REGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACC 180
           REGH  ILEILLKAGASQPACEEAL+EASCHGQAR  ELLM SDLIRPHVAVH+LVTA C
Sbjct: 121 REGHFNILEILLKAGASQPACEEALIEASCHGQARCVELLMNSDLIRPHVAVHALVTASC 180

Query: 181 RGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAG 240
           RG VDVV+TL+KCGVD +ATDR+LLQSLKPSLHTNVDC+ALVA+V+ RQV VV LLLQ G
Sbjct: 181 RGLVDVVETLIKCGVDASATDRVLLQSLKPSLHTNVDCTALVASVIHRQVPVVDLLLQNG 240

Query: 241 ANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNS 300
              D +VRLGAWSWDT+TGEE RVGAGL E Y ITWCAVEYFE  G+ILR+LLQH+S + 
Sbjct: 241 VRLDFRVRLGAWSWDTSTGEELRVGAGLGESYGITWCAVEYFEKNGAILRLLLQHVS-SK 299

Query: 301 PHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRT-QKTEFHPIHLAARLGYSTIVQSL 359
           PH GRTLLHHAILCG   AV VLL CGAD + P++T  KT F PIH+A+R G  TI+Q L
Sbjct: 300 PHRGRTLLHHAILCGNVEAVKVLLECGADVEAPVKTTSKTHFLPIHMASRKGLPTIIQGL 359

Query: 360 IDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWS 419
           ID GCDLN+ T+SGETALMI AKYKQEEC+KVL  AGADFGLV+ +GQSASSIA SN WS
Sbjct: 360 IDFGCDLNSTTDSGETALMICAKYKQEECLKVLTMAGADFGLVNTAGQSASSIAESNKWS 419

Query: 420 VGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFS 479
           +GFQ+AVLD I+ G IP+SSN   FSP +FVAQ GD  ALK +I   E NLDYQDD+GFS
Sbjct: 420 LGFQQAVLDTIKRGKIPESSNTTSFSPFIFVAQVGDTEALKIVIESGEFNLDYQDDSGFS 479

Query: 480 AVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGN 539
           AVM AASKGHV+ FR LVYAGADVKL NKSG+TAI LSE+NQNCDLFEKVMLEF LEKGN
Sbjct: 480 AVMHAASKGHVDCFRLLVYAGADVKLCNKSGETAITLSEMNQNCDLFEKVMLEFELEKGN 539

Query: 540 RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISN 599
            NAGGFYALH AARRGDLDAV LLTS+GY VN PDG+ YTPLMLAAREGH  +CELLIS 
Sbjct: 540 INAGGFYALHRAARRGDLDAVTLLTSKGYDVNAPDGEDYTPLMLAAREGHASICELLISY 599

Query: 600 GAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHR 659
           GA C+ KNARGETAL LARK +  KN AE VILDE+AR LVLGG +VLKHTKGGKG+PH 
Sbjct: 600 GANCNAKNARGETALLLARKFTGGKNYAEAVILDELARKLVLGGAYVLKHTKGGKGSPHG 659

Query: 660 KDIRMLGSEGVLRWGNSRRRNVICREAKLGPSPAFQKNRRGKGDVNEPGVFHIVTTKNNE 719
           K ++MLGS GVL WG S RRNV+C EA+LGPS    +NR  KGD +EPG+F ++T K+ E
Sbjct: 660 KQMQMLGSAGVLCWGKSSRRNVVCCEAELGPSSTLHRNRYKKGDADEPGMFRVLTGKSRE 719

Query: 720 VHFVCQGGLEMAELWVRGIMLVTKAA 745
           VHFVC GGLE+AELWVRGI LVTK A
Sbjct: 720 VHFVCDGGLEVAELWVRGIKLVTKEA 745

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449441380|ref|XP_004138460.1| PREDICTED: ankyrin-2-like [Cucumis sativus] gi|449495266|ref|XP_004159782.1| PREDICTED: ankyrin-2-like [Cucumis sativus]

 Score = 1092 bits (2823), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 529/748 (70%), Positives = 628/748 (83%), Gaps = 4/748 (0%)

Query: 1   MTVFSVRQVVPVDYEAEVSQRLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEV 60
           MTVFS +QV P+++EAEVSQRL+EA+ +GDLKSA + IA+P VDVNF+GAV LK RKTEV
Sbjct: 1   MTVFSGKQVFPLNFEAEVSQRLIEASHSGDLKSALDYIANPCVDVNFIGAVHLKNRKTEV 60

Query: 61  VLREGKP-SEVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIA 119
           V  + +  S+VRVE++EFK+DVTALF+A H+GNV LVKKLLS GADVNQKLFRGFATT A
Sbjct: 61  VFTDDESASQVRVEYDEFKTDVTALFVAVHTGNVALVKKLLSVGADVNQKLFRGFATTAA 120

Query: 120 VREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTAC 179
           VRE H+EILEILLKAGASQPACEEALLE+SCHG AR AELLMGSDLIRPHVAVH+LVTAC
Sbjct: 121 VRESHIEILEILLKAGASQPACEEALLESSCHGHARSAELLMGSDLIRPHVAVHALVTAC 180

Query: 180 CRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQA 239
           CRGF+DVVDTL+KCGVD NATDR+LLQS KPSLHTNV+C+ALVAAVVSR++S+V+ LLQA
Sbjct: 181 CRGFIDVVDTLLKCGVDANATDRVLLQSSKPSLHTNVNCTALVAAVVSRKISIVRFLLQA 240

Query: 240 GANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYN 299
           GA TD+ VRLGAWSWD  TGEEFRVGAGLA+PY++TWCAVEYFE +G+IL MLL+H+S N
Sbjct: 241 GAQTDISVRLGAWSWDMDTGEEFRVGAGLADPYSVTWCAVEYFERSGAILHMLLRHMSPN 300

Query: 300 SPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQ-KTEFHPIHLAARLGYSTIVQS 358
           + HYGRTL+HHAILCG  GAVAVL  CGAD +CP++T  KTEF P+H+AARLG + ++Q 
Sbjct: 301 ALHYGRTLIHHAILCGNAGAVAVLSKCGADVECPVKTTGKTEFRPLHMAARLGNAAVLQC 360

Query: 359 LIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWW 418
           L+D+GCDLN++T++ +TALMI AK+K EEC+KVL  AGADFGLV+V+GQS SSIAGSN W
Sbjct: 361 LVDAGCDLNSRTDAEDTALMICAKHKYEECLKVLGAAGADFGLVNVAGQSVSSIAGSNQW 420

Query: 419 SVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGF 478
             GFQ+ V+D+I++G  P SSN+++F PL+  AQ GD  ALKALIG    +LDYQDD GF
Sbjct: 421 IFGFQQTVIDLIKTGKRPISSNMSIFCPLILAAQTGDTEALKALIGWGGCDLDYQDDQGF 480

Query: 479 SAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG 538
           +AVM AAS GH E FR LVYAGADV+L NKSG+TAI L +L+ N D FEKVMLEFAL+ G
Sbjct: 481 TAVMFAASNGHTEAFRLLVYAGADVRLSNKSGETAITLYQLHPNHDQFEKVMLEFALDMG 540

Query: 539 NRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLIS 598
           NRNA GFYALHCAARRGDLDAV+ LT++GY VN  D DGYTPLMLAAR GHG MC+LLIS
Sbjct: 541 NRNAAGFYALHCAARRGDLDAVKFLTNKGYDVNATDSDGYTPLMLAARGGHGSMCKLLIS 600

Query: 599 NGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPH 658
            GA  D ++ RGETALSLARKN   K++AE VILDE+AR LVL G  V KHT+GGKG+PH
Sbjct: 601 LGARADTRSTRGETALSLARKNE--KSEAEEVILDELARGLVLHGARVKKHTRGGKGSPH 658

Query: 659 RKDIRMLGSEGVLRWGNSRRRNVICREAKLGPSPAFQKNRRGKGDVNEPGVFHIVTTKNN 718
            K++RM+GS G+LRWG S RRNV+CRE ++G S  F KNR  KGD  E G+F ++T KN 
Sbjct: 659 GKELRMIGSMGMLRWGKSSRRNVVCREVEVGSSARFVKNRVKKGDGGEAGLFRVMTVKNK 718

Query: 719 EVHFVCQGGLEMAELWVRGIMLVTKAAM 746
           EVHFVC+GG EMAELWVRGI LVT+ A+
Sbjct: 719 EVHFVCEGGCEMAELWVRGIRLVTREAL 746

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356570113|ref|XP_003553235.1| PREDICTED: putative ankyrin repeat protein RF_0381-like [Glycine max]

 Score = 1076 bits (2783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 537/748 (71%), Positives = 617/748 (82%), Gaps = 3/748 (0%)

Query: 1   MTVFSVRQVVPVDYE-AEVSQRLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTE 59
           MTVFS +QV PVDYE  EVSQRLLEA+ +GDL  A  CI DP VDVNF GAV+LK   T+
Sbjct: 1   MTVFSAKQVFPVDYEETEVSQRLLEASHSGDLSLAFRCIVDPSVDVNFAGAVTLKIASTD 60

Query: 60  VVLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIA 119
           ++L    PS+VR++F+EF SDV+ LFLA H+ +  LV+KLLS GADVNQ+LFRGFATT A
Sbjct: 61  LLLLPESPSQVRLDFQEFISDVSPLFLAVHAAHAALVRKLLSVGADVNQRLFRGFATTAA 120

Query: 120 VREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTAC 179
           VREGH  ILEILLKAGASQPACEEAL+EASCHGQA   ELLM SD IRPHVAVH+LVTA 
Sbjct: 121 VREGHFNILEILLKAGASQPACEEALIEASCHGQAGCLELLMSSDFIRPHVAVHALVTAS 180

Query: 180 CRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQA 239
           CRGFVDVV+TL+KCGVD +ATDR+LLQSLKPSLH NVDC+ALVAAV+ RQV VV LLLQ 
Sbjct: 181 CRGFVDVVETLIKCGVDSSATDRVLLQSLKPSLHINVDCTALVAAVIHRQVPVVDLLLQN 240

Query: 240 GANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYN 299
           G   D +VRLGAWSWDT+TGEE RVGAGL EPY ITWCAVEYFE +G+ILR+LLQH S +
Sbjct: 241 GVRLDFEVRLGAWSWDTSTGEELRVGAGLGEPYGITWCAVEYFEKSGAILRLLLQHAS-S 299

Query: 300 SPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRT-QKTEFHPIHLAARLGYSTIVQS 358
            PH GRTLLHHAILCG   AV VLL CGAD + P++T  KT F PIH+A+R+G  TI+Q 
Sbjct: 300 KPHSGRTLLHHAILCGNVEAVKVLLECGADVESPVKTTSKTRFLPIHMASRIGLPTIIQC 359

Query: 359 LIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWW 418
           LID GCDLN+ T+SG++ALMI AKYKQEEC+KVL +AGADFGLV+++GQSASSIA S+ W
Sbjct: 360 LIDFGCDLNSTTDSGDSALMICAKYKQEECLKVLTRAGADFGLVNIAGQSASSIAKSDNW 419

Query: 419 SVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGF 478
           S+GFQ+AVLD IR G IPKSSN   FSPL+FVAQAGD  ALK +I     ++DYQDD+GF
Sbjct: 420 SLGFQQAVLDTIRRGKIPKSSNATTFSPLIFVAQAGDTEALKIVIESGAFDVDYQDDSGF 479

Query: 479 SAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG 538
           SAVM AASKGHV+ FR LVYAGADVKL NKSG+TAI LSE+N NCDLFEKVMLEF LEKG
Sbjct: 480 SAVMHAASKGHVDSFRLLVYAGADVKLCNKSGETAITLSEMNLNCDLFEKVMLEFELEKG 539

Query: 539 NRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLIS 598
           N NAGGFYALH AARRGDLDAV LLTS+GY VN PDG+ YTPLMLAAREGH  +CELLIS
Sbjct: 540 NINAGGFYALHRAARRGDLDAVTLLTSKGYDVNAPDGEDYTPLMLAAREGHASICELLIS 599

Query: 599 NGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPH 658
            GA C+ KNARGETAL LARK +  K+DAE VIL+E+AR LVLGG +VLKHTKGGKG+PH
Sbjct: 600 YGAHCNAKNARGETALLLARKVTGGKSDAEAVILNELARKLVLGGAYVLKHTKGGKGSPH 659

Query: 659 RKDIRMLGSEGVLRWGNSRRRNVICREAKLGPSPAFQKNRRGKGDVNEPGVFHIVTTKNN 718
            K ++MLGS GVL WG S RRNV+C EA+LGPS   ++NR  KGD  EPG+F ++T+K+ 
Sbjct: 660 GKQMQMLGSAGVLCWGKSSRRNVVCCEAELGPSSTLRRNRYKKGDAEEPGMFRVLTSKSR 719

Query: 719 EVHFVCQGGLEMAELWVRGIMLVTKAAM 746
           EVHFVC GGLE+AELWVRGI LVTK A+
Sbjct: 720 EVHFVCDGGLEVAELWVRGIKLVTKEAI 747

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357503833|ref|XP_003622205.1| Ankyrin repeat domain-containing protein [Medicago truncatula] gi|355497220|gb|AES78423.1| Ankyrin repeat domain-containing protein [Medicago truncatula]

 Score = 1068 bits (2763), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 527/744 (70%), Positives = 607/744 (81%), Gaps = 2/744 (0%)

Query: 1   MTVFSVRQVVPVDYEAEVSQRLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEV 60
           MTVFS +Q+ P++YE EVSQRLLEA+ +GDL  A  CI+DP VDVNF GAVSLK+R TE+
Sbjct: 1   MTVFSTKQIFPLNYETEVSQRLLEASHSGDLSLAFHCISDPSVDVNFTGAVSLKSRNTEL 60

Query: 61  VLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAV 120
           V+     S V VEF+EF +DVT LFLA H+GN +LV+KLLS GADVNQKLFRGFATT AV
Sbjct: 61  VVNCESSSRVCVEFQEFVTDVTPLFLAVHAGNASLVRKLLSVGADVNQKLFRGFATTAAV 120

Query: 121 REGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACC 180
           REGHL+ILE L+ AGASQ ACEEALLEAS HGQA   ELLM SD IRPH+AVH+LV ACC
Sbjct: 121 REGHLDILETLINAGASQLACEEALLEASYHGQAGCGELLMSSDFIRPHIAVHALVAACC 180

Query: 181 RGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAG 240
           RGFVDVV+TL+KCGVD +ATDR+LLQSLKPSLHTNVDC+ALVAAVV RQV VV LLLQ  
Sbjct: 181 RGFVDVVETLIKCGVDASATDRVLLQSLKPSLHTNVDCNALVAAVVHRQVHVVSLLLQNV 240

Query: 241 ANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNS 300
           A TD +VRLGAWSWD  TGEE RVGAGL EPY ITWCAVEYFE +G+ILR+LLQH+S N+
Sbjct: 241 ATTDFEVRLGAWSWDNATGEELRVGAGLGEPYGITWCAVEYFEKSGAILRLLLQHVS-NN 299

Query: 301 PHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRT-QKTEFHPIHLAARLGYSTIVQSL 359
            H GRT+LHHAILCG   AV +LL CGA+ +  ++T  KTEF P+H+A+RLG   I Q L
Sbjct: 300 CHCGRTILHHAILCGNVEAVRILLECGANVESLVKTTSKTEFLPVHMASRLGLPAITQCL 359

Query: 360 IDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWS 419
           ID GCDLN++T+ G+TALMI AKYKQEEC+KVL +AGADF LV+ +GQSASSIA S  WS
Sbjct: 360 IDFGCDLNSRTDCGDTALMICAKYKQEECLKVLTRAGADFCLVNSAGQSASSIAESYKWS 419

Query: 420 VGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFS 479
            GFQ+AV+D+IR+G IPKSSN + FSPL+FV++AGD  ALK +I   E +LDYQDD+GFS
Sbjct: 420 HGFQQAVVDVIRNGKIPKSSNTSTFSPLIFVSKAGDAEALKTVIESGEFDLDYQDDSGFS 479

Query: 480 AVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGN 539
           A M  A KGHVE FR LVYAGADVKL NKSG+TAI LSELNQNC+LFEKVMLEF LEKGN
Sbjct: 480 AAMHTAVKGHVESFRLLVYAGADVKLCNKSGETAITLSELNQNCNLFEKVMLEFTLEKGN 539

Query: 540 RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISN 599
           +N GGFYALHCAARRGDLDAV LLTS+G+ VNVPDG+ YTPLMLAAREGH  +C+LLIS 
Sbjct: 540 QNTGGFYALHCAARRGDLDAVTLLTSKGFDVNVPDGEDYTPLMLAAREGHASLCKLLISY 599

Query: 600 GAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHR 659
           GA C+ KNARGETAL LARK +  KNDAE VILDE+AR LVLGG +V KHTK GKG PH 
Sbjct: 600 GAHCNAKNARGETALLLARKFAGGKNDAEGVILDELARKLVLGGAYVQKHTKCGKGNPHV 659

Query: 660 KDIRMLGSEGVLRWGNSRRRNVICREAKLGPSPAFQKNRRGKGDVNEPGVFHIVTTKNNE 719
           K +RML S GVL WG S RRNV+CREA LGPS   ++NR   GD  EPG+F ++T KN E
Sbjct: 660 KQLRMLRSSGVLCWGQSSRRNVLCREALLGPSSTLRRNRHNTGDAEEPGMFRVLTNKNRE 719

Query: 720 VHFVCQGGLEMAELWVRGIMLVTK 743
           VHFVC+GG E A+LWVRGI LVT+
Sbjct: 720 VHFVCEGGSEAAKLWVRGIKLVTR 743

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297738379|emb|CBI27580.3| unnamed protein product [Vitis vinifera]

 Score = 1036 bits (2678), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 503/743 (67%), Positives = 605/743 (81%), Gaps = 2/743 (0%)

Query: 7   RQVVPVDYEAEVSQRLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEVVLREGK 66
           +QV P+DY AEVSQ+L++A+   DLKSA +CIADP+VDV+F+G V L+ RKTEVVL +  
Sbjct: 15  KQVFPIDYAAEVSQKLVDASHRNDLKSALDCIADPFVDVSFIGTVYLRARKTEVVLHDES 74

Query: 67  PSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLE 126
           P EVRVEFEEFK++VTALFLAAH+GNV LV+KLLS GA+VNQKLFRG+ATT AVREGHLE
Sbjct: 75  PHEVRVEFEEFKTEVTALFLAAHAGNVALVRKLLSVGANVNQKLFRGYATTAAVREGHLE 134

Query: 127 ILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDV 186
           IL+ L+ AGASQPACEEALLEAS  G+AR AELLMGS++IRP+ AVH+LVTACCRGFVDV
Sbjct: 135 ILQTLINAGASQPACEEALLEASYLGRARPAELLMGSEMIRPYAAVHALVTACCRGFVDV 194

Query: 187 VDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMK 246
           VDTL+KCGVD NATDR+LLQS KP +HTNV+C+AL  A+VSRQVSVV+LLLQAG   D+K
Sbjct: 195 VDTLIKCGVDANATDRMLLQSSKPFMHTNVNCNALAVAIVSRQVSVVRLLLQAGVRVDIK 254

Query: 247 VRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRT 306
           VRLGAWSWDT TGEEFRVG GLAEPY+ITWCAVEYFE +G+ILRMLLQH S N+ H GRT
Sbjct: 255 VRLGAWSWDTATGEEFRVGVGLAEPYSITWCAVEYFEASGAILRMLLQHHSVNNHHLGRT 314

Query: 307 LLHHAILCGCTGAVAVLLSCGADAQCPIR-TQKTEFHPIHLAARLGYSTIVQSLIDSGCD 365
           L+HHAILCG  GA+ VLL+CGAD + P++ T KTE  PIHLAA+ G + I+Q LI++GC+
Sbjct: 315 LVHHAILCGNPGALDVLLNCGADVELPVKTTSKTELRPIHLAAQFGLAKILQCLINAGCN 374

Query: 366 LNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRA 425
           LN+ T SGE+ALMI  +YK +EC++VLA AGADFGLV+ +GQ A SIA S  W++GF++A
Sbjct: 375 LNSPTASGESALMICTRYKHDECLRVLAAAGADFGLVNAAGQCACSIASSIRWTLGFRQA 434

Query: 426 VLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAA 485
           VLD+I +G+   SSN ++FSPL+F  QA D  ALK LI R ++++D QD NG SA M+AA
Sbjct: 435 VLDVIHAGSTVASSNTSIFSPLIFATQANDAVALKKLIERPDIDIDEQDQNGLSAAMIAA 494

Query: 486 SKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGF 545
           + G V+ FR LVYAGA+VKL NK G+TA+ LSE N N DLFEKV+LE+ALE+GN  + GF
Sbjct: 495 AGGQVDAFRLLVYAGANVKLQNKYGETALTLSEANHNADLFEKVILEYALERGNHRSAGF 554

Query: 546 YALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDI 605
           Y LHCAAR GDLD  R L +RGY +N  D DGYTPLMLAAR GHG MCE LIS GA+C+I
Sbjct: 555 YPLHCAARCGDLDLARTLANRGYDINFADTDGYTPLMLAARGGHGSMCEFLISCGAICNI 614

Query: 606 KNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHRKDIRML 665
           KN R ETAL LARKN    N AE VILDE+AR LVL G  V KHTK GKGTPH K ++M+
Sbjct: 615 KNERHETALVLARKN-GFGNGAERVILDELARTLVLDGAPVKKHTKRGKGTPHCKLLKMV 673

Query: 666 GSEGVLRWGNSRRRNVICREAKLGPSPAFQKNRRGKGDVNEPGVFHIVTTKNNEVHFVCQ 725
              GVLRWG S +RNVICR A+LGPS +F+ NRR K D +EPG+FH++TTKN EVHFVC+
Sbjct: 674 DGIGVLRWGKSSKRNVICRGAELGPSTSFRWNRRRKIDADEPGLFHVMTTKNKEVHFVCE 733

Query: 726 GGLEMAELWVRGIMLVTKAAMHG 748
           GG+E+AELWVRGI LVT+ A+ G
Sbjct: 734 GGIEVAELWVRGIKLVTREAIFG 756

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359473567|ref|XP_002265470.2| PREDICTED: ankyrin-2-like [Vitis vinifera]

 Score = 1035 bits (2676), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 503/743 (67%), Positives = 605/743 (81%), Gaps = 2/743 (0%)

Query: 7   RQVVPVDYEAEVSQRLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEVVLREGK 66
           +QV P+DY AEVSQ+L++A+   DLKSA +CIADP+VDV+F+G V L+ RKTEVVL +  
Sbjct: 14  KQVFPIDYAAEVSQKLVDASHRNDLKSALDCIADPFVDVSFIGTVYLRARKTEVVLHDES 73

Query: 67  PSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLE 126
           P EVRVEFEEFK++VTALFLAAH+GNV LV+KLLS GA+VNQKLFRG+ATT AVREGHLE
Sbjct: 74  PHEVRVEFEEFKTEVTALFLAAHAGNVALVRKLLSVGANVNQKLFRGYATTAAVREGHLE 133

Query: 127 ILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDV 186
           IL+ L+ AGASQPACEEALLEAS  G+AR AELLMGS++IRP+ AVH+LVTACCRGFVDV
Sbjct: 134 ILQTLINAGASQPACEEALLEASYLGRARPAELLMGSEMIRPYAAVHALVTACCRGFVDV 193

Query: 187 VDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMK 246
           VDTL+KCGVD NATDR+LLQS KP +HTNV+C+AL  A+VSRQVSVV+LLLQAG   D+K
Sbjct: 194 VDTLIKCGVDANATDRMLLQSSKPFMHTNVNCNALAVAIVSRQVSVVRLLLQAGVRVDIK 253

Query: 247 VRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRT 306
           VRLGAWSWDT TGEEFRVG GLAEPY+ITWCAVEYFE +G+ILRMLLQH S N+ H GRT
Sbjct: 254 VRLGAWSWDTATGEEFRVGVGLAEPYSITWCAVEYFEASGAILRMLLQHHSVNNHHLGRT 313

Query: 307 LLHHAILCGCTGAVAVLLSCGADAQCPIR-TQKTEFHPIHLAARLGYSTIVQSLIDSGCD 365
           L+HHAILCG  GA+ VLL+CGAD + P++ T KTE  PIHLAA+ G + I+Q LI++GC+
Sbjct: 314 LVHHAILCGNPGALDVLLNCGADVELPVKTTSKTELRPIHLAAQFGLAKILQCLINAGCN 373

Query: 366 LNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRA 425
           LN+ T SGE+ALMI  +YK +EC++VLA AGADFGLV+ +GQ A SIA S  W++GF++A
Sbjct: 374 LNSPTASGESALMICTRYKHDECLRVLAAAGADFGLVNAAGQCACSIASSIRWTLGFRQA 433

Query: 426 VLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAA 485
           VLD+I +G+   SSN ++FSPL+F  QA D  ALK LI R ++++D QD NG SA M+AA
Sbjct: 434 VLDVIHAGSTVASSNTSIFSPLIFATQANDAVALKKLIERPDIDIDEQDQNGLSAAMIAA 493

Query: 486 SKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGF 545
           + G V+ FR LVYAGA+VKL NK G+TA+ LSE N N DLFEKV+LE+ALE+GN  + GF
Sbjct: 494 AGGQVDAFRLLVYAGANVKLQNKYGETALTLSEANHNADLFEKVILEYALERGNHRSAGF 553

Query: 546 YALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDI 605
           Y LHCAAR GDLD  R L +RGY +N  D DGYTPLMLAAR GHG MCE LIS GA+C+I
Sbjct: 554 YPLHCAARCGDLDLARTLANRGYDINFADTDGYTPLMLAARGGHGSMCEFLISCGAICNI 613

Query: 606 KNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHRKDIRML 665
           KN R ETAL LARKN    N AE VILDE+AR LVL G  V KHTK GKGTPH K ++M+
Sbjct: 614 KNERHETALVLARKN-GFGNGAERVILDELARTLVLDGAPVKKHTKRGKGTPHCKLLKMV 672

Query: 666 GSEGVLRWGNSRRRNVICREAKLGPSPAFQKNRRGKGDVNEPGVFHIVTTKNNEVHFVCQ 725
              GVLRWG S +RNVICR A+LGPS +F+ NRR K D +EPG+FH++TTKN EVHFVC+
Sbjct: 673 DGIGVLRWGKSSKRNVICRGAELGPSTSFRWNRRRKIDADEPGLFHVMTTKNKEVHFVCE 732

Query: 726 GGLEMAELWVRGIMLVTKAAMHG 748
           GG+E+AELWVRGI LVT+ A+ G
Sbjct: 733 GGIEVAELWVRGIKLVTREAIFG 755

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|240256292|ref|NP_196927.4| uncharacterized protein [Arabidopsis thaliana] gi|332004620|gb|AED92003.1| uncharacterized protein [Arabidopsis thaliana]

 Score = 1006 bits (2602), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 506/751 (67%), Positives = 603/751 (80%), Gaps = 9/751 (1%)

Query: 1   MTVFSVRQVVPVDYEAEVSQRLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEV 60
           MTVFS RQVVP+DYEAEVSQRLLEA L GD K+A++C++DP VDVNFVGAVSLKTR++EV
Sbjct: 1   MTVFSGRQVVPMDYEAEVSQRLLEAILDGDFKTASDCVSDPLVDVNFVGAVSLKTRRSEV 60

Query: 61  VLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAV 120
           VLR+  PSEVRVE+EEFK+DVTALFLA + GN  LVK+LL+ GADVNQKLFRGFATT+AV
Sbjct: 61  VLRDESPSEVRVEYEEFKTDVTALFLAVNFGNAALVKELLNIGADVNQKLFRGFATTVAV 120

Query: 121 REGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACC 180
           REGH ++ EILLKAGASQPACEEAL+ ASCHG++R  ELLMG+DLIRP VAVH+L TACC
Sbjct: 121 REGHFDVFEILLKAGASQPACEEALVGASCHGRSRFVELLMGTDLIRPQVAVHALATACC 180

Query: 181 RGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAG 240
           RGFVDVV TL+KCGVD N+TDRLLLQS KPSL+TNVDC+ALVAA+V+RQVS V++LLQAG
Sbjct: 181 RGFVDVVGTLLKCGVDANSTDRLLLQSSKPSLYTNVDCTALVAAIVNRQVSAVRVLLQAG 240

Query: 241 ANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNS 300
             TD+ VRLGAWSWDT TGEEFRVGAG+AEPY +TWCAVEYFE +G ILR+LL+  S N+
Sbjct: 241 VKTDIMVRLGAWSWDTNTGEEFRVGAGVAEPYPLTWCAVEYFETSGDILRLLLKLQSPNA 300

Query: 301 PHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQK-TEFHPIHLAARLGYSTIVQSL 359
            H GRTLLHHA+LCG   AV+VLL CGAD + PI+T +  E  PIH+AAR G   I+Q L
Sbjct: 301 LHNGRTLLHHAVLCGNKAAVSVLLDCGADPEAPIKTSRGIELRPIHIAARDGSVEIIQQL 360

Query: 360 IDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWS 419
           +  GCD+N+K + G TAL+IS K+K  ECVKVLA  GADFGLV+  G SA SIA SN WS
Sbjct: 361 VGFGCDINSKNDVGNTALLISIKHKHPECVKVLALDGADFGLVNKFGHSAVSIAESNKWS 420

Query: 420 VGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFS 479
           +G +R +L++IR G +P SSN +VFSPL++ AQAGD  ALKAL+  +++ LDYQD+ GFS
Sbjct: 421 LGLERVILELIRFGVVPHSSNASVFSPLLYGAQAGDAEALKALVKAQDIYLDYQDEEGFS 480

Query: 480 AVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGN 539
           A M+AA  GHVE FR LVYAGADVKL N SG T + LSE N N D+ EKVMLEFALEK +
Sbjct: 481 AAMLAAMNGHVEAFRVLVYAGADVKLYNNSGDTVVSLSEQNGNRDVIEKVMLEFALEKDS 540

Query: 540 RN-AGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLIS 598
           RN AGGFYALHCAARRGD+ AV+LL+ +GY +++PDGDGYTPLMLAAREGHG MCE LIS
Sbjct: 541 RNMAGGFYALHCAARRGDVKAVKLLSGKGYSLDIPDGDGYTPLMLAAREGHGHMCEYLIS 600

Query: 599 NGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPH 658
            GA C+ KN RGE  L LA        DAE VI +E++R  V+ G  V+KHTKGGKG  H
Sbjct: 601 CGANCNAKNGRGEKLLDLA------TGDAEKVIRNELSRRFVIEGSSVMKHTKGGKGKKH 654

Query: 659 RKDIRMLGSEGVLRWGNSRRRNVICREAKLGPSPAFQKNRRGKGD-VNEPGVFHIVTTKN 717
            K +RML S GVL WG SR+R V+C+E ++G S  F+KNR+GKGD   E G+F +VTT+N
Sbjct: 655 GKGLRMLESSGVLSWGKSRKRTVVCKEVEIGMSQRFRKNRKGKGDGAEEEGIFRVVTTEN 714

Query: 718 NEVHFVCQGGLEMAELWVRGIMLVTKAAMHG 748
            EVHFVC+GGL  AE+WVRGI LVT+  + G
Sbjct: 715 KEVHFVCEGGLVCAEMWVRGIRLVTRETICG 745

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	748
TAIR|locus:2145613	751	AT5G14230 [Arabidopsis thalian	0.991	0.988	0.653	6.7e-262
UNIPROTKB|F1M5N3	3838	Ank2 "Protein Ank2" [Rattus no	0.717	0.139	0.256	2.9e-31
UNIPROTKB|F1LM13	1783	Ank3 "Protein Ank3" [Rattus no	0.427	0.179	0.278	5e-31
UNIPROTKB|F1LPH6	1961	Ank3 "Protein Ank3" [Rattus no	0.427	0.163	0.278	6.3e-31
UNIPROTKB|F1PJ90	1782	ANK3 "Uncharacterized protein"	0.406	0.170	0.283	6.4e-31
UNIPROTKB|K7GLA8	1847	ANK3 "Uncharacterized protein"	0.406	0.164	0.283	8.8e-31
MGI|MGI:88026	1961	Ank3 "ankyrin 3, epithelial" [	0.427	0.163	0.278	1.7e-30
UNIPROTKB|K7GSS3	2594	ANK3 "Uncharacterized protein"	0.406	0.117	0.283	2e-30
UNIPROTKB|E1BNC9	3342	ANK3 "Uncharacterized protein"	0.406	0.090	0.283	4.7e-30
UNIPROTKB|F1RG02	4363	ANK3 "Uncharacterized protein"	0.406	0.069	0.283	5.1e-30

TAIR|locus:2145613 AT5G14230 [Arabidopsis thaliana (taxid:3702)]

 Score = 2520 (892.1 bits), Expect = 6.7e-262, P = 6.7e-262
 Identities = 491/751 (65%), Positives = 583/751 (77%)

Query:     1 MTVFSVRQVVPVDYEAEVSQRLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEV 60
             MTVFS RQVVP+DYEAEVSQRLLEA L GD K+A++C++DP VDVNFVGAVSLKTR++EV
Sbjct:     1 MTVFSGRQVVPMDYEAEVSQRLLEAILDGDFKTASDCVSDPLVDVNFVGAVSLKTRRSEV 60

Query:    61 VLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAV 120
             VLR+  PSEVRVE+EEFK+DVTALFLA + GN  LVK+LL+ GADVNQKLFRGFATT+AV
Sbjct:    61 VLRDESPSEVRVEYEEFKTDVTALFLAVNFGNAALVKELLNIGADVNQKLFRGFATTVAV 120

Query:   121 REGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACC 180
             REGH ++ EILLKAGASQPACEEAL+ ASCHG++R  ELLMG+DLIRP VAVH+L TACC
Sbjct:   121 REGHFDVFEILLKAGASQPACEEALVGASCHGRSRFVELLMGTDLIRPQVAVHALATACC 180

Query:   181 RGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCXXXXXXXXXXXXXXXXXXXXXG 240
             RGFVDVV TL+KCGVD N+TDRLLLQS KPSL+TNVDC                     G
Sbjct:   181 RGFVDVVGTLLKCGVDANSTDRLLLQSSKPSLYTNVDCTALVAAIVNRQVSAVRVLLQAG 240

Query:   241 ANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNS 300
               TD+ VRLGAWSWDT TGEEFRVGAG+AEPY +TWCAVEYFE +G ILR+LL+  S N+
Sbjct:   241 VKTDIMVRLGAWSWDTNTGEEFRVGAGVAEPYPLTWCAVEYFETSGDILRLLLKLQSPNA 300

Query:   301 PHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQK-TEFHPIHLAARLGYSTIVQSL 359
              H GRTLLHHA+LCG   AV+VLL CGAD + PI+T +  E  PIH+AAR G   I+Q L
Sbjct:   301 LHNGRTLLHHAVLCGNKAAVSVLLDCGADPEAPIKTSRGIELRPIHIAARDGSVEIIQQL 360

Query:   360 IDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWS 419
             +  GCD+N+K + G TAL+IS K+K  ECVKVLA  GADFGLV+  G SA SIA SN WS
Sbjct:   361 VGFGCDINSKNDVGNTALLISIKHKHPECVKVLALDGADFGLVNKFGHSAVSIAESNKWS 420

Query:   420 VGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFS 479
             +G +R +L++IR G +P SSN +VFSPL++ AQAGD  ALKAL+  +++ LDYQD+ GFS
Sbjct:   421 LGLERVILELIRFGVVPHSSNASVFSPLLYGAQAGDAEALKALVKAQDIYLDYQDEEGFS 480

Query:   480 AVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGN 539
             A M+AA  GHVE FR LVYAGADVKL N SG T + LSE N N D+ EKVMLEFALEK +
Sbjct:   481 AAMLAAMNGHVEAFRVLVYAGADVKLYNNSGDTVVSLSEQNGNRDVIEKVMLEFALEKDS 540

Query:   540 RN-AGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLIS 598
             RN AGGFYALHCAARRGD+ AV+LL+ +GY +++PDGDGYTPLMLAAREGHG MCE LIS
Sbjct:   541 RNMAGGFYALHCAARRGDVKAVKLLSGKGYSLDIPDGDGYTPLMLAAREGHGHMCEYLIS 600

Query:   599 NGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPH 658
              GA C+ KN RGE  L LA        DAE VI +E++R  V+ G  V+KHTKGGKG  H
Sbjct:   601 CGANCNAKNGRGEKLLDLAT------GDAEKVIRNELSRRFVIEGSSVMKHTKGGKGKKH 654

Query:   659 RKDIRMLGSEGVLRWGNSRRRNVICREAKLGPSPAFQKNRRGKGD-VNEPGVFHIVTTKN 717
              K +RML S GVL WG SR+R V+C+E ++G S  F+KNR+GKGD   E G+F +VTT+N
Sbjct:   655 GKGLRMLESSGVLSWGKSRKRTVVCKEVEIGMSQRFRKNRKGKGDGAEEEGIFRVVTTEN 714

Query:   718 NEVHFVCQGGLEMAELWVRGIMLVTKAAMHG 748
              EVHFVC+GGL  AE+WVRGI LVT+  + G
Sbjct:   715 KEVHFVCEGGLVCAEMWVRGIRLVTRETICG 745

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1M5N3 Ank2 "Protein Ank2" [Rattus norvegicus (taxid:10116)]

 Score = 342 (125.4 bits), Expect = 2.9e-31, Sum P(3) = 2.9e-31
 Identities = 148/578 (25%), Positives = 253/578 (43%)

Query:    78 KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT-IAVREGHLEILEILLKAGA 136
             +S  T L +AAH GNV +   LL+ GA V+     G     +A + G+  ++++LL  G 
Sbjct:   209 ESGFTPLHIAAHYGNVNVATLLLNRGAAVDFTARNGITPLHVASKRGNTNMVKLLLDRGG 268

Query:   137 SQPA-CEEALLEASC---HGQARLAELLM--GSDLI-RPHVAVHSLVTACCRGFVDVVDT 189
                A   + L    C    G  ++ ELL+  G+ L+ R    +  L  A     V+ V  
Sbjct:   269 QIDAKTRDGLTPLHCAARSGHDQVVELLLERGAPLLARTKNGLSPLHMAAQGDHVECVKH 328

Query:   190 LMKCGVDINATDRLLLQSLKPSLHTNVDCXXXXXXXXXXXXXXXXXXXXXGANTDMKVRL 249
             L++    +   D + L  L  +LH    C                        T + +  
Sbjct:   329 LLQHKAPV---DDVTLDYLT-ALHVAAHCGHYRVTKLLLDKRANPNARALNGFTPLHI-- 382

Query:   250 GAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITG-----SILRMLLQHLSYNSPHY- 303
              A   +     E  V  G A   AIT   +    +       +I+ +LLQ+ +  SP   
Sbjct:   383 -ACKKNRIKVMELLVKYG-ASIQAITESGLTPIHVAAFMGHLNIVLLLLQNGA--SPDVT 438

Query:   304 ---GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLI 360
                G T LH A   G    V  LL  GA      R ++T   P+H+A+RLG + IVQ L+
Sbjct:   439 NIRGETALHMAARAGQVEVVRCLLRNGALVDARAREEQT---PLHIASRLGKTEIVQLLL 495

Query:   361 DSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSV 420
                   +  T +G T L ISA+  Q +   VL +AGA   L +  G +   +A + + S+
Sbjct:   496 QHMAHPDAATTNGYTPLHISAREGQVDVASVLLEAGAAHSLATKKGFTPLHVA-AKYGSL 554

Query:   421 GFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALI--GREELNLDYQDDNGF 478
                + +L    + +   S+    ++PL   A+   +     L+  G E   +  Q   G 
Sbjct:   555 DVAKLLLQRRAAAD---SAGKNGYTPLHIAAKKNQMQIASTLLNYGAETNTVTKQ---GV 608

Query:   479 SAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG 538
             + + +A+ +GH ++   L+  GA++ +  KSG T++ L+      ++ + ++ +   ++ 
Sbjct:   609 TPLHLASQEGHTDMVTLLLEKGANIHMSTKSGLTSLHLAAQEDKVNVAD-ILTKHGADQD 667

Query:   539 NRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLIS 598
                  G+  L  A   G++  V  L  +G  VN    +GYTPL  AA++GH  +  +L+ 
Sbjct:   668 AYTKLGYTPLIVACHYGNVKMVNFLLKQGANVNAKTKNGYTPLHQAAQQGHTHIINVLLQ 727

Query:   599 NGAVCDIKNARGETALSLARKNSSMKN-DAELVILDEV 635
             +GA  +   A G TAL++A++   +   D   V+ +EV
Sbjct:   728 HGAKPNATTANGNTALAIAKRLGYISVVDTLKVVTEEV 765

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1LM13 Ank3 "Protein Ank3" [Rattus norvegicus (taxid:10116)]

 Score = 291 (107.5 bits), Expect = 5.0e-31, Sum P(2) = 5.0e-31
 Identities = 93/334 (27%), Positives = 153/334 (45%)

Query:   305 RTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGC 364
             +T LH +   G    V  LL  GA    P     + + P+HL+AR G+  +   L+D G 
Sbjct:   460 QTPLHISARLGKADIVQQLLQQGAS---PNAATTSGYTPLHLSAREGHEDVAAFLLDHGA 516

Query:   365 DLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQR 424
              L+  T+ G T L ++AKY + E   +L +  A       SG +   +A         Q+
Sbjct:   517 SLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAH----YDNQK 572

Query:   425 AVLDIIRSGNIPKSSNVAVFSPLMFVAQAG--DIAALKALIGREELNLDYQDDNGFSAVM 482
               L ++  G  P ++    ++PL   A+    DIA      G +   +  Q   G ++V 
Sbjct:   573 VALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATSLLEYGADANAVTRQ---GIASVH 629

Query:   483 VAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNA 542
             +AA +GHV++   L+   A+V L NKSG T + L+      ++ E V++        +  
Sbjct:   630 LAAQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAE-VLVNQGAHVDAQTK 688

Query:   543 GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV 602
              G+  LH     G++  V  L      VN    +GYTPL  AA++GH  +  +L+ N A 
Sbjct:   689 MGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTPLHQAAQQGHTHIINVLLQNNAS 748

Query:   603 CDIKNARGETALSLARKNSSMKN-DAELVILDEV 635
              +     G TAL++AR+   +   D   V+ +E+
Sbjct:   749 PNELTVNGNTALAIARRLGYISVVDTLKVVTEEI 782

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1LPH6 Ank3 "Protein Ank3" [Rattus norvegicus (taxid:10116)]

 Score = 291 (107.5 bits), Expect = 6.3e-31, Sum P(2) = 6.3e-31
 Identities = 93/334 (27%), Positives = 153/334 (45%)

Query:   305 RTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGC 364
             +T LH +   G    V  LL  GA    P     + + P+HL+AR G+  +   L+D G 
Sbjct:   460 QTPLHISARLGKADIVQQLLQQGAS---PNAATTSGYTPLHLSAREGHEDVAAFLLDHGA 516

Query:   365 DLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQR 424
              L+  T+ G T L ++AKY + E   +L +  A       SG +   +A         Q+
Sbjct:   517 SLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAH----YDNQK 572

Query:   425 AVLDIIRSGNIPKSSNVAVFSPLMFVAQAG--DIAALKALIGREELNLDYQDDNGFSAVM 482
               L ++  G  P ++    ++PL   A+    DIA      G +   +  Q   G ++V 
Sbjct:   573 VALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATSLLEYGADANAVTRQ---GIASVH 629

Query:   483 VAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNA 542
             +AA +GHV++   L+   A+V L NKSG T + L+      ++ E V++        +  
Sbjct:   630 LAAQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAE-VLVNQGAHVDAQTK 688

Query:   543 GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV 602
              G+  LH     G++  V  L      VN    +GYTPL  AA++GH  +  +L+ N A 
Sbjct:   689 MGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTPLHQAAQQGHTHIINVLLQNNAS 748

Query:   603 CDIKNARGETALSLARKNSSMKN-DAELVILDEV 635
              +     G TAL++AR+   +   D   V+ +E+
Sbjct:   749 PNELTVNGNTALAIARRLGYISVVDTLKVVTEEI 782

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1PJ90 ANK3 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 289 (106.8 bits), Expect = 6.4e-31, Sum P(2) = 6.4e-31
 Identities = 90/317 (28%), Positives = 146/317 (46%)

Query:   305 RTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGC 364
             +T LH +   G    V  LL  GA    P     + + P+HL+AR G+  +   L+D G 
Sbjct:   500 QTPLHISARLGKADIVQQLLQQGAS---PNAATTSGYTPLHLSAREGHEDVAAFLLDHGA 556

Query:   365 DLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQR 424
              L+  T+ G T L ++AKY + E   +L +  A       SG +   +A         Q+
Sbjct:   557 SLSITTKKGFTPLHVAAKYGKLEVANLLLQKSASPDAAGKSGLTPLHVAAH----YDNQK 612

Query:   425 AVLDIIRSGNIPKSSNVAVFSPLMFVAQAG--DIAALKALIGREELNLDYQDDNGFSAVM 482
               L ++  G  P ++    ++PL   A+    DIA      G +   +  Q   G ++V 
Sbjct:   613 VALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQ---GIASVH 669

Query:   483 VAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNA 542
             +AA +GHV++   L+   A+V L NKSG T + L+      ++ E V++        +  
Sbjct:   670 LAAQEGHVDMVSLLLGRNANVNLSNKSGLTPLHLAAQEDRVNVAE-VLVNQGANVDAQTK 728

Query:   543 GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV 602
              G+  LH     G++  V  L      VN    +GYTPL  AA++GH  +  +L+ N A 
Sbjct:   729 MGYTPLHVGCHYGNIKIVNFLLQHSAKVNARTKNGYTPLHQAAQQGHTHIINVLLQNNAS 788

Query:   603 CDIKNARGETALSLARK 619
              +     G TAL++AR+
Sbjct:   789 PNELTVNGNTALAIARR 805

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|K7GLA8 ANK3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 290 (107.1 bits), Expect = 8.8e-31, Sum P(2) = 8.8e-31
 Identities = 90/317 (28%), Positives = 146/317 (46%)

Query:   305 RTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGC 364
             +T LH +   G    V  LL  GA    P     + + P+HL+AR G+  +   L+D G 
Sbjct:   462 QTPLHISARLGKADIVQQLLQQGAS---PNAATTSGYTPLHLSAREGHEDVAAFLLDHGA 518

Query:   365 DLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQR 424
              L+  T+ G T L ++AKY + E   +L +  A       SG +   +A         Q+
Sbjct:   519 SLSITTKKGFTPLHVAAKYGKLEVANLLLQKSASPDAAGKSGLTPLHVAAH----YDNQK 574

Query:   425 AVLDIIRSGNIPKSSNVAVFSPLMFVAQAG--DIAALKALIGREELNLDYQDDNGFSAVM 482
               L ++  G  P ++    ++PL   A+    DIA      G +   +  Q   G ++V 
Sbjct:   575 VALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQ---GIASVH 631

Query:   483 VAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNA 542
             +AA +GHV++   L+   A+V L NKSG T + L+      ++ E V++        +  
Sbjct:   632 LAAQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAE-VLVNQGAHVDAQTK 690

Query:   543 GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV 602
              G+  LH     G++  V  L      VN    +GYTPL  AA++GH  +  +L+ N A 
Sbjct:   691 MGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTPLHQAAQQGHTHIINVLLQNDAS 750

Query:   603 CDIKNARGETALSLARK 619
              +     G TAL++AR+
Sbjct:   751 PNELTVNGNTALAIARR 767

GO:0007165 "signal transduction" evidence=IEA

MGI|MGI:88026 Ank3 "ankyrin 3, epithelial" [Mus musculus (taxid:10090)]

 Score = 286 (105.7 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
 Identities = 93/334 (27%), Positives = 152/334 (45%)

Query:   305 RTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGC 364
             +T LH +   G    V  LL  GA    P     + + P+HLAAR G+  +   L+D G 
Sbjct:   483 QTPLHISARLGKADIVQQLLQQGAS---PNAATTSGYTPLHLAAREGHEDVAAFLLDHGA 539

Query:   365 DLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQR 424
              L+  T+ G T L ++AKY + E   +L +  A       SG +   +A         Q+
Sbjct:   540 SLSITTKKGFTPLHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAH----YDNQK 595

Query:   425 AVLDIIRSGNIPKSSNVAVFSPLMFVAQAG--DIAALKALIGREELNLDYQDDNGFSAVM 482
               L ++  G  P ++    ++PL   A+    DIA      G +   +  Q   G ++V 
Sbjct:   596 VALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATSLLEYGADANAVTRQ---GIASVH 652

Query:   483 VAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNA 542
             +AA +GHV++   L+   A+V L NKSG T + L+      ++ E V++        +  
Sbjct:   653 LAAQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAE-VLVNQGAHVDAQTK 711

Query:   543 GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV 602
              G+  LH     G++  V  L      VN    +GYT L  AA++GH  +  +L+ N A 
Sbjct:   712 MGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTALHQAAQQGHTHIINVLLQNNAS 771

Query:   603 CDIKNARGETALSLARKNSSMKN-DAELVILDEV 635
              +     G TAL++AR+   +   D   V+ +E+
Sbjct:   772 PNELTVNGNTALAIARRLGYISVVDTLKVVTEEI 805

GO:0000281 "cytokinesis after mitosis" evidence=ISO

GO:0005200 "structural constituent of cytoskeleton" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=IEA

GO:0005764 "lysosome" evidence=IEA

GO:0005856 "cytoskeleton" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISO

GO:0007009 "plasma membrane organization" evidence=ISO

GO:0007165 "signal transduction" evidence=IEA

GO:0007409 "axonogenesis" evidence=IMP

GO:0007411 "axon guidance" evidence=IMP

GO:0010650 "positive regulation of cell communication by electrical coupling" evidence=ISO

GO:0014704 "intercalated disc" evidence=ISO;IDA

GO:0016020 "membrane" evidence=IDA

GO:0016323 "basolateral plasma membrane" evidence=ISO

GO:0016328 "lateral plasma membrane" evidence=ISO

GO:0016529 "sarcoplasmic reticulum" evidence=ISO

GO:0019228 "regulation of action potential in neuron" evidence=IMP

GO:0030018 "Z disc" evidence=ISO

GO:0030054 "cell junction" evidence=IEA

GO:0030424 "axon" evidence=IDA

GO:0030425 "dendrite" evidence=ISO

GO:0031594 "neuromuscular junction" evidence=ISO

GO:0033268 "node of Ranvier" evidence=ISO;IDA

GO:0033270 "paranode region of axon" evidence=IDA

GO:0034112 "positive regulation of homotypic cell-cell adhesion" evidence=ISO

GO:0042383 "sarcolemma" evidence=ISO

GO:0043001 "Golgi to plasma membrane protein transport" evidence=ISO

GO:0043005 "neuron projection" evidence=ISO

GO:0043194 "axon initial segment" evidence=ISO;IDA

GO:0045184 "establishment of protein localization" evidence=ISO

GO:0045202 "synapse" evidence=IDA

GO:0045211 "postsynaptic membrane" evidence=ISO

GO:0045760 "positive regulation of action potential" evidence=TAS

GO:0050808 "synapse organization" evidence=IMP

GO:0071709 "membrane assembly" evidence=ISO

GO:0072659 "protein localization to plasma membrane" evidence=ISO;IDA;IMP

GO:0072660 "maintenance of protein location in plasma membrane" evidence=ISO

GO:0072661 "protein targeting to plasma membrane" evidence=ISO;IMP

GO:0090314 "positive regulation of protein targeting to membrane" evidence=ISO

UNIPROTKB|K7GSS3 ANK3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 290 (107.1 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
 Identities = 90/317 (28%), Positives = 146/317 (46%)

Query:   305 RTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGC 364
             +T LH +   G    V  LL  GA    P     + + P+HL+AR G+  +   L+D G 
Sbjct:   470 QTPLHISARLGKADIVQQLLQQGAS---PNAATTSGYTPLHLSAREGHEDVAAFLLDHGA 526

Query:   365 DLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQR 424
              L+  T+ G T L ++AKY + E   +L +  A       SG +   +A         Q+
Sbjct:   527 SLSITTKKGFTPLHVAAKYGKLEVANLLLQKSASPDAAGKSGLTPLHVAAH----YDNQK 582

Query:   425 AVLDIIRSGNIPKSSNVAVFSPLMFVAQAG--DIAALKALIGREELNLDYQDDNGFSAVM 482
               L ++  G  P ++    ++PL   A+    DIA      G +   +  Q   G ++V 
Sbjct:   583 VALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQ---GIASVH 639

Query:   483 VAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNA 542
             +AA +GHV++   L+   A+V L NKSG T + L+      ++ E V++        +  
Sbjct:   640 LAAQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAE-VLVNQGAHVDAQTK 698

Query:   543 GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV 602
              G+  LH     G++  V  L      VN    +GYTPL  AA++GH  +  +L+ N A 
Sbjct:   699 MGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTPLHQAAQQGHTHIINVLLQNDAS 758

Query:   603 CDIKNARGETALSLARK 619
              +     G TAL++AR+
Sbjct:   759 PNELTVNGNTALAIARR 775

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|E1BNC9 ANK3 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 286 (105.7 bits), Expect = 4.7e-30, Sum P(2) = 4.7e-30
 Identities = 90/317 (28%), Positives = 144/317 (45%)

Query:   305 RTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGC 364
             +T LH +   G    V  LL  GA    P     + + P+HLAAR G+  +   L+D G 
Sbjct:   471 QTPLHISARLGKADIVQQLLQQGAS---PNAATTSGYTPLHLAAREGHEDVAAFLLDHGA 527

Query:   365 DLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQR 424
              L   T+ G T L ++AKY + E   +L +  A       SG +   +A         Q+
Sbjct:   528 SLAITTKKGFTPLHVAAKYGKLEVANLLLQKSASPDAAGKSGLTPLHVAAH----YDNQK 583

Query:   425 AVLDIIRSGNIPKSSNVAVFSPLMFVAQAG--DIAALKALIGREELNLDYQDDNGFSAVM 482
               L ++  G  P ++    ++PL   A+    DIA      G +   +  Q   G ++V 
Sbjct:   584 VALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQ---GIASVH 640

Query:   483 VAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNA 542
             +AA +GHV++   L+   A+V L NKSG   + L+      ++ E V++        +  
Sbjct:   641 LAAQEGHVDMVSLLLSRNANVNLSNKSGLAPLHLAAQEDRVNVAE-VLVNQGAHVDAQTK 699

Query:   543 GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV 602
              G+  LH     G++  V  L      VN    +GYTPL  AA++GH  +  +L+ N A 
Sbjct:   700 MGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTPLHQAAQQGHTHIINVLLQNNAS 759

Query:   603 CDIKNARGETALSLARK 619
              +     G TAL++AR+
Sbjct:   760 PNELTVNGNTALAIARR 776

GO:0072661 "protein targeting to plasma membrane" evidence=IEA

GO:0072660 "maintenance of protein location in plasma membrane" evidence=IEA

GO:0071709 "membrane assembly" evidence=IEA

GO:0050808 "synapse organization" evidence=IEA

GO:0045202 "synapse" evidence=IEA

GO:0043194 "axon initial segment" evidence=IEA

GO:0043001 "Golgi to plasma membrane protein transport" evidence=IEA

GO:0042383 "sarcolemma" evidence=IEA

GO:0033268 "node of Ranvier" evidence=IEA

GO:0019228 "regulation of action potential in neuron" evidence=IEA

GO:0016328 "lateral plasma membrane" evidence=IEA

GO:0014704 "intercalated disc" evidence=IEA

GO:0009925 "basal plasma membrane" evidence=IEA

GO:0007411 "axon guidance" evidence=IEA

GO:0005923 "tight junction" evidence=IEA

GO:0005200 "structural constituent of cytoskeleton" evidence=IEA

GO:0000281 "cytokinesis after mitosis" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|F1RG02 ANK3 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 290 (107.1 bits), Expect = 5.1e-30, Sum P(2) = 5.1e-30
 Identities = 90/317 (28%), Positives = 146/317 (46%)

Query:   305 RTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGC 364
             +T LH +   G    V  LL  GA    P     + + P+HL+AR G+  +   L+D G 
Sbjct:   500 QTPLHISARLGKADIVQQLLQQGAS---PNAATTSGYTPLHLSAREGHEDVAAFLLDHGA 556

Query:   365 DLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQR 424
              L+  T+ G T L ++AKY + E   +L +  A       SG +   +A         Q+
Sbjct:   557 SLSITTKKGFTPLHVAAKYGKLEVANLLLQKSASPDAAGKSGLTPLHVAAH----YDNQK 612

Query:   425 AVLDIIRSGNIPKSSNVAVFSPLMFVAQAG--DIAALKALIGREELNLDYQDDNGFSAVM 482
               L ++  G  P ++    ++PL   A+    DIA      G +   +  Q   G ++V 
Sbjct:   613 VALLLLDQGASPHAAAKNGYTPLHIAAKKNQMDIATTLLEYGADANAVTRQ---GIASVH 669

Query:   483 VAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNA 542
             +AA +GHV++   L+   A+V L NKSG T + L+      ++ E V++        +  
Sbjct:   670 LAAQEGHVDMVSLLLSRNANVNLSNKSGLTPLHLAAQEDRVNVAE-VLVNQGAHVDAQTK 728

Query:   543 GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV 602
              G+  LH     G++  V  L      VN    +GYTPL  AA++GH  +  +L+ N A 
Sbjct:   729 MGYTPLHVGCHYGNIKIVNFLLQHSAKVNAKTKNGYTPLHQAAQQGHTHIINVLLQNDAS 788

Query:   603 CDIKNARGETALSLARK 619
              +     G TAL++AR+
Sbjct:   789 PNELTVNGNTALAIARR 805

GO:0072661 "protein targeting to plasma membrane" evidence=IEA

GO:0072660 "maintenance of protein location in plasma membrane" evidence=IEA

GO:0071709 "membrane assembly" evidence=IEA

GO:0050808 "synapse organization" evidence=IEA

GO:0045202 "synapse" evidence=IEA

GO:0043194 "axon initial segment" evidence=IEA

GO:0043001 "Golgi to plasma membrane protein transport" evidence=IEA

GO:0042383 "sarcolemma" evidence=IEA

GO:0033268 "node of Ranvier" evidence=IEA

GO:0019228 "regulation of action potential in neuron" evidence=IEA

GO:0016328 "lateral plasma membrane" evidence=IEA

GO:0014704 "intercalated disc" evidence=IEA

GO:0009925 "basal plasma membrane" evidence=IEA

GO:0007411 "axon guidance" evidence=IEA

GO:0005923 "tight junction" evidence=IEA

GO:0005200 "structural constituent of cytoskeleton" evidence=IEA

GO:0000281 "cytokinesis after mitosis" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: GSVIVG00020545001 SubName- Full=Chromosome chr14 scaffold_21, whole genome shotgun sequence; (784 aa) (Vitis vinifera)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	748
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-26
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-19
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-18
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	4e-18
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	6e-17
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	7e-17
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-16
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	9e-15
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-14
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	5e-14
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-13
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-13
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-10
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	2e-10
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	3e-10
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	5e-10
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	6e-10
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	6e-10
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	7e-10
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	8e-10
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-09
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	1e-09
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	5e-09
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	6e-09
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	8e-09
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-08
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-08
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	3e-08
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	3e-08
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	3e-08
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-08
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-08
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	6e-08
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	1e-07
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	3e-07
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	3e-07
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	1e-06
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-06
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	1e-06
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	2e-06
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	2e-06
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	2e-06
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	2e-06
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	3e-06
pfam00023	33	pfam00023, Ank, Ankyrin repeat	5e-06
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	9e-06
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	2e-05
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	2e-05
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	2e-05
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	2e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	4e-05
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	9e-05
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-04
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-04
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	2e-04
pfam00023	33	pfam00023, Ank, Ankyrin repeat	2e-04
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	3e-04
pfam00023	33	pfam00023, Ank, Ankyrin repeat	4e-04
pfam00023	33	pfam00023, Ank, Ankyrin repeat	5e-04
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	5e-04
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	6e-04
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	8e-04
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	0.001
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	0.001
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	0.001
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	0.001
PHA02989	494	PHA02989, PHA02989, ankyrin repeat protein; Provis	0.001
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	0.002
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	0.002
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	0.003
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	0.003
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	0.004
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	0.004
PHA02946	446	PHA02946, PHA02946, ankyin-like protein; Provision	0.004

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  104 bits (262), Expect = 1e-26
 Identities = 51/131 (38%), Positives = 77/131 (58%), Gaps = 9/131 (6%)

Query: 471 DYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVM 530
           + +D++G + + +AAS GH+EV + L+  GADV   +  G+T + L+  N + +     +
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLE-----I 55

Query: 531 LEFALEKGN----RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAR 586
           ++  LEKG     R+  G   LH AAR G+LD V+LL   G  VN  D DG TPL LAA+
Sbjct: 56  VKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAK 115

Query: 587 EGHGPMCELLI 597
            GH  + +LL+
Sbjct: 116 NGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 83.6 bits (207), Expect = 4e-19
 Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 3/107 (2%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
            GRT LH A   G    V +LL  GAD        +T   P+HLAA+ G+  IV+ L++ 
Sbjct: 6   DGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRT---PLHLAAKNGHLEIVKLLLEK 62

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSA 409
           G D+N + + G T L ++A+    + VK+L K GAD       G++ 
Sbjct: 63  GADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTP 109

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 80.8 bits (200), Expect = 1e-18
 Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 5/92 (5%)

Query: 308 LHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLN 367
           LH A   G    V +LL  GAD    +    T+   +HLAAR G   IV+ L++ G D+N
Sbjct: 1   LHLAAKNGNLELVKLLLEKGAD----VNLGDTDT-ALHLAARNGNLEIVKLLLEHGADVN 55

Query: 368 TKTESGETALMISAKYKQEECVKVLAKAGADF 399
            K + G TAL ++A+    E VK+L + GAD 
Sbjct: 56  AKDKDGNTALHLAARNGNLEIVKLLLEHGADI 87

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 79.2 bits (196), Expect = 4e-18
 Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 36/126 (28%)

Query: 482 MVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRN 541
            +AA  G++E+ + L+  GADV L +                                  
Sbjct: 2   HLAAKNGNLELVKLLLEKGADVNLGDTD-------------------------------- 29

Query: 542 AGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGA 601
                ALH AAR G+L+ V+LL   G  VN  D DG T L LAAR G+  + +LL+ +GA
Sbjct: 30  ----TALHLAARNGNLEIVKLLLEHGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGA 85

Query: 602 VCDIKN 607
             ++K+
Sbjct: 86  DINLKD 91

Length = 91

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 80.6 bits (198), Expect = 6e-17
 Identities = 51/197 (25%), Positives = 79/197 (40%), Gaps = 13/197 (6%)

Query: 423 QRAVLDIIRSGNIPKSSNVAVFSPLM----FVAQAGDIAALKALIGREELNLDYQDDNGF 478
              ++ ++   ++  S+       L      +  A     L  LI    L    +D +G 
Sbjct: 17  DLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDRHLA--ARDLDGR 74

Query: 479 SAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG 538
             +  AASKG  ++ + L+ +GADV   +  G T + L+ LN N       + +  LE G
Sbjct: 75  LPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAG 134

Query: 539 N-------RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGP 591
                   R+  G   LH AA  GD D V LL   G   N  +  G T L  AA+ G   
Sbjct: 135 ADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIE 194

Query: 592 MCELLISNGAVCDIKNA 608
           + +LL+  G    +   
Sbjct: 195 LVKLLLDKGLHLSLLKF 211

Length = 235

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 77.0 bits (190), Expect = 7e-17
 Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 5/107 (4%)

Query: 288 ILRMLLQHLS--YNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIH 345
           ++++LL++ +      + GRT LH A   G    V +LL  GAD     +   T   P+H
Sbjct: 22  VVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNT---PLH 78

Query: 346 LAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVL 392
           LAAR G   +V+ L+  G D+N + + G T L ++AK    E VK+L
Sbjct: 79  LAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLL 125

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 75.5 bits (186), Expect = 2e-16
 Identities = 40/155 (25%), Positives = 70/155 (45%), Gaps = 38/155 (24%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
           P+HLAA  G+  +V+ L+++G D+N K   G T L ++AK    E VK+L + GAD    
Sbjct: 10  PLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNAR 69

Query: 403 SVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKAL 462
              G                                      +PL   A+ G++  +K L
Sbjct: 70  DKDGN-------------------------------------TPLHLAARNGNLDVVKLL 92

Query: 463 IGREELNLDYQDDNGFSAVMVAASKGHVEVFRELV 497
           + +   +++ +D +G + + +AA  GH+EV + L+
Sbjct: 93  L-KHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 70.0 bits (172), Expect = 9e-15
 Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 6/85 (7%)

Query: 548 LHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKN 607
           LH AA+ G+L+ V+LL  +G  VN+  GD  T L LAAR G+  + +LL+ +GA  + K+
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNL--GDTDTALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 608 ARGETALSLARKNSSMKNDAELVIL 632
             G TAL LA    +   + E+V L
Sbjct: 59  KDGNTALHLA----ARNGNLEIVKL 79

Length = 91

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 69.3 bits (170), Expect = 4e-14
 Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 38/159 (23%)

Query: 367 NTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAV 426
           N + E G T L ++A     E VK+L + GAD       G+                   
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGR------------------- 41

Query: 427 LDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAAS 486
                             +PL   A+ G +  +K L+ +   +++ +D +G + + +AA 
Sbjct: 42  ------------------TPLHLAAKNGHLEIVKLLLEKGA-DVNARDKDGNTPLHLAAR 82

Query: 487 KGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDL 525
            G+++V + L+  GADV   +K G+T + L+  N + ++
Sbjct: 83  NGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEV 121

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 75.7 bits (186), Expect = 5e-14
 Identities = 55/175 (31%), Positives = 91/175 (52%), Gaps = 6/175 (3%)

Query: 434 NIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVF 493
           N  +  +  + S L+ VA  G+ A L+ L+ + +L+ D  D  G + + +AASKG+ +  
Sbjct: 516 NGGEHDDPNMASNLLTVASTGNAALLEELL-KAKLDPDIGDSKGRTPLHIAASKGYEDCV 574

Query: 494 RELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHC-AA 552
             L+    +V + + +G TA+  +   ++  +F +++  FA    + +A G   L C AA
Sbjct: 575 LVLLKHACNVHIRDANGNTALWNAISAKHHKIF-RILYHFA-SISDPHAAG--DLLCTAA 630

Query: 553 RRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKN 607
           +R DL A++ L  +G  V+  D  G T L +A  E H  M  LLI NGA  D  N
Sbjct: 631 KRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKAN 685

Length = 823

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 67.8 bits (166), Expect = 1e-13
 Identities = 49/157 (31%), Positives = 68/157 (43%), Gaps = 40/157 (25%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPA 140
           T L LAA +G++ +VK LL  GADVN K   G     +A + GHLEI+++LL+ GA    
Sbjct: 9   TPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGAD--- 65

Query: 141 CEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINAT 200
               +      G   L            H+       A   G +DVV  L+K G D+NA 
Sbjct: 66  ----VNARDKDGNTPL------------HL-------AARNGNLDVVKLLLKHGADVNAR 102

Query: 201 DRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL 237
           D                 + L  A  +  + VV+LLL
Sbjct: 103 D-------------KDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 65.7 bits (161), Expect = 2e-13
 Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 37/128 (28%)

Query: 447 LMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLL 506
           L   A+ G++  +K L+   E   D    +  +A+ +AA  G++E+ + L+  GADV   
Sbjct: 1   LHLAAKNGNLELVKLLL---EKGADVNLGDTDTALHLAARNGNLEIVKLLLEHGADVNAK 57

Query: 507 NKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSR 566
           +K G TA                                  LH AAR G+L+ V+LL   
Sbjct: 58  DKDGNTA----------------------------------LHLAARNGNLEIVKLLLEH 83

Query: 567 GYGVNVPD 574
           G  +N+ D
Sbjct: 84  GADINLKD 91

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 57.7 bits (140), Expect = 2e-10
 Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 1/56 (1%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGA 136
           TAL LAA +GN+ +VK LL  GADVN K   G  A  +A R G+LEI+++LL+ GA
Sbjct: 30  TALHLAARNGNLEIVKLLLEHGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGA 85

Length = 91

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 64.1 bits (156), Expect = 2e-10
 Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 19/163 (11%)

Query: 347 AARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSG 406
            A  G + +++ L+ +  D +     G T L I+A    E+CV VL K   +  +   +G
Sbjct: 532 VASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANG 591

Query: 407 QSA---SSIAGSN---WWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALK 460
            +A   +  A  +        F     D   +G++           L   A+  D+ A+K
Sbjct: 592 NTALWNAISAKHHKIFRILYHFASIS-DPHAAGDL-----------LCTAAKRNDLTAMK 639

Query: 461 ALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADV 503
            L+ ++ LN+D +D  G +A+ VA ++ HV++ R L+  GADV
Sbjct: 640 ELL-KQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADV 681

Length = 823

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 56.9 bits (138), Expect = 3e-10
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 287 SILRMLLQHLSYNSPHYGRTL--LHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPI 344
            ++++LL+       + G T   LH A   G    V +LL  GAD     +   T    +
Sbjct: 11  ELVKLLLEK--GADVNLGDTDTALHLAARNGNLEIVKLLLEHGADVNAKDKDGNT---AL 65

Query: 345 HLAARLGYSTIVQSLIDSGCDLNTK 369
           HLAAR G   IV+ L++ G D+N K
Sbjct: 66  HLAARNGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 56.5 bits (137), Expect = 5e-10
 Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 27/118 (22%)

Query: 84  LFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPACEE 143
           L LAA +GN+ LVK LL  GADVN       A  +A R G+LEI+++LL+ GA       
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLG-DTDTALHLAARNGNLEIVKLLLEHGAD------ 53

Query: 144 ALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATD 201
            +      G                     +L  A   G +++V  L++ G DIN  D
Sbjct: 54  -VNAKDKDGNT-------------------ALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 59.8 bits (144), Expect = 6e-10
 Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 5/100 (5%)

Query: 302 HYGRTLLHHAILCG-----CTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIV 356
             G T LH A L G           +LL  GAD        +    P+H AA  G + IV
Sbjct: 104 ADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIV 163

Query: 357 QSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAG 396
           + L+++G D N++   G TAL  +AK  + E VK+L   G
Sbjct: 164 ELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG 203

Length = 235

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 61.5 bits (149), Expect = 6e-10
 Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 4/180 (2%)

Query: 444 FSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADV 503
            SP+    +  D  A+K L+    +  D +  +  S +  A  +G V+   EL+  G   
Sbjct: 36  ISPIKLAMKFRDSEAIKLLMKHGAIP-DVKYPDIESELHDAVEEGDVKAVEELLDLGKFA 94

Query: 504 K-LLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRL 562
             +  K G T + L+ + +  D+  K+++    +    N   F  LH A   GD+  + L
Sbjct: 95  DDVFYKDGMTPLHLATILKKLDIM-KLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIEL 153

Query: 563 LTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGE-TALSLARKNS 621
           L      +++ D  G TPL++A  +G   +C++L+ +GA  D     G   AL  A +N+
Sbjct: 154 LIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENN 213

Length = 413

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 61.6 bits (150), Expect = 7e-10
 Identities = 62/246 (25%), Positives = 100/246 (40%), Gaps = 17/246 (6%)

Query: 355 IVQSLIDSGCDLNTKTESGETALMISAKYKQEE-CVKVLAKAGADFGLVSVSGQSASSIA 413
           IV+ L+++G D+N     G T L +          +K+L KAGAD       G++   + 
Sbjct: 65  IVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHVY 124

Query: 414 GSNWWSVGFQRAVLDI-IRSGNIPKSSNVAVFSPL-MFVAQAG-DIAALKALIGREELNL 470
            S +        V+ + +R G    + ++   +PL + +     ++  L+ LI     ++
Sbjct: 125 LSGFNINPK---VIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLI-DAGADV 180

Query: 471 DYQDDNGFSA--VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEK 528
              DD   S     + + K    + REL+ AG D    +  G T   L  +         
Sbjct: 181 YAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNT--PLHSMATGSSCKRS 238

Query: 529 VMLEFALEKG----NRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLA 584
           ++L   L  G     RN  G   LH AA   +  A R L + G  +N    DG TPL L 
Sbjct: 239 LVLPL-LIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLM 297

Query: 585 AREGHG 590
            R  +G
Sbjct: 298 VRNNNG 303

Length = 471

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 55.7 bits (135), Expect = 8e-10
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 344 IHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVS 403
           +HLAA+ G   +V+ L++ G D+N       TAL ++A+    E VK+L + GAD     
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 404 VSGQSA 409
             G +A
Sbjct: 59  KDGNTA 64

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 55.7 bits (135), Expect = 1e-09
 Identities = 29/131 (22%), Positives = 54/131 (41%), Gaps = 40/131 (30%)

Query: 377 LMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIP 436
           L ++AK    E VK+L + GAD  L            G                      
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNL------------GDTD------------------- 29

Query: 437 KSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFREL 496
                   + L   A+ G++  +K L+     +++ +D +G +A+ +AA  G++E+ + L
Sbjct: 30  --------TALHLAARNGNLEIVKLLL-EHGADVNAKDKDGNTALHLAARNGNLEIVKLL 80

Query: 497 VYAGADVKLLN 507
           +  GAD+ L +
Sbjct: 81  LEHGADINLKD 91

Length = 91

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 60.4 bits (147), Expect = 1e-09
 Identities = 48/200 (24%), Positives = 88/200 (44%), Gaps = 24/200 (12%)

Query: 429 IIRSGNIPKSSNVAVFSPLMFVAQA----GDIAALKALIGREELNLDYQDDNGFSAVMVA 484
           ++ +G    SS     +PL +++       D+  +  L+     N++  D+NG + ++ A
Sbjct: 54  LLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYA 113

Query: 485 ASK--GHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG-NRN 541
            SK      +   L+  GA+V + N  G+  + L  L  N    +  +L+  ++KG + N
Sbjct: 114 ISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLY-LESNKIDLK--ILKLLIDKGVDIN 170

Query: 542 AGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGA 601
           A               + V  L S G  +N+ D  G+TPL  A    +    + L+  GA
Sbjct: 171 A--------------KNRVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGA 216

Query: 602 VCDIKNARGETALSLARKNS 621
             ++ N  G+T L +A  N+
Sbjct: 217 NPNLVNKYGDTPLHIAILNN 236

Length = 422

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 52.2 bits (126), Expect = 5e-09
 Identities = 21/51 (41%), Positives = 30/51 (58%)

Query: 547 ALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLI 597
           ALH AA  G L+ V+ L  +G  +N  D DG T L +AA  G+  + +LL+
Sbjct: 4   ALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 58.8 bits (142), Expect = 6e-09
 Identities = 45/189 (23%), Positives = 88/189 (46%), Gaps = 22/189 (11%)

Query: 453 AGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLN----- 507
           +GDI A++ +I  +   ++   D   + ++ A   G  ++    +  GAD+  +N     
Sbjct: 11  SGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPH 70

Query: 508 ------KSGKTAIMLSELNQNCDL-------FEKVMLEFALEKG----NRNAGGFYALHC 550
                 K G   I+   ++   D         EK M++  L+ G     ++A     LH 
Sbjct: 71  PLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHY 130

Query: 551 AARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARG 610
           A ++GDL+++++L   G  VN+ D +G  P+ +A +     + +LL+  GA  ++K+  G
Sbjct: 131 AIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNG 190

Query: 611 ETALSLARK 619
           E+ L  A +
Sbjct: 191 ESPLHNAAE 199

Length = 434

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 58.1 bits (140), Expect = 8e-09
 Identities = 67/287 (23%), Positives = 122/287 (42%), Gaps = 37/287 (12%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
           P+  A R G + IV+  I  G D+N         L+ + K    + +K+L   G D  ++
Sbjct: 38  PLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSIL 97

Query: 403 SVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKAL 462
            +       I           + +LD     NI K + +  F  L +  + GD+ ++K L
Sbjct: 98  PIPCIEKDMI-----------KTILDCGIDVNI-KDAELKTF--LHYAIKKGDLESIKML 143

Query: 463 IG-REELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQ 521
                ++N+  +DDNG   + +A      ++ + L+  GA   + + +G++      L+ 
Sbjct: 144 FEYGADVNI--EDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESP-----LHN 196

Query: 522 NCDLFEKVMLEFALEKGN----RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDG 577
             +  +   ++  ++ GN    +   GF  LH A    +  A+ LL +    +N  D DG
Sbjct: 197 AAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIH-NRSAIELLINNA-SINDQDIDG 254

Query: 578 YTPLMLAAREGHGPMC-----ELLISNGAVCDIKNARGETALSLARK 619
            TPL  A      P C     ++L+ + A   IK+ +GE  +  A K
Sbjct: 255 STPLHHAIN----PPCDIDIIDILLYHKADISIKDNKGENPIDTAFK 297

Length = 434

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 52.6 bits (127), Expect = 1e-08
 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 41/129 (31%)

Query: 118 IAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVT 177
           +A + G+LE++++LL+ GA                           +L     A+H    
Sbjct: 3   LAAKNGNLELVKLLLEKGAD-------------------------VNLGDTDTALH---L 34

Query: 178 ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL 237
           A   G +++V  L++ G D+NA D+                +AL  A  +  + +V+LLL
Sbjct: 35  AARNGNLEIVKLLLEHGADVNAKDKD-------------GNTALHLAARNGNLEIVKLLL 81

Query: 238 QAGANTDMK 246
           + GA+ ++K
Sbjct: 82  EHGADINLK 90

Length = 91

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 52.8 bits (127), Expect = 2e-08
 Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 10/76 (13%)

Query: 571 NVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELV 630
           N  D DG TPL LAA  GH  + +LL+ NGA  + K+  G T L LA KN  +       
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHL------- 53

Query: 631 ILDEVARMLVLGGGHV 646
              E+ ++L+  G  V
Sbjct: 54  ---EIVKLLLEKGADV 66

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 54.8 bits (131), Expect = 3e-08
 Identities = 39/134 (29%), Positives = 56/134 (41%), Gaps = 12/134 (8%)

Query: 338 KTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQE-----ECVKVL 392
                P+H AA  G   IV+ L+ SG D+N K   G+T L ++A          E  K+L
Sbjct: 71  LDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLL 130

Query: 393 AKAGA---DFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMF 449
            +AGA      L    G +    A  N    G    V  ++ +G  P S N    + L  
Sbjct: 131 LEAGADLDVNNLRDEDGNTPLHWAALN----GDADIVELLLEAGADPNSRNSYGVTALDP 186

Query: 450 VAQAGDIAALKALI 463
            A+ G I  +K L+
Sbjct: 187 AAKNGRIELVKLLL 200

Length = 235

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 56.2 bits (136), Expect = 3e-08
 Identities = 53/232 (22%), Positives = 84/232 (36%), Gaps = 46/232 (19%)

Query: 184 VDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANT 243
           +DVV  L+  G DIN++ +     L     +N+         ++    +V+LLL+ GAN 
Sbjct: 48  IDVVKILLDNGADINSSTKNNSTPL--HYLSNI------KYNLTDVKEIVKLLLEYGANV 99

Query: 244 DMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLS--YNSP 301
           +     G                 L   YAI+  +  Y     SI+  LL + +      
Sbjct: 100 NAPDNNGITP--------------LL--YAISKKSNSY-----SIVEYLLDNGANVNIKN 138

Query: 302 HYGRTLLHHAILCGC--TGAVAVLLSCGADA------------QCPIR-TQKTEFHPIHL 346
             G  LLH  +         + +L+  G D               PI       F P+H 
Sbjct: 139 SDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRVNYLLSYGVPINIKDVYGFTPLHY 198

Query: 347 AARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
           A        V+ L+D G + N   + G+T L I+     +E  K+L   G  
Sbjct: 199 AVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPS 250

Length = 422

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 50.0 bits (120), Expect = 3e-08
 Identities = 19/48 (39%), Positives = 30/48 (62%)

Query: 570 VNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLA 617
           +N  DG+G TPL LAA+ G   + + L+  G   +++++ G TAL LA
Sbjct: 9   LNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 52.0 bits (125), Expect = 4e-08
 Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 42/154 (27%)

Query: 175 LVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQ 234
           L  A   G ++VV  L++ G D+NA D             N   + L  A  +  + +V+
Sbjct: 11  LHLAASNGHLEVVKLLLENGADVNAKD-------------NDGRTPLHLAAKNGHLEIVK 57

Query: 235 LLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEP--YAITWCAVEYFEITGSILRML 292
           LLL+ GA+ + + + G    +T              P   A     ++       ++++L
Sbjct: 58  LLLEKGADVNARDKDG----NT--------------PLHLAARNGNLD-------VVKLL 92

Query: 293 LQHLSYNSP--HYGRTLLHHAILCGCTGAVAVLL 324
           L+H +  +     GRT LH A   G    V +LL
Sbjct: 93  LKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 52.0 bits (125), Expect = 4e-08
 Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 39/133 (29%)

Query: 118 IAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVT 177
           +A   GHLE++++LL+ GA   A           G+  L            H+A      
Sbjct: 13  LAASNGHLEVVKLLLENGADVNAK-------DNDGRTPL------------HLA------ 47

Query: 178 ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL 237
               G +++V  L++ G D+NA D+                + L  A  +  + VV+LLL
Sbjct: 48  -AKNGHLEIVKLLLEKGADVNARDKD-------------GNTPLHLAARNGNLDVVKLLL 93

Query: 238 QAGANTDMKVRLG 250
           + GA+ + + + G
Sbjct: 94  KHGADVNARDKDG 106

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 55.4 bits (134), Expect = 6e-08
 Identities = 46/188 (24%), Positives = 76/188 (40%), Gaps = 26/188 (13%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQK------LFRGFATTIAVREGHLEILEIL 131
           K  V  L+LA  + N+ +VK LL  GAD+N             +          EI+++L
Sbjct: 33  KKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLL 92

Query: 132 LKAGASQPACEE------ALLEASCHGQARLAELL--MGSDL----IRPHVAVHSLVTAC 179
           L+ GA+  A +           +       + E L   G+++          +H L    
Sbjct: 93  LEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLH-LYLES 151

Query: 180 CRGFVDVVDTLMKCGVDINATDRL-LLQSLKPSLHTNV----DCSALVAAVVSRQVSVVQ 234
            +  + ++  L+  GVDINA +R+  L  L   +  N+      + L  AV +     V+
Sbjct: 152 NKIDLKILKLLIDKGVDINAKNRVNYL--LSYGVPINIKDVYGFTPLHYAVYNNNPEFVK 209

Query: 235 LLLQAGAN 242
            LL  GAN
Sbjct: 210 YLLDLGAN 217

Length = 422

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 54.3 bits (131), Expect = 1e-07
 Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 34/212 (16%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMI--SAKYKQE---ECVKVLAKAGA 397
           P++LA       +V+ L+D+G D+N+ T++  T L    + KY      E VK+L + GA
Sbjct: 38  PLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGA 97

Query: 398 DFGLVSVSGQSASSIAGSNWWSVGFQRAVLDII-----RSGNIPKSSNVAVFSPLMFVAQ 452
           +      +G +    A S       +     I+        N+    N    + L    +
Sbjct: 98  NVNAPDNNGITPLLYAISK------KSNSYSIVEYLLDNGANV-NIKNSDGENLLHLYLE 150

Query: 453 AG--DIAALKALIGR-------EELNL--------DYQDDNGFSAVMVAASKGHVEVFRE 495
           +   D+  LK LI +         +N         + +D  GF+ +  A    + E  + 
Sbjct: 151 SNKIDLKILKLLIDKGVDINAKNRVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKY 210

Query: 496 LVYAGADVKLLNKSGKTAIMLSELNQNCDLFE 527
           L+  GA+  L+NK G T + ++ LN N ++F+
Sbjct: 211 LLDLGANPNLVNKYGDTPLHIAILNNNKEIFK 242

Length = 422

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 47.3 bits (113), Expect = 3e-07
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 323 LLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMI 379
           LL  G        T      P+HLAA+ G   +VQ L+  G DLN +   G TAL +
Sbjct: 1   LLEHGPID--LNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDL 55

Length = 56

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 53.0 bits (127), Expect = 3e-07
 Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 5/109 (4%)

Query: 528 KVMLEFALE--KGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAA 585
           K++L +  +    +R+ G   ALH A    D     LL S G  VN+PD    +PL  A 
Sbjct: 151 KLLLSYGADINMKDRHKGN-TALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAV 209

Query: 586 REGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDE 634
           +  + P+  +L+ NGA  D ++  G T L ++      K+   L +L E
Sbjct: 210 KHYNKPIVHILLENGASTDARDKCGNTPLHIS--VGYCKDYDILKLLLE 256

Length = 477

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 51.6 bits (124), Expect = 1e-06
 Identities = 77/315 (24%), Positives = 121/315 (38%), Gaps = 69/315 (21%)

Query: 90  SGNVTL--VKKLLSTGADVNQKLFRG-FATTIAVREGH------LEILEILLKAGASQPA 140
           + NVT+  V++LL+ GADVN   FRG +  T      H       +I+ +LL+AGA   A
Sbjct: 22  ASNVTVEEVRRLLAAGADVN---FRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNA 78

Query: 141 CE-------EALLEASCHGQARLAELL--MGSDLIRPHVAVHSLVTACCRGF---VDVVD 188
            E          L  +      + +LL   G+D+        + +     GF     V+ 
Sbjct: 79  PERCGFTPLHLYLYNAT--TLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIR 136

Query: 189 TLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSV--VQLLLQAGANTDMK 246
            L++ G D+NA D                 + L   + SR  +V  ++LL+ AGA+    
Sbjct: 137 LLLRKGADVNALD-------------LYGMTPLAVLLKSRNANVELLRLLIDAGAD---- 179

Query: 247 VRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSP--HYG 304
                        + FR    L   +       + F+    I+R L++     +     G
Sbjct: 180 --------VYAVDDRFRS---LLHHHL------QSFKPRARIVRELIRAGCDPAATDMLG 222

Query: 305 RTLLHH-AILCGCTGAVAV-LLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
            T LH  A    C  ++ + LL  G       R  +T   P+H AA        + LI  
Sbjct: 223 NTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQT---PLHYAAVFNNPRACRRLIAL 279

Query: 363 GCDLNTKTESGETAL 377
           G D+N  +  G T L
Sbjct: 280 GADINAVSSDGNTPL 294

Length = 471

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 45.7 bits (109), Expect = 1e-06
 Identities = 19/53 (35%), Positives = 29/53 (54%)

Query: 340 EFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVL 392
               +H AA  G   +V+ L++ G D+N   E G TAL I+A+    E +K+L
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLL 53

Length = 54

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 51.6 bits (123), Expect = 1e-06
 Identities = 75/342 (21%), Positives = 133/342 (38%), Gaps = 51/342 (14%)

Query: 322 VLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISA 381
           +LL  GAD         T   PIH AA  G + +V  L+  G D+N       + L  + 
Sbjct: 163 MLLEGGADVNAKDIYCIT---PIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAV 219

Query: 382 KYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNV 441
             K  + +K +    ++     +S   A         +   + ++L +  +G    S + 
Sbjct: 220 DSKNIDTIKAIIDNRSNINKNDLSLLKAIR-------NEDLETSLL-LYDAGFSVNSIDD 271

Query: 442 AVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGH-VEVFRELVYAG 500
              +PL   +QA  ++ L   +     +++ ++  G + + + A  G+  E  R L+  G
Sbjct: 272 CKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLG 331

Query: 501 ADVK--------------LLNKSGKTAIMLSELNQNC---DLFEKVMLEFA--------- 534
           ADV                L+++    I L EL  N    D  +K  + +A         
Sbjct: 332 ADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVII 391

Query: 535 ---------LEKGNRNAGGFYALHCA-ARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLA 584
                    +E  ++  G   ALH A        +V+ L  RG  VN  + D  TPL  A
Sbjct: 392 NTLLDYGADIEALSQKIGT--ALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYA 449

Query: 585 AREGHGP-MCELLISNGAVCDIKNARGETALSLARKNSSMKN 625
            ++     + E+L+ NGA  +  N + +  L +A +   + N
Sbjct: 450 CKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIALEYHGIVN 491

Length = 682

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 50.4 bits (120), Expect = 2e-06
 Identities = 41/181 (22%), Positives = 71/181 (39%), Gaps = 39/181 (21%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLN-TKTESGETALMISAKYKQEECVKVLAKAGADFGL 401
            +H A   G    V+ L+D G   +    + G T L ++   K+ + +K+L   GAD   
Sbjct: 71  ELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGAD--- 127

Query: 402 VSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKA 461
                                             P   N   FSPL      GDI  ++ 
Sbjct: 128 ----------------------------------PDIPNTDKFSPLHLAVMMGDIKGIEL 153

Query: 462 LIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQ 521
           LI   +  LD +D  G + +++A +KG + + + L+ +GA++    K+G  A +   +  
Sbjct: 154 LI-DHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIEN 212

Query: 522 N 522
           N
Sbjct: 213 N 213

Length = 413

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 50.8 bits (122), Expect = 2e-06
 Identities = 57/266 (21%), Positives = 108/266 (40%), Gaps = 45/266 (16%)

Query: 302 HYGRTLLHHAILCGC---TGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYS-TIVQ 357
            YG+T LH  +          V +LL  GAD   P R   T   P+HL      +  +++
Sbjct: 45  EYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFT---PLHLYLYNATTLDVIK 101

Query: 358 SLIDSGCDLNTKTESGETALMI--SAKYKQEECVKVLAKAGADFGLVSVSGQSASSI--- 412
            LI +G D+N K + G T L +  S      + +++L + GAD   + + G +  ++   
Sbjct: 102 LLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLK 161

Query: 413 --------------AGSNWWSVGFQRAVL----------------DIIRSGNIPKSSNVA 442
                         AG++ ++V  +   L                ++IR+G  P ++++ 
Sbjct: 162 SRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDML 221

Query: 443 VFSPLMFVAQAGDIAALKA--LIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAG 500
             +PL  +A            L+    ++++ ++  G + +  AA   +    R L+  G
Sbjct: 222 GNTPLHSMATGSSCKRSLVLPLL-IAGISINARNRYGQTPLHYAAVFNNPRACRRLIALG 280

Query: 501 ADVKLLNKSGKTAIMLSELNQNCDLF 526
           AD+  ++  G T + L   N N    
Sbjct: 281 ADINAVSSDGNTPLSLMVRNNNGRAV 306

Length = 471

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 50.8 bits (122), Expect = 2e-06
 Identities = 37/155 (23%), Positives = 63/155 (40%), Gaps = 26/155 (16%)

Query: 502 DVKLLNKSGKTAIMLSELNQNCDLFEKVM-------------LEFALEKG---------N 539
              +  K+ K  IM  +LN +    + V+             ++  L+ G         N
Sbjct: 10  SRIIKVKNIKYIIMEDDLN-DYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNN 68

Query: 540 RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAARE--GHGPMCELLI 597
                + +          + V+LL   G  VN PD +G TPL+ A  +      + E L+
Sbjct: 69  STPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLL 128

Query: 598 SNGAVCDIKNARGETALSLARKNSSMKND-AELVI 631
            NGA  +IKN+ GE  L L  +++ +     +L+I
Sbjct: 129 DNGANVNIKNSDGENLLHLYLESNKIDLKILKLLI 163

Length = 422

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 45.0 bits (107), Expect = 2e-06
 Identities = 17/55 (30%), Positives = 31/55 (56%)

Query: 462 LIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIML 516
           L+    ++L+  D NG + + +AA  G +E+ + L+  G D+ L +  G TA+ L
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDL 55

Length = 56

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 50.3 bits (120), Expect = 3e-06
 Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 3/88 (3%)

Query: 305 RTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGC 364
           +T LH+AI  G   ++ +L   GAD    I      + PIH+A +  +  I++ L++ G 
Sbjct: 125 KTFLHYAIKKGDLESIKMLFEYGADVN--IEDDNGCY-PIHIAIKHNFFDIIKLLLEKGA 181

Query: 365 DLNTKTESGETALMISAKYKQEECVKVL 392
             N K  +GE+ L  +A+Y    C+K+L
Sbjct: 182 YANVKDNNGESPLHNAAEYGDYACIKLL 209

Length = 434

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 43.3 bits (103), Expect = 5e-06
 Identities = 15/32 (46%), Positives = 21/32 (65%)

Query: 576 DGYTPLMLAAREGHGPMCELLISNGAVCDIKN 607
           DG TPL LAAR GH  + +LL+  GA  + ++
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARD 32

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 43.0 bits (102), Expect = 9e-06
 Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 1/52 (1%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILL 132
           TAL  AA SG + LVK LL  G D+N+    G  A  IA   G+LE+L++LL
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 47.7 bits (114), Expect = 2e-05
 Identities = 61/271 (22%), Positives = 101/271 (37%), Gaps = 51/271 (18%)

Query: 171 AVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQV 230
            +H  +        D+V  L++ G D+NA +R           T +      A  +    
Sbjct: 50  PLHLYLHYSSEKVKDIVRLLLEAGADVNAPER--------CGFTPLHLYLYNATTLD--- 98

Query: 231 SVVQLLLQAGANTDMKVRLGAWSWDTT-----TGEE---------FRVGAGLAE------ 270
            V++LL++AGA+ + K ++G     T      +G            R GA +        
Sbjct: 99  -VIKLLIKAGADVNAKDKVG----RTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGM 153

Query: 271 -PYAITWCAVEYFEITGSILRMLLQHLS--YNSPHYGRTLLHHAILCGC---TGAVAVLL 324
            P A     ++       +LR+L+   +  Y      R+LLHH  L         V  L+
Sbjct: 154 TPLA---VLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHH-HLQSFKPRARIVRELI 209

Query: 325 SCGADAQCPIRTQKTEFHPIHLAARLGY--STIVQSLIDSGCDLNTKTESGETALMISAK 382
             G D   P  T      P+H  A       ++V  L+ +G  +N +   G+T L  +A 
Sbjct: 210 RAGCD---PAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAV 266

Query: 383 YKQEECVKVLAKAGADFGLVSVSGQSASSIA 413
           +      + L   GAD   VS  G +  S+ 
Sbjct: 267 FNNPRACRRLIALGADINAVSSDGNTPLSLM 297

Length = 471

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 47.4 bits (113), Expect = 2e-05
 Identities = 46/229 (20%), Positives = 91/229 (39%), Gaps = 39/229 (17%)

Query: 320 VAVLLSCGADAQCPIRTQKTEFHPIHLAA--RLGYSTIVQSLIDSGCDLNTKTESGETAL 377
           V +LL  GA+   P         P+  A   +    +IV+ L+D+G ++N K   GE  L
Sbjct: 89  VKLLLEYGANVNAPDNNG---ITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLL 145

Query: 378 MISAKYKQE--ECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNI 435
            +  +  +   + +K+L   G D             I   N          ++ + S  +
Sbjct: 146 HLYLESNKIDLKILKLLIDKGVD-------------INAKN---------RVNYLLSYGV 183

Query: 436 P-KSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFR 494
           P    +V  F+PL +     +   +K L+     N +  +  G + + +A    + E+F+
Sbjct: 184 PINIKDVYGFTPLHYAVYNNNPEFVKYLL-DLGANPNLVNKYGDTPLHIAILNNNKEIFK 242

Query: 495 ELVYAGADVKLLNKSGKTAIMLSELN----QNCDLFEK-VMLEFALEKG 538
            L+  G  +K +    +T +   + +        + +K +M  F L+ G
Sbjct: 243 LLLNNGPSIKTII---ETLLYFKDKDLNTITKIKMLKKSIMYMFLLDPG 288

Length = 422

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 47.4 bits (113), Expect = 2e-05
 Identities = 34/157 (21%), Positives = 55/157 (35%), Gaps = 24/157 (15%)

Query: 490 VEVFRELVYAGADVKLLNKSGKTAIML---SELNQNCDL-FEKVMLEFALEKGNRNAGGF 545
           ++V + L+  GAD+    K+  T +      + N        K++LE+       +  G 
Sbjct: 48  IDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGI 107

Query: 546 YALHCAA--RRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHG--PMCELLISNGA 601
             L  A   +      V  L   G  VN+ + DG   L L          + +LLI  G 
Sbjct: 108 TPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGV 167

Query: 602 ----------------VCDIKNARGETALSLARKNSS 622
                             +IK+  G T L  A  N++
Sbjct: 168 DINAKNRVNYLLSYGVPINIKDVYGFTPLHYAVYNNN 204

Length = 422

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 47.6 bits (113), Expect = 2e-05
 Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 284 ITGSILRMLLQH---LSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTE 340
           I   I ++LL +   ++    H G T LH+A          +LLS GA+   P +T  + 
Sbjct: 145 IEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNS- 203

Query: 341 FHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKY-KQEECVKVLAKAGAD 398
             P+H A +     IV  L+++G   + + + G T L IS  Y K  + +K+L + G D
Sbjct: 204 --PLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVD 260

Length = 477

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 41.2 bits (97), Expect = 4e-05
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 5/55 (9%)

Query: 535 LEKGNRNA-----GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLA 584
           LE G  +       G   LH AA+ G L+ V+ L   G  +N+ D DG T L LA
Sbjct: 2   LEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 45.3 bits (107), Expect = 9e-05
 Identities = 47/216 (21%), Positives = 88/216 (40%), Gaps = 37/216 (17%)

Query: 293 LQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQC-PIRTQKTEFHPIHLAARLG 351
           + H++   PH     L  AI  G    + +L+  G D    PI   + +           
Sbjct: 61  INHINTKIPH----PLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKD----------- 105

Query: 352 YSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASS 411
              ++++++D G D+N K    +T L  + K    E +K+L + GAD  +   +G     
Sbjct: 106 ---MIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIH 162

Query: 412 IA-GSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNL 470
           IA   N++ +     +  ++  G      +    SPL   A+ GD A +K LI       
Sbjct: 163 IAIKHNFFDI-----IKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLI------- 210

Query: 471 DYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLL 506
               D+G + +M     G   +   +++  + ++LL
Sbjct: 211 ----DHG-NHIMNKCKNGFTPLHNAIIHNRSAIELL 241

Length = 434

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 15/76 (19%)

Query: 175 LVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQ 234
           L  A   G +++V  L++ G D+N  D                 +AL  A  +  + +V+
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDT---------------DTALHLAARNGNLEIVK 45

Query: 235 LLLQAGANTDMKVRLG 250
           LLL+ GA+ + K + G
Sbjct: 46  LLLEHGADVNAKDKDG 61

Length = 91

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 14/53 (26%), Positives = 33/53 (62%), Gaps = 1/53 (1%)

Query: 445 SPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELV 497
           + L   A +G +  +K L+ +  ++++  D++G +A+ +AA  G++EV + L+
Sbjct: 3   TALHKAAISGRLELVKYLLEKG-VDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 43.8 bits (103), Expect = 2e-04
 Identities = 43/194 (22%), Positives = 82/194 (42%), Gaps = 29/194 (14%)

Query: 80  DVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFA-TTIAVREGHLEILEILLKAGA-- 136
           D  AL  A   G + + ++LL  G + N +++ G +   +A++    E +++L+K GA  
Sbjct: 2   DQVALCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIP 61

Query: 137 --SQPACEEALLEASCHGQARLAELLMGSDLIRPHV----AVHSLVTACCRGFVDVVDTL 190
               P  E  L +A   G  +  E L+        V     +  L  A     +D++  L
Sbjct: 62  DVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLL 121

Query: 191 MKCGVD--INATDR-----LLLQS---------LKPSLHTNVD----CSALVAAVVSRQV 230
           +  G D  I  TD+     L +           +      +++    C+ L+ A+    +
Sbjct: 122 IARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDI 181

Query: 231 SVVQLLLQAGANTD 244
           ++ ++LL +GAN D
Sbjct: 182 AICKMLLDSGANID 195

Length = 413

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 38.7 bits (91), Expect = 2e-04
 Identities = 14/33 (42%), Positives = 22/33 (66%)

Query: 476 NGFSAVMVAASKGHVEVFRELVYAGADVKLLNK 508
           +G + + +AA  GH+EV + L+ AGADV   +K
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 577 GYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLA 617
           G T L  AA  G   + + L+  G   +  +  G TAL +A
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIA 41

Length = 54

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 37.9 bits (89), Expect = 4e-04
 Identities = 15/28 (53%), Positives = 20/28 (71%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQK 109
           T L LAA +G++ +VK LL  GADVN +
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAR 31

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 37.5 bits (88), Expect = 5e-04
 Identities = 15/31 (48%), Positives = 17/31 (54%)

Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPD 574
           G   LH AAR G L+ V+LL   G  VN  D
Sbjct: 2   GNTPLHLAARNGHLEVVKLLLEAGADVNARD 32

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 43.1 bits (102), Expect = 5e-04
 Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 46  NFVGAVSLKTRKTEVVLREGKPSEVRVE--FEEFKSDVTALFLAAHSGNVTLVKKLLSTG 103
            +V AV           R+  P E+  +    EF   +TAL LAAH  N  +VK LL  G
Sbjct: 92  EYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERG 151

Query: 104 ADVN 107
           A V 
Sbjct: 152 ASVP 155

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 38.0 bits (89), Expect = 6e-04
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 34/87 (39%)

Query: 477 GFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALE 536
           G +A+  AA  G +E+ + L+  G D+   ++ G T                        
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNT------------------------ 36

Query: 537 KGNRNAGGFYALHCAARRGDLDAVRLL 563
                     ALH AA  G+L+ ++LL
Sbjct: 37  ----------ALHIAAENGNLEVLKLL 53

Length = 54

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 42.3 bits (99), Expect = 8e-04
 Identities = 63/341 (18%), Positives = 125/341 (36%), Gaps = 89/341 (26%)

Query: 81  VTALFLAAHSGNVTLVKKLLSTGADVNQ---KLFRGFATTIAVREGHLEILEILLKAGAS 137
            T L  A  SG+  +V+  +  GAD+N    K+     T I +     +I+++L+  G  
Sbjct: 36  TTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAH--DIIKLLIDNGV- 92

Query: 138 QPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDI 197
               + ++L   C  +                               D++ T++ CG+D+
Sbjct: 93  ----DTSILPIPCIEK-------------------------------DMIKTILDCGIDV 117

Query: 198 NATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTT 257
           N  D      LK  LH          A+    +  +++L + GA+ +++   G +     
Sbjct: 118 NIKDA----ELKTFLHY---------AIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIA 164

Query: 258 TGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNS--PHYGRTLLHHAILCG 315
               F                   F+    I+++LL+  +Y +   + G + LH+A   G
Sbjct: 165 IKHNF-------------------FD----IIKLLLEKGAYANVKDNNGESPLHNAAEYG 201

Query: 316 CTGAVAVLLSCGAD--AQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESG 373
               + +L+  G     +C     K  F P+H A  + ++     L+ +   +N +   G
Sbjct: 202 DYACIKLLIDHGNHIMNKC-----KNGFTPLHNA--IIHNRSAIELLINNASINDQDIDG 254

Query: 374 ETALMISAKYK-QEECVKVLAKAGADFGLVSVSGQSASSIA 413
            T L  +       + + +L    AD  +    G++    A
Sbjct: 255 STPLHHAINPPCDIDIIDILLYHKADISIKDNKGENPIDTA 295

Length = 434

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 38.0 bits (89), Expect = 0.001
 Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 31/113 (27%)

Query: 221 LVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVE 280
           L  A  +  + +V+LLL+ GA+ ++         DT T              A+   A  
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLG--------DTDT--------------ALHLAA-- 36

Query: 281 YFEITGS--ILRMLLQH-LSYNSPH-YGRTLLHHAILCGCTGAVAVLLSCGAD 329
                G+  I+++LL+H    N+    G T LH A   G    V +LL  GAD
Sbjct: 37  ---RNGNLEIVKLLLEHGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGAD 86

Length = 91

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 41.5 bits (97), Expect = 0.001
 Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 3/103 (2%)

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
           G T LH A +      + +L++ GAD   P  T K  F P+HLA  +G    ++ LID  
Sbjct: 102 GMTPLHLATILKKLDIMKLLIARGADPDIP-NTDK--FSPLHLAVMMGDIKGIELLIDHK 158

Query: 364 CDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSG 406
             L+ +   G T L+I+         K+L  +GA+      +G
Sbjct: 159 ACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNG 201

Length = 413

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 36.9 bits (86), Expect = 0.001
 Identities = 18/45 (40%), Positives = 23/45 (51%)

Query: 365 DLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSA 409
           DLN    +G T L ++AKY   E V+ L K G D  L    G +A
Sbjct: 8   DLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTA 52

Length = 56

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 42.4 bits (99), Expect = 0.001
 Identities = 72/344 (20%), Positives = 131/344 (38%), Gaps = 81/344 (23%)

Query: 80  DVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQP 139
           D++ L  A  S N+  +K ++   +++N+      +   A+R   LE   +L  AG S  
Sbjct: 211 DLSVLECAVDSKNIDTIKAIIDNRSNINKN---DLSLLKAIRNEDLETSLLLYDAGFSVN 267

Query: 140 A---CEEALLEASCHGQ--ARLAELLM--GSDLIRPHVAVHSLVTACCRGFVDV--VDTL 190
           +   C+   L  +      +RL   L+  G+D+   ++   + +    +   D   + TL
Sbjct: 268 SIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTL 327

Query: 191 MKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLG 250
           +  G D+NA DRL +  L              A+ + R   +V  LL+ GAN +      
Sbjct: 328 IMLGADVNAADRLYITPLHQ------------ASTLDRNKDIVITLLELGANVN------ 369

Query: 251 AWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHH 310
                                      A +Y +                     +T +H+
Sbjct: 370 ---------------------------ARDYCD---------------------KTPIHY 381

Query: 311 AILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKT 370
           A +      +  LL  GAD +   +   T  H   L     Y + V++LID G ++N+K 
Sbjct: 382 AAVRNNVVIINTLLDYGADIEALSQKIGTALH-FALCGTNPYMS-VKTLIDRGANVNSKN 439

Query: 371 ESGETALMISAKYK-QEECVKVLAKAGADFGLVSVSGQSASSIA 413
           +   T L  + K   + + +++L   GAD   +++  Q    IA
Sbjct: 440 KDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIA 483

Length = 682

>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional

 Score = 41.7 bits (98), Expect = 0.001
 Identities = 66/293 (22%), Positives = 118/293 (40%), Gaps = 60/293 (20%)

Query: 355 IVQSLIDSGCDLNTKT--ESGETALM-----ISAKYKQEECVKVLAKAGADFGLVSVSGQ 407
           IV+ LID+G D+N K   E+   A++      S K K+   VK+L K GAD  L + +G 
Sbjct: 52  IVKLLIDNGADVNYKGYIETPLCAVLRNREITSNKIKK--IVKLLLKFGADINLKTFNGV 109

Query: 408 SASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREE 467
           S                 ++  I + NI   +N  +   L+  ++  ++  +K   G   
Sbjct: 110 S----------------PIVCFIYNSNI---NNCDMLRFLL--SKGINVNDVKNSRGYNL 148

Query: 468 LNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFE 527
           L++  +    FS           +V + L+  G ++           M   L  + D+  
Sbjct: 149 LHMYLE---SFSV--------KKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVIS 197

Query: 528 KVMLEFALEKG-NRNAGGFYALHCAARRGDLDAVRLLTSRGYGV----------NVPDGD 576
             ++++ ++KG N           +     LD  ++L+ + + V          N  D  
Sbjct: 198 IKVIKYLIKKGVNIETNNN--GSESVLESFLDNNKILSKKEFKVLNFILKYIKINKKDKK 255

Query: 577 GYTPLMLAAREGHGPMCELLISNGAVCDIKNA--RGETALSLARK--NSSMKN 625
           G+ PL+++A+  +      L+  G   DI N    G+T L+ A K  N  M N
Sbjct: 256 GFNPLLISAKVDNYEAFNYLLKLGD--DIYNVSKDGDTVLTYAIKHGNIDMLN 306

Length = 494

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 41.4 bits (97), Expect = 0.002
 Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 19/167 (11%)

Query: 84  LFLAAHSGNVTLVKKLLSTGADVNQKLFRG-FATTIAVREGHLEILEILLKAGAS----Q 138
           L   A +GN  L+++LL    D +    +G     IA  +G+ + + +LLK   +     
Sbjct: 529 LLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRD 588

Query: 139 PACEEALLEASCHGQARLAELLMG-SDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDI 197
                AL  A      ++  +L   + +  PH A   L TA  R  +  +  L+K G+++
Sbjct: 589 ANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNV 648

Query: 198 NATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTD 244
           ++ D    Q            +AL  A+    V +V+LL+  GA+ D
Sbjct: 649 DSEDH---QGA----------TALQVAMAEDHVDMVRLLIMNGADVD 682

Length = 823

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 36.1 bits (84), Expect = 0.002
 Identities = 14/26 (53%), Positives = 19/26 (73%)

Query: 576 DGYTPLMLAAREGHGPMCELLISNGA 601
           DG TPL LAAR G+  + +LL+ +GA
Sbjct: 1   DGNTPLHLAARNGNLELVKLLLEHGA 26

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 37.2 bits (87), Expect = 0.003
 Identities = 17/28 (60%), Positives = 21/28 (75%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQK 109
           TAL LAA +GN+ +VK LL  GAD+N K
Sbjct: 63  TALHLAARNGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 35.7 bits (83), Expect = 0.003
 Identities = 16/26 (61%), Positives = 19/26 (73%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVN 107
           T L LAA +GN+ LVK LL  GAD+N
Sbjct: 4   TPLHLAARNGNLELVKLLLEHGADIN 29

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 39.4 bits (91), Expect = 0.004
 Identities = 43/160 (26%), Positives = 65/160 (40%), Gaps = 22/160 (13%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHL-----EILEIL 131
                 L  AA  G+  +VK LL++GADVN K   G     +A   G+      E+ ++L
Sbjct: 71  LDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLL 130

Query: 132 LKAGASQ-------PACEEALLEASCHGQARLAELLM--GSDL-IRPHVAVHSLVTACCR 181
           L+AGA               L  A+ +G A + ELL+  G+D   R    V +L  A   
Sbjct: 131 LEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKN 190

Query: 182 GFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSAL 221
           G +++V  L      ++    L L         N + S  
Sbjct: 191 GRIELVKLL------LDKGLHLSLLKFNLEGVANANVSKR 224

Length = 235

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 40.0 bits (94), Expect = 0.004
 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFA-TTIAVREGHLEILEILLKAGAS 137
           T L  A ++ N   VK LL  GA+ N     G     IA+   + EI ++LL  G S
Sbjct: 194 TPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPS 250

Length = 422

>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional

 Score = 40.0 bits (93), Expect = 0.004
 Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 11/93 (11%)

Query: 520 NQNCDLFEKVMLEFALEKGNRNAGGFYALH--CAARRGDLDAVRLLTSRGYGVNVPDGDG 577
           ++N D+F   ML+ A+E     +G ++ LH  C  +  D   V  L  RGY  N  D DG
Sbjct: 19  SKNLDVFRN-MLQ-AIEP----SGNYHILHAYCGIKGLDERFVEELLHRGYSPNETDDDG 72

Query: 578 YTPLMLAAREGHGPMCELLISNGA---VCDIKN 607
             PL +A++  +  +  +L+++GA    CD ++
Sbjct: 73  NYPLHIASKINNNRIVAMLLTHGADPNACDKQH 105

Length = 446

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	748
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	100.0
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	100.0
PHA02876	682	ankyrin repeat protein; Provisional	100.0
PHA02917	661	ankyrin-like protein; Provisional	100.0
PHA02876	682	ankyrin repeat protein; Provisional	100.0
PHA02917	661	ankyrin-like protein; Provisional	100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
PHA02730	672	ankyrin-like protein; Provisional	100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
PHA02730	672	ankyrin-like protein; Provisional	100.0
KOG0510	929	consensus Ankyrin repeat protein [General function	100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
KOG0510	929	consensus Ankyrin repeat protein [General function	100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
PHA03100	480	ankyrin repeat protein; Provisional	100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
KOG0508	615	consensus Ankyrin repeat protein [General function	100.0
PHA02792	631	ankyrin-like protein; Provisional	100.0
KOG0508	615	consensus Ankyrin repeat protein [General function	100.0
PHA03100	480	ankyrin repeat protein; Provisional	100.0
PHA02878	477	ankyrin repeat protein; Provisional	100.0
PHA02878	477	ankyrin repeat protein; Provisional	100.0
PHA02989	494	ankyrin repeat protein; Provisional	100.0
PHA02791	284	ankyrin-like protein; Provisional	100.0
PHA02989	494	ankyrin repeat protein; Provisional	100.0
PHA02791	284	ankyrin-like protein; Provisional	100.0
KOG4412	226	consensus 26S proteasome regulatory complex, subun	100.0
PHA02798	489	ankyrin-like protein; Provisional	100.0
PHA02875	413	ankyrin repeat protein; Provisional	100.0
PHA02792	631	ankyrin-like protein; Provisional	100.0
PHA02798	489	ankyrin-like protein; Provisional	100.0
KOG4412	226	consensus 26S proteasome regulatory complex, subun	100.0
PHA02875	413	ankyrin repeat protein; Provisional	100.0
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.98
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.97
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.96
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.96
PHA02795	437	ankyrin-like protein; Provisional	99.96
PHA02859	209	ankyrin repeat protein; Provisional	99.96
PHA02795	437	ankyrin-like protein; Provisional	99.96
PHA02859	209	ankyrin repeat protein; Provisional	99.96
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.95
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.94
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.93
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.92
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.92
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.92
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.91
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.9
KOG0514	452	consensus Ankyrin repeat protein [General function	99.89
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.89
PHA02743	166	Viral ankyrin protein; Provisional	99.88
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.88
KOG0514	452	consensus Ankyrin repeat protein [General function	99.87
PHA02743	166	Viral ankyrin protein; Provisional	99.87
PHA02741	169	hypothetical protein; Provisional	99.86
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.85
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.84
PHA02736	154	Viral ankyrin protein; Provisional	99.84
PHA02741	169	hypothetical protein; Provisional	99.82
PHA02884	300	ankyrin repeat protein; Provisional	99.81
PHA02736	154	Viral ankyrin protein; Provisional	99.81
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.8
PHA02884	300	ankyrin repeat protein; Provisional	99.79
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.78
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.74
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.72
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.72
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.67
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.64
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.64
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.62
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.59
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.54
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.51
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.46
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.45
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.43
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.42
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.37
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.37
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.36
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.35
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.32
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.27
KOG0783	1267	consensus Uncharacterized conserved protein, conta	99.17
PF13606	30	Ank_3: Ankyrin repeat	98.89
PF13606	30	Ank_3: Ankyrin repeat	98.84
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.84
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.81
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.71
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.67
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.63
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.63
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	98.55
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	98.5
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.47
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.46
KOG0511	516	consensus Ankyrin repeat protein [General function	98.45
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.44
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	98.4
KOG0511	516	consensus Ankyrin repeat protein [General function	98.39
KOG0522	560	consensus Ankyrin repeat protein [General function	98.34
KOG0522	560	consensus Ankyrin repeat protein [General function	98.3
KOG2384	223	consensus Major histocompatibility complex protein	98.27
KOG0521	785	consensus Putative GTPase activating proteins (GAP	98.22
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	98.2
KOG2384	223	consensus Major histocompatibility complex protein	98.13
KOG0521	785	consensus Putative GTPase activating proteins (GAP	97.91
KOG0520	975	consensus Uncharacterized conserved protein, conta	97.67
KOG0520	975	consensus Uncharacterized conserved protein, conta	97.66
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	97.16
KOG2505	591	consensus Ankyrin repeat protein [General function	96.96
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	96.87
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	96.73
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	96.59
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	96.52
PLN03218	1060	maturation of RBCL 1; Provisional	96.45
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	96.32
KOG2505	591	consensus Ankyrin repeat protein [General function	96.23
PLN03218	1060	maturation of RBCL 1; Provisional	95.02
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	94.97
PLN03081	697	pentatricopeptide (PPR) repeat-containing protein;	94.46
PLN03081	697	pentatricopeptide (PPR) repeat-containing protein;	93.77
PLN03077	857	Protein ECB2; Provisional	92.82
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	92.72
PLN03077	857	Protein ECB2; Provisional	89.07

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=7.5e-62  Score=533.81  Aligned_cols=555  Identities=27%  Similarity=0.380  Sum_probs=448.8

Q ss_pred             hhHHHHHHHhcCCHHHHHHhhcCCC-CCcccc-c--ccccc----ch-hhhhhhccCCCcccchhhhcccCCchHHHHHH
Q 004504           18 VSQRLLEATLAGDLKSATECIADPY-VDVNFV-G--AVSLK----TR-KTEVVLREGKPSEVRVEFEEFKSDVTALFLAA   88 (748)
Q Consensus        18 ~~~~l~~A~~~G~~~~v~~ll~~~~-~d~n~~-~--~~~l~----~~-~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~   88 (748)
                      -...|+.|+++|+.+.+..+++... .|+... +  ..+.+    .+ ..+++++.++...     .....|.||||.|+
T Consensus        21 ~~~~l~~a~r~~~~~~~~~l~~~e~~~~~~sk~~~~pl~~aa~~~~~~v~~~ll~~~a~v~-----~~~~~~~~plh~a~   95 (1143)
T KOG4177|consen   21 RLPALHIAARNDDTNAAKLLLQNEHNADVDSKSGFTPLHIAAHYGNENVAELLLNRGAIVN-----ATARNGITPLHVAS   95 (1143)
T ss_pred             cchHHHHHHhccchhhcccccccccccchhcccccCHHHHHhhhhhhhhhhhhhccccccC-----cccccCccHHHHHH
Confidence            5568999999999999999998752 122111 0  11111    11 1566666665433     23377889999999


Q ss_pred             hcCCHHHHHHHHHcCCCCCcccccCh-hHHHHHHhCcHHHHHHHHHcCCCCccch----hH-------------------
Q 004504           89 HSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPACE----EA-------------------  144 (748)
Q Consensus        89 ~~g~~~iv~~Ll~~ga~~~~~~~~g~-~l~~A~~~g~~~iv~~Ll~~ga~~~~~~----~~-------------------  144 (748)
                      +.|+.++++.|+..|+.++..+.++. |||.|+..|+.+++.+|+.+|++.+..+    ++                   
T Consensus        96 ~~~~a~~v~~ll~~ga~~~~~~~~~lTpLh~aa~~g~~~~~~~ll~~~a~~~~k~~~g~t~l~~a~~~~~~~ll~~~~~~  175 (1143)
T KOG4177|consen   96 KRGDAEMVKLLLCRGAQIDARDRDGLTPLHCAARKGHVQVIELLLQHGAPINIKTKNGLSPLHMAAQVACARLLLEYKAP  175 (1143)
T ss_pred             hhcchhHHHHHHhccCchhhcccCCCcchhhhcccccHHHHHHHHHccCCCcccccCCCCchhhhcchhhhHHhhhcccc
Confidence            99999999999999999998888884 8899999999999999999987765421    22                   


Q ss_pred             ----HHHHHhcCcHHHHHHHhcCCC---CCCCccccHHHHHhhcCCHHHHHHHHHCCCCCccchhhhhhhcCCcccCCCC
Q 004504          145 ----LLEASCHGQARLAELLMGSDL---IRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVD  217 (748)
Q Consensus       145 ----l~~A~~~g~~~~v~~Ll~~~~---~~~~~~~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~~~~~~~~~~~~~~~  217 (748)
                          ++.|..+++.++++++.....   ..+..+.||+|.||..+.+++++.++++|++++..+             +.|
T Consensus       176 d~l~~~~~~~~~~~~~~~ll~~~~~~~~a~~~~~~tpl~~a~~~nri~~~eLll~~gadv~a~d-------------~~g  242 (1143)
T KOG4177|consen  176 DYLRLHVAAHCGHARVAKLLLDKKADPNASALNGFTPLHIACKKNRIKVVELLLKHGADVSAKD-------------ESG  242 (1143)
T ss_pred             hhhhhhHHhhcchHHHHhhhhcccCCccccccCCCCchhhhccccccceeeeeeeccCcCCccc-------------ccC
Confidence                255666677777777766544   344567888888888888888888888888888887             448


Q ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCCcccccCCccccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhcccC
Q 004504          218 CSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLS  297 (748)
Q Consensus       218 ~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~  297 (748)
                      .||||.|+..|+.+++++|+.+|+.++..                                                   
T Consensus       243 l~~lh~a~~~g~~~i~~~l~~~ga~~~~~---------------------------------------------------  271 (1143)
T KOG4177|consen  243 LTPLHVAAFMGHLDIVKLLLQHGASVNVS---------------------------------------------------  271 (1143)
T ss_pred             ccHHHHHHhccchhHHHHHHhcccccCcc---------------------------------------------------
Confidence            88888888888888888888888888765                                                   


Q ss_pred             CCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHH
Q 004504          298 YNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETAL  377 (748)
Q Consensus       298 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L  377 (748)
                         +..|.||+|.|+..+..+++++|+++|+++...   .....||+|.|.+.|..++++++++.++.++..+..|.|||
T Consensus       272 ---~vr~~tplh~AA~~~~~e~~~~ll~~ga~~~~~---~~~~kt~l~~a~~~g~~~i~~~~l~~~~~~~aar~~g~t~l  345 (1143)
T KOG4177|consen  272 ---TVRGETPLHMAARAGQVEVCKLLLQNGADVLAK---ARDDQTPLHIASRLGHEEIVHLLLQAGATPNAARTAGYTPL  345 (1143)
T ss_pred             ---cccccCcchhhhccchhhhHhhhhccCcccccc---cccccChhhhhcccchHHHHHHHhhccCCccccCcCCcccc
Confidence               456778889999888888889999888888753   47778888888888888888888888888888888888899


Q ss_pred             HHHHHcCCHHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHH
Q 004504          378 MISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIA  457 (748)
Q Consensus       378 ~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~  457 (748)
                      |+++..++.++..+|...+..-...+..+.+|++.++..    +..+.++.+++.|.+++.....|.||||.++..++..
T Consensus       346 Hlaa~~~~~~~~~~l~~~~~~~~~a~~k~~~pl~la~~~----g~~~~v~Lll~~ga~~~~~gk~gvTplh~aa~~~~~~  421 (1143)
T KOG4177|consen  346 HLAAKEGQVEVAGALLEHGAQRRQAEEKGFTPLHLAVKS----GRVSVVELLLEAGADPNSAGKNGVTPLHVAAHYGNPR  421 (1143)
T ss_pred             cHhhhhhhHHHHHHhhccccccCcccccCCcchhhhccc----CchhHHHhhhhccCCcccCCCCCcceeeehhhccCcc
Confidence            988888888888888888888888888888888888665    7788888888888888888888899999999999999


Q ss_pred             HHHHHHhcCCCCccccCCCCChHHHHHHHcC-CHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhh
Q 004504          458 ALKALIGREELNLDYQDDNGFSAVMVAASKG-HVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALE  536 (748)
Q Consensus       458 ~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~  536 (748)
                      +++.+++++ ++.+..+..|.||+|.|+..| ..++...+++.|+++|.....|.||||+|+..|+.+++..++... ..
T Consensus       422 ~v~l~l~~g-A~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~-~~  499 (1143)
T KOG4177|consen  422 VVKLLLKRG-ASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGG-AN  499 (1143)
T ss_pred             eEEEEeccC-CChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcC-Cc
Confidence            888888876 788888888899999998888 788888888889999888888999999999998888876555444 55


Q ss_pred             cCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q 004504          537 KGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSL  616 (748)
Q Consensus       537 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~  616 (748)
                      .+.....|.|++|.|...+...+++.++++|++++.++..|+||||.|+.+|+.++|++||++|||++.+++.|+||||.
T Consensus       500 ~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~  579 (1143)
T KOG4177|consen  500 DNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQ  579 (1143)
T ss_pred             cCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhH
Confidence            56666778888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHhcCCCCchhHHHHHHHHHHHHHhCCCCcccccCCCCCCCchhhhh
Q 004504          617 ARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHRKDIR  663 (748)
Q Consensus       617 A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~d~~g~t~l~~a~~~  663 (748)
                      |+..|..          +|+++|+++||++|..|.+|.||+++|...
T Consensus       580 Aa~~G~~----------~i~~LLlk~GA~vna~d~~g~TpL~iA~~l  616 (1143)
T KOG4177|consen  580 AAQQGHN----------DIAELLLKHGASVNAADLDGFTPLHIAVRL  616 (1143)
T ss_pred             HHHcChH----------HHHHHHHHcCCCCCcccccCcchhHHHHHh
Confidence            8888644          788888888888888888888888888754

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=100.00  E-value=2.7e-59  Score=513.74  Aligned_cols=503  Identities=27%  Similarity=0.387  Sum_probs=451.4

Q ss_pred             ccCCchHHHHHHhcCCHHHHHHHHHcCCCCCcccccCh-hHHHHHHhCcHHHHHHHHHcCCCCcc----chhHHHHHHhc
Q 004504           77 FKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPA----CEEALLEASCH  151 (748)
Q Consensus        77 ~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~-~l~~A~~~g~~~iv~~Ll~~ga~~~~----~~~~l~~A~~~  151 (748)
                      .+.+.||||+|+..|+.+++++|+++|+.++....+|. |||.|++.|+.++++.|+..|+.++.    +.||||.|+..
T Consensus        51 sk~~~~pl~~aa~~~~~~v~~~ll~~~a~v~~~~~~~~~plh~a~~~~~a~~v~~ll~~ga~~~~~~~~~lTpLh~aa~~  130 (1143)
T KOG4177|consen   51 SKSGFTPLHIAAHYGNENVAELLLNRGAIVNATARNGITPLHVASKRGDAEMVKLLLCRGAQIDARDRDGLTPLHCAARK  130 (1143)
T ss_pred             cccccCHHHHHhhhhhhhhhhhhhccccccCcccccCccHHHHHHhhcchhHHHHHHhccCchhhcccCCCcchhhhccc
Confidence            35889999999999999999999999999999888885 89999999999999999999998875    34899999999


Q ss_pred             CcHHHHHHHhcCCC---CCCCccccHHHHHhh-----------------------cCCHHHHHHHHHCCCCCccchhhhh
Q 004504          152 GQARLAELLMGSDL---IRPHVAVHSLVTACC-----------------------RGFVDVVDTLMKCGVDINATDRLLL  205 (748)
Q Consensus       152 g~~~~v~~Ll~~~~---~~~~~~~t~L~~A~~-----------------------~g~~~~v~~Ll~~gad~n~~~~~~~  205 (748)
                      |+.+++++|+..+.   +++..|.+|++.|+.                       .++.++++.|+...++.+..+    
T Consensus       131 g~~~~~~~ll~~~a~~~~k~~~g~t~l~~a~~~~~~~ll~~~~~~d~l~~~~~~~~~~~~~~~ll~~~~~~~~a~~----  206 (1143)
T KOG4177|consen  131 GHVQVIELLLQHGAPINIKTKNGLSPLHMAAQVACARLLLEYKAPDYLRLHVAAHCGHARVAKLLLDKKADPNASA----  206 (1143)
T ss_pred             ccHHHHHHHHHccCCCcccccCCCCchhhhcchhhhHHhhhcccchhhhhhHHhhcchHHHHhhhhcccCCccccc----
Confidence            99999999998874   456667777766655                       333444444444444444443    


Q ss_pred             hhcCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccCCccccCCCcchhhhhcccCCccccchhhHHHhhhh
Q 004504          206 QSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEIT  285 (748)
Q Consensus       206 ~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (748)
                               ..+.||+|.|+..+.++++++++.+|+++...                                       
T Consensus       207 ---------~~~~tpl~~a~~~nri~~~eLll~~gadv~a~---------------------------------------  238 (1143)
T KOG4177|consen  207 ---------LNGFTPLHIACKKNRIKVVELLLKHGADVSAK---------------------------------------  238 (1143)
T ss_pred             ---------cCCCCchhhhccccccceeeeeeeccCcCCcc---------------------------------------
Confidence                     44777777777777777777777777777654                                       


Q ss_pred             HHHHHHHhcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q 004504          286 GSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCD  365 (748)
Q Consensus       286 ~~i~~~Ll~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~  365 (748)
                                     +..|.||||.|+..|+.+++++|+.+|+.++.   .+..+.||+|.|+..+..+++++|+++|++
T Consensus       239 ---------------d~~gl~~lh~a~~~g~~~i~~~l~~~ga~~~~---~~vr~~tplh~AA~~~~~e~~~~ll~~ga~  300 (1143)
T KOG4177|consen  239 ---------------DESGLTPLHVAAFMGHLDIVKLLLQHGASVNV---STVRGETPLHMAARAGQVEVCKLLLQNGAD  300 (1143)
T ss_pred             ---------------cccCccHHHHHHhccchhHHHHHHhcccccCc---ccccccCcchhhhccchhhhHhhhhccCcc
Confidence                           66788999999999999999999999999985   568899999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCc
Q 004504          366 LNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFS  445 (748)
Q Consensus       366 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t  445 (748)
                      +...+....||+|.|...+..++++++++.++.++..+..|.+|+|+++..    +..++...+...+......+..+++
T Consensus       301 ~~~~~~~~kt~l~~a~~~g~~~i~~~~l~~~~~~~aar~~g~t~lHlaa~~----~~~~~~~~l~~~~~~~~~a~~k~~~  376 (1143)
T KOG4177|consen  301 VLAKARDDQTPLHIASRLGHEEIVHLLLQAGATPNAARTAGYTPLHLAAKE----GQVEVAGALLEHGAQRRQAEEKGFT  376 (1143)
T ss_pred             cccccccccChhhhhcccchHHHHHHHhhccCCccccCcCCcccccHhhhh----hhHHHHHHhhccccccCcccccCCc
Confidence            999999999999999999999999999999999999999999999999876    4455778888888888899999999


Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhH
Q 004504          446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDL  525 (748)
Q Consensus       446 ~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~  525 (748)
                      |+|.|+..|..+.++.++..+ .+++.....|.||||.|+..++..+++.++++|++++..+..|.||+|+|+..+....
T Consensus       377 pl~la~~~g~~~~v~Lll~~g-a~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~  455 (1143)
T KOG4177|consen  377 PLHLAVKSGRVSVVELLLEAG-ADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQ  455 (1143)
T ss_pred             chhhhcccCchhHHHhhhhcc-CCcccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhh
Confidence            999999999999999999998 6899999999999999999999999999999999999999999999999999996555


Q ss_pred             HHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCC
Q 004504          526 FEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDI  605 (748)
Q Consensus       526 ~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~  605 (748)
                      .-.++.+++.+++.....|.||||.|+..|+.++++.|++.++..+...+.|-|+||.|...+...+++.++++|++++.
T Consensus       456 ~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~  535 (1143)
T KOG4177|consen  456 IARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDL  535 (1143)
T ss_pred             hhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceeh
Confidence            56788899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCcccccCCCCCCCchhhhhh
Q 004504          606 KNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHRKDIRM  664 (748)
Q Consensus       606 ~~~~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~d~~g~t~l~~a~~~~  664 (748)
                      ++.+|.||||+|+.+++.          .++++|+++|||++.+|+.|+||||.|+...
T Consensus       536 ~~~r~~TpLh~A~~~g~v----------~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G  584 (1143)
T KOG4177|consen  536 RTGRGYTPLHVAVHYGNV----------DLVKFLLEHGADVNAKDKLGYTPLHQAAQQG  584 (1143)
T ss_pred             hcccccchHHHHHhcCCc----------hHHHHhhhCCccccccCCCCCChhhHHHHcC
Confidence            999999999999999887          6999999999999999999999999998764

>PHA02876 ankyrin repeat protein; Provisional

Probab=100.00  E-value=7.4e-56  Score=502.11  Aligned_cols=466  Identities=17%  Similarity=0.176  Sum_probs=309.7

Q ss_pred             HHHHHHHhcCCHHHHHHhhcCCCCCccccccccccchhhhhhhccCCCcccchhhhcccCCchHHHHHHhcCCHHHHHHH
Q 004504           20 QRLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEVVLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKL   99 (748)
Q Consensus        20 ~~l~~A~~~G~~~~v~~ll~~~~~d~n~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~L   99 (748)
                      ..|++|+..|+.+.+-..+.+....                  ..+++.     ......+.||||.||..||.|+|+.|
T Consensus         4 ~~l~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~-----~~~~~~~~t~LH~A~~~g~~e~V~~l   60 (682)
T PHA02876          4 DDLYRIMCRGNCIDILSAIDNYDLH------------------KHGANQ-----CENESIPFTAIHQALQLRQIDIVEEI   60 (682)
T ss_pred             HHHHHHHhcCchHHHHHHHHHHHHh------------------hhhhhh-----cccccccchHHHHHHHHHhhhHHHHH
Confidence            4689999999886655555443211                  111110     01124679999999999999999999


Q ss_pred             HHcCCC-CCcccccC-hhHHHHHHhCcHHHHHHHHHcCCCC--ccchhHHHHHHhcCcHHHHHHHhc---CCC------C
Q 004504          100 LSTGAD-VNQKLFRG-FATTIAVREGHLEILEILLKAGASQ--PACEEALLEASCHGQARLAELLMG---SDL------I  166 (748)
Q Consensus       100 l~~ga~-~~~~~~~g-~~l~~A~~~g~~~iv~~Ll~~ga~~--~~~~~~l~~A~~~g~~~~v~~Ll~---~~~------~  166 (748)
                      ++++.+ ++..+..| +|||+|+..++..-....+..+++.  +.+.+.+..+.......+++.|.+   ...      .
T Consensus        61 l~~~~~~~~~~~~~~~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~  140 (682)
T PHA02876         61 IQQNPELIYITDHKCHSTLHTICIIPNVMDIVISLTLDCDIILDIKYASIILNKHKLDEACIHILKEAISGNDIHYDKIN  140 (682)
T ss_pred             HHhCcccchhhchhhccccccccCCCCccccccccccchhhcccccHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHhhc
Confidence            999877 44566666 4999999888743222222233222  112222222222222222222221   111      1


Q ss_pred             CCCccccHHHHHhhcCCHHHHHHHHHCCCCCccchhhhhhhcCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc
Q 004504          167 RPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMK  246 (748)
Q Consensus       167 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~  246 (748)
                      ......++|+.|+..|+.+++++|++.|+++|..+.             .|.||||+|+..|+.++|++|+++|++++..
T Consensus       141 ~~~~~~~~l~~~i~~~~~~i~k~Ll~~Gadvn~~d~-------------~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~  207 (682)
T PHA02876        141 ESIEYMKLIKERIQQDELLIAEMLLEGGADVNAKDI-------------YCITPIHYAAERGNAKMVNLLLSYGADVNII  207 (682)
T ss_pred             cchhhhHHHHHHHHCCcHHHHHHHHhCCCCCCCCCC-------------CCCCHHHHHHHCCCHHHHHHHHHCCCCcCcc
Confidence            122245678999999999999999999999999884             4999999999999999999999999998864


Q ss_pred             cccCCccccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhC
Q 004504          247 VRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSC  326 (748)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~  326 (748)
                                                                            +..|.||||.|+..|+.+++++|++.
T Consensus       208 ------------------------------------------------------~~~g~t~L~~A~~~~~~~ivk~Ll~~  233 (682)
T PHA02876        208 ------------------------------------------------------ALDDLSVLECAVDSKNIDTIKAIIDN  233 (682)
T ss_pred             ------------------------------------------------------CCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence                                                                  44678999999999999999999999


Q ss_pred             CCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCH-HHHHHHHHcCCCCCccccC
Q 004504          327 GADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQE-ECVKVLAKAGADFGLVSVS  405 (748)
Q Consensus       327 g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-~~v~~Ll~~ga~~~~~~~~  405 (748)
                      +.+++       .+.++++.|+..++.+++++|++.|++++..+..|.||||+|+..++. +++++|++.|++++..+..
T Consensus       234 ~~~~~-------~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~  306 (682)
T PHA02876        234 RSNIN-------KNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIK  306 (682)
T ss_pred             CCCCC-------CCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCC
Confidence            88764       345689999999999999999999999999999999999999999986 6999999999999888888


Q ss_pred             CCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc-CCHHHHHHHHhcCCCCccccCCCCChHHHHH
Q 004504          406 GQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQA-GDIAALKALIGREELNLDYQDDNGFSAVMVA  484 (748)
Q Consensus       406 g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~-~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A  484 (748)
                      |.||||+|+..+.   ..+.++.|+..|++++..+..|.||||+|+.. ++.++++.|++.+ ++++.+|..|.||||+|
T Consensus       307 g~TpLh~Aa~~g~---~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~g-adin~~d~~G~TpLh~A  382 (682)
T PHA02876        307 GETPLYLMAKNGY---DTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELG-ANVNARDYCDKTPIHYA  382 (682)
T ss_pred             CCCHHHHHHHhCC---CHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcC-CCCccCCCCCCCHHHHH
Confidence            8776666654321   23445555555555555555555555555543 2444444444443 45555555555555555


Q ss_pred             HHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCC-HHHHHHH
Q 004504          485 ASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGD-LDAVRLL  563 (748)
Q Consensus       485 ~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~L  563 (748)
                      +..|+.+++++|+++|++++..+..|.                                  ||||+|+..++ ..++++|
T Consensus       383 a~~~~~~iv~~Ll~~gad~~~~~~~g~----------------------------------T~Lh~A~~~~~~~~~vk~L  428 (682)
T PHA02876        383 AVRNNVVIINTLLDYGADIEALSQKIG----------------------------------TALHFALCGTNPYMSVKTL  428 (682)
T ss_pred             HHcCCHHHHHHHHHCCCCccccCCCCC----------------------------------chHHHHHHcCCHHHHHHHH
Confidence            555555555555555555555555444                                  55555544332 3445555


Q ss_pred             HhCCCCCCCCCCCCCcHHHHHHHcC-CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhc
Q 004504          564 TSRGYGVNVPDGDGYTPLMLAAREG-HGPMCELLISNGAVCDIKNARGETALSLARKN  620 (748)
Q Consensus       564 l~~g~d~n~~d~~g~tpL~~A~~~~-~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~  620 (748)
                      +++|+++|.+|..|+||||+|+..+ +.+++++|+++|+|+|.+|..|.|||++|+.+
T Consensus       429 l~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~tpl~~a~~~  486 (682)
T PHA02876        429 IDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIALEY  486 (682)
T ss_pred             HhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHh
Confidence            5555555555555555555555544 45555555555555555555555555555543

>PHA02917 ankyrin-like protein; Provisional

Probab=100.00  E-value=4.2e-54  Score=471.87  Aligned_cols=317  Identities=15%  Similarity=0.099  Sum_probs=201.2

Q ss_pred             CCchHHHHHH--HcCCHHHHHHHHhCCCCCCCCccCCCCC-----------CcHHHHHHH-----------cCCHHHHHH
Q 004504          303 YGRTLLHHAI--LCGCTGAVAVLLSCGADAQCPIRTQKTE-----------FHPIHLAAR-----------LGYSTIVQS  358 (748)
Q Consensus       303 ~g~t~L~~A~--~~g~~~~v~~Ll~~g~~~~~~~~~~~~~-----------~t~L~~A~~-----------~g~~~iv~~  358 (748)
                      .|+||||.|+  ..|+.+++++|+++|++++..+..+..|           .||||+|+.           .++.+++++
T Consensus       135 ~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~  214 (661)
T PHA02917        135 NHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKC  214 (661)
T ss_pred             CCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHH
Confidence            4455555322  2445555555555555554322111222           356666553           335566666


Q ss_pred             HHHcCCCCCCCCCCCCcHHHHHHHcCCH--HHHHHHHHcCCCCC----ccccCCCChhhhhhccc-----cccchHHHHH
Q 004504          359 LIDSGCDLNTKTESGETALMISAKYKQE--ECVKVLAKAGADFG----LVSVSGQSASSIAGSNW-----WSVGFQRAVL  427 (748)
Q Consensus       359 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~ga~~~----~~~~~g~t~l~~a~~~~-----~~~~~~~~~~  427 (748)
                      |+++|+++|.+|.+|.||||+|+.+|+.  +++++|++ |++++    ..+..+.+++++++.-.     ......++++
T Consensus       215 Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~  293 (661)
T PHA02917        215 LINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVK  293 (661)
T ss_pred             HHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccCcccccchHHHHHHHhhccccccchHHHHH
Confidence            6666666666666666666666655553  46666543 55443    23334455555544210     0122455566


Q ss_pred             HHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCChHHH---HHHHcCC--HHHHHHHHHCCCC
Q 004504          428 DIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVM---VAASKGH--VEVFRELVYAGAD  502 (748)
Q Consensus       428 ~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~---~A~~~~~--~~~v~~Ll~~gad  502 (748)
                      .|++.|++      .+.++++++...++.+++++++...+         +.+++|   .++..|.  .+++++|+++||+
T Consensus       294 ~Li~~Ga~------~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~~~~~g~~~~~~v~~Ll~~GAd  358 (661)
T PHA02917        294 LFLENGKP------HGIMCSIVPLWRNDKETISLILKTMN---------SDVLQHILIEYMTFGDIDIPLVECMLEYGAV  358 (661)
T ss_pred             HHHhCCCC------CceeEeeecccccchHHHHHHHHHhc---------hHHHHHHHHHHHHcCCCcHHHHHHHHHcCCC
Confidence            66666653      23446666777777777777764321         222333   3334554  4477777777777


Q ss_pred             CccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcC-----------------------CHHH
Q 004504          503 VKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRG-----------------------DLDA  559 (748)
Q Consensus       503 ~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~-----------------------~~~~  559 (748)
                      ++.++..|.++.    ...+.++++.||.+.+.+.+..+.+|+||||.|++.+                       ..++
T Consensus       359 vn~~~~~g~~~~----~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  434 (661)
T PHA02917        359 VNKEAIHGYFRN----INIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGLCDMSYACPILST  434 (661)
T ss_pred             CCCCCccccchh----hcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhccchhhhhhhhHHH
Confidence            777777776643    3456667777776655555555556777777766432                       4678


Q ss_pred             HHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCCCchhHHHHHHHHHHHH
Q 004504          560 VRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARML  639 (748)
Q Consensus       560 v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~L  639 (748)
                      +++|+++|+|+|.+|..|+||||+|+..++.+++++|+++|+|+|.+|..|+||||+|+...+..         +++++|
T Consensus       435 v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~~---------~iv~~L  505 (661)
T PHA02917        435 INICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNI---------ELLKML  505 (661)
T ss_pred             HHHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCCH---------HHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999632222         799999


Q ss_pred             HhCCCCccc
Q 004504          640 VLGGGHVLK  648 (748)
Q Consensus       640 l~~ga~~~~  648 (748)
                      +.+|++++.
T Consensus       506 L~~ga~i~~  514 (661)
T PHA02917        506 LCHKPTLDC  514 (661)
T ss_pred             HHcCCChhH
Confidence            999998864

>PHA02876 ankyrin repeat protein; Provisional

Probab=100.00  E-value=7.6e-54  Score=485.68  Aligned_cols=337  Identities=21%  Similarity=0.182  Sum_probs=273.4

Q ss_pred             chHHHHHHHcCCHHHHHHHHhCCCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC
Q 004504          305 RTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYK  384 (748)
Q Consensus       305 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~  384 (748)
                      .++++.|+..|+.+++++|+++|++++.   .+..|.||||+|+..|+.++|++|+++|++++..+..|.||||+|+..+
T Consensus       146 ~~~l~~~i~~~~~~i~k~Ll~~Gadvn~---~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~  222 (682)
T PHA02876        146 MKLIKERIQQDELLIAEMLLEGGADVNA---KDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSK  222 (682)
T ss_pred             hHHHHHHHHCCcHHHHHHHHhCCCCCCC---CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcC
Confidence            3566666666667777777776666663   3456666777777777777777777777666666666667777777666


Q ss_pred             CHHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCH-HHHHHHH
Q 004504          385 QEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDI-AALKALI  463 (748)
Q Consensus       385 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~-~~v~~Ll  463 (748)
                      +.+++++|++.+.+++.    +.++++.|+..    +..+.+..+++.|.+++..+..|.||||+|+..++. +++++|+
T Consensus       223 ~~~ivk~Ll~~~~~~~~----~~~~L~~ai~~----~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl  294 (682)
T PHA02876        223 NIDTIKAIIDNRSNINK----NDLSLLKAIRN----EDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLL  294 (682)
T ss_pred             CHHHHHHHHhcCCCCCC----CcHHHHHHHHc----CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHH
Confidence            67777776666655532    23455555443    455666666666666677777778899999999886 5888888


Q ss_pred             hcCCCCccccCCCCChHHHHHHHcC-CHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCC
Q 004504          464 GREELNLDYQDDNGFSAVMVAASKG-HVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNA  542 (748)
Q Consensus       464 ~~~~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~  542 (748)
                      +.+ ++++.+|.+|.||||+|+..| ..+++++|+..|++++..+..|.||||+|+..+....+..++...+.+++.+|.
T Consensus       295 ~~g-adin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~  373 (682)
T PHA02876        295 ERG-ADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDY  373 (682)
T ss_pred             HCC-CCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCC
Confidence            876 799999999999999999999 599999999999999999999999999999976655555666788899999999


Q ss_pred             CCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcC
Q 004504          543 GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGH-GPMCELLISNGAVCDIKNARGETALSLARKNS  621 (748)
Q Consensus       543 ~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~-~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~  621 (748)
                      .|+||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++ ..++++|+++|+++|.+|..|+||||+|+..+
T Consensus       374 ~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~  453 (682)
T PHA02876        374 CDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKN  453 (682)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhC
Confidence            99999999999999999999999999999999999999999998665 56899999999999999999999999999875


Q ss_pred             CCCchhHHHHHHHHHHHHHhCCCCcccccCCCCCCCchhhh
Q 004504          622 SMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHRKDI  662 (748)
Q Consensus       622 ~~~~~~~~~~~~~~~~~Ll~~ga~~~~~d~~g~t~l~~a~~  662 (748)
                      ...         +++++|+++|++++.+|..|.||+++|..
T Consensus       454 ~~~---------~iv~lLl~~Gad~n~~d~~g~tpl~~a~~  485 (682)
T PHA02876        454 CKL---------DVIEMLLDNGADVNAINIQNQYPLLIALE  485 (682)
T ss_pred             CcH---------HHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence            332         79999999999999999999999999875

>PHA02917 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.9e-50  Score=443.00  Aligned_cols=422  Identities=18%  Similarity=0.175  Sum_probs=330.2

Q ss_pred             cCCchHHHHHHhc---CCHHHHHHHHHcCCCCCcccccCh-hHHHHHHhCcHH----HHHHHHHcCCCCccchhHHHHHH
Q 004504           78 KSDVTALFLAAHS---GNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLE----ILEILLKAGASQPACEEALLEAS  149 (748)
Q Consensus        78 ~~g~t~L~~A~~~---g~~~iv~~Ll~~ga~~~~~~~~g~-~l~~A~~~g~~~----iv~~Ll~~ga~~~~~~~~l~~A~  149 (748)
                      ..|.||||+||..   |+.++|++|+++|++++.++..|. |||+|+..|+.+    ++++|++.+...+.         
T Consensus        30 ~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~n~---------  100 (661)
T PHA02917         30 QFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYSNI---------  100 (661)
T ss_pred             CCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCCCC---------
Confidence            6889999997665   889999999999999998888775 999999999955    55778776433322         


Q ss_pred             hcCcHHHHHHHhcCCCCCCCccccHHHHHhhcCCHHHHHHHHHCCCCCccchhhhhhhcCCcccCCCCCCHHHHHH--Hc
Q 004504          150 CHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAV--VS  227 (748)
Q Consensus       150 ~~g~~~~v~~Ll~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~~~~~~~~~~~~~~~~t~L~~A~--~~  227 (748)
                                       .  ...++++.|+.+|+.++|++|+++|+|+|..+.             .|.|||+.|+  ..
T Consensus       101 -----------------~--~~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~-------------~g~T~L~~~~a~~~  148 (661)
T PHA02917        101 -----------------N--DFNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCE-------------NHRSVIENYVMTDD  148 (661)
T ss_pred             -----------------C--CcchHHHHHhhcCCHHHHHHHHHcCCCCCccCC-------------CCccHHHHHHHccC
Confidence                             0  123567889999999999999999999999884             4999999654  57


Q ss_pred             CCHHHHHHHHHcCCCCCcccccCCccccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhcccCCCCCCCCchH
Q 004504          228 RQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTL  307 (748)
Q Consensus       228 g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~  307 (748)
                      |+.++|++|+++|++++..+..+...+....                                        -....+.||
T Consensus       149 ~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~----------------------------------------~~~~~~~t~  188 (661)
T PHA02917        149 PVPEIIDLFIENGCSVLYEDEDDEYGYAYDD----------------------------------------YQPRNCGTV  188 (661)
T ss_pred             CCHHHHHHHHHcCCCcccccccccccccccc----------------------------------------ccccccccH
Confidence            8999999999999999865432211110000                                        023356799


Q ss_pred             HHHHHH-----------cCCHHHHHHHHhCCCCCCCCccCCCCCCcHHHHHHHcCCH--HHHHHHHHcCCCCC----CCC
Q 004504          308 LHHAIL-----------CGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYS--TIVQSLIDSGCDLN----TKT  370 (748)
Q Consensus       308 L~~A~~-----------~g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~--~iv~~Ll~~g~~~~----~~~  370 (748)
                      ||+|+.           .++.++|++|+++|++++.   .+..|.||||+|+..|+.  ++|++|++ |++++    ..|
T Consensus       189 L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~---~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~  264 (661)
T PHA02917        189 LHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSS---IDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDD  264 (661)
T ss_pred             HHHHHhhcccccccccccCcHHHHHHHHHCCCCccc---CCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccC
Confidence            999986           5689999999999999985   568999999999999985  89999985 88775    356


Q ss_pred             CCCCcHHHHHHH-------cC--CHHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHH-cCCCCCCCC
Q 004504          371 ESGETALMISAK-------YK--QEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIR-SGNIPKSSN  440 (748)
Q Consensus       371 ~~g~t~L~~A~~-------~~--~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~-~~~~~~~~~  440 (748)
                      ..|.+|+++|+.       +.  +.+++++|++.|++      .+.++++++...    +..+++.+++. .+.+.    
T Consensus       265 ~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~----  330 (661)
T PHA02917        265 LTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKP------HGIMCSIVPLWR----NDKETISLILKTMNSDV----  330 (661)
T ss_pred             cccccchHHHHHHHhhccccccchHHHHHHHHhCCCC------CceeEeeecccc----cchHHHHHHHHHhchHH----
Confidence            678899999984       11  77999999999986      244555555433    55666666663 23222    


Q ss_pred             CCCCcHHHHHHHcCC--HHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHH-CCCCCccCCCCCCcHHHHH
Q 004504          441 VAVFSPLMFVAQAGD--IAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVY-AGADVKLLNKSGKTAIMLS  517 (748)
Q Consensus       441 ~~g~t~L~~a~~~~~--~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~gad~~~~~~~g~t~L~~A  517 (748)
                        -.+++..++..|.  .+++++|++.| ++++.++..|.++.    ...+.+++++|+. .|++++..+..|.||||.|
T Consensus       331 --~~~~l~~~~~~g~~~~~~v~~Ll~~G-Advn~~~~~g~~~~----~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a  403 (661)
T PHA02917        331 --LQHILIEYMTFGDIDIPLVECMLEYG-AVVNKEAIHGYFRN----INIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHL  403 (661)
T ss_pred             --HHHHHHHHHHcCCCcHHHHHHHHHcC-CCCCCCCccccchh----hcCCHHHHHHHHHhcCCCccccCCCCCChhHHH
Confidence              0123344445665  56999999997 79999999998854    3667888888887 6888877777899999998


Q ss_pred             HHcCC-----------------------hhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCC
Q 004504          518 ELNQN-----------------------CDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPD  574 (748)
Q Consensus       518 ~~~~~-----------------------~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d  574 (748)
                      +..+.                       .+++ .++...+.+++.+|..|+||||+|+..++.+++++|+++|+|+|.+|
T Consensus       404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d  482 (661)
T PHA02917        404 CKSNYGCYNFYTYTYKKGLCDMSYACPILSTI-NICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRS  482 (661)
T ss_pred             HHhcccchhhhhhhhhhccchhhhhhhhHHHH-HHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCC
Confidence            75432                       3344 44555778899999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHH-cCCHHHHHHHHhCCCCCCCC
Q 004504          575 GDGYTPLMLAAR-EGHGPMCELLISNGAVCDIK  606 (748)
Q Consensus       575 ~~g~tpL~~A~~-~~~~~~v~~Ll~~gad~~~~  606 (748)
                      ..|+||||+|+. .++.+++++|+++|++++..
T Consensus       483 ~~G~T~L~~A~~~~~~~~iv~~LL~~ga~i~~i  515 (661)
T PHA02917        483 NNGYTCIAIAINESRNIELLKMLLCHKPTLDCV  515 (661)
T ss_pred             CCCCCHHHHHHHhCCCHHHHHHHHHcCCChhHH
Confidence            999999999996 68999999999999998743

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=3.9e-49  Score=417.95  Aligned_cols=356  Identities=15%  Similarity=0.151  Sum_probs=277.9

Q ss_pred             HHHHhcCcHHHHHHHhcCCCCCCCccccHHHHHh--hcCCHHHHHHHHHCCCCCccchhhhhhhcCCcccCCCCCCHHHH
Q 004504          146 LEASCHGQARLAELLMGSDLIRPHVAVHSLVTAC--CRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVA  223 (748)
Q Consensus       146 ~~A~~~g~~~~v~~Ll~~~~~~~~~~~t~L~~A~--~~g~~~~v~~Ll~~gad~n~~~~~~~~~~~~~~~~~~~~t~L~~  223 (748)
                      ..+...++.+.++.+++..  .+..+.++||.++  ..++.++|++|+++|+++|..+             ..|.||||+
T Consensus        14 ~~~~~~~n~~~~~~~l~~~--~~~g~~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d-------------~~G~TpLh~   78 (446)
T PHA02946         14 YAKYNSKNLDVFRNMLQAI--EPSGNYHILHAYCGIKGLDERFVEELLHRGYSPNETD-------------DDGNYPLHI   78 (446)
T ss_pred             HHHHccCcHHHHHHHHhcc--CCCCCChHHHHHHHhcCCCHHHHHHHHHCcCCCCccC-------------CCCCCHHHH
Confidence            4555556666666666432  1222367788765  3456789999999999999888             448999999


Q ss_pred             HHHcCCHHHHHHHHHcCCCCCcccccCCccccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhcccCCCCCCC
Q 004504          224 AVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHY  303 (748)
Q Consensus       224 A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~  303 (748)
                      |+..|+.++|++|+++|++++..                                                      +..
T Consensus        79 Aa~~g~~eiv~lLL~~GAdin~~------------------------------------------------------d~~  104 (446)
T PHA02946         79 ASKINNNRIVAMLLTHGADPNAC------------------------------------------------------DKQ  104 (446)
T ss_pred             HHHcCCHHHHHHHHHCcCCCCCC------------------------------------------------------CCC
Confidence            99999999999999999998864                                                      557


Q ss_pred             CchHHHHHHHcC--CHHHHHHHHhCCCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 004504          304 GRTLLHHAILCG--CTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISA  381 (748)
Q Consensus       304 g~t~L~~A~~~g--~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~  381 (748)
                      |.||||+|+..+  ..+++++|+++|++++.  ..+..|.|||| |+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus       105 g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~--~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~  181 (446)
T PHA02946        105 HKTPLYYLSGTDDEVIERINLLVQYGAKINN--SVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHL  181 (446)
T ss_pred             CCCHHHHHHHcCCchHHHHHHHHHcCCCccc--ccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHH
Confidence            889999988766  47889999999998874  23578889997 66678899999999999999999999999999888


Q ss_pred             HcCC--HHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--CHH
Q 004504          382 KYKQ--EECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAG--DIA  457 (748)
Q Consensus       382 ~~~~--~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~--~~~  457 (748)
                      ..++  .+++++|+++|++++.+|..|.|                                     |||+|+..+  +.+
T Consensus       182 ~~~~~~~~~v~~Ll~~Gadin~~d~~G~T-------------------------------------pLH~Aa~~~~~~~~  224 (446)
T PHA02946        182 MSDNPKASTISWMMKLGISPSKPDHDGNT-------------------------------------PLHIVCSKTVKNVD  224 (446)
T ss_pred             HhcCCCHHHHHHHHHcCCCCcccCCCCCC-------------------------------------HHHHHHHcCCCcHH
Confidence            7554  58888998888888877766655                                     677777665  778


Q ss_pred             HHHHHHhcCCCCccccCCCCChHHHHHHHcCC-HHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhh
Q 004504          458 ALKALIGREELNLDYQDDNGFSAVMVAASKGH-VEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALE  536 (748)
Q Consensus       458 ~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~  536 (748)
                      ++++|+. + ++++.+|..|.||||+|+..++ .+++++|+++|++++     ++| ++.|+..+..++++.+..+..  
T Consensus       225 iv~lLl~-g-adin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~-----~~~-~~~a~~~~~~~~~e~l~~~g~--  294 (446)
T PHA02946        225 IINLLLP-S-TDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVIT-----DQT-VNICIFYDRDDVLEIINDKGK--  294 (446)
T ss_pred             HHHHHHc-C-CCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCC-----CcH-HHHHHHcCchHHHHHHHHcCc--
Confidence            8888874 3 7888888888999998888877 478888888887654     233 788888887777766654321  


Q ss_pred             cCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q 004504          537 KGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSL  616 (748)
Q Consensus       537 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~  616 (748)
                           ..|.||||+|+..|+.+++++|+++|+       .|+||||+|+.+++.+++++|+++|+++|.+ ..|.||||+
T Consensus       295 -----~~~~TpLh~Aa~~g~~eivk~Ll~~~~-------~~~t~L~~A~~~~~~~~v~~Ll~~ga~~n~~-~~G~t~l~~  361 (446)
T PHA02946        295 -----QYDSTDFKMAVEVGSIRCVKYLLDNDI-------ICEDAMYYAVLSEYETMVDYLLFNHFSVDSV-VNGHTCMSE  361 (446)
T ss_pred             -----ccCCCHHHHHHHcCCHHHHHHHHHCCC-------ccccHHHHHHHhCHHHHHHHHHHCCCCCCCc-cccccHHHH
Confidence                 356789999999999999999998764       4688999999999999999999999999885 579999999


Q ss_pred             HHhcCCCCchhHHHHHHHHHHHHHhCC
Q 004504          617 ARKNSSMKNDAELVILDEVARMLVLGG  643 (748)
Q Consensus       617 A~~~~~~~~~~~~~~~~~~~~~Ll~~g  643 (748)
                      |+..++.          ++++.|+.+.
T Consensus       362 a~~~~~~----------~~~~~ll~~~  378 (446)
T PHA02946        362 CVRLNNP----------VILSKLMLHN  378 (446)
T ss_pred             HHHcCCH----------HHHHHHHhcC
Confidence            9988543          6777777743

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=8.1e-49  Score=415.50  Aligned_cols=331  Identities=16%  Similarity=0.193  Sum_probs=221.6

Q ss_pred             chHHHHHHh--cCCHHHHHHHHHcCCCCCcccccCh-hHHHHHHhCcHHHHHHHHHcCCCCccchhHHHHHHhcCcHHHH
Q 004504           81 VTALFLAAH--SGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLA  157 (748)
Q Consensus        81 ~t~L~~A~~--~g~~~iv~~Ll~~ga~~~~~~~~g~-~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~l~~A~~~g~~~~v  157 (748)
                      .++||.++.  .++.++|++|+++|+++|.++..|. |||+|+..|+.+++++|+++|++++.                 
T Consensus        38 ~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~-----------------  100 (446)
T PHA02946         38 YHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNA-----------------  100 (446)
T ss_pred             ChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCC-----------------
Confidence            566665553  3456677777777777776666664 66777777777777777777766654                 


Q ss_pred             HHHhcCCCCCCCccccHHHHHhhcC--CHHHHHHHHHCCCCCccc-hhhhhhhcCCcccCCCCCCHHHHHHHcCCHHHHH
Q 004504          158 ELLMGSDLIRPHVAVHSLVTACCRG--FVDVVDTLMKCGVDINAT-DRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQ  234 (748)
Q Consensus       158 ~~Ll~~~~~~~~~~~t~L~~A~~~g--~~~~v~~Ll~~gad~n~~-~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~  234 (748)
                               .+..|.||||+|+..+  ..+++++|+++|+++|.. +             ..|.|||+ |+..++.++++
T Consensus       101 ---------~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d-------------~~g~tpL~-aa~~~~~~vv~  157 (446)
T PHA02946        101 ---------CDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVD-------------EEGCGPLL-ACTDPSERVFK  157 (446)
T ss_pred             ---------CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccC-------------CCCCcHHH-HHHCCChHHHH
Confidence                     4455667777666544  356667777777766642 3             23666665 44556666777


Q ss_pred             HHHHcCCCCCcccccCCccccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhcccCCCCCCCCchHHHHHHHc
Q 004504          235 LLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILC  314 (748)
Q Consensus       235 ~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~L~~A~~~  314 (748)
                      +|++.|++++..                                                      +..|+||||.|+..
T Consensus       158 ~Ll~~gad~~~~------------------------------------------------------d~~G~t~Lh~A~~~  183 (446)
T PHA02946        158 KIMSIGFEARIV------------------------------------------------------DKFGKNHIHRHLMS  183 (446)
T ss_pred             HHHhcccccccc------------------------------------------------------CCCCCCHHHHHHHh
Confidence            777766666543                                                      34566667666654


Q ss_pred             CC--HHHHHHHHhCCCCCCCCccCCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC-HHHH
Q 004504          315 GC--TGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLG--YSTIVQSLIDSGCDLNTKTESGETALMISAKYKQ-EECV  389 (748)
Q Consensus       315 g~--~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g--~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~~v  389 (748)
                      ++  .+++++|+++|++++.   .+..|.||||+|+..|  +.+++++|++ |+++|.+|..|.||||+|+..++ .+++
T Consensus       184 ~~~~~~~v~~Ll~~Gadin~---~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~  259 (446)
T PHA02946        184 DNPKASTISWMMKLGISPSK---PDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLI  259 (446)
T ss_pred             cCCCHHHHHHHHHcCCCCcc---cCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHH
Confidence            33  4666666666666653   3456666666666654  5666666663 66666666666666666666665 3666


Q ss_pred             HHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCC
Q 004504          390 KVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELN  469 (748)
Q Consensus       390 ~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~  469 (748)
                      ++|+++|++.+.                                          . +++.|+..+..++++.+..++.  
T Consensus       260 ~~Ll~~g~~~~~------------------------------------------~-~~~~a~~~~~~~~~e~l~~~g~--  294 (446)
T PHA02946        260 NKLLSTSNVITD------------------------------------------Q-TVNICIFYDRDDVLEIINDKGK--  294 (446)
T ss_pred             HHHHhCCCCCCC------------------------------------------c-HHHHHHHcCchHHHHHHHHcCc--
Confidence            666666654321                                          0 3555666666666666665541  


Q ss_pred             ccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHH
Q 004504          470 LDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALH  549 (748)
Q Consensus       470 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~  549 (748)
                           ..|.||||+|+..|+.+++++|+++|+                                         .|+||||
T Consensus       295 -----~~~~TpLh~Aa~~g~~eivk~Ll~~~~-----------------------------------------~~~t~L~  328 (446)
T PHA02946        295 -----QYDSTDFKMAVEVGSIRCVKYLLDNDI-----------------------------------------ICEDAMY  328 (446)
T ss_pred             -----ccCCCHHHHHHHcCCHHHHHHHHHCCC-----------------------------------------ccccHHH
Confidence                 235566666666666666666666543                                         3458999


Q ss_pred             HHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q 004504          550 CAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGA  601 (748)
Q Consensus       550 ~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga  601 (748)
                      +|+..++.+++++|+.+|+++|.. ..|.||||+|++.++.++++.|+++..
T Consensus       329 ~A~~~~~~~~v~~Ll~~ga~~n~~-~~G~t~l~~a~~~~~~~~~~~ll~~~~  379 (446)
T PHA02946        329 YAVLSEYETMVDYLLFNHFSVDSV-VNGHTCMSECVRLNNPVILSKLMLHNP  379 (446)
T ss_pred             HHHHhCHHHHHHHHHHCCCCCCCc-cccccHHHHHHHcCCHHHHHHHHhcCc
Confidence            999999999999999999999986 689999999999999999999999644

>PHA02730 ankyrin-like protein; Provisional

Probab=100.00  E-value=8.1e-49  Score=416.27  Aligned_cols=444  Identities=13%  Similarity=0.109  Sum_probs=302.4

Q ss_pred             HHHHHHHHHcCCCCC-cccccC-hhHHHHHHhC---cHHHHHHHHHcCCCCccchhHHHHHHhcCcHHHHHHHhcCCCCC
Q 004504           93 VTLVKKLLSTGADVN-QKLFRG-FATTIAVREG---HLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIR  167 (748)
Q Consensus        93 ~~iv~~Ll~~ga~~~-~~~~~g-~~l~~A~~~g---~~~iv~~Ll~~ga~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~  167 (748)
                      ...+++.++.-+++| .+|..| +|||+|+.+|   +.++|++|+++||+++.                          .
T Consensus        20 ~~~~~~~~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~--------------------------k   73 (672)
T PHA02730         20 YKKIKLEIETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLC--------------------------R   73 (672)
T ss_pred             HHHHHHHHHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcc--------------------------c
Confidence            355677777766777 666666 4888888886   48888888888888875                          5


Q ss_pred             CCccccHHHHHhhcC--CHHHHHHHHHCCCCC--ccchhhhhhhcCCcccCCCCCCHHHHHHH--cCCHHHHHHHHH-cC
Q 004504          168 PHVAVHSLVTACCRG--FVDVVDTLMKCGVDI--NATDRLLLQSLKPSLHTNVDCSALVAAVV--SRQVSVVQLLLQ-AG  240 (748)
Q Consensus       168 ~~~~~t~L~~A~~~g--~~~~v~~Ll~~gad~--n~~~~~~~~~~~~~~~~~~~~t~L~~A~~--~g~~~iv~~Ll~-~g  240 (748)
                      +..|.||||+|+..+  +.++|++|+++|+++  +..+             +.+.+||+.++.  +++.++|++|++ .|
T Consensus        74 D~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~-------------~~~d~~l~~y~~s~n~~~~~vk~Li~~~~  140 (672)
T PHA02730         74 NNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTS-------------NINDFDLYSYMSSDNIDLRLLKYLIVDKR  140 (672)
T ss_pred             CCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCccccc-------------ccCCchHHHHHHhcCCcHHHHHHHHHhcC
Confidence            677889999888866  789999999986544  6555             458899999988  889999999997 67


Q ss_pred             CCCCcccccCCccccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhcccCCCCCCCCchHHHHHHHcCCHHHH
Q 004504          241 ANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAV  320 (748)
Q Consensus       241 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~L~~A~~~g~~~~v  320 (748)
                      ++++.....                                                 .....|.+|++.|...++.++|
T Consensus       141 ~~~~~~~~~-------------------------------------------------~~~~~~~~~~yl~~~~~~~eIv  171 (672)
T PHA02730        141 IRPSKNTNY-------------------------------------------------YIHCLGLVDIYVTTPNPRPEVL  171 (672)
T ss_pred             CChhhhhhh-------------------------------------------------hccccchhhhhHhcCCCchHHH
Confidence            888754110                                                 0012678999999999999999


Q ss_pred             HHHHhCCCCCCCC----ccCCCCCC-cHHHHH------HHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH--HHHcCCHH
Q 004504          321 AVLLSCGADAQCP----IRTQKTEF-HPIHLA------ARLGYSTIVQSLIDSGCDLNTKTESGETALMI--SAKYKQEE  387 (748)
Q Consensus       321 ~~Ll~~g~~~~~~----~~~~~~~~-t~L~~A------~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~--A~~~~~~~  387 (748)
                      ++|+++|++++--    ...+.... |.||+.      ...++.|++++|+++|+++|.+|..|.||||+  |...++.|
T Consensus       172 klLi~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~e  251 (672)
T PHA02730        172 LWLLKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIE  251 (672)
T ss_pred             HHHHHcCCcccccccccccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHH
Confidence            9999999998511    11223344 444433      45678999999999999999999999999995  55567799


Q ss_pred             HHHHHHHcCCCCCccccCC----CChhhhhhccccc----cchHHHHHHHHHcCCCC-------CCCCCCCCcHHHHHHH
Q 004504          388 CVKVLAKAGADFGLVSVSG----QSASSIAGSNWWS----VGFQRAVLDIIRSGNIP-------KSSNVAVFSPLMFVAQ  452 (748)
Q Consensus       388 ~v~~Ll~~ga~~~~~~~~g----~t~l~~a~~~~~~----~~~~~~~~~l~~~~~~~-------~~~~~~g~t~L~~a~~  452 (748)
                      ++++|++.-.+....+...    +..++-.....++    .-...++..|++.+...       ...+..|++       
T Consensus       252 iv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n-------  324 (672)
T PHA02730        252 IVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYN-------  324 (672)
T ss_pred             HHHHHHhccccccccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccc-------
Confidence            9999998433322221111    0111111110000    11234555666544321       112222221       


Q ss_pred             cCCHHHHHHHHhcCCCCccccCCC-CChHHHHHHHcC---CHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCC----hh
Q 004504          453 AGDIAALKALIGREELNLDYQDDN-GFSAVMVAASKG---HVEVFRELVYAGADVKLLNKSGKTAIMLSELNQN----CD  524 (748)
Q Consensus       453 ~~~~~~v~~Ll~~~~~~~~~~~~~-g~t~L~~A~~~~---~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~----~~  524 (748)
                         .+++..++++..    .++++ -+-.|+.=...+   +.+++++|+++||++|.. ..|.||||+|+..++    .+
T Consensus       325 ---~~~~~~i~~~~~----~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~e  396 (672)
T PHA02730        325 ---HYIIDNILKRFR----QQDESIVQAMLINYLHYGDMVSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVN  396 (672)
T ss_pred             ---hhHHHHHHHhhh----ccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHH
Confidence               122222222210    00000 011333333333   467777777777777764 677777777766654    67


Q ss_pred             HHHHHHHHHh-hhcCCCCCCCchHHHH---HHhcC---------CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH
Q 004504          525 LFEKVMLEFA-LEKGNRNAGGFYALHC---AARRG---------DLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGP  591 (748)
Q Consensus       525 ~~~~ll~~~~-~~~~~~~~~g~t~L~~---A~~~~---------~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~  591 (748)
                      +++.|+..++ .+++..|..|.||||.   |...+         ..+++++|+++|+|+|.+|..|+||||+|+..++.+
T Consensus       397 IvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~e  476 (672)
T PHA02730        397 VVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQ  476 (672)
T ss_pred             HHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHH
Confidence            7777776654 3566677777777773   32221         246799999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCCC-CCCcHHHHHHhcC-CCCchhHHHHHHHHHHHHHhCCCCccc
Q 004504          592 MCELLISNGAVCDIKNA-RGETALSLARKNS-SMKNDAELVILDEVARMLVLGGGHVLK  648 (748)
Q Consensus       592 ~v~~Ll~~gad~~~~~~-~g~t~L~~A~~~~-~~~~~~~~~~~~~~~~~Ll~~ga~~~~  648 (748)
                      ++++|+++||++|.+|. .|.||||+|+... +.         .+++++|+++|+++..
T Consensus       477 ive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~---------~eIv~~LLs~ga~i~~  526 (672)
T PHA02730        477 FARRLLEYGASVNTTSRSIINTAIQKSSYRRENK---------TKLVDLLLSYHPTLET  526 (672)
T ss_pred             HHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCc---------HHHHHHHHHcCCCHHH
Confidence            99999999999999997 5999999998742 22         1799999999998753

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=1.9e-47  Score=414.39  Aligned_cols=407  Identities=16%  Similarity=0.142  Sum_probs=284.9

Q ss_pred             hcCCHHHHHHHHHcC-CCCCcc-cccCh-hHHHHHH--hCcHHHHHHHHHcCCCCccchhHHHHHHhcCcHHHHHHHhcC
Q 004504           89 HSGNVTLVKKLLSTG-ADVNQK-LFRGF-ATTIAVR--EGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGS  163 (748)
Q Consensus        89 ~~g~~~iv~~Ll~~g-a~~~~~-~~~g~-~l~~A~~--~g~~~iv~~Ll~~ga~~~~~~~~l~~A~~~g~~~~v~~Ll~~  163 (748)
                      +.++.++|++|+++| +++|.. +..|. |||+|+.  .++.+++++|+++|++++.                       
T Consensus       151 ~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~-----------------------  207 (764)
T PHA02716        151 RGIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNL-----------------------  207 (764)
T ss_pred             cCCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCC-----------------------
Confidence            468999999999999 999987 77675 8898764  4678999999999999885                       


Q ss_pred             CCCCCCccccHHHHHhhcCC--HHHHHHHHHCCCCCccchhhhhhhcCCcccCCCCCCHHHHHH---HcCCHHHHHHHHH
Q 004504          164 DLIRPHVAVHSLVTACCRGF--VDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAV---VSRQVSVVQLLLQ  238 (748)
Q Consensus       164 ~~~~~~~~~t~L~~A~~~g~--~~~v~~Ll~~gad~n~~~~~~~~~~~~~~~~~~~~t~L~~A~---~~g~~~iv~~Ll~  238 (748)
                         .+..|.||||+|+..|+  .++|++|+++|+|+|.++.             .|.||||+|+   .+++.++++.|++
T Consensus       208 ---kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~-------------~G~TPLh~Ai~~a~n~~~EIvkiLie  271 (764)
T PHA02716        208 ---QNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCV-------------NGMSPIMTYIINIDNINPEITNIYIE  271 (764)
T ss_pred             ---CCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCC-------------CCCCHHHHHHHhhhccCHHHHHHHHH
Confidence               56678999999999985  4899999999999999884             4999999875   5678999999998


Q ss_pred             cCCCCCcccccCCccccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhcccCCCCCCCCchHHHHHHHcCCHH
Q 004504          239 AGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTG  318 (748)
Q Consensus       239 ~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~L~~A~~~g~~~  318 (748)
                      .+......                                                     ........+..|+..|+.+
T Consensus       272 ~~d~n~~~-----------------------------------------------------~~~~~L~~~i~AA~~g~le  298 (764)
T PHA02716        272 SLDGNKVK-----------------------------------------------------NIPMILHSYITLARNIDIS  298 (764)
T ss_pred             hccccccc-----------------------------------------------------cchhhhHHHHHHHHcCCHH
Confidence            74321110                                                     0000011234578889999


Q ss_pred             HHHHHHhCCCCCCCCccCCCCCCcHHHHHHH--cCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH--------------
Q 004504          319 AVAVLLSCGADAQCPIRTQKTEFHPIHLAAR--LGYSTIVQSLIDSGCDLNTKTESGETALMISAK--------------  382 (748)
Q Consensus       319 ~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~--~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~--------------  382 (748)
                      ++++|+++|++++.   .+..|.||||+|+.  .++.+++++|+++|++++.+|..|.||||+|+.              
T Consensus       299 iVklLLe~GAdIN~---kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~  375 (764)
T PHA02716        299 VVYSFLQPGVKLHY---KDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDN  375 (764)
T ss_pred             HHHHHHhCCCceec---cCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccc
Confidence            99999999999874   46889999998764  467899999999999999999999999998875              


Q ss_pred             cCCHHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 004504          383 YKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKAL  462 (748)
Q Consensus       383 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~L  462 (748)
                      .++.+++++|+++|++++.++..|.||||.++......+..++++.|++.+......+                +.++.+
T Consensus       376 ~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~----------------~~~q~l  439 (764)
T PHA02716        376 DIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKH----------------RILQDL  439 (764)
T ss_pred             cChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhh----------------hhhhhh
Confidence            2567888888888888877777777766633221112233444444443332111100                001111


Q ss_pred             HhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCC
Q 004504          463 IGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNA  542 (748)
Q Consensus       463 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~  542 (748)
                      +.       ..+. ...++|.++..++.+...++.+...-..       +        ...+++..++ ......+..|.
T Consensus       440 l~-------~~d~-~~~~lhh~~a~~~~~~~~~~~~~~~~~~-------~--------~~~~v~~~~i-i~~~nvN~~D~  495 (764)
T PHA02716        440 LI-------RVDD-TPCIIHHIIAKYNIPTDLYTDEYEPYDS-------T--------KIHDVYHCAI-IERYNNAVCET  495 (764)
T ss_pred             hh-------ccCc-chhhHHHHHHhcCcchhhhhhhhhhccc-------c--------ccchhhHHHH-HhhccccccCC
Confidence            11       1111 1223566666666555444433211000       0        0111222221 22445677788


Q ss_pred             CCchHHHHHHhcCCH-----HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH-----HHHHHHHhCCCCCCCCCCCCCc
Q 004504          543 GGFYALHCAARRGDL-----DAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHG-----PMCELLISNGAVCDIKNARGET  612 (748)
Q Consensus       543 ~g~t~L~~A~~~~~~-----~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~-----~~v~~Ll~~gad~~~~~~~g~t  612 (748)
                      .|+||||+|+..|+.     +++++|++.|+|+|.+|.+|+||||+|+++|+.     ++|++||++|++++..      
T Consensus       496 ~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~~~~~------  569 (764)
T PHA02716        496 SGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNVDIV------  569 (764)
T ss_pred             CCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCCcchH------
Confidence            899999999988866     556999999999999999999999999999976     9999999999998866      


Q ss_pred             HHHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCc
Q 004504          613 ALSLARKNSSMKNDAELVILDEVARMLVLGGGHV  646 (748)
Q Consensus       613 ~L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~  646 (748)
                      .|++|......          +++.+|..+|+.+
T Consensus       570 ~l~~~~~~~~~----------~~~~ll~~~~~~~  593 (764)
T PHA02716        570 IIFLDKCYANG----------KFPSLLLSEDDII  593 (764)
T ss_pred             HHHHHhhhhhh----------HHHHHHHHcchhH
Confidence            47888766433          5777777777644

>PHA02730 ankyrin-like protein; Provisional

Probab=100.00  E-value=2.1e-46  Score=397.87  Aligned_cols=434  Identities=13%  Similarity=0.100  Sum_probs=298.1

Q ss_pred             hhhhhccCCCcccchhhhcccCCchHHHHHHhcC---CHHHHHHHHHcCCCCCcccccCh-hHHHHHHhC--cHHHHHHH
Q 004504           58 TEVVLREGKPSEVRVEFEEFKSDVTALFLAAHSG---NVTLVKKLLSTGADVNQKLFRGF-ATTIAVREG--HLEILEIL  131 (748)
Q Consensus        58 ~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~g---~~~iv~~Ll~~ga~~~~~~~~g~-~l~~A~~~g--~~~iv~~L  131 (748)
                      ++++++.++...    ......|.||||+|+..|   +.++|++|+++||+++.+|..|. |||+|+..+  +.|+|++|
T Consensus        23 ~~~~~~~~~~in----~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~L   98 (672)
T PHA02730         23 IKLEIETCHNLS----KHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLL   98 (672)
T ss_pred             HHHHHHHhcchh----hhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHH
Confidence            455555553222    123367999999999997   59999999999999999999885 999999977  79999999


Q ss_pred             HHcCCCCccchhHHHHHHhcCcHHHHHHHhcCCCCCCCccccHHHHHhh--cCCHHHHHHHHH-CCCCCccchhhhhhhc
Q 004504          132 LKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACC--RGFVDVVDTLMK-CGVDINATDRLLLQSL  208 (748)
Q Consensus       132 l~~ga~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~t~L~~A~~--~g~~~~v~~Ll~-~gad~n~~~~~~~~~~  208 (748)
                      +++|+..+..                        ..+..+.+||+.++.  +++.++|++|++ .++|++.....     
T Consensus        99 l~~~~~~~~~------------------------~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~-----  149 (672)
T PHA02730         99 ISSYSNASNE------------------------LTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNY-----  149 (672)
T ss_pred             HhcCCCCCcc------------------------cccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhh-----
Confidence            9997755320                        023446778888777  899999999996 67898876321     


Q ss_pred             CCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccCCccccCCCcchhhhhcccCCccccchhhHHHhhhhHHH
Q 004504          209 KPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSI  288 (748)
Q Consensus       209 ~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  288 (748)
                         .....|.+|+++|...++.++|++|+++|++++.....+. ..                                  
T Consensus       150 ---~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~-~~----------------------------------  191 (672)
T PHA02730        150 ---YIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSC-MY----------------------------------  191 (672)
T ss_pred             ---hccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccc-cc----------------------------------
Confidence               0001488999999999999999999999999853210000 00                                  


Q ss_pred             HHHHhcccCCCCCCCCchHHHHH------HHcCCHHHHHHHHhCCCCCCCCccCCCCCCcHHHH--HHHcCCHHHHHHHH
Q 004504          289 LRMLLQHLSYNSPHYGRTLLHHA------ILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHL--AARLGYSTIVQSLI  360 (748)
Q Consensus       289 ~~~Ll~~~~~~~~~~g~t~L~~A------~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~--A~~~g~~~iv~~Ll  360 (748)
                                 .+.-..|.||++      ...++.+++++|+++|++++.   .+..|.||||+  |...|+.|+|++|+
T Consensus       192 -----------~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~---kd~~G~TpLh~~~~~~~~~~eiv~~Li  257 (672)
T PHA02730        192 -----------DSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHG---RDEGGSLPIQYYWSCSTIDIEIVKLLI  257 (672)
T ss_pred             -----------cCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCC---CCCCCCCHHHHHHHcCcccHHHHHHHH
Confidence                       111223455533      355789999999999999984   56899999995  55567799999999


Q ss_pred             HcCCCCCCCCCC----CCcHHHHHH----H----cCCHHHHHHHHHcCCCC-------CccccCCCC------hhhhh--
Q 004504          361 DSGCDLNTKTES----GETALMISA----K----YKQEECVKVLAKAGADF-------GLVSVSGQS------ASSIA--  413 (748)
Q Consensus       361 ~~g~~~~~~~~~----g~t~L~~A~----~----~~~~~~v~~Ll~~ga~~-------~~~~~~g~t------~l~~a--  413 (748)
                      +...+-..-+..    -+-.|+--.    +    .-+.++|++|++.+-..       ...+..|.+      .+-..  
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~  337 (672)
T PHA02730        258 KDVDTCSVYDDISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQ  337 (672)
T ss_pred             hccccccccccccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhc
Confidence            832221111110    011111100    0    11357888888855431       113334432      00000  


Q ss_pred             -hccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC---CHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCC
Q 004504          414 -GSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAG---DIAALKALIGREELNLDYQDDNGFSAVMVAASKGH  489 (748)
Q Consensus       414 -~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~---~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~  489 (748)
                       -+.    ..+.                     .|+.-...+   +.+++++|+++| +++|.. ..|.||||+|+..++
T Consensus       338 ~~~~----~~q~---------------------~l~~Y~~~~~~v~ieIvelLIs~G-AdIN~k-~~G~TpLH~Aa~~nn  390 (672)
T PHA02730        338 QDES----IVQA---------------------MLINYLHYGDMVSIPILRCMLDNG-ATMDKT-TDNNYPLHDYFVNNN  390 (672)
T ss_pred             cchh----HHHH---------------------HHHHHHhcCCcCcHHHHHHHHHCC-CCCCcC-CCCCcHHHHHHHHcC
Confidence             000    0011                     333333333   577788888776 677764 677788887777664


Q ss_pred             ----HHHHHHHHHCCC--CCccCCCCCCcHHHH---HHHcCC---------hhHHHHHHHHHhhhcCCCCCCCchHHHHH
Q 004504          490 ----VEVFRELVYAGA--DVKLLNKSGKTAIML---SELNQN---------CDLFEKVMLEFALEKGNRNAGGFYALHCA  551 (748)
Q Consensus       490 ----~~~v~~Ll~~ga--d~~~~~~~g~t~L~~---A~~~~~---------~~~~~~ll~~~~~~~~~~~~~g~t~L~~A  551 (748)
                          .+++++|+++|+  +++.+|..|.||||.   |...+.         .++++. |...+.+++.+|..|+||||+|
T Consensus       391 n~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~-LIs~GADINakD~~G~TPLh~A  469 (672)
T PHA02730        391 NIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDI-LSKYMDDIDMIDNENKTLLYYA  469 (672)
T ss_pred             CcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHHHH-HHhcccchhccCCCCCCHHHHH
Confidence                688888888776  577777778888873   222221         123443 3456667777888888999999


Q ss_pred             HhcCCHHHHHHHHhCCCCCCCCCC-CCCcHHHHHHHc--CCHHHHHHHHhCCCCCC
Q 004504          552 ARRGDLDAVRLLTSRGYGVNVPDG-DGYTPLMLAARE--GHGPMCELLISNGAVCD  604 (748)
Q Consensus       552 ~~~~~~~~v~~Ll~~g~d~n~~d~-~g~tpL~~A~~~--~~~~~v~~Ll~~gad~~  604 (748)
                      +..++.+++++|+++|+++|.+|. .|.||||+|+..  ++.+++++|+++|++++
T Consensus       470 a~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i~  525 (672)
T PHA02730        470 VDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTLE  525 (672)
T ss_pred             HHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCHH
Confidence            999999999999999999999997 699999999974  78999999999999874

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=100.00  E-value=2.4e-47  Score=392.81  Aligned_cols=369  Identities=23%  Similarity=0.257  Sum_probs=304.6

Q ss_pred             CCCccccHHHHHhhcCCHHHHHHHHHCCCCCccchhhhhhhcCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc
Q 004504          167 RPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMK  246 (748)
Q Consensus       167 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~  246 (748)
                      .+..+.+|||+|+.....+.+++|++.|+|.+..+..             +.+|+|+|+..++.+.++.|+++|+|++..
T Consensus        84 ~D~~~n~~l~~a~~~~~~~~i~~Lls~gad~~~~n~~-------------~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~  150 (929)
T KOG0510|consen   84 KDSADNTPLHAAVEYNQGDKIQVLLSYGADTPLRNLN-------------KNAPLHLAADSGNYSCLKLLLDYGADVNLE  150 (929)
T ss_pred             hhcccCchhHHHhhcchHHHHHHHHhcCCCCChhhhh-------------ccCchhhccccchHHHHHHHHHhcCCcccc
Confidence            3556788999999999999999999999998888743             889999999999999999999999888864


Q ss_pred             cccCCccccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhC
Q 004504          247 VRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSC  326 (748)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~  326 (748)
                                                                            +..|.||||.|+..++.|..+.|++.
T Consensus       151 ------------------------------------------------------de~~~TpLh~A~~~~~~E~~k~Li~~  176 (929)
T KOG0510|consen  151 ------------------------------------------------------DENGFTPLHLAARKNKVEAKKELINK  176 (929)
T ss_pred             ------------------------------------------------------ccCCCchhhHHHhcChHHHHHHHHhc
Confidence                                                                  55778899999999999988899999


Q ss_pred             CCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHH-----cCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc
Q 004504          327 GADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLID-----SGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGL  401 (748)
Q Consensus       327 g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~  401 (748)
                      |+++-   ..+..|.+|+|.|++.|..|+.+..+.     ++..+|..+..+.||||.|+..|+.++++.+++.|+....
T Consensus       177 ~a~~~---K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~  253 (929)
T KOG0510|consen  177 GADPC---KSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIAD  253 (929)
T ss_pred             CCCCC---cccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccch
Confidence            98875   456888889999999999999999987     5677888888899999999999999999999988765422


Q ss_pred             cccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCChHH
Q 004504          402 VSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAV  481 (748)
Q Consensus       402 ~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L  481 (748)
                      .-                                                 .+..+..+.       .++..|.+|.|||
T Consensus       254 ~~-------------------------------------------------~~~~~q~ke-------lv~~~d~dg~tpL  277 (929)
T KOG0510|consen  254 VQ-------------------------------------------------LDAMQQEKE-------LVNDEDNDGCTPL  277 (929)
T ss_pred             hh-------------------------------------------------hHHHHHHHH-------HhhcccccCCchH
Confidence            10                                                 001112222       3455799999999


Q ss_pred             HHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHH-HHhhhcCCCCCCCchHHHHHHhcCCHHHH
Q 004504          482 MVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVML-EFALEKGNRNAGGFYALHCAARRGDLDAV  560 (748)
Q Consensus       482 ~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v  560 (748)
                      |+|++.|+++.++.|+..|++++.++.++.||||.|+..|+.+.++.||. ......+..|..|.||||.|+++|+.+++
T Consensus       278 H~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~  357 (929)
T KOG0510|consen  278 HYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVV  357 (929)
T ss_pred             HHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHH
Confidence            99999999999999999999999999999999999999999999999999 55567788899999999999999999999


Q ss_pred             HHHHhCCCCCC---CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhc--------CCCCchh--
Q 004504          561 RLLTSRGYGVN---VPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKN--------SSMKNDA--  627 (748)
Q Consensus       561 ~~Ll~~g~d~n---~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~--------~~~~~~~--  627 (748)
                      ++|+++|++.+   ..|.+|.||||+|+..|+..+|++|+.+||++..+|+.|.|++++--..        .....+.  
T Consensus       358 qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~SA~~~~~~~~~p~~~~~~~~n~c~~~  437 (929)
T KOG0510|consen  358 QLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKGKSAFDTRPDRCLPVFVHRSPFNKCPTT  437 (929)
T ss_pred             HHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccccccccccccccccccHHHhhCCCCCcchh
Confidence            99999999987   5699999999999999999999999999999999999999999841111        0111111  


Q ss_pred             H-HHHHHHHHHHHHhCCCCcccccCCCCCCCchhh
Q 004504          628 E-LVILDEVARMLVLGGGHVLKHTKGGKGTPHRKD  661 (748)
Q Consensus       628 ~-~~~~~~~~~~Ll~~ga~~~~~d~~g~t~l~~a~  661 (748)
                      + ...+.++++..++.-......++++.||..+-+
T Consensus       438 ~~i~~~pe~~e~vlD~c~l~~~e~~~~~~~~Q~~~  472 (929)
T KOG0510|consen  438 ELIEPLPECFEIVLDFCILKSQERKDSPTPLQDEA  472 (929)
T ss_pred             hhhccchHHHHHHHHHHHHHHhhccCCCChhhhhh
Confidence            1 112357778887777666677778888876433

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=6.9e-46  Score=402.27  Aligned_cols=364  Identities=16%  Similarity=0.100  Sum_probs=270.0

Q ss_pred             CCccccHHHHHhh--cCCHHHHHHHHHCCCCCccchhhhhhhcCCcccCCCCCCHHHHHHHcCC--HHHHHHHHHcCCCC
Q 004504          168 PHVAVHSLVTACC--RGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQ--VSVVQLLLQAGANT  243 (748)
Q Consensus       168 ~~~~~t~L~~A~~--~g~~~~v~~Ll~~gad~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~--~~iv~~Ll~~ga~~  243 (748)
                      +..|.||||.|+.  .++.+++++|+++|+++|..+.             .|.||||+|+..|+  .++|++|+++||++
T Consensus       174 d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~-------------~G~TPLH~Aa~~g~~~~eIVklLLe~GADV  240 (764)
T PHA02716        174 KKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNN-------------HLITPLHTYLITGNVCASVIKKIIELGGDM  240 (764)
T ss_pred             CCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCC-------------CCCCHHHHHHHcCCCCHHHHHHHHHcCCCC
Confidence            5678999998864  4678999999999999999884             59999999999995  58999999999999


Q ss_pred             CcccccCCccccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhcccCCCCCCCCchHHHHHH---HcCCHHHH
Q 004504          244 DMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAI---LCGCTGAV  320 (748)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~L~~A~---~~g~~~~v  320 (748)
                      +.+                                                      +..|.||||.|+   ..++.+++
T Consensus       241 N~k------------------------------------------------------D~~G~TPLh~Ai~~a~n~~~EIv  266 (764)
T PHA02716        241 DMK------------------------------------------------------CVNGMSPIMTYIINIDNINPEIT  266 (764)
T ss_pred             CCC------------------------------------------------------CCCCCCHHHHHHHhhhccCHHHH
Confidence            875                                                      457889999875   56799999


Q ss_pred             HHHHhCCCCCCCCccCCCCCCcHHH---HHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH--cCCHHHHHHHHHc
Q 004504          321 AVLLSCGADAQCPIRTQKTEFHPIH---LAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAK--YKQEECVKVLAKA  395 (748)
Q Consensus       321 ~~Ll~~g~~~~~~~~~~~~~~t~L~---~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~--~~~~~~v~~Ll~~  395 (748)
                      +.|++.+.....     ....++++   .|++.|+.+++++|+++|++++.+|..|+||||+|+.  .++.+++++|+++
T Consensus       267 kiLie~~d~n~~-----~~~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~  341 (764)
T PHA02716        267 NIYIESLDGNKV-----KNIPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNISTDIIKLLHEY  341 (764)
T ss_pred             HHHHHhcccccc-----ccchhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCCchHHHHHHHc
Confidence            999987533211     11222343   4788999999999999999999999999999998764  4678999999999


Q ss_pred             CCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCC
Q 004504          396 GADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDD  475 (748)
Q Consensus       396 ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~  475 (748)
                      |++++.+|..|.||||+|+....      .+     .+.+..            +...++.+++++|+++| ++++.++.
T Consensus       342 GADIN~kD~~G~TPLH~A~~~la------v~-----~~ld~~------------~~~~~~~eVVklLL~~G-ADIn~kn~  397 (764)
T PHA02716        342 GNDLNEPDNIGNTVLHTYLSMLS------VV-----NILDPE------------TDNDIRLDVIQCLISLG-ADITAVNC  397 (764)
T ss_pred             CCCCccCCCCCCCHHHHHHHhhh------hh-----cccccc------------ccccChHHHHHHHHHCC-CCCCCcCC
Confidence            99999999999998887743200      00     000000            01246789999999886 78999999


Q ss_pred             CCChHHHH----HHHcCCHHHHHHHHHCCCCCccCCC--------CCCcH--HHHHHHcCChhHHHHHHHHHhhhcCCCC
Q 004504          476 NGFSAVMV----AASKGHVEVFRELVYAGADVKLLNK--------SGKTA--IMLSELNQNCDLFEKVMLEFALEKGNRN  541 (748)
Q Consensus       476 ~g~t~L~~----A~~~~~~~~v~~Ll~~gad~~~~~~--------~g~t~--L~~A~~~~~~~~~~~ll~~~~~~~~~~~  541 (748)
                      .|.||||.    |...++.+++++|++.|+.....+.        .+.+|  +|.++..++.+....+.           
T Consensus       398 ~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~-----------  466 (764)
T PHA02716        398 LGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTD-----------  466 (764)
T ss_pred             CCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhh-----------
Confidence            99999983    2235678999999988765433322        12222  33444333333221111           


Q ss_pred             CCCchHHHHHH-hcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH-----HHHHHHHhCCCCCCCCCCCCCcHHH
Q 004504          542 AGGFYALHCAA-RRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHG-----PMCELLISNGAVCDIKNARGETALS  615 (748)
Q Consensus       542 ~~g~t~L~~A~-~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~-----~~v~~Ll~~gad~~~~~~~g~t~L~  615 (748)
                            .+..+ .....+++..++..+.++|..|..|+||||+|+..|+.     +++++|++.|||+|.+|+.|+||||
T Consensus       467 ------~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G~TPLh  540 (764)
T PHA02716        467 ------EYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKNGVTPLM  540 (764)
T ss_pred             ------hhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCCCCCCHHH
Confidence                  11100 01223455566667889999999999999999999876     4569999999999999999999999


Q ss_pred             HHHhcCCCCchhHHHHHHHHHHHHHhCCCCcccc
Q 004504          616 LARKNSSMKNDAELVILDEVARMLVLGGGHVLKH  649 (748)
Q Consensus       616 ~A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~  649 (748)
                      +|+.+++.....     .+++++|+++|++++..
T Consensus       541 ~A~~~g~~~~~~-----~eIvk~LL~~ga~~~~~  569 (764)
T PHA02716        541 LTMRNNRLSGHQ-----WYIVKNILDKRPNVDIV  569 (764)
T ss_pred             HHHHcCCccccH-----HHHHHHHHhcCCCcchH
Confidence            999986542111     27999999999998876

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=100.00  E-value=7.7e-45  Score=374.37  Aligned_cols=335  Identities=23%  Similarity=0.332  Sum_probs=281.7

Q ss_pred             CCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 004504          301 PHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMIS  380 (748)
Q Consensus       301 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A  380 (748)
                      ...|.|++|.|+..+..      ++.-....   ..+..+.||||+|+.....+.+++|++.|++++..+.++.+|+|+|
T Consensus        58 ~~~gd~~~~~~~~~~y~------~~~~~~~~---a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad~~~~n~~~~aplh~A  128 (929)
T KOG0510|consen   58 RAFGDTELHHASARNYI------LSKLAISY---AKDSADNTPLHAAVEYNQGDKIQVLLSYGADTPLRNLNKNAPLHLA  128 (929)
T ss_pred             hhhchhHHHHHHhhcch------hhhhhhhh---hhhcccCchhHHHhhcchHHHHHHHHhcCCCCChhhhhccCchhhc
Confidence            44677788887777644      11111111   2346677788888888888888888888888888888888888888


Q ss_pred             HHcCCHHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHH
Q 004504          381 AKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALK  460 (748)
Q Consensus       381 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~  460 (748)
                      +..++.++.+.|+++|+|++..|..+.||||+|+..    +..+..+.|+..|+++...+.+|++|+|.|+++|..+..+
T Consensus       129 ~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~----~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s~e~mE  204 (929)
T KOG0510|consen  129 ADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAARK----NKVEAKKELINKGADPCKSDIDGNFPIHEAARSGSKECME  204 (929)
T ss_pred             cccchHHHHHHHHHhcCCccccccCCCchhhHHHhc----ChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcchhhhh
Confidence            888888888888888888888888888888888765    5566777778888888888888889999999999999999


Q ss_pred             HHHhcC----CCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCC---------------CccCCCCCCcHHHHHHHcC
Q 004504          461 ALIGRE----ELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGAD---------------VKLLNKSGKTAIMLSELNQ  521 (748)
Q Consensus       461 ~Ll~~~----~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad---------------~~~~~~~g~t~L~~A~~~~  521 (748)
                      ..+.+.    ...+|..+..+.||||.|+..|+.++++.+++.|..               +|..|++|.||||+|+..|
T Consensus       205 i~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G  284 (929)
T KOG0510|consen  205 IFLPEHGYERQTHINFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQG  284 (929)
T ss_pred             hhhccccchhhcccccccCCCCcchhhhhhcCCHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcC
Confidence            999832    257888999999999999999999999999998754               3556899999999999999


Q ss_pred             ChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHh-CC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 004504          522 NCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTS-RG-YGVNVPDGDGYTPLMLAAREGHGPMCELLISN  599 (748)
Q Consensus       522 ~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g-~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~  599 (748)
                      +.+.++.|+ ..+.+++.++.++.||||.||..|++++++-||+ .| ...|..|..|+||||+|+++||..++++||+.
T Consensus       285 ~~~svd~Ll-~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~  363 (929)
T KOG0510|consen  285 GPESVDNLL-GFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNK  363 (929)
T ss_pred             ChhHHHHHH-HcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhc
Confidence            999997655 5678999999999999999999999999999999 44 45789999999999999999999999999999


Q ss_pred             CCCCC---CCCCCCCcHHHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCcccccCCCCCCCch
Q 004504          600 GAVCD---IKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHR  659 (748)
Q Consensus       600 gad~~---~~~~~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~d~~g~t~l~~  659 (748)
                      ||+..   ..|.+|.||||.|+..|+.          .++++|+.+||++..+++.|+|++++
T Consensus       364 GA~~~~~~e~D~dg~TaLH~Aa~~g~~----------~av~~Li~~Ga~I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  364 GALFLNMSEADSDGNTALHLAAKYGNT----------SAVQKLISHGADIGVKNKKGKSAFDT  416 (929)
T ss_pred             ChhhhcccccccCCchhhhHHHHhccH----------HHHHHHHHcCCceeeccccccccccc
Confidence            99976   5699999999999999765          69999999999999999999999996

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.9e-43  Score=379.31  Aligned_cols=326  Identities=20%  Similarity=0.269  Sum_probs=286.5

Q ss_pred             HHHHHhhcCCHHHHHHHHHC-CCCCccchhhhhhhcCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccCCc
Q 004504          174 SLVTACCRGFVDVVDTLMKC-GVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAW  252 (748)
Q Consensus       174 ~L~~A~~~g~~~~v~~Ll~~-gad~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~  252 (748)
                      .|..|+..|++++++.|++. +..++..+             ..+.||||.|+..|+.++|++|+++|++++..      
T Consensus         4 ~l~~ai~~gd~~~v~~ll~~~~~~~n~~~-------------~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~------   64 (434)
T PHA02874          4 DLRMCIYSGDIEAIEKIIKNKGNCINISV-------------DETTTPLIDAIRSGDAKIVELFIKHGADINHI------   64 (434)
T ss_pred             HHHHHHhcCCHHHHHHHHHcCCCCCCCcC-------------CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC------
Confidence            58889999999999999975 45566665             34899999999999999999999999998864      


Q ss_pred             cccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCC
Q 004504          253 SWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQC  332 (748)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~  332 (748)
                                                                      +..|.||||.|+..|+.+++++|+++|+++..
T Consensus        65 ------------------------------------------------~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~   96 (434)
T PHA02874         65 ------------------------------------------------NTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSI   96 (434)
T ss_pred             ------------------------------------------------CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCc
Confidence                                                            44678999999999999999999999998642


Q ss_pred             CccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCChhhh
Q 004504          333 PIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSI  412 (748)
Q Consensus       333 ~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~  412 (748)
                      .             +......+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.     
T Consensus        97 ~-------------~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~-----  158 (434)
T PHA02874         97 L-------------PIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGC-----  158 (434)
T ss_pred             c-------------hhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCC-----
Confidence            1             2334578999999999999999999999999999999999999999999999887766554     


Q ss_pred             hhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHH
Q 004504          413 AGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEV  492 (748)
Q Consensus       413 a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~  492 (748)
                                                      ||||+|+..++.+++++|++.+ ++++..+..|.||||+|+..|+.++
T Consensus       159 --------------------------------tpLh~A~~~~~~~iv~~Ll~~g-~~~n~~~~~g~tpL~~A~~~g~~~i  205 (434)
T PHA02874        159 --------------------------------YPIHIAIKHNFFDIIKLLLEKG-AYANVKDNNGESPLHNAAEYGDYAC  205 (434)
T ss_pred             --------------------------------CHHHHHHHCCcHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCCHHH
Confidence                                            4888889999999999999987 7899999999999999999999999


Q ss_pred             HHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcC-CHHHHHHHHhCCCCCC
Q 004504          493 FRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRG-DLDAVRLLTSRGYGVN  571 (748)
Q Consensus       493 v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~-~~~~v~~Ll~~g~d~n  571 (748)
                      +++|+++|++++.++..|.||||.|+..+. +.+..|+  .+.+++..|..|+||||+|+..+ +.+++++|+++|+|++
T Consensus       206 v~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll--~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n  282 (434)
T PHA02874        206 IKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI--NNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADIS  282 (434)
T ss_pred             HHHHHhCCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH--cCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCC
Confidence            999999999999999999999999999765 4555555  46778899999999999999876 8999999999999999


Q ss_pred             CCCCCCCcHHHHHHHcC-CHHHHHHHHhCCCCCCCCCCCC-CcHHHHHHhc
Q 004504          572 VPDGDGYTPLMLAAREG-HGPMCELLISNGAVCDIKNARG-ETALSLARKN  620 (748)
Q Consensus       572 ~~d~~g~tpL~~A~~~~-~~~~v~~Ll~~gad~~~~~~~g-~t~L~~A~~~  620 (748)
                      .+|..|.||||+|++.+ +.++++.|+++++.++..+..+ .+++..+...
T Consensus       283 ~~d~~g~TpL~~A~~~~~~~~~ik~ll~~~~~~~~~~~~~~~~~~~~~~i~  333 (434)
T PHA02874        283 IKDNKGENPIDTAFKYINKDPVIKDIIANAVLIKEADKLKDSDFLEHIEIK  333 (434)
T ss_pred             CCCCCCCCHHHHHHHhCCccHHHHHHHHhcCchhhccccchhHHHHHHHHh
Confidence            99999999999999987 7889999999999887666655 5556666544

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=3.6e-43  Score=377.23  Aligned_cols=318  Identities=20%  Similarity=0.264  Sum_probs=284.4

Q ss_pred             hHHHHHHHcCCHHHHHHHHhCCC-CCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC
Q 004504          306 TLLHHAILCGCTGAVAVLLSCGA-DAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYK  384 (748)
Q Consensus       306 t~L~~A~~~g~~~~v~~Ll~~g~-~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~  384 (748)
                      ..|..|+..|+.+.++.|++.+. .++.   .+..+.||||.|+..|+.++|++|+++|++++..+..|.||||.|+..|
T Consensus         3 ~~l~~ai~~gd~~~v~~ll~~~~~~~n~---~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~   79 (434)
T PHA02874          3 QDLRMCIYSGDIEAIEKIIKNKGNCINI---SVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIG   79 (434)
T ss_pred             HHHHHHHhcCCHHHHHHHHHcCCCCCCC---cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence            36889999999999999998654 3442   3467899999999999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 004504          385 QEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIG  464 (748)
Q Consensus       385 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~  464 (748)
                      +.+++++|+++|+++.....              .....++++.+++.|.+++..+..|.||||+|+..|+.+++++|++
T Consensus        80 ~~~iv~~Ll~~g~~~~~~~~--------------~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~  145 (434)
T PHA02874         80 AHDIIKLLIDNGVDTSILPI--------------PCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFE  145 (434)
T ss_pred             CHHHHHHHHHCCCCCCcchh--------------ccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHh
Confidence            99999999999998754211              1134678999999999999999999999999999999999999999


Q ss_pred             cCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCC
Q 004504          465 REELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGG  544 (748)
Q Consensus       465 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g  544 (748)
                      ++ ++++.++..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..|+.+++++|+.. +.+++..+..|
T Consensus       146 ~g-ad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~-g~~i~~~~~~g  223 (434)
T PHA02874        146 YG-ADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDH-GNHIMNKCKNG  223 (434)
T ss_pred             CC-CCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCcCCCCCC
Confidence            87 79999999999999999999999999999999999999999999999999999999999888765 45778888999


Q ss_pred             chHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC-CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCC
Q 004504          545 FYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREG-HGPMCELLISNGAVCDIKNARGETALSLARKNSSM  623 (748)
Q Consensus       545 ~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~-~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~  623 (748)
                      .||||.|+..+. +++++|+ .|+++|.+|..|+||||+|+..+ +.+++++|+++|+|++.+|..|+||||+|+..++.
T Consensus       224 ~TpL~~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~~~~~~  301 (434)
T PHA02874        224 FTPLHNAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKGENPIDTAFKYINK  301 (434)
T ss_pred             CCHHHHHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCc
Confidence            999999999865 5677776 68999999999999999999875 89999999999999999999999999999987533


Q ss_pred             CchhHHHHHHHHHHHHHhCCCCcccccCCC
Q 004504          624 KNDAELVILDEVARMLVLGGGHVLKHTKGG  653 (748)
Q Consensus       624 ~~~~~~~~~~~~~~~Ll~~ga~~~~~d~~g  653 (748)
                      .         ++++.|+.+++.++..+..+
T Consensus       302 ~---------~~ik~ll~~~~~~~~~~~~~  322 (434)
T PHA02874        302 D---------PVIKDIIANAVLIKEADKLK  322 (434)
T ss_pred             c---------HHHHHHHHhcCchhhccccc
Confidence            2         58899999998877666555

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.1e-41  Score=372.39  Aligned_cols=292  Identities=26%  Similarity=0.378  Sum_probs=241.7

Q ss_pred             HHHHHcCCHHHHHHHHHcCCCCCcccccCCccccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhcccCCCCC
Q 004504          222 VAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSP  301 (748)
Q Consensus       222 ~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~  301 (748)
                      ..|+..++.++|++|+++|++++..                                                      +
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga~vn~~------------------------------------------------------~   44 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGADVNFR------------------------------------------------------G   44 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCCCcccC------------------------------------------------------C
Confidence            4456677888888888888888754                                                      4


Q ss_pred             CCCchHHHHHHHcC---CHHHHHHHHhCCCCCCCCccCCCCCCcHHHHHHHcC-CHHHHHHHHHcCCCCCCCCCCCCcHH
Q 004504          302 HYGRTLLHHAILCG---CTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLG-YSTIVQSLIDSGCDLNTKTESGETAL  377 (748)
Q Consensus       302 ~~g~t~L~~A~~~g---~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g-~~~iv~~Ll~~g~~~~~~~~~g~t~L  377 (748)
                      ..|.||||.|+..+   +.+++++|+++|++++..   +..|.||||+|+..| +.+++++|+++|++++.++..|.|||
T Consensus        45 ~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~---~~~g~TpLh~A~~~~~~~~iv~lLl~~ga~in~~~~~g~tpL  121 (471)
T PHA03095         45 EYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAP---ERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPL  121 (471)
T ss_pred             CCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCC---CCCCCCHHHHHHHcCCcHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence            46778888888888   888888888888888753   457888888888888 58888888888888888888888888


Q ss_pred             HHHH--HcCCHHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC-
Q 004504          378 MISA--KYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAG-  454 (748)
Q Consensus       378 ~~A~--~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~-  454 (748)
                      |+|+  ..++.+++++|+++|++++..+..|.|                                     |||.|+..+ 
T Consensus       122 h~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~t-------------------------------------pL~~a~~~~~  164 (471)
T PHA03095        122 HVYLSGFNINPKVIRLLLRKGADVNALDLYGMT-------------------------------------PLAVLLKSRN  164 (471)
T ss_pred             HHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCC-------------------------------------HHHHHHHcCC
Confidence            8888  455778888888888888777776666                                     555555443 


Q ss_pred             -CHHHHHHHHhcCCCCccccCCCCChHHHHHHHc--CCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChh-HHHHHH
Q 004504          455 -DIAALKALIGREELNLDYQDDNGFSAVMVAASK--GHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCD-LFEKVM  530 (748)
Q Consensus       455 -~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~-~~~~ll  530 (748)
                       +.+++++|++.+ ++++..+..|.||||+|+..  ++.++++.|+++|++++.+|..|+||||+|+..++.. .+..++
T Consensus       165 ~~~~iv~~Ll~~g-~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~l  243 (471)
T PHA03095        165 ANVELLRLLIDAG-ADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPL  243 (471)
T ss_pred             CCHHHHHHHHHcC-CCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHH
Confidence             678889998887 67777788899999988864  6788999999999999999999999999999888753 223344


Q ss_pred             HHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCC
Q 004504          531 LEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNA  608 (748)
Q Consensus       531 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~  608 (748)
                      ...+.+++.+|..|+||||+|+..|+.+++++|+++|+|+|.+|..|+||||+|+..|+.+++++|++++++++..+.
T Consensus       244 l~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~~~~~  321 (471)
T PHA03095        244 LIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAETVAA  321 (471)
T ss_pred             HHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHHHHHH
Confidence            556788888999999999999999999999999999999999999999999999999999999999999999875543

>PHA03100 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.3e-41  Score=370.47  Aligned_cols=272  Identities=25%  Similarity=0.361  Sum_probs=247.7

Q ss_pred             CCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCccCCCCCCcHHHH-----HHHcCCHHHHHHHHHcCCCCCCCCCCCC
Q 004504          300 SPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHL-----AARLGYSTIVQSLIDSGCDLNTKTESGE  374 (748)
Q Consensus       300 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~-----A~~~g~~~iv~~Ll~~g~~~~~~~~~g~  374 (748)
                      .+..+.||||.|+..|+.++|++|+++|++++.   .+..+.||||.     |+..++.+++++|+++|++++..+..|.
T Consensus        31 ~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~---~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~  107 (480)
T PHA03100         31 SYKKPVLPLYLAKEARNIDVVKILLDNGADINS---STKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGI  107 (480)
T ss_pred             hhcccchhhhhhhccCCHHHHHHHHHcCCCCCC---ccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCC
Confidence            356788999999999999999999999999874   45778899999     9999999999999999999999999999


Q ss_pred             cHHHHHH--HcCCHHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH
Q 004504          375 TALMISA--KYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQ  452 (748)
Q Consensus       375 t~L~~A~--~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~  452 (748)
                      ||||+|+  ..|+.+++++|+++|++++..+..|.                                     ||||.|+.
T Consensus       108 tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~-------------------------------------t~L~~A~~  150 (480)
T PHA03100        108 TPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGE-------------------------------------NLLHLYLE  150 (480)
T ss_pred             chhhHHHhcccChHHHHHHHHHcCCCCCccCCCCC-------------------------------------cHHHHHHH
Confidence            9999999  99999999999999998877665554                                     58888888


Q ss_pred             cC--CHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHH
Q 004504          453 AG--DIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVM  530 (748)
Q Consensus       453 ~~--~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll  530 (748)
                      .+  +.+++++|++++ ++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.++++.              
T Consensus       151 ~~~~~~~iv~~Ll~~g-~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~--------------  215 (480)
T PHA03100        151 SNKIDLKILKLLIDKG-VDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIF--------------  215 (480)
T ss_pred             cCCChHHHHHHHHHCC-CCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHH--------------
Confidence            89  999999999997 7999999999999999999999999999999999999999999888876              


Q ss_pred             HHHhhhcCCCCCCCchHHHHHHhcCC--HHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCC
Q 004504          531 LEFALEKGNRNAGGFYALHCAARRGD--LDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNA  608 (748)
Q Consensus       531 ~~~~~~~~~~~~~g~t~L~~A~~~~~--~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~  608 (748)
                                    .||||.|+..|+  .+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|+|+|.+|.
T Consensus       216 --------------~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~d~  281 (480)
T PHA03100        216 --------------ETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNK  281 (480)
T ss_pred             --------------HhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC
Confidence                          489999999999  9999999999999999999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCccccc
Q 004504          609 RGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHT  650 (748)
Q Consensus       609 ~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~d  650 (748)
                      .|.|||++|+.++..          +++++|+++|++++..+
T Consensus       282 ~g~tpl~~A~~~~~~----------~iv~~Ll~~g~~i~~i~  313 (480)
T PHA03100        282 YGDTPLHIAILNNNK----------EIFKLLLNNGPSIKTII  313 (480)
T ss_pred             CCCcHHHHHHHhCCH----------HHHHHHHhcCCCHHHHH
Confidence            999999999998554          79999999999988654

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=3.4e-41  Score=368.46  Aligned_cols=291  Identities=23%  Similarity=0.272  Sum_probs=261.7

Q ss_pred             HHHHHcCCHHHHHHHHhCCCCCCCCccCCCCCCcHHHHHHHcC---CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC-
Q 004504          309 HHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLG---YSTIVQSLIDSGCDLNTKTESGETALMISAKYK-  384 (748)
Q Consensus       309 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g---~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-  384 (748)
                      ..+...++.++|++|+++|++++.   .+..|.||||+|+..+   +.+++++|+++|+++|.++..|.||||+|+..+ 
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga~vn~---~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~   95 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGADVNF---RGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNAT   95 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCCCccc---CCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCC
Confidence            456777899999999999999884   5678999999999998   999999999999999999999999999999999 


Q ss_pred             CHHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHH--HcCCHHHHHHH
Q 004504          385 QEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVA--QAGDIAALKAL  462 (748)
Q Consensus       385 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~--~~~~~~~v~~L  462 (748)
                      +.+++++|+++|++++.++..|.|                                     |||+|+  ..++.+++++|
T Consensus        96 ~~~iv~lLl~~ga~in~~~~~g~t-------------------------------------pLh~a~~~~~~~~~iv~~L  138 (471)
T PHA03095         96 TLDVIKLLIKAGADVNAKDKVGRT-------------------------------------PLHVYLSGFNINPKVIRLL  138 (471)
T ss_pred             cHHHHHHHHHcCCCCCCCCCCCCC-------------------------------------HHHHHhhCCcCCHHHHHHH
Confidence            599999999999999888777766                                     566666  45688999999


Q ss_pred             HhcCCCCccccCCCCChHHHHHHHcC--CHHHHHHHHHCCCCCccCCCCCCcHHHHHHHc--CChhHHHHHHHHHhhhcC
Q 004504          463 IGREELNLDYQDDNGFSAVMVAASKG--HVEVFRELVYAGADVKLLNKSGKTAIMLSELN--QNCDLFEKVMLEFALEKG  538 (748)
Q Consensus       463 l~~~~~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~--~~~~~~~~ll~~~~~~~~  538 (748)
                      ++.+ ++++..+..|.||||+|+..+  +.+++++|+++|++++..+..|+||||+++..  ++.++++.|+ ..+.+++
T Consensus       139 l~~g-ad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll-~~g~~~~  216 (471)
T PHA03095        139 LRKG-ADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELI-RAGCDPA  216 (471)
T ss_pred             HHcC-CCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHH-HcCCCCc
Confidence            9987 799999999999999999876  68999999999999999999999999999875  5566666555 5678899


Q ss_pred             CCCCCCchHHHHHHhcCCH--HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHH
Q 004504          539 NRNAGGFYALHCAARRGDL--DAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSL  616 (748)
Q Consensus       539 ~~~~~g~t~L~~A~~~~~~--~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~  616 (748)
                      .+|..|+||||+|+..|+.  .+++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|||++.+|..|+||||+
T Consensus       217 ~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~  296 (471)
T PHA03095        217 ATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSL  296 (471)
T ss_pred             ccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence            9999999999999999965  68899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhcCCCCchhHHHHHHHHHHHHHhCCCCcccccC
Q 004504          617 ARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTK  651 (748)
Q Consensus       617 A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~d~  651 (748)
                      |+.+++.          ++++.|+++|++++..+.
T Consensus       297 A~~~~~~----------~~v~~LL~~~~~~~~~~~  321 (471)
T PHA03095        297 MVRNNNG----------RAVRAALAKNPSAETVAA  321 (471)
T ss_pred             HHHhCCH----------HHHHHHHHhCCCHHHHHH
Confidence            9999765          799999999998865544

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=100.00  E-value=1.2e-41  Score=329.17  Aligned_cols=474  Identities=25%  Similarity=0.301  Sum_probs=291.0

Q ss_pred             HHHHHhcCCHHHHHHhhcCCCCCccccccccccchhhhhhhccCCCcccchhhhcccCCchHHHHHHhcCCHHHHHHHHH
Q 004504           22 LLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEVVLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLS  101 (748)
Q Consensus        22 l~~A~~~G~~~~v~~ll~~~~~d~n~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~  101 (748)
                      .+.|++.|++..+..|+-... ...           +..++            -...+|.|||.+||++||.++|++|++
T Consensus         8 ~~naa~~g~l~~l~~ll~~~s-~~e-----------i~~l~------------~~~~~g~tPL~iaaRnGH~~vVeyLle   63 (615)
T KOG0508|consen    8 VINAARDGKLQLLAKLLINSS-NEE-----------IISLI------------GEVQNGGTPLLIAARNGHADVVEYLLE   63 (615)
T ss_pred             HHHHhhhhhHHHHHHHHhCCc-hHH-----------HHHHh------------ccccCCCCceeeehhcCcHHHHHHHHH
Confidence            448999999999988887642 111           11111            112578899999999999999999999


Q ss_pred             -cCCCCCccc--------ccCh-hHHHHHHhCcHHHHHHHHHcCCCCccchhHHHHHHhcCcHHHHHHHhcCCCCCCCcc
Q 004504          102 -TGADVNQKL--------FRGF-ATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVA  171 (748)
Q Consensus       102 -~ga~~~~~~--------~~g~-~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~  171 (748)
                       .++++.+..        ..|. ||-.|+-.||++|||.|+++|+++|.                          .....
T Consensus        64 ~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~--------------------------tT~TN  117 (615)
T KOG0508|consen   64 HCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVND--------------------------TTRTN  117 (615)
T ss_pred             HhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCcccc--------------------------ccccC
Confidence             578776432        2334 67788899999999999999999985                          33445


Q ss_pred             ccHHHHHhhcCCHHHHHHHHHCCCCCccchhhhhhhcCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccCC
Q 004504          172 VHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGA  251 (748)
Q Consensus       172 ~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~  251 (748)
                      .|||..||..|++++||+|+++|+|++..++.             |.|.|+.||..|+.+|+++|++.|+|+|.+     
T Consensus       118 StPLraACfDG~leivKyLvE~gad~~Ianrh-------------GhTcLmIa~ykGh~~I~qyLle~gADvn~k-----  179 (615)
T KOG0508|consen  118 STPLRAACFDGHLEIVKYLVEHGADPEIANRH-------------GHTCLMIACYKGHVDIAQYLLEQGADVNAK-----  179 (615)
T ss_pred             CccHHHHHhcchhHHHHHHHHcCCCCcccccC-------------CCeeEEeeeccCchHHHHHHHHhCCCcchh-----
Confidence            69999999999999999999999999999954             999999999999999999999999999975     


Q ss_pred             ccccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCC
Q 004504          252 WSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQ  331 (748)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~  331 (748)
                                                                       +..|+|+||.++..|+.+++++|+.+|+.++
T Consensus       180 -------------------------------------------------s~kGNTALH~caEsG~vdivq~Ll~~ga~i~  210 (615)
T KOG0508|consen  180 -------------------------------------------------SYKGNTALHDCAESGSVDIVQLLLKHGAKID  210 (615)
T ss_pred             -------------------------------------------------cccCchHHHhhhhcccHHHHHHHHhCCceee
Confidence                                                             5578999999999999999999999999886


Q ss_pred             CCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC----CCCCCCCCCc------HHHHHHHcCCHHHHHHHHHcCCCCCc
Q 004504          332 CPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCD----LNTKTESGET------ALMISAKYKQEECVKVLAKAGADFGL  401 (748)
Q Consensus       332 ~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~----~~~~~~~g~t------~L~~A~~~~~~~~v~~Ll~~ga~~~~  401 (748)
                          .+..|.|||..|+..|+.++|++|++...+    ++...--|.|      -+.-|.... .+..+.=...|-.+  
T Consensus       211 ----~d~~GmtPL~~Aa~tG~~~iVe~L~~~~~sr~~riealEllGat~~dkk~D~~~al~~w-~~aMe~r~~~~e~~--  283 (615)
T KOG0508|consen  211 ----VDGHGMTPLLLAAVTGHTDIVERLLQCETSRESRIEALELLGATYVDKKRDLLGALKYW-RRAMEERESDGESI--  283 (615)
T ss_pred             ----ecCCCCchHHHHhhhcchHHHHHHhcCCcchhhHHHHHHHhcccccchhHHHHHHHHHH-HHHHHhhhhccccc--
Confidence                357799999999999999999999963211    1111111111      111111100 01111001101111  


Q ss_pred             cccCCCChhhhhhccccc-------------cchHHHHHHHHHc----CCCCCCCCC----------CC-----------
Q 004504          402 VSVSGQSASSIAGSNWWS-------------VGFQRAVLDIIRS----GNIPKSSNV----------AV-----------  443 (748)
Q Consensus       402 ~~~~g~t~l~~a~~~~~~-------------~~~~~~~~~l~~~----~~~~~~~~~----------~g-----------  443 (748)
                      .......|.+ +......             .+...+...+++.    +..+...-.          .|           
T Consensus       284 ~e~e~~~p~~-ay~~~re~~~~~elE~lv~D~d~~RmqaLiirerILgpsh~d~sYyir~rgavyad~g~~~rCi~LWky  362 (615)
T KOG0508|consen  284 LEKEPLEPVL-AYGYGREVNNREELEELVEDPDEMRMQALIIRERILGPSHPDVSYYIRYRGAVYADSGEFERCIRLWKY  362 (615)
T ss_pred             cccCCCCchh-hhhhhhhcCCHHHHHHHhcChHHHHHHHHHHHHHHhCCCCCCceeEEEeeeeeecCCccHHHHHHHHHH
Confidence            0011111111 1111000             0111111111111    111111100          00           


Q ss_pred             -----------CcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHH--HCCCCCccCCCCC
Q 004504          444 -----------FSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELV--YAGADVKLLNKSG  510 (748)
Q Consensus       444 -----------~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll--~~gad~~~~~~~g  510 (748)
                                 .+|..........+++.+.+......-+.-..-+..-++.-...+-.|+=+-+-  ....|++.-++.-
T Consensus       363 AL~mqQk~l~PlspmT~ssllsFaelFS~mL~d~~~~g~~~~~i~~~~~~~Vl~k~vlEvEra~~~t~~p~d~~~~~k~l  442 (615)
T KOG0508|consen  363 ALDMQQKNLEPLSPMTASSLLSFAELFSFMLQDFAAKGSLGTQIGFDDLMGVLTKSVLEVERALALTREPLDPAQYNKAL  442 (615)
T ss_pred             HHHHHHhhcCCCCcccHHHHHHHHHHHHHHhhhhhhcCCCCCccchHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence                       001111111111233333332210000000011111222222222233322222  1122333333333


Q ss_pred             CcHHHHHHHcCChhHH---HHHHH---HHhhhcCCCCCCCchHHHHHHhcC-------------CHHHHHHHHhCCCCCC
Q 004504          511 KTAIMLSELNQNCDLF---EKVML---EFALEKGNRNAGGFYALHCAARRG-------------DLDAVRLLTSRGYGVN  571 (748)
Q Consensus       511 ~t~L~~A~~~~~~~~~---~~ll~---~~~~~~~~~~~~g~t~L~~A~~~~-------------~~~~v~~Ll~~g~d~n  571 (748)
                      .+.||+.+.....++-   +.+..   ........+...|.||||+|+..+             +..+++.|++.|+|+|
T Consensus       443 ~~~lhLv~llek~~ct~e~~~~k~~~iyrl~~l~pr~~~~ft~LH~av~~~tt~~gry~v~~fPs~~V~k~Llecgadvn  522 (615)
T KOG0508|consen  443 YIILHLVCLLEKVECTPEQDHLKHQTIYRLLKLAPRGKNGFTLLHLAVDKNTTNVGRYPVCRFPSAHVTKVLLECGADVN  522 (615)
T ss_pred             HHHHHHHHHHHhcCCChHHHHHHHHHHHHHHhccccccCCCchhhhhhccCCCCCCcccccCCcHHHHHHHHHHcCCCCC
Confidence            4555555443222110   00000   011223345678999999998653             3578999999999999


Q ss_pred             CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhc
Q 004504          572 VPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKN  620 (748)
Q Consensus       572 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~  620 (748)
                      ++|.+|+||||+|+++....++..|++.||..+++|..|+||+.+....
T Consensus       523 a~D~~~ntplHIa~~~~~~si~~aLie~Gah~datN~~~~t~~~ll~~~  571 (615)
T KOG0508|consen  523 ARDFDNNTPLHIAAQNNCPSIVNALIEAGAHLDATNAHKKTALDLLDEK  571 (615)
T ss_pred             cccCCCCchhHHHHHhccHHHHHHHHHcccchhhhhhccccHHHHhchh
Confidence            9999999999999999999999999999999999999999999887654

>PHA02792 ankyrin-like protein; Provisional

Probab=100.00  E-value=4.2e-39  Score=338.29  Aligned_cols=429  Identities=13%  Similarity=0.039  Sum_probs=239.1

Q ss_pred             hHHHHHHhcCCHHH--HHHHHHcCCCCCcccccChhHHHHHHhCcH-HHHHHHHHcCCCCccchhHHHHHHhcCcHHHHH
Q 004504           82 TALFLAAHSGNVTL--VKKLLSTGADVNQKLFRGFATTIAVREGHL-EILEILLKAGASQPACEEALLEASCHGQARLAE  158 (748)
Q Consensus        82 t~L~~A~~~g~~~i--v~~Ll~~ga~~~~~~~~g~~l~~A~~~g~~-~iv~~Ll~~ga~~~~~~~~l~~A~~~g~~~~v~  158 (748)
                      +.|.-.|+.=+++.  .+.|+++|+++-....+-|||+.=..+.|. .=++.++.-|.+++                   
T Consensus         5 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------   65 (631)
T PHA02792          5 KILYDSCKTFNIDACSAQSLIESGANPLYEYDGETPLKAYVTKKNNNIKNDVVILLLSSVD-------------------   65 (631)
T ss_pred             hHHHhHhhccchhHHHHHHHHHcCCCcccccCCCccHHHHHhhhhhhHHHHHHHHHHhCCC-------------------
Confidence            34444555444433  568888999887654444677655444442 12223333333332                   


Q ss_pred             HHhcCCCCCCCccccHHHH-HhhcCCHHHHHHHHHCCCCCccchhhhhhhcCCcccCCCCCCHHHHHHH-cCCHHHHHHH
Q 004504          159 LLMGSDLIRPHVAVHSLVT-ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVV-SRQVSVVQLL  236 (748)
Q Consensus       159 ~Ll~~~~~~~~~~~t~L~~-A~~~g~~~~v~~Ll~~gad~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~-~g~~~iv~~L  236 (748)
                             ..+-.+.+++++ |+.+|++|+|++|+++|||+|..+             +.+.+|+++|+. .++.|++++|
T Consensus        66 -------~~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~~-------------n~~~~~l~ya~~~~~~~eivk~L  125 (631)
T PHA02792         66 -------YKNINDFDIFEYLCSDNIDIELLKLLISKGLEINSIK-------------NGINIVEKYATTSNPNVDVFKLL  125 (631)
T ss_pred             -------cCccCCccHHHHHHHhcccHHHHHHHHHcCCCccccc-------------CCCCcceeEeecCCCChHHHHHH
Confidence                   234456677876 566899999999999999999887             458899999965 6999999999


Q ss_pred             HHcCCCCCcccccCCccccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhcccCCCCCCCCchHHHHHHHcCC
Q 004504          237 LQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGC  316 (748)
Q Consensus       237 l~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~L~~A~~~g~  316 (748)
                      +++||++...+..|                                                      .|||+.-+....
T Consensus       126 l~~Gad~~~~~~~g------------------------------------------------------~~~~~~~~~~~~  151 (631)
T PHA02792        126 LDKGIPTCSNIQYG------------------------------------------------------YKIIIEQITRAE  151 (631)
T ss_pred             HHCCCCcccccccC------------------------------------------------------cchhhhhccccc
Confidence            99999987654433                                                      333332221100


Q ss_pred             H-HHHHHHH--hCCCCCCCCccCCCCCCcHHHHHHHcC-------CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--
Q 004504          317 T-GAVAVLL--SCGADAQCPIRTQKTEFHPIHLAARLG-------YSTIVQSLIDSGCDLNTKTESGETALMISAKYK--  384 (748)
Q Consensus       317 ~-~~v~~Ll--~~g~~~~~~~~~~~~~~t~L~~A~~~g-------~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--  384 (748)
                      . +.-..+-  +.|..++   ..+..|.||||+|+..+       +.++++.|+++|++++..|..|.||||+|+.+.  
T Consensus       152 ~~~~~~~~~~~~~~~~i~---~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i  228 (631)
T PHA02792        152 YYNWDDELDDYDYDYTTD---YDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDI  228 (631)
T ss_pred             ccchhhhccccccccccc---cCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccc
Confidence            0 0000000  0011111   12233444444444444       444444444444444444444444444444444  


Q ss_pred             CHHHHHHHHHcCCCCCccccCCCChhhhhhcccc----ccchHHHHHHHHHcCCCCCCC------CC-------------
Q 004504          385 QEECVKVLAKAGADFGLVSVSGQSASSIAGSNWW----SVGFQRAVLDIIRSGNIPKSS------NV-------------  441 (748)
Q Consensus       385 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~----~~~~~~~~~~l~~~~~~~~~~------~~-------------  441 (748)
                      +.|++++|++.--+.    ......|..-.....    ..-...++..|++.+......      +.             
T Consensus       229 ~~ei~~~L~~~~~~~----~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  304 (631)
T PHA02792        229 KREIFDALFDSNYSG----NELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTD  304 (631)
T ss_pred             hHHHHHHHHhccccc----cchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhH
Confidence            444444444420000    000001111100000    011122333333332211000      00             


Q ss_pred             CCCcHHHHHHHcC--CHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHH
Q 004504          442 AVFSPLMFVAQAG--DIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSEL  519 (748)
Q Consensus       442 ~g~t~L~~a~~~~--~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~  519 (748)
                      .-+-.||.-..++  +.+++++|+++| ++..  ......+++.|+..|+.+++++|+++||+++.+|..|.        
T Consensus       305 ~~q~~l~~Yl~~~~v~ieiIK~LId~G-a~~~--r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~--------  373 (631)
T PHA02792        305 SIQDLLSEYVSYHTVYINVIKCMIDEG-ATLY--RFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNII--------  373 (631)
T ss_pred             HHHHHHHHHHhcCCccHHHHHHHHHCC-Cccc--cCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCC--------
Confidence            0011333333333  455555555554 2322  11133345555555555555555555555555544332        


Q ss_pred             cCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCH---HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 004504          520 NQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDL---DAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELL  596 (748)
Q Consensus       520 ~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~L  596 (748)
                                              +.||||.|+.....   +++++|+++|+|+|.+|..|+||||+|+..++.+++++|
T Consensus       374 ------------------------~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelL  429 (631)
T PHA02792        374 ------------------------NIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWL  429 (631)
T ss_pred             ------------------------ChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHH
Confidence                                    24677776665543   568999999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCCCCCcHHHHHHh--cCCCCchhHHHHHHHHHHHHHhCCCCcc
Q 004504          597 ISNGAVCDIKNARGETALSLARK--NSSMKNDAELVILDEVARMLVLGGGHVL  647 (748)
Q Consensus       597 l~~gad~~~~~~~g~t~L~~A~~--~~~~~~~~~~~~~~~~~~~Ll~~ga~~~  647 (748)
                      +++|+|+|.+|..|+|||++|+.  .++....  ...+.+++++|+++|.++.
T Consensus       430 Ls~GADIN~kD~~G~TpL~~A~~~~~~~~~~i--~~~~~~il~lLLs~~p~i~  480 (631)
T PHA02792        430 IDNGADINITTKYGSTCIGICVILAHACIPEI--AELYIKILEIILSKLPTIE  480 (631)
T ss_pred             HHCCCCCCCcCCCCCCHHHHHHHHHhcccHHH--HHHHHHHHHHHHhcCCChh
Confidence            99999999999999999999986  2222111  1234478999999997764

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=100.00  E-value=7.3e-40  Score=316.85  Aligned_cols=221  Identities=28%  Similarity=0.379  Sum_probs=185.8

Q ss_pred             HHHhcCCHHHHHHHHHcCCC------CCcccccChhHHHHHHhCcHHHHHHHHH-cCCCCccchhHHHHHHhcCcHHHHH
Q 004504           86 LAAHSGNVTLVKKLLSTGAD------VNQKLFRGFATTIAVREGHLEILEILLK-AGASQPACEEALLEASCHGQARLAE  158 (748)
Q Consensus        86 ~A~~~g~~~iv~~Ll~~ga~------~~~~~~~g~~l~~A~~~g~~~iv~~Ll~-~ga~~~~~~~~l~~A~~~g~~~~v~  158 (748)
                      -|++.|.+.....|+....+      ++.....++||..||++||.++|++|++ .++++..+-+.          +   
T Consensus        10 naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV----------~---   76 (615)
T KOG0508|consen   10 NAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSV----------R---   76 (615)
T ss_pred             HHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceE----------E---
Confidence            57777777776666654332      2233445689999999999999999999 57776642210          0   


Q ss_pred             HHhcCCCCCCCccccHHHHHhhcCCHHHHHHHHHCCCCCccchhhhhhhcCCcccCCCCCCHHHHHHHcCCHHHHHHHHH
Q 004504          159 LLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQ  238 (748)
Q Consensus       159 ~Ll~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~  238 (748)
                          .+ -....|-+||..|+..||+++||.|+++|++||.+..             ...|||-.||..|+.++||||++
T Consensus        77 ----FD-ge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~-------------TNStPLraACfDG~leivKyLvE  138 (615)
T KOG0508|consen   77 ----FD-GETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTR-------------TNSTPLRAACFDGHLEIVKYLVE  138 (615)
T ss_pred             ----eC-CcccCCCchhhHHhccCcHHHHHHHHHhcCccccccc-------------cCCccHHHHHhcchhHHHHHHHH
Confidence                00 1234578899999999999999999999999999884             37899999999999999999999


Q ss_pred             cCCCCCcccccCCccccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhcccCCCCCCCCchHHHHHHHcCCHH
Q 004504          239 AGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTG  318 (748)
Q Consensus       239 ~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~L~~A~~~g~~~  318 (748)
                      +|+|++..                                                      +..|.|.|++|+..|+.+
T Consensus       139 ~gad~~Ia------------------------------------------------------nrhGhTcLmIa~ykGh~~  164 (615)
T KOG0508|consen  139 HGADPEIA------------------------------------------------------NRHGHTCLMIACYKGHVD  164 (615)
T ss_pred             cCCCCccc------------------------------------------------------ccCCCeeEEeeeccCchH
Confidence            99999976                                                      457889999999999999


Q ss_pred             HHHHHHhCCCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 004504          319 AVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKA  395 (748)
Q Consensus       319 ~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  395 (748)
                      ++++|++.|+|+|   ..+..|.|+||.++..|+++++++|+++|+.++ +|.+|.|||..|...|+.++|++|++.
T Consensus       165 I~qyLle~gADvn---~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~-~d~~GmtPL~~Aa~tG~~~iVe~L~~~  237 (615)
T KOG0508|consen  165 IAQYLLEQGADVN---AKSYKGNTALHDCAESGSVDIVQLLLKHGAKID-VDGHGMTPLLLAAVTGHTDIVERLLQC  237 (615)
T ss_pred             HHHHHHHhCCCcc---hhcccCchHHHhhhhcccHHHHHHHHhCCceee-ecCCCCchHHHHhhhcchHHHHHHhcC
Confidence            9999999999999   466999999999999999999999999999885 567799999999999999999999973

>PHA03100 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.8e-39  Score=355.50  Aligned_cols=284  Identities=24%  Similarity=0.320  Sum_probs=251.8

Q ss_pred             CCHHHHHHHHHCCCCCccchhhhhhhcCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccCCccccCCCcch
Q 004504          182 GFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEE  261 (748)
Q Consensus       182 g~~~~v~~Ll~~gad~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~  261 (748)
                      ...++++++++.+...+..+             ..+.||||.|+..++.++|++|+++|++++..               
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~-------------~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~---------------   64 (480)
T PHA03100         13 IKVKNIKYIIMEDDLNDYSY-------------KKPVLPLYLAKEARNIDVVKILLDNGADINSS---------------   64 (480)
T ss_pred             HHHHHHHHHHhcCccchhhh-------------cccchhhhhhhccCCHHHHHHHHHcCCCCCCc---------------
Confidence            34578888888775444444             34899999999999999999999999998864               


Q ss_pred             hhhhcccCCccccchhhHHHhhhhHHHHHHHhcccCCCCCCCCchHHHH-----HHHcCCHHHHHHHHhCCCCCCCCccC
Q 004504          262 FRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHH-----AILCGCTGAVAVLLSCGADAQCPIRT  336 (748)
Q Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~L~~-----A~~~g~~~~v~~Ll~~g~~~~~~~~~  336 (748)
                                                             +..+.||||.     |+..|+.+++++|+++|++++.   .
T Consensus        65 ---------------------------------------~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~---~  102 (480)
T PHA03100         65 ---------------------------------------TKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNA---P  102 (480)
T ss_pred             ---------------------------------------cccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCC---C
Confidence                                                   4467899999     9999999999999999999874   5


Q ss_pred             CCCCCcHHHHHH--HcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCccccCCCChhhh
Q 004504          337 QKTEFHPIHLAA--RLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYK--QEECVKVLAKAGADFGLVSVSGQSASSI  412 (748)
Q Consensus       337 ~~~~~t~L~~A~--~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~ga~~~~~~~~g~t~l~~  412 (748)
                      +..|.||||+|+  ..|+.+++++|+++|++++..+..|.||||+|+..+  +.+++++|+++|++++.++..|.     
T Consensus       103 d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~-----  177 (480)
T PHA03100        103 DNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGY-----  177 (480)
T ss_pred             CCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCC-----
Confidence            688999999999  999999999999999999999999999999999999  99999999999999887766554     


Q ss_pred             hhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCC------ChHHHHHHH
Q 004504          413 AGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNG------FSAVMVAAS  486 (748)
Q Consensus       413 a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g------~t~L~~A~~  486 (748)
                                                      ||||+|+..|+.+++++|++++ ++++..+..|      .||||.|+.
T Consensus       178 --------------------------------tpL~~A~~~~~~~iv~~Ll~~g-a~~~~~~~~~~~~~~~~t~l~~a~~  224 (480)
T PHA03100        178 --------------------------------TPLHIAVEKGNIDVIKFLLDNG-ADINAGDIETLLFTIFETPLHIAAC  224 (480)
T ss_pred             --------------------------------CHHHHHHHhCCHHHHHHHHHcC-CCccCCCCCCCcHHHHHhHHHHHHH
Confidence                                            5788888888999999999887 6888888888      899999999


Q ss_pred             cCC--HHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHH
Q 004504          487 KGH--VEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLT  564 (748)
Q Consensus       487 ~~~--~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll  564 (748)
                      .++  .+++++|+++|++++.+|..|                                  .||||+|+..|+.+++++|+
T Consensus       225 ~~~~~~~iv~~Ll~~g~din~~d~~g----------------------------------~TpL~~A~~~~~~~iv~~Ll  270 (480)
T PHA03100        225 YNEITLEVVNYLLSYGVPINIKDVYG----------------------------------FTPLHYAVYNNNPEFVKYLL  270 (480)
T ss_pred             hCcCcHHHHHHHHHcCCCCCCCCCCC----------------------------------CCHHHHHHHcCCHHHHHHHH
Confidence            999  999999999999988777644                                  56888888889999999999


Q ss_pred             hCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Q 004504          565 SRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKN  607 (748)
Q Consensus       565 ~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~  607 (748)
                      ++|+|+|.+|..|.||||+|+..++.+++++|+++|++++..+
T Consensus       271 ~~gad~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~~i~  313 (480)
T PHA03100        271 DLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKTII  313 (480)
T ss_pred             HcCCCCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHHHHH
Confidence            9999999999999999999999999999999999999987644

>PHA02878 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.9e-39  Score=351.04  Aligned_cols=300  Identities=18%  Similarity=0.150  Sum_probs=228.0

Q ss_pred             CCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 004504          300 SPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMI  379 (748)
Q Consensus       300 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~  379 (748)
                      ....+.||||.|+..|+.++|++|+++|++++.   .+..|.||||+|+..|+.+++++|++.+.+.+.  ..+.+|++.
T Consensus        33 ~~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~---~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~--~~~~~~l~~  107 (477)
T PHA02878         33 ASLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQ---PDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV--FYTLVAIKD  107 (477)
T ss_pred             ccccCcchHHHHHHcCCHHHHHHHHHCCCCCCC---CCCCCCCHHHHHHHCccHhHHHHHHHHHhcccc--ccchhhHHH
Confidence            445788999999999999999999999999884   568899999999999999999999998765544  567899999


Q ss_pred             HHHcCCHHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHH--HcCCHH
Q 004504          380 SAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVA--QAGDIA  457 (748)
Q Consensus       380 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~--~~~~~~  457 (748)
                      |+..++.+++++|+..+.+.....    ...                                   .+....  .....+
T Consensus       108 a~~~~~~ei~~~Ll~~~~~~~~~~----~~~-----------------------------------~~~~~~~~~~~~~~  148 (477)
T PHA02878        108 AFNNRNVEIFKIILTNRYKNIQTI----DLV-----------------------------------YIDKKSKDDIIEAE  148 (477)
T ss_pred             HHHcCCHHHHHHHHhCcccCcccC----cHH-----------------------------------HHhhccchhhHHHH
Confidence            999999999999998765422110    000                                   000000  011235


Q ss_pred             HHHHHHhcCCCCccccCCC-CChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhh
Q 004504          458 ALKALIGREELNLDYQDDN-GFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALE  536 (748)
Q Consensus       458 ~v~~Ll~~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~  536 (748)
                      ++++|++++ ++++..+.. |.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..++.++++.|+ ..+.+
T Consensus       149 iv~~Ll~~g-adin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll-~~ga~  226 (477)
T PHA02878        149 ITKLLLSYG-ADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILL-ENGAS  226 (477)
T ss_pred             HHHHHHHcC-CCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHH-HcCCC
Confidence            777777765 677777766 777777777777777777777777777777777777777777777777776655 34566


Q ss_pred             cCCCCCCCchHHHHHHhc-CCHHHHHHHHhCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHH
Q 004504          537 KGNRNAGGFYALHCAARR-GDLDAVRLLTSRGYGVNVPDG-DGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETAL  614 (748)
Q Consensus       537 ~~~~~~~g~t~L~~A~~~-~~~~~v~~Ll~~g~d~n~~d~-~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L  614 (748)
                      ++.+|..|+||||+|+.. ++.+++++|+++|+++|.++. .|.||||+|  .++.+++++|+++|||+|.+|..|.|||
T Consensus       227 in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~d~~g~TpL  304 (477)
T PHA02878        227 TDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSLNSYKLTPL  304 (477)
T ss_pred             CCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence            777777888899988875 689999999999999999886 799999999  5678999999999999999999999999


Q ss_pred             HHHHhcCCCCchhHHHHHHHHHHHHH-----hCCCCcccccCCCCCC
Q 004504          615 SLARKNSSMKNDAELVILDEVARMLV-----LGGGHVLKHTKGGKGT  656 (748)
Q Consensus       615 ~~A~~~~~~~~~~~~~~~~~~~~~Ll-----~~ga~~~~~d~~g~t~  656 (748)
                      |+|+..+...         ++.++|+     ..+.+++.++..|..+
T Consensus       305 ~~A~~~~~~~---------~~~~~li~~~~~~~~~~~~~~~~~g~~~  342 (477)
T PHA02878        305 SSAVKQYLCI---------NIGRILISNICLLKRIKPDIKNSEGFID  342 (477)
T ss_pred             HHHHHHcCcc---------chHHHHHHHHHHHHhccCcccCcHHHHH
Confidence            9999853332         2334443     4456777777666543

>PHA02878 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.8e-38  Score=343.34  Aligned_cols=306  Identities=20%  Similarity=0.231  Sum_probs=247.9

Q ss_pred             CCccccHHHHHhhcCCHHHHHHHHHCCCCCccchhhhhhhcCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccc
Q 004504          168 PHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKV  247 (748)
Q Consensus       168 ~~~~~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~  247 (748)
                      ...+.||||.|+..|+.++|++|++.|+++|..+             ..|.||||+||..|+.+++++|++.+.+.+.  
T Consensus        34 ~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d-------------~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~--   98 (477)
T PHA02878         34 SLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPD-------------HRDLTPLHIICKEPNKLGMKEMIRSINKCSV--   98 (477)
T ss_pred             cccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCC-------------CCCCCHHHHHHHCccHhHHHHHHHHHhcccc--
Confidence            3457899999999999999999999999999888             4599999999999999999999998665432  


Q ss_pred             ccCCccccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCC
Q 004504          248 RLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCG  327 (748)
Q Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g  327 (748)
                                                                            ..+.++++.|+..++.+++++|+..+
T Consensus        99 ------------------------------------------------------~~~~~~l~~a~~~~~~ei~~~Ll~~~  124 (477)
T PHA02878         99 ------------------------------------------------------FYTLVAIKDAFNNRNVEIFKIILTNR  124 (477)
T ss_pred             ------------------------------------------------------ccchhhHHHHHHcCCHHHHHHHHhCc
Confidence                                                                  24568999999999999999999886


Q ss_pred             CCCCCCccCCCCCCcHHHHHHHcC--CHHHHHHHHHcCCCCCCCCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCCcccc
Q 004504          328 ADAQCPIRTQKTEFHPIHLAARLG--YSTIVQSLIDSGCDLNTKTES-GETALMISAKYKQEECVKVLAKAGADFGLVSV  404 (748)
Q Consensus       328 ~~~~~~~~~~~~~~t~L~~A~~~g--~~~iv~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~  404 (748)
                      .+....     .....+......+  ..+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++|++++..+.
T Consensus       125 ~~~~~~-----~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~  199 (477)
T PHA02878        125 YKNIQT-----IDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDK  199 (477)
T ss_pred             ccCccc-----CcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCC
Confidence            553311     1111122111222  345999999999999999988 99999999999999999999999998877766


Q ss_pred             CCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCChHHHHH
Q 004504          405 SGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVA  484 (748)
Q Consensus       405 ~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A  484 (748)
                      .|.                                     ||||.|+..++.+++++|++.+ ++++.+|..|.||||+|
T Consensus       200 ~g~-------------------------------------tpLh~A~~~~~~~iv~~Ll~~g-a~in~~d~~g~TpLh~A  241 (477)
T PHA02878        200 TNN-------------------------------------SPLHHAVKHYNKPIVHILLENG-ASTDARDKCGNTPLHIS  241 (477)
T ss_pred             CCC-------------------------------------CHHHHHHHhCCHHHHHHHHHcC-CCCCCCCCCCCCHHHHH
Confidence            554                                     4788888889999999999887 78999999999999999


Q ss_pred             HHc-CCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHH
Q 004504          485 ASK-GHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLL  563 (748)
Q Consensus       485 ~~~-~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L  563 (748)
                      +.. ++.+++++|+++|++++.++.                                 ..|.||||+|  .++.+++++|
T Consensus       242 ~~~~~~~~iv~~Ll~~gadvn~~~~---------------------------------~~g~TpLh~A--~~~~~~v~~L  286 (477)
T PHA02878        242 VGYCKDYDILKLLLEHGVDVNAKSY---------------------------------ILGLTALHSS--IKSERKLKLL  286 (477)
T ss_pred             HHhcCCHHHHHHHHHcCCCCCccCC---------------------------------CCCCCHHHHH--ccCHHHHHHH
Confidence            975 688999999999999887653                                 1355777777  4678899999


Q ss_pred             HhCCCCCCCCCCCCCcHHHHHHHcC-CHHHHHHHHhC-----CCCCCCCCCCCCcHHHHHHhc
Q 004504          564 TSRGYGVNVPDGDGYTPLMLAAREG-HGPMCELLISN-----GAVCDIKNARGETALSLARKN  620 (748)
Q Consensus       564 l~~g~d~n~~d~~g~tpL~~A~~~~-~~~~v~~Ll~~-----gad~~~~~~~g~t~L~~A~~~  620 (748)
                      +++|+|+|..|..|.||||+|+..+ ..+++++|+.+     +.+++.++..|.++-..+...
T Consensus       287 l~~gadin~~d~~g~TpL~~A~~~~~~~~~~~~li~~~~~~~~~~~~~~~~~g~~~n~~~i~~  349 (477)
T PHA02878        287 LEYGADINSLNSYKLTPLSSAVKQYLCINIGRILISNICLLKRIKPDIKNSEGFIDNMDCITS  349 (477)
T ss_pred             HHCCCCCCCcCCCCCCHHHHHHHHcCccchHHHHHHHHHHHHhccCcccCcHHHHHHHHHHhc
Confidence            9999999999999999999999754 56778877764     568888888888876666554

>PHA02989 ankyrin repeat protein; Provisional

Probab=100.00  E-value=3.6e-38  Score=343.31  Aligned_cols=256  Identities=18%  Similarity=0.224  Sum_probs=214.7

Q ss_pred             CCchHHHHHHHc--CCHHHHHHHHhCCCCCCCCccCCCCCCcHHHHHHHcC------CHHHHHHHHHcCCCCCCCCCCCC
Q 004504          303 YGRTLLHHAILC--GCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLG------YSTIVQSLIDSGCDLNTKTESGE  374 (748)
Q Consensus       303 ~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g------~~~iv~~Ll~~g~~~~~~~~~g~  374 (748)
                      .|.|+|+.++..  ++.++|++|+++|++++..    ..+.||||.|+.++      +.+++++|+++|+++|.++..|.
T Consensus        34 ~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~----~~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~  109 (494)
T PHA02989         34 RGNSILLLYLKRKDVKIKIVKLLIDNGADVNYK----GYIETPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGV  109 (494)
T ss_pred             CCCCHHHHHHhcCCCChHHHHHHHHcCCCccCC----CCCCCcHHHHHhccCcchhhHHHHHHHHHHCCCCCCCCCCCCC
Confidence            467888765544  3689999999999998853    24689999888754      46899999999999999999999


Q ss_pred             cHHHHHHHc---CCHHHHHHHHHcCCCC-CccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHH
Q 004504          375 TALMISAKY---KQEECVKVLAKAGADF-GLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFV  450 (748)
Q Consensus       375 t~L~~A~~~---~~~~~v~~Ll~~ga~~-~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a  450 (748)
                      ||||.|+..   ++.+++++|+++|+++ +.++..|.|                                     |||+|
T Consensus       110 tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~t-------------------------------------pLh~a  152 (494)
T PHA02989        110 SPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYN-------------------------------------LLHMY  152 (494)
T ss_pred             cHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCC-------------------------------------HHHHH
Confidence            999988755   5789999999999998 666666655                                     66665


Q ss_pred             HH--cCCHHHHHHHHhcCCCCccc-cCCCCChHHHHHHHcC----CHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC--
Q 004504          451 AQ--AGDIAALKALIGREELNLDY-QDDNGFSAVMVAASKG----HVEVFRELVYAGADVKLLNKSGKTAIMLSELNQ--  521 (748)
Q Consensus       451 ~~--~~~~~~v~~Ll~~~~~~~~~-~~~~g~t~L~~A~~~~----~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~--  521 (748)
                      +.  .++.+++++|+++| ++++. .+..|.||||.|+..+    +.+++++|+++|++++..+..+.|+||.++..+  
T Consensus       153 ~~~~~~~~~iv~~Ll~~G-adi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~  231 (494)
T PHA02989        153 LESFSVKKDVIKILLSFG-VNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKI  231 (494)
T ss_pred             HHhccCCHHHHHHHHHcC-CCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchh
Confidence            54  35789999999987 78887 6788999999988754    899999999999999999999999999876543  


Q ss_pred             ----ChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 004504          522 ----NCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLI  597 (748)
Q Consensus       522 ----~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll  597 (748)
                          ..+++++++ . +.+++.+|..|+||||+|+..|+.+++++|+++|+|+|.+|..|+||||+|+..|+.++++.|+
T Consensus       232 ~~~~~~~il~~l~-~-~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL  309 (494)
T PHA02989        232 LSKKEFKVLNFIL-K-YIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRIL  309 (494)
T ss_pred             hcccchHHHHHHH-h-CCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence                455666544 3 4889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCCCC
Q 004504          598 SNGAV  602 (748)
Q Consensus       598 ~~gad  602 (748)
                      +.+++
T Consensus       310 ~~~p~  314 (494)
T PHA02989        310 QLKPG  314 (494)
T ss_pred             hcCCC
Confidence            98764

>PHA02791 ankyrin-like protein; Provisional

Probab=100.00  E-value=2e-38  Score=311.63  Aligned_cols=235  Identities=19%  Similarity=0.160  Sum_probs=161.7

Q ss_pred             CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHH
Q 004504          351 GYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDII  430 (748)
Q Consensus       351 g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~  430 (748)
                      ++.+++++|+++|+  +..|.+|.||||+|+..|+.+++++|+++|++++..+                           
T Consensus        10 ~~~~~~~~Lis~~a--~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d---------------------------   60 (284)
T PHA02791         10 KSKQLKSFLSSKDA--FKADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE---------------------------   60 (284)
T ss_pred             CHHHHHHHHHhCCC--CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC---------------------------
Confidence            34455555555544  2345555555555555555555555555555443221                           


Q ss_pred             HcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCC
Q 004504          431 RSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSG  510 (748)
Q Consensus       431 ~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g  510 (748)
                                  +.||||+|+..|+.+++++|++.+ ++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|
T Consensus        61 ------------~~TpLh~Aa~~g~~eiV~lLL~~G-advn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g  127 (284)
T PHA02791         61 ------------NEFPLHQAATLEDTKIVKILLFSG-MDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTG  127 (284)
T ss_pred             ------------CCCHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCC
Confidence                        123555555555555555555544 4555566666666677766666777777776666666666665


Q ss_pred             C-cHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcH-HHHHHHcC
Q 004504          511 K-TAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTP-LMLAAREG  588 (748)
Q Consensus       511 ~-t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tp-L~~A~~~~  588 (748)
                      + ||||+|+..++.+++++|+...+...+.  ..|.||||+|++.|+.+++++|+++|+++|.+|..|.|| ||+|+.+|
T Consensus       128 ~~TpL~~Aa~~g~~eivk~LL~~~~~~~d~--~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~  205 (284)
T PHA02791        128 WKTSFYHAVMLNDVSIVSYFLSEIPSTFDL--AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNK  205 (284)
T ss_pred             CcHHHHHHHHcCCHHHHHHHHhcCCccccc--ccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcC
Confidence            3 6677777666666666666543221111  247899999999999999999999999999999999987 99999999


Q ss_pred             CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCc
Q 004504          589 HGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHV  646 (748)
Q Consensus       589 ~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~  646 (748)
                      +.++|++|+++|||+|.+|..| |||.      ..          |++++|+++-++.
T Consensus       206 ~~e~v~lLl~~Ga~in~~~~~~-~~l~------~~----------e~~~~ll~~~~~~  246 (284)
T PHA02791        206 DLEMLQALFKYDINIYSVNLEN-VLLD------DA----------EIAKMIIEKHVEY  246 (284)
T ss_pred             CHHHHHHHHHCCCCCccCcccC-ccCC------CH----------HHHHHHHHhhhhh
Confidence            9999999999999999999954 7662      22          7999999988765

>PHA02989 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.2e-37  Score=339.20  Aligned_cols=278  Identities=20%  Similarity=0.258  Sum_probs=227.8

Q ss_pred             cCCHHHHHHHHhCCCCCCCCccCCCCCCcHHHHHHHc--CCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC------C
Q 004504          314 CGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARL--GYSTIVQSLIDSGCDLNTKTESGETALMISAKYK------Q  385 (748)
Q Consensus       314 ~g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~--g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------~  385 (748)
                      ..+.++|++|+++|++++..    ..|.||||.++..  ++.++|++|+++|+++|.++ .+.||||.|+.++      +
T Consensus        13 ~~~~~~v~~LL~~GadvN~~----~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~tpL~~a~~~~~~~~~~~   87 (494)
T PHA02989         13 TVDKNALEFLLRTGFDVNEE----YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCAVLRNREITSNKI   87 (494)
T ss_pred             cCcHHHHHHHHHcCCCcccc----cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCCCcHHHHHhccCcchhhH
Confidence            35778888888888888742    4577777665443  36788888888888888765 5678888877643      3


Q ss_pred             HHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHH---cCCHHHHHHH
Q 004504          386 EECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQ---AGDIAALKAL  462 (748)
Q Consensus       386 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~---~~~~~~v~~L  462 (748)
                      .+++++|+++|++++.++..|.|                                     |||.|+.   .++.+++++|
T Consensus        88 ~~iv~~Ll~~Gadin~~d~~g~t-------------------------------------pL~~a~~~~~~~~~eiv~~L  130 (494)
T PHA02989         88 KKIVKLLLKFGADINLKTFNGVS-------------------------------------PIVCFIYNSNINNCDMLRFL  130 (494)
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCc-------------------------------------HHHHHHHhcccCcHHHHHHH
Confidence            56777777777777777666655                                     5555544   3789999999


Q ss_pred             HhcCCCCc-cccCCCCChHHHHHHHc--CCHHHHHHHHHCCCCCcc-CCCCCCcHHHHHHHcC----ChhHHHHHHHHHh
Q 004504          463 IGREELNL-DYQDDNGFSAVMVAASK--GHVEVFRELVYAGADVKL-LNKSGKTAIMLSELNQ----NCDLFEKVMLEFA  534 (748)
Q Consensus       463 l~~~~~~~-~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~gad~~~-~~~~g~t~L~~A~~~~----~~~~~~~ll~~~~  534 (748)
                      +++| +++ +.++..|.||||+|+..  ++.+++++|+++|++++. .+..|.||||.|+..+    +.++++.|+.. +
T Consensus       131 l~~G-adin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~-G  208 (494)
T PHA02989        131 LSKG-INVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKK-G  208 (494)
T ss_pred             HHCC-CCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhC-C
Confidence            9997 799 88999999999998864  689999999999999998 6889999999998764    88888877754 6


Q ss_pred             hhcCCCCCCCchHHHHHHhc------CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCC
Q 004504          535 LEKGNRNAGGFYALHCAARR------GDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNA  608 (748)
Q Consensus       535 ~~~~~~~~~g~t~L~~A~~~------~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~  608 (748)
                      .+++..+..|.||||.++..      +..+++++|++ |+++|.+|..|+||||+|+..|+.+++++|+++|||+|.+|.
T Consensus       209 a~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~  287 (494)
T PHA02989        209 VNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-YIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSK  287 (494)
T ss_pred             CCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-CCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCC
Confidence            67888888899999987754      35788887765 699999999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCc
Q 004504          609 RGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHV  646 (748)
Q Consensus       609 ~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~  646 (748)
                      .|+||||+|+..++.          ++++.|++.+...
T Consensus       288 ~G~TpL~~A~~~~~~----------~iv~~LL~~~p~~  315 (494)
T PHA02989        288 DGDTVLTYAIKHGNI----------DMLNRILQLKPGK  315 (494)
T ss_pred             CCCCHHHHHHHcCCH----------HHHHHHHhcCCCh
Confidence            999999999999654          7899999887543

>PHA02791 ankyrin-like protein; Provisional

Probab=100.00  E-value=3.1e-37  Score=303.14  Aligned_cols=238  Identities=18%  Similarity=0.183  Sum_probs=203.3

Q ss_pred             hhhHHHHHHHhcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHc
Q 004504          283 EITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS  362 (748)
Q Consensus       283 ~~~~~i~~~Ll~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~  362 (748)
                      ..+.+++++|++++....+..|.||||+|+..|+.+++++|+++|++++.     ..+.||||+|+..|+.+++++|+++
T Consensus         9 ~~~~~~~~~Lis~~a~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~-----~d~~TpLh~Aa~~g~~eiV~lLL~~   83 (284)
T PHA02791          9 WKSKQLKSFLSSKDAFKADVHGHSALYYAIADNNVRLVCTLLNAGALKNL-----LENEFPLHQAATLEDTKIVKILLFS   83 (284)
T ss_pred             cCHHHHHHHHHhCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcC-----CCCCCHHHHHHHCCCHHHHHHHHHC
Confidence            34568888899888777888899999999999999999999999988764     2468999999999999999999999


Q ss_pred             CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCC
Q 004504          363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVA  442 (748)
Q Consensus       363 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  442 (748)
                      |++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.                                   
T Consensus        84 Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~-----------------------------------  128 (284)
T PHA02791         84 GMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGW-----------------------------------  128 (284)
T ss_pred             CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCC-----------------------------------
Confidence            999999999999999999999999999999999998877665442                                   


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCC
Q 004504          443 VFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQN  522 (748)
Q Consensus       443 g~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~  522 (748)
                       .||||+|+..|+.+++++|+++++...+.  ..|.||||+|+..|+.+++++|+++|++++.++..|.|          
T Consensus       129 -~TpL~~Aa~~g~~eivk~LL~~~~~~~d~--~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t----------  195 (284)
T PHA02791        129 -KTSFYHAVMLNDVSIVSYFLSEIPSTFDL--AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFI----------  195 (284)
T ss_pred             -cHHHHHHHHcCCHHHHHHHHhcCCccccc--ccCccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCC----------
Confidence             25899999999999999999876422221  24789999999999999999999999999887776554          


Q ss_pred             hhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 004504          523 CDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV  602 (748)
Q Consensus       523 ~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad  602 (748)
                                             +|||+|+..|+.+++++|+++|+++|.+|..| |||      ++.|++++||++-++
T Consensus       196 -----------------------~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~~~-~~l------~~~e~~~~ll~~~~~  245 (284)
T PHA02791        196 -----------------------PDIKLAIDNKDLEMLQALFKYDINIYSVNLEN-VLL------DDAEIAKMIIEKHVE  245 (284)
T ss_pred             -----------------------hHHHHHHHcCCHHHHHHHHHCCCCCccCcccC-ccC------CCHHHHHHHHHhhhh
Confidence                                   35999999999999999999999999999854 666      889999999998776


Q ss_pred             C
Q 004504          603 C  603 (748)
Q Consensus       603 ~  603 (748)
                      .
T Consensus       246 ~  246 (284)
T PHA02791        246 Y  246 (284)
T ss_pred             h
Confidence            4

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1e-38  Score=269.72  Aligned_cols=208  Identities=26%  Similarity=0.304  Sum_probs=190.1

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhcCCCCccccCC-CCChHHHHHHHcCCHHHHHHHH-HCCCCCccCCCCCCcHHHHHHHcC
Q 004504          444 FSPLMFVAQAGDIAALKALIGREELNLDYQDD-NGFSAVMVAASKGHVEVFRELV-YAGADVKLLNKSGKTAIMLSELNQ  521 (748)
Q Consensus       444 ~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll-~~gad~~~~~~~g~t~L~~A~~~~  521 (748)
                      .++.+.++......-++.+++..+-.++.++. +|+||||+||..|+.+++.+|+ +.+..+|.+|..|+||||.|+..|
T Consensus         4 ~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g   83 (226)
T KOG4412|consen    4 ASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNG   83 (226)
T ss_pred             cchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcC
Confidence            45777888888888888888887667777776 9999999999999999999999 568888999999999999999999


Q ss_pred             ChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q 004504          522 NCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGA  601 (748)
Q Consensus       522 ~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga  601 (748)
                      +.++++.|+.+.+.+++..+..|.|+||+|+..|.++|+++|+++|+.++.+|..|+||||-|+..|+.+++++|+..||
T Consensus        84 ~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a  163 (226)
T KOG4412|consen   84 NDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGA  163 (226)
T ss_pred             cHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCcccccCCCCCCCchhhh
Q 004504          602 VCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHRKDI  662 (748)
Q Consensus       602 d~~~~~~~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~d~~g~t~l~~a~~  662 (748)
                      .+|.+|+.|+||||.|...+..          +++.+|+++||++...|+.| ||+..+..
T Consensus       164 ~~n~qDk~G~TpL~~al~e~~~----------d~a~lLV~~gAd~~~edke~-t~~~~a~~  213 (226)
T KOG4412|consen  164 PLNTQDKYGFTPLHHALAEGHP----------DVAVLLVRAGADTDREDKEG-TALRIACN  213 (226)
T ss_pred             CCCcccccCccHHHHHHhccCc----------hHHHHHHHhccceeeccccC-chHHHHHH
Confidence            9999999999999999766533          78999999999999999999 99776653

>PHA02798 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.6e-36  Score=329.91  Aligned_cols=275  Identities=17%  Similarity=0.213  Sum_probs=155.5

Q ss_pred             HHHHHHhcccCCCCCCCCchHHHHHHHc--CCHHHHHHHHhCCCCCCCCccCCCCCCcHHHHHHHc-----CCHHHHHHH
Q 004504          287 SILRMLLQHLSYNSPHYGRTLLHHAILC--GCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARL-----GYSTIVQSL  359 (748)
Q Consensus       287 ~i~~~Ll~~~~~~~~~~g~t~L~~A~~~--g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~-----g~~~iv~~L  359 (748)
                      +.++.|++.+.++....+.|+++.+...  ++.++|++|+++|++++.   .+..|.||||.|+.+     ++.+++++|
T Consensus        19 ~~v~~ll~~~~~~~~~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~---~d~~g~TpL~~~~~n~~~~~~~~~iv~~L   95 (489)
T PHA02798         19 STVKLLIKSCNPNEIVNEYSIFQKYLQRDSPSTDIVKLFINLGANVNG---LDNEYSTPLCTILSNIKDYKHMLDIVKIL   95 (489)
T ss_pred             HHHHHHHhcCChhhhcccchHHHHHHhCCCCCHHHHHHHHHCCCCCCC---CCCCCCChHHHHHHhHHhHHhHHHHHHHH
Confidence            4455555544444334444444433322  245555555555555542   234555555555432     345555555


Q ss_pred             HHcCCCCCCCCCCCCcHHHHHHHcC---CHHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCC
Q 004504          360 IDSGCDLNTKTESGETALMISAKYK---QEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIP  436 (748)
Q Consensus       360 l~~g~~~~~~~~~g~t~L~~A~~~~---~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~  436 (748)
                      +++|+++|.+|..|.||||+|+.++   +.+++++|+++|++++                                    
T Consensus        96 l~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn------------------------------------  139 (489)
T PHA02798         96 IENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTT------------------------------------  139 (489)
T ss_pred             HHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCcc------------------------------------
Confidence            5555555555555555555555443   4455555555555554                                    


Q ss_pred             CCCCCCCCcHHHHHHHcCC---HHHHHHHHhcCCCCccccC-CCCChHHHHHHHc----CCHHHHHHHHHCCCCCccCCC
Q 004504          437 KSSNVAVFSPLMFVAQAGD---IAALKALIGREELNLDYQD-DNGFSAVMVAASK----GHVEVFRELVYAGADVKLLNK  508 (748)
Q Consensus       437 ~~~~~~g~t~L~~a~~~~~---~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~----~~~~~v~~Ll~~gad~~~~~~  508 (748)
                       ..+..|.||||+|+..++   .+++++|++.+ ++++..+ ..|.||||.++..    ++.+++++|+++|++++..+.
T Consensus       140 -~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~g-adin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~  217 (489)
T PHA02798        140 -LLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKG-VDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENK  217 (489)
T ss_pred             -ccCCCCCcHHHHHHHcCCcchHHHHHHHHHhC-CCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCc
Confidence             445555668888888887   99999999987 7888875 5788999988764    479999999999999999988


Q ss_pred             CCCcHHHH-------HHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHH
Q 004504          509 SGKTAIML-------SELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPL  581 (748)
Q Consensus       509 ~g~t~L~~-------A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL  581 (748)
                      .|.++++.       +...++.+++..++.  +.+++.+|..|+||||+|+..|+.+++++|+++|+|+|.+|..|+|||
T Consensus       218 ~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~--~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~d~~G~TpL  295 (489)
T PHA02798        218 SHKKKFMEYLNSLLYDNKRFKKNILDFIFS--YIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINIITELGNTCL  295 (489)
T ss_pred             cccchHHHHHHHHHhhcccchHHHHHHHHh--cCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCcccccCCCCCcHH
Confidence            88888762       112223333332221  134444444444444444444444444444444444444444444444


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCCC
Q 004504          582 MLAAREGHGPMCELLISNGAVCD  604 (748)
Q Consensus       582 ~~A~~~~~~~~v~~Ll~~gad~~  604 (748)
                      |+|+..++.++++.|+++|++++
T Consensus       296 ~~A~~~~~~~iv~~lL~~~~~~~  318 (489)
T PHA02798        296 FTAFENESKFIFNSILNKKPNKN  318 (489)
T ss_pred             HHHHHcCcHHHHHHHHccCCCHH
Confidence            44444444444444444444443

>PHA02875 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.7e-36  Score=322.94  Aligned_cols=242  Identities=20%  Similarity=0.245  Sum_probs=158.3

Q ss_pred             chHHHHHHHcCCHHHHHHHHhCCCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcC
Q 004504          305 RTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYK  384 (748)
Q Consensus       305 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~  384 (748)
                      +++|+.|+..|+.+++++|+++|++++.   .+..|.||||+|+..|+.+++++|+++|++++..+..+.||||.|+..|
T Consensus         3 ~~~L~~A~~~g~~~iv~~Ll~~g~~~n~---~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g   79 (413)
T PHA02875          3 QVALCDAILFGELDIARRLLDIGINPNF---EIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEG   79 (413)
T ss_pred             chHHHHHHHhCCHHHHHHHHHCCCCCCc---cCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcccHHHHHHHCC
Confidence            4556666666666666666666665553   2345566666666666666666666666655555555566666666666


Q ss_pred             CHHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 004504          385 QEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIG  464 (748)
Q Consensus       385 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~  464 (748)
                      +.+++++|++.|++.                                                                 
T Consensus        80 ~~~~v~~Ll~~~~~~-----------------------------------------------------------------   94 (413)
T PHA02875         80 DVKAVEELLDLGKFA-----------------------------------------------------------------   94 (413)
T ss_pred             CHHHHHHHHHcCCcc-----------------------------------------------------------------
Confidence            666666666555432                                                                 


Q ss_pred             cCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCC
Q 004504          465 REELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGG  544 (748)
Q Consensus       465 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g  544 (748)
                           .+..+.+|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.++++.|+.. +.+.+..|..|
T Consensus        95 -----~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g  168 (413)
T PHA02875         95 -----DDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDH-KACLDIEDCCG  168 (413)
T ss_pred             -----cccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCC
Confidence                 222333444445555444445555555555554444444445555555544444444444322 23444455567


Q ss_pred             chHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCC-cHHHHHHHcCCHHHHHHHHhCCCCCCCC---CCCCCcHHHHHHhc
Q 004504          545 FYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGY-TPLMLAAREGHGPMCELLISNGAVCDIK---NARGETALSLARKN  620 (748)
Q Consensus       545 ~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~-tpL~~A~~~~~~~~v~~Ll~~gad~~~~---~~~g~t~L~~A~~~  620 (748)
                      +||||+|+..|+.+++++|+++|++++..+..|. ||+|+|+..|+.+++++|+++|+|+|..   +..|.|||++++..
T Consensus       169 ~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~~~~~~~~t~l~~~~~~  248 (413)
T PHA02875        169 CTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGEECTILDMICNM  248 (413)
T ss_pred             CCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchHhhcCCCchHHHHHHHhh
Confidence            7899999999999999999999999999998875 8999999999999999999999999875   67899999998765

>PHA02792 ankyrin-like protein; Provisional

Probab=100.00  E-value=7e-36  Score=314.07  Aligned_cols=402  Identities=12%  Similarity=0.027  Sum_probs=247.4

Q ss_pred             CHHHHHHHcCCHH--HHHHHHHcCCCCCcccccCCccccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhccc
Q 004504          219 SALVAAVVSRQVS--VVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHL  296 (748)
Q Consensus       219 t~L~~A~~~g~~~--iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~  296 (748)
                      .-|.-.|+.-+.+  -.+.|++.|++|-.. ..+.+++....                   .-.......+++-.|+...
T Consensus         5 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~-~~~~t~~~~~~-------------------~~~~~~~~~~~~~~~~~~~   64 (631)
T PHA02792          5 KILYDSCKTFNIDACSAQSLIESGANPLYE-YDGETPLKAYV-------------------TKKNNNIKNDVVILLLSSV   64 (631)
T ss_pred             hHHHhHhhccchhHHHHHHHHHcCCCcccc-cCCCccHHHHH-------------------hhhhhhHHHHHHHHHHhCC
Confidence            3455555544444  368899999998763 22222221110                   0001111123333333332


Q ss_pred             CCCCCCCCchHHH-HHHHcCCHHHHHHHHhCCCCCCCCccCCCCCCcHHHHHHH-cCCHHHHHHHHHcCCCCCCCCCCCC
Q 004504          297 SYNSPHYGRTLLH-HAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAAR-LGYSTIVQSLIDSGCDLNTKTESGE  374 (748)
Q Consensus       297 ~~~~~~~g~t~L~-~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~-~g~~~iv~~Ll~~g~~~~~~~~~g~  374 (748)
                      .. ...+|.+++| .|...|+.|+|++|+++|++++..   +..+.||+++|+. .++.|++++|+++|+++.+.+..|.
T Consensus        65 ~~-~n~~~~~~~~~~~s~n~~lElvk~LI~~GAdvN~~---~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~  140 (631)
T PHA02792         65 DY-KNINDFDIFEYLCSDNIDIELLKLLISKGLEINSI---KNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGY  140 (631)
T ss_pred             Cc-CccCCccHHHHHHHhcccHHHHHHHHHcCCCcccc---cCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCc
Confidence            21 2334555665 455566777777777777777643   3446667777754 4677777777777777766667777


Q ss_pred             cHHHHHHHcCC-HHHHHHHH--HcCCCCCccccCCCChhhhhhccccccc---hHHHHHHHHHcCCCCCCCCCCCCcHHH
Q 004504          375 TALMISAKYKQ-EECVKVLA--KAGADFGLVSVSGQSASSIAGSNWWSVG---FQRAVLDIIRSGNIPKSSNVAVFSPLM  448 (748)
Q Consensus       375 t~L~~A~~~~~-~~~v~~Ll--~~ga~~~~~~~~g~t~l~~a~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~g~t~L~  448 (748)
                      |||+.-+.+.. .+.-..+-  +.|-.++..+..|.||||+++.+....+   ..++++.|+.+|++++..+..|.||||
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~  220 (631)
T PHA02792        141 KIIIEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLY  220 (631)
T ss_pred             chhhhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHH
Confidence            77766553221 11111111  1233455666677777777776653222   367777777777777777777777777


Q ss_pred             HHHHcC--CHHHHHHHHhcCCCCccccCCCCChHHHHHHH--c----C--CHHHHHHHHHCCC--CC----ccCCCC---
Q 004504          449 FVAQAG--DIAALKALIGREELNLDYQDDNGFSAVMVAAS--K----G--HVEVFRELVYAGA--DV----KLLNKS---  509 (748)
Q Consensus       449 ~a~~~~--~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~--~----~--~~~~v~~Ll~~ga--d~----~~~~~~---  509 (748)
                      +|+.+.  +.++++.|++... +.    .+....|.-=.+  .    .  +..+|..|++.+-  ++    +..+..   
T Consensus       221 ~~~~~~~i~~ei~~~L~~~~~-~~----~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~  295 (631)
T PHA02792        221 YYVDKCDIKREIFDALFDSNY-SG----NELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIII  295 (631)
T ss_pred             HHHHcccchHHHHHHHHhccc-cc----cchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHH
Confidence            777777  6777777775421 00    111112221111  1    1  2236677766544  21    000100   


Q ss_pred             ----------CCcHHHHHHHcC--ChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCC
Q 004504          510 ----------GKTAIMLSELNQ--NCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDG  577 (748)
Q Consensus       510 ----------g~t~L~~A~~~~--~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g  577 (748)
                                -+-.||.-..++  +.++++.++..+....   ...+..+++.|+..|+.+++++|+++|+|+|.+|..|
T Consensus       296 ~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~---r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g  372 (631)
T PHA02792        296 SSILKRYTDSIQDLLSEYVSYHTVYINVIKCMIDEGATLY---RFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNI  372 (631)
T ss_pred             HHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHCCCccc---cCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCC
Confidence                      011122222233  4455555555444322   1235568999999999999999999999999999875


Q ss_pred             --CcHHHHHHHcCCH---HHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCcccccCC
Q 004504          578 --YTPLMLAAREGHG---PMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKG  652 (748)
Q Consensus       578 --~tpL~~A~~~~~~---~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~d~~  652 (748)
                        .||||+|+.....   +++++|+++|||+|.+|..|.||||+|+..++.          +++++|+++|++++.+|..
T Consensus       373 ~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~----------eivelLLs~GADIN~kD~~  442 (631)
T PHA02792        373 INIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSV----------SLVEWLIDNGADINITTKY  442 (631)
T ss_pred             CChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCH----------HHHHHHHHCCCCCCCcCCC
Confidence              6999998876654   468999999999999999999999999988654          7999999999999999999


Q ss_pred             CCCCCchhhh
Q 004504          653 GKGTPHRKDI  662 (748)
Q Consensus       653 g~t~l~~a~~  662 (748)
                      |+||+|+|..
T Consensus       443 G~TpL~~A~~  452 (631)
T PHA02792        443 GSTCIGICVI  452 (631)
T ss_pred             CCCHHHHHHH
Confidence            9999999875

>PHA02798 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.3e-35  Score=322.76  Aligned_cols=287  Identities=17%  Similarity=0.146  Sum_probs=217.5

Q ss_pred             CCHHHHHHHHHCCCCCccchhhhhhhcCCcccCCCCCCHHHHHHH--cCCHHHHHHHHHcCCCCCcccccCCccccCCCc
Q 004504          182 GFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVV--SRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTG  259 (748)
Q Consensus       182 g~~~~v~~Ll~~gad~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~--~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~  259 (748)
                      -..+.|+.|++.+. ++...              .+.|+++.+..  .++.++|++|+++|++++..             
T Consensus        16 ~~~~~v~~ll~~~~-~~~~~--------------~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~-------------   67 (489)
T PHA02798         16 VKLSTVKLLIKSCN-PNEIV--------------NEYSIFQKYLQRDSPSTDIVKLFINLGANVNGL-------------   67 (489)
T ss_pred             ccHHHHHHHHhcCC-hhhhc--------------ccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCC-------------
Confidence            45789999998753 33332              26677764443  45899999999999999875             


Q ss_pred             chhhhhcccCCccccchhhHHHhhhhHHHHHHHhcccCCCCCCCCchHHHHHHHc-----CCHHHHHHHHhCCCCCCCCc
Q 004504          260 EEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILC-----GCTGAVAVLLSCGADAQCPI  334 (748)
Q Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~L~~A~~~-----g~~~~v~~Ll~~g~~~~~~~  334 (748)
                                                               +..|.||||.|+..     ++.+++++|+++|++++.  
T Consensus        68 -----------------------------------------d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~--  104 (489)
T PHA02798         68 -----------------------------------------DNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINK--  104 (489)
T ss_pred             -----------------------------------------CCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCC--
Confidence                                                     45788999998864     678999999999999985  


Q ss_pred             cCCCCCCcHHHHHHHcC---CHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC---HHHHHHHHHcCCCCCccc-cCCC
Q 004504          335 RTQKTEFHPIHLAARLG---YSTIVQSLIDSGCDLNTKTESGETALMISAKYKQ---EECVKVLAKAGADFGLVS-VSGQ  407 (748)
Q Consensus       335 ~~~~~~~t~L~~A~~~g---~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~---~~~v~~Ll~~ga~~~~~~-~~g~  407 (748)
                       .+..|.||||+|+..+   +.+++++|+++|++++.+|..|.||||+|+..++   .+++++|+++|++++..+ ..|.
T Consensus       105 -~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~  183 (489)
T PHA02798        105 -KNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKY  183 (489)
T ss_pred             -CCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCC
Confidence             4578999999999986   7899999999999999999999999999999988   999999999999999875 4677


Q ss_pred             ChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHH-------HHHHcCCHHHHHHHHhcCCCCccccCCCCChH
Q 004504          408 SASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLM-------FVAQAGDIAALKALIGREELNLDYQDDNGFSA  480 (748)
Q Consensus       408 t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~-------~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~  480 (748)
                      ||+|.++.........+++++|++.|++++..+..+.++++       .+...++.+++.+|+..  +++|.+|..|.||
T Consensus       184 t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~~--~dvN~~d~~G~TP  261 (489)
T PHA02798        184 DTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFSY--IDINQVDELGFNP  261 (489)
T ss_pred             cHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHhc--CCCCCcCcCCccH
Confidence            87777765544455566666666666666666655555544       12333445555555442  4566666666666


Q ss_pred             HHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHH
Q 004504          481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAV  560 (748)
Q Consensus       481 L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v  560 (748)
                      ||+|+..|+.+++++|+++|+|++.++                                  ..|+||||.|+..++.+++
T Consensus       262 L~~A~~~~~~~~v~~LL~~GAdin~~d----------------------------------~~G~TpL~~A~~~~~~~iv  307 (489)
T PHA02798        262 LYYSVSHNNRKIFEYLLQLGGDINIIT----------------------------------ELGNTCLFTAFENESKFIF  307 (489)
T ss_pred             HHHHHHcCcHHHHHHHHHcCCcccccC----------------------------------CCCCcHHHHHHHcCcHHHH
Confidence            666666666666666666666665554                                  4666799999999999999


Q ss_pred             HHHHhCCCCCCCCCCC
Q 004504          561 RLLTSRGYGVNVPDGD  576 (748)
Q Consensus       561 ~~Ll~~g~d~n~~d~~  576 (748)
                      +.|++++++++..+..
T Consensus       308 ~~lL~~~~~~~~i~~~  323 (489)
T PHA02798        308 NSILNKKPNKNTISYT  323 (489)
T ss_pred             HHHHccCCCHHHHHHH
Confidence            9999999998865443

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=2e-36  Score=255.85  Aligned_cols=208  Identities=29%  Similarity=0.405  Sum_probs=177.2

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCC-CCCCCCC-CCCcHHHHHHHcCCHHHHHHHHHc-CCCCCccccCCCChhhhhhcc
Q 004504          340 EFHPIHLAARLGYSTIVQSLIDSGC-DLNTKTE-SGETALMISAKYKQEECVKVLAKA-GADFGLVSVSGQSASSIAGSN  416 (748)
Q Consensus       340 ~~t~L~~A~~~g~~~iv~~Ll~~g~-~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~a~~~  416 (748)
                      +.++.+.++......-++.|++... +++.++. +|+||||+||..|+.+++++|++. +..                  
T Consensus         3 ~~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~------------------   64 (226)
T KOG4412|consen    3 YASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVK------------------   64 (226)
T ss_pred             ccchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCC------------------
Confidence            3457777787777777888887765 6677666 899999999999999999999852 333                  


Q ss_pred             ccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHH
Q 004504          417 WWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFREL  496 (748)
Q Consensus       417 ~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L  496 (748)
                                         ++..|..||||||.|+..|+.++|+.|+.+.++++|..+..|.|+||+|+..|..+|+++|
T Consensus        65 -------------------~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlL  125 (226)
T KOG4412|consen   65 -------------------PDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLL  125 (226)
T ss_pred             -------------------CCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHH
Confidence                               3444556677888888888889999998887788999999999999999999999999999


Q ss_pred             HHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCC
Q 004504          497 VYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGD  576 (748)
Q Consensus       497 l~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~  576 (748)
                      +++|+.++.+|..|.                                  ||||.|+.-|+++++++|+..|+.+|.+|+.
T Consensus       126 le~ga~i~~kD~~~q----------------------------------tplHRAAavGklkvie~Li~~~a~~n~qDk~  171 (226)
T KOG4412|consen  126 LEKGALIRIKDKQGQ----------------------------------TPLHRAAAVGKLKVIEYLISQGAPLNTQDKY  171 (226)
T ss_pred             HhcCCCCcccccccC----------------------------------chhHHHHhccchhhHHHHHhcCCCCCccccc
Confidence            999988888777554                                  6888888899999999999999999999999


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHh
Q 004504          577 GYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARK  619 (748)
Q Consensus       577 g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~  619 (748)
                      |+||||+|...|+.++..+|+++|||++..|+.| ||+..|+-
T Consensus       172 G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~a~~  213 (226)
T KOG4412|consen  172 GFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-TALRIACN  213 (226)
T ss_pred             CccHHHHHHhccCchHHHHHHHhccceeeccccC-chHHHHHH
Confidence            9999999998999999999999999999999999 99988874

>PHA02875 ankyrin repeat protein; Provisional

Probab=100.00  E-value=9.9e-35  Score=310.89  Aligned_cols=254  Identities=26%  Similarity=0.349  Sum_probs=223.3

Q ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccCCccccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhccc
Q 004504          217 DCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHL  296 (748)
Q Consensus       217 ~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~  296 (748)
                      ..++|+.|+..|+.+++++|+++|++++..                                                  
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~--------------------------------------------------   31 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGINPNFE--------------------------------------------------   31 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCCCcc--------------------------------------------------
Confidence            468999999999999999999999999864                                                  


Q ss_pred             CCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-CCCCCCCc
Q 004504          297 SYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLN-TKTESGET  375 (748)
Q Consensus       297 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~-~~~~~g~t  375 (748)
                          +..|.||||.|+..|+.+++++|+++|++++.   .+..+.||||.|+..|+.+++++|++.|.+++ ..+..|.|
T Consensus        32 ----~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~---~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t  104 (413)
T PHA02875         32 ----IYDGISPIKLAMKFRDSEAIKLLMKHGAIPDV---KYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMT  104 (413)
T ss_pred             ----CCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc---cCCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCCCC
Confidence                44688999999999999999999999998874   34678899999999999999999999998764 45678999


Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q 004504          376 ALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGD  455 (748)
Q Consensus       376 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~  455 (748)
                      |||+|+..++.+++++|+++|++++..+..|.                                     ||||+|+..|+
T Consensus       105 pL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~-------------------------------------tpLh~A~~~~~  147 (413)
T PHA02875        105 PLHLATILKKLDIMKLLIARGADPDIPNTDKF-------------------------------------SPLHLAVMMGD  147 (413)
T ss_pred             HHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCC-------------------------------------CHHHHHHHcCC
Confidence            99999999999999999999999887765554                                     58889999999


Q ss_pred             HHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhh
Q 004504          456 IAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFAL  535 (748)
Q Consensus       456 ~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~  535 (748)
                      .+++++|++++ ++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.                        
T Consensus       148 ~~~v~~Ll~~g-~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~~~~~------------------------  202 (413)
T PHA02875        148 IKGIELLIDHK-ACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGC------------------------  202 (413)
T ss_pred             HHHHHHHHhcC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCCCCCC------------------------
Confidence            99999999987 78999999999999999999999999999999999988776553                        


Q ss_pred             hcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCC---CCCCCcHHHHHHHc---CCHHHHHHHHh
Q 004504          536 EKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVP---DGDGYTPLMLAARE---GHGPMCELLIS  598 (748)
Q Consensus       536 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~---d~~g~tpL~~A~~~---~~~~~v~~Ll~  598 (748)
                               .||+|+|+..|+.+++++|+++|+|+|..   +..+.|||+.++..   ...+.++.|+.
T Consensus       203 ---------~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~li~  262 (413)
T PHA02875        203 ---------VAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGEECTILDMICNMCTNLESEAIDALIA  262 (413)
T ss_pred             ---------chHHHHHHHcCCHHHHHHHHHCCcCcchHhhcCCCchHHHHHHHhhcCCcccHHHHHHHH
Confidence                     37899999999999999999999999865   67889999988753   34566666663

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.98  E-value=9e-32  Score=273.57  Aligned_cols=209  Identities=28%  Similarity=0.382  Sum_probs=140.5

Q ss_pred             CcHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCChhhhhhccccc
Q 004504          341 FHPIHLAARLGYSTIVQSLIDS-GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWS  419 (748)
Q Consensus       341 ~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~  419 (748)
                      ..-+..|++.|..+-|+.|++. |.+++..|.+|.|+||+|+.+++.+++++|+++|+++|......             
T Consensus        45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l-------------  111 (600)
T KOG0509|consen   45 LDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVL-------------  111 (600)
T ss_pred             hhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCC-------------
Confidence            3457778888888888888887 88888888888888888888888888888888888887654211             


Q ss_pred             cchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHC
Q 004504          420 VGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYA  499 (748)
Q Consensus       420 ~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~  499 (748)
                                             +.||||+|+++|+..++..|+++| ++++.+|.+|.+|||.|+..++.-++-+|+.+
T Consensus       112 -----------------------~stPLHWAar~G~~~vv~lLlqhG-Adpt~~D~~G~~~lHla~~~~~~~~vayll~~  167 (600)
T KOG0509|consen  112 -----------------------GSTPLHWAARNGHISVVDLLLQHG-ADPTLKDKQGLTPLHLAAQFGHTALVAYLLSK  167 (600)
T ss_pred             -----------------------CCCcchHHHHcCcHHHHHHHHHcC-CCCceecCCCCcHHHHHHHhCchHHHHHHHHh
Confidence                                   123555555555555555555554 45566666666666666666666666666666


Q ss_pred             CCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCC-CCCC
Q 004504          500 GADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPD-GDGY  578 (748)
Q Consensus       500 gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d-~~g~  578 (748)
                      |+|++.+|.+|+                                  ||||+|+.+|....++.|++-|+.++.+| ..|.
T Consensus       168 ~~d~d~~D~~gr----------------------------------TpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~  213 (600)
T KOG0509|consen  168 GADIDLRDNNGR----------------------------------TPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGN  213 (600)
T ss_pred             cccCCCcCCCCC----------------------------------CHHHHHHHhcccHHHHHHHHhcccccccccccCC
Confidence            666666666555                                  55555666665555666666666666665 6666


Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhc
Q 004504          579 TPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKN  620 (748)
Q Consensus       579 tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~  620 (748)
                      ||||+|+..|+..++++|++.|++.+.+|.+|+||+.+|.+.
T Consensus       214 TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  214 TPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             chHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence            666666666666666655556666666666666666666544

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.97  E-value=3.1e-31  Score=269.70  Aligned_cols=209  Identities=25%  Similarity=0.381  Sum_probs=194.0

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCC-CCCCcHHHHHHHcCC
Q 004504          444 FSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLN-KSGKTAIMLSELNQN  522 (748)
Q Consensus       444 ~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~-~~g~t~L~~A~~~~~  522 (748)
                      ...+..|++.|.++.++.|++..+.+++..|.+|.|+||+|+.+++.+++|+|+++|+|+|... .-+.||||+|+.+|+
T Consensus        45 ~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~  124 (600)
T KOG0509|consen   45 LDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGH  124 (600)
T ss_pred             hhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCc
Confidence            3467889999999999999998568999999999999999999999999999999999999988 678999999999999


Q ss_pred             hhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q 004504          523 CDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV  602 (748)
Q Consensus       523 ~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad  602 (748)
                      ..+++.| .+.+++++.+|..|.||||.|++.|+.-+|-+|+.+|+|+|.+|.+|+||||+|+.+|+...+..||+.|++
T Consensus       125 ~~vv~lL-lqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~  203 (600)
T KOG0509|consen  125 ISVVDLL-LQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGAS  203 (600)
T ss_pred             HHHHHHH-HHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhccc
Confidence            9998654 567889999999999999999999999999999999999999999999999999999998889999999999


Q ss_pred             CCCCC-CCCCcHHHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCcccccCCCCCCCchhhhh
Q 004504          603 CDIKN-ARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHRKDIR  663 (748)
Q Consensus       603 ~~~~~-~~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~d~~g~t~l~~a~~~  663 (748)
                      ++.+| ++|.||||+|+..++.          +++++|++.|++.+..|.+|+||+..|..+
T Consensus       204 ~~~~d~~~g~TpLHwa~~~gN~----------~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  204 LLLTDDNHGNTPLHWAVVGGNL----------TAVKLLLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             ccccccccCCchHHHHHhcCCc----------ceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence            99998 8999999999999887          477788888899999999999999999766

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.96  E-value=1.6e-30  Score=274.10  Aligned_cols=320  Identities=25%  Similarity=0.350  Sum_probs=238.9

Q ss_pred             ccHHHHHhhcCCHHHHHHHHHCCCCCccchhhhhhhcCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccCC
Q 004504          172 VHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGA  251 (748)
Q Consensus       172 ~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~  251 (748)
                      .|+|..||..||.|+|++|+..|+++...++.             |.+||..|+-.||..+|+.|+.+.++++..     
T Consensus       758 ~t~LT~acaggh~e~vellv~rganiehrdkk-------------gf~plImaatagh~tvV~~llk~ha~veaQ-----  819 (2131)
T KOG4369|consen  758 KTNLTSACAGGHREEVELLVVRGANIEHRDKK-------------GFVPLIMAATAGHITVVQDLLKAHADVEAQ-----  819 (2131)
T ss_pred             cccccccccCccHHHHHHHHHhcccccccccc-------------cchhhhhhcccCchHHHHHHHhhhhhhhhh-----
Confidence            56788888889999999999888888888743             888899988888988999988888887765     


Q ss_pred             ccccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCC
Q 004504          252 WSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQ  331 (748)
Q Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~  331 (748)
                                                                      .+..+.|+|.+||..|+.++|++||..|++-.
T Consensus       820 ------------------------------------------------sdrtkdt~lSlacsggr~~vvelLl~~ganke  851 (2131)
T KOG4369|consen  820 ------------------------------------------------SDRTKDTMLSLACSGGRTRVVELLLNAGANKE  851 (2131)
T ss_pred             ------------------------------------------------cccccCceEEEecCCCcchHHHHHHHhhcccc
Confidence                                                            56677888888888888999999998888765


Q ss_pred             CCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCC--CCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCCh
Q 004504          332 CPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTE--SGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSA  409 (748)
Q Consensus       332 ~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~--~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~  409 (748)
                         .++...+|||.+|..-|+.+++..|+.+|+.||.+..  .|.+||+.|..+|+.+.++.|++.|.|+|..-.     
T Consensus       852 ---hrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll~~gsdiNaqIe-----  923 (2131)
T KOG4369|consen  852 ---HRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIE-----  923 (2131)
T ss_pred             ---ccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHhcccchhccccc-----
Confidence               3456677888888888888999999998888887754  578889999888888888888888888776432     


Q ss_pred             hhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCC
Q 004504          410 SSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGH  489 (748)
Q Consensus       410 l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~  489 (748)
                                                     .+..|+|-.|+..|+.+++..||... +++..+-..|.|||+-++..|.
T Consensus       924 -------------------------------TNrnTaltla~fqgr~evv~lLLa~~-anvehRaktgltplme~AsgGy  971 (2131)
T KOG4369|consen  924 -------------------------------TNRNTALTLALFQGRPEVVFLLLAAQ-ANVEHRAKTGLTPLMEMASGGY  971 (2131)
T ss_pred             -------------------------------cccccceeeccccCcchHHHHHHHHh-hhhhhhcccCCcccchhhcCCc
Confidence                                           22346788888889999999999876 6888888999999999999999


Q ss_pred             HHHHHHHHHCCCCCccCC--CCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCC
Q 004504          490 VEVFRELVYAGADVKLLN--KSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRG  567 (748)
Q Consensus       490 ~~~v~~Ll~~gad~~~~~--~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g  567 (748)
                      +|+-++||..|+|+|..-  ....|+|.+++..|+...+..|+ ........+|..|.|+|..|+..|.+..+.+|++++
T Consensus       972 vdvg~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~ll-n~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ 1050 (2131)
T KOG4369|consen  972 VDVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLL-NGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSV 1050 (2131)
T ss_pred             cccchhhhhcccccccCCCCCcCCccceeecCCCchhhhHHhh-CCccceecccCCCCcccchhccCCccccchHHhhcc
Confidence            999999999999987632  23345555555555555554333 223344445555555555555555555555555555


Q ss_pred             CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 004504          568 YGVNVPDGDGYTPLMLAAREGHGPMCELLIS  598 (748)
Q Consensus       568 ~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~  598 (748)
                      +|++..|+...|+++.|.+.|+++||++...
T Consensus      1051 ad~d~qdnr~~S~~maafRKgh~~iVk~mv~ 1081 (2131)
T KOG4369|consen 1051 ADADQQDNRTNSRTMAAFRKGHFAIVKKMVP 1081 (2131)
T ss_pred             cChhhhhcccccccHHHHHhchhheeccccC
Confidence            5555555555555555555555555555544

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.96  E-value=4e-30  Score=271.18  Aligned_cols=324  Identities=23%  Similarity=0.299  Sum_probs=275.1

Q ss_pred             CCchHHHHHHhcCCHHHHHHHHHcCCCCCcccccCh-hHHHHHHhCcHHHHHHHHHcCCCCccchhHHHHHHhcCcHHHH
Q 004504           79 SDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLA  157 (748)
Q Consensus        79 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~-~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~l~~A~~~g~~~~v  157 (748)
                      +-.|+|-.||..||-|+|++|+.+|+++.-+|..|+ ||.+|+-.||..+|+.|+++.++++.                 
T Consensus       756 n~~t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~vea-----------------  818 (2131)
T KOG4369|consen  756 NIKTNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEA-----------------  818 (2131)
T ss_pred             cccccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhh-----------------
Confidence            446899999999999999999999999999999997 89999999999999999999888765                 


Q ss_pred             HHHhcCCCCCCCccccHHHHHhhcCCHHHHHHHHHCCCCCccchhhhhhhcCCcccCCCCCCHHHHHHHcCCHHHHHHHH
Q 004504          158 ELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL  237 (748)
Q Consensus       158 ~~Ll~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll  237 (748)
                              -.+..+.|+|-+||..|..++|++||..|++-..++-             ...|||..|...|..++|+.||
T Consensus       819 --------Qsdrtkdt~lSlacsggr~~vvelLl~~gankehrnv-------------sDytPlsla~Sggy~~iI~~ll  877 (2131)
T KOG4369|consen  819 --------QSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNV-------------SDYTPLSLARSGGYTKIIHALL  877 (2131)
T ss_pred             --------hcccccCceEEEecCCCcchHHHHHHHhhccccccch-------------hhcCchhhhcCcchHHHHHHHh
Confidence                    2455678999999999999999999999988766653             3789999999999999999999


Q ss_pred             HcCCCCCcccccCCccccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhcccCCCCCCCCchHHHHHHHcCCH
Q 004504          238 QAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCT  317 (748)
Q Consensus       238 ~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~L~~A~~~g~~  317 (748)
                      .+|+.++.+.                                                    ...-|.+||+.|..+||.
T Consensus       878 S~GseInSrt----------------------------------------------------gSklgisPLmlatmngh~  905 (2131)
T KOG4369|consen  878 SSGSEINSRT----------------------------------------------------GSKLGISPLMLATMNGHQ  905 (2131)
T ss_pred             hccccccccc----------------------------------------------------ccccCcchhhhhhhcccc
Confidence            9999988662                                                    244677899999999999


Q ss_pred             HHHHHHHhCCCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q 004504          318 GAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGA  397 (748)
Q Consensus       318 ~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga  397 (748)
                      +.++.|++.|.|+|...  ..+-+|+|-+|+..|+.++|.+||.+.+++..+-..|.|||+-++..|..|+=++|+..|+
T Consensus       906 ~at~~ll~~gsdiNaqI--eTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~ga  983 (2131)
T KOG4369|consen  906 AATLSLLQPGSDINAQI--ETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGA  983 (2131)
T ss_pred             HHHHHHhcccchhcccc--ccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhccc
Confidence            99999999999998754  3456679999999999999999999999999899999999999999999999999999999


Q ss_pred             CCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCC
Q 004504          398 DFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNG  477 (748)
Q Consensus       398 ~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g  477 (748)
                      |.+..-.                               ++.    ..|+|..++..|+...+..|+... +.++.++.+|
T Consensus       984 d~nasPv-------------------------------p~T----~dtalti~a~kGh~kfv~~lln~~-atv~v~NkkG 1027 (2131)
T KOG4369|consen  984 DTNASPV-------------------------------PNT----WDTALTIPANKGHTKFVPKLLNGD-ATVRVPNKKG 1027 (2131)
T ss_pred             ccccCCC-------------------------------CCc----CCccceeecCCCchhhhHHhhCCc-cceecccCCC
Confidence            9875321                               111    234677778888888888888654 6788888888


Q ss_pred             ChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHH
Q 004504          478 FSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVM  530 (748)
Q Consensus       478 ~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll  530 (748)
                      +|+|.+|+..|+...+..|+++++|++..|....++++.|.+.|+.++|++..
T Consensus      1028 ~T~Lwla~~Gg~lss~~il~~~~ad~d~qdnr~~S~~maafRKgh~~iVk~mv 1080 (2131)
T KOG4369|consen 1028 CTVLWLASAGGALSSCPILVSSVADADQQDNRTNSRTMAAFRKGHFAIVKKMV 1080 (2131)
T ss_pred             CcccchhccCCccccchHHhhcccChhhhhcccccccHHHHHhchhheecccc
Confidence            88888888888888888888888888888888888888888888888877654

>PHA02795 ankyrin-like protein; Provisional

Probab=99.96  E-value=1.1e-28  Score=250.95  Aligned_cols=200  Identities=15%  Similarity=0.051  Sum_probs=153.5

Q ss_pred             HHHHcCCHHHHHHHHhcCCCCcc------ccCCCCChHHHHHHH--cCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHc
Q 004504          449 FVAQAGDIAALKALIGREELNLD------YQDDNGFSAVMVAAS--KGHVEVFRELVYAGADVKLLNKSGKTAIMLSELN  520 (748)
Q Consensus       449 ~a~~~~~~~~v~~Ll~~~~~~~~------~~~~~g~t~L~~A~~--~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~  520 (748)
                      +|+..+..+++++|+.++ ++++      .++..++|+||.++.  .|+.+++++|+++|||++..  ++.||+|.|+..
T Consensus        83 ~~~~~~~k~~~~~l~s~~-~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~~  159 (437)
T PHA02795         83 LFAYITYKDIISALVSKN-YMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHGAVIYKI--ECLNAYFRGICK  159 (437)
T ss_pred             HHhhcchHHHHHHHHhcc-cccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHc
Confidence            556666677777777665 5655      556667777777777  66777777777777777663  336777777777


Q ss_pred             CChhHHHHHHHHHhhhcCCC-----CCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q 004504          521 QNCDLFEKVMLEFALEKGNR-----NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCEL  595 (748)
Q Consensus       521 ~~~~~~~~ll~~~~~~~~~~-----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~  595 (748)
                      ++.++++.|+..+..+.+..     +..+.|++|.|+..++.+++++|+++|+|+|.+|..|+||||+|+..|+.+++++
T Consensus       160 ~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVel  239 (437)
T PHA02795        160 KESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSW  239 (437)
T ss_pred             CcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHH
Confidence            77777777766654332222     1347789999999999999999999999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCCCCCcHHHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCcccccCCC
Q 004504          596 LISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGG  653 (748)
Q Consensus       596 Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~d~~g  653 (748)
                      |+++|||+|.+|..|.||||+|+..++.....  ....+++++|+++|++++..+..+
T Consensus       240 LL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~--~~~~eIvelLL~~gadI~~~~~~~  295 (437)
T PHA02795        240 LLENGANVNAVMSNGYTCLDVAVDRGSVIARR--ETHLKILEILLREPLSIDCIKLAI  295 (437)
T ss_pred             HHHCCCCCCCcCCCCCCHHHHHHHcCCccccc--ccHHHHHHHHHhCCCCCCchhHHh
Confidence            99999999999999999999999986421000  001279999999999998766544

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.96  E-value=2.1e-28  Score=232.90  Aligned_cols=175  Identities=18%  Similarity=0.202  Sum_probs=157.6

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcC--CHHHHHHHHHCCCCCccCC-CCCCcHHHHH
Q 004504          441 VAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKG--HVEVFRELVYAGADVKLLN-KSGKTAIMLS  517 (748)
Q Consensus       441 ~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~gad~~~~~-~~g~t~L~~A  517 (748)
                      ..+.+||+.|+..|+.+.++.|++.    ++..+..|.||||+|+..+  +.+++++|+++|++++.++ ..|.||||+|
T Consensus        19 ~~~~~pL~~A~~~~~~~~vk~Li~~----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a   94 (209)
T PHA02859         19 YRYCNPLFYYVEKDDIEGVKKWIKF----VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHY   94 (209)
T ss_pred             hccCcHHHHHHHhCcHHHHHHHHHh----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHH
Confidence            3457899999999999999999964    5677899999999999854  8999999999999999997 5899999998


Q ss_pred             HHc---CChhHHHHHHHHHhhhcCCCCCCCchHHHHHHh--cCCHHHHHHHHhCCCCCCCCCCCCCcHHHH-HHHcCCHH
Q 004504          518 ELN---QNCDLFEKVMLEFALEKGNRNAGGFYALHCAAR--RGDLDAVRLLTSRGYGVNVPDGDGYTPLML-AAREGHGP  591 (748)
Q Consensus       518 ~~~---~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~--~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~-A~~~~~~~  591 (748)
                      +..   ++.++++.|+ +.+.+++.+|..|.||||.|+.  .++.+++++|+++|++++.+|..|.||||. |+..++.+
T Consensus        95 ~~~~~~~~~eiv~~Ll-~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~  173 (209)
T PHA02859         95 LSFNKNVEPEILKILI-DSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKK  173 (209)
T ss_pred             HHhCccccHHHHHHHH-HCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHH
Confidence            764   4688887777 5688999999999999999886  468999999999999999999999999996 56788999


Q ss_pred             HHHHHHhCCCCCCCCCCCCCcHHHHHHhc
Q 004504          592 MCELLISNGAVCDIKNARGETALSLARKN  620 (748)
Q Consensus       592 ~v~~Ll~~gad~~~~~~~g~t~L~~A~~~  620 (748)
                      ++++|+++|+|++.+|..|+|||++|..+
T Consensus       174 iv~~Ll~~Gadi~~~d~~g~tpl~la~~~  202 (209)
T PHA02859        174 IFDFLTSLGIDINETNKSGYNCYDLIKFR  202 (209)
T ss_pred             HHHHHHHcCCCCCCCCCCCCCHHHHHhhh
Confidence            99999999999999999999999999876

>PHA02795 ankyrin-like protein; Provisional

Probab=99.96  E-value=1.8e-28  Score=249.35  Aligned_cols=219  Identities=14%  Similarity=0.119  Sum_probs=186.9

Q ss_pred             HHHHHHHcCCCCCcccccChhHHHHHHhCcHHHHHHHHHcCCCCccchhHHHHHHhcCcHHHHHHHhcCCCCCCCccccH
Q 004504           95 LVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHS  174 (748)
Q Consensus        95 iv~~Ll~~ga~~~~~~~~g~~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~t~  174 (748)
                      +-+|++.+|+++|....++    +|+..+..|++++|+++|++++.-.+-+                    .....++|+
T Consensus        64 ~~~~~~~~~~~i~~~~~~~----~~~~~~~k~~~~~l~s~~~~~~~~~~~~--------------------~~~~~~~~~  119 (437)
T PHA02795         64 LYDYFRIHRDNIDQYIVDR----LFAYITYKDIISALVSKNYMEDIFSIII--------------------KNCNSVQDL  119 (437)
T ss_pred             HHHHHHHcCcchhhhhhhh----HHhhcchHHHHHHHHhcccccchhhhhh--------------------hccccccHH
Confidence            4589999999999888777    8899999999999999999987311111                    134457999


Q ss_pred             HHHHhh--cCCHHHHHHHHHCCCCCccchhhhhhhcCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccCCc
Q 004504          175 LVTACC--RGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAW  252 (748)
Q Consensus       175 L~~A~~--~g~~~~v~~Ll~~gad~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~  252 (748)
                      ||.++.  .|+.++|++|+++|||++..+               +.||||.|+..++.+++++|+++|++......   .
T Consensus       120 L~~~~~n~~n~~eiV~~LI~~GADIn~~~---------------~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~---~  181 (437)
T PHA02795        120 LLYYLSNAYVEIDIVDFMVDHGAVIYKIE---------------CLNAYFRGICKKESSVVEFILNCGIPDENDVK---L  181 (437)
T ss_pred             HHHHHHhcCCCHHHHHHHHHCCCCCCCCC---------------CCCHHHHHHHcCcHHHHHHHHhcCCccccccc---c
Confidence            999999  899999999999999999865               68999999999999999999999985432100   0


Q ss_pred             cccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCC
Q 004504          253 SWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQC  332 (748)
Q Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~  332 (748)
                      ++                                             .+..+.+++|.|...++.+++++|+++|++++.
T Consensus       182 ~l---------------------------------------------~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~  216 (437)
T PHA02795        182 DL---------------------------------------------YKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQ  216 (437)
T ss_pred             hh---------------------------------------------hhhhccchhHHHHhcCHHHHHHHHHhCcCCcCc
Confidence            00                                             112466899999999999999999999999984


Q ss_pred             CccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC--------HHHHHHHHHcCCCCCccc
Q 004504          333 PIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQ--------EECVKVLAKAGADFGLVS  403 (748)
Q Consensus       333 ~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~--------~~~v~~Ll~~ga~~~~~~  403 (748)
                         .+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+        .+++++|+++|++++...
T Consensus       217 ---kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~  292 (437)
T PHA02795        217 ---LDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCIK  292 (437)
T ss_pred             ---CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCchh
Confidence               56899999999999999999999999999999999999999999999884        699999999999987654

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.96  E-value=2.7e-28  Score=232.13  Aligned_cols=179  Identities=17%  Similarity=0.115  Sum_probs=156.1

Q ss_pred             CCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcC--ChhHHHHHHHHHhhhcCCCC-CCCchHHHH
Q 004504          474 DDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQ--NCDLFEKVMLEFALEKGNRN-AGGFYALHC  550 (748)
Q Consensus       474 ~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~--~~~~~~~ll~~~~~~~~~~~-~~g~t~L~~  550 (748)
                      .+.+.|||+.|+..|+.++|+.|++.   ++..+..|.||||+|+..+  +.++++.|+.. +.+++..+ ..|+||||+
T Consensus        18 ~~~~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~-gadvn~~~~~~g~TpLh~   93 (209)
T PHA02859         18 FYRYCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIEN-GADVNFKTRDNNLSALHH   93 (209)
T ss_pred             hhccCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHC-CCCCCccCCCCCCCHHHH
Confidence            34568999999999999999999975   5677899999999999865  78999877754 66777776 589999999


Q ss_pred             HHhc---CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH--cCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCCCc
Q 004504          551 AARR---GDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAR--EGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKN  625 (748)
Q Consensus       551 A~~~---~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~--~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~  625 (748)
                      |+..   ++.+++++|+++|+++|.+|..|.||||+|+.  .++.+++++|+++|+|++.+|..|.||||.++...+.. 
T Consensus        94 a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~-  172 (209)
T PHA02859         94 YLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDK-  172 (209)
T ss_pred             HHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCH-
Confidence            8764   47999999999999999999999999999986  46899999999999999999999999999754432332 


Q ss_pred             hhHHHHHHHHHHHHHhCCCCcccccCCCCCCCchhhhhhh
Q 004504          626 DAELVILDEVARMLVLGGGHVLKHTKGGKGTPHRKDIRML  665 (748)
Q Consensus       626 ~~~~~~~~~~~~~Ll~~ga~~~~~d~~g~t~l~~a~~~~~  665 (748)
                              +++++|+++|++++.+|..|+||+|+|..+.+
T Consensus       173 --------~iv~~Ll~~Gadi~~~d~~g~tpl~la~~~~~  204 (209)
T PHA02859        173 --------KIFDFLTSLGIDINETNKSGYNCYDLIKFRNL  204 (209)
T ss_pred             --------HHHHHHHHcCCCCCCCCCCCCCHHHHHhhhhh
Confidence                    79999999999999999999999999987643

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.95  E-value=1.8e-28  Score=214.22  Aligned_cols=164  Identities=29%  Similarity=0.347  Sum_probs=139.9

Q ss_pred             HHHHHHcCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHH
Q 004504          447 LMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLF  526 (748)
Q Consensus       447 L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~  526 (748)
                      +.+++...+.+.+..+.+   ..+|..|+.|.|||++|+..|++++|++|++.|+|++...+..                
T Consensus       133 ~slsVhql~L~~~~~~~~---n~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~r----------------  193 (296)
T KOG0502|consen  133 LSLSVHQLHLDVVDLLVN---NKVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYR----------------  193 (296)
T ss_pred             hhHHHHHHHHHHHHHHhh---ccccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhh----------------
Confidence            333333334444444443   3678899999999999999999999999999999998655433                


Q ss_pred             HHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCC
Q 004504          527 EKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIK  606 (748)
Q Consensus       527 ~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~  606 (748)
                                        .|+|.+|++.|..++|++|++++.|+|..|.+|-|||-||++.++.+||+.||+.|||++..
T Consensus       194 ------------------esALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e  255 (296)
T KOG0502|consen  194 ------------------ESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQE  255 (296)
T ss_pred             ------------------hhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCcccc
Confidence                              36888889999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcHHHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCcccccCCCCCCCc
Q 004504          607 NARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPH  658 (748)
Q Consensus       607 ~~~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~d~~g~t~l~  658 (748)
                      +..|.+++..|...| +          .+++..+++-++.+.+|..-+||+|
T Consensus       256 ~dsGy~~mdlAValG-y----------r~Vqqvie~h~lkl~Q~~~~~~~~~  296 (296)
T KOG0502|consen  256 DDSGYWIMDLAVALG-Y----------RIVQQVIEKHALKLCQDSEKRTPLH  296 (296)
T ss_pred             cccCCcHHHHHHHhh-h----------HHHHHHHHHHHHHHhhcccCCCCCC
Confidence            999999999999984 4          4788888888888889988888886

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.94  E-value=1e-26  Score=203.24  Aligned_cols=279  Identities=23%  Similarity=0.245  Sum_probs=205.0

Q ss_pred             eeccceeecccCcchhhHHHHHHHhcCCHHHHHHhhcCCCCCccccccccccchhhhhhhccCCCcccchhhhcccCCch
Q 004504            3 VFSVRQVVPVDYEAEVSQRLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEVVLREGKPSEVRVEFEEFKSDVT   82 (748)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~l~~A~~~G~~~~v~~ll~~~~~d~n~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~g~t   82 (748)
                      .|..+...|.+-+++-...+.+++.-|-.+--..+......-.|                               ..|.+
T Consensus        16 ~~~v~~~~p~~~ns~q~a~~~~~~~m~~t~p~~~l~~~~s~~~~-------------------------------~lge~   64 (296)
T KOG0502|consen   16 AFAVASALPVTMNSTQIAELFEQVEMGTTEPRCALTAEISALRN-------------------------------ALGES   64 (296)
T ss_pred             chhhhhhCCCCCChHHHHHHHHHhhccccchhHHHHHHHHHHHH-------------------------------hcCCc
Confidence            35566667777777766677777777766655555544321111                               34556


Q ss_pred             HHHHHHhcCCHHHHHHHHHcCCCCC-cccccCh-hHHHHHHhCcHHHHHHHHHcCCCCccchhHHHHHHhcCcHHHHHHH
Q 004504           83 ALFLAAHSGNVTLVKKLLSTGADVN-QKLFRGF-ATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELL  160 (748)
Q Consensus        83 ~L~~A~~~g~~~iv~~Ll~~ga~~~-~~~~~g~-~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~l~~A~~~g~~~~v~~L  160 (748)
                      -+-.|.+.|+.+++..+..-..+-+ ..+..|+ +++.|+-.|+.+.+..++.+|+..+.                    
T Consensus        65 ~~~~~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgne--------------------  124 (296)
T KOG0502|consen   65 LLTVAVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNE--------------------  124 (296)
T ss_pred             ccchhhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCc--------------------
Confidence            6667788888888777766544333 2344566 67888888888888888888877664                    


Q ss_pred             hcCCCCCCCccccHHHHHhhcCCHHHHHHHHHCCCCCccchhhhhhhcCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 004504          161 MGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAG  240 (748)
Q Consensus       161 l~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g  240 (748)
                            .+-.+++|+.+++...+++++..+.++  -+|..|+             .|.|||.+|+..|++++|++||+.|
T Consensus       125 ------vs~~p~s~~slsVhql~L~~~~~~~~n--~VN~~De-------------~GfTpLiWAaa~G~i~vV~fLL~~G  183 (296)
T KOG0502|consen  125 ------VSLMPWSPLSLSVHQLHLDVVDLLVNN--KVNACDE-------------FGFTPLIWAAAKGHIPVVQFLLNSG  183 (296)
T ss_pred             ------cccccCChhhHHHHHHHHHHHHHHhhc--cccCccc-------------cCchHhHHHHhcCchHHHHHHHHcC
Confidence                  334567888888888877777776554  4566663             4888888888888888888888888


Q ss_pred             CCCCcccccCCccccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhcccCCCCCCCCchHHHHHHHcCCHHHH
Q 004504          241 ANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAV  320 (748)
Q Consensus       241 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~L~~A~~~g~~~~v  320 (748)
                      ||++..                                                      ..+..++|..|++.|..++|
T Consensus       184 Adp~~l------------------------------------------------------gk~resALsLAt~ggytdiV  209 (296)
T KOG0502|consen  184 ADPDAL------------------------------------------------------GKYRESALSLATRGGYTDIV  209 (296)
T ss_pred             CChhhh------------------------------------------------------hhhhhhhHhHHhcCChHHHH
Confidence            888765                                                      22455888888888888888


Q ss_pred             HHHHhCCCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Q 004504          321 AVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFG  400 (748)
Q Consensus       321 ~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~  400 (748)
                      ++|++++.|+|.   .+.+|-|||.+|++.|+.++++.|++.|++++..+..|++++..|+..|+. +|+..+++-+...
T Consensus       210 ~lLL~r~vdVNv---yDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~lkl  285 (296)
T KOG0502|consen  210 ELLLTREVDVNV---YDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQEDDSGYWIMDLAVALGYR-IVQQVIEKHALKL  285 (296)
T ss_pred             HHHHhcCCCcce---eccCCCceeeeeecCChHHHHHHHHhcCCCcccccccCCcHHHHHHHhhhH-HHHHHHHHHHHHH
Confidence            888888888884   457888888888888888999999988888888888888898888888877 8888888777766


Q ss_pred             ccccCCCChhh
Q 004504          401 LVSVSGQSASS  411 (748)
Q Consensus       401 ~~~~~g~t~l~  411 (748)
                      .++....+|+|
T Consensus       286 ~Q~~~~~~~~~  296 (296)
T KOG0502|consen  286 CQDSEKRTPLH  296 (296)
T ss_pred             hhcccCCCCCC
Confidence            66666666543

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.93  E-value=4.5e-25  Score=227.18  Aligned_cols=271  Identities=25%  Similarity=0.238  Sum_probs=218.0

Q ss_pred             hHHHHHHHhcCCHHHHHHhhcCCCCCccccccccccchhhhhhhccCCCcccchhhhcccCCchHHHHHHhcCCHHHHHH
Q 004504           19 SQRLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEVVLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVKK   98 (748)
Q Consensus        19 ~~~l~~A~~~G~~~~v~~ll~~~~~d~n~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~   98 (748)
                      .+.+.+|+..||++.|..+|+..+.  . .+-.....+          ..+..   .++.+|.|+||.||.+|+.+++++
T Consensus         4 ~qel~~a~ka~d~~tva~ll~~~~~--r-~~~l~~~tr----------sds~n---~qd~~gfTalhha~Lng~~~is~l   67 (854)
T KOG0507|consen    4 KQELIDACKAGDYDTVALLLSSKKG--R-SGLLFFTTR----------SDSHN---LQDYSGFTLLHHAVLNGQNQISKL   67 (854)
T ss_pred             hhhHHHhhhcccHHHHHHhccCCCC--C-CCCCCCCCC----------Ccccc---ccCccchhHHHHHHhcCchHHHHH
Confidence            4679999999999999999998653  1 110111111          11111   223589999999999999999999


Q ss_pred             HHHcCCCCCcccccCh-hHHHHHHhCcHHHHHHHHHcCCCCccchhHHHHHHhcCcHHHHHHHhcCCCCCCCccccHHHH
Q 004504           99 LLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVT  177 (748)
Q Consensus        99 Ll~~ga~~~~~~~~g~-~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~t~L~~  177 (748)
                      |+++.+-++..+..|. |||+|+..|+.++++.|+.++..++.                          ....|.+|||.
T Consensus        68 lle~ea~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na--------------------------~~~e~~tplhl  121 (854)
T KOG0507|consen   68 LLDYEALLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNA--------------------------VNIENETPLHL  121 (854)
T ss_pred             HhcchhhhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCc--------------------------ccccCcCccch
Confidence            9999999998887775 99999999999999999999866654                          55678999999


Q ss_pred             HhhcCCHHHHHHHHHCCCCCccchhhhhhhcCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccCCccccCC
Q 004504          178 ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTT  257 (748)
Q Consensus       178 A~~~g~~~~v~~Ll~~gad~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~  257 (748)
                      |++.||.+++.+|+++|+|+-..+             +.+.|+|..|++.|..++|+.|+....++....          
T Consensus       122 aaqhgh~dvv~~Ll~~~adp~i~n-------------ns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~----------  178 (854)
T KOG0507|consen  122 AAQHGHLEVVFYLLKKNADPFIRN-------------NSKETVLDLASRFGRAEVVQMLLQKKFPVQSSL----------  178 (854)
T ss_pred             hhhhcchHHHHHHHhcCCCccccC-------------cccccHHHHHHHhhhhHHHHHHhhhccchhhcc----------
Confidence            999999999999999999988777             559999999999999999999998832221110          


Q ss_pred             CcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhcccCCCCCCCCchHHHHHHHcCCHHHHHHHHhCCCCCCCCccCC
Q 004504          258 TGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQ  337 (748)
Q Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~  337 (748)
                                                          .-+...++..+.++||.|+++||.++++.|++.|.++|.    .
T Consensus       179 ------------------------------------~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~----~  218 (854)
T KOG0507|consen  179 ------------------------------------RVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINY----T  218 (854)
T ss_pred             ------------------------------------cCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCccc----c
Confidence                                                111223566788999999999999999999999999984    2


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHc---CCHHHHHHHHH
Q 004504          338 KTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKY---KQEECVKVLAK  394 (748)
Q Consensus       338 ~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~  394 (748)
                      ...-|+||.|+..|..++|++|++.|.+...++.+|+|+|.+-...   ...+++-++..
T Consensus       219 t~~gtalheaalcgk~evvr~ll~~gin~h~~n~~~qtaldil~d~~~~~~~ei~ga~~~  278 (854)
T KOG0507|consen  219 TEDGTALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALDIIIDLQENRRYEIAGAVKN  278 (854)
T ss_pred             cccchhhhhHhhcCcchhhhHHHhhccccccccccchHHHHHHHhcchhhhhhhhhhhhc
Confidence            4556799999999999999999999999999999999999887653   23455555544

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.92  E-value=4.9e-25  Score=226.91  Aligned_cols=218  Identities=26%  Similarity=0.314  Sum_probs=172.3

Q ss_pred             CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCC
Q 004504          365 DLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVF  444 (748)
Q Consensus       365 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~  444 (748)
                      ++|..|.+|.|+||.|+.+|+.+++++|+++.+-++..+..|                                     .
T Consensus        41 s~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg-------------------------------------~   83 (854)
T KOG0507|consen   41 SHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKG-------------------------------------I   83 (854)
T ss_pred             cccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccC-------------------------------------c
Confidence            456667778888888888888888888877766655554433                                     3


Q ss_pred             cHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChh
Q 004504          445 SPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCD  524 (748)
Q Consensus       445 t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~  524 (748)
                      +|||+|++.|+.+++++++.+. ..+|.....|.||||.|+..|+.+++.+|+++|+|+-.++..+.|+|.+|++-|..+
T Consensus        84 ~plhlaaw~g~~e~vkmll~q~-d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~  162 (854)
T KOG0507|consen   84 LPLHLAAWNGNLEIVKMLLLQT-DILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAE  162 (854)
T ss_pred             ceEEehhhcCcchHHHHHHhcc-cCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhH
Confidence            4666667777777777777766 567777777777888888778888888888888777777777778888887777777


Q ss_pred             HHHHHHHHHh-------hhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 004504          525 LFEKVMLEFA-------LEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLI  597 (748)
Q Consensus       525 ~~~~ll~~~~-------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll  597 (748)
                      +++.|+...-       .....++..+.+|||.|+++|+.++++.|++.|.|+|.....| |+||.|+..|..++|.+|+
T Consensus       163 Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll  241 (854)
T KOG0507|consen  163 VVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLL  241 (854)
T ss_pred             HHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHH
Confidence            7777766511       0122345677789999999999999999999999999988776 8999999999999999999


Q ss_pred             hCCCCCCCCCCCCCcHHHHHHhcC
Q 004504          598 SNGAVCDIKNARGETALSLARKNS  621 (748)
Q Consensus       598 ~~gad~~~~~~~g~t~L~~A~~~~  621 (748)
                      +.|.+.+++|.+|+|+|.+-...-
T Consensus       242 ~~gin~h~~n~~~qtaldil~d~~  265 (854)
T KOG0507|consen  242 EIGINTHIKNQHGQTALDIIIDLQ  265 (854)
T ss_pred             hhccccccccccchHHHHHHHhcc
Confidence            999999999999999999998763

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.92  E-value=7.2e-25  Score=250.99  Aligned_cols=264  Identities=20%  Similarity=0.120  Sum_probs=176.7

Q ss_pred             CCchHHHHHHHcCCHHHHHHHHhC--CCCCCCCccCCCCCCcHHH-HHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH
Q 004504          303 YGRTLLHHAILCGCTGAVAVLLSC--GADAQCPIRTQKTEFHPIH-LAARLGYSTIVQSLIDSGCDLNTKTESGETALMI  379 (748)
Q Consensus       303 ~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~~~~~~~~~t~L~-~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~  379 (748)
                      .+...++.|+..|+.+.++.+++.  +.++|.   .+..|.|||| .|+..++.+++++|+++|+    .+..|.||||.
T Consensus        16 ~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~---~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~   88 (743)
T TIGR00870        16 DEEKAFLPAAERGDLASVYRDLEEPKKLNINC---PDRLGRSALFVAAIENENLELTELLLNLSC----RGAVGDTLLHA   88 (743)
T ss_pred             HHHHHHHHHHHcCCHHHHHHHhccccccCCCC---cCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcChHHHHH
Confidence            445666667777777777766666  555542   3456666666 6666666666666666665    44556666666


Q ss_pred             HHHcCCHHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHH
Q 004504          380 SAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAAL  459 (748)
Q Consensus       380 A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v  459 (748)
                      |+. +..+.++.++....+....+                                         .+.            
T Consensus        89 A~~-~~~~~v~~ll~~l~~~~~~~-----------------------------------------~~~------------  114 (743)
T TIGR00870        89 ISL-EYVDAVEAILLHLLAAFRKS-----------------------------------------GPL------------  114 (743)
T ss_pred             HHh-ccHHHHHHHHHHHhhccccc-----------------------------------------Cch------------
Confidence            665 22333333332211100000                                         000            


Q ss_pred             HHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCC
Q 004504          460 KALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGN  539 (748)
Q Consensus       460 ~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~  539 (748)
                       .+..   .........|.||||+|+.+|+.+++++|+++|++++.++.....      .              ......
T Consensus       115 -~~~~---~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~------~--------------~~~~~~  170 (743)
T TIGR00870       115 -ELAN---DQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFF------V--------------KSQGVD  170 (743)
T ss_pred             -hhhc---cccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchh------h--------------cCCCCC
Confidence             0000   011223457999999999999999999999999999865432110      0              000011


Q ss_pred             CCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcC---------CHHHHHHHHhCCCCC-------
Q 004504          540 RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREG---------HGPMCELLISNGAVC-------  603 (748)
Q Consensus       540 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~---------~~~~v~~Ll~~gad~-------  603 (748)
                      ....|.||||.|+..|+.+++++|+++|+|+|.+|..|+||||+|+..+         ...+.+++++.++++       
T Consensus       171 ~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~  250 (743)
T TIGR00870       171 SFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELE  250 (743)
T ss_pred             cccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhh
Confidence            2246889999999999999999999999999999999999999999886         234667777766654       


Q ss_pred             CCCCCCCCcHHHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCcccccCCCCCCCchhh
Q 004504          604 DIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHRKD  661 (748)
Q Consensus       604 ~~~~~~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~d~~g~t~l~~a~  661 (748)
                      ++.|.+|.||||+|+..++.          +++++|++.+...........+|.+.+.
T Consensus       251 ~i~N~~g~TPL~~A~~~g~~----------~l~~lLL~~~~~~kk~~a~~~~~~~~~~  298 (743)
T TIGR00870       251 VILNHQGLTPLKLAAKEGRI----------VLFRLKLAIKYKQKKFVAWPNGQQLLSL  298 (743)
T ss_pred             hhcCCCCCCchhhhhhcCCc----------cHHHHHHHHHHhcceeeccCcchHhHhh
Confidence            67899999999999998765          6999999977666666666666665544

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.92  E-value=8e-24  Score=243.23  Aligned_cols=177  Identities=28%  Similarity=0.323  Sum_probs=162.5

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHH
Q 004504          440 NVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSEL  519 (748)
Q Consensus       440 ~~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~  519 (748)
                      +..+.++|+.|+..|+.++++.|++.+ +++|..|.+|.||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+.
T Consensus       522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~G-~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~  600 (823)
T PLN03192        522 DPNMASNLLTVASTGNAALLEELLKAK-LDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAIS  600 (823)
T ss_pred             CccchhHHHHHHHcCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHH
Confidence            334568999999999999999999987 7999999999999999999999999999999999999999999999999999


Q ss_pred             cCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 004504          520 NQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISN  599 (748)
Q Consensus       520 ~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~  599 (748)
                      .|+.++++.|+.... ..  ....|.++||.|+..|+.+++++|+++|+|+|.+|.+|+||||+|+..|+.+++++|+++
T Consensus       601 ~g~~~iv~~L~~~~~-~~--~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~  677 (823)
T PLN03192        601 AKHHKIFRILYHFAS-IS--DPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMN  677 (823)
T ss_pred             hCCHHHHHHHHhcCc-cc--CcccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHc
Confidence            999999998875432 22  234577999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCC-CcHHHHHHhc
Q 004504          600 GAVCDIKNARG-ETALSLARKN  620 (748)
Q Consensus       600 gad~~~~~~~g-~t~L~~A~~~  620 (748)
                      |||++..|..| .||++++...
T Consensus       678 GAdv~~~~~~g~~t~~~l~~~~  699 (823)
T PLN03192        678 GADVDKANTDDDFSPTELRELL  699 (823)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHH
Confidence            99999999998 9999888654

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.91  E-value=3.4e-23  Score=238.09  Aligned_cols=193  Identities=21%  Similarity=0.222  Sum_probs=169.6

Q ss_pred             CHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHh
Q 004504          455 DIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFA  534 (748)
Q Consensus       455 ~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~  534 (748)
                      +.++-..+.+.+.   ...+.++.++|+.|+..|+.++++.|++.|+|+|..|..|+||||+|+..|+.++++.|+. .+
T Consensus       506 ~l~v~~ll~~~~~---~~~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~-~g  581 (823)
T PLN03192        506 DLNVGDLLGDNGG---EHDDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLK-HA  581 (823)
T ss_pred             cccHHHHHhhccc---ccCCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHh-cC
Confidence            3444444444431   1234456799999999999999999999999999999999999999999999999987776 57


Q ss_pred             hhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHH
Q 004504          535 LEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETAL  614 (748)
Q Consensus       535 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L  614 (748)
                      .+++.+|.+|+||||.|+..|+.+++++|++.++..+.  ..|.+|||.|+.+|+.+++++|+++|+|+|.+|..|+|||
T Consensus       582 adin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpL  659 (823)
T PLN03192        582 CNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATAL  659 (823)
T ss_pred             CCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence            88999999999999999999999999999998876653  4577999999999999999999999999999999999999


Q ss_pred             HHHHhcCCCCchhHHHHHHHHHHHHHhCCCCcccccCCC-CCCCchhhhh
Q 004504          615 SLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGG-KGTPHRKDIR  663 (748)
Q Consensus       615 ~~A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~d~~g-~t~l~~a~~~  663 (748)
                      |+|+..++.          +++++|+++||+++..|..| .||.+.+...
T Consensus       660 h~A~~~g~~----------~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~~  699 (823)
T PLN03192        660 QVAMAEDHV----------DMVRLLIMNGADVDKANTDDDFSPTELRELL  699 (823)
T ss_pred             HHHHHCCcH----------HHHHHHHHcCCCCCCCCCCCCCCHHHHHHHH
Confidence            999999665          79999999999999999998 8998877653

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.90  E-value=3e-23  Score=237.72  Aligned_cols=266  Identities=18%  Similarity=0.131  Sum_probs=200.1

Q ss_pred             cCCchHHHHHHhcCCHHHHHHHHHc--CCCCCcccccCh-hHH-HHHHhCcHHHHHHHHHcCCCCccchhHHHHHHhcC-
Q 004504           78 KSDVTALFLAAHSGNVTLVKKLLST--GADVNQKLFRGF-ATT-IAVREGHLEILEILLKAGASQPACEEALLEASCHG-  152 (748)
Q Consensus        78 ~~g~t~L~~A~~~g~~~iv~~Ll~~--ga~~~~~~~~g~-~l~-~A~~~g~~~iv~~Ll~~ga~~~~~~~~l~~A~~~g-  152 (748)
                      ..+..+|+.||+.|+.+.|+.++++  +.++|..|..|. ||| .|+.+++.+++++|+++|+....+.|+||.|+..+ 
T Consensus        15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~~~~~G~T~Lh~A~~~~~   94 (743)
T TIGR00870        15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSCRGAVGDTLLHAISLEYV   94 (743)
T ss_pred             CHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCCCCCcChHHHHHHHhccH
Confidence            5678999999999999999999999  899998888885 899 99999999999999999986667899999998732 


Q ss_pred             --cHHHHHHHhcCCCC-------------CCCccccHHHHHhhcCCHHHHHHHHHCCCCCccchhhhhhhcCCc-ccCCC
Q 004504          153 --QARLAELLMGSDLI-------------RPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPS-LHTNV  216 (748)
Q Consensus       153 --~~~~v~~Ll~~~~~-------------~~~~~~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~~~~~~~~~-~~~~~  216 (748)
                        ...++.++......             ....|.||||.||.+|+.++|++|+++|++++............. .....
T Consensus        95 ~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~  174 (743)
T TIGR00870        95 DAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYH  174 (743)
T ss_pred             HHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccc
Confidence              23445555443311             124589999999999999999999999999996542110000000 11135


Q ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccCCccccCCCcchhhhhcccCCccccchhhHHHhhhhHHHHHHHhccc
Q 004504          217 DCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHL  296 (748)
Q Consensus       217 ~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~  296 (748)
                      |.|||+.|+..|+.+++++|+++|+|++..                                                  
T Consensus       175 g~tpL~~Aa~~~~~~iv~lLl~~gadin~~--------------------------------------------------  204 (743)
T TIGR00870       175 GESPLNAAACLGSPSIVALLSEDPADILTA--------------------------------------------------  204 (743)
T ss_pred             cccHHHHHHHhCCHHHHHHHhcCCcchhhH--------------------------------------------------
Confidence            889999999999999999999999998865                                                  


Q ss_pred             CCCCCCCCchHHHHHHHcC---------CHHHHHHHHhCCCCCCCC----ccCCCCCCcHHHHHHHcCCHHHHHHHHHcC
Q 004504          297 SYNSPHYGRTLLHHAILCG---------CTGAVAVLLSCGADAQCP----IRTQKTEFHPIHLAARLGYSTIVQSLIDSG  363 (748)
Q Consensus       297 ~~~~~~~g~t~L~~A~~~g---------~~~~v~~Ll~~g~~~~~~----~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g  363 (748)
                          +..|+||||.|+..+         ...+.+++++.+.....+    ...+..|.||||.|+..|+.+++++|++.+
T Consensus       205 ----d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~  280 (743)
T TIGR00870       205 ----DSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIK  280 (743)
T ss_pred             ----hhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHH
Confidence                456889999999987         234566777666554322    234688999999999999999999999966


Q ss_pred             CCCCCCCCCCCcHHHHHHHc--------CCHHHHHHHHHcCC
Q 004504          364 CDLNTKTESGETALMISAKY--------KQEECVKVLAKAGA  397 (748)
Q Consensus       364 ~~~~~~~~~g~t~L~~A~~~--------~~~~~v~~Ll~~ga  397 (748)
                      .+......+...|.+.+...        ....++++++..++
T Consensus       281 ~~~kk~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~  322 (743)
T TIGR00870       281 YKQKKFVAWPNGQQLLSLYWLEELDGWRRKQSVLELIVVFVI  322 (743)
T ss_pred             HhcceeeccCcchHhHhhhccccCCcccccccHHHHHHHHHH
Confidence            55444445556666655432        12245555555543

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.89  E-value=2.3e-23  Score=196.44  Aligned_cols=154  Identities=31%  Similarity=0.427  Sum_probs=134.1

Q ss_pred             CccccCCCCChHHHHHHHcCCHHHHHHHHHCC-CCCccCCCCCCcHHHHHHHc-----CChhHHHHHHHHHhhhcCCCCC
Q 004504          469 NLDYQDDNGFSAVMVAASKGHVEVFRELVYAG-ADVKLLNKSGKTAIMLSELN-----QNCDLFEKVMLEFALEKGNRNA  542 (748)
Q Consensus       469 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-ad~~~~~~~g~t~L~~A~~~-----~~~~~~~~ll~~~~~~~~~~~~  542 (748)
                      -+|..|.+|+|+|||++.++++++|+.||+.| ++++.+++-|.||+++++..     .+.++|..|+..+..+.. -..
T Consensus       260 vVNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaK-AsQ  338 (452)
T KOG0514|consen  260 VVNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAK-ASQ  338 (452)
T ss_pred             HhhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchh-hhh
Confidence            35677899999999999999999999999887 68999999999999988763     356667777655433322 245


Q ss_pred             CCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHhcC
Q 004504          543 GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLIS-NGAVCDIKNARGETALSLARKNS  621 (748)
Q Consensus       543 ~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~-~gad~~~~~~~g~t~L~~A~~~~  621 (748)
                      .|+|+|++|+..|+.++|+.||..|+|||.+|.+|.|+||+|+++||.+||++||. .+.|+...|.+|-|+|.+|...|
T Consensus       339 ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleag  418 (452)
T KOG0514|consen  339 HGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAG  418 (452)
T ss_pred             hcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcC
Confidence            89999999999999999999999999999999999999999999999999999998 57899999999999999999996


Q ss_pred             CC
Q 004504          622 SM  623 (748)
Q Consensus       622 ~~  623 (748)
                      ..
T Consensus       419 h~  420 (452)
T KOG0514|consen  419 HR  420 (452)
T ss_pred             ch
Confidence            54

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.89  E-value=6.4e-23  Score=204.49  Aligned_cols=228  Identities=30%  Similarity=0.411  Sum_probs=180.6

Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCH
Q 004504          307 LLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQE  386 (748)
Q Consensus       307 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~  386 (748)
                      .+.-|+..|..+-++.|+..|++++   ..+.+|.|+||.++...+.+||++|+++|++||..|..|+||||.|+..|+.
T Consensus        43 ~~l~A~~~~d~~ev~~ll~~ga~~~---~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~  119 (527)
T KOG0505|consen   43 VFLEACSRGDLEEVRKLLNRGASPN---LCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYL  119 (527)
T ss_pred             HHHhccccccHHHHHHHhccCCCcc---ccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccH
Confidence            4667888999999999999999886   4679999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 004504          387 ECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGRE  466 (748)
Q Consensus       387 ~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~  466 (748)
                      .++++|+.+|+++...+..|..|+..+...                                     -..+++..-....
T Consensus       120 ~i~~~li~~gA~~~avNsdg~~P~dl~e~e-------------------------------------a~~~~l~~~~~r~  162 (527)
T KOG0505|consen  120 NIVEYLIQHGANLLAVNSDGNMPYDLAEDE-------------------------------------ATLDVLETEMARQ  162 (527)
T ss_pred             HHHHHHHHhhhhhhhccCCCCCccccccCc-------------------------------------chhHHHHHHHHHh
Confidence            999999999999999999998887766322                                     0111111111111


Q ss_pred             CCCccccCCCCChHHHHHHHcC----CHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCC
Q 004504          467 ELNLDYQDDNGFSAVMVAASKG----HVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNA  542 (748)
Q Consensus       467 ~~~~~~~~~~g~t~L~~A~~~~----~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~  542 (748)
                      +++            .-|++.-    ..+=++..+..|.+.+..+.                                  
T Consensus       163 gi~------------iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~----------------------------------  196 (527)
T KOG0505|consen  163 GID------------IEAARKAEEQTMLDDARQWLNAGAELDARHA----------------------------------  196 (527)
T ss_pred             ccc------------HHHHhhhhHHHHHHHHHHHHhcccccccccc----------------------------------
Confidence            111            1111110    11112223335555544433                                  


Q ss_pred             CCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhc
Q 004504          543 GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKN  620 (748)
Q Consensus       543 ~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~  620 (748)
                      .|-|.||.|+.+|..++.++|++.|.+++.+|.+|+||||.|+..|..+++++|+++|++++..+..|.||+.+|...
T Consensus       197 rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~dee  274 (527)
T KOG0505|consen  197 RGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADEE  274 (527)
T ss_pred             ccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhhh
Confidence            466789999999999999999999999999999999999999999999999999999999999999999999999764

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.88  E-value=3.8e-22  Score=182.53  Aligned_cols=145  Identities=19%  Similarity=0.131  Sum_probs=99.7

Q ss_pred             CCCccCCCCCCcHHHHHHHcCChhHHHHH---HHHHhhhcCCCCCCCchHHHHHHhcCCHH---HHHHHHhCCCCCCCCC
Q 004504          501 ADVKLLNKSGKTAIMLSELNQNCDLFEKV---MLEFALEKGNRNAGGFYALHCAARRGDLD---AVRLLTSRGYGVNVPD  574 (748)
Q Consensus       501 ad~~~~~~~g~t~L~~A~~~~~~~~~~~l---l~~~~~~~~~~~~~g~t~L~~A~~~~~~~---~v~~Ll~~g~d~n~~d  574 (748)
                      ++++..+..+.++||.|+..|+.+.+..+   +...+...+..|..|+||||+|+..|+.+   ++++|+++|+++|.+|
T Consensus        11 ~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d   90 (166)
T PHA02743         11 LGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARE   90 (166)
T ss_pred             hHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCC
Confidence            33444444444444444444444222211   11223334444555666777777766544   4788888999999887


Q ss_pred             -CCCCcHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCcccccCC
Q 004504          575 -GDGYTPLMLAAREGHGPMCELLIS-NGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKG  652 (748)
Q Consensus       575 -~~g~tpL~~A~~~~~~~~v~~Ll~-~gad~~~~~~~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~d~~  652 (748)
                       ..|+||||+|+..++.+++++|++ .|++++.+|..|.||||+|+..+..          +++++|+.+|++++.++..
T Consensus        91 ~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~----------~iv~~Ll~~ga~~~~~~~~  160 (166)
T PHA02743         91 LGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDR----------RMMEILRANGAVCDDPLSI  160 (166)
T ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCH----------HHHHHHHHcCCCCCCcccC
Confidence             588999999999999999999985 7899988888999999999887554          6888899999988888877


Q ss_pred             CCC
Q 004504          653 GKG  655 (748)
Q Consensus       653 g~t  655 (748)
                      |..
T Consensus       161 ~~~  163 (166)
T PHA02743        161 GLS  163 (166)
T ss_pred             Ccc
Confidence            653

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.88  E-value=3.6e-22  Score=199.19  Aligned_cols=227  Identities=25%  Similarity=0.316  Sum_probs=186.2

Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCH
Q 004504          377 LMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDI  456 (748)
Q Consensus       377 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~  456 (748)
                      +.-|+..+..+-++.|+..|++++..+.                                     +|.|+||-++...+.
T Consensus        44 ~l~A~~~~d~~ev~~ll~~ga~~~~~n~-------------------------------------DglTalhq~~id~~~   86 (527)
T KOG0505|consen   44 FLEACSRGDLEEVRKLLNRGASPNLCNV-------------------------------------DGLTALHQACIDDNL   86 (527)
T ss_pred             HHhccccccHHHHHHHhccCCCccccCC-------------------------------------ccchhHHHHHhcccH
Confidence            4446667777777777777766655544                                     445688899999999


Q ss_pred             HHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhh
Q 004504          457 AALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALE  536 (748)
Q Consensus       457 ~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~  536 (748)
                      ++|++|++++ +++|..|..|+||||.|+..|+..++++|+++|+++-..+..|..|+.++......+++..-+...+.+
T Consensus        87 e~v~~l~e~g-a~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~  165 (527)
T KOG0505|consen   87 EMVKFLVENG-ANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGID  165 (527)
T ss_pred             HHHHHHHHhc-CCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhccc
Confidence            9999999998 799999999999999999999999999999999999999999999998877666666655444443333


Q ss_pred             cCCCCCCCchHHHHHHhcC----CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCc
Q 004504          537 KGNRNAGGFYALHCAARRG----DLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGET  612 (748)
Q Consensus       537 ~~~~~~~g~t~L~~A~~~~----~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t  612 (748)
                      ++            |++.-    -++=++..+..|.+.+.++..|-|+||.|+.+|..++.++|+++|.+++++|.+|+|
T Consensus       166 ie------------a~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWt  233 (527)
T KOG0505|consen  166 IE------------AARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWT  233 (527)
T ss_pred             HH------------HHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCC
Confidence            21            11111    122233444589999999988999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCcccccCCCCCCCchhhhh
Q 004504          613 ALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHRKDIR  663 (748)
Q Consensus       613 ~L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~d~~g~t~l~~a~~~  663 (748)
                      |||.|+..+..          ++.++|+++|++.+..++.|.||+..+...
T Consensus       234 PlHAAA~Wg~~----------~~~elL~~~ga~~d~~t~~g~~p~dv~dee  274 (527)
T KOG0505|consen  234 PLHAAAHWGQE----------DACELLVEHGADMDAKTKMGETPLDVADEE  274 (527)
T ss_pred             cccHHHHhhhH----------hHHHHHHHhhcccchhhhcCCCCccchhhh
Confidence            99999998654          688999999999999999999999998763

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.87  E-value=2.1e-22  Score=190.00  Aligned_cols=166  Identities=22%  Similarity=0.336  Sum_probs=122.4

Q ss_pred             CCCCCCCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCC
Q 004504          366 LNTKTESGETALMISAKYKQEECVKVLAKAG-ADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVF  444 (748)
Q Consensus       366 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~  444 (748)
                      +|.-|.+|+|+||||+.+.++++|+.||+.| ++++.++..|.||.+++                               
T Consensus       261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLa-------------------------------  309 (452)
T KOG0514|consen  261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLA-------------------------------  309 (452)
T ss_pred             hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHH-------------------------------
Confidence            4678899999999999999999999999987 67888888888877776                               


Q ss_pred             cHHHHHHHcCCHHHHHHHHhcCCCCccccC-CCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCh
Q 004504          445 SPLMFVAQAGDIAALKALIGREELNLDYQD-DNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNC  523 (748)
Q Consensus       445 t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~  523 (748)
                       +|-..-...+.++|..|+..+  ++|.+- ..|+|+||+|+.+|+.++|+.||..|+|+|.+|.+|.|+|++|+.+|+.
T Consensus       310 -ALA~lk~~~d~~vV~~LF~mg--nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhk  386 (452)
T KOG0514|consen  310 -ALAKLKQPADRTVVERLFKMG--DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHK  386 (452)
T ss_pred             -HHHhhcchhhHHHHHHHHhcc--CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChH
Confidence             333333445788999999887  666653 5699999999999999999999999999999998877655555555555


Q ss_pred             hHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHh
Q 004504          524 DLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTS  565 (748)
Q Consensus       524 ~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~  565 (748)
                      ++++.||.....+....|.+|.|+|.+|-..|+.+|.-+|..
T Consensus       387 EivklLLA~p~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa  428 (452)
T KOG0514|consen  387 EIVKLLLAVPSCDISLTDVDGSTALSIALEAGHREIAVMLYA  428 (452)
T ss_pred             HHHHHHhccCcccceeecCCCchhhhhHHhcCchHHHHHHHH
Confidence            555555555555555555555555555555555555444443

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.87  E-value=1.4e-21  Score=178.73  Aligned_cols=145  Identities=19%  Similarity=0.235  Sum_probs=108.5

Q ss_pred             CCccccCCCCChHHHHHHHcCCH----HHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHH--HHHHHHHhhhcCCCC
Q 004504          468 LNLDYQDDNGFSAVMVAASKGHV----EVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLF--EKVMLEFALEKGNRN  541 (748)
Q Consensus       468 ~~~~~~~~~g~t~L~~A~~~~~~----~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~--~~ll~~~~~~~~~~~  541 (748)
                      ++++..+.++.+++|.||+.|+.    +++++|++.|++++..|..|+||||+|+..++.+.+  ..+|...+.+++.++
T Consensus        11 ~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d   90 (166)
T PHA02743         11 LGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARE   90 (166)
T ss_pred             hHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCC
Confidence            34444555566666666666665    445555666666666666666666666666655442  123334455666665


Q ss_pred             -CCCchHHHHHHhcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCc
Q 004504          542 -AGGFYALHCAARRGDLDAVRLLTS-RGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGET  612 (748)
Q Consensus       542 -~~g~t~L~~A~~~~~~~~v~~Ll~-~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t  612 (748)
                       ..|+||||+|+..++.+++++|++ .|++++.+|..|+||||+|+..++.+++++|+++|++++.++..|.+
T Consensus        91 ~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~  163 (166)
T PHA02743         91 LGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIGLS  163 (166)
T ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCCcc
Confidence             468889999999999999999995 79999999999999999999999999999999999999999988754

>PHA02741 hypothetical protein; Provisional

Probab=99.86  E-value=6.2e-21  Score=175.60  Aligned_cols=102  Identities=22%  Similarity=0.259  Sum_probs=85.2

Q ss_pred             hhcCCCCCCCchHHHHHHhcCC----HHHHHHHHhCCCCCCCCCC-CCCcHHHHHHHcCCHHHHHHHHh-CCCCCCCCCC
Q 004504          535 LEKGNRNAGGFYALHCAARRGD----LDAVRLLTSRGYGVNVPDG-DGYTPLMLAAREGHGPMCELLIS-NGAVCDIKNA  608 (748)
Q Consensus       535 ~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~g~d~n~~d~-~g~tpL~~A~~~~~~~~v~~Ll~-~gad~~~~~~  608 (748)
                      .+++.+|..|+||||+|+..|+    .+++++|+++|+++|.++. .|+||||+|+..++.+++++|++ .|++++.+|.
T Consensus        51 a~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~  130 (169)
T PHA02741         51 AALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNA  130 (169)
T ss_pred             hhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCC
Confidence            3445556666777777777777    5889999999999999985 89999999999999999999997 5999999999


Q ss_pred             CCCcHHHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCc
Q 004504          609 RGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHV  646 (748)
Q Consensus       609 ~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~  646 (748)
                      .|+||||+|...+..          +++++|++.++..
T Consensus       131 ~g~tpL~~A~~~~~~----------~iv~~L~~~~~~~  158 (169)
T PHA02741        131 DNKSPFELAIDNEDV----------AMMQILREIVATS  158 (169)
T ss_pred             CCCCHHHHHHHCCCH----------HHHHHHHHHHHHh
Confidence            999999999998654          6888888877553

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.85  E-value=2.5e-20  Score=157.21  Aligned_cols=141  Identities=26%  Similarity=0.417  Sum_probs=123.4

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhH
Q 004504          446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDL  525 (748)
Q Consensus       446 ~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~  525 (748)
                      .+.+|+..+....|+.||+..+-.+|.+|.+|.||||.|+.+|+.+||+.|+..||+++.+..                 
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~-----------------  128 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTN-----------------  128 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccc-----------------
Confidence            567888899999999999888778899999999999999999999999999999998887766                 


Q ss_pred             HHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCC-HHHHHHHHh-CCCCC
Q 004504          526 FEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGH-GPMCELLIS-NGAVC  603 (748)
Q Consensus       526 ~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~-~~~v~~Ll~-~gad~  603 (748)
                                       .||||||.||..++.+++-+||++|+|||+......||||+|+...+ ...+.+|+. .+.++
T Consensus       129 -----------------~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~p  191 (228)
T KOG0512|consen  129 -----------------EGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHP  191 (228)
T ss_pred             -----------------cCccchhhhhcccchhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccCh
Confidence                             45678889999999999999999999999999999999999998665 456666654 68889


Q ss_pred             CCCCCCCCcHHHHHHhc
Q 004504          604 DIKNARGETALSLARKN  620 (748)
Q Consensus       604 ~~~~~~g~t~L~~A~~~  620 (748)
                      ..++..+.||+.+|.+.
T Consensus       192 g~~nn~eeta~~iARRT  208 (228)
T KOG0512|consen  192 GLKNNLEETAFDIARRT  208 (228)
T ss_pred             hhhcCccchHHHHHHHh
Confidence            99999999999999887

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.84  E-value=1.2e-20  Score=159.19  Aligned_cols=139  Identities=20%  Similarity=0.166  Sum_probs=118.8

Q ss_pred             HHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q 004504          516 LSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCEL  595 (748)
Q Consensus       516 ~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~  595 (748)
                      .|+..+....|+.||......++.+|.+|+||||.|+.+|+++||+.|+..|++++++...|+||||-||..++.+++.+
T Consensus        69 waae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~  148 (228)
T KOG0512|consen   69 WAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGR  148 (228)
T ss_pred             HHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHHH
Confidence            45555555666666666666777788889999999999999999999999999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCCCCCCcHHHHHHhcCCCCchhHHHHHHHHHHHH-HhCCCCcccccCCCCCCCchhhhh
Q 004504          596 LISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARML-VLGGGHVLKHTKGGKGTPHRKDIR  663 (748)
Q Consensus       596 Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~L-l~~ga~~~~~d~~g~t~l~~a~~~  663 (748)
                      ||++|||+|+..+...||||+|+.+.+..         ..+++| ...+.++..++..+.||+.+|...
T Consensus       149 LLqhgaDVnA~t~g~ltpLhlaa~~rn~r---------~t~~~Ll~dryi~pg~~nn~eeta~~iARRT  208 (228)
T KOG0512|consen  149 LLQHGADVNAQTKGLLTPLHLAAGNRNSR---------DTLELLLHDRYIHPGLKNNLEETAFDIARRT  208 (228)
T ss_pred             HHhccCcccccccccchhhHHhhcccchH---------HHHHHHhhccccChhhhcCccchHHHHHHHh
Confidence            99999999999999999999999885542         244444 566789999999999999998754

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.84  E-value=1.7e-20  Score=170.38  Aligned_cols=99  Identities=20%  Similarity=0.229  Sum_probs=87.2

Q ss_pred             CCCCCCchHHHHHHhcCCH---HHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCcH
Q 004504          539 NRNAGGFYALHCAARRGDL---DAVRLLTSRGYGVNVPD-GDGYTPLMLAAREGHGPMCELLIS-NGAVCDIKNARGETA  613 (748)
Q Consensus       539 ~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~g~d~n~~d-~~g~tpL~~A~~~~~~~~v~~Ll~-~gad~~~~~~~g~t~  613 (748)
                      ..|..|+||||+|+..|+.   +++++|++.|+++|.+| ..|+||||+|+..++.+++++|++ .|++++.+|..|+||
T Consensus        50 ~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tp  129 (154)
T PHA02736         50 EYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTP  129 (154)
T ss_pred             HhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCH
Confidence            4467888899999988876   46889999999999998 589999999999999999999998 599999999999999


Q ss_pred             HHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCcc
Q 004504          614 LSLARKNSSMKNDAELVILDEVARMLVLGGGHVL  647 (748)
Q Consensus       614 L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~  647 (748)
                      ||+|+..+..          +++++|+.+|++.+
T Consensus       130 L~~A~~~~~~----------~i~~~Ll~~ga~~~  153 (154)
T PHA02736        130 YYVACERHDA----------KMMNILRAKGAQCK  153 (154)
T ss_pred             HHHHHHcCCH----------HHHHHHHHcCCCCC
Confidence            9999988654          79999999998865

>PHA02741 hypothetical protein; Provisional

Probab=99.82  E-value=2.4e-19  Score=165.09  Aligned_cols=130  Identities=25%  Similarity=0.286  Sum_probs=89.0

Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHHhc-----CCCCccccCCCCChHHHHHHHcCC----HHHHHHHHHCCCCCccCCCCC
Q 004504          440 NVAVFSPLMFVAQAGDIAALKALIGR-----EELNLDYQDDNGFSAVMVAASKGH----VEVFRELVYAGADVKLLNKSG  510 (748)
Q Consensus       440 ~~~g~t~L~~a~~~~~~~~v~~Ll~~-----~~~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~gad~~~~~~~g  510 (748)
                      +..|.||||+|++.|+.++++.|+..     .+.+++.+|..|.||||+|+..|+    .+++++|+++|++++      
T Consensus        18 ~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin------   91 (169)
T PHA02741         18 NSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADIN------   91 (169)
T ss_pred             ccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCC------
Confidence            34445555555555555555554321     123445555555555555555554    344555555555544      


Q ss_pred             CcHHHHHHHcCChhHHHHHHHHHhhhcCCCCC-CCchHHHHHHhcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHHcC
Q 004504          511 KTAIMLSELNQNCDLFEKVMLEFALEKGNRNA-GGFYALHCAARRGDLDAVRLLTS-RGYGVNVPDGDGYTPLMLAAREG  588 (748)
Q Consensus       511 ~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~-~g~d~n~~d~~g~tpL~~A~~~~  588 (748)
                                                  .++. .|+||||+|+..++.+++++|++ .|++++.+|..|+||||+|+..+
T Consensus        92 ----------------------------~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~  143 (169)
T PHA02741         92 ----------------------------AQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNE  143 (169)
T ss_pred             ----------------------------CCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCC
Confidence                                        4442 57789999999999999999998 59999999999999999999999


Q ss_pred             CHHHHHHHHhCCCCC
Q 004504          589 HGPMCELLISNGAVC  603 (748)
Q Consensus       589 ~~~~v~~Ll~~gad~  603 (748)
                      +.+++++|+++++..
T Consensus       144 ~~~iv~~L~~~~~~~  158 (169)
T PHA02741        144 DVAMMQILREIVATS  158 (169)
T ss_pred             CHHHHHHHHHHHHHh
Confidence            999999999987653

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.81  E-value=2.8e-19  Score=175.65  Aligned_cols=153  Identities=13%  Similarity=0.120  Sum_probs=108.5

Q ss_pred             cCCCCCh-HHHHHHHcCCHHHHHHHHHCCCCCccCC----CCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCC-CCCCch
Q 004504          473 QDDNGFS-AVMVAASKGHVEVFRELVYAGADVKLLN----KSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR-NAGGFY  546 (748)
Q Consensus       473 ~~~~g~t-~L~~A~~~~~~~~v~~Ll~~gad~~~~~----~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~-~~~g~t  546 (748)
                      +|..+.| +|+.|++.|+.+++++|+++|+|++.++    ..|.||||+|+..++.++++.|+. .+.+++.. +..|.|
T Consensus        28 ~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~-~GADVN~~~~~~g~T  106 (300)
T PHA02884         28 KNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIR-YGADVNRYAEEAKIT  106 (300)
T ss_pred             cCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCcCcccCCCCCC
Confidence            3444443 4555555566777777777777766653    456666666666666666655553 34555553 346778


Q ss_pred             HHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCCCch
Q 004504          547 ALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKND  626 (748)
Q Consensus       547 ~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~  626 (748)
                      |||.|+..++.+++++|+++|++++.+|..|.||||+|++.++.+++.++.  |.   ..+..+.+|++++..   .   
T Consensus       107 pLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~n---~---  175 (300)
T PHA02884        107 PLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMIC--DN---EISNFYKHPKKILIN---F---  175 (300)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc--CC---cccccccChhhhhcc---H---
Confidence            999999999999999999999999999999999999999988888876665  32   246677888887632   1   


Q ss_pred             hHHHHHHHHHHHHHhCCC
Q 004504          627 AELVILDEVARMLVLGGG  644 (748)
Q Consensus       627 ~~~~~~~~~~~~Ll~~ga  644 (748)
                             |++++|+.++.
T Consensus       176 -------ei~~~Lish~v  186 (300)
T PHA02884        176 -------DILKILVSHFI  186 (300)
T ss_pred             -------HHHHHHHHHHH
Confidence                   68888888886

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.81  E-value=1.3e-19  Score=164.64  Aligned_cols=99  Identities=19%  Similarity=0.345  Sum_probs=73.9

Q ss_pred             CCCCCCcHHHHHHHcCChhH---HHHHHHHHhhhcCCCC-CCCchHHHHHHhcCCHHHHHHHHh-CCCCCCCCCCCCCcH
Q 004504          506 LNKSGKTAIMLSELNQNCDL---FEKVMLEFALEKGNRN-AGGFYALHCAARRGDLDAVRLLTS-RGYGVNVPDGDGYTP  580 (748)
Q Consensus       506 ~~~~g~t~L~~A~~~~~~~~---~~~ll~~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll~-~g~d~n~~d~~g~tp  580 (748)
                      .|..|+||||+|+..++.+.   ++ +|...+.+++.++ ..|+||||+|+..++.+++++|++ .|++++.+|..|+||
T Consensus        51 ~d~~g~t~Lh~a~~~~~~~~~e~v~-~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tp  129 (154)
T PHA02736         51 YNRHGKQCVHIVSNPDKADPQEKLK-LLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTP  129 (154)
T ss_pred             hcCCCCEEEEeecccCchhHHHHHH-HHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCH
Confidence            34455555555555544432   22 2223334444554 367789999999999999999998 499999999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCCCC
Q 004504          581 LMLAAREGHGPMCELLISNGAVCDI  605 (748)
Q Consensus       581 L~~A~~~~~~~~v~~Ll~~gad~~~  605 (748)
                      ||+|+..|+.+++++|+++|+++++
T Consensus       130 L~~A~~~~~~~i~~~Ll~~ga~~~~  154 (154)
T PHA02736        130 YYVACERHDAKMMNILRAKGAQCKV  154 (154)
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCC
Confidence            9999999999999999999998763

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.80  E-value=8.8e-20  Score=166.61  Aligned_cols=136  Identities=35%  Similarity=0.433  Sum_probs=120.9

Q ss_pred             HHcCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHH
Q 004504          451 AQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVM  530 (748)
Q Consensus       451 ~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll  530 (748)
                      |+.|+.-.|+..++....|.|.-|..|.+|||+|++.|+..+++.|+..|+.+|..+..                     
T Consensus         8 cregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmg---------------------   66 (448)
T KOG0195|consen    8 CREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMG---------------------   66 (448)
T ss_pred             hhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCC---------------------
Confidence            45555555666666666789999999999999999999999999999999999887652                     


Q ss_pred             HHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCC
Q 004504          531 LEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARG  610 (748)
Q Consensus       531 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g  610 (748)
                                   ..||||+|+..|+.++|+.|+++.+|+|+.+..|+|||||||..|...+++-|+..||.+++.|+.|
T Consensus        67 -------------ddtplhlaaahghrdivqkll~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g  133 (448)
T KOG0195|consen   67 -------------DDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKG  133 (448)
T ss_pred             -------------CCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCC
Confidence                         3478999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHhc
Q 004504          611 ETALSLARKN  620 (748)
Q Consensus       611 ~t~L~~A~~~  620 (748)
                      .|||..|.-.
T Consensus       134 ~tpldkakp~  143 (448)
T KOG0195|consen  134 MTPLDKAKPM  143 (448)
T ss_pred             CCchhhhchH
Confidence            9999988543

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.79  E-value=2.2e-18  Score=169.34  Aligned_cols=156  Identities=18%  Similarity=0.194  Sum_probs=125.1

Q ss_pred             CCCCCch-HHHHHHHcCCHHHHHHHHhCCCCCCCCcc-CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCC-CCCCCcH
Q 004504          300 SPHYGRT-LLHHAILCGCTGAVAVLLSCGADAQCPIR-TQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTK-TESGETA  376 (748)
Q Consensus       300 ~~~~g~t-~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~-~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~-~~~g~t~  376 (748)
                      .+..++| +||.|+..|+.+++++|+++|++++.... .+..|.||||+|+..|+.+++++|+++|+++|.. +..|.||
T Consensus        28 ~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~Tp  107 (300)
T PHA02884         28 KNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITP  107 (300)
T ss_pred             cCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCH
Confidence            4555555 67778888999999999999999986432 2458999999999999999999999999999986 4579999


Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCH
Q 004504          377 LMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDI  456 (748)
Q Consensus       377 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~  456 (748)
                      ||.|+..++.+++++|+++|++++.++..|.|                                     |||.|+..++.
T Consensus       108 Lh~Aa~~~~~eivklLL~~GAdin~kd~~G~T-------------------------------------pL~~A~~~~~~  150 (300)
T PHA02884        108 LYISVLHGCLKCLEILLSYGADINIQTNDMVT-------------------------------------PIELALMICNN  150 (300)
T ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCC-------------------------------------HHHHHHHhCCh
Confidence            99999999999999999999999888776665                                     66666766777


Q ss_pred             HHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCC
Q 004504          457 AALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGA  501 (748)
Q Consensus       457 ~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga  501 (748)
                      +++..+...      ..+..+.+|++++   ++.+++++|+++++
T Consensus       151 ~~~~~~~~~------~~~~~~~~~~~~~---~n~ei~~~Lish~v  186 (300)
T PHA02884        151 FLAFMICDN------EISNFYKHPKKIL---INFDILKILVSHFI  186 (300)
T ss_pred             hHHHHhcCC------cccccccChhhhh---ccHHHHHHHHHHHH
Confidence            766555422      1455667787765   46889999988876

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.78  E-value=1.1e-19  Score=165.90  Aligned_cols=124  Identities=30%  Similarity=0.342  Sum_probs=113.4

Q ss_pred             HHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Q 004504          528 KVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKN  607 (748)
Q Consensus       528 ~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~  607 (748)
                      ..|.....+.|.-|..|.+|||+||+.|+..+++.|+.+|+.+|..+....||||+|+..|+-++|+.|++..+|+|++|
T Consensus        18 lwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavn   97 (448)
T KOG0195|consen   18 LWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVN   97 (448)
T ss_pred             EEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhh
Confidence            33444455677788899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCcccccCCCCCCCchhh
Q 004504          608 ARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHRKD  661 (748)
Q Consensus       608 ~~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~d~~g~t~l~~a~  661 (748)
                      ..|+|||||||..| +         +.+++-|+..||.++..+++|.||+..|.
T Consensus        98 ehgntplhyacfwg-y---------dqiaedli~~ga~v~icnk~g~tpldkak  141 (448)
T KOG0195|consen   98 EHGNTPLHYACFWG-Y---------DQIAEDLISCGAAVNICNKKGMTPLDKAK  141 (448)
T ss_pred             ccCCCchhhhhhhc-H---------HHHHHHHHhccceeeecccCCCCchhhhc
Confidence            99999999999884 4         37899999999999999999999998764

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.74  E-value=1.2e-17  Score=136.02  Aligned_cols=89  Identities=34%  Similarity=0.565  Sum_probs=71.9

Q ss_pred             HHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCCCchh
Q 004504          548 LHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDA  627 (748)
Q Consensus       548 L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~  627 (748)
                      ||+|++.|+.+++++|++.+.+++.    |+||||+|+.+|+.+++++|+++|++++.+|..|+||||+|+.++..    
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~----   72 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNL----   72 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHH----
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCH----
Confidence            6888888888888888888877776    78888888888888888888888888888888888888888887554    


Q ss_pred             HHHHHHHHHHHHHhCCCCccccc
Q 004504          628 ELVILDEVARMLVLGGGHVLKHT  650 (748)
Q Consensus       628 ~~~~~~~~~~~Ll~~ga~~~~~d  650 (748)
                            +++++|+++|++++.+|
T Consensus        73 ------~~~~~Ll~~g~~~~~~n   89 (89)
T PF12796_consen   73 ------EIVKLLLEHGADVNIRN   89 (89)
T ss_dssp             ------HHHHHHHHTTT-TTSS-
T ss_pred             ------HHHHHHHHcCCCCCCcC
Confidence                  68888888888887765

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.72  E-value=2.3e-17  Score=173.52  Aligned_cols=179  Identities=24%  Similarity=0.200  Sum_probs=133.2

Q ss_pred             CCcHHHHHHH---cCCHHHHHHHHhcCCCCcccc----CCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHH
Q 004504          443 VFSPLMFVAQ---AGDIAALKALIGREELNLDYQ----DDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIM  515 (748)
Q Consensus       443 g~t~L~~a~~---~~~~~~v~~Ll~~~~~~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~  515 (748)
                      |.|.||.|.-   .++.++++.|++..+--+|..    ...|.||||+|+.+.+.++|++|++.|||++.+-. |.  +.
T Consensus       143 GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~-G~--FF  219 (782)
T KOG3676|consen  143 GETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARAC-GA--FF  219 (782)
T ss_pred             hhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhh-cc--cc
Confidence            3444554443   344577777777654333322    34699999999999999999999999999986532 10  00


Q ss_pred             HHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHH
Q 004504          516 LSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCEL  595 (748)
Q Consensus       516 ~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~  595 (748)
                      .+-..+...        ...+..-.-..|..||-+||..++.+++++|+++|||+|++|..|+|.||..+..-..++-++
T Consensus       220 ~~~dqk~~r--------k~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~  291 (782)
T KOG3676|consen  220 CPDDQKASR--------KSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDL  291 (782)
T ss_pred             Ccccccccc--------cccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHH
Confidence            000000000        000001112578899999999999999999999999999999999999999999999999999


Q ss_pred             HHhCCCC--CCCCCCCCCcHHHHHHhcCCCCchhHHHHHHHHHHHHHhC
Q 004504          596 LISNGAV--CDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLG  642 (748)
Q Consensus       596 Ll~~gad--~~~~~~~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~  642 (748)
                      ++++|++  ..++|+.|.|||.+|++-|..          ++.+.+++.
T Consensus       292 ~L~~ga~~l~~v~N~qgLTPLtLAaklGk~----------emf~~ile~  330 (782)
T KOG3676|consen  292 ALELGANALEHVRNNQGLTPLTLAAKLGKK----------EMFQHILER  330 (782)
T ss_pred             HHhcCCCccccccccCCCChHHHHHHhhhH----------HHHHHHHHh
Confidence            9999999  899999999999999998654          677777766

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.72  E-value=5.7e-17  Score=132.06  Aligned_cols=89  Identities=39%  Similarity=0.630  Sum_probs=76.6

Q ss_pred             HHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHH
Q 004504          481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAV  560 (748)
Q Consensus       481 L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v  560 (748)
                      ||+|++.|+.+++++|++.+.+++.                                      |+||||+|+..|+.+++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~--------------------------------------~~~~l~~A~~~~~~~~~   42 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL--------------------------------------GNTALHYAAENGNLEIV   42 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS--------------------------------------SSBHHHHHHHTTTHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC--------------------------------------CCCHHHHHHHcCCHHHH
Confidence            6777888888888888877766653                                      44699999999999999


Q ss_pred             HHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Q 004504          561 RLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKN  607 (748)
Q Consensus       561 ~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~  607 (748)
                      ++|+++|++++.+|..|+||||+|+.+|+.+++++|+++|++++.+|
T Consensus        43 ~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~n   89 (89)
T PF12796_consen   43 KLLLENGADINSQDKNGNTALHYAAENGNLEIVKLLLEHGADVNIRN   89 (89)
T ss_dssp             HHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHTTT-TTSS-
T ss_pred             HHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence            99999999999999999999999999999999999999999999875

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.67  E-value=1.7e-15  Score=159.67  Aligned_cols=209  Identities=20%  Similarity=0.184  Sum_probs=158.4

Q ss_pred             hHHHHHHHcCCHHHHHHHHhCC---------CCCCCCccCCCCCCcHHHHHHHc---CCHHHHHHHHHcCCC-CC----C
Q 004504          306 TLLHHAILCGCTGAVAVLLSCG---------ADAQCPIRTQKTEFHPIHLAARL---GYSTIVQSLIDSGCD-LN----T  368 (748)
Q Consensus       306 t~L~~A~~~g~~~~v~~Ll~~g---------~~~~~~~~~~~~~~t~L~~A~~~---g~~~iv~~Ll~~g~~-~~----~  368 (748)
                      .++..|...+..+....++..+         .+++   .+...|.|.||.|.-+   ++.++++.|++.-.. +|    .
T Consensus       103 ~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~---~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~  179 (782)
T KOG3676|consen  103 DALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLN---ERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTS  179 (782)
T ss_pred             hhhhhccccccHHHHhccchhhhhhhhhhhhhccc---cccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhh
Confidence            6778888888888877777655         2333   3457899999999874   456899999985322 11    1


Q ss_pred             CCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHH
Q 004504          369 KTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLM  448 (748)
Q Consensus       369 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~  448 (748)
                      ....|.||||+|+.+.+.++|++|++.|||++.+-.-.          +.....+....    ...+-.-.-..|..||.
T Consensus       180 eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~----------FF~~~dqk~~r----k~T~Y~G~~YfGEyPLS  245 (782)
T KOG3676|consen  180 EEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGA----------FFCPDDQKASR----KSTNYTGYFYFGEYPLS  245 (782)
T ss_pred             HhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhcc----------ccCcccccccc----cccCCcceeeeccCchH
Confidence            23469999999999999999999999999998653110          00000000000    00001111235678999


Q ss_pred             HHHHcCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCC--CccCCCCCCcHHHHHHHcCChhHH
Q 004504          449 FVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGAD--VKLLNKSGKTAIMLSELNQNCDLF  526 (748)
Q Consensus       449 ~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad--~~~~~~~g~t~L~~A~~~~~~~~~  526 (748)
                      +|+-.++.+++++|++++ +|++.+|+.|+|.||..+..-..++..+++++|++  ...+|..|-|||.+|+.-|+.+++
T Consensus       246 fAAC~nq~eivrlLl~~g-Ad~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf  324 (782)
T KOG3676|consen  246 FAACTNQPEIVRLLLAHG-ADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMF  324 (782)
T ss_pred             HHHHcCCHHHHHHHHhcC-CCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHH
Confidence            999999999999999976 89999999999999999999899999999999999  888999999999999999999999


Q ss_pred             HHHHHH
Q 004504          527 EKVMLE  532 (748)
Q Consensus       527 ~~ll~~  532 (748)
                      +.+++.
T Consensus       325 ~~ile~  330 (782)
T KOG3676|consen  325 QHILER  330 (782)
T ss_pred             HHHHHh
Confidence            999987

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.64  E-value=3.4e-15  Score=131.10  Aligned_cols=123  Identities=39%  Similarity=0.595  Sum_probs=69.1

Q ss_pred             cCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHH
Q 004504          473 QDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAA  552 (748)
Q Consensus       473 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~  552 (748)
                      .+.+|.|||++|+..++.+++++|++.|.+.+..+..|.||+|.|+..++.++++.++.... ..+..+..|.||+|+|+
T Consensus         3 ~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~-~~~~~~~~~~~~l~~a~   81 (126)
T cd00204           3 RDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGA-DVNARDKDGNTPLHLAA   81 (126)
T ss_pred             cCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCC-CccccCCCCCCHHHHHH
Confidence            34567777777777777777777777777665555555554444444444444433333221 22333334445555555


Q ss_pred             hcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 004504          553 RRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELL  596 (748)
Q Consensus       553 ~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~L  596 (748)
                      ..++.+++++|+++|.+++..|..|.||+++|...++.+++++|
T Consensus        82 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L  125 (126)
T cd00204          82 RNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLL  125 (126)
T ss_pred             HcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHh
Confidence            55555555555555555555555555555555555555555554

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.64  E-value=9.6e-16  Score=115.06  Aligned_cols=75  Identities=36%  Similarity=0.502  Sum_probs=70.7

Q ss_pred             CCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q 004504          543 GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLA  617 (748)
Q Consensus       543 ~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A  617 (748)
                      .|++|||+|+..|.++++++|+..|++++.+|+.|-|||.-|+..||.++|++||++|||-.....+|.+.+..+
T Consensus        33 ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~PdG~~~~eat  107 (117)
T KOG4214|consen   33 GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPDGTALIEAT  107 (117)
T ss_pred             CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCCchhHHhhc
Confidence            678999999999999999999999999999999999999999999999999999999999988888998777655

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.62  E-value=6.6e-15  Score=129.24  Aligned_cols=117  Identities=34%  Similarity=0.523  Sum_probs=107.6

Q ss_pred             cCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q 004504          505 LLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLA  584 (748)
Q Consensus       505 ~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A  584 (748)
                      ..+..|.||||+|+..++.++++.++.... ..+..+..|.||||.|+..++.+++++|++.|++++..+..|.||+|+|
T Consensus         2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~-~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a   80 (126)
T cd00204           2 ARDEDGRTPLHLAASNGHLEVVKLLLENGA-DVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLA   80 (126)
T ss_pred             CcCcCCCCHHHHHHHcCcHHHHHHHHHcCC-CCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHH
Confidence            356789999999999999999998886654 3377788999999999999999999999999999999999999999999


Q ss_pred             HHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCC
Q 004504          585 AREGHGPMCELLISNGAVCDIKNARGETALSLARKNSS  622 (748)
Q Consensus       585 ~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~  622 (748)
                      +..++.+++++|+++|.+++..+..|.||+++|...+.
T Consensus        81 ~~~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~  118 (126)
T cd00204          81 ARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGH  118 (126)
T ss_pred             HHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCC
Confidence            99999999999999999999999999999999999844

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.59  E-value=8.8e-15  Score=109.95  Aligned_cols=104  Identities=23%  Similarity=0.306  Sum_probs=94.3

Q ss_pred             hHHHHHHHcCCHHHHHHHHhCCCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCC
Q 004504          306 TLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQ  385 (748)
Q Consensus       306 t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~  385 (748)
                      .-+.+++++|..+-|+.....|.+++.    ...|++|||+|+.+|+.+++++|+..|++++.+|++|-|||..|+..||
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~----~~ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH   79 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEGLNVNE----IYGGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGH   79 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHccccHHH----HhCCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhh
Confidence            346789999999999999999988763    3689999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCCccccCCCChhhhh
Q 004504          386 EECVKVLAKAGADFGLVSVSGQSASSIA  413 (748)
Q Consensus       386 ~~~v~~Ll~~ga~~~~~~~~g~t~l~~a  413 (748)
                      .+||++|++.|++-.....+|.+.+..+
T Consensus        80 ~~cVklLL~~GAdrt~~~PdG~~~~eat  107 (117)
T KOG4214|consen   80 RDCVKLLLQNGADRTIHAPDGTALIEAT  107 (117)
T ss_pred             HHHHHHHHHcCcccceeCCCchhHHhhc
Confidence            9999999999999888888887765443

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.54  E-value=6.7e-15  Score=106.41  Aligned_cols=55  Identities=44%  Similarity=0.581  Sum_probs=33.0

Q ss_pred             HHhCC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q 004504          563 LTSRG-YGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLA  617 (748)
Q Consensus       563 Ll~~g-~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A  617 (748)
                      |+++| +++|.+|..|+||||+|+.+|+.+++++|+++|+|++.+|..|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            67788 89999999999999999999999999999999999999999999999987

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.51  E-value=3e-13  Score=133.10  Aligned_cols=132  Identities=33%  Similarity=0.397  Sum_probs=118.1

Q ss_pred             CccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCC-----hhHHHHHHHHHh--hhcCCCC
Q 004504          469 NLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQN-----CDLFEKVMLEFA--LEKGNRN  541 (748)
Q Consensus       469 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~-----~~~~~~ll~~~~--~~~~~~~  541 (748)
                      .....+..+.++++.++..+..+++++++..|++++.++..|.||||+|+..++     .++++.|+....  ...+..|
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~  144 (235)
T COG0666          65 HLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRD  144 (235)
T ss_pred             ccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccC
Confidence            445566678899999999999999999999999999999999999999999998     888888888777  5777779


Q ss_pred             CCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 004504          542 AGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG  600 (748)
Q Consensus       542 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g  600 (748)
                      ..|.||||+|+..|+.+++++|++.|++++.++..|.|+++.|+..++.++++.|++.+
T Consensus       145 ~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         145 EDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             CCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999976

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.46  E-value=3.3e-13  Score=150.79  Aligned_cols=106  Identities=30%  Similarity=0.377  Sum_probs=96.4

Q ss_pred             hHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCCCc
Q 004504          546 YALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKN  625 (748)
Q Consensus       546 t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~  625 (748)
                      +.|+.|+..|+.+++++|++.|+++|.+|..|+||||+|+..|+.+++++|+++|+|+|.+|..|.||||+|+..+..  
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~--  161 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFR--  161 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcH--
Confidence            468999999999999999999999999999999999999999999999999999999999999999999999998654  


Q ss_pred             hhHHHHHHHHHHHHHhC-------CCCcccccCCCCCCCchhh
Q 004504          626 DAELVILDEVARMLVLG-------GGHVLKHTKGGKGTPHRKD  661 (748)
Q Consensus       626 ~~~~~~~~~~~~~Ll~~-------ga~~~~~d~~g~t~l~~a~  661 (748)
                              +++++|+.+       |++++..+..|++|+....
T Consensus       162 --------~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        162 --------EVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS  196 (664)
T ss_pred             --------HHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence                    799999988       9999999999988866544

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.45  E-value=1.5e-13  Score=98.96  Aligned_cols=54  Identities=43%  Similarity=0.676  Sum_probs=46.4

Q ss_pred             CchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 004504          544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLI  597 (748)
Q Consensus       544 g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll  597 (748)
                      |+||||+|++.|+.+++++|+++|+|+|.+|.+|+||||+|+..|+.+++++||
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            679999999999999999999999999999999999999999999999999996

...

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.43  E-value=3.4e-12  Score=125.47  Aligned_cols=129  Identities=29%  Similarity=0.407  Sum_probs=115.2

Q ss_pred             ccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCC-----HHHHHHHHhCCC---CCCCCCC
Q 004504          504 KLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGD-----LDAVRLLTSRGY---GVNVPDG  575 (748)
Q Consensus       504 ~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~-----~~~v~~Ll~~g~---d~n~~d~  575 (748)
                      ...+..+.++++.++..+..+++.+++ ..+.+++..+..|.||||+|+..++     .+++++|++.|+   +.+.+|.
T Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~  145 (235)
T COG0666          67 AARDLDGRLPLHSAASKGDDKIVKLLL-ASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDE  145 (235)
T ss_pred             ccCCccccCHHHHHHHcCcHHHHHHHH-HcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCC
Confidence            456677899999999999999985554 5555669999999999999999999     999999999999   5666799


Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCCCchhHHHHHHHHHHHHHhCC
Q 004504          576 DGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGG  643 (748)
Q Consensus       576 ~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~g  643 (748)
                      .|+||||+|+..|+.+++++|++.|++++.++..|.|+++.|+..+..          ++++.+++.+
T Consensus       146 ~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~----------~~~~~l~~~~  203 (235)
T COG0666         146 DGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRI----------ELVKLLLDKG  203 (235)
T ss_pred             CCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchH----------HHHHHHHhcC
Confidence            999999999999999999999999999999999999999999998654          6888888866

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.42  E-value=1.5e-12  Score=119.75  Aligned_cols=111  Identities=29%  Similarity=0.391  Sum_probs=92.3

Q ss_pred             cHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCC-CCCCCcHHHHHHHcCCH
Q 004504          512 TAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVP-DGDGYTPLMLAAREGHG  590 (748)
Q Consensus       512 t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~-d~~g~tpL~~A~~~~~~  590 (748)
                      .||.-++..+..+-+..||.. -...+..|..|+|+|..|+..|+.+++++|++.|+|+|.. +..++||||+|+.+|+.
T Consensus        14 ~~Lle~i~Kndt~~a~~LLs~-vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~   92 (396)
T KOG1710|consen   14 SPLLEAIDKNDTEAALALLST-VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQ   92 (396)
T ss_pred             hHHHHHHccCcHHHHHHHHHH-hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCc
Confidence            444455555555555444443 2345677788899999999999999999999999999964 67899999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCC
Q 004504          591 PMCELLISNGAVCDIKNARGETALSLARKNSSM  623 (748)
Q Consensus       591 ~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~  623 (748)
                      ++.++|++.||.+...|.-|+|+-.+|+.-|+.
T Consensus        93 dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H  125 (396)
T KOG1710|consen   93 DVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHH  125 (396)
T ss_pred             hHHHHHHhccCccccccchhhhHHHHHHHhcch
Confidence            999999999999999999999999999998765

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.37  E-value=2.8e-12  Score=143.35  Aligned_cols=106  Identities=28%  Similarity=0.331  Sum_probs=85.1

Q ss_pred             hHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHH
Q 004504          479 SAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLD  558 (748)
Q Consensus       479 t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~  558 (748)
                      +.|+.|+..|+.+++++|++.|+++|.+|..|                                  +||||+|+..|+.+
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G----------------------------------~TpLh~Aa~~g~~e  129 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADPNCRDYDG----------------------------------RTPLHIACANGHVQ  129 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC----------------------------------CcHHHHHHHCCCHH
Confidence            35788888888888888888888887776644                                  45777777788888


Q ss_pred             HHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhC-------CCCCCCCCCCCCcHHHHHH
Q 004504          559 AVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISN-------GAVCDIKNARGETALSLAR  618 (748)
Q Consensus       559 ~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-------gad~~~~~~~g~t~L~~A~  618 (748)
                      ++++|+++|+|+|.+|..|.||||+|+..|+.+++++|+++       |++++..+..|.+|+..+.
T Consensus       130 iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        130 VVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRHSQCHFELGANAKPDSFTGKPPSLEDS  196 (664)
T ss_pred             HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhCCCcccccCCCCCccccCCCCccchhh
Confidence            88888888888888888888888888888888888888887       7888777777777766554

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.37  E-value=1.8e-12  Score=128.90  Aligned_cols=115  Identities=30%  Similarity=0.447  Sum_probs=93.6

Q ss_pred             HHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 004504          517 SELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELL  596 (748)
Q Consensus       517 A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~L  596 (748)
                      |+..|..++|+.++.+. .|....|..|-|+||-|+..||.+||+||++.|+|||+.|.+||||||+|+..++..+++.|
T Consensus       557 aaLeGEldlVq~~i~ev-~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqL  635 (752)
T KOG0515|consen  557 AALEGELDLVQRIIYEV-TDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQL  635 (752)
T ss_pred             hhhcchHHHHHHHHHhh-cCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHH
Confidence            66677777777766543 35666778899999999999999999999999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCC-CCCCcHHHHHHhcCCCCchhHHHHHHHHHHHHH
Q 004504          597 ISNGAVCDIKN-ARGETALSLARKNSSMKNDAELVILDEVARMLV  640 (748)
Q Consensus       597 l~~gad~~~~~-~~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~Ll  640 (748)
                      ++.||-+-+.. .++.||..-+-....-        .+.|.++|-
T Consensus       636 Ve~GaavfAsTlSDmeTa~eKCee~eeG--------Y~~CsqyL~  672 (752)
T KOG0515|consen  636 VESGAAVFASTLSDMETAAEKCEEMEEG--------YDQCSQYLY  672 (752)
T ss_pred             HhccceEEeeecccccchhhhcchhhhh--------HHHHHHHHH
Confidence            99999876654 5788887766543211        235777774

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.36  E-value=7.2e-13  Score=95.78  Aligned_cols=54  Identities=37%  Similarity=0.420  Sum_probs=33.0

Q ss_pred             HHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH
Q 004504          531 LEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLA  584 (748)
Q Consensus       531 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A  584 (748)
                      .....+++..|..|+||||+||..|+.+++++|++.|+|++.+|..|+||||+|
T Consensus         3 ~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    3 EHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             ---T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             ccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            334467777888888999999999999999999999999999999999999997

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.35  E-value=6.3e-12  Score=115.71  Aligned_cols=119  Identities=29%  Similarity=0.339  Sum_probs=104.5

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCCh
Q 004504          444 FSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNC  523 (748)
Q Consensus       444 ~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~  523 (748)
                      ..||.-++..|+.+....||..- ..+|.+|..|.|+|..|+..|+.+++++|++.|+|+|...                
T Consensus        13 ~~~Lle~i~Kndt~~a~~LLs~v-r~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~q----------------   75 (396)
T KOG1710|consen   13 KSPLLEAIDKNDTEAALALLSTV-RQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQ----------------   75 (396)
T ss_pred             hhHHHHHHccCcHHHHHHHHHHh-hhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCccc----------------
Confidence            35899999999999999999874 4689999999999999999999999999999999998532                


Q ss_pred             hHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHH
Q 004504          524 DLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELL  596 (748)
Q Consensus       524 ~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~L  596 (748)
                                       +..++||||+|+.+|+.++.++|++.|+.....|.-|+|+-.+|+.-|+.++|..+
T Consensus        76 -----------------hg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iI  131 (396)
T KOG1710|consen   76 -----------------HGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAII  131 (396)
T ss_pred             -----------------ccccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHH
Confidence                             23567899999999999999999999999999999999999999999988877655

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.32  E-value=4e-12  Score=91.54  Aligned_cols=54  Identities=39%  Similarity=0.541  Sum_probs=40.9

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 004504          340 EFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLA  393 (748)
Q Consensus       340 ~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll  393 (748)
                      |.||||+|++.|+.+++++|+++|++++.+|.+|.||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            567888888888888888888888888888888888888888888888888875

...

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.27  E-value=1e-11  Score=123.64  Aligned_cols=101  Identities=27%  Similarity=0.312  Sum_probs=89.4

Q ss_pred             HHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCCCch
Q 004504          547 ALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKND  626 (748)
Q Consensus       547 ~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~  626 (748)
                      .|.-|+..|.+|+|+-.+..--|+...|..|-||||-|+..||.+||+||++.|+|+|+.|.+|+||||+|+..++.   
T Consensus       553 LLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv---  629 (752)
T KOG0515|consen  553 LLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNV---  629 (752)
T ss_pred             HHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCch---
Confidence            34568889999999999998889999999999999999999999999999999999999999999999999998665   


Q ss_pred             hHHHHHHHHHHHHHhCCCCccccc-CCCCCCC
Q 004504          627 AELVILDEVARMLVLGGGHVLKHT-KGGKGTP  657 (748)
Q Consensus       627 ~~~~~~~~~~~~Ll~~ga~~~~~d-~~g~t~l  657 (748)
                             .+.+.|+++||.+...+ .++.|+.
T Consensus       630 -------~~ckqLVe~GaavfAsTlSDmeTa~  654 (752)
T KOG0515|consen  630 -------PMCKQLVESGAAVFASTLSDMETAA  654 (752)
T ss_pred             -------HHHHHHHhccceEEeeecccccchh
Confidence                   58999999999876554 4455554

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=99.17  E-value=2.9e-11  Score=126.75  Aligned_cols=165  Identities=24%  Similarity=0.239  Sum_probs=115.8

Q ss_pred             HHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Q 004504          529 VMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPD-GDGYTPLMLAAREGHGPMCELLISNGAVCDIKN  607 (748)
Q Consensus       529 ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d-~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~  607 (748)
                      +...+..-.+..|..|+|+||+|+..+..+++++|+++|+|++.+| ..|+||||-|+.+|+++++-+||++|+...++|
T Consensus        37 ~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~D  116 (1267)
T KOG0783|consen   37 SEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKD  116 (1267)
T ss_pred             HHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEec
Confidence            3344455577888999999999999999999999999999999998 479999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCcccccCCCCCCCchhhhhhhccccceeeccCCCcceeecccc
Q 004504          608 ARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHRKDIRMLGSEGVLRWGNSRRRNVICREAK  687 (748)
Q Consensus       608 ~~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~d~~g~t~l~~a~~~~~~~~~~~~w~~~~~~~~~~~~~~  687 (748)
                      ++|.+||+..++.....                                .|.+.   ....+++.|+......+..-...
T Consensus       117 keglsplq~~~r~~~~~--------------------------------i~~~~---d~pndvy~wG~N~N~tLGign~~  161 (1267)
T KOG0783|consen  117 KEGLSPLQFLSRVLSST--------------------------------IHPVL---DLPNDVYGWGTNVNNTLGIGNGK  161 (1267)
T ss_pred             ccCCCHHHHHhhccccc--------------------------------ccccc---CCccceeEecccccccccccCCC
Confidence            99999999998742210                                01110   01257788887666555544433


Q ss_pred             cCCCHHHHhhhcCCC---CCCCCceEEEEeecCceEEEEecCch
Q 004504          688 LGPSPAFQKNRRGKG---DVNEPGVFHIVTTKNNEVHFVCQGGL  728 (748)
Q Consensus       688 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~  728 (748)
                      .+.+|-...--+..+   ..-...-|+.+.-+.+...|+|..|.
T Consensus       162 ~~~~Pe~Vdlf~~Sg~~~~qV~l~kfHSvfl~~kgqvY~cGhG~  205 (1267)
T KOG0783|consen  162 EPSSPERVDLFKTSGQLFSQVQLSKFHSVFLTEKGQVYVCGHGA  205 (1267)
T ss_pred             CCCChHHhHHHHhccHHHHHHHHhhceeeEecCCCcEEEeccCC
Confidence            333332211111111   11112226655555666689998775

>PF13606 Ank_3: Ankyrin repeat

Probab=98.89  E-value=2.1e-09  Score=65.51  Aligned_cols=29  Identities=38%  Similarity=0.606  Sum_probs=21.6

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 004504          576 DGYTPLMLAAREGHGPMCELLISNGAVCD  604 (748)
Q Consensus       576 ~g~tpL~~A~~~~~~~~v~~Ll~~gad~~  604 (748)
                      +|+||||+|+++|+.++|++|+++|+|+|
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            46777777777777777777777777776

>PF13606 Ank_3: Ankyrin repeat

Probab=98.84  E-value=3.7e-09  Score=64.45  Aligned_cols=30  Identities=53%  Similarity=0.715  Sum_probs=27.7

Q ss_pred             CCchHHHHHHhcCCHHHHHHHHHcCCCCCc
Q 004504           79 SDVTALFLAAHSGNVTLVKKLLSTGADVNQ  108 (748)
Q Consensus        79 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~  108 (748)
                      +|+||||+||+.|+.|+|++|+++|+|+|.
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~   30 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA   30 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence            478999999999999999999999999973

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.84  E-value=1.2e-08  Score=101.26  Aligned_cols=82  Identities=33%  Similarity=0.388  Sum_probs=74.6

Q ss_pred             HHHHHHhcCCHHHHHHHHhCCCCCCCCC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCCCc
Q 004504          547 ALHCAARRGDLDAVRLLTSRGYGVNVPD-GDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKN  625 (748)
Q Consensus       547 ~L~~A~~~~~~~~v~~Ll~~g~d~n~~d-~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~  625 (748)
                      -||..++.|++++.-.||..||++|..+ ..|.||||.|++.|+..-+++|+=+|||+++.|..|.||+.||...|+. .
T Consensus       136 QLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~-~  214 (669)
T KOG0818|consen  136 QLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHH-E  214 (669)
T ss_pred             HHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCch-H
Confidence            6899999999999999999999999887 5799999999999999999999999999999999999999999998654 3


Q ss_pred             hhHH
Q 004504          626 DAEL  629 (748)
Q Consensus       626 ~~~~  629 (748)
                      ..++
T Consensus       215 laeR  218 (669)
T KOG0818|consen  215 LAER  218 (669)
T ss_pred             HHHH
Confidence            4443

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.81  E-value=5.7e-09  Score=65.95  Aligned_cols=33  Identities=39%  Similarity=0.672  Sum_probs=24.0

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCC
Q 004504          576 DGYTPLMLAAREGHGPMCELLISNGAVCDIKNA  608 (748)
Q Consensus       576 ~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~  608 (748)
                      +|+||||+|+.+|+.+++++|+++|++++.+|+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence            467777777777777777777777777776653

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.71  E-value=7e-08  Score=96.07  Aligned_cols=96  Identities=28%  Similarity=0.449  Sum_probs=83.3

Q ss_pred             ccccCCCCChH------HHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCC
Q 004504          470 LDYQDDNGFSA------VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAG  543 (748)
Q Consensus       470 ~~~~~~~g~t~------L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~  543 (748)
                      +..+|.+|.+.      ||..++.|+.+..-.||..||++|..+.+                                 .
T Consensus       120 ~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpe---------------------------------k  166 (669)
T KOG0818|consen  120 LPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPE---------------------------------K  166 (669)
T ss_pred             CCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcc---------------------------------c
Confidence            34566666654      89999999999999999999999976642                                 5


Q ss_pred             CchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Q 004504          544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLIS  598 (748)
Q Consensus       544 g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~  598 (748)
                      |.||||.|++.|+..-+++|+-+|||+++.|.+|+||+.+|-..||-++.+-|++
T Consensus       167 g~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~laeRl~e  221 (669)
T KOG0818|consen  167 GNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELAERLVE  221 (669)
T ss_pred             CCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHHHHHHH
Confidence            6789999999999999999999999999999999999999999999887777765

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.67  E-value=3e-08  Score=62.59  Aligned_cols=32  Identities=41%  Similarity=0.533  Sum_probs=30.0

Q ss_pred             CCchHHHHHHhcCCHHHHHHHHHcCCCCCccc
Q 004504           79 SDVTALFLAAHSGNVTLVKKLLSTGADVNQKL  110 (748)
Q Consensus        79 ~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~  110 (748)
                      +|.||||+||..|+.++|++|+++|++++.++
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD   32 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            48999999999999999999999999999875

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.63  E-value=1.6e-08  Score=106.60  Aligned_cols=94  Identities=28%  Similarity=0.399  Sum_probs=79.4

Q ss_pred             HHHHhcCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCC
Q 004504          460 KALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGN  539 (748)
Q Consensus       460 ~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~  539 (748)
                      -++.+.+.--.|..|..|+|+||+|+..+..+++++|+++|+|++.+|.+                              
T Consensus        35 ~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~E------------------------------   84 (1267)
T KOG0783|consen   35 GFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEE------------------------------   84 (1267)
T ss_pred             HHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeecccc------------------------------
Confidence            34444444457888999999999999999999999999999999988863                              


Q ss_pred             CCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHH
Q 004504          540 RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAR  586 (748)
Q Consensus       540 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~  586 (748)
                         .|+||||.|+..|++|++-+||++|+.+..+|++|.+||.+-++
T Consensus        85 ---SG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq~~~r  128 (1267)
T KOG0783|consen   85 ---SGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQFLSR  128 (1267)
T ss_pred             ---ccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHHHHhh
Confidence               57788888888899999999999998888899999999988876

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.63  E-value=2.9e-08  Score=98.27  Aligned_cols=92  Identities=29%  Similarity=0.357  Sum_probs=81.8

Q ss_pred             CCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHhc
Q 004504          542 AGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLIS-NGAVCDIKNARGETALSLARKN  620 (748)
Q Consensus       542 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~-~gad~~~~~~~g~t~L~~A~~~  620 (748)
                      .++..++++|++.|++..++.+.-.|.|++.+|.+.+|+||.|+..|+.+++++|++ .+.|++.+|..|+|||.-|...
T Consensus       504 ~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F  583 (622)
T KOG0506|consen  504 NDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHF  583 (622)
T ss_pred             ccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhc
Confidence            455568999999999999999999999999999999999999999999999999999 5889999999999999999988


Q ss_pred             CCCCchhHHHHHHHHHHHHHhCC
Q 004504          621 SSMKNDAELVILDEVARMLVLGG  643 (748)
Q Consensus       621 ~~~~~~~~~~~~~~~~~~Ll~~g  643 (748)
                      ++.          +++++|-+.-
T Consensus       584 ~h~----------~v~k~L~~~~  596 (622)
T KOG0506|consen  584 KHK----------EVVKLLEEAQ  596 (622)
T ss_pred             CcH----------HHHHHHHHHh
Confidence            543          7888886543

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=98.55  E-value=3e-07  Score=98.89  Aligned_cols=135  Identities=21%  Similarity=0.230  Sum_probs=105.7

Q ss_pred             hhhHHHHHHHhcCCHHHHHHhhcCCCC---CccccccccccchhhhhhhccCCCcccchhhhcccCCchHHHHHHhcCCH
Q 004504           17 EVSQRLLEATLAGDLKSATECIADPYV---DVNFVGAVSLKTRKTEVVLREGKPSEVRVEFEEFKSDVTALFLAAHSGNV   93 (748)
Q Consensus        17 ~~~~~l~~A~~~G~~~~v~~ll~~~~~---d~n~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~   93 (748)
                      ..-..++.|+..||...|+.++++...   ++||++                            .-|+++|+.|..+-+.
T Consensus        24 ~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d----------------------------~lGr~al~iai~nenl   75 (822)
T KOG3609|consen   24 EGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRD----------------------------PLGRLALHIAIDNENL   75 (822)
T ss_pred             hhhHHHHHHHHcCChHHHHHHHHhccccccchhccC----------------------------hHhhhceecccccccH
Confidence            344678999999999999999998653   455444                            7799999999999999


Q ss_pred             HHHHHHHHcCCCCCcccccChhHHHHHHhCcHHHHHHHHHcCCCCccchhHHHHHHhcCcHHHHHHHhcCCCCCCCcccc
Q 004504           94 TLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVH  173 (748)
Q Consensus        94 ~iv~~Ll~~ga~~~~~~~~g~~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~l~~A~~~g~~~~v~~Ll~~~~~~~~~~~t  173 (748)
                      |++++|++++..+      |.+|.+|+..|..+.|+.++.+-.......    .            ..+.....-..+.|
T Consensus        76 e~~eLLl~~~~~~------gdALL~aI~~~~v~~VE~ll~~~~~~~~~~----~------------~~d~~~~~ft~dit  133 (822)
T KOG3609|consen   76 ELQELLLDTSSEE------GDALLLAIAVGSVPLVELLLVHFVDAPYLE----R------------SGDANSPHFTPDIT  133 (822)
T ss_pred             HHHHHHhcCcccc------chHHHHHHHHHHHHHHHHHHhcccccchhc----c------------ccccCcccCCCCcc
Confidence            9999999997655      679999999999999999998865443211    0            11111123344689


Q ss_pred             HHHHHhhcCCHHHHHHHHHCCCCCccch
Q 004504          174 SLVTACCRGFVDVVDTLMKCGVDINATD  201 (748)
Q Consensus       174 ~L~~A~~~g~~~~v~~Ll~~gad~n~~~  201 (748)
                      ||..||..++.|+++.|+++|+++...-
T Consensus       134 PliLAAh~NnyEil~~Ll~kg~~i~~PH  161 (822)
T KOG3609|consen  134 PLMLAAHLNNFEILQCLLTRGHCIPIPH  161 (822)
T ss_pred             HHHHHHHhcchHHHHHHHHcCCCCCCCc
Confidence            9999999999999999999998876543

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=98.50  E-value=1.5e-07  Score=95.17  Aligned_cols=105  Identities=25%  Similarity=0.329  Sum_probs=89.5

Q ss_pred             HHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC--CCCCCCCCCcHHHHHHhcCCCCc
Q 004504          548 LHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV--CDIKNARGETALSLARKNSSMKN  625 (748)
Q Consensus       548 L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad--~~~~~~~g~t~L~~A~~~~~~~~  625 (748)
                      +..|+..+++--++.+...|-++-.++.+..|.||+|+..|+-++|+|+|++|..  ++..|..|+|+||-|+..++.  
T Consensus       870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r--  947 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNR--  947 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcch--
Confidence            4456666666666666777888888899999999999999999999999999976  678889999999999988654  


Q ss_pred             hhHHHHHHHHHHHHHhCCCCcccccCCCCCCCchhhh
Q 004504          626 DAELVILDEVARMLVLGGGHVLKHTKGGKGTPHRKDI  662 (748)
Q Consensus       626 ~~~~~~~~~~~~~Ll~~ga~~~~~d~~g~t~l~~a~~  662 (748)
                              .+..+|++.||.+...|..|+||-..|..
T Consensus       948 --------~vc~~lvdagasl~ktd~kg~tp~eraqq  976 (1004)
T KOG0782|consen  948 --------AVCQLLVDAGASLRKTDSKGKTPQERAQQ  976 (1004)
T ss_pred             --------HHHHHHHhcchhheecccCCCChHHHHHh
Confidence                    58899999999999999999999888754

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.47  E-value=3.5e-07  Score=93.04  Aligned_cols=90  Identities=38%  Similarity=0.422  Sum_probs=78.0

Q ss_pred             HHHHHHhcCCHHHHHHHHhCCCC--CCC--CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCC
Q 004504          547 ALHCAARRGDLDAVRLLTSRGYG--VNV--PDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSS  622 (748)
Q Consensus       547 ~L~~A~~~~~~~~v~~Ll~~g~d--~n~--~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~  622 (748)
                      -|..|+...++..+-+||.+|..  +|.  .+.+|+|+||+||+.|++.+.++|+=+|+|+-++|..|+|||.||.+.+.
T Consensus       627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~s  706 (749)
T KOG0705|consen  627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGS  706 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhccc
Confidence            45667778889999999999854  343  35688999999999999999999999999999999999999999999854


Q ss_pred             CCchhHHHHHHHHHHHHHhCCCCc
Q 004504          623 MKNDAELVILDEVARMLVLGGGHV  646 (748)
Q Consensus       623 ~~~~~~~~~~~~~~~~Ll~~ga~~  646 (748)
                      .          |++.+|+++|...
T Consensus       707 q----------ec~d~llq~gcp~  720 (749)
T KOG0705|consen  707 Q----------ECIDVLLQYGCPD  720 (749)
T ss_pred             H----------HHHHHHHHcCCCc
Confidence            3          8999999999743

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.46  E-value=2e-07  Score=92.54  Aligned_cols=92  Identities=27%  Similarity=0.358  Sum_probs=67.0

Q ss_pred             CCCChHHHHHHHcCCHHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhc
Q 004504          475 DNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARR  554 (748)
Q Consensus       475 ~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~  554 (748)
                      .++..++++|++.|.+..++.+.-.|.|++..|.+.+                                  |+||.||..
T Consensus       504 ~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~R----------------------------------TaLHvAAaE  549 (622)
T KOG0506|consen  504 NDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDR----------------------------------TALHVAAAE  549 (622)
T ss_pred             ccchhhhhhhhhcCCHHHHHHHHHhcccccccccccc----------------------------------hhheeeccc
Confidence            4455678888888888888888888888877776555                                  566666666


Q ss_pred             CCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCC
Q 004504          555 GDLDAVRLLTSR-GYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG  600 (748)
Q Consensus       555 ~~~~~v~~Ll~~-g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g  600 (748)
                      |+.+++++|++. +.|++.+|.+|+|||.-|...+|.+++++|-++-
T Consensus       550 G~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~~~  596 (622)
T KOG0506|consen  550 GHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEEAQ  596 (622)
T ss_pred             CceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHHHHHHHHHh
Confidence            777777777764 6777777777777777777777777777776653

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.45  E-value=6.4e-07  Score=86.46  Aligned_cols=73  Identities=37%  Similarity=0.487  Sum_probs=65.8

Q ss_pred             hHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q 004504          546 YALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLAR  618 (748)
Q Consensus       546 t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~  618 (748)
                      --|..||+.|+.+.|++|++.|.+||++|....+||.+|+..||.++|++||++||-+..-..+|...+.-|.
T Consensus        38 ~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~YgaL  110 (516)
T KOG0511|consen   38 GELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCHYGAL  110 (516)
T ss_pred             HHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhhhhhh
Confidence            3689999999999999999999999999999999999999999999999999999988766667777655444

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.44  E-value=7.9e-07  Score=90.53  Aligned_cols=65  Identities=31%  Similarity=0.396  Sum_probs=60.6

Q ss_pred             CCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Q 004504          539 NRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC  603 (748)
Q Consensus       539 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~  603 (748)
                      ..+.+|+|+||+||+.|++.+.++|+=+|+|+-++|..|+|+|.||-+.|..+++..|+++|...
T Consensus       656 ~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~  720 (749)
T KOG0705|consen  656 CGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVLLQYGCPD  720 (749)
T ss_pred             ccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHHHHHHHHcCCCc
Confidence            34567899999999999999999999999999999999999999999999999999999999753

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=98.40  E-value=9.8e-07  Score=89.34  Aligned_cols=79  Identities=27%  Similarity=0.423  Sum_probs=41.6

Q ss_pred             CCCchHHHHHHhcCCHHHHHHHHhCCCC--CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHh
Q 004504          542 AGGFYALHCAARRGDLDAVRLLTSRGYG--VNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARK  619 (748)
Q Consensus       542 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~d--~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~  619 (748)
                      .+..|.||+|+..|+-++|++++++|..  ++..|..|.|+||-|+..++-.++++|++.||.+-.+|..|.||-..|-+
T Consensus       897 ~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~eraqq  976 (1004)
T KOG0782|consen  897 PDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERAQQ  976 (1004)
T ss_pred             cchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHHHh
Confidence            3344455555555555555555555432  34444555555555555555555555555555555555555555555544


Q ss_pred             c
Q 004504          620 N  620 (748)
Q Consensus       620 ~  620 (748)
                      .
T Consensus       977 a  977 (1004)
T KOG0782|consen  977 A  977 (1004)
T ss_pred             c
Confidence            4

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.39  E-value=6.9e-07  Score=86.25  Aligned_cols=79  Identities=29%  Similarity=0.360  Sum_probs=66.5

Q ss_pred             hhHHHHHHHhcCCHHHHHHhhcCCCCCccccccccccchhhhhhhccCCCcccchhhhcccCCchHHHHHHhcCCHHHHH
Q 004504           18 VSQRLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEVVLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVK   97 (748)
Q Consensus        18 ~~~~l~~A~~~G~~~~v~~ll~~~~~d~n~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~iv~   97 (748)
                      ....|++||+.||++-|++|++.+ +++|..+                            +.+.+||.+|+.+||.++|+
T Consensus        36 ~f~elceacR~GD~d~v~~LVetg-vnVN~vD----------------------------~fD~spL~lAsLcGHe~vvk   86 (516)
T KOG0511|consen   36 PFGELCEACRAGDVDRVRYLVETG-VNVNAVD----------------------------RFDSSPLYLASLCGHEDVVK   86 (516)
T ss_pred             chHHHHHHhhcccHHHHHHHHHhC-CCcchhh----------------------------cccccHHHHHHHcCcHHHHH
Confidence            356799999999999999999966 8888654                            67789999999999999999


Q ss_pred             HHHHcCCCCCcccccChhHHHHHHhCcH
Q 004504           98 KLLSTGADVNQKLFRGFATTIAVREGHL  125 (748)
Q Consensus        98 ~Ll~~ga~~~~~~~~g~~l~~A~~~g~~  125 (748)
                      +|+++||--......|---|+++.+.++
T Consensus        87 lLLenGAiC~rdtf~G~RC~YgaLnd~I  114 (516)
T KOG0511|consen   87 LLLENGAICSRDTFDGDRCHYGALNDRI  114 (516)
T ss_pred             HHHHcCCcccccccCcchhhhhhhhHHH
Confidence            9999999888777778767777766543

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.34  E-value=9.9e-07  Score=89.49  Aligned_cols=76  Identities=33%  Similarity=0.374  Sum_probs=44.3

Q ss_pred             HHHHHHhcCCHHHHHHHH--hCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCC
Q 004504          547 ALHCAARRGDLDAVRLLT--SRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSS  622 (748)
Q Consensus       547 ~L~~A~~~~~~~~v~~Ll--~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~  622 (748)
                      |+|+++.....+-+..++  +.+..++.+|..|+||||+|+.-|+.+.++.|+.+|||+..+|+.|++|||.|+..++
T Consensus        23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~  100 (560)
T KOG0522|consen   23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGN  100 (560)
T ss_pred             ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCC
Confidence            355555555444333322  2234456666666666666666666666666666666666666666666666666644

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.30  E-value=1.7e-06  Score=87.82  Aligned_cols=87  Identities=24%  Similarity=0.449  Sum_probs=68.5

Q ss_pred             HHHHHHHcCChhHHHH-HHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHH
Q 004504          513 AIMLSELNQNCDLFEK-VMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGP  591 (748)
Q Consensus       513 ~L~~A~~~~~~~~~~~-ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~  591 (748)
                      |+|.++.....+-+.. +..+....++..|..|.||||+|+..|+.+.++.|+..|+|+..+|+.|++|||-|+..|+.+
T Consensus        23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q  102 (560)
T KOG0522|consen   23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQ  102 (560)
T ss_pred             ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHH
Confidence            3566555544443333 333345566777888899999999999999999999999999999999999999999999998


Q ss_pred             HHHHHHhC
Q 004504          592 MCELLISN  599 (748)
Q Consensus       592 ~v~~Ll~~  599 (748)
                      ++..++.+
T Consensus       103 ~i~~vlr~  110 (560)
T KOG0522|consen  103 IITEVLRH  110 (560)
T ss_pred             HHHHHHHH
Confidence            88777764

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=98.27  E-value=2e-06  Score=75.19  Aligned_cols=74  Identities=30%  Similarity=0.322  Sum_probs=60.3

Q ss_pred             hhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCC-CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCC
Q 004504          535 LEKGNRNAGGFYALHCAARRGDLDAVRLLTSRG-YGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNA  608 (748)
Q Consensus       535 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~  608 (748)
                      .++|.+|..||||++.|+..|+.+.+.+|+.+| ++|..+|..|.+++.+|-+.|..++++.|.++--+-...++
T Consensus         3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~p~n   77 (223)
T KOG2384|consen    3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSHPMN   77 (223)
T ss_pred             CCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCCCccc
Confidence            457788888899999988888888999999888 88888888888888888888888888888887444433333

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=98.22  E-value=1.8e-06  Score=96.18  Aligned_cols=79  Identities=35%  Similarity=0.458  Sum_probs=76.4

Q ss_pred             CCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhc
Q 004504          542 AGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKN  620 (748)
Q Consensus       542 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~  620 (748)
                      ..|.|+||.|+..+..-++++|+++|+++|.+|..|+||||.+...|+...+..|+++||+.++.+.+|++||++|...
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~  732 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEA  732 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhh
Confidence            3578999999999999999999999999999999999999999999999999999999999999999999999999877

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=98.20  E-value=5.3e-06  Score=89.55  Aligned_cols=119  Identities=25%  Similarity=0.243  Sum_probs=85.6

Q ss_pred             HHHHHHcCChhHHHHHHHHHh---hhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCH
Q 004504          514 IMLSELNQNCDLFEKVMLEFA---LEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHG  590 (748)
Q Consensus       514 L~~A~~~~~~~~~~~ll~~~~---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~  590 (748)
                      ...|+.+|+...++..+....   ..+|..|.-|+++|+.|+.+.+.+++++|++++..+       ..+|-+|+..|..
T Consensus        29 fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~~~v  101 (822)
T KOG3609|consen   29 FLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIAVGSV  101 (822)
T ss_pred             HHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHHHHHH
Confidence            344555555555555554433   245667777888888888888888888888876554       3478888888888


Q ss_pred             HHHHHHHhCCCCC----------CCCCCCCCcHHHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCcccc
Q 004504          591 PMCELLISNGAVC----------DIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKH  649 (748)
Q Consensus       591 ~~v~~Ll~~gad~----------~~~~~~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~~~~~  649 (748)
                      ++|++++.+-...          ...-.-+.|||.+|+..+++          ||+++|+.+|+++...
T Consensus       102 ~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~Nny----------Eil~~Ll~kg~~i~~P  160 (822)
T KOG3609|consen  102 PLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNF----------EILQCLLTRGHCIPIP  160 (822)
T ss_pred             HHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcch----------HHHHHHHHcCCCCCCC
Confidence            8888888763321          23345689999999999777          8999999999987543

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=98.13  E-value=6e-06  Score=72.26  Aligned_cols=76  Identities=14%  Similarity=0.114  Sum_probs=62.3

Q ss_pred             CCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCC
Q 004504          500 GADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDG  575 (748)
Q Consensus       500 gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~  575 (748)
                      +.++|.+|..|+|+++.|+..|+.+.+.+|+......+...|..|.+++.+|-+.|..++++.|.+.--+-...+.
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~p~n   77 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSHPMN   77 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCCCccc
Confidence            4578888899999999999999999888888888788888888888899999888999999888887444444433

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=97.91  E-value=1.1e-05  Score=90.21  Aligned_cols=88  Identities=24%  Similarity=0.220  Sum_probs=77.7

Q ss_pred             CCCCCCC--CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHhcCCCCchhHHHHHHHHHHHHHhCC
Q 004504          566 RGYGVNV--PDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGG  643 (748)
Q Consensus       566 ~g~d~n~--~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~~~~~~~~~~~Ll~~g  643 (748)
                      .++++|-  .-..|.|+||.|+..+..-++++|+++|+++|..|..|+||||.+...|+.          ..+..|+.+|
T Consensus       643 ~~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~----------~~~~~ll~~~  712 (785)
T KOG0521|consen  643 HGCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHT----------SIACLLLKRG  712 (785)
T ss_pred             chhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhccc----------chhhhhcccc
Confidence            3444443  235789999999999999999999999999999999999999999999776          4788899999


Q ss_pred             CCcccccCCCCCCCchhhhh
Q 004504          644 GHVLKHTKGGKGTPHRKDIR  663 (748)
Q Consensus       644 a~~~~~d~~g~t~l~~a~~~  663 (748)
                      |+.+..|.+|++|+++|...
T Consensus       713 a~~~a~~~~~~~~l~~a~~~  732 (785)
T KOG0521|consen  713 ADPNAFDPDGKLPLDIAMEA  732 (785)
T ss_pred             ccccccCccCcchhhHHhhh
Confidence            99999999999999999654

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=97.67  E-value=4.1e-05  Score=84.78  Aligned_cols=120  Identities=25%  Similarity=0.208  Sum_probs=87.8

Q ss_pred             CccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHh-CCCCCCCCCCCCCcHH
Q 004504          503 VKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTS-RGYGVNVPDGDGYTPL  581 (748)
Q Consensus       503 ~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~d~n~~d~~g~tpL  581 (748)
                      .......|++.+|+++..+...+++.++...+......+.+|.-.+|+ |..++.++.-+|+. .|..++.+|..|+|||
T Consensus       567 ~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL  645 (975)
T KOG0520|consen  567 SSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPL  645 (975)
T ss_pred             cccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCccc
Confidence            344556778888888888888888888775444444445556667777 44555666555554 5788899999999999


Q ss_pred             HHHHHcCCHHHHHHHHhCCCCCCC------CCCCCCcHHHHHHhcCCC
Q 004504          582 MLAAREGHGPMCELLISNGAVCDI------KNARGETALSLARKNSSM  623 (748)
Q Consensus       582 ~~A~~~~~~~~v~~Ll~~gad~~~------~~~~g~t~L~~A~~~~~~  623 (748)
                      |+|+.+|+..++..|++.|++.+.      .+..|.|+-.+|..++..
T Consensus       646 ~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~  693 (975)
T KOG0520|consen  646 HWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHK  693 (975)
T ss_pred             chHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhccccc
Confidence            999999999999999988876443      344689999999877544

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=97.66  E-value=4.7e-05  Score=84.37  Aligned_cols=129  Identities=18%  Similarity=0.118  Sum_probs=108.3

Q ss_pred             ccccCCCCChHHHHHHHcCCHHHHHHHHHC-CCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHH
Q 004504          470 LDYQDDNGFSAVMVAASKGHVEVFRELVYA-GADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYAL  548 (748)
Q Consensus       470 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L  548 (748)
                      .......|.+.+|+++..++..+++.+++. |-.....|..|.-.+|+ |..++.+....++.-.+..++.+|..|+|||
T Consensus       567 ~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hf-ca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL  645 (975)
T KOG0520|consen  567 SSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHF-CAALGYEWAFLPISADGVAIDIRDRNGWTPL  645 (975)
T ss_pred             cccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhH-hhhcCCceeEEEEeecccccccccCCCCccc
Confidence            334456788999999999999999999986 77777788888888898 6666777777777788889999999999999


Q ss_pred             HHHHhcCCHHHHHHHHhCCCCCC------CCCCCCCcHHHHHHHcCCHHHHHHHHhC
Q 004504          549 HCAARRGDLDAVRLLTSRGYGVN------VPDGDGYTPLMLAAREGHGPMCELLISN  599 (748)
Q Consensus       549 ~~A~~~~~~~~v~~Ll~~g~d~n------~~d~~g~tpL~~A~~~~~~~~v~~Ll~~  599 (748)
                      |+|+..|+..++..|++.|++.+      ..+-.|.|+-..|-.+|+..+.-+|-+.
T Consensus       646 ~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  646 HWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             chHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            99999999999999998876644      3345799999999999998888887664

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=97.16  E-value=0.0031  Score=57.37  Aligned_cols=50  Identities=24%  Similarity=0.327  Sum_probs=40.3

Q ss_pred             CHHHHHHHHHCC-CCCccchhhhhhhcCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 004504          183 FVDVVDTLMKCG-VDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGAN  242 (748)
Q Consensus       183 ~~~~v~~Ll~~g-ad~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~  242 (748)
                      +..+++++|++| +++|..-+          +.+.|.|-|.-|+++++.+++.+||++||-
T Consensus       229 ~~kvL~~Fi~~Glv~vN~~F~----------~~NSGdtMLDNA~Ky~~~emi~~Llk~GA~  279 (284)
T PF06128_consen  229 SYKVLEYFINRGLVDVNKKFQ----------KVNSGDTMLDNAMKYKNSEMIAFLLKYGAI  279 (284)
T ss_pred             cHHHHHHHHhccccccchhhh----------ccCCcchHHHhHHhcCcHHHHHHHHHcCcc
Confidence            457888888887 67776543          346789999999999999999999999984

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=96.96  E-value=0.00089  Score=67.89  Aligned_cols=63  Identities=24%  Similarity=0.229  Sum_probs=55.1

Q ss_pred             CHHHHHHHHhCCCCCCC------CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Q 004504          556 DLDAVRLLTSRGYGVNV------PDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLAR  618 (748)
Q Consensus       556 ~~~~v~~Ll~~g~d~n~------~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~t~L~~A~  618 (748)
                      -.+.+++|.+++++.|.      .+..-.|+||+|+.+|..++|.+||+.|+|+.++|..|+||..++.
T Consensus       403 ~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  403 EPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             chhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence            46788999999887764      3445679999999999999999999999999999999999999987

>smart00248 ANK ankyrin repeats

Probab=96.87  E-value=0.0019  Score=38.72  Aligned_cols=28  Identities=43%  Similarity=0.628  Sum_probs=18.1

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCCC
Q 004504          577 GYTPLMLAAREGHGPMCELLISNGAVCD  604 (748)
Q Consensus       577 g~tpL~~A~~~~~~~~v~~Ll~~gad~~  604 (748)
                      |.||+|+|+..++.+++++|+++|.+++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            5566666666666666666666666543

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>smart00248 ANK ankyrin repeats

Probab=96.73  E-value=0.0024  Score=38.29  Aligned_cols=28  Identities=54%  Similarity=0.744  Sum_probs=24.4

Q ss_pred             CchHHHHHHhcCCHHHHHHHHHcCCCCC
Q 004504           80 DVTALFLAAHSGNVTLVKKLLSTGADVN  107 (748)
Q Consensus        80 g~t~L~~A~~~g~~~iv~~Ll~~ga~~~  107 (748)
                      |.||||+|+..|+.+++++|+++|.+++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            5789999999999999999999888764

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=96.59  E-value=0.017  Score=51.30  Aligned_cols=133  Identities=15%  Similarity=0.189  Sum_probs=93.9

Q ss_pred             HHHHHHhcCCHHHHHHHHHcCCCCCcccccChhH-HHHHHhCcHHHHHHHHHcCCCCccchhHHHHHHhcCcHHHHH---
Q 004504           83 ALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFAT-TIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAE---  158 (748)
Q Consensus        83 ~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~~l-~~A~~~g~~~iv~~Ll~~ga~~~~~~~~l~~A~~~g~~~~v~---  158 (748)
                      .|..|++.+-+.|.+++-+...+-   -...+.| ..||+..+.|||+|.-+ ...+....+.+..|....+.++..   
T Consensus        49 Ll~HAVk~nmL~ILqkyke~L~~~---~~~~q~LFElAC~~qkydiV~WI~q-nL~i~~~~~iFdIA~~~kDlsLyslGY  124 (192)
T PF03158_consen   49 LLYHAVKYNMLSILQKYKEDLENE---RYLNQELFELACEEQKYDIVKWIGQ-NLHIYNPEDIFDIAFAKKDLSLYSLGY  124 (192)
T ss_pred             HHHHHHHcCcHHHHHHHHHHhhcc---hhHHHHHHHHHHHHccccHHHHHhh-ccCCCCchhhhhhhhhccchhHHHHHH
Confidence            566999999999999988764322   1123345 78999999999999833 333444556677788888776521   


Q ss_pred             -HHhcCCCCC-----CCccccHHHHHhhcCCHHHHHHHHHCCCCCccchhhhhhhcCCcccCCCCCCHHHHHHHcCCHHH
Q 004504          159 -LLMGSDLIR-----PHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSV  232 (748)
Q Consensus       159 -~Ll~~~~~~-----~~~~~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~i  232 (748)
                       ++++.....     ...-..-|..|+..|-++.+...+++|-+++.                   ++|..|+..++-.+
T Consensus       125 ~l~~~~~~~~~~~d~~~ll~~hl~~a~~kgll~F~letlkygg~~~~-------------------~vls~Av~ynhRkI  185 (192)
T PF03158_consen  125 KLLFNRMMSEHNEDPTSLLTQHLEKAAAKGLLPFVLETLKYGGNVDI-------------------IVLSQAVKYNHRKI  185 (192)
T ss_pred             HHHHhhcccccccCHHHHHHHHHHHHHHCCCHHHHHHHHHcCCcccH-------------------HHHHHHHHhhHHHH
Confidence             112221111     11112347899999999999999999987753                   56999999999999


Q ss_pred             HHHHHH
Q 004504          233 VQLLLQ  238 (748)
Q Consensus       233 v~~Ll~  238 (748)
                      +.+++.
T Consensus       186 L~yfi~  191 (192)
T PF03158_consen  186 LDYFIR  191 (192)
T ss_pred             HHHhhc
Confidence            999874

These proteins may be involved in promoting survival of infected macrophages [].

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=96.52  E-value=0.022  Score=51.96  Aligned_cols=46  Identities=20%  Similarity=0.146  Sum_probs=30.3

Q ss_pred             HHHHHhhcCCHHHHHHHHHCCCCCccchhhhhhhcCCcccCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 004504          174 SLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQA  239 (748)
Q Consensus       174 ~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~  239 (748)
                      .|.-|+...+.+-+.-++...-     +               -+++|.+|+.++..+++-+|+.+
T Consensus       156 sledAV~AsN~~~i~~~VtdKk-----d---------------A~~Am~~si~~~K~dva~~lls~  201 (284)
T PF06128_consen  156 SLEDAVKASNYEEISNLVTDKK-----D---------------AHQAMWLSIGNAKEDVALYLLSK  201 (284)
T ss_pred             cHHHHHhhcCHHHHHHHhcchH-----H---------------HHHHHHHHhcccHHHHHHHHHhh
Confidence            3666777777777666654221     1               34677777877777888888765

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PLN03218 maturation of RBCL 1; Provisional

Probab=96.45  E-value=1.5  Score=52.50  Aligned_cols=82  Identities=13%  Similarity=0.142  Sum_probs=46.4

Q ss_pred             HHHHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHHHhhhcCCCCCCCchHHHHHHhcC---CHHHHHHHHhC
Q 004504          490 VEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRG---DLDAVRLLTSR  566 (748)
Q Consensus       490 ~~~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~L~~A~~~~---~~~~v~~Ll~~  566 (748)
                      ..+++.+++.|..++....  .+.|-..+..+..+.+..++...+......+..-.+.|..+...-   -..+++...+.
T Consensus       832 l~lf~eM~~~Gi~Pd~~T~--~~vL~cl~~~~~~~~~~~m~~~m~~~~~~~~~~~y~~Li~g~~~~~~~A~~l~~em~~~  909 (1060)
T PLN03218        832 LMVYRETISAGTLPTMEVL--SQVLGCLQLPHDATLRNRLIENLGISADSQKQSNLSTLVDGFGEYDPRAFSLLEEAASL  909 (1060)
T ss_pred             HHHHHHHHHCCCCCCHHHH--HHHHHHhcccccHHHHHHHHHHhccCCCCcchhhhHHHHHhhccChHHHHHHHHHHHHc
Confidence            3456667777877764332  222322233455666777777766666655555556666554221   23455556667


Q ss_pred             CCCCCCC
Q 004504          567 GYGVNVP  573 (748)
Q Consensus       567 g~d~n~~  573 (748)
                      |.-++..
T Consensus       910 Gi~p~~~  916 (1060)
T PLN03218        910 GVVPSVS  916 (1060)
T ss_pred             CCCCCcc
Confidence            8877764

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=96.32  E-value=0.04  Score=49.02  Aligned_cols=45  Identities=18%  Similarity=0.278  Sum_probs=26.9

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHH
Q 004504          343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLA  393 (748)
Q Consensus       343 ~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll  393 (748)
                      -|..|+..|-...+...+++|.+++.      ++|..|+..++..++.+++
T Consensus       146 hl~~a~~kgll~F~letlkygg~~~~------~vls~Av~ynhRkIL~yfi  190 (192)
T PF03158_consen  146 HLEKAAAKGLLPFVLETLKYGGNVDI------IVLSQAVKYNHRKILDYFI  190 (192)
T ss_pred             HHHHHHHCCCHHHHHHHHHcCCcccH------HHHHHHHHhhHHHHHHHhh
Confidence            35556666666666666666655532      5666666666666666554

These proteins may be involved in promoting survival of infected macrophages [].

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=96.23  E-value=0.0063  Score=61.99  Aligned_cols=65  Identities=23%  Similarity=0.316  Sum_probs=30.9

Q ss_pred             HHHHHHHHhCCCCCCCCccC---CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHHHH
Q 004504          317 TGAVAVLLSCGADAQCPIRT---QKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISA  381 (748)
Q Consensus       317 ~~~v~~Ll~~g~~~~~~~~~---~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~  381 (748)
                      ...|++|.+++.+.|.....   +....|+||+|+..|..++|.+||+.|+|+...|..|+||...+.
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence            44455555555444322111   123344555555555555555555555555555555555555443

>PLN03218 maturation of RBCL 1; Provisional

Probab=95.02  E-value=11  Score=45.31  Aligned_cols=83  Identities=12%  Similarity=-0.078  Sum_probs=38.3

Q ss_pred             HHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHHhcCCCCchhHHHHHHHHH
Q 004504          558 DAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLIS-NGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVA  636 (748)
Q Consensus       558 ~~v~~Ll~~g~d~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~-~gad~~~~~~~g~t~L~~A~~~~~~~~~~~~~~~~~~~  636 (748)
                      .+.+.+++.|..++...-  .+.|-.-+..+..+..+.+++ .+..+...+..-.+.|..+...  .... -.    .+.
T Consensus       833 ~lf~eM~~~Gi~Pd~~T~--~~vL~cl~~~~~~~~~~~m~~~m~~~~~~~~~~~y~~Li~g~~~--~~~~-A~----~l~  903 (1060)
T PLN03218        833 MVYRETISAGTLPTMEVL--SQVLGCLQLPHDATLRNRLIENLGISADSQKQSNLSTLVDGFGE--YDPR-AF----SLL  903 (1060)
T ss_pred             HHHHHHHHCCCCCCHHHH--HHHHHHhcccccHHHHHHHHHHhccCCCCcchhhhHHHHHhhcc--ChHH-HH----HHH
Confidence            445556666766653221  112211123344555555554 5555555555445555554421  1100 11    344


Q ss_pred             HHHHhCCCCcccc
Q 004504          637 RMLVLGGGHVLKH  649 (748)
Q Consensus       637 ~~Ll~~ga~~~~~  649 (748)
                      +.....|.-++..
T Consensus       904 ~em~~~Gi~p~~~  916 (1060)
T PLN03218        904 EEAASLGVVPSVS  916 (1060)
T ss_pred             HHHHHcCCCCCcc
Confidence            5556677666654

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=94.97  E-value=0.041  Score=42.41  Aligned_cols=51  Identities=22%  Similarity=0.295  Sum_probs=41.2

Q ss_pred             chhhH-HHHHHHhcCCHHHHHHhhcCCCCCccccccccccchhhhhhhccCCCcccchhhhcccCCchHHHHHHhcCCHH
Q 004504           16 AEVSQ-RLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEVVLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVT   94 (748)
Q Consensus        16 ~~~~~-~l~~A~~~G~~~~v~~ll~~~~~d~n~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~   94 (748)
                      .++++ .+..|+.+||.|+++.+++.+.++                                    ...+..|+...+-+
T Consensus         3 ~~It~~tl~~Ai~GGN~eII~~c~~~~~~~------------------------------------~~~l~~AI~~H~n~   46 (76)
T PF11929_consen    3 AKITKKTLEYAIIGGNFEIINICLKKNKPD------------------------------------NDCLEYAIKSHNNE   46 (76)
T ss_pred             CccCHHHHHHHHhCCCHHHHHHHHHHhccH------------------------------------HHHHHHHHHHhhHH
Confidence            34444 456699999999999999766322                                    45799999999999


Q ss_pred             HHHHHHHc
Q 004504           95 LVKKLLST  102 (748)
Q Consensus        95 iv~~Ll~~  102 (748)
                      ++++|++.
T Consensus        47 i~~~l~~~   54 (76)
T PF11929_consen   47 IADWLIEN   54 (76)
T ss_pred             HHHHHHHh
Confidence            99999997

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional

Probab=94.46  E-value=12  Score=43.24  Aligned_cols=111  Identities=13%  Similarity=0.154  Sum_probs=49.3

Q ss_pred             hHHHHHHhcCCHHHHHHHHHcCCCCCcccccChhHHHHHHhCcHHH----HHHHHHcCCCCccc-h-hHHHHHHhcCcHH
Q 004504           82 TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEI----LEILLKAGASQPAC-E-EALLEASCHGQAR  155 (748)
Q Consensus        82 t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~~l~~A~~~g~~~i----v~~Ll~~ga~~~~~-~-~~l~~A~~~g~~~  155 (748)
                      +.+..-++.|..+-+..+++.-..+|.... ..-+..-++.|+.+-    .+-+++.|..++.. . ..+..++..|..+
T Consensus       163 ~Li~~y~k~g~~~~A~~lf~~m~~~~~~t~-n~li~~~~~~g~~~~A~~lf~~M~~~g~~p~~~t~~~ll~a~~~~~~~~  241 (697)
T PLN03081        163 RVLLMHVKCGMLIDARRLFDEMPERNLASW-GTIIGGLVDAGNYREAFALFREMWEDGSDAEPRTFVVMLRASAGLGSAR  241 (697)
T ss_pred             HHHHHHhcCCCHHHHHHHHhcCCCCCeeeH-HHHHHHHHHCcCHHHHHHHHHHHHHhCCCCChhhHHHHHHHHhcCCcHH
Confidence            344455566777776666665544433211 112233445555432    23333445444321 1 2233333444444


Q ss_pred             HHHHH----hcCCCCCCCccccH-HHHHhhcCCHHHHHHHHHC
Q 004504          156 LAELL----MGSDLIRPHVAVHS-LVTACCRGFVDVVDTLMKC  193 (748)
Q Consensus       156 ~v~~L----l~~~~~~~~~~~t~-L~~A~~~g~~~~v~~Ll~~  193 (748)
                      ..+.+    ...+...+..-.+. +..-++.|.++-+..+++.
T Consensus       242 ~~~~l~~~~~~~g~~~d~~~~n~Li~~y~k~g~~~~A~~vf~~  284 (697)
T PLN03081        242 AGQQLHCCVLKTGVVGDTFVSCALIDMYSKCGDIEDARCVFDG  284 (697)
T ss_pred             HHHHHHHHHHHhCCCccceeHHHHHHHHHHCCCHHHHHHHHHh
Confidence            33333    33333333222233 3344556676666666654

>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional

Probab=93.77  E-value=17  Score=42.19  Aligned_cols=185  Identities=11%  Similarity=0.104  Sum_probs=87.2

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCCCccccCCCCChHHHH-HHHcCCHH----HHHHHHHCCCCCccCCCCCCcHHHHHHHc
Q 004504          446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMV-AASKGHVE----VFRELVYAGADVKLLNKSGKTAIMLSELN  520 (748)
Q Consensus       446 ~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~-A~~~~~~~----~v~~Ll~~gad~~~~~~~g~t~L~~A~~~  520 (748)
                      .+..-++.|+.+-...+++.-. .   +|..-++.|.. -++.|+.+    +++.+.+.|..+|....  .+.|...+..
T Consensus       366 Li~~y~k~G~~~~A~~vf~~m~-~---~d~~t~n~lI~~y~~~G~~~~A~~lf~~M~~~g~~Pd~~T~--~~ll~a~~~~  439 (697)
T PLN03081        366 LVDLYSKWGRMEDARNVFDRMP-R---KNLISWNALIAGYGNHGRGTKAVEMFERMIAEGVAPNHVTF--LAVLSACRYS  439 (697)
T ss_pred             HHHHHHHCCCHHHHHHHHHhCC-C---CCeeeHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHH--HHHHHHHhcC
Confidence            4455567788887777776532 1   23333444443 34556543    45555566776654331  1223333345


Q ss_pred             CChhHHHHHHHHHhhhcC-CCCCCCc-hHHHHHHhcCCHHHHHHHHh-CCCCCCCCCCCCCcHHHHHH-HcCCHHHHHHH
Q 004504          521 QNCDLFEKVMLEFALEKG-NRNAGGF-YALHCAARRGDLDAVRLLTS-RGYGVNVPDGDGYTPLMLAA-REGHGPMCELL  596 (748)
Q Consensus       521 ~~~~~~~~ll~~~~~~~~-~~~~~g~-t~L~~A~~~~~~~~v~~Ll~-~g~d~n~~d~~g~tpL~~A~-~~~~~~~v~~L  596 (748)
                      |..+-...++........ ..+..-+ ..+..-++.|.++-+.-+++ .+..++.   .-++.|..|+ ..|+.+..+..
T Consensus       440 g~~~~a~~~f~~m~~~~g~~p~~~~y~~li~~l~r~G~~~eA~~~~~~~~~~p~~---~~~~~Ll~a~~~~g~~~~a~~~  516 (697)
T PLN03081        440 GLSEQGWEIFQSMSENHRIKPRAMHYACMIELLGREGLLDEAYAMIRRAPFKPTV---NMWAALLTACRIHKNLELGRLA  516 (697)
T ss_pred             CcHHHHHHHHHHHHHhcCCCCCccchHhHHHHHHhcCCHHHHHHHHHHCCCCCCH---HHHHHHHHHHHHcCCcHHHHHH
Confidence            566555555544322111 1111112 23445567787765555554 3333332   2244555554 67888776666


Q ss_pred             HhCCCCCCCCCCCCCcHHHH-HHhcCCCCchhHHHHHHHHHHHHHhCCCC
Q 004504          597 ISNGAVCDIKNARGETALSL-ARKNSSMKNDAELVILDEVARMLVLGGGH  645 (748)
Q Consensus       597 l~~gad~~~~~~~g~t~L~~-A~~~~~~~~~~~~~~~~~~~~~Ll~~ga~  645 (748)
                      .+.-..+...+....+.|.- -+..|.+ +.+.     ++.+.+.+.|..
T Consensus       517 ~~~l~~~~p~~~~~y~~L~~~y~~~G~~-~~A~-----~v~~~m~~~g~~  560 (697)
T PLN03081        517 AEKLYGMGPEKLNNYVVLLNLYNSSGRQ-AEAA-----KVVETLKRKGLS  560 (697)
T ss_pred             HHHHhCCCCCCCcchHHHHHHHHhCCCH-HHHH-----HHHHHHHHcCCc
Confidence            55322222112222333332 2333332 2222     566667777753

>PLN03077 Protein ECB2; Provisional

Probab=92.82  E-value=26  Score=41.73  Aligned_cols=141  Identities=13%  Similarity=0.133  Sum_probs=68.2

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCCCccccCCCCChHHH-HHHHcCCHH----HHHHHHHCCCCCccCCCCCCcHHHHH-HH
Q 004504          446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVM-VAASKGHVE----VFRELVYAGADVKLLNKSGKTAIMLS-EL  519 (748)
Q Consensus       446 ~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~-~A~~~~~~~----~v~~Ll~~gad~~~~~~~g~t~L~~A-~~  519 (748)
                      .+..-++.|+.+-...+++..     ..|...++.+. ..+..|..+    +++.+.+.|..+|....   +.+..| +.
T Consensus       530 Li~~y~k~G~~~~A~~~f~~~-----~~d~~s~n~lI~~~~~~G~~~~A~~lf~~M~~~g~~Pd~~T~---~~ll~a~~~  601 (857)
T PLN03077        530 LLDLYVRCGRMNYAWNQFNSH-----EKDVVSWNILLTGYVAHGKGSMAVELFNRMVESGVNPDEVTF---ISLLCACSR  601 (857)
T ss_pred             HHHHHHHcCCHHHHHHHHHhc-----CCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCcccH---HHHHHHHhh
Confidence            445556677777766666542     22332333333 334566654    44445566776664432   233333 33


Q ss_pred             cCChhHHHHHHHHHhhhcC-CCCCCCc-hHHHHHHhcCCHHHHHHHHhC-CCCCCCCCCCCCcHHHHHHH-cCCHHHHHH
Q 004504          520 NQNCDLFEKVMLEFALEKG-NRNAGGF-YALHCAARRGDLDAVRLLTSR-GYGVNVPDGDGYTPLMLAAR-EGHGPMCEL  595 (748)
Q Consensus       520 ~~~~~~~~~ll~~~~~~~~-~~~~~g~-t~L~~A~~~~~~~~v~~Ll~~-g~d~n~~d~~g~tpL~~A~~-~~~~~~v~~  595 (748)
                      .|..+-...++........ ..+..-. ..+..-++.|.++-..-+++. ...+   |..-+++|.-|+. +++.++.+.
T Consensus       602 ~g~v~ea~~~f~~M~~~~gi~P~~~~y~~lv~~l~r~G~~~eA~~~~~~m~~~p---d~~~~~aLl~ac~~~~~~e~~e~  678 (857)
T PLN03077        602 SGMVTQGLEYFHSMEEKYSITPNLKHYACVVDLLGRAGKLTEAYNFINKMPITP---DPAVWGALLNACRIHRHVELGEL  678 (857)
T ss_pred             cChHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHhCCCHHHHHHHHHHCCCCC---CHHHHHHHHHHHHHcCChHHHHH
Confidence            4555554444443321111 1111111 223344567777666655554 3333   3344566666664 567775554


Q ss_pred             HH
Q 004504          596 LI  597 (748)
Q Consensus       596 Ll  597 (748)
                      ..
T Consensus       679 ~a  680 (857)
T PLN03077        679 AA  680 (857)
T ss_pred             HH
Confidence            43

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=92.72  E-value=0.18  Score=38.78  Aligned_cols=48  Identities=17%  Similarity=0.225  Sum_probs=36.4

Q ss_pred             ccHHHHHhhcCCHHHHHHHHHCCCCCccchhhhhhhcCCcccCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 004504          172 VHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQA  239 (748)
Q Consensus       172 ~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~  239 (748)
                      ...+..|+.+|+.|+++.+++.+ .++                   ...+..|+...+.+++++|+++
T Consensus         7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~-------------------~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    7 KKTLEYAIIGGNFEIINICLKKN-KPD-------------------NDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHh-ccH-------------------HHHHHHHHHHhhHHHHHHHHHh
Confidence            34578888888888888888755 222                   2358888888889999998887

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PLN03077 Protein ECB2; Provisional

Probab=89.07  E-value=57  Score=38.90  Aligned_cols=289  Identities=11%  Similarity=0.003  Sum_probs=126.2

Q ss_pred             HHHHHHHcCCHHHH----HHHHhCCCCCCCCccCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcHHHH-HH
Q 004504          307 LLHHAILCGCTGAV----AVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMI-SA  381 (748)
Q Consensus       307 ~L~~A~~~g~~~~v----~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~-A~  381 (748)
                      .+...+..|+.+..    ..+.+.|..++.     ....+.+..-++.|..+-+..+++.-..   +|..-++.+.. -+
T Consensus       294 ll~a~~~~g~~~~a~~l~~~~~~~g~~~d~-----~~~n~Li~~y~k~g~~~~A~~vf~~m~~---~d~~s~n~li~~~~  365 (857)
T PLN03077        294 VISACELLGDERLGREMHGYVVKTGFAVDV-----SVCNSLIQMYLSLGSWGEAEKVFSRMET---KDAVSWTAMISGYE  365 (857)
T ss_pred             HHHHHHhcCChHHHHHHHHHHHHhCCccch-----HHHHHHHHHHHhcCCHHHHHHHHhhCCC---CCeeeHHHHHHHHH
Confidence            44444555665433    334445555442     2334456666677777777666664222   22223333333 33


Q ss_pred             HcCCHH----HHHHHHHcCCCCCccccCCCChhhhhhccccccchHHHHHHHHHcCCCCCCCCCCCCcHHHHHHHcCCHH
Q 004504          382 KYKQEE----CVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIA  457 (748)
Q Consensus       382 ~~~~~~----~v~~Ll~~ga~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~  457 (748)
                      +.|+.+    +.+.+.+.|..++...  -.+.+...+.......-.++.....+.|..++..-  ..+.+...++.|+.+
T Consensus       366 ~~g~~~~A~~lf~~M~~~g~~Pd~~t--~~~ll~a~~~~g~~~~a~~l~~~~~~~g~~~~~~~--~n~Li~~y~k~g~~~  441 (857)
T PLN03077        366 KNGLPDKALETYALMEQDNVSPDEIT--IASVLSACACLGDLDVGVKLHELAERKGLISYVVV--ANALIEMYSKCKCID  441 (857)
T ss_pred             hCCCHHHHHHHHHHHHHhCCCCCcee--HHHHHHHHhccchHHHHHHHHHHHHHhCCCcchHH--HHHHHHHHHHcCCHH
Confidence            445543    3333334455443321  01112212222222223334444445554433211  112344456667777


Q ss_pred             HHHHHHhcCCCCccccCCCCChHHHHH-HHcCCHH----HHHHHHHCCCCCccCCCCCCcHHHHHHHcCChhHHHHHHHH
Q 004504          458 ALKALIGREELNLDYQDDNGFSAVMVA-ASKGHVE----VFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLE  532 (748)
Q Consensus       458 ~v~~Ll~~~~~~~~~~~~~g~t~L~~A-~~~~~~~----~v~~Ll~~gad~~~~~~~g~t~L~~A~~~~~~~~~~~ll~~  532 (748)
                      -...+++.-.    .+|...++.+..+ +..|..+    +++.+++ +..+|....  .+.|...+..|..+..+.+...
T Consensus       442 ~A~~vf~~m~----~~d~vs~~~mi~~~~~~g~~~eA~~lf~~m~~-~~~pd~~t~--~~lL~a~~~~g~l~~~~~i~~~  514 (857)
T PLN03077        442 KALEVFHNIP----EKDVISWTSIIAGLRLNNRCFEALIFFRQMLL-TLKPNSVTL--IAALSACARIGALMCGKEIHAH  514 (857)
T ss_pred             HHHHHHHhCC----CCCeeeHHHHHHHHHHCCCHHHHHHHHHHHHh-CCCCCHhHH--HHHHHHHhhhchHHHhHHHHHH
Confidence            6666665431    1222233333332 3344432    2222222 222222111  1223333344555544444322


Q ss_pred             ---HhhhcCCCCCCCchHHHHHHhcCCHHHHHHHHhCCCCCCCCCCCCCcHHHHH-HHcCCHH----HHHHHHhCCCCCC
Q 004504          533 ---FALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLA-AREGHGP----MCELLISNGAVCD  604 (748)
Q Consensus       533 ---~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~d~n~~d~~g~tpL~~A-~~~~~~~----~v~~Ll~~gad~~  604 (748)
                         .+...+  ...+...+..-++.|+++-...+.+.-    .+|..-++.|..+ ++.|+.+    +.+.+.+.|..||
T Consensus       515 ~~~~g~~~~--~~~~naLi~~y~k~G~~~~A~~~f~~~----~~d~~s~n~lI~~~~~~G~~~~A~~lf~~M~~~g~~Pd  588 (857)
T PLN03077        515 VLRTGIGFD--GFLPNALLDLYVRCGRMNYAWNQFNSH----EKDVVSWNILLTGYVAHGKGSMAVELFNRMVESGVNPD  588 (857)
T ss_pred             HHHhCCCcc--ceechHHHHHHHHcCCHHHHHHHHHhc----CCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCC
Confidence               122111  112234455556777776666555542    3344445555544 4567654    4444455777776


Q ss_pred             CCCCCCCcHHHHHHhcCCC
Q 004504          605 IKNARGETALSLARKNSSM  623 (748)
Q Consensus       605 ~~~~~g~t~L~~A~~~~~~  623 (748)
                      ...   .+.|..|+...+.
T Consensus       589 ~~T---~~~ll~a~~~~g~  604 (857)
T PLN03077        589 EVT---FISLLCACSRSGM  604 (857)
T ss_pred             ccc---HHHHHHHHhhcCh
Confidence            544   4455556555443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	748
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		5e-21
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		6e-04
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		3e-17
2xee_A	157	Structural Determinants For Improved Thermal Stabil		2e-16
2xee_A	157	Structural Determinants For Improved Thermal Stabil		4e-13
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-16
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		3e-16
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		1e-12
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		3e-16
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-15
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		6e-15
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		3e-13
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		5e-14
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		8e-14
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		1e-09
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		3e-13
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		6e-06
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		3e-13
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		5e-11
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		4e-13
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		5e-13
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		3e-09
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		2e-12
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		3e-12
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		4e-12
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		1e-07
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		4e-12
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		1e-11
4g8k_A	337	Intact Sensor Domain Of Human Rnase L In The Inacti		1e-11
1wdy_A	285	Crystal Structure Of Ribonuclease Length = 285		2e-11
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		2e-11
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		2e-11
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		2e-07
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		2e-11
1uoh_A	226	Human Gankyrin Length = 226		3e-11
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		3e-11
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		5e-11
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		1e-10
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		4e-04
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		3e-11
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		4e-07
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		4e-11
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		7e-11
1bi8_B	166	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		7e-11
1bd8_A	156	Structure Of Cdk Inhibitor P19ink4d Length = 156		8e-11
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		9e-11
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		2e-10
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		1e-09
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		4e-10
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		8e-08
2xen_A	91	Structural Determinants For Improved Thermal Stabil		7e-10
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		1e-09
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		3e-09
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		1e-09
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		2e-09
1blx_B	166	P19ink4dCDK6 COMPLEX Length = 166		4e-09
1ap7_A	168	P19-Ink4d From Mouse, Nmr, 20 Structures Length = 1		4e-09
1mx4_A	168	Structure Of P18ink4c (F82q) Length = 168		5e-09
1mx6_A	168	Structure Of P18ink4c (F92n) Length = 168		7e-09
4hbd_A	276	Crystal Structure Of Kank2 Ankyrin Repeats Length =		1e-08
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		1e-08
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		9e-07
1ihb_A	162	Crystal Structure Of P18-Ink4c(Ink6) Length = 162		1e-08
1bu9_A	168	Solution Structure Of P18-Ink4c, 21 Structures Leng		1e-08
2dzn_A	228	Crystal Structure Analysis Of Yeast Nas6p Complexed		2e-08
1ixv_A	231	Crystal Structure Analysis Of Homolog Of Oncoprotei		2e-08
3eu9_A	240	The Ankyrin Repeat Domain Of Huntingtin Interacting		2e-08
1wg0_A	243	Structural Comparison Of Nas6p Protein Structures I		2e-08
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		3e-08
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		2e-07
3hra_A	201	Crystal Structure Of Ef0377 An Ankyrin Repeat Prote		4e-08
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		5e-08
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		5e-07
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		1e-07
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		3e-07
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		1e-07
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		2e-07
1mx2_A	168	Structure Of F71n Mutant Of P18ink4c Length = 168		2e-07
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		2e-07
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		3e-07
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		3e-07
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		5e-05
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		4e-07
3v2o_A	183	Crystal Structure Of The Peptide Bound Complex Of T		5e-07
3so8_A	162	Crystal Structure Of Ankra Length = 162		5e-07
3v2x_A	167	Crystal Structure Of The Peptide Bound Complex Of T		5e-07
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		6e-07
2fo1_E	373	Crystal Structure Of The Csl-Notch-Mastermind Terna		6e-07
2fo1_E	373	Crystal Structure Of The Csl-Notch-Mastermind Terna		2e-06
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		7e-07
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		9e-05
2zgg_A	92	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		8e-07
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		8e-07
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		1e-06
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		1e-06
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		1e-06
1myo_A	118	Solution Structure Of Myotrophin, Nmr, 44 Structure		1e-06
3v30_A	172	Crystal Structure Of The Peptide Bound Complex Of T		3e-06
2zgd_A	110	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		3e-06
3aaa_C	123	Crystal Structure Of Actin Capping Protein In Compl		4e-06
3f6q_A	179	Crystal Structure Of Integrin-Linked Kinase Ankyrin		6e-06
2kbx_A	171	Solution Structure Of Ilk-Pinch Complex Length = 17		6e-06
1d9s_A	136	Tumor Suppressor P15(Ink4b) Structure By Comparativ		8e-06
1k1b_A	241	Crystal Structure Of The Ankyrin Repeat Domain Of B		1e-05
1k1b_A	241	Crystal Structure Of The Ankyrin Repeat Domain Of B		8e-04
3uxg_A	172	Crystal Structure Of Rfxank Length = 172		1e-05
1ikn_D	236	IkappabalphaNF-Kappab Complex Length = 236		2e-05
1nfi_E	213	I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213		2e-05
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		3e-05
3lvq_E	497	The Crystal Structure Of Asap3 In Complex With Arf6		4e-05
4a63_B	239	Crystal Structure Of The P73-Aspp2 Complex At 2.6a		4e-05
2b0o_E	301	Crystal Structure Of Uplc1 Gap Domain Length = 301		6e-05
1ycs_B	239	P53-53bp2 Complex Length = 239		6e-05
3d9h_A	285	Crystal Structure Of The Splice Variant Of Human As		6e-05
1ot8_A	239	Structure Of The Ankyrin Domain Of The Drosophila N		1e-04
1ot8_A	239	Structure Of The Ankyrin Domain Of The Drosophila N		2e-04
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		1e-04
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		8e-04
2rfa_A	232	Crystal Structure Of The Mouse Trpv6 Ankyrin Repeat		3e-04

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score = 99.8 bits (247), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 165/366 (45%), Gaps = 35/366 (9%)
Query: 305 RTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGC 364
            T LH A   G T     LL   A      +  +T   P+H AAR+G++ +V+ L+++  
Sbjct: 48  ETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQT---PLHCAARIGHTNMVKLLLENNA 104
Query: 365 DLNTKTESGETALMISAKYKQEECVKVL----------AKAG-------ADFGLVSVSG- 406
           + N  T +G T L I+A+    E V  L           K G       A +G V V+  
Sbjct: 105 NPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAEL 164
Query: 407 ----QSASSIAGSNWWS---VGFQRAVLDIIR----SGNIPKSSNVAVFSPLMFVAQAGD 455
                +  + AG N  +   V      LDI++     G  P S     ++PL   A+   
Sbjct: 165 LLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQ 224
Query: 456 IAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIM 515
           +   ++L+ +   + + +   G + + +AA +GH E+   L+   A+  L NKSG T + 
Sbjct: 225 VEVARSLL-QYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLH 283
Query: 516 LSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDG 575
           L     +  + + V+++  +        G+  LH A+  G++  V+ L      VN    
Sbjct: 284 LVAQEGHVPVAD-VLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTK 342
Query: 576 DGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMK-NDAELVILDE 634
            GY+PL  AA++GH  +  LL+ NGA  +  ++ G T L++A++   +   D   V+ DE
Sbjct: 343 LGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDE 402
Query: 635 VARMLV 640
            + +LV
Sbjct: 403 TSFVLV 408

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 1/108 (0%)
Query: 548 LHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKN 607
           LH A+  G L  V+ L  RG   NV +    TPL +AAR GH  + + L+ N A  + K 
Sbjct: 18  LHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKA 77
Query: 608 ARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKG 655
              +T L  A +     N  +L++ +     L    GH   H    +G
Sbjct: 78  KDDQTPLHCAAR-IGHTNMVKLLLENNANPNLATTAGHTPLHIAAREG 124

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 51/126 (40%), Positives = 76/126 (60%), Gaps = 1/126 (0%)
Query: 476 NGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFAL 535
           NG + + +AA  GH+EV + L+ AGADV   +K+G+T + L+  N + ++  K++LE   
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVV-KLLLEAGA 59
Query: 536 EKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCEL 595
           +   ++  G   LH AAR G L+ V+LL   G  VN  D +G TPL LAAR GH  + +L
Sbjct: 60  DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKL 119
Query: 596 LISNGA 601
           L+  GA
Sbjct: 120 LLEAGA 125

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/142 (36%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA  G  +  R L+  GADV   +K G T + L+    + ++ E V+L+   +   +
Sbjct: 6   LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVE-VLLKAGADVNAK 64
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           +  G+  LH AAR G L+ V +L   G  VN  D DGYTPL LAAREGH  + E+L+  G
Sbjct: 65  DKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAG 124
Query: 601 AVCDIKNARGETALSLARKNSS 622
           A  + ++  G+T   LA  N +
Sbjct: 125 ADVNAQDKFGKTPFDLAIDNGN 146

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 61/118 (51%), Gaps = 11/118 (9%)
Query: 540 RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISN 599
           ++  G+  LH AAR G L+ V +L   G  VN  D DGYTPL LAAREGH  + E+L+  
Sbjct: 31  KDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKA 90
Query: 600 GAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTP 657
           GA  + K+  G T L LA +   +          E+  +L+  G  V    K GK TP
Sbjct: 91  GADVNAKDKDGYTPLHLAAREGHL----------EIVEVLLKAGADVNAQDKFGK-TP 137

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 11/164 (6%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA  G+ +  ++L+  GADV   +  GKT + L+  N + ++  K++L    +   +
Sbjct: 8   LIEAAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVV-KLLLSQGADPNAK 66
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           ++ G   LH AA  G  + V+LL S+G   N  D DG TPL LAA  GH  + +LL+S G
Sbjct: 67  DSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQG 126
Query: 601 AVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGG 644
           A  +  ++ G T L LAR++ +          +EV ++L   GG
Sbjct: 127 ADPNTSDSDGRTPLDLAREHGN----------EEVVKLLEKQGG 160

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA  G  +  R L+  GADV   +K G T + L+    + ++ E V+L+   +   +
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVE-VLLKAGADVNAK 76
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           +  G+  LH AAR G L+ V +L   G  VN  D DGYTPL LAAREGH  + E+L+  G
Sbjct: 77  DKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAG 136
Query: 601 AVCDIKNARGETALSLARKNSS 622
           A  + ++  G+TA  ++  N +
Sbjct: 137 ADVNAQDKFGKTAFDISIDNGN 158

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Query: 540 RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISN 599
           ++  G+  LH AAR G L+ V +L   G  VN  D DGYTPL LAAREGH  + E+L+  
Sbjct: 43  KDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKA 102
Query: 600 GAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGK 654
           GA  + K+  G T L LA +   +          E+  +L+  G  V    K GK
Sbjct: 103 GADVNAKDKDGYTPLHLAAREGHL----------EIVEVLLKAGADVNAQDKFGK 147

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 11/164 (6%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA  G+ +  ++L+  GADV   +  G+T +  +    + ++  K+++    +   +
Sbjct: 8   LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIV-KLLISKGADVNAK 66
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           ++ G   LH AA+ G  + V+LL S+G  VN  D DG TPL  AA+EGH  + +LLIS G
Sbjct: 67  DSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKG 126
Query: 601 AVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGG 644
           A  +  ++ G T L LAR++ +          +E+ ++L   GG
Sbjct: 127 ADVNTSDSDGRTPLDLAREHGN----------EEIVKLLEKQGG 160

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 87/164 (53%), Gaps = 11/164 (6%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA  G+ +  ++L+  GADV   +  G+T +  +  N + ++  K+++    +   +
Sbjct: 8   LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVV-KLLISKGADVNAK 66
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           ++ G   LH AA  G  + V+LL S+G  VN  D DG TPL  AA  GH  + +LLIS G
Sbjct: 67  DSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKG 126
Query: 601 AVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGG 644
           A  +  ++ G T L LAR++ +          +EV ++L   GG
Sbjct: 127 ADVNTSDSDGRTPLDLAREHGN----------EEVVKLLEKQGG 160

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 79.7 bits (195), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 74/128 (57%), Gaps = 1/128 (0%)
Query: 469 NLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEK 528
           +++ +D +G++ + +AA +GH+E+   L+ AGADV   +K G T + L+    + ++ E 
Sbjct: 27  DVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVE- 85
Query: 529 VMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREG 588
           V+L+   +   ++  G+  LH AAR G L+ V +L   G  VN  D  G TP  LA REG
Sbjct: 86  VLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIREG 145
Query: 589 HGPMCELL 596
           H  + E+L
Sbjct: 146 HEDIAEVL 153

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/124 (38%), Positives = 63/124 (50%), Gaps = 11/124 (8%)
Query: 540 RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISN 599
           ++  G+  LH AAR G L+ V +L   G  VN  D DGYTPL LAAREGH  + E+L+  
Sbjct: 31  KDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKA 90
Query: 600 GAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHR 659
           GA  + K+  G T L LA +   +          E+  +L+  G  V    K GK TP  
Sbjct: 91  GADVNAKDKDGYTPLHLAAREGHL----------EIVEVLLKAGADVNAQDKFGK-TPFD 139
Query: 660 KDIR 663
             IR
Sbjct: 140 LAIR 143

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 11/164 (6%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA  G+ +  ++L+  GAD    +  G+T +  +  N + ++  K++L    +   +
Sbjct: 8   LIEAAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIV-KLLLSKGADPNAK 66
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           ++ G   LH AA  G  + V+LL S+G   N  D DG TPL  AA  GH  + +LL+S G
Sbjct: 67  DSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKG 126
Query: 601 AVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGG 644
           A  +  ++ G T L LAR++ +          +E+ ++L   GG
Sbjct: 127 ADPNTSDSDGRTPLDLAREHGN----------EEIVKLLEKQGG 160

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 75.9 bits (185), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA  G  +  R L+  GADV   + +G T + L+    + ++ E V+L+   +   +
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVE-VLLKNGADVNAK 76
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           ++ G   LH AARRG L+ V +L   G  VN  D  G+TPL LAA+ GH  + E+L+ NG
Sbjct: 77  DSLGVTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNG 136
Query: 601 AVCDIKNARGETALSLARKNSS 622
           A  + ++  G+TA  ++  N +
Sbjct: 137 ADVNAQDKFGKTAFDISIDNGN 158

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 540 RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISN 599
           R+  G+  LH AA  G L+ V +L   G  VN  D  G TPL LAAR GH  + E+L+ N
Sbjct: 43  RDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLGVTPLHLAARRGHLEIVEVLLKN 102
Query: 600 GAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGK 654
           GA  +  ++ G T L LA K   +          E+  +L+  G  V    K GK
Sbjct: 103 GADVNASDSHGFTPLHLAAKRGHL----------EIVEVLLKNGADVNAQDKFGK 147

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA  G  +  R L+  GADV   +  G T + L   N + ++ E V+L++A +    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNANDWFGITPLHLVVNNGHLEIIE-VLLKYAADVNAS 76
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           +  G+  LH AA RG L+ V +L   G  VN  D  GYTPL LAA +GH  + E+L+  G
Sbjct: 77  DKSGWTPLHLAAYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYG 136
Query: 601 AVCDIKNARGETALSLARKNSS 622
           A  + ++  G+TA  ++  N +
Sbjct: 137 ADVNAQDKFGKTAFDISIDNGN 158

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 10/111 (9%)
Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC 603
           G   LH     G L+ + +L      VN  D  G+TPL LAA  GH  + E+L+  GA  
Sbjct: 47  GITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLAAYRGHLEIVEVLLKYGADV 106
Query: 604 DIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGK 654
           +  + +G T L LA ++  +          E+  +L+  G  V    K GK
Sbjct: 107 NAMDYQGYTPLHLAAEDGHL----------EIVEVLLKYGADVNAQDKFGK 147

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 103/243 (42%), Gaps = 38/243 (15%)
Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
           P+H AA  G+  I   L+ +G +++T +E   T LM +A+    E VK L KAGA   LV
Sbjct: 14  PLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGA---LV 70
Query: 403 SVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKAL 462
                  S+                                   L   A+ G    ++ L
Sbjct: 71  DPKDAEGSTC----------------------------------LHLAAKKGHYEVVQYL 96
Query: 463 IGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQN 522
           +   +++++ QDD G++ ++ A    HV++ + L+  G+D+ + +      +  +  +  
Sbjct: 97  LSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGC 156
Query: 523 CDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLM 582
            D+ E ++L    +    N  G   LH AAR    D V L  SR   V + + +G TPL 
Sbjct: 157 VDIAE-ILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQ 215
Query: 583 LAA 585
            A+
Sbjct: 216 CAS 218

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 88/180 (48%), Gaps = 3/180 (1%)
Query: 445 SPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGA-DV 503
           +PLM  A+   + A+K LI    L +D +D  G + + +AA KGH EV + L+  G  DV
Sbjct: 46  TPLMEAAENNHLEAVKYLIKAGAL-VDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDV 104
Query: 504 KLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLL 563
              +  G T ++ +   ++ DL  K++L    +   R+      LH AA  G +D   +L
Sbjct: 105 NCQDDGGWTPMIWATEYKHVDLV-KLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEIL 163
Query: 564 TSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSM 623
            +    ++  +  G +PL +AARE       L +S  +   +KN  GET L  A  NS +
Sbjct: 164 LAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQV 223

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 1/142 (0%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA  G  +  R L+  GADV   +  G T + L+  N + ++ E V+L+   +    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVE-VLLKNGADVNAS 76
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           +  G   LH AA  G L+ V +L   G  VN  D DG+TPL LAA+ GH  + E+L+ +G
Sbjct: 77  DLTGITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHG 136
Query: 601 AVCDIKNARGETALSLARKNSS 622
           A  + ++  G+TA  ++  N +
Sbjct: 137 ADVNAQDKFGKTAFDISIDNGN 158

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/112 (41%), Positives = 61/112 (54%), Gaps = 3/112 (2%)
Query: 302 HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLID 361
           HYGRT LH A   G    V VLL  GAD    + T  T   P+HLAA LG+  IV+ L+ 
Sbjct: 33  HYGRTPLHMAAAVGHLEIVEVLLRNGADVNA-VDTNGTT--PLHLAASLGHLEIVEVLLK 89
Query: 362 SGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIA 413
            G D+N K  +G T L ++A +   E V+VL K GAD       G++A  I+
Sbjct: 90  YGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTAFDIS 141

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 69/137 (50%), Gaps = 1/137 (0%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA  G  +  R L+  GAD    +  G+T + ++    + ++ E V+L    +    
Sbjct: 6   LLEAARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVE-VLLRNGADVNAV 64
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           +  G   LH AA  G L+ V +L   G  VN  D  G TPL LAA  GH  + E+L+ +G
Sbjct: 65  DTNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHG 124
Query: 601 AVCDIKNARGETALSLA 617
           A  + ++  G+TA  ++
Sbjct: 125 ADVNAQDKFGKTAFDIS 141

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA  G  +  R L+  GADV  ++ +G T + L+ ++ + ++ E V+L+   +    
Sbjct: 18  LLEAARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVE-VLLKHGADVDAA 76
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           +  GF  LH AA  G L+ V +L   G  VN  D  G TPL LAA EGH  + E+L+  G
Sbjct: 77  DVYGFTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYG 136
Query: 601 AVCDIKNARGETALSLARKNSS 622
           A  + ++  G+TA  ++  N +
Sbjct: 137 ADVNAQDKFGKTAFDISIDNGN 158

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA  G  +  R L+  GADV   + +G T + L+  + + ++ E V+L+   +    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVE-VLLKHGADVDAS 76
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           +  G+  LH AA  G L+ V +L   G  VN  D DG TPL LAA+ G+  + E+L+ +G
Sbjct: 77  DVFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHG 136
Query: 601 AVCDIKNARGETALSLARKNSS 622
           A  + ++  G+TA  ++  N +
Sbjct: 137 ADVNAQDKFGKTAFDISIDNGN 158

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 1/142 (0%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA  G  +  R L+  GADV   +  G T + L+    + ++ E V+L+   +   R
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVE-VLLKHGADVNAR 76
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           +  G+  LH AA  G L+ V +L   G  VN  D  G TPL LAA  GH  + E+L+ +G
Sbjct: 77  DTDGWTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHG 136
Query: 601 AVCDIKNARGETALSLARKNSS 622
           A  + ++  G+TA  ++  N +
Sbjct: 137 ADVNAQDKFGKTAFDISIDNGN 158

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 42/74 (56%)
Query: 551 AARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARG 610
           AAR G  D VR+L + G  VN  D  G TPL LAA  GH  + E+L+ +GA  + ++  G
Sbjct: 21  AARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDG 80
Query: 611 ETALSLARKNSSMK 624
            T L LA  N  ++
Sbjct: 81  WTPLHLAADNGHLE 94

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 31/230 (13%)
Query: 419 SVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGF 478
           S G    VL ++  G     +NV   + L       ++  +K L+     N++  D+ G+
Sbjct: 49  SSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLV-ENGANINQPDNEGW 107
Query: 479 SAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIML-----------SELN-QNCDLF 526
             +  AAS G++++   L+  GA V  +N  G T + +           +E+N Q  D+ 
Sbjct: 108 IPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIE 167
Query: 527 ------EKVMLEFA---LEKGNRN-----AGGFYALHCAARRGDLDAVRLLTSRGYGVNV 572
                 E++ML  A   L  G+ N       G  ALH AA +G  + ++LL    Y VN+
Sbjct: 168 AARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNI 227
Query: 573 PDGDGYTPLMLAAREGHGPMCELLISNGAVCDIK--NARGETALSLARKN 620
            D DG+TPL  AA  G    C +L+ N  +CD++  N  G+TA  +A ++
Sbjct: 228 KDYDGWTPLHAAAHWGKEEACRILVEN--LCDMEAVNKVGQTAFDVADED 275

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 1/142 (0%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA  G  +  R L+  GADV   + SGKT + L+ +  + ++ E V+L+   +    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVE-VLLKHGADVNAA 76
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           +  G   LH AA  G L+ V +L   G  VN  D  G+TPL LAA  GH  + E+L+  G
Sbjct: 77  DKMGDTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYG 136
Query: 601 AVCDIKNARGETALSLARKNSS 622
           A  + ++  G+TA  ++  N +
Sbjct: 137 ADVNAQDKFGKTAFDISIDNGN 158

>pdb|4G8K|A Chain A, Intact Sensor Domain Of Human Rnase L In The Inactive Signaling State Length = 337

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 75/315 (23%), Positives = 135/315 (42%), Gaps = 39/315 (12%)
Query: 295 HLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYST 354
           ++++     G T LH+A+       V +LL  GAD   P+  +K    P  LAA  G   
Sbjct: 50  NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD---PVLRKKNGATPFILAAIAGSVK 106
Query: 355 IVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAG 414
           +++  +  G D+N     G TA M +A Y + + +K L K GA+  L   + +       
Sbjct: 107 LLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQER--- 163
Query: 415 SNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQD 474
                          +R G           + LM  A+ G +  LK L+     +++  D
Sbjct: 164 ---------------LRKGGA---------TALMDAAEKGHVEVLKILLDEMGADVNACD 199
Query: 475 DNGFSAV---MVAASKGHVEVFRELVYA-GADVKLLNKSGKTAIMLSELNQNCDLFEKVM 530
           + G +A+   ++++    VE    L+   GADV +  + GKT ++L+   ++  L ++++
Sbjct: 200 NMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLL 259
Query: 531 LEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHG 590
            +  +E  + ++ G  AL  A          LL  RG   +  D      +M A R    
Sbjct: 260 EQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD-----LVMTARRNYDH 314
Query: 591 PMCELLISNGAVCDI 605
            + ++L+S+GA  D 
Sbjct: 315 SLVKVLLSHGAKEDF 329

>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease Length = 285

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 122/268 (45%), Gaps = 25/268 (9%)
Query: 355 IVQSLIDSGCDLNTKTESGE-TALMISAKYKQEECVKVLAKAGADFGLVSVSGQSA---S 410
           +VQ L++ G ++N + E G  T L  + +  +E+ V++L + GAD  L   +G +    +
Sbjct: 20  LVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLA 79
Query: 411 SIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGR-EELN 469
           +IAGS      F       +  G      +   F+  M  A  G + ALK L  R   +N
Sbjct: 80  AIAGSVKLLKLF-------LSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVN 132
Query: 470 L--DYQDDN------GFSAVMVAASKGHVEVFRELV-YAGADVKLLNKSGKTAI---MLS 517
           L    ++D       G +A+M AA KGHVEV + L+   GADV   +  G+ A+   +LS
Sbjct: 133 LRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLS 192
Query: 518 ELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAV-RLLTSRGYGVNVPDGD 576
             + + +    ++L+   +   R   G   L  A  +  L  V RLL      +N  D D
Sbjct: 193 SDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSD 252
Query: 577 GYTPLMLAAREGHGPMCELLISNGAVCD 604
           G T L+LA       + ELL   GA  D
Sbjct: 253 GKTALLLAVELKLKKIAELLCKRGASTD 280

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 1/142 (0%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA  G  +  R L+  GADV   +  G T + L+    + ++ E V+L+   +    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVE-VLLKNGADVNAD 76
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           ++ G   LH AA RG L+ V +L   G  VN  D +G+TPL LAA  GH  + E+L+ +G
Sbjct: 77  DSLGVTPLHLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHG 136
Query: 601 AVCDIKNARGETALSLARKNSS 622
           A  + ++  G+TA  ++  N +
Sbjct: 137 ADVNAQDKFGKTAFDISIDNGN 158

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 1/142 (0%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA  G  +  R L+  GADV   +  G T + L+    + ++ E V+L++  +    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVE-VLLKYGADVNAW 76
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           +  G   LH AA  G L+ V +L   G  VN  D +G+TPL LAA +GH  + E+L+  G
Sbjct: 77  DNYGATPLHLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYG 136
Query: 601 AVCDIKNARGETALSLARKNSS 622
           A  + ++  G+TA  ++  N +
Sbjct: 137 ADVNAQDKFGKTAFDISIDNGN 158

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/74 (41%), Positives = 42/74 (56%)
Query: 551 AARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARG 610
           AAR G  D VR+L + G  VN  D  G+TPL LAA+ GH  + E+L+  GA  +  +  G
Sbjct: 21  AARAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYG 80
Query: 611 ETALSLARKNSSMK 624
            T L LA  N  ++
Sbjct: 81  ATPLHLAADNGHLE 94

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 473 QDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLE 532
           +DD G+S + +AAS G  E+ + L+  GA V  +N++G T +  +      ++   VML 
Sbjct: 70  KDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEI--AVML- 126
Query: 533 FALEKG-NRNAGGFY---ALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREG 588
             LE G N +A   Y   A+H AA +G+L  + +L       N+ D +G TPL LA  E 
Sbjct: 127 --LEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEE 184
Query: 589 HGPMCELLISNGAVCDIKNARGETALSLAR 618
                +LL+S GA   I+N   +T L +A+
Sbjct: 185 RVEEAKLLVSQGASIYIENKEEKTPLQVAK 214

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 9/150 (6%)
Query: 473 QDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLE 532
           +DD G+S + +AAS G  E+ + L+  GA V  +N++G T +  +      ++   VML 
Sbjct: 69  KDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEI--AVML- 125
Query: 533 FALEKG-NRNAGGFY---ALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREG 588
             LE G N +A   Y   A+H AA +G+L  + +L       N+ D +G TPL LA  E 
Sbjct: 126 --LEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEE 183
Query: 589 HGPMCELLISNGAVCDIKNARGETALSLAR 618
                +LL+S GA   I+N   +T L +A+
Sbjct: 184 RVEEAKLLVSQGASIYIENKEEKTPLQVAK 213

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
           GRT LH A   G    V +LL  GAD     +  +T   P+HLAAR G+  +V+ L+++G
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRT---PLHLAARNGHLEVVKLLLEAG 58
Query: 364 CDLNTKTESGETALMISAKYKQEECVKVLAKAGA 397
            D+N K ++G T L ++A+    E VK+L +AGA
Sbjct: 59  ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 60/126 (47%), Gaps = 34/126 (26%)
Query: 476 NGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFAL 535
           NG + + +AA  GH+EV + L+ AGADV   +K+G+T                       
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTP---------------------- 38
Query: 536 EKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCEL 595
                       LH AAR G L+ V+LL   G  VN  D +G TPL LAAR GH  + +L
Sbjct: 39  ------------LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKL 86
Query: 596 LISNGA 601
           L+  GA
Sbjct: 87  LLEAGA 92

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 36/81 (44%), Positives = 47/81 (58%)
Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC 603
           G   LH AAR G L+ V+LL   G  VN  D +G TPL LAAR GH  + +LL+  GA  
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61
Query: 604 DIKNARGETALSLARKNSSMK 624
           + K+  G T L LA +N  ++
Sbjct: 62  NAKDKNGRTPLHLAARNGHLE 82

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 576 DGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEV 635
           +G TPL LAAR GH  + +LL+  GA  + K+  G T L LA +N  +          EV
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL----------EV 50
Query: 636 ARMLVLGGGHVLKHTKGGKGTP 657
            ++L+  G  V    K G+ TP
Sbjct: 51  VKLLLEAGADVNAKDKNGR-TP 71

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 1/137 (0%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA+ G  +  R L+  GADV   + +G T + L+  N   ++ E V+L+   +    
Sbjct: 10  LLEAAAAGQDDEVRILMANGADVNATDDNGLTPLHLAAANGQLEIVE-VLLKNGADVNAS 68
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           ++ G   LH AA  G L+ V +L   G  VN  D  G+TPL LAA  G   + E+L+ +G
Sbjct: 69  DSAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHG 128
Query: 601 AVCDIKNARGETALSLA 617
           A  + ++A G TA  ++
Sbjct: 129 ADVNAQDALGLTAFDIS 145

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 43/81 (53%)
Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC 603
           G   LH AA  G L+ V +L   G  VN  D  G TPL LAA +GH  + E+L+ +GA  
Sbjct: 39  GLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAYDGHLEIVEVLLKHGADV 98
Query: 604 DIKNARGETALSLARKNSSMK 624
           +  +  G T L LA  +  ++
Sbjct: 99  NAYDRAGWTPLHLAALSGQLE 119

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 1/142 (0%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA  G  +  R L+  GADV   + SG T + L+  N + ++ E V+L+   +    
Sbjct: 18  LLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVE-VLLKNGADVNAV 76
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           +  G   L  AA  G L+ V +L   G  VN  D +G+TPL LAA  GH  + E+L+ NG
Sbjct: 77  DHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNG 136
Query: 601 AVCDIKNARGETALSLARKNSS 622
           A  + ++  G+TA  ++  N +
Sbjct: 137 ADVNAQDKFGKTAFDISIDNGN 158

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 66.2 bits (160), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 473 QDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLE 532
           +DD G+S + +AAS G  E+ + L+  GA V  +N++G T +  +      ++   VML 
Sbjct: 69  KDDAGWSPLHIAASAGRDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEI--AVML- 125
Query: 533 FALEKG-NRNAGGFY---ALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREG 588
             LE G N +A   Y   A+H AA +G+L  V +L       N+ D +G TPL LA  E 
Sbjct: 126 --LEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEE 183
Query: 589 HGPMCELLISNGAVCDIKNARGETALSLAR 618
                + L++ GA   I+N   +T L +A+
Sbjct: 184 RVEEAKFLVTQGASIYIENKEEKTPLQVAK 213

>pdb|1BI8|B Chain B, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 166

Iteration: 1
 Score = 65.9 bits (159), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 72/141 (51%), Gaps = 16/141 (11%)
Query: 484 AASKGHVE-----VFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG 538
           AA++G V+     + RELV+  A    LN+ GKTA+ +          E  +L+      
Sbjct: 15  AAARGDVQEVRRLLHRELVHPDA----LNRFGKTALQVMMFGSTAIALE--LLKQGASPN 68
Query: 539 NRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLIS 598
            ++  G   +H AAR G LD +++L   G  VNVPDG G  P+ LA +EGH  +   L  
Sbjct: 69  VQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL-- 126
Query: 599 NGAVCDI--KNARGETALSLA 617
             A  D+  ++ARG T L LA
Sbjct: 127 -AAESDLHRRDARGLTPLELA 146

>pdb|1BD8|A Chain A, Structure Of Cdk Inhibitor P19ink4d Length = 156

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 50/141 (35%), Positives = 72/141 (51%), Gaps = 16/141 (11%)
Query: 484 AASKGHVE-----VFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG 538
           AA++G V+     + RELV+  A    LN+ GKTA+ +          E  +L+      
Sbjct: 9   AAARGDVQEVRRLLHRELVHPDA----LNRFGKTALQVMMFGSTAIALE--LLKQGASPN 62
Query: 539 NRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLIS 598
            ++  G   +H AAR G LD +++L   G  VNVPDG G  P+ LA +EGH  +   L  
Sbjct: 63  VQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL-- 120
Query: 599 NGAVCDI--KNARGETALSLA 617
             A  D+  ++ARG T L LA
Sbjct: 121 -AAESDLHRRDARGLTPLELA 140

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 65.9 bits (159), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 9/150 (6%)
Query: 473 QDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLE 532
           +DD G+S + +AAS G  E+ + L+  GA V  +N++G T +  +      ++   VML 
Sbjct: 69  KDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEI--AVML- 125
Query: 533 FALEKG-NRNAGGFY---ALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREG 588
             LE G N +A   Y   A+H AA +G+L  V +L       N+ D +G TPL LA  E 
Sbjct: 126 --LEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEE 183
Query: 589 HGPMCELLISNGAVCDIKNARGETALSLAR 618
                + L++ GA   I+N   +T L +A+
Sbjct: 184 RVEEAKFLVTQGASIYIENKEEKTPLQVAK 213

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 38/181 (20%)
Query: 347 AARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSG 406
           AAR G    V+ L+ +G D+N     G T L ++A +   E V+VL K GAD        
Sbjct: 21  AARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADV------- 73
Query: 407 QSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGRE 466
            +A    GS                             +PL   A  G +  ++ L+ + 
Sbjct: 74  -NAYDTLGS-----------------------------TPLHLAAHFGHLEIVEVLL-KN 102
Query: 467 ELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLF 526
             +++ +DDNG + + +AA++GH+E+   L+  GADV   +K GKTA  +S  N N DL 
Sbjct: 103 GADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVNAQDKFGKTAFDISINNGNEDLA 162
Query: 527 E 527
           E
Sbjct: 163 E 163

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA  G  +  R L+  GADV   +  G T + L+    + ++ E V+L+   +    
Sbjct: 18  LLEAARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVE-VLLKNGADVNAY 76
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           +  G   LH AA  G L+ V +L   G  VN  D +G TPL LAA  GH  + E+L+  G
Sbjct: 77  DTLGSTPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYG 136
Query: 601 AVCDIKNARGETALSLARKNSS 622
           A  + ++  G+TA  ++  N +
Sbjct: 137 ADVNAQDKFGKTAFDISINNGN 158

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA  G  +  R L+  GADV   +  G T + L+    + ++ E V+L+   +    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVE-VLLKNGADVNAL 76
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           +  G   LH AA+RG L+ V +L   G  VN  D  G TPL LAA  GH  + E+L+  G
Sbjct: 77  DFSGSTPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYG 136
Query: 601 AVCDIKNARGETALSLARKNSS 622
           A  + ++  G+TA  ++  N +
Sbjct: 137 ADVNAQDKFGKTAFDISIDNGN 158

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 33/74 (44%), Positives = 42/74 (56%)
Query: 551 AARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARG 610
           AAR G  D VR+L + G  VN  D  G TPL LAAR GH  + E+L+ NGA  +  +  G
Sbjct: 21  AARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSG 80
Query: 611 ETALSLARKNSSMK 624
            T L LA K   ++
Sbjct: 81  STPLHLAAKRGHLE 94

>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module Length = 91

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/72 (45%), Positives = 45/72 (62%)
Query: 551 AARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARG 610
           AAR G  D VR+L + G  VN  D DGYTPL LAAREGH  + E+L+  GA  + ++  G
Sbjct: 9   AARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFG 68
Query: 611 ETALSLARKNSS 622
           +TA  ++  N +
Sbjct: 69  KTAFDISIDNGN 80

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
           G T LH+A   G    V  LLS GAD     +   T   P+HLAA+ G++ IV+ L+  G
Sbjct: 9   GNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNT---PLHLAAKNGHAEIVKLLLAKG 65
Query: 364 CDLNTKTESGETALMISAKYKQEECVKVLAKAGADF 399
            D+N +++ G T   ++ K    E VK+L   GAD 
Sbjct: 66  ADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADV 101

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC 603
           G   LH AA+ G  + V+ L S+G  VN    DG TPL LAA+ GH  + +LL++ GA  
Sbjct: 9   GNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV 68
Query: 604 DIKNARGETALSLARKN 620
           + ++  G T   LA+KN
Sbjct: 69  NARSKDGNTPEHLAKKN 85

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA  G  +  R L+  GADV   + SG T + L+    + ++ E V+L+   +    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVE-VLLKHGADVNAI 76
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           +  G   LH AA  G L+ V +L   G  VN  D  G TPL LAA  GH  + E+L+ +G
Sbjct: 77  DIXGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHG 136
Query: 601 AVCDIKNARGETALSLARKNSS 622
           A  + ++  G+TA  ++  N +
Sbjct: 137 ADVNAQDKFGKTAFDISIDNGN 158

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           ++ AA  G  +  R L+  GADV   + SG T + L+    + ++ E V+L+   +    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVE-VLLKHGADVNAI 76
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           +  G   LH AA  G L+ V +L   G  VN  D  G TPL LAA  GH  + E+L+ +G
Sbjct: 77  DIMGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHG 136
Query: 601 AVCDIKNARGETALSLARKNSS 622
           A  + ++  G+TA  ++  N +
Sbjct: 137 ADVNAQDKFGKTAFDISIDNGN 158

>pdb|1BLX|B Chain B, P19ink4dCDK6 COMPLEX Length = 166

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 12/141 (8%)
Query: 484 AASKGHVE-----VFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG 538
           AA++G V+     + RELV+  A    LN+ GKTA+ +          E  +L+      
Sbjct: 15  AAARGDVQEVRRLLHRELVHPDA----LNRFGKTALQVMMFGSPAVALE--LLKQGASPN 68
Query: 539 NRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLIS 598
            ++A G   +H AAR G LD +++L   G  VN  D  G  P+ LA REGH  +   L  
Sbjct: 69  VQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVSFLAP 128
Query: 599 NGAVCDIKNARGETALSLARK 619
              +   ++A G T L LAR+
Sbjct: 129 ESDLHH-RDASGLTPLELARQ 148

>pdb|1AP7|A Chain A, P19-Ink4d From Mouse, Nmr, 20 Structures Length = 168

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 12/141 (8%)
Query: 484 AASKGHVE-----VFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG 538
           AA++G V+     + RELV+  A    LN+ GKTA+ +          E  +L+      
Sbjct: 17  AAARGDVQEVRRLLHRELVHPDA----LNRFGKTALQVMMFGSPAVALE--LLKQGASPN 70
Query: 539 NRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLIS 598
            ++A G   +H AAR G LD +++L   G  VN  D  G  P+ LA REGH  +   L  
Sbjct: 71  VQDASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVSFLAP 130
Query: 599 NGAVCDIKNARGETALSLARK 619
              +   ++A G T L LAR+
Sbjct: 131 ESDLHH-RDASGLTPLELARQ 150

>pdb|1MX4|A Chain A, Structure Of P18ink4c (F82q) Length = 168

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 484 AASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAG 543
           AA++G +E    L+    +V   N  G+TA+ + +L  N ++  +++L  A     ++  
Sbjct: 12  AAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLG-NPEIARRLLLRGA-NPDLKDRT 69
Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV- 602
           GF  +H AAR G LD ++ L      VN+ D +G  PL LAA+EGH  + E L+ + A  
Sbjct: 70  GFAVIHDAARAGQLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129
Query: 603 CDIKNARGETALSLAR 618
              +N +G+TA  LAR
Sbjct: 130 VGHRNHKGDTACDLAR 145

>pdb|1MX6|A Chain A, Structure Of P18ink4c (F92n) Length = 168

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 484 AASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAG 543
           AA++G +E    L+    +V   N  G+TA+ + +L  N ++  +++L  A     ++  
Sbjct: 12  AAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLG-NPEIARRLLLRGA-NPDLKDRT 69
Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV- 602
           GF  +H AAR G LD ++ L      VN+ D +G  PL LAA+EGH  + E L+ + A  
Sbjct: 70  GFAVIHDAARAGFLDTLQTLLENQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129
Query: 603 CDIKNARGETALSLAR 618
              +N +G+TA  LAR
Sbjct: 130 VGHRNHKGDTACDLAR 145

>pdb|4HBD|A Chain A, Crystal Structure Of Kank2 Ankyrin Repeats Length = 276

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 80/161 (49%), Gaps = 16/161 (9%)
Query: 470 LDY----QDDNGFSAVMVAASKGHVEVFRELVYAGA-DVKLLNKSGKTAIMLSELN--QN 522
           LDY     D NG +A+  + S  +  V ++L+ +G   V   N++G + IML+ L   + 
Sbjct: 100 LDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKT 159
Query: 523 CDLFEKVMLEFALEKGNRNA----GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGY 578
            D  E V+  F L  GN NA     G  AL  A   G +D V+ L +    VNV D DG 
Sbjct: 160 QDDIETVLQLFRL--GNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGS 217
Query: 579 TPLMLAAREGHGPMCELLISNGAVCDIK--NARGETALSLA 617
           T LM A   GH  +  LL++  + CDI   +  G TAL +A
Sbjct: 218 TALMCACEHGHKEIAGLLLAVPS-CDISLTDRDGSTALMVA 257

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
           G+ LL  A   G    V +L++ GAD     R   T   P+HLAA   +  IV+ L+  G
Sbjct: 15  GKKLLE-AARAGQDDEVRILMANGADVNANDRKGNT---PLHLAADYDHLEIVEVLLKHG 70
Query: 364 CDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSN 416
            D+N     G T L ++A +   E V+VL K GAD       G++A  I+  N
Sbjct: 71  ADVNAHDNDGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDN 123

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 52.4 bits (124), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 43/79 (54%)
Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC 603
           G   LH AA    L+ V +L   G  VN  D DG TPL LAA  GH  + E+L+ +GA  
Sbjct: 47  GNTPLHLAADYDHLEIVEVLLKHGADVNAHDNDGSTPLHLAALFGHLEIVEVLLKHGADV 106
Query: 604 DIKNARGETALSLARKNSS 622
           + ++  G+TA  ++  N +
Sbjct: 107 NAQDKFGKTAFDISIDNGN 125

>pdb|1IHB|A Chain A, Crystal Structure Of P18-Ink4c(Ink6) Length = 162

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 484 AASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAG 543
           AA++G +E    L+    +V   N  G+TA+ + +L  N ++  +++L  A     ++  
Sbjct: 12  AAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLG-NPEIARRLLLRGA-NPDLKDRT 69
Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV- 602
           GF  +H AAR G LD ++ L      VN+ D +G  PL LAA+EGH  + E L+ + A  
Sbjct: 70  GFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129
Query: 603 CDIKNARGETALSLAR 618
              +N +G+TA  LAR
Sbjct: 130 VGHRNHKGDTACDLAR 145

>pdb|1BU9|A Chain A, Solution Structure Of P18-Ink4c, 21 Structures Length = 168

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 484 AASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAG 543
           AA++G +E    L+    +V   N  G+TA+ + +L  N ++  +++L  A     ++  
Sbjct: 12  AAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLG-NPEIARRLLLRGA-NPDLKDRT 69
Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV- 602
           GF  +H AAR G LD ++ L      VN+ D +G  PL LAA+EGH  + E L+ + A  
Sbjct: 70  GFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129
Query: 603 CDIKNARGETALSLAR 618
              +N +G+TA  LAR
Sbjct: 130 VGHRNHKGDTACDLAR 145

>pdb|2DZN|A Chain A, Crystal Structure Analysis Of Yeast Nas6p Complexed With The Proteasome Subunit, Rpt3 Length = 228

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 19/194 (9%)
Query: 431 RSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLD-YQDDNGFSAVMVAASKGH 489
           + G IP   +V+         QA +I +   L   E +NLD Y DD+G++   +A S G+
Sbjct: 34  QDGRIPLHWSVSF--------QAHEITSF-LLSKMENVNLDDYPDDSGWTPFHIACSVGN 84
Query: 490 VEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGN----RNAGGF 545
           +EV + L Y       LNK     +    L      FE  + +F +E G     ++    
Sbjct: 85  LEVVKSL-YDRPLKPDLNKITNQGVTCLHLAVGKKWFE--VSQFLIENGASVRIKDKFNQ 141
Query: 546 YALHCAARRGDLDAVRLLTSRGY-GVNVPDGDGYTPLMLAAREGHGPMCELLISN-GAVC 603
             LH AA  G L  + LL   G   VN  D  G+TPL  A  EGHG    LL+   GA  
Sbjct: 142 IPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEY 201
Query: 604 DIKNARGETALSLA 617
           D+ + +G  A  +A
Sbjct: 202 DLVDNKGAKAEDVA 215

>pdb|1IXV|A Chain A, Crystal Structure Analysis Of Homolog Of Oncoprotein Gankyrin, An Interactor Of Rb And Cdk46 Length = 231

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 19/194 (9%)
Query: 431 RSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLD-YQDDNGFSAVMVAASKGH 489
           + G IP   +V+         QA +I +   L   E +NLD Y DD+G++   +A S G+
Sbjct: 34  QDGRIPLHWSVSF--------QAHEITSF-LLSKMENVNLDDYPDDSGWTPFHIACSVGN 84
Query: 490 VEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGN----RNAGGF 545
           +EV + L Y       LNK     +    L      FE  + +F +E G     ++    
Sbjct: 85  LEVVKSL-YDRPLKPDLNKITNQGVTCLHLAVGKKWFE--VSQFLIENGASVRIKDKFNQ 141
Query: 546 YALHCAARRGDLDAVRLLTSRGY-GVNVPDGDGYTPLMLAAREGHGPMCELLISN-GAVC 603
             LH AA  G L  + LL   G   VN  D  G+TPL  A  EGHG    LL+   GA  
Sbjct: 142 IPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEY 201
Query: 604 DIKNARGETALSLA 617
           D+ + +G  A  +A
Sbjct: 202 DLVDNKGAKAEDVA 215

>pdb|3EU9|A Chain A, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein 14 Length = 240

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 474 DDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEF 533
           DD     ++ A   G  E  RELV AG DV+  +K   T +  + +N   DL +  + + 
Sbjct: 6   DDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKG 65
Query: 534 ALEK---GNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHG 590
           A+     G+ N+     LH A R+G L  V  L   G   ++ DG+G + + LAA+ GH 
Sbjct: 66  AIVDQLGGDLNST---PLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHT 122
Query: 591 PMCELLISNGAVCDIKNARGETALSLA 617
            +   LI+ G   D+ +  G T L  A
Sbjct: 123 SIVAYLIAKGQDVDMMDQNGMTPLMWA 149

>pdb|1WG0|A Chain A, Structural Comparison Of Nas6p Protein Structures In Two Different Crystal Forms Length = 243

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 19/194 (9%)
Query: 431 RSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLD-YQDDNGFSAVMVAASKGH 489
           + G IP   +V+         QA +I +   L   E +NLD Y DD+G++   +A S G+
Sbjct: 34  QDGRIPLHWSVSF--------QAHEITSF-LLSKMENVNLDDYPDDSGWTPFHIACSVGN 84
Query: 490 VEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGN----RNAGGF 545
           +EV + L Y       LNK     +    L      FE  + +F +E G     ++    
Sbjct: 85  LEVVKSL-YDRPLKPDLNKITNQGVTCLHLAVGKKWFE--VSQFLIENGASVRIKDKFNQ 141
Query: 546 YALHCAARRGDLDAVRLLTSRGY-GVNVPDGDGYTPLMLAAREGHGPMCELLISN-GAVC 603
             LH AA  G L  + LL   G   VN  D  G+TPL  A  EGHG    LL+   GA  
Sbjct: 142 IPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEY 201
Query: 604 DIKNARGETALSLA 617
           D+ + +G  A  +A
Sbjct: 202 DLVDNKGAKAEDVA 215

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 300 SPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSL 359
           + ++G T LH A + G    V VLL  GAD      T +T   P+HLAA   +  IV+ L
Sbjct: 43  NDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTGRT---PLHLAAWADHLEIVEVL 99
Query: 360 IDSGCDLNTKTESGETALMISAKYKQEECVKVLAK 394
           +  G D+N + + G+TA  IS     E+  ++L K
Sbjct: 100 LKHGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 134

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC 603
           G   LH AA  G L+ V +L   G  VN     G TPL LAA   H  + E+L+ +GA  
Sbjct: 47  GHTPLHLAAMLGHLEIVEVLLKNGADVNATGNTGRTPLHLAAWADHLEIVEVLLKHGADV 106
Query: 604 DIKNARGETALSLARKNSS 622
           + ++  G+TA  ++  N +
Sbjct: 107 NAQDKFGKTAFDISIDNGN 125

>pdb|3HRA|A Chain A, Crystal Structure Of Ef0377 An Ankyrin Repeat Protein Length = 201

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 12/182 (6%)
Query: 447 LMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLL 506
           L+  A   D   +K ++      +D  D  G + + +A     +E+ + L+  GAD+ L 
Sbjct: 9   LLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQ 68
Query: 507 NKSGKTAIMLSELNQNCDLFEKVMLEFA---LEKGNRNAGGFYALHCAARRGDLDAVRLL 563
           N    +  + +      ++    ML+ A   L K NR  G   AL  AA +G +D V+LL
Sbjct: 69  NSISDSPYLYAGAQGRTEIL-AYMLKHATPDLNKHNRYGGN--ALIPAAEKGHIDNVKLL 125
Query: 564 TSRGY-GVNVPDGDGYTPLMLAA--REG---HGPMCELLISNGAVCDIKNARGETALSLA 617
              G   ++  +  GYT L+ A   REG   +  + +LL+ NGA   IK+  G TA+  A
Sbjct: 126 LEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYA 185
Query: 618 RK 619
            +
Sbjct: 186 NQ 187

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
           G+ LL  A   G    V +L++ GAD        K    P+HLAA   +  IV+ L+ +G
Sbjct: 15  GKKLLE-AARAGQDDEVRILMANGADVNAE---DKVGLTPLHLAAMNDHLEIVEVLLKNG 70
Query: 364 CDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSN 416
            D+N     GET L + A Y   E V+VL K GAD       G++A  I+  N
Sbjct: 71  ADVNAIDAIGETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDN 123

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 41/79 (51%)
Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC 603
           G   LH AA    L+ V +L   G  VN  D  G TPL L A  GH  + E+L+ +GA  
Sbjct: 47  GLTPLHLAAMNDHLEIVEVLLKNGADVNAIDAIGETPLHLVAMYGHLEIVEVLLKHGADV 106
Query: 604 DIKNARGETALSLARKNSS 622
           + ++  G+TA  ++  N +
Sbjct: 107 NAQDKFGKTAFDISIDNGN 125

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 4/113 (3%)
Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
           G+ LL  A   G    V +L++ GAD        +    P+HLAA+LG+  IV+ L+  G
Sbjct: 15  GKKLLE-AARAGQDDEVRILMANGADVNA---LDEDGLTPLHLAAQLGHLEIVEVLLKYG 70
Query: 364 CDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSN 416
            D+N +   G T L ++A     E V+VL K GAD       G++A  I+  N
Sbjct: 71  ADVNAEDNFGITPLHLAAIRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDN 123

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 44/79 (55%)
Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC 603
           G   LH AA+ G L+ V +L   G  VN  D  G TPL LAA  GH  + E+L+ +GA  
Sbjct: 47  GLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAIRGHLEIVEVLLKHGADV 106
Query: 604 DIKNARGETALSLARKNSS 622
           + ++  G+TA  ++  N +
Sbjct: 107 NAQDKFGKTAFDISIDNGN 125

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC 603
           G   LH AA+RG L+ V +L   G  VN  D  G TPL LAA  GH  + E+L+  GA  
Sbjct: 47  GVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWGRTPLHLAATVGHLEIVEVLLEYGADV 106
Query: 604 DIKNARGETALSLARKNSS 622
           + ++  G+TA  ++  N +
Sbjct: 107 NAQDKFGKTAFDISIDNGN 125

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 3/156 (1%)
Query: 468 LNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFE 527
           +N+  QD  G S + VAA  G  ++   L+  GA+    N      + L+   Q      
Sbjct: 79  VNVTSQD--GSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLA-CQQGHFQVV 135
Query: 528 KVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAARE 587
           K +L+   +   ++  G   L  A   G  + V LL   G  +N  +  G T L  A  E
Sbjct: 136 KCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIE 195
Query: 588 GHGPMCELLISNGAVCDIKNARGETALSLARKNSSM 623
            H  + ELL+ +GA   + N R  TA+  A +NS +
Sbjct: 196 KHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKI 231

>pdb|1MX2|A Chain A, Structure Of F71n Mutant Of P18ink4c Length = 168

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 73/136 (53%), Gaps = 3/136 (2%)
Query: 484 AASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAG 543
           AA++G +E    L+    +V   N  G+TA+ + +L  N ++  +++L  A     ++  
Sbjct: 12  AAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLG-NPEIARRLLLRGA-NPDLKDRT 69
Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV- 602
           G   +H AAR G LD ++ L      VN+ D +G  PL LAA+EGH  + E L+ + A  
Sbjct: 70  GNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129
Query: 603 CDIKNARGETALSLAR 618
              +N +G+TA  LAR
Sbjct: 130 VGHRNHKGDTACDLAR 145

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 3/119 (2%)
Query: 298 YNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQ 357
           + +   G + LH A   G      VLL  G       +  +T   P+H+AA  G++ IV+
Sbjct: 28  FTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRT---PLHMAASEGHANIVE 84
Query: 358 SLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSN 416
            L+  G D+N K     TAL  + ++  +E V++L K GAD    S   ++A  I+  N
Sbjct: 85  VLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDN 143

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC 603
           G   LH AA+RG L+ V +L   G  VN  D  G TPL LAA  GH  + E+L+  GA  
Sbjct: 47  GVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWGRTPLHLAATVGHLEIVEVLLEYGADV 106
Query: 604 DIKNARGETALSLARKNSS 622
           + ++  G+TA  ++  N +
Sbjct: 107 NAQDKFGKTAFDISIDNGN 125

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 117/306 (38%), Gaps = 42/306 (13%)
Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
           P+HLAA      IVQ L+  G D++ K + G   L  +  Y   E  ++L K GA    +
Sbjct: 61  PLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAM 120
Query: 403 SVSGQSASSIAGSNWWSVGFQRAVLD--------IIRSGNIPKSSNVAVFSPLMFVAQAG 454
            +            W       A           ++  G  P   N    S       A 
Sbjct: 121 DL------------WQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKS-------AV 161
Query: 455 DIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAI 514
           D+A    L  RE L  +++   G S +  A      +V + L     + K   +S +TA+
Sbjct: 162 DMAPTPEL--RERLTYEFK---GHSLLQAAREADLAKVKKTLALEIINFKQ-PQSHETAL 215
Query: 515 --MLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNV 572
              ++ L+       +++L        +N      LH AA R   D + +L   G  +N 
Sbjct: 216 HCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNA 275
Query: 573 PDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVIL 632
            D  G T L  AA  GH   C LL+S G+   I + +G TA       + M N+A   IL
Sbjct: 276 LDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTA-------AQMGNEAVQQIL 328
Query: 633 DEVARM 638
            E   M
Sbjct: 329 SESTPM 334

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 68/171 (39%), Gaps = 34/171 (19%)
Query: 447 LMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLL 506
           L+  A++G+   L AL+    +N    D    + + +AA    V + + L+  GADV   
Sbjct: 28  LLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAK 87
Query: 507 NKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSR 566
           +K                                  GG   LH A   G  +   LL   
Sbjct: 88  DK----------------------------------GGLVPLHNACSYGHYEVTELLLKH 113
Query: 567 GYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLA 617
           G  VN  D   +TPL  AA +    +C LL+S+GA   + N  G++A+ +A
Sbjct: 114 GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMA 164

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC 603
           G   LH AA+RG L+ V +L   G  VN  D  G TPL LAA  GH  + E+L+  GA  
Sbjct: 47  GVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWGRTPLHLAATVGHLEIVEVLLEYGADV 106
Query: 604 DIKNARGETALSLARKNSS 622
           + ++  G+TA  ++  N +
Sbjct: 107 NAQDKFGKTAFDISIDNGN 125

>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 183

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 35/168 (20%)
Query: 450 VAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKS 509
           +A  G++  L   I +E + +++ D+ GF+ +M AA+ G + V   L+  GAD +LL K 
Sbjct: 26  LAAQGEMLYLATRIEQENV-INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKG 84
Query: 510 GKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYG 569
            ++A+ L                                  A  +G  D V++L   G  
Sbjct: 85  RESALSL----------------------------------ACSKGYTDIVKMLLDCGVD 110
Query: 570 VNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLA 617
           VN  D +G TPL+ A    H    ++L+ +GA   I+   G  ++ LA
Sbjct: 111 VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLA 158

>pdb|3SO8|A Chain A, Crystal Structure Of Ankra Length = 162

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 35/168 (20%)
Query: 450 VAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKS 509
           +A  G++  L   I +E + +++ D+ GF+ +M AA+ G + V   L+  GAD +LL K 
Sbjct: 8   LAAQGEMLYLATRIEQENV-INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKG 66
Query: 510 GKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYG 569
            ++A+ L                                  A  +G  D V++L   G  
Sbjct: 67  RESALSL----------------------------------ACSKGYTDIVKMLLDCGVD 92
Query: 570 VNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLA 617
           VN  D +G TPL+ A    H    ++L+ +GA   I+   G  ++ LA
Sbjct: 93  VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLA 140

>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 167

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 35/168 (20%)
Query: 450 VAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKS 509
           +A  G++  L   I +E + +++ D+ GF+ +M AA+ G + V   L+  GAD +LL K 
Sbjct: 10  LAAQGEMLYLATRIEQENV-INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKG 68
Query: 510 GKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYG 569
            ++A+ L                                  A  +G  D V++L   G  
Sbjct: 69  RESALSL----------------------------------ACSKGYTDIVKMLLDCGVD 94
Query: 570 VNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLA 617
           VN  D +G TPL+ A    H    ++L+ +GA   I+   G  ++ LA
Sbjct: 95  VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLA 142

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 71/189 (37%), Gaps = 34/189 (17%)
Query: 438 SSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELV 497
           S N      L+  A+AGD+  +K L   + +N    +    + +  AA    V V   L+
Sbjct: 5   SGNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLL 64
Query: 498 YAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDL 557
             GADV   +K                                  GG   LH A   G  
Sbjct: 65  QHGADVHAKDK----------------------------------GGLVPLHNACSYGHY 90
Query: 558 DAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLA 617
           +   LL   G  VNV D   +TPL  AA +G   +C+LL+ +GA    KN  G T L L 
Sbjct: 91  EVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLV 150
Query: 618 RKNSSMKND 626
           +   +   D
Sbjct: 151 KDGDTDIQD 159

>pdb|2FO1|E Chain E, Crystal Structure Of The Csl-Notch-Mastermind Ternary Complex Bound To Dna Length = 373

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 39/235 (16%)
Query: 306 TLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGC- 364
           T L  A+L      VA L   GAD     +++++  H    AA   +   V  L  +   
Sbjct: 168 TPLXLAVLARRRRLVAYLXKAGADPTIYNKSERSALH--QAAANRDFGXXVYXLNSTKLK 225
Query: 365 -DLNTKTESGETALMISAKYKQEECV---KVLAKAGADFGLVSVSGQSASSIAGSNWWSV 420
            D+     +G TAL I A  +  + V   K+L + GA       + + +    G      
Sbjct: 226 GDIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGR----- 280
Query: 421 GFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSA 480
                                   + L + AQ  +   +K L+G +  N D QD++G + 
Sbjct: 281 ------------------------TALHYAAQVSNXPIVKYLVGEKGSNKDKQDEDGKTP 316
Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQN---CDLFEKVMLE 532
           + +AA +G +EV   L+  GA V+ ++ +  TA  L++ N +    D+F++   E
Sbjct: 317 IXLAAQEGRIEVVXYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371

>pdb|2FO1|E Chain E, Crystal Structure Of The Csl-Notch-Mastermind Ternary Complex Bound To Dna Length = 373

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 11/131 (8%)
Query: 502 DVKLLNKSGKTAIMLSELNQNCD-------LFEK---VMLEFALEKGNRNAGGFYALHCA 551
           D++ L+++G TA+ +   N+  D       L EK   V  + A  K +    G  ALH A
Sbjct: 227 DIEELDRNGXTALXIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYA 286
Query: 552 ARRGDLDAVRLLT-SRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARG 610
           A+  +   V+ L   +G   +  D DG TP+ LAA+EG   +   LI  GA  +  +A  
Sbjct: 287 AQVSNXPIVKYLVGEKGSNKDKQDEDGKTPIXLAAQEGRIEVVXYLIQQGASVEAVDATD 346
Query: 611 ETALSLARKNS 621
            TA  LA+ N+
Sbjct: 347 HTARQLAQANN 357

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
           G T L  A+     G    LLS G++      + KT   P+  +   GYS +   L++ G
Sbjct: 68  GSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKT---PLMWSIIFGYSEMSYFLLEHG 124
Query: 364 CDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIA 413
            ++N +   GET L++++KY + E VK L + GAD     ++G +A + A
Sbjct: 125 ANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASA 174

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 40/81 (49%)
Query: 539 NRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLIS 598
           +++  G  AL  A +   L     L S+G  VN  D  G TPLM +   G+  M   L+ 
Sbjct: 63  DKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLE 122
Query: 599 NGAVCDIKNARGETALSLARK 619
           +GA  + +N  GET L +A K
Sbjct: 123 HGANVNDRNLEGETPLIVASK 143

>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 92

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 42/72 (58%)
Query: 551 AARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARG 610
           AAR G  D VR+L + G  V   D +G TPL LAAR GH  + +LL+  GA  + ++  G
Sbjct: 13  AARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFG 72
Query: 611 ETALSLARKNSS 622
           +TA  ++  N +
Sbjct: 73  KTAFDISIDNGN 84

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 52.4 bits (124), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
           YG T L+ A   G    V VLL  GAD           F P+HLAA +G+  I + L+  
Sbjct: 46  YGLTPLYLATAHGHLEIVEVLLKNGADVNA---VDAIGFTPLHLAAFIGHLEIAEVLLKH 102
Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAK 394
           G D+N + + G+TA  IS     E+  ++L K
Sbjct: 103 GADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC 603
           G   L+ A   G L+ V +L   G  VN  D  G+TPL LAA  GH  + E+L+ +GA  
Sbjct: 47  GLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADV 106
Query: 604 DIKNARGETALSLARKNSS 622
           + ++  G+TA  ++  N +
Sbjct: 107 NAQDKFGKTAFDISIGNGN 125

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 69/180 (38%), Gaps = 34/180 (18%)
Query: 447 LMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLL 506
           L+  A+AGD+  +K L   + +N    +    + +  AA    V V   L+  GADV   
Sbjct: 12  LLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAK 71
Query: 507 NKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSR 566
           +K                                  GG   LH A   G  +   LL   
Sbjct: 72  DK----------------------------------GGLVPLHNACSYGHYEVAELLVKH 97
Query: 567 GYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKND 626
           G  VNV D   +TPL  AA +G   +C+LL+ +GA    KN  G T L L +   +   D
Sbjct: 98  GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGDTDIQD 157

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 74/189 (39%), Gaps = 39/189 (20%)
Query: 447 LMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLL 506
           L+  A+AGD+  +K L   + +N    +    + +  AA    V V   L+  GADV   
Sbjct: 16  LLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAK 75
Query: 507 NKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSR 566
           +K                                  GG   LH A   G  +   LL   
Sbjct: 76  DK----------------------------------GGLVPLHNACSYGHYEVAELLVKH 101
Query: 567 GYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSS---- 622
           G  VNV D   +TPL  AA +G   +C+LL+ +GA    KN  G T L L +   +    
Sbjct: 102 GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGDTDIQD 161
Query: 623 -MKNDAELV 630
            ++ DA L+
Sbjct: 162 LLRGDAALL 170

>pdb|1MYO|A Chain A, Solution Structure Of Myotrophin, Nmr, 44 Structures Length = 118

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 543 GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV 602
           GG   LH AA  G L+ +  L  +G  +N PD    TPL+ A  EGH    +LL+S GA 
Sbjct: 34  GGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGAD 93
Query: 603 CDIKNARGETALSLARKNSSMK 624
             +K   G TAL  A  N ++K
Sbjct: 94  KTVKGPDGLTALE-ATDNQAIK 114

>pdb|3V30|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Rfxank Length = 172

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 34/168 (20%)
Query: 450 VAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKS 509
           +A  G++  LK  + + +  ++  D+ GF+ ++ A++ G +E  R L+  GAD  +L K 
Sbjct: 9   LAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKE 68
Query: 510 GKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYG 569
            ++A+ L+                       + GG+            D V LL  R   
Sbjct: 69  RESALSLA-----------------------STGGY-----------TDIVGLLLERDVD 94
Query: 570 VNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLA 617
           +N+ D +G TPL+ A R  H    E L++ GA    +   G T + LA
Sbjct: 95  INIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLA 142

>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 110

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 29/72 (40%), Positives = 41/72 (56%)
Query: 551 AARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARG 610
           AAR G  D VR+L + G  V   D +G TPL LAAR GH  + +LL+  GA    ++  G
Sbjct: 31  AARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFG 90
Query: 611 ETALSLARKNSS 622
           +TA  ++  N +
Sbjct: 91  KTAFDISIDNGN 102

>pdb|3AAA|C Chain C, Crystal Structure Of Actin Capping Protein In Complex With V-1 Length = 123

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 543 GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV 602
           GG   LH AA  G L+ +  L  +G  +N PD    TPL+ A  EGH    +LL+S GA 
Sbjct: 39  GGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGAD 98
Query: 603 CDIKNARGETALSLARKNSSMK 624
             +K   G TA   A  N ++K
Sbjct: 99  KTVKGPDGLTAFE-ATDNQAIK 119

>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 65/167 (38%), Gaps = 34/167 (20%)
Query: 452 QAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGK 511
           + G+  A++  +   E +L+  DD+GFS +  A  +G   V   L+  GA + ++N+   
Sbjct: 14  REGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDD 73
Query: 512 TAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVN 571
           T                                   LH AA  G  D V+ L      +N
Sbjct: 74  T----------------------------------PLHLAASHGHRDIVQKLLQYKADIN 99
Query: 572 VPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLAR 618
             +  G  PL  A   G   + E L++NGA+  I N  GE  +  A+
Sbjct: 100 AVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAK 146

>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 65/167 (38%), Gaps = 34/167 (20%)
Query: 452 QAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGK 511
           + G+  A++  +   E +L+  DD+GFS +  A  +G   V   L+  GA + ++N+   
Sbjct: 9   REGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDD 68
Query: 512 TAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVN 571
           T                                   LH AA  G  D V+ L      +N
Sbjct: 69  T----------------------------------PLHLAASHGHRDIVQKLLQYKADIN 94
Query: 572 VPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLAR 618
             +  G  PL  A   G   + E L++NGA+  I N  GE  +  A+
Sbjct: 95  AVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAK 141

>pdb|1D9S|A Chain A, Tumor Suppressor P15(Ink4b) Structure By Comparative Modeling And Nmr Data Length = 136

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 479 SAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG 538
           + +  AA++G VE  R+L+ AGAD   LN+ G+  I +  +  +  + E ++L  A    
Sbjct: 14  AGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMG-SAQVAELLLLHGAEPNC 72
Query: 539 NRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGH 589
              A     +H AAR G LD + +L   G  ++V D  G  P+ LA  +GH
Sbjct: 73  ADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGH 123

>pdb|1K1B|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A Unique Member Of The Ikappab Protein Family Length = 241

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 87/189 (46%), Gaps = 8/189 (4%)
Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGA----D 398
           P+HLA      ++V+ L+ +G         G+TA  ++ +++   C++ L  + A    D
Sbjct: 49  PLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLD 108
Query: 399 FGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAA 458
               +  G +A  +A +       Q   L + R  +I      +  SPL+   +   ++ 
Sbjct: 109 LEARNYDGLTALHVAVNTECQETVQ---LLLERGADIDAVDIKSGRSPLIHAVENNSLSM 165
Query: 459 LKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSE 518
           ++ L+ +   N++ Q  +G SA+  A+ +G + + R LV +GAD  L N    T +M++ 
Sbjct: 166 VQLLL-QHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVAR 224
Query: 519 LNQNCDLFE 527
             +  D+  
Sbjct: 225 SRRVIDILR 233

>pdb|1K1B|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A Unique Member Of The Ikappab Protein Family Length = 241

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 86/218 (39%), Gaps = 46/218 (21%)
Query: 445 SPLMFVAQAGDIAALKALI------GREELNLDYQDDNGFSAVMVAASKGHVEVFRELVY 498
           +PL      G++ A+  L+      GRE   LD  ++   + + +A       V R LV 
Sbjct: 11  TPLHIAVVQGNLPAVHRLVNLFQQGGRE---LDIYNNLRQTPLHLAVITTLPSVVRLLVT 67
Query: 499 AGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFA---LEKGNRNAGGFYALHCAA--- 552
           AGA    L++ G+TA  L+  +++      ++   A   L+   RN  G  ALH A    
Sbjct: 68  AGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE 127
Query: 553 ----------RRGDLDAV---------------------RLLTSRGYGVNVPDGDGYTPL 581
                     R  D+DAV                     +LL   G  VN     G + L
Sbjct: 128 CQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSAL 187
Query: 582 MLAAREGHGPMCELLISNGAVCDIKNARGETALSLARK 619
             A+  G  P+   L+ +GA   +KN   +T L +AR 
Sbjct: 188 HSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARS 225

>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank Length = 172

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 34/168 (20%)
Query: 450 VAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKS 509
           +A  G++  LK  + + +  ++  D+ GF+ ++ A++ G +E  R L+  GAD  +L K 
Sbjct: 9   LAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKE 68
Query: 510 GKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYG 569
            ++A+ L+                       + GG+            D V LL  R   
Sbjct: 69  RESALSLA-----------------------STGGY-----------TDIVGLLLERDVD 94
Query: 570 VNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLA 617
           +N+ D +G TPL+ A    H    E L++ GA    +   G T + LA
Sbjct: 95  INIYDWNGGTPLLYAVHGNHVKCVEALLARGADLTTEADSGYTPMDLA 142

>pdb|1IKN|D Chain D, IkappabalphaNF-Kappab Complex Length = 236

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHP---IHLAARLGYSTIVQSLI 360
           G T LH A   GC  +V VL             + T ++    +HLA+  GY  IV+ L+
Sbjct: 78  GNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLV 137
Query: 361 DSGCDLNTKTE-SGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQS 408
             G D+N +   +G TAL ++   +  + V +L K GAD   V+  G S
Sbjct: 138 SLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS 186

>pdb|1NFI|E Chain E, I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHP---IHLAARLGYSTIVQSLI 360
           G T LH A   GC  +V VL             + T ++    +HLA+  GY  IV+ L+
Sbjct: 75  GNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLV 134
Query: 361 DSGCDLNTKTE-SGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQS 408
             G D+N +   +G TAL ++   +  + V +L K GAD   V+  G S
Sbjct: 135 SLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS 183

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/80 (35%), Positives = 41/80 (51%)
Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
           N  G   LH A+ +GD+ +V  L   G   NV D  G+TPL  A   GH  + ELL+ + 
Sbjct: 7   NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK 66
Query: 601 AVCDIKNARGETALSLARKN 620
           A+ +    + ++ L  A KN
Sbjct: 67  ALVNTTGYQNDSPLHDAAKN 86

>pdb|3LVQ|E Chain E, The Crystal Structure Of Asap3 In Complex With Arf6 In Trans State Length = 497

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 327 GADAQCPIRTQKTEFHPIHLAARLGYST---IVQSLIDSGCDLNTKTESGETALMISAKY 383
           G DAQ P      E   +HLA ++       +V  +I +G  L+ K   G TAL  +A Y
Sbjct: 164 GPDAQAP------EELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALY 217
Query: 384 KQEECVKVLAKAGADFGLVSVSGQSASSIA 413
            Q +C+K+L K  A  G V+ +G++A  IA
Sbjct: 218 NQPDCLKLLLKGRALVGTVNEAGETALDIA 247

>pdb|4A63|B Chain B, Crystal Structure Of The P73-Aspp2 Complex At 2.6a Resolution Length = 239

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 508 KSGKTAIML-SELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSR 566
           K    A++L S L    DL ++++ E   +    N  G  ALH A   G  + V+ L   
Sbjct: 34  KFNPLALLLDSSLEGEFDLVQRIIYEVD-DPSLPNDEGITALHNAVCAGHTEIVKFLVQF 92
Query: 567 GYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGA 601
           G  VN  D DG+TPL  AA   +  +C+ L+ +GA
Sbjct: 93  GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGA 127

>pdb|2B0O|E Chain E, Crystal Structure Of Uplc1 Gap Domain Length = 301

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 327 GADAQCPIRTQKTEFHPIHLAARLGYS---TIVQSLIDSGCDLNTKTESGETALMISAKY 383
           G DAQ P      E   +HLA ++       +V  +I +G  L+ K   G TAL  +A Y
Sbjct: 183 GPDAQAP------EELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALY 236
Query: 384 KQEECVKVLAKAGADFGLVSVSGQSASSIA 413
            Q +C+K+L K  A  G V+ +G++A  IA
Sbjct: 237 NQPDCLKLLLKGRALVGTVNEAGETALDIA 266

>pdb|1YCS|B Chain B, P53-53bp2 Complex Length = 239

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 514 IMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVP 573
           ++ S L    DL ++++ E   +    N  G  ALH A   G  + V+ L   G  VN  
Sbjct: 41  LLDSSLEGEFDLVQRIIYEVD-DPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAA 99
Query: 574 DGDGYTPLMLAAREGHGPMCELLISNGA 601
           D DG+TPL  AA   +  +C+ L+ +GA
Sbjct: 100 DSDGWTPLHCAASCNNVQVCKFLVESGA 127

>pdb|3D9H|A Chain A, Crystal Structure Of The Splice Variant Of Human Asb9 (Hasb9-2), An Ankyrin Repeat Protein Length = 285

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 305 RTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGC 364
            T L +A + G    V +LL  GA  Q     +     PIH AAR G+   V SLI  G 
Sbjct: 126 HTPLFNACVSGSWDCVNLLLQHGASVQ----PESDLASPIHEAARRGHVECVNSLIAYGG 181
Query: 365 DLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
           +++ K     T L ++ + +Q  CVK L ++GAD
Sbjct: 182 NIDHKISHLGTPLYLACENQQRACVKKLLESGAD 215

>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch Receptor Length = 239

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 304 GRTLLHHAILCGCTGAVAVLLSCGA-DAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
           GRT LH A+     G   +LL   A +    +    T   P+ LAARL    +V+ LI +
Sbjct: 84  GRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTT---PLILAARLAIEGMVEDLITA 140
Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVL 392
             D+N    SG+TAL  +A     E V +L
Sbjct: 141 DADINAADNSGKTALHWAAAVNNTEAVNIL 170

>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch Receptor Length = 239

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 6/160 (3%)
Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
           G T LH A       A   LL  GADA     T +T  H    A  +G   I+  L +  
Sbjct: 51  GETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQIL--LRNRA 108
Query: 364 CDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQ 423
            +LN +   G T L+++A+   E  V+ L  A AD      SG++A   A     +V   
Sbjct: 109 TNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAA----AVNNT 164
Query: 424 RAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALI 463
            AV  ++       + +    +PL   A+ G   A KAL+
Sbjct: 165 EAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALL 204

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 305 RTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGC 364
            T L +A + G    V +LL  GA  Q     +     PIH AAR G+   V SLI  G 
Sbjct: 70  HTPLFNACVSGSWDCVNLLLQHGASVQ----PESDLASPIHEAARRGHVECVNSLIAYGG 125
Query: 365 DLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
           +++ K     T L ++ + +Q  CVK L ++GAD
Sbjct: 126 NIDHKISHLGTPLYLACENQQRACVKKLLESGAD 159

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 62/147 (42%), Gaps = 10/147 (6%)
Query: 478 FSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFE----KVMLEF 533
           +S +  AA  GH    R L+  G  V ++     TA  +S L++ C        K++L+ 
Sbjct: 4   WSPMHEAAIHGHQLSLRNLISQGWAVNII-----TADHVSPLHEACLGGHLSCVKILLKH 58
Query: 534 ALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMC 593
             +     A     L  A   G  D V LL   G  V  P+ D  +P+  AAR GH    
Sbjct: 59  GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ-PESDLASPIHEAARRGHVECV 117
Query: 594 ELLISNGAVCDIKNARGETALSLARKN 620
             LI+ G   D K +   T L LA +N
Sbjct: 118 NSLIAYGGNIDHKISHLGTPLYLACEN 144

>pdb|2RFA|A Chain A, Crystal Structure Of The Mouse Trpv6 Ankyrin Repeat Domain Length = 232

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 103/263 (39%), Gaps = 57/263 (21%)
Query: 343 PIHLAARLGYSTIVQSLID-SGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGL 401
           P+ LAA+      +  L+   GC+++ +   GETAL I+A Y   E   VL +A  +   
Sbjct: 6   PLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVF 65
Query: 402 VSVS-----GQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDI 456
             ++     GQ+A  IA  N  +V   RA+L   R  ++   +  +VF            
Sbjct: 66  EPMTSELYEGQTALHIAVIN-QNVNLVRALLA--RGASVSARATGSVFH----------- 111
Query: 457 AALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIML 516
                       NL Y  ++  S    AA  G  E+ R L+  GAD++  +  G T + +
Sbjct: 112 --------YRPHNLIYYGEHPLS---FAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHI 160
Query: 517 SELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGD-LDAVRLLTSRGYGVNVPDG 575
                             L+     A   Y L  +   GD L ++ L         VP+ 
Sbjct: 161 ----------------LILQPNKTFACQMYNLLLSYDGGDHLKSLEL---------VPNN 195
Query: 576 DGYTPLMLAAREGHGPMCELLIS 598
            G TP  LA  EG+  M + L+ 
Sbjct: 196 QGLTPFKLAGVEGNIVMFQHLMQ 218

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	748
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-61
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	8e-57
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-55
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	7e-54
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	4e-50
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-49
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	6e-21
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-47
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-30
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	5e-25
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	5e-19
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-46
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-45
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-35
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-30
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-28
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	4e-26
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	5e-26
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	4e-20
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-15
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-10
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-09
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	6e-04
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	5e-46
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-29
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-26
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-16
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-08
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	6e-46
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	9e-38
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-32
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	5e-26
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-24
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-21
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-18
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-07
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-07
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	6e-46
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-37
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	4e-31
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	8e-28
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-24
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	4e-18
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-14
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-10
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	1e-44
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	5e-39
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	7e-31
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-21
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	4e-20
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-17
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	4e-17
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	1e-16
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-14
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-09
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-44
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	4e-44
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-27
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	8e-22
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	9e-18
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-15
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-11
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	5e-08
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	7e-43
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	8e-34
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	4e-29
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	5e-24
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-21
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	6e-15
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	9e-43
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-38
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	5e-32
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-29
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	6e-25
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-24
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-24
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	6e-14
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-10
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	8e-04
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	4e-41
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-30
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	3e-24
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-23
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	5e-23
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-22
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-18
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	3e-18
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	5e-17
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-15
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	3e-11
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	6e-41
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-34
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	6e-28
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-26
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-18
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-16
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	8e-07
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-39
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	5e-38
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	8e-27
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	5e-24
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-21
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-19
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	4e-17
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-15
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	6e-14
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	8e-39
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-27
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-26
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-21
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-20
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	8e-18
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-15
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	2e-12
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	6e-38
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	8e-27
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	9e-27
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	7e-26
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-23
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-16
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	4e-16
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	6e-16
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	3e-15
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-11
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-11
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	3e-10
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	5e-35
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	3e-33
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	9e-26
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	6e-22
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-18
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	4e-18
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	7e-18
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-14
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-11
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-11
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-33
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-25
3v30_A	172	DNA-binding protein rfxank; structural genomics co	6e-20
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-17
3v30_A	172	DNA-binding protein rfxank; structural genomics co	4e-17
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-16
3v30_A	172	DNA-binding protein rfxank; structural genomics co	6e-12
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-11
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	3e-33
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-30
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-18
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	8e-14
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-12
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	7e-12
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	6e-07
3hra_A	201	Ankyrin repeat family protein; structural protein;	6e-33
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-27
3hra_A	201	Ankyrin repeat family protein; structural protein;	7e-26
3hra_A	201	Ankyrin repeat family protein; structural protein;	7e-24
3hra_A	201	Ankyrin repeat family protein; structural protein;	6e-23
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-20
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-16
3hra_A	201	Ankyrin repeat family protein; structural protein;	8e-16
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-12
3hra_A	201	Ankyrin repeat family protein; structural protein;	5e-06
3hra_A	201	Ankyrin repeat family protein; structural protein;	4e-05
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-32
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	7e-26
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-21
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	9e-21
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	5e-16
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-15
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	5e-13
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	5e-32
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-27
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-24
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	8e-23
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	4e-19
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-17
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	8e-17
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-11
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-11
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-10
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-31
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	4e-21
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-18
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-17
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-16
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-16
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	6e-13
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-10
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	4e-08
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-05
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	4e-31
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	4e-30
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-23
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-23
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	5e-22
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-18
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-15
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	3e-04
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	5e-30
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-23
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-18
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-11
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-06
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	8e-30
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	8e-25
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	1e-17
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	3e-13
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	5e-13
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	1e-11
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	6e-10
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	8e-30
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-27
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	5e-26
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	1e-25
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	2e-18
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	7e-14
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	2e-13
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	2e-13
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	6e-09
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	4e-29
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-26
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-18
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-18
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	5e-17
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	7e-13
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	3e-09
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	8e-29
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	3e-24
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	5e-19
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-16
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	6e-15
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-13
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-13
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-09
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-05
2rfa_A	232	Transient receptor potential cation channel subfa	4e-28
2rfa_A	232	Transient receptor potential cation channel subfa	1e-24
2rfa_A	232	Transient receptor potential cation channel subfa	3e-19
2rfa_A	232	Transient receptor potential cation channel subfa	5e-19
2rfa_A	232	Transient receptor potential cation channel subfa	2e-17
2rfa_A	232	Transient receptor potential cation channel subfa	1e-13
2rfa_A	232	Transient receptor potential cation channel subfa	1e-10
2rfa_A	232	Transient receptor potential cation channel subfa	2e-07
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	1e-27
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	1e-19
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	1e-18
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-14
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	1e-13
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-13
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	3e-13
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	8e-11
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	4e-07
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-27
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	8e-23
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-16
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	4e-13
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	2e-12
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	4e-12
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	2e-09
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	4e-06
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-27
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	6e-21
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	7e-16
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-15
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-14
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	3e-13
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	3e-08
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	2e-04
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	4e-27
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	8e-17
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	4e-16
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	3e-15
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	3e-14
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	5e-13
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-07
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-04
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	6e-27
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	5e-26
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-25
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	3e-18
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-12
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	7e-27
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-18
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-16
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-16
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	1e-14
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-14
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-11
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-07
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	7e-05
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	2e-26
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	2e-20
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	5e-20
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	3e-16
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	4e-13
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-12
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	2e-11
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	2e-10
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	5e-10
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	3e-06
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	4e-26
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	4e-21
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	1e-16
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	4e-15
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	3e-12
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	1e-10
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-10
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	1e-09
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	1e-08
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	3e-05
2etb_A	256	Transient receptor potential cation channel subfam	5e-26
2etb_A	256	Transient receptor potential cation channel subfam	5e-21
2etb_A	256	Transient receptor potential cation channel subfam	1e-18
2etb_A	256	Transient receptor potential cation channel subfam	4e-15
2etb_A	256	Transient receptor potential cation channel subfam	4e-14
2etb_A	256	Transient receptor potential cation channel subfam	5e-12
2etb_A	256	Transient receptor potential cation channel subfam	1e-05
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	5e-26
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	8e-25
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	5e-20
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-16
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	3e-16
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	6e-15
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	3e-12
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	4e-12
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	9e-11
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-09
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	6e-06
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	9e-26
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	7e-21
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-16
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	4e-16
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	5e-15
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	3e-14
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	4e-13
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	7e-10
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	3e-04
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-25
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-25
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-19
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-16
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	5e-14
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	7e-12
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-10
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-09
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	8e-25
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	6e-22
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-17
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-16
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-13
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	4e-13
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	4e-11
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-10
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-08
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	5e-07
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-04
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	7e-24
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	6e-23
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	1e-22
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	5e-20
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	1e-18
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-14
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	1e-12
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-10
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-07
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	9e-24
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	8e-23
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	2e-15
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	2e-10
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	5e-10
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	8e-10
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	2e-07
2pnn_A	273	Transient receptor potential cation channel subfa	9e-24
2pnn_A	273	Transient receptor potential cation channel subfa	9e-18
2pnn_A	273	Transient receptor potential cation channel subfa	1e-17
2pnn_A	273	Transient receptor potential cation channel subfa	1e-13
2pnn_A	273	Transient receptor potential cation channel subfa	5e-12
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-22
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	3e-18
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	3e-14
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	1e-13
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	7e-10
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	6e-09
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	4e-07
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	1e-06
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	1e-05
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	5e-22
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-20
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	5e-16
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	3e-11
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	3e-11
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	7e-11
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-10
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-10
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-05
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-04
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	7e-22
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	4e-14
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	1e-13
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-11
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	4e-11
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	9e-09
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	5e-08
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	2e-07
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	7e-06
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	5e-04
3jxi_A	260	Vanilloid receptor-related osmotically activated p	1e-17
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-17
3jxi_A	260	Vanilloid receptor-related osmotically activated p	5e-16
3jxi_A	260	Vanilloid receptor-related osmotically activated p	4e-13
3jxi_A	260	Vanilloid receptor-related osmotically activated p	6e-11
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	1e-14
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	1e-10
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	1e-10
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-07
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	8e-06
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-05
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	9e-13
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	1e-11
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	1e-08
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	3e-07
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	6e-07
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	8e-06
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	3e-05
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	2e-12
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	4e-12
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	5e-09
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	2e-06
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	3e-05
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	9e-05
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	1e-11
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	4e-08
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	3e-05
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	2e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-04

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  212 bits (543), Expect = 1e-61
 Identities = 98/491 (19%), Positives = 177/491 (36%), Gaps = 103/491 (20%)

Query: 178 ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL 237
           A   G + +V  L++ G   N ++                 + L  A  +    V + LL
Sbjct: 21  ASFMGHLPIVKNLLQRGASPNVSN-------------VKVETPLHMAARAGHTEVAKYLL 67

Query: 238 QAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVE-YFEITGSILRMLLQHL 296
           Q  A  + K +       T                 +   A   +  +     ++LL++ 
Sbjct: 68  QNKAKVNAKAKDD----QT----------------PLHCAARIGHTNMV----KLLLENN 103

Query: 297 SY-NSP-HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYST 354
           +  N     G T LH A   G    V  LL   A   C  +   T   P+H+AA+ G   
Sbjct: 104 ANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFT---PLHVAAKYGKVR 160

Query: 355 IVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAG 414
           + + L++     N   ++G T L ++  +   + VK+L   G      + +G        
Sbjct: 161 VAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNG-------- 212

Query: 415 SNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQD 474
                                        ++PL   A+   +   ++L+     + + + 
Sbjct: 213 -----------------------------YTPLHIAAKQNQVEVARSLLQYG-GSANAES 242

Query: 475 DNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFA 534
             G + + +AA +GH E+   L+   A+  L NKSG T + L     +       + +  
Sbjct: 243 VQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVP-----VADVL 297

Query: 535 LEKG----NRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHG 590
           ++ G         G+  LH A+  G++  V+ L      VN     GY+PL  AA++GH 
Sbjct: 298 IKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHT 357

Query: 591 PMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGH---VL 647
            +  LL+ NGA  +  ++ G T L++A++   +           V  +L +       VL
Sbjct: 358 DIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYI----------SVTDVLKVVTDETSFVL 407

Query: 648 KHTKGGKGTPH 658
              K     P 
Sbjct: 408 VSDKHRMSFPE 418

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  199 bits (508), Expect = 8e-57
 Identities = 108/536 (20%), Positives = 176/536 (32%), Gaps = 134/536 (25%)

Query: 101 STGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPACEE----ALLEASCHGQAR 155
           S G         G     +A   GHL I++ LL+ GAS           L  A+  G   
Sbjct: 2   SPGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTE 61

Query: 156 LAELLM--GSDL----IRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLK 209
           +A+ L+   + +          +H    A   G  ++V  L++   + N           
Sbjct: 62  VAKYLLQNKAKVNAKAKDDQTPLHC---AARIGHTNMVKLLLENNANPNLAT-------- 110

Query: 210 PSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLA 269
                    + L  A     V  V  LL+  A+               T + F       
Sbjct: 111 -----TAGHTPLHIAAREGHVETVLALLEKEASQACM-----------TKKGFT------ 148

Query: 270 EPYAITWCAVEYFEITGS--ILRMLLQH-LSYNSP-HYGRTLLHHAILCGCTGAVAVLLS 325
               +   A +Y    G   +  +LL+     N+    G T LH A+       V +LL 
Sbjct: 149 ---PLHV-AAKY----GKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLP 200

Query: 326 CGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQ 385
            G     P     T   P+H+AA+     + +SL+  G   N ++  G T L ++A+   
Sbjct: 201 RGGSPHSPAWNGYT---PLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGH 257

Query: 386 EECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFS 445
            E V +L    A+  L + SG                                      +
Sbjct: 258 AEMVALLLSKQANGNLGNKSGL-------------------------------------T 280

Query: 446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKL 505
           PL  VAQ G +     LI    + +D     G++ + VA+  G++++ + L+   ADV  
Sbjct: 281 PLHLVAQEGHVPVADVLIKH-GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNA 339

Query: 506 LNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTS 565
             K G +                                   LH AA++G  D V LL  
Sbjct: 340 KTKLGYS----------------------------------PLHQAAQQGHTDIVTLLLK 365

Query: 566 RGYGVNVPDGDGYTPLMLAAREGHGPMCELL---ISNGAVCDIKNARGETALSLAR 618
            G   N    DG TPL +A R G+  + ++L       +   + +    +      
Sbjct: 366 NGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFPETVD 421

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  195 bits (499), Expect = 2e-55
 Identities = 92/359 (25%), Positives = 145/359 (40%), Gaps = 61/359 (16%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
            G T LH A   G    V  LL  GA         +T   P+H+AAR G++ + + L+ +
Sbjct: 13  SGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVET---PLHMAARAGHTEVAKYLLQN 69

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGF 422
              +N K +  +T L  +A+      VK+L +  A+  L + +G                
Sbjct: 70  KAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAG---------------- 113

Query: 423 QRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVM 482
                                 +PL   A+ G +  + AL+ +E  +       GF+ + 
Sbjct: 114 ---------------------HTPLHIAAREGHVETVLALLEKE-ASQACMTKKGFTPLH 151

Query: 483 VAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG---- 538
           VAA  G V V   L+   A      K+G T + ++  + N D     +++  L +G    
Sbjct: 152 VAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLD-----IVKLLLPRGGSPH 206

Query: 539 NRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLIS 598
           +    G+  LH AA++  ++  R L   G   N     G TPL LAA+EGH  M  LL+S
Sbjct: 207 SPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLS 266

Query: 599 NGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTP 657
             A  ++ N  G T L L  +   +           VA +L+  G  V   T+ G  TP
Sbjct: 267 KQANGNLGNKSGLTPLHLVAQEGHV----------PVADVLIKHGVMVDATTRMGY-TP 314

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  191 bits (487), Expect = 7e-54
 Identities = 107/544 (19%), Positives = 180/544 (33%), Gaps = 147/544 (27%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGA 136
           +S +T L +A+  G++ +VK LL  GA  N    +      +A R GH E+ + LL+  A
Sbjct: 12  ESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKA 71

Query: 137 SQPACEE----ALLEASCHGQARLAELLM--GSDLIRPHVAVHSLVT----ACCRGFVDV 186
              A  +     L  A+  G   + +LL+   ++   P++A  +  T    A   G V+ 
Sbjct: 72  KVNAKAKDDQTPLHCAARIGHTNMVKLLLENNAN---PNLATTAGHTPLHIAAREGHVET 128

Query: 187 VDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMK 246
           V  L++                          + L  A    +V V +LLL+  A+ +  
Sbjct: 129 VLALLEKEASQACMT-------------KKGFTPLHVAAKYGKVRVAELLLERDAHPNAA 175

Query: 247 VRLGAWSWDTTTGEEFRVGAGLAEPYAIT--WCAVEY--FEITGSILRMLLQH-LSYNSP 301
            + G                       +T    AV +   +I     ++LL    S +SP
Sbjct: 176 GKNG-----------------------LTPLHVAVHHNNLDIV----KLLLPRGGSPHSP 208

Query: 302 -HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLI 360
              G T LH A           LL  G  A        T   P+HLAA+ G++ +V  L+
Sbjct: 209 AWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVT---PLHLAAQEGHAEMVALLL 265

Query: 361 DSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSV 420
               + N   +SG T L + A+        VL K G      +  G              
Sbjct: 266 SKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGY------------- 312

Query: 421 GFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSA 480
                                   +PL   +  G+I  +K L+  +  +++ +   G+S 
Sbjct: 313 ------------------------TPLHVASHYGNIKLVKFLLQHQA-DVNAKTKLGYSP 347

Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           +  AA +GH ++   L+  GA    ++  G T                            
Sbjct: 348 LHQAAQQGHTDIVTLLLKNGASPNEVSSDGTT---------------------------- 379

Query: 541 NAGGFYALHCAARRGDLDAVRLL---TSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLI 597
                  L  A R G +    +L   T     V V D    +              + ++
Sbjct: 380 ------PLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFPETV---------DEIL 424

Query: 598 SNGA 601
               
Sbjct: 425 DVSE 428

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  180 bits (460), Expect = 4e-50
 Identities = 97/470 (20%), Positives = 159/470 (33%), Gaps = 132/470 (28%)

Query: 194 GVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWS 253
           G+                       + L  A     + +V+ LLQ GA+ ++        
Sbjct: 4   GISGGGGG-------------ESGLTPLHVASFMGHLPIVKNLLQRGASPNVS------- 43

Query: 254 WDTTTGEEFRVGAGLAEPYAIT--WCAVEYFEITGS--ILRMLLQHLSY-NSP-HYGRTL 307
                 E              T    A       G   + + LLQ+ +  N+     +T 
Sbjct: 44  --NVKVE--------------TPLHMAARA----GHTEVAKYLLQNKAKVNAKAKDDQTP 83

Query: 308 LHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLN 367
           LH A   G T  V +LL   A+         T   P+H+AAR G+   V +L++      
Sbjct: 84  LHCAARIGHTNMVKLLLENNANPNLATTAGHT---PLHIAAREGHVETVLALLEKEASQA 140

Query: 368 TKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVL 427
             T+ G T L ++AKY +    ++L +  A       +G                     
Sbjct: 141 CMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGL-------------------- 180

Query: 428 DIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASK 487
                            +PL       ++  +K L+ R   +      NG++ + +AA +
Sbjct: 181 -----------------TPLHVAVHHNNLDIVKLLLPR-GGSPHSPAWNGYTPLHIAAKQ 222

Query: 488 GHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYA 547
             VEV R L+  G      +  G T                                   
Sbjct: 223 NQVEVARSLLQYGGSANAESVQGVT----------------------------------P 248

Query: 548 LHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKN 607
           LH AA+ G  + V LL S+    N+ +  G TPL L A+EGH P+ ++LI +G + D   
Sbjct: 249 LHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATT 308

Query: 608 ARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTP 657
             G T L +A    ++          ++ + L+     V   TK G  +P
Sbjct: 309 RMGYTPLHVASHYGNI----------KLVKFLLQHQADVNAKTKLGY-SP 347

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  179 bits (456), Expect = 1e-49
 Identities = 74/337 (21%), Positives = 123/337 (36%), Gaps = 61/337 (18%)

Query: 325 SCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYK 384
           S G        +  T   P+H+A+ +G+  IV++L+  G   N      ET L ++A+  
Sbjct: 2   SPGISGGGGGESGLT---PLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAG 58

Query: 385 QEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVF 444
             E  K L +  A             +    +  +                         
Sbjct: 59  HTEVAKYLLQNKAKV-----------NAKAKDDQT------------------------- 82

Query: 445 SPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVK 504
            PL   A+ G    +K L+     N +     G + + +AA +GHVE    L+   A   
Sbjct: 83  -PLHCAARIGHTNMVKLLLENN-ANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQA 140

Query: 505 LLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG----NRNAGGFYALHCAARRGDLDAV 560
            + K G T + ++            + E  LE+          G   LH A    +LD V
Sbjct: 141 CMTKKGFTPLHVAAKYGKVR-----VAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIV 195

Query: 561 RLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKN 620
           +LL  RG   + P  +GYTPL +AA++    +   L+  G   + ++ +G T L LA + 
Sbjct: 196 KLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQE 255

Query: 621 SSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTP 657
                        E+  +L+    +     K G  TP
Sbjct: 256 GHA----------EMVALLLSKQANGNLGNKSGL-TP 281

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 95.3 bits (238), Expect = 6e-21
 Identities = 65/312 (20%), Positives = 107/312 (34%), Gaps = 73/312 (23%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGA 136
           K+ +T L +A H  N+ +VK LL  G   +   + G+    IA ++  +E+   LL+ G 
Sbjct: 177 KNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGG 236

Query: 137 SQPACEE----ALLEASCHGQARLAELLM--GSDLIRPHVAVHS--------LVTACCRG 182
           S  A        L  A+  G A +  LL+   ++        +         L      G
Sbjct: 237 SANAESVQGVTPLHLAAQEGHAEMVALLLSKQAN-------GNLGNKSGLTPLHLVAQEG 289

Query: 183 FVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGAN 242
            V V D L+K GV ++AT               +  + L  A     + +V+ LLQ  A+
Sbjct: 290 HVPVADVLIKHGVMVDATT-------------RMGYTPLHVASHYGNIKLVKFLLQHQAD 336

Query: 243 TDMKVRLGAWSWDTTTGEEFRVGAGLAEP--YAITWCAVEYFEITGSILRMLLQH-LSYN 299
            + K +LG     +              P   A      +       I+ +LL++  S N
Sbjct: 337 VNAKTKLG----YS--------------PLHQAAQQGHTD-------IVTLLLKNGASPN 371

Query: 300 SP-HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQS 358
                G T L  A   G      VL     +    + + K                 V  
Sbjct: 372 EVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFPE---------TVDE 422

Query: 359 LIDSGCDLNTKT 370
           ++D   D   + 
Sbjct: 423 ILDVSEDEGEEL 434

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  168 bits (429), Expect = 2e-47
 Identities = 58/321 (18%), Positives = 97/321 (30%), Gaps = 59/321 (18%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
            G T LH A++      +  LL   A  +            +HLAA LG ++ V+ L  +
Sbjct: 8   DGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAA 67

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGF 422
           G  +      G TAL ++ + +   C  VL +                            
Sbjct: 68  GAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPS-----------------------H 104

Query: 423 QRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVM 482
            R   D   + +   + + +     +      +            L L+ ++ +G + + 
Sbjct: 105 PRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDW-RLQLEAENYDGHTPLH 163

Query: 483 VAASKGHVEVFRELVYAGADV-KLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRN 541
           VA      E+ R L  AGAD+ K     G+T                             
Sbjct: 164 VAVIHKDAEMVRLLRDAGADLNKPEPTCGRT----------------------------- 194

Query: 542 AGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGA 601
                 LH A        + LL   G         G TPL  A    +  +  LL ++GA
Sbjct: 195 -----PLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGA 249

Query: 602 VCDIKNARGETALSLARKNSS 622
                     +  S +  +S 
Sbjct: 250 PEPEDGGDKLSPCSSSGSDSD 270

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  121 bits (305), Expect = 1e-30
 Identities = 41/293 (13%), Positives = 77/293 (26%), Gaps = 67/293 (22%)

Query: 366 LNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRA 425
               TE G+TAL ++  ++ E  +  L    A    +         +             
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYL--------DLQNDLGQ------- 46

Query: 426 VLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAA 485
                              + L   A  G+ + ++ L       +   +  G +A+ +A 
Sbjct: 47  -------------------TALHLAAILGEASTVEKLYAA-GAGVLVAERGGHTALHLAC 86

Query: 486 SKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGF 545
                     L+          +      +    +                    +    
Sbjct: 87  RVRAHTCACVLLQPRPSH---PRDASDTYLTQSQDC-----------------TPDTSHA 126

Query: 546 YALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDI 605
            A   +    + +           +   + DG+TPL +A       M  LL   GA  + 
Sbjct: 127 PAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNK 186

Query: 606 KNA-RGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTP 657
                G T L LA +  +            V  +L+  G        GG+ TP
Sbjct: 187 PEPTCGRTPLHLAVEAQAA----------SVLELLLKAGADPTARMYGGR-TP 228

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  104 bits (263), Expect = 5e-25
 Identities = 55/302 (18%), Positives = 90/302 (29%), Gaps = 51/302 (16%)

Query: 118 IAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVT 177
           +AV   H   L+ LL   A     +      +  GQ  L            H+A      
Sbjct: 15  LAVIHQHEPFLDFLLGFSAGHEYLDLQ----NDLGQTAL------------HLA------ 52

Query: 178 ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL 237
               G    V+ L   G  +   +                 +AL  A   R  +   +LL
Sbjct: 53  -AILGEASTVEKLYAAGAGVLVAE-------------RGGHTALHLACRVRAHTCACVLL 98

Query: 238 QAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQH-L 296
           Q   +            DT   +        +   A                       L
Sbjct: 99  QPRPSHPRDAS------DTYLTQSQDCTPDTSHAPAAVDSQPNPENE---EEPRDEDWRL 149

Query: 297 SYNSP-HYGRTLLHHAILCGCTGAVAVLLSCGADA-QCPIRTQKTEFHPIHLAARLGYST 354
              +  + G T LH A++      V +L   GAD  +      +T   P+HLA     ++
Sbjct: 150 QLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRT---PLHLAVEAQAAS 206

Query: 355 IVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAG 414
           +++ L+ +G D   +   G T L  +         ++L   GA          S  S +G
Sbjct: 207 VLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSG 266

Query: 415 SN 416
           S+
Sbjct: 267 SD 268

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 86.8 bits (216), Expect = 5e-19
 Identities = 55/313 (17%), Positives = 90/313 (28%), Gaps = 77/313 (24%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGAD---VNQKLFRGFATT---IAVREGHLEILEILLKAG 135
           TAL LA    +   +  LL   A    ++ +   G   T   +A   G    +E L  AG
Sbjct: 11  TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQ--TALHLAAILGEASTVEKLYAAG 68

Query: 136 ASQPACEE----ALLEASCHGQARLAELL-----------------MGSDLIRPHVAVHS 174
           A     E     AL  A        A +L                    D         +
Sbjct: 69  AGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPA 128

Query: 175 LVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQ 234
            V +      +         + + A +                 + L  AV+ +   +V+
Sbjct: 129 AVDSQPNPENEEEPRDEDWRLQLEAEN-------------YDGHTPLHVAVIHKDAEMVR 175

Query: 235 LLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAIT--WCAVEYFEITGS--ILR 290
           LL  AGA+ +          + T G               T    AVE      +  +L 
Sbjct: 176 LLRDAGADLNKP--------EPTCGR--------------TPLHLAVEA----QAASVLE 209

Query: 291 MLLQH-LSYNSP-HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAA 348
           +LL+      +  + GRT L  A+L        +L + GA        + +   P   + 
Sbjct: 210 LLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLS---PCSSSG 266

Query: 349 RLGYSTIVQSLID 361
               S       +
Sbjct: 267 SDSDSDNRDEGDE 279

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  168 bits (429), Expect = 1e-46
 Identities = 75/318 (23%), Positives = 114/318 (35%), Gaps = 57/318 (17%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
              T LH A        V +LL  GAD     +       P+H A   G+  + + L+  
Sbjct: 57  RKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLV---PLHNACSYGHYEVTELLLKH 113

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGF 422
           G  +N       T L  +A   + E   +L   GAD  LV+  G+SA  +A +       
Sbjct: 114 GACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTP----EL 169

Query: 423 QRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVM 482
           +  +    +               L+  A+  D+A +K  +  E +    Q  +  +A+ 
Sbjct: 170 RERLTYEFKGH------------SLLQAAREADLAKVKKTLALE-IINFKQPQSHETALH 216

Query: 483 VAASKGH---VEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGN 539
            A +  H    +V   L+  GA+V   NK   T                           
Sbjct: 217 CAVASLHPKRKQVAELLLRKGANVNEKNKDFMTP-------------------------- 250

Query: 540 RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISN 599
                   LH AA R   D + +L   G  +N  D  G T L  AA  GH   C LL+S 
Sbjct: 251 --------LHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSY 302

Query: 600 GAVCDIKNARGETALSLA 617
           G+   I + +G TA  + 
Sbjct: 303 GSDPSIISLQGFTAAQMG 320

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  164 bits (419), Expect = 3e-45
 Identities = 71/363 (19%), Positives = 116/363 (31%), Gaps = 77/363 (21%)

Query: 303 YGRTLLHH-AILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLID 361
           Y +  L   A        +A+L     +       + T   P+HLAA      IVQ L+ 
Sbjct: 23  YKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKST---PLHLAAGYNRVRIVQLLLQ 79

Query: 362 SGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSI-AGSNWWSV 420
            G D++ K + G   L  +  Y   E  ++L K GA              + A   W   
Sbjct: 80  HGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGAC-------------VNAMDLWQ-- 124

Query: 421 GFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSA 480
                                  F+PL   A    +     L+     +    + +G SA
Sbjct: 125 -----------------------FTPLHEAASKNRVEVCSLLLSH-GADPTLVNCHGKSA 160

Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG-- 538
           V +A +    E           +      G + +  +            + +    +   
Sbjct: 161 VDMAPTPELRER----------LTYEF-KGHSLLQAAREADL-----AKVKKTLALEIIN 204

Query: 539 -NRNAGGFYALHCAARRG---DLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCE 594
             +      ALHCA             LL  +G  VN  + D  TPL +AA   H  + E
Sbjct: 205 FKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVME 264

Query: 595 LLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGK 654
           +L  +GA  +  ++ G+TAL  A     +          +  R+L+  G      +  G 
Sbjct: 265 VLHKHGAKMNALDSLGQTALHRAALAGHL----------QTCRLLLSYGSDPSIISLQGF 314

Query: 655 GTP 657
            T 
Sbjct: 315 -TA 316

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  137 bits (348), Expect = 1e-35
 Identities = 71/412 (17%), Positives = 123/412 (29%), Gaps = 84/412 (20%)

Query: 190 LMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRL 249
           L         T       L            L AA    +  ++ LL     N       
Sbjct: 10  LADPSAKAVLTGEYKKDEL------------LEAARSGNEEKLMALLTPLNVNCHASDGR 57

Query: 250 GAWSWDTTTGEEFRVGAGLAEPYAIT--WCAVEYFEITGS--ILRMLLQHLSY-NSP-HY 303
                                    T    A  Y        I+++LLQH +  ++    
Sbjct: 58  K-----------------------STPLHLAAGY----NRVRIVQLLLQHGADVHAKDKG 90

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
           G   LH+A   G      +LL  GA        Q T   P+H AA      +   L+  G
Sbjct: 91  GLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFT---PLHEAASKNRVEVCSLLLSHG 147

Query: 364 CDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQ 423
            D       G++A+ ++   +  E +                G S    A          
Sbjct: 148 ADPTLVNCHGKSAVDMAPTPELRERLTYE-----------FKGHSLLQAAREA----DLA 192

Query: 424 RAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAAL---KALIGREELNLDYQDDNGFSA 480
           +    +       K       + L     +         + L+ +   N++ ++ +  + 
Sbjct: 193 KVKKTLALEIINFKQPQSH-ETALHCAVASLHPKRKQVAELLLRKG-ANVNEKNKDFMTP 250

Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG-N 539
           + VAA + H +V   L   GA +  L+  G+TA+  + L  +            L  G +
Sbjct: 251 LHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQ-----TCRLLLSYGSD 305

Query: 540 RNAG---GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREG 588
            +     GF A          +AV+ + S    +   D D    L+ A++ G
Sbjct: 306 PSIISLQGFTAAQMGN-----EAVQQILSESTPMRTSDVDY--RLLEASKAG 350

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  122 bits (310), Expect = 1e-30
 Identities = 64/356 (17%), Positives = 114/356 (32%), Gaps = 77/356 (21%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLL-STGADVNQKLFRGF-ATTIAVREGHLEILEILLKAG 135
           +     L  AA SGN   +  LL     + +    R      +A     + I+++LL+ G
Sbjct: 22  EYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHG 81

Query: 136 ASQPACEE----ALLEASCHGQARLAELL---------MGSDLIRP-HVAVHSLVTACCR 181
           A   A ++     L  A  +G   + ELL         M      P H A         +
Sbjct: 82  ADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAAS-------K 134

Query: 182 GFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGA 241
             V+V   L+  G D    +                 SA+  A        +    +  +
Sbjct: 135 NRVEVCSLLLSHGADPTLVN-------------CHGKSAVDMAPTPELRERLTYEFKGHS 181

Query: 242 NTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLS-YNS 300
                                           +             + + L   +  +  
Sbjct: 182 -------------------------------LLQAAREADLAK---VKKTLALEIINFKQ 207

Query: 301 PHYGRTLLHHAILCGCTGAVAV---LLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQ 357
           P    T LH A+         V   LL  GA+     +   T   P+H+AA   ++ +++
Sbjct: 208 PQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMT---PLHVAAERAHNDVME 264

Query: 358 SLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIA 413
            L   G  +N     G+TAL  +A     +  ++L   G+D  ++S+ G +A+ + 
Sbjct: 265 VLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG 320

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  116 bits (292), Expect = 2e-28
 Identities = 40/209 (19%), Positives = 71/209 (33%), Gaps = 30/209 (14%)

Query: 469 NLDYQDDNGFSAVMVAASKGHVEVFRE-LVYAGADVKLLNKSGKTAIMLSELNQNCDLFE 527
                 +     ++ AA  G+ E     L     +    +    T + L+          
Sbjct: 16  KAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVR--- 72

Query: 528 KVMLEFALEKG-NRNA---GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLML 583
             +++  L+ G + +A   GG   LH A   G  +   LL   G  VN  D   +TPL  
Sbjct: 73  --IVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHE 130

Query: 584 AAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILD---------- 633
           AA +    +C LL+S+GA   + N  G++A+ +A          E +  +          
Sbjct: 131 AASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMA----PTPELRERLTYEFKGHSLLQAA 186

Query: 634 -----EVARMLVLGGGHVLKHTKGGKGTP 657
                   +  +       K  +  + T 
Sbjct: 187 READLAKVKKTLALEIINFKQPQSHE-TA 214

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  109 bits (275), Expect = 4e-26
 Identities = 48/321 (14%), Positives = 85/321 (26%), Gaps = 102/321 (31%)

Query: 359 LIDSGCDLNTKTESGETALMISAKYK-QEECVKVLAKAGADFGLVSVSGQSASSIAGSNW 417
           L D         E  +  L+ +A+   +E+ + +L     +                   
Sbjct: 10  LADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKS---------- 59

Query: 418 WSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNG 477
                                      +PL   A    +  ++ L+     ++  +D  G
Sbjct: 60  ---------------------------TPLHLAAGYNRVRIVQLLLQHGA-DVHAKDKGG 91

Query: 478 FSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEK 537
              +  A S GH EV   L+  GA V  ++    T                         
Sbjct: 92  LVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFT------------------------- 126

Query: 538 GNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLI 597
                     LH AA +  ++   LL S G    + +  G + + +A             
Sbjct: 127 ---------PLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEF 177

Query: 598 SN---------------------GAVCDIKNARGETALSLARKNSSMKNDAELVILDEVA 636
                                    +   +    ETAL  A  +   K         +VA
Sbjct: 178 KGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKR-------KQVA 230

Query: 637 RMLVLGGGHVLKHTKGGKGTP 657
            +L+  G +V +  K    TP
Sbjct: 231 ELLLRKGANVNEKNKDFM-TP 250

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  109 bits (274), Expect = 5e-26
 Identities = 71/445 (15%), Positives = 130/445 (29%), Gaps = 122/445 (27%)

Query: 88  AHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKAGASQPACEE- 143
              G   L   L    A                 A      +++ +L     +  A +  
Sbjct: 1   GEFGKSALD--LADPSAKAVLTGEYKK-DELLEAARSGNEEKLMALLTPLNVNCHASDGR 57

Query: 144 ---ALLEASCHGQARLAELLM--GSDLIRPHVAVHS--------LVTACCRGFVDVVDTL 190
               L  A+ + + R+ +LL+  G+D       VH+        L  AC  G  +V + L
Sbjct: 58  KSTPLHLAAGYNRVRIVQLLLQHGAD-------VHAKDKGGLVPLHNACSYGHYEVTELL 110

Query: 191 MKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLG 250
           +K G  +NA D                 + L  A    +V V  LLL  GA+  +    G
Sbjct: 111 LKHGACVNAMD-------------LWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHG 157

Query: 251 AWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHH 310
             S                   A+              L    +         G +LL  
Sbjct: 158 -KS-------------------AVDMAPTPELR---ERLTYEFK---------GHSLLQA 185

Query: 311 AILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYST---IVQSLIDSGCDLN 367
           A        V   L+         +  ++    +H A    +     + + L+  G ++N
Sbjct: 186 AREADLA-KVKKTLALEII---NFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVN 241

Query: 368 TKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVL 427
            K +   T L ++A+    + ++VL K GA    +   GQ                    
Sbjct: 242 EKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQ-------------------- 281

Query: 428 DIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASK 487
                            + L   A AG +   + L+     +       GF+A  +    
Sbjct: 282 -----------------TALHRAALAGHLQTCRLLLSY-GSDPSIISLQGFTAAQMGN-- 321

Query: 488 GHVEVFRELVYAGADVKLLNKSGKT 512
              E  ++++     ++  +   + 
Sbjct: 322 ---EAVQQILSESTPMRTSDVDYRL 343

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 91.8 bits (229), Expect = 4e-20
 Identities = 40/259 (15%), Positives = 79/259 (30%), Gaps = 68/259 (26%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
           +G++ +  A        +       +                  AAR      V+  +  
Sbjct: 156 HGKSAVDMAPTPELRERLTYEFKGHSL---------------LQAAREADLAKVKKTLAL 200

Query: 363 GCDLNTKTESGETALMISAK---YKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWS 419
                 + +S ETAL  +      K+++  ++L + GA+    +    +           
Sbjct: 201 EIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMT----------- 249

Query: 420 VGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFS 479
                                     PL   A+      ++ L       ++  D  G +
Sbjct: 250 --------------------------PLHVAAERAHNDVMEVLHKHGA-KMNALDSLGQT 282

Query: 480 AVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG- 538
           A+  AA  GH++  R L+  G+D  +++  G TA  +   N+             L +  
Sbjct: 283 ALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG--NEAVQQI--------LSEST 332

Query: 539 NRNAG-GFYALHCAARRGD 556
                   Y L  A++ GD
Sbjct: 333 PMRTSDVDYRLLEASKAGD 351

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 77.1 bits (191), Expect = 2e-15
 Identities = 29/138 (21%), Positives = 41/138 (29%), Gaps = 39/138 (28%)

Query: 494 RELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAAR 553
            +L    A   L  +  K                                    L  AAR
Sbjct: 8   LDLADPSAKAVLTGEYKKD----------------------------------ELLEAAR 33

Query: 554 RGDLDA-VRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGET 612
            G+ +  + LLT      +  DG   TPL LAA      + +LL+ +GA    K+  G  
Sbjct: 34  SGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLV 93

Query: 613 ALSLARKNSSMKNDAELV 630
            L  A          E+ 
Sbjct: 94  PLHNA----CSYGHYEVT 107

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 61.4 bits (150), Expect = 3e-10
 Identities = 31/189 (16%), Positives = 57/189 (30%), Gaps = 43/189 (22%)

Query: 76  EFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGH---LEILEIL 131
            ++    +L  AA   ++  VKK L+      ++      A   AV   H    ++ E+L
Sbjct: 174 TYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELL 233

Query: 132 LKAGASQPACEE----ALLEASCHGQARLAELLM--GSDLIRPHVAVHS--------LVT 177
           L+ GA+     +     L  A+      + E+L   G+        +++        L  
Sbjct: 234 LRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAK-------MNALDSLGQTALHR 286

Query: 178 ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL 237
           A   G +     L+  G D +                    +A            VQ +L
Sbjct: 287 AALAGHLQTCRLLLSYGSDPSIIS-------------LQGFTAAQMG-----NEAVQQIL 328

Query: 238 QAGANTDMK 246
                    
Sbjct: 329 SESTPMRTS 337

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 59.0 bits (144), Expect = 2e-09
 Identities = 21/99 (21%), Positives = 32/99 (32%), Gaps = 12/99 (12%)

Query: 560 VRLLTSRGYGVNVPDGDGYTPLMLAAREGHGP-MCELLISNGAVCDIKNARGETALSLAR 618
              L        +        L+ AAR G+   +  LL      C   + R  T L LA 
Sbjct: 7   ALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAA 66

Query: 619 KNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTP 657
             + +           + ++L+  G  V    KGG   P
Sbjct: 67  GYNRV----------RIVQLLLQHGADVHAKDKGGL-VP 94

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 41.7 bits (99), Expect = 6e-04
 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 6/73 (8%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPAC 141
           TAL  AA +G++   + LLS G+D +    +GF    A + G+ E ++ +L         
Sbjct: 282 TALHRAALAGHLQTCRLLLSYGSDPSIISLQGF---TAAQMGN-EAVQQILSESTPMRTS 337

Query: 142 EE--ALLEASCHG 152
           +    LLEAS  G
Sbjct: 338 DVDYRLLEASKAG 350

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  165 bits (420), Expect = 5e-46
 Identities = 61/324 (18%), Positives = 109/324 (33%), Gaps = 61/324 (18%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
             +         G    +   +          + +  +      A   G +  V  L++ 
Sbjct: 7   KQKRNEQLKRWIGSETDLEPPVVKRKK----TKVKFDDGAVFLAACSSGDTEEVLRLLER 62

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSI-AGSNWWSVG 421
           G D+N     G TAL  +      + VK L + GA+             I    N     
Sbjct: 63  GADINYANVDGLTALHQACIDDNVDMVKFLVENGAN-------------INQPDNEG--- 106

Query: 422 FQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAV 481
                                 + PL   A  G +   + LI +   ++   +  G + +
Sbjct: 107 ----------------------WIPLHAAASCGYLDIAEYLISQGA-HVGAVNSEGDTPL 143

Query: 482 MVAASKGHVEVFRELV-YAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGN- 539
            +A  +   E+ +  V   G D++   K  +  ++            +   ++       
Sbjct: 144 DIAEEEAMEELLQNEVNRQGVDIEAARKEEERIML------------RDARQWLNSGHIN 191

Query: 540 ---RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELL 596
                  G  ALH AA +G  + ++LL    Y VN+ D DG+TPL  AA  G    C +L
Sbjct: 192 DVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRIL 251

Query: 597 ISNGAVCDIKNARGETALSLARKN 620
           + N    +  N  G+TA  +A ++
Sbjct: 252 VENLCDMEAVNKVGQTAFDVADED 275

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  118 bits (299), Expect = 1e-29
 Identities = 53/332 (15%), Positives = 100/332 (30%), Gaps = 66/332 (19%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPAC 141
               L    G+ T ++  +        K   G     A   G  E +  LL+ GA     
Sbjct: 10  RNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYA 69

Query: 142 EE----ALLEASCHGQARLAELLM--GSDLIRPHVAVHS--------LVTACCRGFVDVV 187
                 AL +A       + + L+  G++       ++         L  A   G++D+ 
Sbjct: 70  NVDGLTALHQACIDDNVDMVKFLVENGAN-------INQPDNEGWIPLHAAASCGYLDIA 122

Query: 188 DTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKV 247
           + L+  G  + A +             +   + L  A       ++Q  +          
Sbjct: 123 EYLISQGAHVGAVN-------------SEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAA 169

Query: 248 RLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNS-PHYGRT 306
           R                   L +       A ++             H++       G T
Sbjct: 170 RKEEER------------IMLRD-------ARQWL---------NSGHINDVRHAKSGGT 201

Query: 307 LLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDL 366
            LH A   G T  + +L+    D         T   P+H AA  G     + L+++ CD+
Sbjct: 202 ALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWT---PLHAAAHWGKEEACRILVENLCDM 258

Query: 367 NTKTESGETALMISAKYKQEECVKVLAKAGAD 398
               + G+TA  ++ +       ++  K    
Sbjct: 259 EAVNKVGQTAFDVADEDILGYLEELQKKQNLL 290

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  108 bits (273), Expect = 2e-26
 Identities = 46/209 (22%), Positives = 74/209 (35%), Gaps = 28/209 (13%)

Query: 470 LDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKV 529
           +   D        +    G        V      K+    G   +               
Sbjct: 1   MKMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGD------TE 54

Query: 530 MLEFALEKG----NRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAA 585
            +   LE+G      N  G  ALH A    ++D V+ L   G  +N PD +G+ PL  AA
Sbjct: 55  EVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAA 114

Query: 586 REGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMK-----------------NDAE 628
             G+  + E LIS GA     N+ G+T L +A + +  +                  + E
Sbjct: 115 SCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEE 174

Query: 629 LVILDEVARMLVLGGGHVLKHTKGGKGTP 657
            ++L +  + L  G  + ++H K G  T 
Sbjct: 175 RIMLRDARQWLNSGHINDVRHAKSGG-TA 202

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 80.6 bits (200), Expect = 1e-16
 Identities = 59/359 (16%), Positives = 112/359 (31%), Gaps = 90/359 (25%)

Query: 173 HSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSV 232
            +       G    ++  +                         D +  +AA  S     
Sbjct: 10  RNEQLKRWIGSETDLEPPVVKRKKTKVKFD--------------DGAVFLAACSSGDTEE 55

Query: 233 VQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVE-YFEITGSILRM 291
           V  LL+ GA+ +     G     T                A+    ++   ++     + 
Sbjct: 56  VLRLLERGADINYANVDG----LT----------------ALHQACIDDNVDMV----KF 91

Query: 292 LLQH-LSYNSP-HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAAR 349
           L+++  + N P + G   LH A  CG       L+S GA          T   P+ +A  
Sbjct: 92  LVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDT---PLDIAEE 148

Query: 350 LGYSTIVQSLIDSGC-DLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQS 408
                ++Q+ ++    D+    +  E  ++        +  + L     +    + SG  
Sbjct: 149 EAMEELLQNEVNRQGVDIEAARKEEERIMLR-------DARQWLNSGHINDVRHAKSGG- 200

Query: 409 ASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREEL 468
                                               + L   A  G    LK LI     
Sbjct: 201 ------------------------------------TALHVAAAKGYTEVLKLLIQA-RY 223

Query: 469 NLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFE 527
           +++ +D +G++ +  AA  G  E  R LV    D++ +NK G+TA  +++ +    L E
Sbjct: 224 DVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEE 282

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 56.0 bits (136), Expect = 1e-08
 Identities = 27/90 (30%), Positives = 36/90 (40%), Gaps = 9/90 (10%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKA 134
           KS  TAL +AA  G   ++K L+    DVN K + G+  T    A   G  E   IL++ 
Sbjct: 197 KSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGW--TPLHAAAHWGKEEACRILVEN 254

Query: 135 GASQPACEE----ALLEASCHGQARLAELL 160
                A  +    A   A       L EL 
Sbjct: 255 LCDMEAVNKVGQTAFDVADEDILGYLEELQ 284

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  164 bits (418), Expect = 6e-46
 Identities = 76/319 (23%), Positives = 121/319 (37%), Gaps = 55/319 (17%)

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
              LL  A+       V  LL  GA+     + ++  + P+H A ++    IV+ L+  G
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLLEGGANVN--FQEEEGGWTPLHNAVQMSREDIVELLLRHG 62

Query: 364 CDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQ 423
            D   + ++G T  +++A     + +K+    GAD       G +               
Sbjct: 63  ADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFT--------------- 107

Query: 424 RAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALI---------GREELNLDYQD 474
                                   M  A  G + ALK L           + + + +   
Sbjct: 108 ----------------------AFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLR 145

Query: 475 DNGFSAVMVAASKGHVEVFRELV-YAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEF 533
             G +A+M AA KGHVEV + L+   GADV   +  G+ A++ + L+ +    E +    
Sbjct: 146 KGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAIT-HL 204

Query: 534 ALEKG---N-RNAGGFYALHCAARRGDLDAVR-LLTSRGYGVNVPDGDGYTPLMLAAREG 588
            L+ G   N R   G   L  A  +  L  V+ LL      +N  D DG T L+LA    
Sbjct: 205 LLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELK 264

Query: 589 HGPMCELLISNGAVCDIKN 607
              + ELL   GA  D  +
Sbjct: 265 LKKIAELLCKRGASTDCGD 283

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  140 bits (355), Expect = 2e-37
 Identities = 67/294 (22%), Positives = 111/294 (37%), Gaps = 72/294 (24%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKT-ESGETALMISAKYKQEECVKVLAKAGADFGL 401
            +  A +     +VQ L++ G ++N +  E G T L  + +  +E+ V++L + GAD  L
Sbjct: 8   LLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVL 67

Query: 402 VSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKA 461
              +G +                                     P +  A AG +  LK 
Sbjct: 68  RKKNGAT-------------------------------------PFLLAAIAGSVKLLKL 90

Query: 462 LIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQ 521
            + +   +++  D  GF+A M AA  G V+  + L   GA+V L  K+ +          
Sbjct: 91  FLSKGA-DVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKED--------- 140

Query: 522 NCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTS-RGYGVNVPDGDGYTP 580
                          +     GG  AL  AA +G ++ +++L    G  VN  D  G   
Sbjct: 141 ---------------QERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNA 185

Query: 581 LMLAAREGHGPMC----ELLISNGAVCDIKNARGETALSLARKNSSMKNDAELV 630
           L+ A              LL+ +GA  +++  RG+T L LA      K    LV
Sbjct: 186 LIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILA----VEKKHLGLV 235

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  122 bits (309), Expect = 4e-31
 Identities = 75/335 (22%), Positives = 127/335 (37%), Gaps = 73/335 (21%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFAT--TIAVREGHLEILEILLKAG 135
             D   L  A  + +V LV++LL  GA+VN +   G  T    AV+    +I+E+LL+ G
Sbjct: 3   VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG 62

Query: 136 ASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGV 195
           A     ++       +G                         A   G V ++   +  G 
Sbjct: 63  ADPVLRKK-------NGA----------------TPFLL---AAIAGSVKLLKLFLSKGA 96

Query: 196 DINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWD 255
           D+N  D                 +A + A V  +V  ++ L + GAN +++ +       
Sbjct: 97  DVNECD-------------FYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQER 143

Query: 256 TTTGEEFRVGAGLAEPYAIT--WCAVEYFEITGS--ILRMLLQHLSYN---SPHYGRTLL 308
              G               T    A E     G   +L++LL  +  +     + GR  L
Sbjct: 144 LRKGGA-------------TALMDAAEK----GHVEVLKILLDEMGADVNACDNMGRNAL 186

Query: 309 HHAILCGCTGA----VAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS-G 363
            HA+L            +LL  GAD        KT   P+ LA    +  +VQ L++   
Sbjct: 187 IHALLSSDDSDVEAITHLLLDHGADVNVRGERGKT---PLILAVEKKHLGLVQRLLEQEH 243

Query: 364 CDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
            ++N     G+TAL+++ + K ++  ++L K GA 
Sbjct: 244 IEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS 278

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  112 bits (284), Expect = 8e-28
 Identities = 48/269 (17%), Positives = 85/269 (31%), Gaps = 82/269 (30%)

Query: 373 GETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRS 432
               L+ + + +  + V+ L + GA                                   
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLLEGGA----------------------------------- 29

Query: 433 GNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEV 492
            N+        ++PL    Q      ++ L+     +   +  NG +  ++AA  G V++
Sbjct: 30  -NVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA-DPVLRKKNGATPFLLAAIAGSVKL 87

Query: 493 FRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAA 552
            +  +  GADV   +  G T                                  A   AA
Sbjct: 88  LKLFLSKGADVNECDFYGFT----------------------------------AFMEAA 113

Query: 553 RRGDLDAVRLLTSRGYGVNVPDGD----------GYTPLMLAAREGHGPMCELLISN-GA 601
             G + A++ L  RG  VN+              G T LM AA +GH  + ++L+   GA
Sbjct: 114 VYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGA 173

Query: 602 VCDIKNARGETALSLARKNSSMKNDAELV 630
             +  +  G  AL  A  +S   +   + 
Sbjct: 174 DVNACDNMGRNALIHALLSSDDSDVEAIT 202

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  103 bits (259), Expect = 1e-24
 Identities = 43/211 (20%), Positives = 72/211 (34%), Gaps = 56/211 (26%)

Query: 445 SPLMFVAQAGDIAALKALIGREELNLDYQD-DNGFSAVMVAASKGHVEVFRELVYAGADV 503
             L+   Q  D+  ++ L+     N+++Q+ + G++ +  A      ++   L+  GAD 
Sbjct: 7   HLLIKAVQNEDVDLVQQLLEGG-ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP 65

Query: 504 KLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLL 563
            L  K+G T                                      AA  G +  ++L 
Sbjct: 66  VLRKKNGATP----------------------------------FLLAAIAGSVKLLKLF 91

Query: 564 TSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGA----------VCDIKNARGETA 613
            S+G  VN  D  G+T  M AA  G     + L   GA            +     G TA
Sbjct: 92  LSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATA 151

Query: 614 LSLARKNSSMKNDAELVILDEVARMLVLGGG 644
           L  A +   +          EV ++L+   G
Sbjct: 152 LMDAAEKGHV----------EVLKILLDEMG 172

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 84.4 bits (210), Expect = 4e-18
 Identities = 61/288 (21%), Positives = 103/288 (35%), Gaps = 70/288 (24%)

Query: 72  VEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEI 130
           V F+E +   T L  A       +V+ LL  GAD   +   G     +A   G +++L++
Sbjct: 31  VNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKL 90

Query: 131 LLKAGASQPACEE----ALLEASCHGQARLAELLM---------GSDLIRPHVAVHSLVT 177
            L  GA    C+     A +EA+ +G+ +  + L                         T
Sbjct: 91  FLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGAT 150

Query: 178 ----ACCRGFVDVVDTLM-KCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVS- 231
               A  +G V+V+  L+ + G D+NA D             N+  +AL+ A++S   S 
Sbjct: 151 ALMDAAEKGHVEVLKILLDEMGADVNACD-------------NMGRNALIHALLSSDDSD 197

Query: 232 ---VVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAIT--WCAVEYFEITG 286
              +  LLL  GA+ +++   G                        T    AVE      
Sbjct: 198 VEAITHLLLDHGADVNVRGERGK-----------------------TPLILAVEK----K 230

Query: 287 S--ILRMLLQHLSYN---SPHYGRTLLHHAILCGCTGAVAVLLSCGAD 329
              +++ LL+        +   G+T L  A+         +L   GA 
Sbjct: 231 HLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS 278

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 74.0 bits (183), Expect = 1e-14
 Identities = 50/196 (25%), Positives = 80/196 (40%), Gaps = 51/196 (26%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT-----------IAVREGHLEILEI 130
           TA   AA  G V  +K L   GA+VN +                    A  +GH+E+L+I
Sbjct: 107 TAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKI 166

Query: 131 LL-KAGASQPACEE----ALLEASCHGQAR----LAELLM--GSDLIRPHVAVHS----- 174
           LL + GA   AC+     AL+ A           +  LL+  G+D       V+      
Sbjct: 167 LLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD-------VNVRGERG 219

Query: 175 ---LVTACCRGFVDVVDTLM-KCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQV 230
              L+ A  +  + +V  L+ +  ++IN TD             +   +AL+ AV  +  
Sbjct: 220 KTPLILAVEKKHLGLVQRLLEQEHIEINDTD-------------SDGKTALLLAVELKLK 266

Query: 231 SVVQLLLQAGANTDMK 246
            + +LL + GA+TD  
Sbjct: 267 KIAELLCKRGASTDCG 282

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 61.3 bits (150), Expect = 2e-10
 Identities = 36/138 (26%), Positives = 51/138 (36%), Gaps = 22/138 (15%)

Query: 82  TALFLAAHSGNVTLVKKLLS-TGADVNQKLFRGF-ATTIAVREGH----LEILEILLKAG 135
           TAL  AA  G+V ++K LL   GADVN     G  A   A+          I  +LL  G
Sbjct: 150 TALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG 209

Query: 136 ASQPACEE----ALLEASCHGQARLAELLMGSDLIRPHVAVHS--------LVTACCRGF 183
           A      E     L+ A       L + L    L + H+ ++         L+ A     
Sbjct: 210 ADVNVRGERGKTPLILAVEKKHLGLVQRL----LEQEHIEINDTDSDGKTALLLAVELKL 265

Query: 184 VDVVDTLMKCGVDINATD 201
             + + L K G   +  D
Sbjct: 266 KKIAELLCKRGASTDCGD 283

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  159 bits (404), Expect = 1e-44
 Identities = 63/289 (21%), Positives = 107/289 (37%), Gaps = 72/289 (24%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
           P+H AA  G+  I   L+ +G +++T +E   T LM +A+    E VK L KAGA     
Sbjct: 14  PLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPK 73

Query: 403 SVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKAL 462
              G +                                      L   A+ G    ++ L
Sbjct: 74  DAEGST-------------------------------------CLHLAAKKGHYEVVQYL 96

Query: 463 IGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQN 522
           +   +++++ QDD G++ ++ A    HV++ + L+  G+D+ + +               
Sbjct: 97  LSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENIC--------- 147

Query: 523 CDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLM 582
                                    LH AA  G +D   +L +    ++  +  G +PL 
Sbjct: 148 -------------------------LHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLH 182

Query: 583 LAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVI 631
           +AARE       L +S  +   +KN  GET L  A  NS     A  + 
Sbjct: 183 IAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQ-VWSALQMS 230

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  143 bits (364), Expect = 5e-39
 Identities = 56/299 (18%), Positives = 100/299 (33%), Gaps = 74/299 (24%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
             R+ LH A   G      +L+  GA+       Q+T   P+  AA   +   V+ LI +
Sbjct: 10  NKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRT---PLMEAAENNHLEAVKYLIKA 66

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGF 422
           G  ++ K   G T L ++AK    E V+ L   G                          
Sbjct: 67  GALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQ------------------------- 101

Query: 423 QRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVM 482
                      ++    +   ++P+++  +   +  +K L+ +   +++ +D+     + 
Sbjct: 102 ----------MDVNCQDDGG-WTPMIWATEYKHVDLVKLLLSK-GSDINIRDNEENICLH 149

Query: 483 VAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNA 542
            AA  G V++   L+ A  D+  +N  G +                              
Sbjct: 150 WAAFSGCVDIAEILLAAKCDLHAVNIHGDS------------------------------ 179

Query: 543 GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGA 601
                LH AAR    D V L  SR   V + + +G TPL  A+          +     
Sbjct: 180 ----PLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKALQ 234

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  120 bits (303), Expect = 7e-31
 Identities = 54/294 (18%), Positives = 98/294 (33%), Gaps = 84/294 (28%)

Query: 365 DLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQR 424
           +   + ++  + L  +A+    +   +L +AGA+                 +        
Sbjct: 3   NFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANI-----------DTCSEDQR------ 45

Query: 425 AVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVA 484
                               +PLM  A+   + A+K LI      +D +D  G + + +A
Sbjct: 46  --------------------TPLMEAAENNHLEAVKYLIKA-GALVDPKDAEGSTCLHLA 84

Query: 485 ASKGHVEVFRELVYAGA-DVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAG 543
           A KGH EV + L+  G  DV   +  G T                               
Sbjct: 85  AKKGHYEVVQYLLSNGQMDVNCQDDGGWT------------------------------- 113

Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC 603
               +  A     +D V+LL S+G  +N+ D +    L  AA  G   + E+L++     
Sbjct: 114 ---PMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDL 170

Query: 604 DIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTP 657
              N  G++ L +A + +            +   + +     V    K G+ TP
Sbjct: 171 HAVNIHGDSPLHIAARENRY----------DCVVLFLSRDSDVTLKNKEGE-TP 213

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 92.5 bits (231), Expect = 3e-21
 Identities = 47/228 (20%), Positives = 83/228 (36%), Gaps = 50/228 (21%)

Query: 178 ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL 237
           A   G VD+   L++ G +I+                    + L+ A  +  +  V+ L+
Sbjct: 18  AAEAGHVDICHMLVQAGANIDTCS-------------EDQRTPLMEAAENNHLEAVKYLI 64

Query: 238 QAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAIT--WCAVEYFEITGS--ILRMLL 293
           +AGA  D K   G+                       T    A +     G   +++ LL
Sbjct: 65  KAGALVDPKDAEGS-----------------------TCLHLAAKK----GHYEVVQYLL 97

Query: 294 QHLSYN---SPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARL 350
            +   +       G T +  A        V +LLS G+D       +      +H AA  
Sbjct: 98  SNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENI---CLHWAAFS 154

Query: 351 GYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
           G   I + L+ + CDL+     G++ L I+A+  + +CV +     +D
Sbjct: 155 GCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSD 202

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 89.0 bits (222), Expect = 4e-20
 Identities = 52/317 (16%), Positives = 91/317 (28%), Gaps = 92/317 (29%)

Query: 195 VDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSW 254
           ++                      S L AA  +  V +  +L+QAGAN D          
Sbjct: 2   MNFKMEH-------------QNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQ---- 44

Query: 255 DTTTGEEFRVGAGLAEPYAIT--WCAVEYFEITGS--ILRMLLQH-LSYNSP-HYGRTLL 308
                               T    A E          ++ L++     +     G T L
Sbjct: 45  -------------------RTPLMEAAEN----NHLEAVKYLIKAGALVDPKDAEGSTCL 81

Query: 309 HHAILCGCTGAVAVLLSCGA---DAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCD 365
           H A   G    V  LLS G    + Q         + P+  A    +  +V+ L+  G D
Sbjct: 82  HLAAKKGHYEVVQYLLSNGQMDVNCQ-----DDGGWTPMIWATEYKHVDLVKLLLSKGSD 136

Query: 366 LNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRA 425
           +N +       L  +A     +  ++L  A  D   V++ G S                 
Sbjct: 137 INIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDS----------------- 179

Query: 426 VLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAA 485
                               PL   A+      +   + R+  ++  ++  G + +  A+
Sbjct: 180 --------------------PLHIAARENRYDCVVLFLSRD-SDVTLKNKEGETPLQCAS 218

Query: 486 SKGHVEVFRELVYAGAD 502
               V    ++  A  D
Sbjct: 219 LNSQVWSALQMSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 80.5 bits (200), Expect = 3e-17
 Identities = 39/180 (21%), Positives = 66/180 (36%), Gaps = 34/180 (18%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPA 140
           + L  AA +G+V +   L+  GA+++            A    HLE ++ L+KAGA    
Sbjct: 13  SPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDP 72

Query: 141 CEE----ALLEASCHGQARLAELLMGSDLIRPHVAVH----------SLVTACCRGFVDV 186
            +      L  A+  G   + + L+       +  +            ++ A     VD+
Sbjct: 73  KDAEGSTCLHLAAKKGHYEVVQYLLS------NGQMDVNCQDDGGWTPMIWATEYKHVDL 126

Query: 187 VDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMK 246
           V  L+  G DIN  D             N +   L  A  S  V + ++LL A  +    
Sbjct: 127 VKLLLSKGSDINIRD-------------NEENICLHWAAFSGCVDIAEILLAAKCDLHAV 173

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 80.1 bits (199), Expect = 4e-17
 Identities = 24/98 (24%), Positives = 36/98 (36%), Gaps = 3/98 (3%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
                LH A   GC     +LL+   D         +   P+H+AAR      V   +  
Sbjct: 143 EENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDS---PLHIAARENRYDCVVLFLSR 199

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFG 400
             D+  K + GET L  ++   Q      ++KA  D  
Sbjct: 200 DSDVTLKNKEGETPLQCASLNSQVWSALQMSKALQDSA 237

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 79.0 bits (196), Expect = 1e-16
 Identities = 42/181 (23%), Positives = 73/181 (40%), Gaps = 36/181 (19%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPA 140
           T L  AA + ++  VK L+  GA V+ K   G     +A ++GH E+++ LL  G     
Sbjct: 46  TPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVN 105

Query: 141 CEE-----ALLEASCHGQARLAELLM--GSDLIRPHVAVHS--------LVTACCRGFVD 185
           C++      ++ A+ +    L +LL+  GSD       ++         L  A   G VD
Sbjct: 106 CQDDGGWTPMIWATEYKHVDLVKLLLSKGSD-------INIRDNEENICLHWAAFSGCVD 158

Query: 186 VVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDM 245
           + + L+    D++A +                 S L  A    +   V L L   ++  +
Sbjct: 159 IAEILLAAKCDLHAVN-------------IHGDSPLHIAARENRYDCVVLFLSRDSDVTL 205

Query: 246 K 246
           K
Sbjct: 206 K 206

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 72.8 bits (180), Expect = 2e-14
 Identities = 39/180 (21%), Positives = 68/180 (37%), Gaps = 40/180 (22%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGA-DVNQKLFRGFATT---IAVREGHLEILEILLKAGAS 137
           T L LAA  G+  +V+ LLS G  DVN +   G+  T    A    H++++++LL  G+ 
Sbjct: 79  TCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGW--TPMIWATEYKHVDLVKLLLSKGSD 136

Query: 138 QPACEE----ALLEASCHGQARLAELLM--GSDLIRPHVAVHS--------LVTACCRGF 183
               +      L  A+  G   +AE+L+    D       +H+        L  A     
Sbjct: 137 INIRDNEENICLHWAAFSGCVDIAEILLAAKCD-------LHAVNIHGDSPLHIAARENR 189

Query: 184 VDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANT 243
            D V   +    D+   +                 + L  A ++ QV     + +A  ++
Sbjct: 190 YDCVVLFLSRDSDVTLKN-------------KEGETPLQCASLNSQVWSALQMSKALQDS 236

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 57.8 bits (141), Expect = 2e-09
 Identities = 20/92 (21%), Positives = 34/92 (36%), Gaps = 9/92 (9%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKA 134
             +   L  AA SG V + + LL+   D++     G   +   IA RE   + + + L  
Sbjct: 142 NEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGD--SPLHIAARENRYDCVVLFLSR 199

Query: 135 GASQPACEE----ALLEASCHGQARLAELLMG 162
            +      +     L  AS + Q   A  +  
Sbjct: 200 DSDVTLKNKEGETPLQCASLNSQVWSALQMSK 231

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  162 bits (413), Expect = 2e-44
 Identities = 57/376 (15%), Positives = 106/376 (28%), Gaps = 89/376 (23%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
                +H A   G T  V  L+  G       R   T    +HLA + G     + L   
Sbjct: 19  ENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCT---ALHLACKFGCVDTAKYLASV 75

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGF 422
           G   +     G+  + ++    + + V  L +   + G                      
Sbjct: 76  GEVHSLW--HGQKPIHLAVMANKTDLVVALVEGAKERG---------------------- 111

Query: 423 QRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAG--DIAALKALIGREELNLDYQDDNGFSA 480
                                  P   + +    ++          E+    +   G +A
Sbjct: 112 ---------------------QMPESLLNECDEREVN---------EIGSHVKHCKGQTA 141

Query: 481 VMVAASKG--HVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG 538
           +      G  ++E+ + LV  GA     +K+ +T +M +   +N +  + +M     +  
Sbjct: 142 LHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSS 201

Query: 539 -NRNAG---GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCE 594
              +     G   LH A      D        G  VN+ D +   PL L+ R     + +
Sbjct: 202 LRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTK 261

Query: 595 LLISNGAVCDIKNAR-------------GETALSLARKNSSMKNDAELVILDEVARMLVL 641
            L+    V  I+                    +  A   S            EV ++L  
Sbjct: 262 ELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQ----------EVLQLLQE 311

Query: 642 GGGHVLKHTKGGKGTP 657
               V++    G    
Sbjct: 312 KLDEVVRSLNTGA-GG 326

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  161 bits (411), Expect = 4e-44
 Identities = 55/361 (15%), Positives = 103/361 (28%), Gaps = 91/361 (25%)

Query: 302 HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLID 361
            +G T LH A   GC      L S G      +   +    PIHLA     + +V +L++
Sbjct: 51  RFGCTALHLACKFGCVDTAKYLASVGEVHS--LWHGQK---PIHLAVMANKTDLVVALVE 105

Query: 362 SG---------------------CDLNTKTESGETALMISAKYKQE--ECVKVLAKAGAD 398
                                     + K   G+TAL        E  E +K+L + GA 
Sbjct: 106 GAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS 165

Query: 399 FGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAA 458
                 + ++                                     PLM   +  +  A
Sbjct: 166 PTAKDKADET-------------------------------------PLMRAMEFRNREA 188

Query: 459 LKALIGREEL----NLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAI 514
           L  ++          LDY +  G S +  A      +V    V  G DV + +      +
Sbjct: 189 LDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPL 248

Query: 515 MLSELNQNCDLFEKVMLEFALEKG-----------------NRNAGGFYALHCAARRGDL 557
            LS            + +  L+K                           +  AA     
Sbjct: 249 YLSVRAAMVL-----LTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQ 303

Query: 558 DAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLA 617
           + ++LL  +   V      G    +   ++    +  + ++  A    ++     + +++
Sbjct: 304 EVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRSRSRARSSAVS 363

Query: 618 R 618
           +
Sbjct: 364 K 364

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  113 bits (284), Expect = 3e-27
 Identities = 46/356 (12%), Positives = 100/356 (28%), Gaps = 93/356 (26%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKA 134
             ++  + +AA  G    V++L+ TG     +   G   T   +A + G ++  + L   
Sbjct: 18  DENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGC--TALHLACKFGCVDTAKYLASV 75

Query: 135 GASQPACEE--ALLEASCHGQARLAELLM--GSDLIRPHVAVHSLVTACCRGFVDVVDTL 190
           G           +  A    +  L   L+    +                    +V    
Sbjct: 76  GEVHSLWHGQKPIHLAVMANKTDLVVALVEGAKE-----RGQMPESLLNECDEREVN--- 127

Query: 191 MKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVS--VVQLLLQAGANTDMKVR 248
               +  +                    +AL   V        ++++L+Q GA+   K +
Sbjct: 128 ---EIGSHVKH-------------CKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDK 171

Query: 249 LGAWSWDTTTGEEFRVGAGLAEPYAIT--WCAVEYFEITGS--ILRMLLQHLSYNSPH-- 302
                                     T    A+E+     +   L +++  +   S    
Sbjct: 172 AD-----------------------ETPLMRAMEF----RNREALDLMMDTVP--SKSSL 202

Query: 303 -------YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTI 355
                   G + LH AIL          +  G D             P++L+ R     +
Sbjct: 203 RLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTV---PLYLSVRAAMVLL 259

Query: 356 VQSLID-------------SGCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
            + L+              +G  +          +  +A   ++E +++L +   +
Sbjct: 260 TKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDE 315

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 96.9 bits (242), Expect = 8e-22
 Identities = 33/160 (20%), Positives = 49/160 (30%), Gaps = 42/160 (26%)

Query: 461 ALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELN 520
           ++    +LN    DD     + VAA KG  +  R L+  G    + N+ G T        
Sbjct: 4   SMTDFPKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCT-------- 55

Query: 521 QNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTP 580
                                     ALH A + G +D  + L S   G       G  P
Sbjct: 56  --------------------------ALHLACKFGCVDTAKYLASV--GEVHSLWHGQKP 87

Query: 581 LMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKN 620
           + LA       +   L+           RG+   SL  + 
Sbjct: 88  IHLAVMANKTDLVVALVEGAKE------RGQMPESLLNEC 121

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 84.9 bits (211), Expect = 9e-18
 Identities = 32/104 (30%), Positives = 44/104 (42%), Gaps = 11/104 (10%)

Query: 530 MLEFALEKGNRNAG---GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAR 586
           M +F   K NR          +H AAR+G  D VR L   G    + +  G T L LA +
Sbjct: 5   MTDF--PKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACK 62

Query: 587 EGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELV 630
            G     + L S G V  + +  G+  + LA     M N  +LV
Sbjct: 63  FGCVDTAKYLASVGEVHSLWH--GQKPIHLA----VMANKTDLV 100

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 76.8 bits (190), Expect = 3e-15
 Identities = 22/197 (11%), Positives = 52/197 (26%), Gaps = 43/197 (21%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLST-----GADVNQKLFRGFATT---IAVREGHLEILE 129
           K+D T L  A    N   +  ++ T        ++    +G   +    A+     ++  
Sbjct: 171 KADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGN--SHLHWAILINWEDVAM 228

Query: 130 ILLKAGASQPACEE----ALLEASCHGQARLAELLM--GSDLIRPHVAVHS--------- 174
             ++ G      +      L  +       L + L+      +      H+         
Sbjct: 229 RFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRV 288

Query: 175 -----LVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQ 229
                +  A      +V+  L +   ++  +              N      V       
Sbjct: 289 VWLDFVPAAADPSKQEVLQLLQEKLDEVVRSL-------------NTGAGGAVKRKKKAA 335

Query: 230 VSVVQLLLQAGANTDMK 246
            +V ++ L   A    +
Sbjct: 336 PAVKRMKLAPSAPVRTR 352

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 66.0 bits (162), Expect = 1e-11
 Identities = 17/142 (11%), Positives = 39/142 (27%), Gaps = 21/142 (14%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPA 140
           + L  A       +  + +  G DVN +         ++VR   + + + LL+       
Sbjct: 213 SHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLI 272

Query: 141 CEE-----------------ALLEASCHGQARLAELLM--GSDLIRPHVAVHS-LVTACC 180
                                +  A+   +  + +LL     +++R         V    
Sbjct: 273 QACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRKK 332

Query: 181 RGFVDVVDTLMKCGVDINATDR 202
           +    V    +     +    R
Sbjct: 333 KAAPAVKRMKLAPSAPVRTRSR 354

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 54.5 bits (132), Expect = 5e-08
 Identities = 8/63 (12%), Positives = 20/63 (31%), Gaps = 1/63 (1%)

Query: 75  EEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLK 133
            +    +  +  AA      +++ L     +V + L  G        ++    +  + L 
Sbjct: 285 PDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLA 344

Query: 134 AGA 136
             A
Sbjct: 345 PSA 347

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  154 bits (392), Expect = 7e-43
 Identities = 49/270 (18%), Positives = 89/270 (32%), Gaps = 46/270 (17%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
            I  A + G     + L+++G D+    +   T L  +A   + + VK     GA     
Sbjct: 12  DIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGA----- 66

Query: 403 SVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKAL 462
                                           + +       +PL +  + G ++ +  L
Sbjct: 67  -------------------------------IVDQLGGDLNSTPLHWATRQGHLSMVVQL 95

Query: 463 IGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQN 522
           +     +    D  G S + +AA  GH  +   L+  G DV +++++G T +M +    +
Sbjct: 96  MKYG-ADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTH 154

Query: 523 CDLFEKVMLEFALEKG-NRNA----GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDG 577
                       L    + N         ALH A   G+   + LL   G  V+  +  G
Sbjct: 155 S----VDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKG 210

Query: 578 YTPLMLAAREGHGPMCELLISNGAVCDIKN 607
            + L LA +  +  M   L          N
Sbjct: 211 ESALDLAKQRKNVWMINHLQEARQAKGYDN 240

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  128 bits (325), Expect = 8e-34
 Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 19/194 (9%)

Query: 469 NLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEK 528
           ++ + DD     ++ A   G  E  RELV AG DV+  +K   T +  + +N   D    
Sbjct: 1   HMTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRID---- 56

Query: 529 VMLEFALEKG-NRNA----GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLML 583
            ++++ + KG   +          LH A R+G L  V  L   G   ++ DG+G + + L
Sbjct: 57  -LVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHL 115

Query: 584 AAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGG 643
           AA+ GH  +   LI+ G   D+ +  G T L  A    + +  +      +  R+L+   
Sbjct: 116 AAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWA----AYRTHSV-----DPTRLLLTFN 166

Query: 644 GHVLKHTKGGKGTP 657
             V    K  K T 
Sbjct: 167 VSVNLGDKYHKNTA 180

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  115 bits (290), Expect = 4e-29
 Identities = 52/295 (17%), Positives = 92/295 (31%), Gaps = 86/295 (29%)

Query: 366 LNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRA 425
           +    +     ++ + +Y   E  + L +AG D                           
Sbjct: 2   MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDV-------------------------- 35

Query: 426 VLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQD-DNGFSAVMVA 484
                     P   N    + L + A    I  +K  I +    +D    D   + +  A
Sbjct: 36  --------RQPDKEN---VTLLHWAAINNRIDLVKYYISKGA-IVDQLGGDLNSTPLHWA 83

Query: 485 ASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGG 544
             +GH+ +  +L+  GAD  L++  G +                                
Sbjct: 84  TRQGHLSMVVQLMKYGADPSLIDGEGCS-------------------------------- 111

Query: 545 FYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMC-ELLISNGAVC 603
              +H AA+ G    V  L ++G  V++ D +G TPLM AA   H      LL++     
Sbjct: 112 --CIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSV 169

Query: 604 DIK-NARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTP 657
           ++       TAL  A    +            V  +L+  G +V      G+ + 
Sbjct: 170 NLGDKYHKNTALHWAVLAGNT----------TVISLLLEAGANVDAQNIKGE-SA 213

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  100 bits (252), Expect = 5e-24
 Identities = 50/270 (18%), Positives = 87/270 (32%), Gaps = 82/270 (30%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADA-QCPIRTQKTEFHPIHLAARLGYSTIVQSLID 361
              TLLH A +      V   +S GA   Q       T   P+H A R G+ ++V  L+ 
Sbjct: 41  ENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNST---PLHWATRQGHLSMVVQLMK 97

Query: 362 SGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVG 421
            G D +     G + + ++A++     V  L   G D  ++  +G               
Sbjct: 98  YGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGM-------------- 143

Query: 422 FQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAG---DIAALKALIGREELNLDYQDD-NG 477
                                  +PLM+ A      D    + L+    ++++  D  + 
Sbjct: 144 -----------------------TPLMWAAYRTHSVDPT--RLLLTF-NVSVNLGDKYHK 177

Query: 478 FSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEK 537
            +A+  A   G+  V   L+ AGA+V   N  G++                         
Sbjct: 178 NTALHWAVLAGNTTVISLLLEAGANVDAQNIKGES------------------------- 212

Query: 538 GNRNAGGFYALHCAARRGDLDAVRLLTSRG 567
                    AL  A +R ++  +  L    
Sbjct: 213 ---------ALDLAKQRKNVWMINHLQEAR 233

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 92.9 bits (232), Expect = 2e-21
 Identities = 50/301 (16%), Positives = 89/301 (29%), Gaps = 77/301 (25%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGA 136
                 +  A   G     ++L+  G DV Q           A     +++++  +  GA
Sbjct: 7   DYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGA 66

Query: 137 SQPACEE-----ALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLM 191
                        L  A+  G                               + +V  LM
Sbjct: 67  IVDQLGGDLNSTPLHWATRQGH------------------------------LSMVVQLM 96

Query: 192 KCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGA 251
           K G D +  D                CS +  A      S+V  L+  G + DM  + G 
Sbjct: 97  KYGADPSLID-------------GEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNG- 142

Query: 252 WSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQH---LSYNSPHYGRTLL 308
               T                 + W A     +     R+LL     ++    ++  T L
Sbjct: 143 ---MT----------------PLMWAAYRTHSV--DPTRLLLTFNVSVNLGDKYHKNTAL 181

Query: 309 HHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNT 368
           H A+L G T  +++LL  GA+        ++    + LA +     ++  L ++      
Sbjct: 182 HWAVLAGNTTVISLLLEAGANVDAQNIKGES---ALDLAKQRKNVWMINHLQEARQAKGY 238

Query: 369 K 369
            
Sbjct: 239 D 239

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 74.0 bits (183), Expect = 6e-15
 Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 303 YGRTLLHHAILCGCTGAVA-VLLSCGADAQCPIRTQKTEFH---PIHLAARLGYSTIVQS 358
            G T L  A     +     +LL+              ++H    +H A   G +T++  
Sbjct: 141 NGMTPLMWAAYRTHSVDPTRLLLTFNVSV-----NLGDKYHKNTALHWAVLAGNTTVISL 195

Query: 359 LIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFG 400
           L+++G +++ +   GE+AL ++ + K    +  L +A    G
Sbjct: 196 LLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKG 237

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  158 bits (401), Expect = 9e-43
 Identities = 66/335 (19%), Positives = 109/335 (32%), Gaps = 53/335 (15%)

Query: 302 HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLID 361
           HY           G         +       P          +H  A  G   I + +  
Sbjct: 59  HYSLYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPI---KLHTEAA-GSYAITEPITR 114

Query: 362 SGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVG 421
              ++        T L   A     E  + L    A   +       A   A        
Sbjct: 115 ESVNIIDP-RHNRTVLHWIASNSSAEKSEDLIVHEAKECI----AAGADVNAMDCDE--- 166

Query: 422 FQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAV 481
                                  +PLM    A     +  L+     +    + +  SA+
Sbjct: 167 ----------------------NTPLMLAVLARRRRLVAYLMKAG-ADPTIYNKSERSAL 203

Query: 482 MVAASKGHVEVFRELV---YAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG 538
             AA+     +   ++       D++ L+++G TA+M+   N+  D       +  +EKG
Sbjct: 204 HQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASA--KLLVEKG 261

Query: 539 ---NRNAG---------GFYALHCAARRGDLDAVRLLTS-RGYGVNVPDGDGYTPLMLAA 585
              + +           G  ALH AA+  ++  V+ L   +G   +  D DG TP+MLAA
Sbjct: 262 AKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAA 321

Query: 586 REGHGPMCELLISNGAVCDIKNARGETALSLARKN 620
           +EG   +   LI  GA  +  +A   TA  LA+ N
Sbjct: 322 QEGRIEVVMYLIQQGASVEAVDATDHTARQLAQAN 356

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  146 bits (370), Expect = 2e-38
 Identities = 60/326 (18%), Positives = 105/326 (32%), Gaps = 73/326 (22%)

Query: 302 HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLI- 360
                 LH     G       +     +    I   +     +H  A    +   + LI 
Sbjct: 92  PESPIKLHTEA-AGSYAITEPITRESVN----IIDPRHNRTVLHWIASNSSAEKSEDLIV 146

Query: 361 -------DSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIA 413
                   +G D+N       T LM++   ++   V  L KAGAD  + + S +S     
Sbjct: 147 HEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERS----- 201

Query: 414 GSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREEL--NLD 471
                                            L   A   D   +  ++   +L  +++
Sbjct: 202 --------------------------------ALHQAAANRDFGMMVYMLNSTKLKGDIE 229

Query: 472 YQDDNGFSAVMVAASKGH---VEVFRELVYAGADVKLL--------NKSGKTAIMLSELN 520
             D NG +A+M+ A       V   + LV  GA V              G+TA+  +   
Sbjct: 230 ELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQV 289

Query: 521 QNCDLFEKVMLEFAL-EKG-NRNAG---GFYALHCAARRGDLDAVRLLTSRGYGVNVPDG 575
            N       ++++ + EKG N++     G   +  AA+ G ++ V  L  +G  V   D 
Sbjct: 290 SNMP-----IVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDA 344

Query: 576 DGYTPLMLAAREGHGPMCELLISNGA 601
             +T   LA    H  + ++      
Sbjct: 345 TDHTARQLAQANNHHNIVDIFDRCRP 370

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  127 bits (321), Expect = 5e-32
 Identities = 49/352 (13%), Positives = 87/352 (24%), Gaps = 110/352 (31%)

Query: 300 SPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSL 359
           S    +  L  A   G        L                 +P       G   +    
Sbjct: 33  SITSSQHSLLEASYDGYIKRQRNELQ------------HYSLYPNPQGYGNGNDFLGDFN 80

Query: 360 IDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWS 419
             +              L   A        + + +   +             I       
Sbjct: 81  HTNLQIPTEPEPESPIKLHTEAAG-SYAITEPITRESVN-------------IIDPRHN- 125

Query: 420 VGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREEL-------NLDY 472
                                    + L ++A        + LI  E         +++ 
Sbjct: 126 ------------------------RTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNA 161

Query: 473 QDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLE 532
            D +  + +M+A       +   L+ AGAD  + NKS ++                    
Sbjct: 162 MDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERS-------------------- 201

Query: 533 FALEKGNRNAGGFYALHCAARRGDLDAVRLLTS---RGYGVNVPDGDGYTPLMLAAREGH 589
                         ALH AA   D   +  + +       +   D +G T LM+ A    
Sbjct: 202 --------------ALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEG 247

Query: 590 ---GPMCELLISNGA--------VCDIKNARGETALSLARKNSSMKNDAELV 630
                  +LL+  GA          D +  +G TAL  A    +  ++  +V
Sbjct: 248 RDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYA----AQVSNMPIV 295

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  120 bits (302), Expect = 1e-29
 Identities = 58/366 (15%), Positives = 109/366 (29%), Gaps = 83/366 (22%)

Query: 72  VEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEIL 131
              E     +        +GN  L     +      +              G   I E +
Sbjct: 53  QRNELQHYSLYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEAAGSYAITEPI 112

Query: 132 LKAGASQPACEE---ALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVD 188
            +   +          L   + +  A  +E L+                      V    
Sbjct: 113 TRESVNIIDPRHNRTVLHWIASNSSAEKSEDLI----------------------VHEAK 150

Query: 189 TLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVR 248
             +  G D+NA D               + + L+ AV++R+  +V  L++AGA+  +  +
Sbjct: 151 ECIAAGADVNAMD-------------CDENTPLMLAVLARRRRLVAYLMKAGADPTIYNK 197

Query: 249 LGAWSWDTTTGEEFRVGAGLAEPYAIT--WCAVEYFEITGS--ILRMLLQHLSY----NS 300
                                     +    A           ++  +L           
Sbjct: 198 SER-----------------------SALHQAAAN----RDFGMMVYMLNSTKLKGDIEE 230

Query: 301 P-HYGRTLLHHAILCGCTGAVAV---LLSCGADAQCPIRTQKTEFH-----PIHLAARLG 351
               G T L           VA    L+  GA        +K          +H AA++ 
Sbjct: 231 LDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVS 290

Query: 352 YSTIVQSLI-DSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSAS 410
              IV+ L+ + G + + + E G+T +M++A+  + E V  L + GA    V  +  +A 
Sbjct: 291 NMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTAR 350

Query: 411 SIAGSN 416
            +A +N
Sbjct: 351 QLAQAN 356

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  106 bits (266), Expect = 6e-25
 Identities = 27/191 (14%), Positives = 43/191 (22%), Gaps = 27/191 (14%)

Query: 461 ALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELN 520
           +  G  +   +                G+  +                     +      
Sbjct: 45  SYDGYIKRQRNELQHYSLYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEAAG 104

Query: 521 QNCDLFEKVMLEFALEKG---NRNAGGFYALHCAARRGDLDAVRLL--------TSRGYG 569
                    + E    +             LH  A     +    L         + G  
Sbjct: 105 S------YAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD 158

Query: 570 VNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAEL 629
           VN  D D  TPLMLA       +   L+  GA   I N    +AL  A  N         
Sbjct: 159 VNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF------ 212

Query: 630 VILDEVARMLV 640
                +   ++
Sbjct: 213 ----GMMVYML 219

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  105 bits (264), Expect = 1e-24
 Identities = 29/208 (13%), Positives = 61/208 (29%), Gaps = 20/208 (9%)

Query: 446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKL 505
           P       G+           +      +      +   A  G   +   +     ++  
Sbjct: 64  PNPQGYGNGNDFLGDFNHTNLQ-IPTEPEPESPIKLHTEA-AGSYAITEPITRESVNIID 121

Query: 506 LNKSGKTAIMLSELNQNCDLFEKVMLEFA---LEKG-NRNAG---GFYALHCAARRGDLD 558
             +  +T +     N + +  E +++  A   +  G + NA        L  A       
Sbjct: 122 -PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRR 180

Query: 559 AVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISN---GAVCDIKNARGETALS 615
            V  L   G    + +    + L  AA      M   ++++       +  +  G TAL 
Sbjct: 181 LVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALM 240

Query: 616 LARKNSSMKNDAELVILDEVARMLVLGG 643
           +     +     + V     A++LV  G
Sbjct: 241 IV----AHNEGRDQV---ASAKLLVEKG 261

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  105 bits (263), Expect = 2e-24
 Identities = 57/338 (16%), Positives = 97/338 (28%), Gaps = 106/338 (31%)

Query: 78  KSDVTALFLAAHSGNVTLV--------KKLLSTGADVNQKLFRGF-ATTIAVREGHLEIL 128
           + + T L   A + +            K+ ++ GADVN           +AV      ++
Sbjct: 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLV 182

Query: 129 EILLKAGASQPACEE----ALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFV 184
             L+KAGA      +    AL +A+ +    +   ++ S  +                  
Sbjct: 183 AYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKL------------------ 224

Query: 185 DVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVS---RQVSVVQLLLQAGA 241
                      DI   D                 +AL+    +    QV+  +LL++ GA
Sbjct: 225 ---------KGDIEELD-------------RNGMTALMIVAHNEGRDQVASAKLLVEKGA 262

Query: 242 NTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSP 301
             D        S                                                
Sbjct: 263 KVDYDGAARKDSEK---------------------------------------------- 276

Query: 302 HYGRTLLHHAILCGCTGAVAVLLS-CGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLI 360
           + GRT LH+A        V  L+   G++        KT   PI LAA+ G   +V  LI
Sbjct: 277 YKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKT---PIMLAAQEGRIEVVMYLI 333

Query: 361 DSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
             G  +     +  TA  ++        V +  +   +
Sbjct: 334 QQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 73.1 bits (180), Expect = 6e-14
 Identities = 34/216 (15%), Positives = 65/216 (30%), Gaps = 56/216 (25%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLS---CGADAQCPIRTQKTEFHPIHLAARLGY---STIV 356
             R+ LH A      G +  +L+      D +   R   T    + + A           
Sbjct: 198 SERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMT---ALMIVAHNEGRDQVASA 254

Query: 357 QSLIDSGCDLNT--------KTESGETALMISAKYKQEECVKVL-AKAGADFGLVSVSGQ 407
           + L++ G  ++         +   G TAL  +A+      VK L  + G++       G+
Sbjct: 255 KLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGK 314

Query: 408 SASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREE 467
                                                +P+M  AQ G I  +  LI +  
Sbjct: 315 -------------------------------------TPIMLAAQEGRIEVVMYLIQQ-G 336

Query: 468 LNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADV 503
            +++  D    +A  +A +  H  +         + 
Sbjct: 337 ASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPER 372

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 62.3 bits (152), Expect = 2e-10
 Identities = 32/197 (16%), Positives = 65/197 (32%), Gaps = 50/197 (25%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLS---TGADVNQKLFRGF-ATTIAVREGHLEILEI--- 130
           KS+ +AL  AA + +  ++  +L+      D+ +    G  A  I       + +     
Sbjct: 197 KSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKL 256

Query: 131 LLKAGA-----SQPACEE-------ALLEASCHGQARLAELL---MGSDLIRPHVAVHS- 174
           L++ GA          +        AL  A+      + + L    GS+           
Sbjct: 257 LVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSN-------KDKQ 309

Query: 175 -------LVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVS 227
                  ++ A   G ++VV  L++ G  + A D               D +A   A  +
Sbjct: 310 DEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVD-------------ATDHTARQLAQAN 356

Query: 228 RQVSVVQLLLQAGANTD 244
              ++V +  +     +
Sbjct: 357 NHHNIVDIFDRCRPERE 373

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 41.5 bits (98), Expect = 8e-04
 Identities = 6/81 (7%), Positives = 14/81 (17%), Gaps = 24/81 (29%)

Query: 565 SRGYGVNVPDGDGYTPLMLA------------------------AREGHGPMCELLISNG 600
            +    +         L+ A                           G+  + +   +N 
Sbjct: 25  EKNRKNHQSITSSQHSLLEASYDGYIKRQRNELQHYSLYPNPQGYGNGNDFLGDFNHTNL 84

Query: 601 AVCDIKNARGETALSLARKNS 621
            +           L      S
Sbjct: 85  QIPTEPEPESPIKLHTEAAGS 105

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  151 bits (383), Expect = 4e-41
 Identities = 39/328 (11%), Positives = 85/328 (25%), Gaps = 83/328 (25%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
           +G +  ++AI       V  LL+ GA     +   +    P+H AA L  + IV+ L+ S
Sbjct: 30  HGHSASYYAIADNNVRLVCTLLNAGALKN--LLENEF---PLHQAATLEDTKIVKILLFS 84

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGF 422
           G D +   + G TAL  +      + VK+  K                            
Sbjct: 85  GLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR------------------------ 120

Query: 423 QRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVM 482
                       +         +         D++ +   +               S + 
Sbjct: 121 ------------LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF--DLAILLSCIH 166

Query: 483 VAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNA 542
           +    GHV++   L+         N                                   
Sbjct: 167 ITIKNGHVDMMILLLDYMTSTNTNNSLLFIP----------------------------- 197

Query: 543 GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV 602
                +  A    D++ ++ L            + Y+  +         + +++I     
Sbjct: 198 ----DIKLAIDNKDIEMLQALFKYD-------INIYSANLENVLLDDAEIAKMIIEKHVE 246

Query: 603 CDIKNARGETALSLARKNSSMKNDAELV 630
               +   +  +    K   + +  + +
Sbjct: 247 YKSDSYTKDLDIVKNNKLDEIISKNKEL 274

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  121 bits (305), Expect = 1e-30
 Identities = 45/300 (15%), Positives = 75/300 (25%), Gaps = 88/300 (29%)

Query: 346 LAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVS 405
                  S  ++S + S  D       G +A   +        V  L  AGA        
Sbjct: 5   SRINTWKSKQLKSFL-SSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGA-------- 55

Query: 406 GQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGR 465
                                             N     PL   A   D   +K L+  
Sbjct: 56  ----------------------------LKNLLEN---EFPLHQAATLEDTKIVKILLFS 84

Query: 466 EELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSG-KTAIMLSELNQNCD 524
             L+    DD G +A+  A   G+++  +  V     +    K+G KT            
Sbjct: 85  -GLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKT------------ 131

Query: 525 LFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLA 584
                                 + + A    D+  V    S             + + + 
Sbjct: 132 ----------------------SFYHAVMLNDVSIVSYFLSEI-PSTFDLAILLSCIHIT 168

Query: 585 AREGHGPMCELLISNGAVCDIKNARGET-ALSLARKNSSMKNDAELVILDEVARMLVLGG 643
            + GH  M  LL+      +  N+      + LA  N  +          E+ + L    
Sbjct: 169 IKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDI----------EMLQALFKYD 218

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  102 bits (256), Expect = 3e-24
 Identities = 48/319 (15%), Positives = 91/319 (28%), Gaps = 83/319 (26%)

Query: 86  LAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPACEE- 143
              ++     +K  LS   D  +    G  A+  A+ + ++ ++  LL AGA +   E  
Sbjct: 5   SRINTWKSKQLKSFLS-SKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLENE 63

Query: 144 -ALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDR 202
             L                       H A              +V  L+  G+D +  D 
Sbjct: 64  FPL-----------------------HQA-------ATLEDTKIVKILLFSGLDDSQFD- 92

Query: 203 LLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEF 262
                       +   +AL  AV S  +  V+L ++         + G   W T      
Sbjct: 93  ------------DKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTG---WKT------ 131

Query: 263 RVGAGLAEPYAITWCAVEYFEITGS--ILRMLLQHLSYN-SPHYGRTLLHHAILCGCTGA 319
                     +  + AV          I+   L  +          + +H  I  G    
Sbjct: 132 ----------SF-YHAVML----NDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDM 176

Query: 320 VAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMI 379
           + +LL                   I LA       ++Q+L     ++        +A + 
Sbjct: 177 MILLLDYMTSTNTNNSLLFIP--DIKLAIDNKDIEMLQALFKYDINIY-------SANLE 227

Query: 380 SAKYKQEECVKVLAKAGAD 398
           +      E  K++ +   +
Sbjct: 228 NVLLDDAEIAKMIIEKHVE 246

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  100 bits (251), Expect = 1e-23
 Identities = 30/203 (14%), Positives = 51/203 (25%), Gaps = 49/203 (24%)

Query: 451 AQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSG 510
                   LK+ +     +    D +G SA   A +  +V +   L+ AGA         
Sbjct: 7   INTWKSKQLKSFL--SSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKN--LLEN 62

Query: 511 KTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGV 570
           +                                    LH AA   D   V++L   G   
Sbjct: 63  EF----------------------------------PLHQAATLEDTKIVKILLFSGLDD 88

Query: 571 NVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARG-ETALSLARKNSSMKNDAEL 629
           +  D  G T L  A   G+    +L +            G +T+   A   + +      
Sbjct: 89  SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDV------ 142

Query: 630 VILDEVARMLVLGGGHVLKHTKG 652
                +    +            
Sbjct: 143 ----SIVSYFLSEIPSTFDLAIL 161

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 98.8 bits (247), Expect = 5e-23
 Identities = 24/215 (11%), Positives = 59/215 (27%), Gaps = 50/215 (23%)

Query: 444 FSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADV 503
            S   +     ++  +  L+       +  +      +  AA+    ++ + L+++G D 
Sbjct: 32  HSASYYAIADNNVRLVCTLLNAGA-LKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDD 88

Query: 504 KLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLL 563
              +  G T                                  AL+ A   G++  V+L 
Sbjct: 89  SQFDDKGNT----------------------------------ALYYAVDSGNMQTVKLF 114

Query: 564 TSRGYGVNVPDGDGY-TPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSS 622
             + + +      G+ T    A       +    +S         A   + + +  KN  
Sbjct: 115 VKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS-TFDLAILLSCIHITIKNGH 173

Query: 623 MKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTP 657
           +          ++  +L+        +       P
Sbjct: 174 V----------DMMILLLDYMTSTNTNNSLLF-IP 197

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 97.2 bits (243), Expect = 2e-22
 Identities = 28/306 (9%), Positives = 67/306 (21%), Gaps = 90/306 (29%)

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
               LH A     T  V +LL  G D         T    ++ A   G    V+  +   
Sbjct: 62  NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNT---ALYYAVDSGNMQTVKLFVKKN 118

Query: 364 CDLNTKTESG-ETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGF 422
             L    ++G +T+   +        V                     +   +       
Sbjct: 119 WRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPS------------TFDLAILL---- 162

Query: 423 QRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAV- 481
                                 S +    + G +  +  L+     + +  +   F    
Sbjct: 163 ----------------------SCIHITIKNGHVDMMILLLDY-MTSTNTNNSLLFIPDI 199

Query: 482 MVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRN 541
            +A     +E+ + L     ++                                      
Sbjct: 200 KLAIDNKDIEMLQALFKYDINI-------------------------------------Y 222

Query: 542 AGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGA 601
           +    A        D +  +++  +              ++   +       E++  N  
Sbjct: 223 S----ANLENVLLDDAEIAKMIIEKHVEYKSDSYTKDLDIVKNNKLD-----EIISKNKE 273

Query: 602 VCDIKN 607
           +  +  
Sbjct: 274 LRLMYV 279

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 85.3 bits (212), Expect = 2e-18
 Identities = 27/181 (14%), Positives = 58/181 (32%), Gaps = 36/181 (19%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKA 134
             +   L  AA   +  +VK LL +G D +Q   +G   T    AV  G+++ +++ +K 
Sbjct: 60  LENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGN--TALYYAVDSGNMQTVKLFVKK 117

Query: 135 GASQPACEE-----ALLEASCHGQARLAELLMGSDLIRPHVAVH--------SLVTACCR 181
                   +     +   A       +    +        +            +      
Sbjct: 118 NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLS------EIPSTFDLAILLSCIHITIKN 171

Query: 182 GFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGA 241
           G VD++  L+      N  +        P +           A+ ++ + ++Q L +   
Sbjct: 172 GHVDMMILLLDYMTSTNTNNS---LLFIPDIK---------LAIDNKDIEMLQALFKYDI 219

Query: 242 N 242
           N
Sbjct: 220 N 220

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 84.9 bits (211), Expect = 3e-18
 Identities = 43/328 (13%), Positives = 80/328 (24%), Gaps = 97/328 (29%)

Query: 194 GVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWS 253
             D    D                 SA   A+    V +V  LL AGA  ++        
Sbjct: 21  SKDTFKAD-------------VHGHSASYYAIADNNVRLVCTLLNAGALKNLL------- 60

Query: 254 WDTTTGEEFRVGAGLAEPYAITWCAVE-YFEITGSILRMLLQH-LSYNSP-HYGRTLLHH 310
            +                  +   A     +I     ++LL   L  +     G T L++
Sbjct: 61  -ENEF--------------PLHQAATLEDTKIV----KILLFSGLDDSQFDDKGNTALYY 101

Query: 311 AILCGCTGAVAVLLSCGADAQCP----IRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDL 366
           A+  G    V + +              +T        + A  L   +IV   +      
Sbjct: 102 AVDSGNMQTVKLFVKKNWRLMFYGKTGWKT------SFYHAVMLNDVSIVSYFLSEIPS- 154

Query: 367 NTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAV 426
                   + + I+ K    + + +L          +                       
Sbjct: 155 TFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIP----------------- 197

Query: 427 LDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAAS 486
                               +       DI  L+AL           D N +SA +    
Sbjct: 198 -------------------DIKLAIDNKDIEMLQALFK--------YDINIYSANLENVL 230

Query: 487 KGHVEVFRELVYAGADVKLLNKSGKTAI 514
               E+ + ++    + K  + +    I
Sbjct: 231 LDDAEIAKMIIEKHVEYKSDSYTKDLDI 258

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 81.0 bits (201), Expect = 5e-17
 Identities = 25/181 (13%), Positives = 55/181 (30%), Gaps = 43/181 (23%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT--IAVREGHLEILEILLKAGASQP 139
           TAL+ A  SGN+  VK  +     +      G+ T+   AV    + I+   L    S  
Sbjct: 97  TALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF 156

Query: 140 ACEE---ALLEASCHGQARLAELLM--GSDLIRPHVAVH---------SLVTACCRGFVD 185
                   +     +G   +  LL+   +         +          +  A     ++
Sbjct: 157 DLAILLSCIHITIKNGHVDMMILLLDYMTS-------TNTNNSLLFIPDIKLAIDNKDIE 209

Query: 186 VVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDM 245
           ++  L K  ++I +                    A +  V+     + +++++       
Sbjct: 210 MLQALFKYDINIYS--------------------ANLENVLLDDAEIAKMIIEKHVEYKS 249

Query: 246 K 246
            
Sbjct: 250 D 250

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 77.2 bits (191), Expect = 1e-15
 Identities = 38/270 (14%), Positives = 72/270 (26%), Gaps = 78/270 (28%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQK-----LFRGFATTIAVREGHLEILEILLKAGA 136
           +A + A    NV LV  LL+ GA  N       L        A      +I++ILL +G 
Sbjct: 33  SASYYAIADNNVRLVCTLLNAGALKNLLENEFPLH------QAATLEDTKIVKILLFSGL 86

Query: 137 SQPACEE----ALLEASCHGQARLAELLM--GSDLIRPHVAVHS---------LVTACCR 181
                ++    AL  A   G  +  +L +            +              A   
Sbjct: 87  DDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR-------LMFYGKTGWKTSFYHAVML 139

Query: 182 GFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGA 241
             V +V   +                        +  S +   + +  V ++ LLL    
Sbjct: 140 NDVSIVSYFLSEIPSTFD--------------LAILLSCIHITIKNGHVDMMILLLDYMT 185

Query: 242 NTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVE-YFEITGSILRMLLQH-LSYN 299
           +T+    L                        I         E+     + L ++ ++  
Sbjct: 186 STNTNNSLL----FIP---------------DIKLAIDNKDIEML----QALFKYDINIY 222

Query: 300 SPHYGRTLLHHAILCGCTGAVAVLLSCGAD 329
           S           +L        +++    +
Sbjct: 223 SA------NLENVLLDDAEIAKMIIEKHVE 246

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 63.7 bits (156), Expect = 3e-11
 Identities = 15/122 (12%), Positives = 35/122 (28%), Gaps = 35/122 (28%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT--IAVREGHLEILEILLKAGASQP 139
           + + +   +G+V ++  LL      N      F     +A+    +E+L+ L K   +  
Sbjct: 163 SCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDIN-- 220

Query: 140 ACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINA 199
               A LE                                     ++   +++  V+  +
Sbjct: 221 -IYSANLENVLLDD------------------------------AEIAKMIIEKHVEYKS 249

Query: 200 TD 201
             
Sbjct: 250 DS 251

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  150 bits (382), Expect = 6e-41
 Identities = 59/370 (15%), Positives = 104/370 (28%), Gaps = 101/370 (27%)

Query: 232 VVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRM 291
               L+  G++                G +    AG  +   I                 
Sbjct: 10  HSSGLVPRGSHMASM-------DGKQGGMDGSKPAGPRDFPGI----------------R 46

Query: 292 LLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLG 351
           LL +          + +H A + G   ++  L+S G           +   P+H A   G
Sbjct: 47  LLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVS---PLHEACLGG 103

Query: 352 YSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASS 411
           + + V+ L+  G  +N  T    T L  +      +CV +L + GA              
Sbjct: 104 HLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGAS------------- 150

Query: 412 IAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLD 471
                          +                 SP+   A+ G +  + +LI     N+D
Sbjct: 151 ---------------VQPESDLA----------SPIHEAARRGHVECVNSLIAY-GGNID 184

Query: 472 YQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVML 531
           ++  +  + + +A         ++L+ +GADV                            
Sbjct: 185 HKISHLGTPLYLACENQQRACVKKLLESGADV---------------------------- 216

Query: 532 EFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGP 591
                  N+  G    LH   R    +   LL   G      + +G  P+ L   E    
Sbjct: 217 -------NQGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPESP-L 268

Query: 592 MCELLISNGA 601
               L   GA
Sbjct: 269 AQLFLEREGA 278

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  132 bits (335), Expect = 1e-34
 Identities = 48/283 (16%), Positives = 100/283 (35%), Gaps = 29/283 (10%)

Query: 379 ISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKS 438
           + + +        L   G+    +            +           + ++ +  +  +
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDF----PGIRLLSNPLMGDA 56

Query: 439 SNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVY 498
            +   +SP+   A  G   +L+ LI +    ++    +  S +  A   GH+   + L+ 
Sbjct: 57  VSD--WSPMHEAAIHGHQLSLRNLISQGW-AVNIITADHVSPLHEACLGGHLSCVKILLK 113

Query: 499 AGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG---NRNAGGFYALHCAARRG 555
            GA V  +     T +  + ++ + D      +   L+ G      +     +H AARRG
Sbjct: 114 HGAQVNGVTADWHTPLFNACVSGSWD-----CVNLLLQHGASVQPESDLASPIHEAARRG 168

Query: 556 DLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDI-KNARGETAL 614
            ++ V  L + G  ++       TPL LA         + L+ +GA  D+ +    ++ L
Sbjct: 169 HVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGA--DVNQGKGQDSPL 226

Query: 615 SLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTP 657
               + +S           E+A +L+  G         GK  P
Sbjct: 227 HAVVRTASE----------ELACLLMDFGADTQAKNAEGK-RP 258

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  112 bits (284), Expect = 6e-28
 Identities = 56/328 (17%), Positives = 95/328 (28%), Gaps = 64/328 (19%)

Query: 86  LAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPACEE-- 143
           + +   +      L+  G+ +     +      +   G  +   I L +           
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDW 60

Query: 144 -ALLEASCHGQARLAELLM--GSDL----IRPHVAVHSLVTACCRGFVDVVDTLMKCGVD 196
             + EA+ HG       L+  G  +          +H    AC  G +  V  L+K G  
Sbjct: 61  SPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHE---ACLGGHLSCVKILLKHGAQ 117

Query: 197 INATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDT 256
           +N                    + L  A VS     V LLLQ GA+   +          
Sbjct: 118 VNGVT-------------ADWHTPLFNACVSGSWDCVNLLLQHGASVQPE---------- 154

Query: 257 TTGEEFRVGAGLAEPYAIT--WCAVEYFEITGS--ILRMLLQH-LSYNSP-HYGRTLLHH 310
           +                 +    A       G    +  L+ +  + +    +  T L+ 
Sbjct: 155 SDLA--------------SPIHEAARR----GHVECVNSLIAYGGNIDHKISHLGTPLYL 196

Query: 311 AILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKT 370
           A        V  LL  GAD    +   K +  P+H   R     +   L+D G D   K 
Sbjct: 197 ACENQQRACVKKLLESGAD----VNQGKGQDSPLHAVVRTASEELACLLMDFGADTQAKN 252

Query: 371 ESGETALMISAKYKQEECVKVLAKAGAD 398
             G+  + +            L + GA 
Sbjct: 253 AEGKRPVELVPPESPLA-QLFLEREGAS 279

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  109 bits (274), Expect = 1e-26
 Identities = 61/392 (15%), Positives = 110/392 (28%), Gaps = 118/392 (30%)

Query: 118 IAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVT 177
           +     H      L+  G+   + +    +    G                         
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMASMDGK--QGGMDGSKPAGP------------------- 39

Query: 178 ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL 237
               G   + +      +  +A                 D S +  A +      ++ L+
Sbjct: 40  RDFPGIRLLSN-----PLMGDAVS---------------DWSPMHEAAIHGHQLSLRNLI 79

Query: 238 QAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAIT--WCAVEYFEITGS--ILRMLL 293
             G   ++                            ++    A       G    +++LL
Sbjct: 80  SQGWAVNIITADH-----------------------VSPLHEACLG----GHLSCVKILL 112

Query: 294 QHLSY-NSP-HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLG 351
           +H +  N       T L +A + G    V +LL  GA     ++ +     PIH AAR G
Sbjct: 113 KHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGAS----VQPESDLASPIHEAARRG 168

Query: 352 YSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASS 411
           +   V SLI  G +++ K     T L ++ + +Q  CVK L ++GAD             
Sbjct: 169 HVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADV------------ 216

Query: 412 IAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLD 471
                                 N  K       SPL  V +         L+     +  
Sbjct: 217 ----------------------NQGKGQ----DSPLHAVVRTASEELACLLMDF-GADTQ 249

Query: 472 YQDDNGFSAVMVAASKGHVEVFRELVYAGADV 503
            ++  G   V +   +  +     L   GA +
Sbjct: 250 AKNAEGKRPVELVPPESPLAQLF-LEREGASL 280

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 85.6 bits (213), Expect = 1e-18
 Identities = 43/185 (23%), Positives = 71/185 (38%), Gaps = 34/185 (18%)

Query: 76  EFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKA 134
           +  SD + +  AA  G+   ++ L+S G  VN            A   GHL  ++ILLK 
Sbjct: 55  DAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKH 114

Query: 135 GASQPACEE----ALLEASCHGQARLAELLM--GSDLIRPHVAVHS-------LVTACCR 181
           GA            L  A   G      LL+  G+        V         +  A  R
Sbjct: 115 GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGAS-------VQPESDLASPIHEAARR 167

Query: 182 GFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGA 241
           G V+ V++L+  G +I+                +   + L  A  ++Q + V+ LL++GA
Sbjct: 168 GHVECVNSLIAYGGNIDHKI-------------SHLGTPLYLACENQQRACVKKLLESGA 214

Query: 242 NTDMK 246
           + +  
Sbjct: 215 DVNQG 219

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 79.1 bits (196), Expect = 2e-16
 Identities = 34/175 (19%), Positives = 51/175 (29%), Gaps = 32/175 (18%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPAC 141
           T LF A  SG+   V  LL  GA V  +         A R GH+E +  L+  G +    
Sbjct: 127 TPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHK 186

Query: 142 EE----ALLEASCHGQARLAELL--------MGSDLIRPHVAVHSLVTACCRGFVDVVDT 189
                  L  A  + Q    + L         G     P      L         ++   
Sbjct: 187 ISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQDSP------LHAVVRTASEELACL 240

Query: 190 LMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTD 244
           LM  G D  A +                   +        ++ +  L + GA+  
Sbjct: 241 LMDFGADTQAKN-------------AEGKRPVELVPPESPLAQL-FLEREGASLP 281

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 50.2 bits (121), Expect = 8e-07
 Identities = 15/61 (24%), Positives = 21/61 (34%), Gaps = 2/61 (3%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGA 136
           K   + L     + +  L   L+  GAD   K   G     +   E  L     L + GA
Sbjct: 220 KGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPESPLAQ-LFLEREGA 278

Query: 137 S 137
           S
Sbjct: 279 S 279

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  144 bits (365), Expect = 3e-39
 Identities = 55/286 (19%), Positives = 95/286 (33%), Gaps = 79/286 (27%)

Query: 343 PIHLAARLGYSTIVQSLID----SGCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
           P+H+A   G    V  L++     G +L+      +T L ++        V++L  AGA 
Sbjct: 12  PLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS 71

Query: 399 FGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAA 458
                            +  +                                +      
Sbjct: 72  P-----------MALDRHGQT--------------------------AAHLACEHRSPTC 94

Query: 459 LKALIGR---EELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLN-KSGKTAI 514
           L+AL+       L+L+ ++ +G +A+ VA +    E  + L+  GAD+  ++ KSG++  
Sbjct: 95  LRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSP- 153

Query: 515 MLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPD 574
                                            L  A     L  V+LL   G  VN   
Sbjct: 154 ---------------------------------LIHAVENNSLSMVQLLLQHGANVNAQM 180

Query: 575 GDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKN 620
             G + L  A+  G  P+   L+ +GA   +KN   +T L +AR  
Sbjct: 181 YSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSR 226

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  141 bits (357), Expect = 5e-38
 Identities = 56/304 (18%), Positives = 103/304 (33%), Gaps = 76/304 (25%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLS----CGADAQCPIRTQKTEFHPIHLAARLGYSTIVQS 358
            G T LH A++ G   AV  L++     G +       ++T   P+HLA      ++V+ 
Sbjct: 8   DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQT---PLHLAVITTLPSVVRL 64

Query: 359 LIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWW 418
           L+ +G         G+TA  ++ +++   C++ L  + A   L                 
Sbjct: 65  LVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTL----------------- 107

Query: 419 SVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQD-DNG 477
                          ++   +     + L           ++ L+ R   ++D  D  +G
Sbjct: 108 ---------------DLEARNYDG-LTALHVAVNTECQETVQLLLER-GADIDAVDIKSG 150

Query: 478 FSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEK 537
            S ++ A     + + + L+  GA+V     SG +                         
Sbjct: 151 RSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSS------------------------- 185

Query: 538 GNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLI 597
                    ALH A+ RG L  VR L   G   ++ +    TPLM+A       +     
Sbjct: 186 ---------ALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKA 236

Query: 598 SNGA 601
           +  A
Sbjct: 237 TRPA 240

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  108 bits (273), Expect = 8e-27
 Identities = 49/276 (17%), Positives = 80/276 (28%), Gaps = 85/276 (30%)

Query: 366 LNTKTESGETALMISAKYKQEECVKVL----AKAGADFGLVSVSGQSASSIAGSNWWSVG 421
                E G+T L I+        V  L     + G +             I  +      
Sbjct: 2   ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGREL-----------DIYNNLRQ--- 47

Query: 422 FQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAV 481
                                  +PL         + ++ L+     +    D +G +A 
Sbjct: 48  -----------------------TPLHLAVITTLPSVVRLLVTA-GASPMALDRHGQTAA 83

Query: 482 MVAASKGHVEVFRELVYAGA----DVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEK 537
            +A         R L+ + A    D++  N  G T                         
Sbjct: 84  HLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLT------------------------- 118

Query: 538 GNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDG-DGYTPLMLAAREGHGPMCELL 596
                    ALH A      + V+LL  RG  ++  D   G +PL+ A       M +LL
Sbjct: 119 ---------ALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLL 169

Query: 597 ISNGAVCDIKNARGETALSLARKNSSMKNDAELVIL 632
           + +GA  + +   G +AL  A    S +    LV  
Sbjct: 170 LQHGANVNAQMYSGSSALHSA----SGRGLLPLVRT 201

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  100 bits (252), Expect = 5e-24
 Identities = 36/197 (18%), Positives = 60/197 (30%), Gaps = 54/197 (27%)

Query: 470 LDYQDDNGFSAVMVAASKGHVEVFRELV----YAGADVKLLNKSGKTAIMLSELNQNCDL 525
               D++G + + +A  +G++     LV      G ++ + N   +T             
Sbjct: 2   ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQT------------- 48

Query: 526 FEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAA 585
                                 LH A        VRLL + G      D  G T   LA 
Sbjct: 49  ---------------------PLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLAC 87

Query: 586 REGHGPMCELLISNGAVC----DIKNARGETALSLARKNSSMKNDAELVILDEVARMLVL 641
                     L+ + A      + +N  G TAL +A                E  ++L+ 
Sbjct: 88  EHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQ----------ETVQLLLE 137

Query: 642 GGGHV-LKHTKGGKGTP 657
            G  +     K G+ +P
Sbjct: 138 RGADIDAVDIKSGR-SP 153

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 93.7 bits (234), Expect = 1e-21
 Identities = 58/253 (22%), Positives = 96/253 (37%), Gaps = 56/253 (22%)

Query: 178 ACCRGFVDVV----DTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVV 233
           A  +G +  V    +   + G +++  +             N+  + L  AV++   SVV
Sbjct: 16  AVVQGNLPAVHRLVNLFQQGGRELDIYN-------------NLRQTPLHLAVITTLPSVV 62

Query: 234 QLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAIT--WCAVEYFEITGS--IL 289
           +LL+ AGA+     R G                        T    A E+     S   L
Sbjct: 63  RLLVTAGASPMALDRHGQ-----------------------TAAHLACEH----RSPTCL 95

Query: 290 RMLLQHLSYNSP------HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHP 343
           R LL   +  +       + G T LH A+   C   V +LL  GAD        K+   P
Sbjct: 96  RALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADID--AVDIKSGRSP 153

Query: 344 IHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVS 403
           +  A      ++VQ L+  G ++N +  SG +AL  ++       V+ L ++GAD  L +
Sbjct: 154 LIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKN 213

Query: 404 VSGQSASSIAGSN 416
               +   +A S 
Sbjct: 214 CHNDTPLMVARSR 226

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 86.7 bits (216), Expect = 3e-19
 Identities = 52/287 (18%), Positives = 96/287 (33%), Gaps = 68/287 (23%)

Query: 118 IAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVT 177
           IAV +G+L  +  L+          +     +   Q  L            H+AV +   
Sbjct: 15  IAVVQGNLPAVHRLVNLFQQGGRELDI---YNNLRQTPL------------HLAVIT--- 56

Query: 178 ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL 237
                   VV  L+  G    A D                 +A   A   R  + ++ LL
Sbjct: 57  ----TLPSVVRLLVTAGASPMALD-------------RHGQTAAHLACEHRSPTCLRALL 99

Query: 238 QAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAIT--WCAVEYFEITGS--ILRMLL 293
            + A   + +       +    +              T    AV           +++LL
Sbjct: 100 DSAAPGTLDL-------EARNYDGL------------TALHVAVNT----ECQETVQLLL 136

Query: 294 QH---LSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARL 350
           +    +       GR+ L HA+       V +LL  GA+    + +  +    +H A+  
Sbjct: 137 ERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSS---ALHSASGR 193

Query: 351 GYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGA 397
           G   +V++L+ SG D + K    +T LM++   +  + ++  A   A
Sbjct: 194 GLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 80.6 bits (200), Expect = 4e-17
 Identities = 39/191 (20%), Positives = 69/191 (36%), Gaps = 44/191 (23%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKA 134
               T L LA  +   ++V+ L++ GA        G   T   +A        L  LL +
Sbjct: 44  NLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQ--TAAHLACEHRSPTCLRALLDS 101

Query: 135 GASQPACEE--------ALLEASCHGQARLAELLM--GSDLIRPHVAVHS---------L 175
            A      E        AL  A         +LL+  G+D       + +         L
Sbjct: 102 AAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGAD-------IDAVDIKSGRSPL 154

Query: 176 VTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQL 235
           + A     + +V  L++ G ++NA                   SAL +A     + +V+ 
Sbjct: 155 IHAVENNSLSMVQLLLQHGANVNAQM-------------YSGSSALHSASGRGLLPLVRT 201

Query: 236 LLQAGANTDMK 246
           L+++GA++ +K
Sbjct: 202 LVRSGADSSLK 212

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 76.0 bits (188), Expect = 1e-15
 Identities = 54/279 (19%), Positives = 89/279 (31%), Gaps = 81/279 (29%)

Query: 82  TALFLAAHSGNVTLVKKLLST----GADVNQKLFRGFATT---IAVREGHLEILEILLKA 134
           T L +A   GN+  V +L++     G +++         T   +AV      ++ +L+ A
Sbjct: 11  TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQ--TPLHLAVITTLPSVVRLLVTA 68

Query: 135 GASQPACEE----ALLEASCHGQARLAELLMGSDLIRPHVAVHS-------------LVT 177
           GAS  A +     A   A  H        L+         A  +             L  
Sbjct: 69  GASPMALDRHGQTAAHLACEHRSPTCLRALLD------SAAPGTLDLEARNYDGLTALHV 122

Query: 178 ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL 237
           A      + V  L++ G DI+A D                 S L+ AV +  +S+VQLLL
Sbjct: 123 AVNTECQETVQLLLERGADIDAVD------------IKSGRSPLIHAVENNSLSMVQLLL 170

Query: 238 QAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITW----CAVEYFEITGS--ILRM 291
           Q GAN + ++  G                               A       G   ++R 
Sbjct: 171 QHGANVNAQMYSG-------------------------SSALHSASGR----GLLPLVRT 201

Query: 292 LLQH-LSYNSP-HYGRTLLHHAILCGCTGAVAVLLSCGA 328
           L++     +    +  T L  A        +    +  A
Sbjct: 202 LVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 71.3 bits (176), Expect = 6e-14
 Identities = 32/163 (19%), Positives = 62/163 (38%), Gaps = 41/163 (25%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT--IAVREGHLEILEILLKAGASQP 139
           TAL +A ++     V+ LL  GAD++    +   +    AV    L ++++LL+ GA+  
Sbjct: 118 TALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN-- 175

Query: 140 ACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINA 199
                +      G + L            H A         RG + +V TL++ G D + 
Sbjct: 176 -----VNAQMYSGSSAL------------HSASG-------RGLLPLVRTLVRSGADSSL 211

Query: 200 TDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGAN 242
            +               + + L+ A   R + +++      A+
Sbjct: 212 KN-------------CHNDTPLMVARSRRVIDILRGKATRPAS 241

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  143 bits (363), Expect = 8e-39
 Identities = 63/343 (18%), Positives = 107/343 (31%), Gaps = 105/343 (30%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
            G T L  A   G                             +         ++   I  
Sbjct: 9   DGFTPLMIASCSG-----------------------GGLETGNSEEEEDAPAVISDFIYQ 45

Query: 363 GCDL-NTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVG 421
           G  L N    +GETAL ++A+Y + +  K L +A AD                       
Sbjct: 46  GASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD----------------------- 82

Query: 422 FQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAV 481
                             +    +PL     A      + LI     +LD +  +G + +
Sbjct: 83  --------------ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPL 128

Query: 482 MVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRN 541
           ++AA      +  +L+ + ADV  ++  GK+A                            
Sbjct: 129 ILAARLAVEGMLEDLINSHADVNAVDDLGKSA---------------------------- 160

Query: 542 AGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGA 601
                 LH AA   ++DA  +L   G   ++ +    TPL LAAREG     ++L+ + A
Sbjct: 161 ------LHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA 214

Query: 602 VCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGG 644
             DI +        +A++              ++ R+L L   
Sbjct: 215 NRDITDHMDRLPRDIAQERMHH----------DIVRLLDLEHH 247

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  111 bits (280), Expect = 1e-27
 Identities = 55/307 (17%), Positives = 89/307 (28%), Gaps = 96/307 (31%)

Query: 365 DLNTKTESGETALMISAKYKQ-------------EECVKVLAKAGADFGLVSVSGQSASS 411
           D+N +   G T LMI++                    +      GA              
Sbjct: 2   DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGA-------------- 47

Query: 412 IAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLD 471
                                 ++   ++    + L   A+     A K L+     + +
Sbjct: 48  ----------------------SLHNQTDRTGETALHLAARYSRSDAAKRLLEA-SADAN 84

Query: 472 YQDDNGFSAVMVAASKGHVEVFRELVYAGA-DVKLLNKSGKTAIMLSELNQNCDLFEKVM 530
            QD+ G + +  A S     VF+ L+   A D+      G T                  
Sbjct: 85  IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTT------------------ 126

Query: 531 LEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHG 590
                            L  AAR      +  L +    VN  D  G + L  AA   + 
Sbjct: 127 ----------------PLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNV 170

Query: 591 PMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHT 650
               +L+ NGA  D++N R ET L LA +  S           E A++L+    +     
Sbjct: 171 DAAVVLLKNGANKDMQNNREETPLFLAAREGSY----------ETAKVLLDHFANRDITD 220

Query: 651 KGGKGTP 657
              +  P
Sbjct: 221 HMDR-LP 226

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  108 bits (273), Expect = 1e-26
 Identities = 51/267 (19%), Positives = 82/267 (30%), Gaps = 76/267 (28%)

Query: 302 HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLID 361
             G T LH A     + A   LL   ADA       +T   P+H A       + Q LI 
Sbjct: 55  RTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRT---PLHAAVSADAQGVFQILIR 111

Query: 362 SG-CDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSV 420
           +   DL+ +   G T L+++A+   E  ++ L  + AD   V   G+             
Sbjct: 112 NRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGK------------- 158

Query: 421 GFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSA 480
                                   S L + A   ++ A   L+     N D Q++   + 
Sbjct: 159 ------------------------SALHWAAAVNNVDAAVVLLKN-GANKDMQNNREETP 193

Query: 481 VMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR 540
           + +AA +G  E  + L+   A+  + +   +                             
Sbjct: 194 LFLAAREGSYETAKVLLDHFANRDITDHMDRL---------------------------- 225

Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRG 567
                     A  R   D VRLL    
Sbjct: 226 ------PRDIAQERMHHDIVRLLDLEH 246

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 94.1 bits (235), Expect = 1e-21
 Identities = 41/205 (20%), Positives = 69/205 (33%), Gaps = 60/205 (29%)

Query: 468 LNLDYQDDNGFSAVMVAASKG-------------HVEVFRELVYAGADVK-LLNKSGKTA 513
           ++++ +  +GF+ +M+A+  G                V  + +Y GA +    +++G+TA
Sbjct: 1   MDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETA 60

Query: 514 IMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVP 573
                                             LH AAR    DA + L       N+ 
Sbjct: 61  ----------------------------------LHLAARYSRSDAAKRLLEASADANIQ 86

Query: 574 DGDGYTPLMLAAREGHGPMCELLISNGAV-CDIKNARGETALSLARKNSSMKNDAELVIL 632
           D  G TPL  A       + ++LI N A   D +   G T L LA + +           
Sbjct: 87  DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVE--------- 137

Query: 633 DEVARMLVLGGGHVLKHTKGGKGTP 657
             +   L+     V      GK + 
Sbjct: 138 -GMLEDLINSHADVNAVDDLGK-SA 160

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 90.2 bits (225), Expect = 2e-20
 Identities = 45/203 (22%), Positives = 71/203 (34%), Gaps = 46/203 (22%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGA---DAQCPIRTQKTEFHPIHLAARLGYSTIVQSL 359
            GRT LH A+     G   +L+   A   DA+       T   P+ LAARL    +++ L
Sbjct: 89  MGRTPLHAAVSADAQGVFQILIRNRATDLDARM--HDGTT---PLILAARLAVEGMLEDL 143

Query: 360 IDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWS 419
           I+S  D+N   + G++AL  +A     +   VL K GA+  + +   +            
Sbjct: 144 INSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREE------------ 191

Query: 420 VGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFS 479
                                    +PL   A+ G     K L+     N D  D     
Sbjct: 192 -------------------------TPLFLAAREGSYETAKVLLDH-FANRDITDHMDRL 225

Query: 480 AVMVAASKGHVEVFRELVYAGAD 502
              +A  + H ++ R L      
Sbjct: 226 PRDIAQERMHHDIVRLLDLEHHH 248

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 82.9 bits (206), Expect = 8e-18
 Identities = 41/246 (16%), Positives = 80/246 (32%), Gaps = 61/246 (24%)

Query: 169 HVAVH------SLVTACCRGFVDVVDTLMKCGVDI-NATDRLLLQSLKPSLHTNVDCSAL 221
            +A        +  +        V+   +  G  + N TD                 +AL
Sbjct: 15  MIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTD-------------RTGETAL 61

Query: 222 VAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITW----C 277
             A    +    + LL+A A+ +++  +G                               
Sbjct: 62  HLAARYSRSDAAKRLLEASADANIQDNMG-------------------------RTPLHA 96

Query: 278 AVEYFEITGS--ILRMLLQHLSYN---SPHYGRTLLHHAILCGCTGAVAVLLSCGADAQC 332
           AV       +  + ++L+++ + +     H G T L  A      G +  L++  AD   
Sbjct: 97  AVSA----DAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA 152

Query: 333 PIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVL 392
                K+    +H AA +        L+ +G + + +    ET L ++A+    E  KVL
Sbjct: 153 VDDLGKS---ALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVL 209

Query: 393 AKAGAD 398
               A+
Sbjct: 210 LDHFAN 215

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 76.0 bits (188), Expect = 2e-15
 Identities = 41/183 (22%), Positives = 66/183 (36%), Gaps = 32/183 (17%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKA 134
           ++  TAL LAA        K+LL   AD N +   G   T    AV      + +IL++ 
Sbjct: 55  RTGETALHLAARYSRSDAAKRLLEASADANIQDNMGR--TPLHAAVSADAQGVFQILIRN 112

Query: 135 GASQP-ACEE----ALLEASCHGQARLAELLM--GSDL----IRPHVAVHSLVTACCRGF 183
            A+   A        L+ A+      + E L+   +D+         A+H    A     
Sbjct: 113 RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALH---WAAAVNN 169

Query: 184 VDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANT 243
           VD    L+K G + +  +             N + + L  A         ++LL   AN 
Sbjct: 170 VDAAVVLLKNGANKDMQN-------------NREETPLFLAAREGSYETAKVLLDHFANR 216

Query: 244 DMK 246
           D+ 
Sbjct: 217 DIT 219

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 67.1 bits (165), Expect = 2e-12
 Identities = 45/313 (14%), Positives = 87/313 (27%), Gaps = 97/313 (30%)

Query: 82  TALFLAAHSGNVT-------------LVKKLLSTGADV-NQKLFRGFATT---IAVREGH 124
           T L +A+ SG                ++   +  GA + NQ    G   T   +A R   
Sbjct: 12  TPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGE--TALHLAARYSR 69

Query: 125 LEILEILLKAGASQPACEE----ALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACC 180
            +  + LL+A A     +      L  A       + ++L                    
Sbjct: 70  SDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQIL-------------------- 109

Query: 181 RGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAG 240
                    +     D++A               +   + L+ A       +++ L+ + 
Sbjct: 110 ---------IRNRATDLDARM-------------HDGTTPLILAARLAVEGMLEDLINSH 147

Query: 241 ANTDMKVRLGAWSWDTTTGEEFRVGAGLAEP--YAITWCAVEYFEITGSILRMLLQH-LS 297
           A+ +    LG     +                 +A     V+          +LL++  +
Sbjct: 148 ADVNAVDDLG----KS--------------ALHWAAAVNNVD-------AAVVLLKNGAN 182

Query: 298 YNSP-HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIV 356
            +   +   T L  A   G      VLL   A+        +    P  +A    +  IV
Sbjct: 183 KDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRL---PRDIAQERMHHDIV 239

Query: 357 QSLIDSGCDLNTK 369
           + L       +  
Sbjct: 240 RLLDLEHHHHHHH 252

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  140 bits (355), Expect = 6e-38
 Identities = 60/286 (20%), Positives = 93/286 (32%), Gaps = 72/286 (25%)

Query: 343 PIHLAARLGYSTIVQS-LIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGL 401
           P+H A        VQ  L      L  K + G   L  S  ++  E    L     +   
Sbjct: 5   PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV-- 62

Query: 402 VSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKA 461
                                           N+    + + ++P       G++  +K+
Sbjct: 63  --------------------------------NLDDYPDDSGWTPFHIACSVGNLEVVKS 90

Query: 462 LIGREE-LNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELN 520
           L  R    +L+   + G + + +A  K   EV + L+  GA V++ +K  +         
Sbjct: 91  LYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIP------- 143

Query: 521 QNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGY-GVNVPDGDGYT 579
                                      LH AA  G L  + LL   G   VN  D  G+T
Sbjct: 144 ---------------------------LHRAASVGSLKLIELLCGLGKSAVNWQDKQGWT 176

Query: 580 PLMLAAREGHGPMCELLISN-GAVCDIKNARGETALSLARKNSSMK 624
           PL  A  EGHG    LL+   GA  D+ + +G  A  +A      K
Sbjct: 177 PLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVKK 222

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  108 bits (272), Expect = 8e-27
 Identities = 43/204 (21%), Positives = 67/204 (32%), Gaps = 49/204 (24%)

Query: 446 PLMFVAQAGDIAALKALIGRE-ELNL-DYQDDNGFSAVMVAASKGHVEVFRELV--YAGA 501
           PL +            L+ +   +NL DY DD+G++   +A S G++EV + L       
Sbjct: 39  PLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKP 98

Query: 502 DVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVR 561
           D+  +   G T                                   LH A  +   +  +
Sbjct: 99  DLNKITNQGVTC----------------------------------LHLAVGKKWFEVSQ 124

Query: 562 LLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC-DIKNARGETALSLARKN 620
            L   G  V + D     PL  AA  G   + ELL   G    + ++ +G T L  A   
Sbjct: 125 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 184

Query: 621 SSMKNDAELVILDEVARMLVLGGG 644
                        + A +LV   G
Sbjct: 185 GHG----------DAAVLLVEKYG 198

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  108 bits (272), Expect = 9e-27
 Identities = 48/304 (15%), Positives = 81/304 (26%), Gaps = 86/304 (28%)

Query: 304 GRTLLHHAILCGCTGAVA-VLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
               LH A +      V  +L S  +      +  +    P+H +       I   L+  
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRI---PLHWSVSFQAHEITSFLLSK 58

Query: 363 GCDLN---TKTESGETALMISAKYKQEECVKVL--AKAGADFGLVSVSGQSASSIAGSNW 417
             ++N      +SG T   I+      E VK L       D   ++  G           
Sbjct: 59  MENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGV---------- 108

Query: 418 WSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNG 477
                                      + L            + LI     ++  +D   
Sbjct: 109 ---------------------------TCLHLAVGKKWFEVSQFLIENGA-SVRIKDKFN 140

Query: 478 FSAVMVAASKGHVEVFRELVYAG-ADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALE 536
              +  AAS G +++   L   G + V   +K G T                        
Sbjct: 141 QIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWT------------------------ 176

Query: 537 KGNRNAGGFYALHCAARRGDLDAVRLLTSR-GYGVNVPDGDGYTPLMLAAREGHGPMCEL 595
                      L  A   G  DA  LL  + G   ++ D  G     +A  E    + + 
Sbjct: 177 ----------PLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQ---VKKF 223

Query: 596 LISN 599
            ++N
Sbjct: 224 FLNN 227

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  105 bits (265), Expect = 7e-26
 Identities = 35/164 (21%), Positives = 59/164 (35%), Gaps = 19/164 (11%)

Query: 477 GFSAVMVAASKGHVEVFRE-LVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFAL 535
               +  A  +      +E L    + +   ++ G+  +  S   Q  +     +  F L
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHE-----ITSFLL 56

Query: 536 EKG-NRNAG------GFYALHCAARRGDLDAVRLLTSRGYG--VNVPDGDGYTPLMLAAR 586
            K  N N        G+   H A   G+L+ V+ L  R     +N     G T L LA  
Sbjct: 57  SKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVG 116

Query: 587 EGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELV 630
           +    + + LI NGA   IK+   +  L  A    +     +L+
Sbjct: 117 KKWFEVSQFLIENGASVRIKDKFNQIPLHRA----ASVGSLKLI 156

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 99.1 bits (248), Expect = 1e-23
 Identities = 47/217 (21%), Positives = 80/217 (36%), Gaps = 40/217 (18%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLID- 361
            GR  LH ++        + LLS   +         + + P H+A  +G   +V+SL D 
Sbjct: 35  DGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDR 94

Query: 362 -SGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSV 420
               DLN  T  G T L ++   K  E  + L + GA                       
Sbjct: 95  PLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS---------------------- 132

Query: 421 GFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSA 480
                    +R  +           PL   A  G +  ++ L G  +  +++QD  G++ 
Sbjct: 133 ---------VRIKDKFN------QIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTP 177

Query: 481 VMVAASKGHVEVFRELV-YAGADVKLLNKSGKTAIML 516
           +  A ++GH +    LV   GA+  L++  G  A  +
Sbjct: 178 LFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDV 214

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 78.3 bits (194), Expect = 2e-16
 Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 8/93 (8%)

Query: 544 GFYALHCAARRGDLDAVR-LLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGA- 601
             Y LH A    +   V+ LL S+   +   D DG  PL  +       +   L+S    
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN 61

Query: 602 --VCDIKNARGETALSLARKNSSMKNDAELVIL 632
             + D  +  G T   +A        + E+V  
Sbjct: 62  VNLDDYPDDSGWTPFHIA----CSVGNLEVVKS 90

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 77.1 bits (191), Expect = 4e-16
 Identities = 44/250 (17%), Positives = 76/250 (30%), Gaps = 51/250 (20%)

Query: 178 ACCRGFVD-VVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLL 236
           AC       V + L      +   D                   L  +V  +   +   L
Sbjct: 9   ACMENEFFKVQELLHSKPSLLLQKD-------------QDGRIPLHWSVSFQAHEITSFL 55

Query: 237 LQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAIT--WCAVEYFEITGS--ILRML 292
           L    N ++        W                    T    A       G+  +++ L
Sbjct: 56  LSKMENVNLDDYPDDSGW--------------------TPFHIACSV----GNLEVVKSL 91

Query: 293 LQHLSY---NSP-HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAA 348
                    N   + G T LH A+          L+  GA  +   +  +    P+H AA
Sbjct: 92  YDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQI---PLHRAA 148

Query: 349 RLGYSTIVQSLIDSG-CDLNTKTESGETALMISAKYKQEECVKVL-AKAGADFGLVSVSG 406
            +G   +++ L   G   +N + + G T L  +      +   +L  K GA++ LV   G
Sbjct: 149 SVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKG 208

Query: 407 QSASSIAGSN 416
             A  +A + 
Sbjct: 209 AKAEDVALNE 218

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 76.7 bits (190), Expect = 6e-16
 Identities = 33/193 (17%), Positives = 56/193 (29%), Gaps = 41/193 (21%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLS--CGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLI 360
            G T  H A   G    V  L       D         T    +HLA    +  + Q LI
Sbjct: 71  SGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVT---CLHLAVGKKWFEVSQFLI 127

Query: 361 DSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSV 420
           ++G  +  K +  +  L  +A     + +++L   G                        
Sbjct: 128 ENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGK----------------------- 164

Query: 421 GFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSA 480
                        +     +   ++PL      G   A   L+ +     D  D+ G  A
Sbjct: 165 -------------SAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKA 211

Query: 481 VMVAASKGHVEVF 493
             VA ++   + F
Sbjct: 212 EDVALNEQVKKFF 224

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 74.8 bits (185), Expect = 3e-15
 Identities = 29/181 (16%), Positives = 54/181 (29%), Gaps = 39/181 (21%)

Query: 82  TALFLAAHSGNVTLVKKLL-STGADVNQKLFRGFATT---IAVREGHLEILEILLKAGAS 137
             L  A        V++LL S  + + QK   G        +V     EI   LL    +
Sbjct: 4   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGR--IPLHWSVSFQAHEITSFLLSKMEN 61

Query: 138 QPACEE-------ALLEASCHGQARLAELLMGSDLIRPHV---------AVHSLVTACCR 181
               +            A   G   + + L     ++P +          +H    A  +
Sbjct: 62  VNLDDYPDDSGWTPFHIACSVGNLEVVKSLY-DRPLKPDLNKITNQGVTCLH---LAVGK 117

Query: 182 GFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGA 241
            + +V   L++ G  +   D               +   L  A     + +++LL   G 
Sbjct: 118 KWFEVSQFLIENGASVRIKD-------------KFNQIPLHRAASVGSLKLIELLCGLGK 164

Query: 242 N 242
           +
Sbjct: 165 S 165

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 64.0 bits (157), Expect = 1e-11
 Identities = 36/153 (23%), Positives = 57/153 (37%), Gaps = 28/153 (18%)

Query: 69  EVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLS--TGADVNQKLFRGFATT---IAVREG 123
            V ++     S  T   +A   GN+ +VK L       D+N+   +G   T   +AV + 
Sbjct: 61  NVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGV--TCLHLAVGKK 118

Query: 124 HLEILEILLKAGASQPACEE----ALLEASCHGQARLAELLMGSDLIRPHVAVH------ 173
             E+ + L++ GAS    ++     L  A+  G  +L ELL G                 
Sbjct: 119 WFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCG------LGKSAVNWQDK 172

Query: 174 ----SLVTACCRGFVDVVDTLM-KCGVDINATD 201
                L  A   G  D    L+ K G + +  D
Sbjct: 173 QGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVD 205

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 63.2 bits (155), Expect = 2e-11
 Identities = 32/228 (14%), Positives = 65/228 (28%), Gaps = 59/228 (25%)

Query: 178 ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL 237
           +      ++   L+    ++N  D             +   +    A     + VV+ L 
Sbjct: 43  SVSFQAHEITSFLLSKMENVNLDDY----------PDDSGWTPFHIACSVGNLEVVKSLY 92

Query: 238 Q--AGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAIT--WCAVEY--FEITGSILRM 291
                 + +     G                       +T    AV    FE++    + 
Sbjct: 93  DRPLKPDLNKITNQG-----------------------VTCLHLAVGKKWFEVS----QF 125

Query: 292 LLQH-LSYNSP-HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQ----KTEFHPIH 345
           L+++  S      + +  LH A   G    + +L   G      +  Q     T   P+ 
Sbjct: 126 LIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGK---SAVNWQDKQGWT---PLF 179

Query: 346 LAARLGYSTIVQSLIDS-GCDLNTKTESGETALMISAKYKQEECVKVL 392
            A   G+      L++  G + +     G  A  ++     E+  K  
Sbjct: 180 HALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFF 224

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 60.2 bits (147), Expect = 3e-10
 Identities = 32/187 (17%), Positives = 55/187 (29%), Gaps = 42/187 (22%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRG-FATT---IAVREGHLEILEILL--KAG 135
             L  +       +   LLS   +VN   +      T   IA   G+LE+++ L      
Sbjct: 38  IPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLK 97

Query: 136 ASQPACEE----ALLEASCHGQARLAELLM--GSDLIRPHVAVHS--------LVTACCR 181
                        L  A       +++ L+  G+        V          L  A   
Sbjct: 98  PDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGAS-------VRIKDKFNQIPLHRAASV 150

Query: 182 GFVDVVDTLMKCGV-DINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL-QA 239
           G + +++ L   G   +N  D                 + L  A+         LL+ + 
Sbjct: 151 GSLKLIELLCGLGKSAVNWQD-------------KQGWTPLFHALAEGHGDAAVLLVEKY 197

Query: 240 GANTDMK 246
           GA  D+ 
Sbjct: 198 GAEYDLV 204

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  131 bits (333), Expect = 5e-35
 Identities = 55/267 (20%), Positives = 95/267 (35%), Gaps = 72/267 (26%)

Query: 355 IVQSLIDSGCDL-NTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIA 413
           ++   I  G  L N    +GETAL ++A+Y + +  K L +A AD               
Sbjct: 6   VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD--------------- 50

Query: 414 GSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQ 473
                                     +    +PL     A      + LI     +LD +
Sbjct: 51  ----------------------ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDAR 88

Query: 474 DDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEF 533
             +G + +++AA      +  +L+ + ADV  ++  GK+A                    
Sbjct: 89  MHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSA-------------------- 128

Query: 534 ALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMC 593
                         LH AA   ++DA  +L   G   ++ +    TPL LAAREG     
Sbjct: 129 --------------LHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETA 174

Query: 594 ELLISNGAVCDIKNARGETALSLARKN 620
           ++L+ + A  DI +        +A++ 
Sbjct: 175 KVLLDHFANRDITDHMDRLPRDIAQER 201

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  126 bits (319), Expect = 3e-33
 Identities = 50/290 (17%), Positives = 89/290 (30%), Gaps = 77/290 (26%)

Query: 315 GCTGAVAVLLSCGADAQCPIRTQKTEFH--PIHLAARLGYSTIVQSLIDSGCDLNTKTES 372
                ++  +  GA     +  Q        +HLAAR   S   + L+++  D N +   
Sbjct: 2   DAPAVISDFIYQGAS----LHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNM 57

Query: 373 GETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRS 432
           G T L  +     +   ++L +  A                              D+   
Sbjct: 58  GRTPLHAAVSADAQGVFQILIRNRAT-----------------------------DL--- 85

Query: 433 GNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEV 492
            +          +PL+  A+      L+ LI     +++  DD G SA+  AA+  +V+ 
Sbjct: 86  -DARMHDG---TTPLILAARLAVEGMLEDLINS-HADVNAVDDLGKSALHWAAAVNNVDA 140

Query: 493 FRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAA 552
              L+  GA+  + N   +T                                   L  AA
Sbjct: 141 AVVLLKNGANKDMQNNREET----------------------------------PLFLAA 166

Query: 553 RRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV 602
           R G  +  ++L       ++ D     P  +A    H  +  LL     V
Sbjct: 167 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  105 bits (264), Expect = 9e-26
 Identities = 51/266 (19%), Positives = 82/266 (30%), Gaps = 76/266 (28%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
            G T LH A     + A   LL   ADA       +T   P+H A       + Q LI +
Sbjct: 24  TGETALHLAARYSRSDAAKRLLEASADANIQDNMGRT---PLHAAVSADAQGVFQILIRN 80

Query: 363 G-CDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVG 421
              DL+ +   G T L+++A+   E  ++ L  + AD   V   G+              
Sbjct: 81  RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGK-------------- 126

Query: 422 FQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAV 481
                                  S L + A   ++ A   L+     N D Q++   + +
Sbjct: 127 -----------------------SALHWAAAVNNVDAAVVLLKN-GANKDMQNNREETPL 162

Query: 482 MVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRN 541
            +AA +G  E  + L+   A+  + +   +                              
Sbjct: 163 FLAAREGSYETAKVLLDHFANRDITDHMDRL----------------------------- 193

Query: 542 AGGFYALHCAARRGDLDAVRLLTSRG 567
                    A  R   D VRLL    
Sbjct: 194 -----PRDIAQERMHHDIVRLLDEYN 214

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 94.0 bits (235), Expect = 6e-22
 Identities = 34/160 (21%), Positives = 60/160 (37%), Gaps = 36/160 (22%)

Query: 473 QDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLE 532
            D  G +A+ +AA     +  + L+ A AD  + +  G+T                    
Sbjct: 21  TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRT-------------------- 60

Query: 533 FALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRG-YGVNVPDGDGYTPLMLAAREGHGP 591
                          LH A         ++L       ++    DG TPL+LAAR     
Sbjct: 61  --------------PLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEG 106

Query: 592 MCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVI 631
           M E LI++ A  +  +  G++AL  A   ++  + A +++
Sbjct: 107 MLEDLINSHADVNAVDDLGKSALHWAAAVNN-VDAAVVLL 145

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 83.6 bits (208), Expect = 2e-18
 Identities = 49/284 (17%), Positives = 85/284 (29%), Gaps = 77/284 (27%)

Query: 123 GHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRG 182
               ++   +  GAS         +    G+  L            H+A           
Sbjct: 2   DAPAVISDFIYQGASLHN------QTDRTGETAL------------HLAAR-------YS 36

Query: 183 FVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAG-A 241
             D    L++   D N  D             N+  + L AAV +    V Q+L++    
Sbjct: 37  RSDAAKRLLEASADANIQD-------------NMGRTPLHAAVSADAQGVFQILIRNRAT 83

Query: 242 NTDMKVRLGAWSWDTTTGEEFRVGAGLAEP--YAITWCAVEYFEITGSILRMLLQH---- 295
           + D ++  G     T              P   A              +L  L+      
Sbjct: 84  DLDARMHDG----TT--------------PLILAARLAVEG-------MLEDLINSHADV 118

Query: 296 -LSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYST 354
               +    G++ LH A       A  VLL  GA+       ++T   P+ LAAR G   
Sbjct: 119 NAVDD---LGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREET---PLFLAAREGSYE 172

Query: 355 IVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
             + L+D   + +           I+ +    + V++L +    
Sbjct: 173 TAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 82.8 bits (206), Expect = 4e-18
 Identities = 36/172 (20%), Positives = 54/172 (31%), Gaps = 47/172 (27%)

Query: 488 GHVEVFRELVYAGADVK-LLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFY 546
               V  + +Y GA +    +++G+T                                  
Sbjct: 2   DAPAVISDFIYQGASLHNQTDRTGET---------------------------------- 27

Query: 547 ALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV-CDI 605
           ALH AAR    DA + L       N+ D  G TPL  A       + ++LI N A   D 
Sbjct: 28  ALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDA 87

Query: 606 KNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTP 657
           +   G T L LA + +             +   L+     V      GK + 
Sbjct: 88  RMHDGTTPLILAARLAVE----------GMLEDLINSHADVNAVDDLGK-SA 128

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 82.1 bits (204), Expect = 7e-18
 Identities = 45/205 (21%), Positives = 71/205 (34%), Gaps = 46/205 (22%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGA---DAQCPIRTQKTEFHPIHLAARLGYSTIVQSL 359
            GRT LH A+     G   +L+   A   DA+       T   P+ LAARL    +++ L
Sbjct: 57  MGRTPLHAAVSADAQGVFQILIRNRATDLDARM--HDGTT---PLILAARLAVEGMLEDL 111

Query: 360 IDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWS 419
           I+S  D+N   + G++AL  +A     +   VL K GA+  + +   +            
Sbjct: 112 INSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREE------------ 159

Query: 420 VGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFS 479
                                    +PL   A+ G     K L+     N D  D     
Sbjct: 160 -------------------------TPLFLAAREGSYETAKVLLDH-FANRDITDHMDRL 193

Query: 480 AVMVAASKGHVEVFRELVYAGADVK 504
              +A  + H ++ R L        
Sbjct: 194 PRDIAQERMHHDIVRLLDEYNLVRS 218

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 72.8 bits (180), Expect = 1e-14
 Identities = 41/179 (22%), Positives = 64/179 (35%), Gaps = 32/179 (17%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKAGASQ 138
           TAL LAA        K+LL   AD N +   G   T    AV      + +IL++  A+ 
Sbjct: 27  TALHLAARYSRSDAAKRLLEASADANIQDNMGR--TPLHAAVSADAQGVFQILIRNRATD 84

Query: 139 P-ACEE----ALLEASCHGQARLAELLM--GSDL----IRPHVAVHSLVTACCRGFVDVV 187
             A        L+ A+      + E L+   +D+         A+H    A     VD  
Sbjct: 85  LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALH---WAAAVNNVDAA 141

Query: 188 DTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMK 246
             L+K G + +  +             N + + L  A         ++LL   AN D+ 
Sbjct: 142 VVLLKNGANKDMQN-------------NREETPLFLAAREGSYETAKVLLDHFANRDIT 187

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 64.0 bits (157), Expect = 1e-11
 Identities = 33/179 (18%), Positives = 61/179 (34%), Gaps = 40/179 (22%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGA-DVNQKLFRGFATT---IAVREGHLEILEILLKAGAS 137
           T L  A  +    + + L+   A D++ ++  G  TT   +A R     +LE L+ + A 
Sbjct: 60  TPLHAAVSADAQGVFQILIRNRATDLDARMHDG--TTPLILAARLAVEGMLEDLINSHAD 117

Query: 138 QPACEE----ALLEASCHGQARLAELLM--GSDLIRPHVAVHS--------LVTACCRGF 183
             A ++    AL  A+       A +L+  G++                  L  A   G 
Sbjct: 118 VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN-------KDMQNNREETPLFLAAREGS 170

Query: 184 VDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGAN 242
            +    L+    + + TD             ++D      A       +V+LL +    
Sbjct: 171 YETAKVLLDHFANRDITD-------------HMDRLPRDIAQERMHHDIVRLLDEYNLV 216

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 63.6 bits (156), Expect = 2e-11
 Identities = 44/288 (15%), Positives = 84/288 (29%), Gaps = 78/288 (27%)

Query: 91  GNVTLVKKLLSTGADV-NQKLFRGFATT---IAVREGHLEILEILLKAGASQPACEEALL 146
               ++   +  GA + NQ    G   T   +A R    +  + LL+A A          
Sbjct: 2   DAPAVISDFIYQGASLHNQTDRTGE--TALHLAARYSRSDAAKRLLEASAD-------AN 52

Query: 147 EASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCG-VDINATDRLLL 205
                G+  L            H AV             V   L++    D++A      
Sbjct: 53  IQDNMGRTPL------------HAAVS-------ADAQGVFQILIRNRATDLDARM---- 89

Query: 206 QSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVG 265
                    +   + L+ A       +++ L+ + A+ +    LG     +         
Sbjct: 90  ---------HDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG----KS--------- 127

Query: 266 AGLAEP--YAITWCAVEYFEITGSILRMLLQH-LSYNSP-HYGRTLLHHAILCGCTGAVA 321
                   +A     V+          +LL++  + +   +   T L  A   G      
Sbjct: 128 -----ALHWAAAVNNVD-------AAVVLLKNGANKDMQNNREETPLFLAAREGSYETAK 175

Query: 322 VLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTK 369
           VLL   A+        +    P  +A    +  IV+ L +     + +
Sbjct: 176 VLLDHFANRDITDHMDRL---PRDIAQERMHHDIVRLLDEYNLVRSPQ 220

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  125 bits (318), Expect = 1e-33
 Identities = 45/212 (21%), Positives = 80/212 (37%), Gaps = 45/212 (21%)

Query: 446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKL 505
            +  +A  G++  LK  + + +  ++  D+ GF+ ++ A++ G +E  R L+  GAD  +
Sbjct: 5   SIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHI 64

Query: 506 LNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTS 565
           L K  ++                                  AL  A+  G  D V LL  
Sbjct: 65  LAKERES----------------------------------ALSLASTGGYTDIVGLLLE 90

Query: 566 RGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKN 625
           R   +N+ D +G TPL+ A R  H    E L++ GA    +   G T + LA        
Sbjct: 91  RDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYR-- 148

Query: 626 DAELVILDEVARMLVLGGGHVLKHTKGGKGTP 657
                   +V +++      + +        P
Sbjct: 149 --------KVQQVIENHILKLFQSNLVPA-DP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  103 bits (259), Expect = 1e-25
 Identities = 31/209 (14%), Positives = 73/209 (34%), Gaps = 40/209 (19%)

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
               +H     G    +   L  G +     +  +  F P+  A+  G    V+ L++ G
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNL--VNKPDERGFTPLIWASAFGEIETVRFLLEWG 59

Query: 364 CDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQ 423
            D +   +  E+AL +++     + V +L +   D  +   +G                 
Sbjct: 60  ADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNG----------------- 102

Query: 424 RAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMV 483
                                +PL++  +   +  ++AL+ R   +L  + D+G++ + +
Sbjct: 103 --------------------GTPLLYAVRGNHVKCVEALLARGA-DLTTEADSGYTPMDL 141

Query: 484 AASKGHVEVFRELVYAGADVKLLNKSGKT 512
           A + G+ +V + +      +   N     
Sbjct: 142 AVALGYRKVQQVIENHILKLFQSNLVPAD 170

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 86.7 bits (216), Expect = 6e-20
 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 5/89 (5%)

Query: 543 GGFYALHCAARRGDLDAVRLLTSRG-YGVNVPDGDGYTPLMLAAREGHGPMCELLISNGA 601
           G   ++H  A +G+LD ++    +G   VN PD  G+TPL+ A+  G       L+  GA
Sbjct: 1   GDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGA 60

Query: 602 VCDIKNARGETALSLARKNSSMKNDAELV 630
              I     E+ALSLA    S     ++V
Sbjct: 61  DPHILAKERESALSLA----STGGYTDIV 85

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 79.4 bits (197), Expect = 2e-17
 Identities = 36/181 (19%), Positives = 60/181 (33%), Gaps = 36/181 (19%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGAD-VNQKLFRGF-ATTIAVREGHLEILEILLKAGASQP 139
            ++   A  G +  +K+ L  G + VN+   RGF     A   G +E +  LL+ GA   
Sbjct: 4   LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH 63

Query: 140 ACEE----ALLEASCHGQARLAELLM--GSDLIRPHVAVHS--------LVTACCRGFVD 185
              +    AL  AS  G   +  LL+    D       ++         L+ A     V 
Sbjct: 64  ILAKERESALSLASTGGYTDIVGLLLERDVD-------INIYDWNGGTPLLYAVRGNHVK 116

Query: 186 VVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDM 245
            V+ L+  G D+                 +   + +  AV      V Q++         
Sbjct: 117 CVEALLARGADLTTEA-------------DSGYTPMDLAVALGYRKVQQVIENHILKLFQ 163

Query: 246 K 246
            
Sbjct: 164 S 164

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 78.6 bits (195), Expect = 4e-17
 Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 3/96 (3%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
              + L  A   G T  V +LL    D         T   P+  A R  +   V++L+  
Sbjct: 68  ERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGT---PLLYAVRGNHVKCVEALLAR 124

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
           G DL T+ +SG T + ++      +  +V+      
Sbjct: 125 GADLTTEADSGYTPMDLAVALGYRKVQQVIENHILK 160

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 77.5 bits (192), Expect = 1e-16
 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 3/96 (3%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
            G T L  A   G    V  LL  GAD     + +++    + LA+  GY+ IV  L++ 
Sbjct: 35  RGFTPLIWASAFGEIETVRFLLEWGADPHILAKERES---ALSLASTGGYTDIVGLLLER 91

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
             D+N    +G T L+ + +    +CV+ L   GAD
Sbjct: 92  DVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGAD 127

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 63.6 bits (156), Expect = 6e-12
 Identities = 39/209 (18%), Positives = 68/209 (32%), Gaps = 50/209 (23%)

Query: 174 SLVTACCRGFVDVVDTLMKCGVD-INATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSV 232
           S+     +G +D +   ++ G + +N  D                 + L+ A    ++  
Sbjct: 5   SIHQLAAQGELDQLKEHLRKGDNLVNKPD-------------ERGFTPLIWASAFGEIET 51

Query: 233 VQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAIT--WCAVE--YFEITGSI 288
           V+ LL+ GA+  +              E              +    A    Y +I    
Sbjct: 52  VRFLLEWGADPHIL---------AKERE--------------SALSLASTGGYTDIV--- 85

Query: 289 LRMLLQH-LSYNSP-HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHL 346
             +LL+  +  N     G T L +A+       V  LL+ GAD      +  T   P+ L
Sbjct: 86  -GLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYT---PMDL 141

Query: 347 AARLGYSTIVQSLIDSGCDLNTKTESGET 375
           A  LGY  + Q + +    L         
Sbjct: 142 AVALGYRKVQQVIENHILKLFQSNLVPAD 170

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 62.4 bits (153), Expect = 2e-11
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 9/90 (10%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKA 134
           K   +AL LA+  G   +V  LL    D+N   + G   T    AVR  H++ +E LL  
Sbjct: 67  KERESALSLASTGGYTDIVGLLLERDVDINIYDWNGG--TPLLYAVRGNHVKCVEALLAR 124

Query: 135 GASQPACEE----ALLEASCHGQARLAELL 160
           GA      +     +  A   G  ++ +++
Sbjct: 125 GADLTTEADSGYTPMDLAVALGYRKVQQVI 154

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  126 bits (319), Expect = 3e-33
 Identities = 38/253 (15%), Positives = 79/253 (31%), Gaps = 45/253 (17%)

Query: 366 LNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRA 425
                + G+  +  +    +      L     D   ++    +      S          
Sbjct: 5   PPKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSK--------G 56

Query: 426 VLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAA 485
              +I S  + + +     +PL   A+ G+++ L+  +    + ++  D  G +A+  A 
Sbjct: 57  RTGLIPSNYVAEQAESI-DNPLHEAAKRGNLSWLRECLDNR-VGVNGLDKAGSTALYWAC 114

Query: 486 SKGHVEVFRELVY-AGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGG 544
             GH ++   L      ++   NK G TA                               
Sbjct: 115 HGGHKDIVEMLFTQPNIELNQQNKLGDTA------------------------------- 143

Query: 545 FYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCD 604
              LH AA +G  D V+LL ++G   ++ + +      +A       + +      AV  
Sbjct: 144 ---LHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRT 200

Query: 605 IKNARGETALSLA 617
           + NA        +
Sbjct: 201 LSNAEDYLDDEDS 213

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  119 bits (300), Expect = 1e-30
 Identities = 35/287 (12%), Positives = 70/287 (24%), Gaps = 79/287 (27%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
            G+  +  A+          L     D    I                G + ++ S    
Sbjct: 11  PGQVKVFRALYTFEPRTPDELYIEEGD---IIYITDMSDTNWWKGTSKGRTGLIPSN--- 64

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGF 422
              +  + ES +  L  +AK      ++           +  +G +              
Sbjct: 65  --YVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGST-------------- 108

Query: 423 QRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVM 482
                                   L +    G    ++ L  +  + L+ Q+  G +A+ 
Sbjct: 109 -----------------------ALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALH 145

Query: 483 VAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNA 542
            AA KG+ ++ + L+  GA   L N   K A                             
Sbjct: 146 AAAWKGYADIVQLLLAKGARTDLRNIEKKLA----------------------------- 176

Query: 543 GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGH 589
                   A        ++          + + + Y     +  E H
Sbjct: 177 -----FDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDSDLEHH 218

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 83.8 bits (208), Expect = 2e-18
 Identities = 35/274 (12%), Positives = 66/274 (24%), Gaps = 72/274 (26%)

Query: 220 ALVAAVVSRQVSVVQLLLQAGANTDMKVRLG--AWSWDTTTGEEFRVGAGLAEPYAITWC 277
            +  A+ + +      L     +      +    W   T+ G    +      P      
Sbjct: 15  KVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLI------PSNYVAE 68

Query: 278 AVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQ 337
             E                           LH A   G    +   L          +  
Sbjct: 69  QAES----------------------IDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAG 106

Query: 338 KTEFHPIHLAARLGYSTIVQSLID-SGCDLNTKTESGETALMISAKYKQEECVKVLAKAG 396
            T    ++ A   G+  IV+ L      +LN + + G+TAL  +A     + V++L   G
Sbjct: 107 ST---ALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKG 163

Query: 397 ADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDI 456
           A   L ++  +                                             A   
Sbjct: 164 ARTDLRNIEKK-------------------------------------LAFDMATNAACA 186

Query: 457 AALKALIGREELNLDYQDDNGFSAVMVAASKGHV 490
           + LK   G  +      +   +     +  + H 
Sbjct: 187 SLLKKKQGT-DAVRTLSNAEDYLDDEDSDLEHHH 219

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 70.4 bits (173), Expect = 8e-14
 Identities = 32/177 (18%), Positives = 59/177 (33%), Gaps = 33/177 (18%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFAT-TIAVREGHLEILEILLKAGASQPA 140
             +F A ++       +L     D+                +G   ++     A  ++ +
Sbjct: 14  VKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAE-S 72

Query: 141 CEEALLEASCHGQARLAELLM--GSDLIRPHVAVHS--------LVTACCRGFVDVVDTL 190
            +  L EA+  G        +            V+         L  AC  G  D+V+ L
Sbjct: 73  IDNPLHEAAKRGNLSWLRECLDNRVG-------VNGLDKAGSTALYWACHGGHKDIVEML 125

Query: 191 M-KCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMK 246
             +  +++N  +              +  +AL AA       +VQLLL  GA TD++
Sbjct: 126 FTQPNIELNQQN-------------KLGDTALHAAAWKGYADIVQLLLAKGARTDLR 169

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 67.3 bits (165), Expect = 1e-12
 Identities = 32/230 (13%), Positives = 55/230 (23%), Gaps = 52/230 (22%)

Query: 175 LVTACCRGFVDVVDTLMKCGVDINATDR---------------LLLQSLKPSLHTNVDCS 219
           +  A         D L     DI                     L+ S   +       +
Sbjct: 16  VFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVAEQAESIDN 75

Query: 220 ALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAIT--WC 277
            L  A     +S ++  L      +   + G+                       T  + 
Sbjct: 76  PLHEAAKRGNLSWLRECLDNRVGVNGLDKAGS-----------------------TALYW 112

Query: 278 AVEYFEITGS--ILRMLLQHLSYN---SPHYGRTLLHHAILCGCTGAVAVLLSCGADAQC 332
           A       G   I+ ML    +         G T LH A   G    V +LL+ GA    
Sbjct: 113 ACHG----GHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDL 168

Query: 333 PIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAK 382
               +K       +A     +++++    +                 S  
Sbjct: 169 RNIEKKL---AFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDSDL 215

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 64.6 bits (158), Expect = 7e-12
 Identities = 31/173 (17%), Positives = 54/173 (31%), Gaps = 45/173 (26%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILL-K 133
           +S    L  AA  GN++ +++ L     VN     G   T    A   GH +I+E+L  +
Sbjct: 71  ESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGS--TALYWACHGGHKDIVEMLFTQ 128

Query: 134 AGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKC 193
                      L + +  G   L            H        A  +G+ D+V  L+  
Sbjct: 129 PNIE-------LNQQNKLGDTAL------------HA-------AAWKGYADIVQLLLAK 162

Query: 194 GVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMK 246
           G   +  +                  A   A  +   S+++      A   + 
Sbjct: 163 GARTDLRN-------------IEKKLAFDMATNAACASLLKKKQGTDAVRTLS 202

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 50.3 bits (121), Expect = 6e-07
 Identities = 5/50 (10%), Positives = 8/50 (16%)

Query: 571 NVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKN 620
             P   G   +  A         + L              +T        
Sbjct: 6   PKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSK 55

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  124 bits (315), Expect = 6e-33
 Identities = 46/262 (17%), Positives = 81/262 (30%), Gaps = 77/262 (29%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
            +  A +     + + L D+   ++     G T L I+      E  K L   GAD  L 
Sbjct: 9   LLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQ 68

Query: 403 SVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKAL 462
           +    S                                     P ++    G    L  +
Sbjct: 69  NSISDS-------------------------------------PYLYAGAQGRTEILAYM 91

Query: 463 IGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAG-ADVKLLNKSGKTAIMLSELNQ 521
           +     +L+  +  G +A++ AA KGH++  + L+  G  D+   N  G TA        
Sbjct: 92  LKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTA-------- 143

Query: 522 NCDLFEKVMLEFALEKGNRNAGGFYALHCAA-----RRGDLDAVRLLTSRGYGVNVPDGD 576
                                     L  A       +   D V+LL   G   ++ D  
Sbjct: 144 --------------------------LIEAVGLREGNQLYQDIVKLLMENGADQSIKDNS 177

Query: 577 GYTPLMLAAREGHGPMCELLIS 598
           G T +  A ++G+  + ++L  
Sbjct: 178 GRTAMDYANQKGYTEISKILAQ 199

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  108 bits (273), Expect = 3e-27
 Identities = 36/202 (17%), Positives = 66/202 (32%), Gaps = 44/202 (21%)

Query: 445 SPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVK 504
           + L    Q       + L       +D  D  G + + +A     +E+ + L+  GAD+ 
Sbjct: 8   ALLEAANQRDTKKVKEILQDTT-YQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADIN 66

Query: 505 LLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLT 564
           L N    +                                      A  +G  + +  + 
Sbjct: 67  LQNSISDS----------------------------------PYLYAGAQGRTEILAYML 92

Query: 565 SRG-YGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDI--KNARGETALSLARKNS 621
                 +N  +  G   L+ AA +GH    +LL+ +G   DI  +N  G TAL  A    
Sbjct: 93  KHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGRE-DIDFQNDFGYTALIEAVGLR 151

Query: 622 SMKNDAELVILDEVARMLVLGG 643
                 +     ++ ++L+  G
Sbjct: 152 EGNQLYQ-----DIVKLLMENG 168

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  104 bits (263), Expect = 7e-26
 Identities = 49/259 (18%), Positives = 83/259 (32%), Gaps = 79/259 (30%)

Query: 369 KTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLD 428
           KT      L  + +   ++  ++L         V   G                      
Sbjct: 2   KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGN--------------------- 40

Query: 429 IIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKG 488
                           +PL       DI   KALI R   +++ Q+    S  + A ++G
Sbjct: 41  ----------------TPLNIAVHNNDIEIAKALIDRGA-DINLQNSISDSPYLYAGAQG 83

Query: 489 HVEVFRELVYAGA-DVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYA 547
             E+   ++     D+   N+ G                                    A
Sbjct: 84  RTEILAYMLKHATPDLNKHNRYGGN----------------------------------A 109

Query: 548 LHCAARRGDLDAVRLLTSRGYG-VNVPDGDGYTPLMLAA-----REGHGPMCELLISNGA 601
           L  AA +G +D V+LL   G   ++  +  GYT L+ A       + +  + +LL+ NGA
Sbjct: 110 LIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGA 169

Query: 602 VCDIKNARGETALSLARKN 620
              IK+  G TA+  A + 
Sbjct: 170 DQSIKDNSGRTAMDYANQK 188

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 99.1 bits (248), Expect = 7e-24
 Identities = 41/269 (15%), Positives = 87/269 (32%), Gaps = 78/269 (28%)

Query: 302 HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLID 361
           +    LL  A          +L               T   P+++A       I ++LID
Sbjct: 4   YEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNT---PLNIAVHNNDIEIAKALID 60

Query: 362 SGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVG 421
            G D+N +    ++  + +    + E +  + K                           
Sbjct: 61  RGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATP----------------------- 97

Query: 422 FQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAV 481
                 D+          N    + L+  A+ G I  +K L+     ++D+Q+D G++A+
Sbjct: 98  ------DL-------NKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTAL 144

Query: 482 MVAA-----SKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALE 536
           + A      ++ + ++ + L+  GAD  + + SG+T                        
Sbjct: 145 IEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRT------------------------ 180

Query: 537 KGNRNAGGFYALHCAARRGDLDAVRLLTS 565
                     A+  A ++G  +  ++L  
Sbjct: 181 ----------AMDYANQKGYTEISKILAQ 199

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 96.4 bits (241), Expect = 6e-23
 Identities = 24/160 (15%), Positives = 48/160 (30%), Gaps = 41/160 (25%)

Query: 473 QDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLE 532
           +     + +  A  +   +V   L      V  ++  G T                    
Sbjct: 2   KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTP------------------- 42

Query: 533 FALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPM 592
                          L+ A    D++  + L  RG  +N+ +    +P + A  +G   +
Sbjct: 43  ---------------LNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEI 87

Query: 593 CELLISNGAVCDI--KNARGETALSLARKNSSMKNDAELV 630
              ++ +    D+   N  G  AL  A    + K   + V
Sbjct: 88  LAYMLKHATP-DLNKHNRYGGNALIPA----AEKGHIDNV 122

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 88.7 bits (221), Expect = 3e-20
 Identities = 19/105 (18%), Positives = 36/105 (34%), Gaps = 10/105 (9%)

Query: 540 RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISN 599
           +       L  A +R       +L    Y V+  D +G TPL +A       + + LI  
Sbjct: 2   KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDR 61

Query: 600 GAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGG 644
           GA  +++N+  ++    A                E+   ++    
Sbjct: 62  GADINLQNSISDSPYLYAGAQGRT----------EILAYMLKHAT 96

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 77.9 bits (193), Expect = 2e-16
 Identities = 47/229 (20%), Positives = 77/229 (33%), Gaps = 52/229 (22%)

Query: 175 LVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQ 234
           L  A  R    V + L      ++  D                 + L  AV +  + + +
Sbjct: 10  LEAANQRDTKKVKEILQDTTYQVDEVD-------------TEGNTPLNIAVHNNDIEIAK 56

Query: 235 LLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGS--ILRML 292
            L+  GA+ +++  +     D+              PY     A       G   IL  +
Sbjct: 57  ALIDRGADINLQNSIS----DS--------------PY---LYAGAQ----GRTEILAYM 91

Query: 293 LQHLSYN---SPHYGRTLLHHAILCGCTGAVAVLLSCG-ADAQCPIRTQKTEFHPIHLAA 348
           L+H + +      YG   L  A   G    V +LL  G  D         T    +  A 
Sbjct: 92  LKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYT---ALIEAV 148

Query: 349 RLGYST-----IVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVL 392
            L         IV+ L+++G D + K  SG TA+  + +    E  K+L
Sbjct: 149 GLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKIL 197

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 75.6 bits (187), Expect = 8e-16
 Identities = 38/186 (20%), Positives = 68/186 (36%), Gaps = 40/186 (21%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPA 140
             L  A       + + L  T   V++    G     IAV    +EI + L+  GA    
Sbjct: 8   ALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINL 67

Query: 141 CEE----ALLEASCHGQARLAELLMGSDLIRPHVAVH----------SLVTACCRGFVDV 186
                    L A   G+  +   ++       H              +L+ A  +G +D 
Sbjct: 68  QNSISDSPYLYAGAQGRTEILAYMLK------HATPDLNKHNRYGGNALIPAAEKGHIDN 121

Query: 187 VDTLMKCG-VDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVS-----VVQLLLQAG 240
           V  L++ G  DI+  +             +   +AL+ AV  R+ +     +V+LL++ G
Sbjct: 122 VKLLLEDGREDIDFQN-------------DFGYTALIEAVGLREGNQLYQDIVKLLMENG 168

Query: 241 ANTDMK 246
           A+  +K
Sbjct: 169 ADQSIK 174

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 65.5 bits (161), Expect = 2e-12
 Identities = 31/140 (22%), Positives = 52/140 (37%), Gaps = 23/140 (16%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPA 140
           T L +A H+ ++ + K L+  GAD+N +          A  +G  EIL  +LK       
Sbjct: 41  TPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDL- 99

Query: 141 CEE-------ALLEASCHGQARLAELLMGSDLIRP-----------HVAVHSLVTACCRG 182
             +       AL+ A+  G     +LL+                    A    +    + 
Sbjct: 100 -NKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEA--VGLREGNQL 156

Query: 183 FVDVVDTLMKCGVDINATDR 202
           + D+V  LM+ G D +  D 
Sbjct: 157 YQDIVKLLMENGADQSIKDN 176

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 46.7 bits (112), Expect = 5e-06
 Identities = 40/256 (15%), Positives = 76/256 (29%), Gaps = 82/256 (32%)

Query: 118 IAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVT 177
            A +    ++ EIL             + E    G   L            ++AVH    
Sbjct: 12  AANQRDTKKVKEILQDTTYQ-------VDEVDTEGNTPL------------NIAVH---- 48

Query: 178 ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL 237
                 +++   L+  G DIN  +             ++  S  + A    +  ++  +L
Sbjct: 49  ---NNDIEIAKALIDRGADINLQN-------------SISDSPYLYAGAQGRTEILAYML 92

Query: 238 QAGA-NTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAIT--WCAVEYFEITGS--ILRML 292
           +    + +   R G                             A E     G    +++L
Sbjct: 93  KHATPDLNKHNRYGG-----------------------NALIPAAEK----GHIDNVKLL 125

Query: 293 LQHLSYNSPH---YGRTLLHHAILC-----GCTGAVAVLLSCGADAQCPIRTQKTEFHPI 344
           L+    +      +G T L  A+            V +L+  GAD      + +T    +
Sbjct: 126 LEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRT---AM 182

Query: 345 HLAARLGYSTIVQSLI 360
             A + GY+ I + L 
Sbjct: 183 DYANQKGYTEISKILA 198

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 44.4 bits (106), Expect = 4e-05
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 6/58 (10%)

Query: 82  TALFLAAHSGNVT-----LVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLK 133
           TAL  A            +VK L+  GAD + K   G  A   A ++G+ EI +IL +
Sbjct: 142 TALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQ 199

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  124 bits (313), Expect = 2e-32
 Identities = 45/259 (17%), Positives = 89/259 (34%), Gaps = 41/259 (15%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
             +LA       + + ++          +   TAL  +      E V+ L + G      
Sbjct: 10  ICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV--- 66

Query: 403 SVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKAL 462
                   +      WS                          PL   A AG    +KAL
Sbjct: 67  --------NDKDDAGWS--------------------------PLHIAASAGXDEIVKAL 92

Query: 463 IGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQN 522
           + +   +++  + NG + +  AASK   E+   L+  GA+    +    TA+  +    N
Sbjct: 93  LVKGA-HVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGN 151

Query: 523 CDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLM 582
             +   ++L +      ++  G   LH A     ++  + L ++G  + + + +  TPL 
Sbjct: 152 LKMVH-ILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQ 210

Query: 583 LAAREGHGPMCELLISNGA 601
           +A   G   +    ++ G 
Sbjct: 211 VAK--GGLGLILKRLAEGE 227

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  105 bits (264), Expect = 7e-26
 Identities = 50/252 (19%), Positives = 95/252 (37%), Gaps = 39/252 (15%)

Query: 369 KTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLD 428
              S      ++   K +E  + +    +                               
Sbjct: 3   GCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDS---------------------- 40

Query: 429 IIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKG 488
                           + L +   AG    ++ L+    + ++ +DD G+S + +AAS G
Sbjct: 41  ---------------RTALHWACSAGHTEIVEFLLQLG-VPVNDKDDAGWSPLHIAASAG 84

Query: 489 HVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYAL 548
             E+ + L+  GA V  +N++G T +  +      ++   ++LE       ++     A+
Sbjct: 85  XDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAV-MLLEGGANPDAKDHYDATAM 143

Query: 549 HCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNA 608
           H AA +G+L  V +L       N+ D +G TPL LA  E      + L++ GA   I+N 
Sbjct: 144 HRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENK 203

Query: 609 RGETALSLARKN 620
             +T L +A+  
Sbjct: 204 EEKTPLQVAKGG 215

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 93.0 bits (231), Expect = 2e-21
 Identities = 41/201 (20%), Positives = 76/201 (37%), Gaps = 10/201 (4%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
             RT LH A   G T  V  LL  G           +   P+H+AA  G   IV++L+  
Sbjct: 39  DSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWS---PLHIAASAGXDEIVKALLVK 95

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGF 422
           G  +N   ++G T L  +A   + E   +L + GA+         +A   A +     G 
Sbjct: 96  GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAK----GN 151

Query: 423 QRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVM 482
            + V  ++         +    +PL        +   K L+ +   ++  ++    + + 
Sbjct: 152 LKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGA-SIYIENKEEKTPLQ 210

Query: 483 VAASKGHVEVFRELVYAGADV 503
           VA   G + +  + +  G + 
Sbjct: 211 VAK--GGLGLILKRLAEGEEA 229

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 91.1 bits (226), Expect = 9e-21
 Identities = 38/188 (20%), Positives = 72/188 (38%), Gaps = 19/188 (10%)

Query: 475 DNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFA 534
            +      +A S    E+   ++   +     ++  +TA+  +    + +     ++EF 
Sbjct: 5   VSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTE-----IVEFL 59

Query: 535 LEKG-NRNAG---GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHG 590
           L+ G   N     G+  LH AA  G  + V+ L  +G  VN  + +G TPL  AA +   
Sbjct: 60  LQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRH 119

Query: 591 PMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHT 650
            +  +L+  GA  D K+    TA+  A    ++          ++  +L+          
Sbjct: 120 EIAVMLLEGGANPDAKDHYDATAMHRAAAKGNL----------KMVHILLFYKASTNIQD 169

Query: 651 KGGKGTPH 658
             G    H
Sbjct: 170 TEGNTPLH 177

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 77.2 bits (190), Expect = 5e-16
 Identities = 44/265 (16%), Positives = 87/265 (32%), Gaps = 56/265 (21%)

Query: 79  SDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKAG 135
           S++    LA       L +++L+  +   +        T    A   GH EI+E LL+ G
Sbjct: 6   SNIMICNLAYSGKLDELKERILADKSLATRTDQDSR--TALHWACSAGHTEIVEFLLQLG 63

Query: 136 ASQPACEE----ALLEASCHGQARLAELLM--GSDL-IRPHVAVHSLVTACCRGFVDVVD 188
                 ++     L  A+  G   + + L+  G+ +          L  A  +   ++  
Sbjct: 64  VPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAV 123

Query: 189 TLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVR 248
            L++ G + +A D             + D +A+  A     + +V +LL   A+T+++  
Sbjct: 124 MLLEGGANPDAKD-------------HYDATAMHRAAAKGNLKMVHILLFYKASTNIQDT 170

Query: 249 LGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGS--ILRMLLQHLS--YNSPHYG 304
            G                            +            + L+   +  Y      
Sbjct: 171 EG-------------------------NTPLHLACDEERVEEAKFLVTQGASIYIENKEE 205

Query: 305 RTLLHHAILCGCTGAVAVLLSCGAD 329
           +T L  A   G  G +   L+ G +
Sbjct: 206 KTPLQVA--KGGLGLILKRLAEGEE 228

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 75.7 bits (186), Expect = 1e-15
 Identities = 49/285 (17%), Positives = 85/285 (29%), Gaps = 73/285 (25%)

Query: 118 IAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVT 177
           +A      E+ E +L   +     ++         +  L            H A      
Sbjct: 13  LAYSGKLDELKERILADKSLATRTDQ-------DSRTAL------------HWA------ 47

Query: 178 ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL 237
            C  G  ++V+ L++ GV +N  D             +   S L  A  +    +V+ LL
Sbjct: 48  -CSAGHTEIVEFLLQLGVPVNDKD-------------DAGWSPLHIAASAGXDEIVKALL 93

Query: 238 QAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGS--ILRMLLQH 295
             GA+ +   + G                            + Y        I  MLL+ 
Sbjct: 94  VKGAHVNAVNQNG-------------------------CTPLHYAASKNRHEIAVMLLEG 128

Query: 296 LSY--NSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYS 353
            +      HY  T +H A   G    V +LL   A          T   P+HLA      
Sbjct: 129 GANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNT---PLHLACDEERV 185

Query: 354 TIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
              + L+  G  +  + +  +T L ++        +      G +
Sbjct: 186 EEAKFLVTQGASIYIENKEEKTPLQVAKGGL--GLILKRLAEGEE 228

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 68.4 bits (167), Expect = 5e-13
 Identities = 39/176 (22%), Positives = 64/176 (36%), Gaps = 23/176 (13%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGA 136
            +  + L +AA +G   +VK LL  GA VN     G      A  +   EI  +LL+ GA
Sbjct: 71  DAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGA 130

Query: 137 SQPACEE----ALLEASCHGQARLAELLM--GSDL-IRPHVAVHSLVTACCRGFVDVVDT 189
           +  A +     A+  A+  G  ++  +L+   +   I+       L  AC    V+    
Sbjct: 131 NPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKF 190

Query: 190 LMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDM 245
           L+  G  I   ++      K  L            V    + ++   L  G    M
Sbjct: 191 LVTQGASIYIENK----EEKTPLQ-----------VAKGGLGLILKRLAEGEEASM 231

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  120 bits (305), Expect = 5e-32
 Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 35/175 (20%)

Query: 446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKL 505
            +  +A  G++  L   I +E   +++ D+ GF+ +M AA+ G + V   L+  GAD +L
Sbjct: 6   SVHQLAAQGEMLYLATRIEQE-NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL 64

Query: 506 LNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTS 565
           L K  ++A                                  L  A  +G  D V++L  
Sbjct: 65  LGKGRESA----------------------------------LSLACSKGYTDIVKMLLD 90

Query: 566 RGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKN 620
            G  VN  D +G TPL+ A    H    ++L+ +GA   I+   G  ++ LA   
Sbjct: 91  CGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVAL 145

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  107 bits (271), Expect = 2e-27
 Identities = 34/230 (14%), Positives = 66/230 (28%), Gaps = 72/230 (31%)

Query: 372 SGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIR 431
           +   ++   A   +   +    +           G                         
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEG------------------------- 36

Query: 432 SGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVE 491
                       F+PLM+ A  G IA ++ L+     +         SA+ +A SKG+ +
Sbjct: 37  ------------FTPLMWAAAHGQIAVVEFLLQNGA-DPQLLGKGRESALSLACSKGYTD 83

Query: 492 VFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCA 551
           + + L+  G DV   + +G T                                   L  A
Sbjct: 84  IVKMLLDCGVDVNEYDWNGGT----------------------------------PLLYA 109

Query: 552 ARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGA 601
                +  V++L   G    +    GY  + LA   G+  + +++ S+  
Sbjct: 110 VHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLL 159

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 99.8 bits (250), Expect = 2e-24
 Identities = 38/234 (16%), Positives = 70/234 (29%), Gaps = 72/234 (30%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
            +H  A  G    + + I+    +N   E G T LM +A + Q   V+ L + GAD  L+
Sbjct: 6   SVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLL 65

Query: 403 SVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKAL 462
               +S                                      L      G    +K L
Sbjct: 66  GKGRES-------------------------------------ALSLACSKGYTDIVKML 88

Query: 463 IGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQN 522
           +    ++++  D NG + ++ A    HV+  + L+ +GAD  +   SG  +         
Sbjct: 89  LDCG-VDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNS--------- 138

Query: 523 CDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGD 576
                                    +  A   G     +++ S    +     +
Sbjct: 139 -------------------------MDLAVALGYRSVQQVIESHLLKLLQNIKE 167

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 94.8 bits (237), Expect = 8e-23
 Identities = 31/205 (15%), Positives = 65/205 (31%), Gaps = 41/205 (20%)

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
               +H     G    +A  +              T   P+  AA  G   +V+ L+ +G
Sbjct: 3   NSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFT---PLMWAAAHGQIAVVEFLLQNG 59

Query: 364 CDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQ 423
            D     +  E+AL ++      + VK+L   G D      +G                 
Sbjct: 60  ADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNG----------------- 102

Query: 424 RAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMV 483
                                +PL++      +  +K L+     +   + D+G++++ +
Sbjct: 103 --------------------GTPLLYAVHGNHVKCVKMLLESGA-DPTIETDSGYNSMDL 141

Query: 484 AASKGHVEVFRELVYAGADVKLLNK 508
           A + G+  V + +      +    K
Sbjct: 142 AVALGYRSVQQVIESHLLKLLQNIK 166

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 84.0 bits (209), Expect = 4e-19
 Identities = 32/180 (17%), Positives = 57/180 (31%), Gaps = 35/180 (19%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPA 140
            ++   A  G +  +   +     +N     GF     A   G + ++E LL+ GA    
Sbjct: 5   LSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL 64

Query: 141 CEE----ALLEASCHGQARLAELLM--GSDLIRPHVAVHS--------LVTACCRGFVDV 186
             +    AL  A   G   + ++L+  G D       V+         L+ A     V  
Sbjct: 65  LGKGRESALSLACSKGYTDIVKMLLDCGVD-------VNEYDWNGGTPLLYAVHGNHVKC 117

Query: 187 VDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMK 246
           V  L++ G D                  +   +++  AV     SV Q++          
Sbjct: 118 VKMLLESGADPTIET-------------DSGYNSMDLAVALGYRSVQQVIESHLLKLLQN 164

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 79.7 bits (198), Expect = 1e-17
 Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 3/96 (3%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
            G T L  A   G    V  LL  GAD Q   + +++    + LA   GY+ IV+ L+D 
Sbjct: 35  EGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRES---ALSLACSKGYTDIVKMLLDC 91

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
           G D+N    +G T L+ +      +CVK+L ++GAD
Sbjct: 92  GVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD 127

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 77.4 bits (192), Expect = 8e-17
 Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 3/96 (3%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
              + L  A   G T  V +LL CG D         T   P+  A    +   V+ L++S
Sbjct: 68  GRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGT---PLLYAVHGNHVKCVKMLLES 124

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
           G D   +T+SG  ++ ++         +V+      
Sbjct: 125 GADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK 160

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 61.6 bits (151), Expect = 2e-11
 Identities = 41/200 (20%), Positives = 71/200 (35%), Gaps = 43/200 (21%)

Query: 174 SLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVV 233
           S+     +G +  + T ++    IN TD                 + L+ A    Q++VV
Sbjct: 6   SVHQLAAQGEMLYLATRIEQENVINHTD-------------EEGFTPLMWAAAHGQIAVV 52

Query: 234 QLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVE-YFEITGSILRML 292
           + LLQ GA+  +  +      ++                A++    + Y +I     +ML
Sbjct: 53  EFLLQNGADPQLLGKGR----ES----------------ALSLACSKGYTDIV----KML 88

Query: 293 LQH-LSYNSP-HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARL 350
           L   +  N     G T L +A+       V +LL  GAD      +       + LA  L
Sbjct: 89  LDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYN---SMDLAVAL 145

Query: 351 GYSTIVQSLIDSGCDLNTKT 370
           GY ++ Q +      L    
Sbjct: 146 GYRSVQQVIESHLLKLLQNI 165

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 61.6 bits (151), Expect = 2e-11
 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 9/90 (10%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKA 134
           K   +AL LA   G   +VK LL  G DVN+  + G   T    AV   H++ +++LL++
Sbjct: 67  KGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGG--TPLLYAVHGNHVKCVKMLLES 124

Query: 135 GASQPACEE----ALLEASCHGQARLAELL 160
           GA      +    ++  A   G   + +++
Sbjct: 125 GADPTIETDSGYNSMDLAVALGYRSVQQVI 154

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 58.9 bits (144), Expect = 3e-10
 Identities = 14/83 (16%), Positives = 23/83 (27%), Gaps = 11/83 (13%)

Query: 575 GDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDE 634
           G     +   A +G        I    V +  +  G T L  A  +  +           
Sbjct: 1   GANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQI----------A 50

Query: 635 VARMLVLGGGHVLKHTKGGKGTP 657
           V   L+  G       KG + + 
Sbjct: 51  VVEFLLQNGADPQLLGKGRE-SA 72

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  120 bits (303), Expect = 2e-31
 Identities = 45/215 (20%), Positives = 72/215 (33%), Gaps = 47/215 (21%)

Query: 446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKL 505
            +    + G+  A++  +   E +L+  DD+GFS +  A  +G   V   L+  GA + +
Sbjct: 8   DIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINV 67

Query: 506 LNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTS 565
           +N+   T                                   LH AA  G  D V+ L  
Sbjct: 68  MNRGDDTP----------------------------------LHLAASHGHRDIVQKLLQ 93

Query: 566 RGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKN 625
               +N  +  G  PL  A   G   + E L++NGA+  I N  GE  +  A+       
Sbjct: 94  YKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRE-- 151

Query: 626 DAELVILDEVARMLVLGG---GHVLKHTKGGKGTP 657
                    +       G     +       KGT 
Sbjct: 152 --------LLRERAEKMGQNLNRIPYKDTFWKGTT 178

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 90.6 bits (226), Expect = 4e-21
 Identities = 36/248 (14%), Positives = 69/248 (27%), Gaps = 79/248 (31%)

Query: 343 PIHLAARLGYSTIVQSLIDSG-CDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGL 401
            I    R G +  V+  +D+   DLN   + G + L  + +  +   V++L   GA   +
Sbjct: 8   DIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINV 67

Query: 402 VSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKA 461
           ++                                         +PL   A  G    ++ 
Sbjct: 68  MNRGDD-------------------------------------TPLHLAASHGHRDIVQK 90

Query: 462 LIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQ 521
           L+   + +++  +++G   +  A   G  +V  +LV  GA V + NK G+          
Sbjct: 91  LLQY-KADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEM--------- 140

Query: 522 NCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPL 581
                                     +  A               G  +N        P 
Sbjct: 141 -------------------------PVDKAKAPLRELLRERAEKMGQNLN------RIPY 169

Query: 582 MLAAREGH 589
                +G 
Sbjct: 170 KDTFWKGT 177

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 82.1 bits (204), Expect = 3e-18
 Identities = 35/202 (17%), Positives = 59/202 (29%), Gaps = 44/202 (21%)

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQ-KTEFHPIHLAARLGYSTIVQSLIDS 362
               +      G   AV + L         +       F P+H A R G S +V+ LI  
Sbjct: 5   FMDDIFTQCREGNAVAVRLWLDNTE---NDLNQGDDHGFSPLHWACREGRSAVVEMLIMR 61

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSI-AGSNWWSVG 421
           G  +N      +T L ++A +   + V+ L +  AD             I A +      
Sbjct: 62  GARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKAD-------------INAVNEH---- 104

Query: 422 FQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAV 481
                      GN           PL +    G     + L+      +   +  G   V
Sbjct: 105 -----------GN----------VPLHYACFWGQDQVAEDLVANGA-LVSICNKYGEMPV 142

Query: 482 MVAASKGHVEVFRELVYAGADV 503
             A +     +       G ++
Sbjct: 143 DKAKAPLRELLRERAEKMGQNL 164

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 79.4 bits (197), Expect = 3e-17
 Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 3/96 (3%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
           +G + LH A   G +  V +L+  GA      R   T   P+HLAA  G+  IVQ L+  
Sbjct: 38  HGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDT---PLHLAASHGHRDIVQKLLQY 94

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
             D+N   E G   L  +  + Q++  + L   GA 
Sbjct: 95  KADINAVNEHGNVPLHYACFWGQDQVAEDLVANGAL 130

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 76.3 bits (189), Expect = 3e-16
 Identities = 35/175 (20%), Positives = 61/175 (34%), Gaps = 32/175 (18%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGA-DVNQKLFRGFATT---IAVREGHLEILEILLKAGAS 137
             +F     GN   V+  L     D+NQ    GF  +    A REG   ++E+L+  GA 
Sbjct: 7   DDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGF--SPLHWACREGRSAVVEMLIMRGAR 64

Query: 138 QPACEE----ALLEASCHGQARLAELLM--GSDL----IRPHVAVHSLVTACCRGFVDVV 187
                      L  A+ HG   + + L+   +D+       +V +H    AC  G   V 
Sbjct: 65  INVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHY---ACFWGQDQVA 121

Query: 188 DTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGAN 242
           + L+  G  ++  +                   +  A    +  + +   + G N
Sbjct: 122 EDLVANGALVSICN-------------KYGEMPVDKAKAPLRELLRERAEKMGQN 163

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 76.3 bits (189), Expect = 3e-16
 Identities = 21/96 (21%), Positives = 34/96 (35%), Gaps = 3/96 (3%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
              T LH A   G    V  LL   AD             P+H A   G   + + L+ +
Sbjct: 71  GDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNV---PLHYACFWGQDQVAEDLVAN 127

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
           G  ++   + GE  +  +    +E   +   K G +
Sbjct: 128 GALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQN 163

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 66.7 bits (164), Expect = 6e-13
 Identities = 31/136 (22%), Positives = 50/136 (36%), Gaps = 24/136 (17%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKAGASQ 138
           + L  A   G   +V+ L+  GA +N         T   +A   GH +I++ LL+  A  
Sbjct: 41  SPLHWACREGRSAVVEMLIMRGARINVMNRGDD--TPLHLAASHGHRDIVQKLLQYKADI 98

Query: 139 PACEE----ALLEASCHGQARLAELLM--GSDLIRPHV-------AVHSLVTACCRGFVD 185
            A  E     L  A   GQ ++AE L+  G+      +        V     A       
Sbjct: 99  NAVNEHGNVPLHYACFWGQDQVAEDLVANGAL---VSICNKYGEMPVDK---AKAPLREL 152

Query: 186 VVDTLMKCGVDINATD 201
           + +   K G ++N   
Sbjct: 153 LRERAEKMGQNLNRIP 168

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 60.1 bits (147), Expect = 1e-10
 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 9/90 (10%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKA 134
           + D T L LAA  G+  +V+KLL   AD+N     G        A   G  ++ E L+  
Sbjct: 70  RGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGN--VPLHYACFWGQDQVAEDLVAN 127

Query: 135 GASQPACEE----ALLEASCHGQARLAELL 160
           GA    C +     + +A    +  L E  
Sbjct: 128 GALVSICNKYGEMPVDKAKAPLRELLRERA 157

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 52.4 bits (127), Expect = 4e-08
 Identities = 37/202 (18%), Positives = 63/202 (31%), Gaps = 50/202 (24%)

Query: 175 LVTACCRGFVDVVDTLMKCG-VDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVV 233
           + T C  G    V   +     D+N  D             +   S L  A    + +VV
Sbjct: 9   IFTQCREGNAVAVRLWLDNTENDLNQGD-------------DHGFSPLHWACREGRSAVV 55

Query: 234 QLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAIT--WCAVEYFEITGS--IL 289
           ++L+  GA  ++  R                          T    A  +    G   I+
Sbjct: 56  EMLIMRGARINVMNRGD-----------------------DTPLHLAASH----GHRDIV 88

Query: 290 RMLLQH-LSYNSP-HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLA 347
           + LLQ+    N+   +G   LH+A   G       L++ GA      +  +    P+  A
Sbjct: 89  QKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEM---PVDKA 145

Query: 348 ARLGYSTIVQSLIDSGCDLNTK 369
                  + +     G +LN  
Sbjct: 146 KAPLRELLRERAEKMGQNLNRI 167

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 45.5 bits (109), Expect = 1e-05
 Identities = 25/129 (19%), Positives = 38/129 (29%), Gaps = 38/129 (29%)

Query: 118 IAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVT 177
              REG+   + + L    +         +   HG                   +H    
Sbjct: 11  TQCREGNAVAVRLWLDNTENDLN------QGDDHGF----------------SPLHW--- 45

Query: 178 ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL 237
           AC  G   VV+ L+  G  IN  +               D + L  A       +VQ LL
Sbjct: 46  ACREGRSAVVEMLIMRGARINVMN-------------RGDDTPLHLAASHGHRDIVQKLL 92

Query: 238 QAGANTDMK 246
           Q  A+ +  
Sbjct: 93  QYKADINAV 101

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  121 bits (305), Expect = 4e-31
 Identities = 42/292 (14%), Positives = 83/292 (28%), Gaps = 74/292 (25%)

Query: 303 YGRTLLHHAILCGCTGA----VAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQS 358
            G + LH AI+          +  +    A        Q+T   P+HLA       I ++
Sbjct: 7   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQT---PLHLAVITNQPEIAEA 63

Query: 359 LIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWW 418
           L+ +GCD   +   G T L ++ +      V VL ++              S +  +N+ 
Sbjct: 64  LLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTT-------PHLHSILKATNY- 115

Query: 419 SVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDD-NG 477
                        +G           + L   +  G +  ++ L+     +++ Q+  NG
Sbjct: 116 -------------NG----------HTCLHLASIHGYLGIVELLVSLGA-DVNAQEPCNG 151

Query: 478 FSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEK 537
            +A+ +A    + ++   L+  GADV  +   G +                         
Sbjct: 152 RTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS------------------------- 186

Query: 538 GNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGH 589
                           R      + L            +             
Sbjct: 187 ---------PYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEF 229

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  118 bits (297), Expect = 4e-30
 Identities = 46/275 (16%), Positives = 82/275 (29%), Gaps = 59/275 (21%)

Query: 369 KTESGETALMISAKY----KQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQR 424
            TE G++ L ++  +       E ++ +    A     +   Q+                
Sbjct: 4   LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQT---------------- 47

Query: 425 AVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVA 484
                                PL            +AL+G    + + +D  G + + +A
Sbjct: 48  ---------------------PLHLAVITNQPEIAEALLGAG-CDPELRDFRGNTPLHLA 85

Query: 485 ASKGHVEVFRELVYAGADVKLL------NKSGKTAIMLSELNQNCDLFEKVMLEFALEKG 538
             +G +     L  +     L       N +G T + L+ ++         ++E  +  G
Sbjct: 86  CEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLG-----IVELLVSLG 140

Query: 539 -NRNA----GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMC 593
            + NA     G  ALH A    + D V LL   G  VN     GY+P  L        + 
Sbjct: 141 ADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQ 200

Query: 594 ELLISNGAVCDIKNARGETALSLARKNSSMKNDAE 628
           + L              E   S   ++       E
Sbjct: 201 QQLGQLTLENLQMLPESEDEESYDTESEF-TEFTE 234

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 98.8 bits (247), Expect = 2e-23
 Identities = 36/254 (14%), Positives = 75/254 (29%), Gaps = 48/254 (18%)

Query: 283 EITGSILRMLLQHLSY-NSP-HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTE 340
            +T  ++R +   L++ N   +  +T LH A++         LL  G D +       T 
Sbjct: 22  ALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNT- 80

Query: 341 FHPIHLAARLGYSTIVQSLIDSGCD------LNTKTESGETALMISAKYKQEECVKVLAK 394
             P+HLA   G    V  L  S         L     +G T L +++ +     V++L  
Sbjct: 81  --PLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVS 138

Query: 395 AGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAG 454
            GAD                                    +         + L       
Sbjct: 139 LGAD------------------------------------VNAQEPCNGRTALHLAVDLQ 162

Query: 455 DIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAI 514
           +   +  L+     +++     G+S   +   +    + ++L     +   +    +   
Sbjct: 163 NPDLVSLLLKC-GADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEE 221

Query: 515 MLSELNQNCDLFEK 528
                ++  +  E 
Sbjct: 222 SYDTESEFTEFTED 235

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 98.4 bits (246), Expect = 3e-23
 Identities = 50/262 (19%), Positives = 89/262 (33%), Gaps = 61/262 (23%)

Query: 169 HVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSR 228
           H+A+     A     ++V+  +      +N  +             N+  + L  AV++ 
Sbjct: 13  HLAIIHEEKALT---MEVIRQVKGDLAFLNFQN-------------NLQQTPLHLAVITN 56

Query: 229 QVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEP--YAITWCAVEYFEITG 286
           Q  + + LL AG + +++   G    +T              P   A     +       
Sbjct: 57  QPEIAEALLGAGCDPELRDFRG----NT--------------PLHLACEQGCLA------ 92

Query: 287 SILRMLLQHLSYNSPH--------YGRTLLHHAILCGCTGAVAVLLSCGAD----AQCPI 334
             + +L Q  +    H         G T LH A + G  G V +L+S GAD      C  
Sbjct: 93  -SVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNG 151

Query: 335 RTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAK 394
           RT       +HLA  L    +V  L+  G D+N  T  G +   ++         + L +
Sbjct: 152 RT------ALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQ 205

Query: 395 AGADFGLVSVSGQSASSIAGSN 416
              +   +    +   S    +
Sbjct: 206 LTLENLQMLPESEDEESYDTES 227

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 94.5 bits (236), Expect = 5e-22
 Identities = 30/181 (16%), Positives = 49/181 (27%), Gaps = 54/181 (29%)

Query: 473 QDDNGFSAVMVAASKGHVEVFRELV----YAGADVKLLNKSGKTAIMLSELNQNCDLFEK 528
             ++G S + +A       +  E++       A +   N   +T                
Sbjct: 4   LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTP--------------- 48

Query: 529 VMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREG 588
                              LH A      +    L   G    + D  G TPL LA  +G
Sbjct: 49  -------------------LHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQG 89

Query: 589 HGPMCELLISNGA------VCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLG 642
                 +L  +        +    N  G T L LA  +  +           +  +LV  
Sbjct: 90  CLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYL----------GIVELLVSL 139

Query: 643 G 643
           G
Sbjct: 140 G 140

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 83.8 bits (208), Expect = 3e-18
 Identities = 45/204 (22%), Positives = 66/204 (32%), Gaps = 54/204 (26%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKAGASQ 138
           T L LA  +    + + LL  G D   + FRG   T   +A  +G L  + +L ++  + 
Sbjct: 47  TPLHLAVITNQPEIAEALLGAGCDPELRDFRGN--TPLHLACEQGCLASVGVLTQSCTTP 104

Query: 139 PACEE----------ALLEASCHGQARLAELLM--GSD------------LIRPHVAVHS 174
                           L  AS HG   + ELL+  G+D            L   H+AV  
Sbjct: 105 HLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTAL---HLAVD- 160

Query: 175 LVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQ 234
                     D+V  L+KCG D+N                    S            + Q
Sbjct: 161 ------LQNPDLVSLLLKCGADVNRVT-------------YQGYSPYQLTWGRPSTRIQQ 201

Query: 235 LLLQAGANTDMKVRLG--AWSWDT 256
            L Q        +       S+DT
Sbjct: 202 QLGQLTLENLQMLPESEDEESYDT 225

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 76.4 bits (189), Expect = 1e-15
 Identities = 38/188 (20%), Positives = 67/188 (35%), Gaps = 40/188 (21%)

Query: 82  TALFLAAHSGNVT----LVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKA 134
           + L LA           +++++    A +N +       T   +AV     EI E LL A
Sbjct: 10  SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQ--TPLHLAVITNQPEIAEALLGA 67

Query: 135 GASQPACEE----ALLEASCHGQARLAELLM--GSDLIRPHV----------AVHSLVTA 178
           G      +      L  A   G      +L    +      +           +H    A
Sbjct: 68  GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLH---LA 124

Query: 179 CCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQ 238
              G++ +V+ L+  G D+NA +     + + +LH          AV  +   +V LLL+
Sbjct: 125 SIHGYLGIVELLVSLGADVNAQEP---CNGRTALHL---------AVDLQNPDLVSLLLK 172

Query: 239 AGANTDMK 246
            GA+ +  
Sbjct: 173 CGADVNRV 180

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 42.2 bits (100), Expect = 3e-04
 Identities = 6/49 (12%), Positives = 13/49 (26%), Gaps = 1/49 (2%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILE 129
           +   L     +  + ++L     +  Q L       +        E  E
Sbjct: 186 SPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEFTEFTE 234

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  116 bits (293), Expect = 5e-30
 Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 9/169 (5%)

Query: 456 IAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIM 515
           I   K++    +   +Y+D    + +MVA   G      +LV     ++  +  G TA++
Sbjct: 14  IKDEKSINQNLDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALI 73

Query: 516 LSELNQNCDLFEKVMLEFALEKG-NRNA---GGFYALHCAARRGDLDAVRLLTSRGYGVN 571
            +  N N       + E  L KG N N     G   L  +   G  +    L   G  VN
Sbjct: 74  WAVKN-NR----LGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVN 128

Query: 572 VPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKN 620
             + +G TPL++A++ G   + + L+  GA    ++  G TA + AR  
Sbjct: 129 DRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIF 177

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 97.8 bits (245), Expect = 1e-23
 Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 14/162 (8%)

Query: 446 PLMFVAQAGDIAALKALI--GREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADV 503
           PLM     G   A+  L+        L+ +D  G +A++ A     + +  +L+  G++V
Sbjct: 38  PLMVACMLGMENAIDKLVENF---DKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV 94

Query: 504 KLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG-NRNAG---GFYALHCAARRGDLDA 559
              + SGKT +M S +          M  F LE G N N     G   L  A++ G  + 
Sbjct: 95  NTKDFSGKTPLMWSIIFGY-----SEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEI 149

Query: 560 VRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGA 601
           V+ L   G  ++  D  G T    A   G   + ++      
Sbjct: 150 VKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVRR 191

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 83.6 bits (208), Expect = 1e-18
 Identities = 43/270 (15%), Positives = 80/270 (29%), Gaps = 93/270 (34%)

Query: 302 HYGRTLLHHAILCGCTGAVAVLL----SCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQ 357
             G  +            +  L     S         RT      P+ +A  LG    + 
Sbjct: 6   KNGEIVEKIKDEKSINQNLDFLRNYRDSYN-------RT------PLMVACMLGMENAID 52

Query: 358 SLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNW 417
            L+++   L  K   G TAL+ + K  +    + L   G++      SG+          
Sbjct: 53  KLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGK---------- 102

Query: 418 WSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALI--GREELNLDYQDD 475
                                      +PLM+    G       L+  G    N++ ++ 
Sbjct: 103 ---------------------------TPLMWSIIFGYSEMSYFLLEHG---ANVNDRNL 132

Query: 476 NGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFAL 535
            G + ++VA+  G  E+ ++L+  GAD+   + +G T                       
Sbjct: 133 EGETPLIVASKYGRSEIVKKLLELGADISARDLTGLT----------------------- 169

Query: 536 EKGNRNAGGFYALHCAARRGDLDAVRLLTS 565
                      A   A   G  + +++ T 
Sbjct: 170 -----------AEASARIFGRQEVIKIFTE 188

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 63.2 bits (155), Expect = 1e-11
 Identities = 32/138 (23%), Positives = 53/138 (38%), Gaps = 28/138 (20%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPA 140
           T L +A   G    + KL+     +  K   G  A   AV+   L I E LL  G++   
Sbjct: 37  TPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNT 96

Query: 141 CEE----ALLEASCHGQARLAELLM--GSD-----------LIRPHVAVHSLVTACCRGF 183
            +      L+ +   G + ++  L+  G++           LI           A   G 
Sbjct: 97  KDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIV----------ASKYGR 146

Query: 184 VDVVDTLMKCGVDINATD 201
            ++V  L++ G DI+A D
Sbjct: 147 SEIVKKLLELGADISARD 164

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 48.9 bits (118), Expect = 1e-06
 Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGAS 137
           T L +A+  G   +VKKLL  GAD++ +   G  A   A   G  E+++I  +   +
Sbjct: 136 TPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVRRA 192

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  114 bits (289), Expect = 8e-30
 Identities = 46/153 (30%), Positives = 75/153 (49%), Gaps = 13/153 (8%)

Query: 474 DDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEF 533
            +   + +  AA++G +E    L+    +V   N  G+TA+ + +L          +   
Sbjct: 2   AEPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGN------PEIARR 55

Query: 534 ALEKG-NRNAG---GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGH 589
            L +G N +     GF  +H AAR G LD ++ L      VN+ D +G  PL LAA+EGH
Sbjct: 56  LLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGH 115

Query: 590 GPMCELLISNGAVCDI--KNARGETALSLARKN 620
             + E L+ + A  ++  +N +G+TA  LAR  
Sbjct: 116 LRVVEFLVKHTAS-NVGHRNHKGDTACDLARLY 147

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  100 bits (252), Expect = 8e-25
 Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 12/161 (7%)

Query: 446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKL 505
            L   A  GD+  L +L+    +N++ Q+  G +A+      G+ E+ R L+  GA+  L
Sbjct: 8   ELASAAARGDLEQLTSLLQNN-VNVNAQNGFGRTALQ-VMKLGNPEIARRLLLRGANPDL 65

Query: 506 LNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG-NRNAG---GFYALHCAARRGDLDAVR 561
            +++G   I  +      D      L+  LE   + N     G   LH AA+ G L  V 
Sbjct: 66  KDRTGFAVIHDAARAGFLD-----TLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVE 120

Query: 562 LLTSRG-YGVNVPDGDGYTPLMLAAREGHGPMCELLISNGA 601
            L       V   +  G T   LA   G   +  L+ +NGA
Sbjct: 121 FLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 80.1 bits (199), Expect = 1e-17
 Identities = 31/198 (15%), Positives = 61/198 (30%), Gaps = 41/198 (20%)

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
               L  A   G    +  LL    +        +T    + +    G   I + L+  G
Sbjct: 5   WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRT---ALQVMKL-GNPEIARRLLLRG 60

Query: 364 CDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQ 423
            + + K  +G   +  +A+    + ++ L +  AD  +    G                 
Sbjct: 61  ANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGN---------------- 104

Query: 424 RAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMV 483
                                 PL   A+ G +  ++ L+     N+ +++  G +A  +
Sbjct: 105 ---------------------LPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDL 143

Query: 484 AASKGHVEVFRELVYAGA 501
           A   G  EV   +   GA
Sbjct: 144 ARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 67.4 bits (166), Expect = 3e-13
 Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 4/96 (4%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
            G  ++H A   G    +  LL   AD             P+HLAA+ G+  +V+ L+  
Sbjct: 69  TGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNL---PLHLAAKEGHLRVVEFLVKH 125

Query: 363 G-CDLNTKTESGETALMISAKYKQEECVKVLAKAGA 397
              ++  +   G+TA  ++  Y + E V ++   GA
Sbjct: 126 TASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 66.6 bits (164), Expect = 5e-13
 Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 4/95 (4%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
           +GRT L    L G       LL  GA+     RT       IH AAR G+   +Q+L++ 
Sbjct: 37  FGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFA---VIHDAARAGFLDTLQTLLEF 92

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGA 397
             D+N +   G   L ++AK      V+ L K  A
Sbjct: 93  QADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTA 127

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 62.8 bits (154), Expect = 1e-11
 Identities = 35/175 (20%), Positives = 63/175 (36%), Gaps = 35/175 (20%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPAC 141
             L  AA  G++  +  LL    +VN +   G      ++ G+ EI   LL  GA+    
Sbjct: 7   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 66

Query: 142 EE----ALLEASCHGQARLAELLM--GSDLIRPHVAVHS--------LVTACCRGFVDVV 187
           +      + +A+  G     + L+   +D       V+         L  A   G + VV
Sbjct: 67  DRTGFAVIHDAARAGFLDTLQTLLEFQAD-------VNIEDNEGNLPLHLAAKEGHLRVV 119

Query: 188 DTLMKCG-VDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGA 241
           + L+K    ++   +             +   +A   A +  +  VV L+   GA
Sbjct: 120 EFLVKHTASNVGHRN-------------HKGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 57.8 bits (141), Expect = 6e-10
 Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 11/68 (16%)

Query: 576 DGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEV 635
                L  AA  G       L+ N    + +N  G TAL + +  +            E+
Sbjct: 4   PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNP-----------EI 52

Query: 636 ARMLVLGG 643
           AR L+L G
Sbjct: 53  ARRLLLRG 60

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  117 bits (295), Expect = 8e-30
 Identities = 38/209 (18%), Positives = 71/209 (33%), Gaps = 21/209 (10%)

Query: 446 PLMFVAQAGDIAALKALIGRE-ELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVK 504
            L    +          I     +  +       + ++ ++ +G  ++ + ++Y   D  
Sbjct: 8   SLPPGKRTNLRKTGSERIAHGMRVKFN---PLPLALLLDSSLEGEFDLVQRIIYEVDDPS 64

Query: 505 LLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG-NRNAG---GFYALHCAARRGDLDAV 560
           L N  G TA+  +    + +     +++F ++ G N NA    G+  LHCAA   ++   
Sbjct: 65  LPNDEGITALHNAVCAGHTE-----IVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVC 119

Query: 561 RLLTSRGYGVNV---PDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLA 617
           + L   G  V      D            EG+    + L        I N     AL   
Sbjct: 120 KFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDY 179

Query: 618 RKNSSMKNDAELVILDEVARMLVLGGGHV 646
                 +ND EL +  E   M ++     
Sbjct: 180 ----EPQNDDELPM-KEGDCMTIIHREDE 203

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  110 bits (276), Expect = 3e-27
 Identities = 39/280 (13%), Positives = 69/280 (24%), Gaps = 75/280 (26%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
            +    R          I  G  +          L+ S+   + + V+ +     D    
Sbjct: 8   SLPPGKRTNLRKTGSERIAHGMRVK-FNPLPLALLLDSSLEGEFDLVQRIIYEVDD---- 62

Query: 403 SVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKAL 462
                                            P   N    + L     AG    +K L
Sbjct: 63  ---------------------------------PSLPNDEGITALHNAVCAGHTEIVKFL 89

Query: 463 IGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQN 522
           +    +N++  D +G++ +  AAS  +V+V + LV +GA V  +  S             
Sbjct: 90  VQF-GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQ---------- 138

Query: 523 CDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLM 582
                                           G     + L      + + +      L 
Sbjct: 139 ---------------------TAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALW 177

Query: 583 LAAREGHGPMCELLISNGAVCDI--KNARGETALSLARKN 620
               +      EL +  G    I  +    E     AR N
Sbjct: 178 DYEPQNDD---ELPMKEGDCMTIIHREDEDEIEWWWARLN 214

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  106 bits (266), Expect = 5e-26
 Identities = 44/284 (15%), Positives = 84/284 (29%), Gaps = 64/284 (22%)

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
           G+  L            +  ++ G      ++        +  ++  G   +VQ +I   
Sbjct: 5   GQVSLPPGKRTNLRKTGSERIAHGMR----VKFNPLPLALLLDSSLEGEFDLVQRIIYEV 60

Query: 364 CDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQ 423
            D +   + G TAL  +      E VK L + G +         +A+   G         
Sbjct: 61  DDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVN--------VNAADSDG--------- 103

Query: 424 RAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALI--GREELNLDYQDDNGFSAV 481
                               ++PL   A   ++   K L+  G     + Y D    +  
Sbjct: 104 --------------------WTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADK 143

Query: 482 MVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRN 541
                +G+ +  + L      + ++NK    A+   E   +         E  +++G   
Sbjct: 144 CEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQND--------DELPMKEG--- 192

Query: 542 AGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAA 585
                       R D D +    +R       D +GY P  L  
Sbjct: 193 -----DCMTIIHREDEDEIEWWWARLN-----DKEGYVPRNLLG 226

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  105 bits (264), Expect = 1e-25
 Identities = 30/184 (16%), Positives = 55/184 (29%), Gaps = 45/184 (24%)

Query: 474 DDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEF 533
           +  G  ++         +   E +  G  VK  N                          
Sbjct: 2   EITGQVSLPPGKRTNLRKTGSERIAHGMRVK-FNPLPLA--------------------- 39

Query: 534 ALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMC 593
                         L  ++  G+ D V+ +       ++P+ +G T L  A   GH  + 
Sbjct: 40  -------------LLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIV 86

Query: 594 ELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGG 653
           + L+  G   +  ++ G T L  A   +++          +V + LV  G  V   T   
Sbjct: 87  KFLVQFGVNVNAADSDGWTPLHCAASCNNV----------QVCKFLVESGAAVFAMTYSD 136

Query: 654 KGTP 657
             T 
Sbjct: 137 MQTA 140

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 84.2 bits (209), Expect = 2e-18
 Identities = 34/220 (15%), Positives = 67/220 (30%), Gaps = 43/220 (19%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
               LL  + L G    V  ++    D   P     T    +H A   G++ IV+ L+  
Sbjct: 36  LPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGIT---ALHNAVCAGHTEIVKFLVQF 92

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGF 422
           G ++N     G T L  +A     +  K L ++GA                         
Sbjct: 93  GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAV----------------------- 129

Query: 423 QRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVM 482
                           S++   +      + G     + L G +E  +   +     A+ 
Sbjct: 130 -----------FAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQE-KMGIMNKGVIYALW 177

Query: 483 VAASKGHVEVFRELVYAGADVKLLNK--SGKTAIMLSELN 520
               +   E+    +  G  + ++++    +     + LN
Sbjct: 178 DYEPQNDDEL---PMKEGDCMTIIHREDEDEIEWWWARLN 214

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 71.1 bits (175), Expect = 7e-14
 Identities = 33/230 (14%), Positives = 59/230 (25%), Gaps = 50/230 (21%)

Query: 175 LVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQ 234
           L               +  G+ +                  +  + L+ + +  +  +VQ
Sbjct: 9   LPPGKRTNLRKTGSERIAHGMRVKFNP--------------LPLALLLDSSLEGEFDLVQ 54

Query: 235 LLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAIT--WCAVEY--FEITGSILR 290
            ++    +  +    G                       IT    AV     EI     +
Sbjct: 55  RIIYEVDDPSLPNDEG-----------------------ITALHNAVCAGHTEIV----K 87

Query: 291 MLLQHLSY-NSP-HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAA 348
            L+Q     N+    G T LH A  C        L+  GA       +            
Sbjct: 88  FLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEM 147

Query: 349 RLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
             GY+   Q L      +    +    AL     Y+ +   ++  K G  
Sbjct: 148 EEGYTQCSQFLYGVQEKMGIMNKGVIYALWD---YEPQNDDELPMKEGDC 194

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 70.0 bits (172), Expect = 2e-13
 Identities = 22/179 (12%), Positives = 47/179 (26%), Gaps = 31/179 (17%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPAC 141
            +L     +       + ++ G  V            +  EG  ++++ ++         
Sbjct: 7   VSLPPGKRTNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLP 66

Query: 142 EE----ALLEASCHGQARLAELLM--GSDLIRPHVAVHS--------LVTACCRGFVDVV 187
            +    AL  A C G   + + L+  G +       V++        L  A     V V 
Sbjct: 67  NDEGITALHNAVCAGHTEIVKFLVQFGVN-------VNAADSDGWTPLHCAASCNNVQVC 119

Query: 188 DTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMK 246
             L++ G  + A                   +     +        Q L        + 
Sbjct: 120 KFLVESGAAVFAMTY----------SDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIM 168

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 69.6 bits (171), Expect = 2e-13
 Identities = 23/185 (12%), Positives = 56/185 (30%), Gaps = 20/185 (10%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKA 134
              +  L  ++  G   LV++++    D +     G   T    AV  GH EI++ L++ 
Sbjct: 35  PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGI--TALHNAVCAGHTEIVKFLVQF 92

Query: 135 GASQPACEE----ALLEASCHGQARLAELLM--GSDL----IRPHVAVHSLVTACCRGFV 184
           G +  A +      L  A+     ++ + L+  G+ +                    G+ 
Sbjct: 93  GVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYT 152

Query: 185 DVVDTLMKCGVDINATDR-----LLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQA 239
                L      +   ++     L     +      +     +  +       ++     
Sbjct: 153 QCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGDCMTIIHREDEDEIEWWWAR 212

Query: 240 GANTD 244
             + +
Sbjct: 213 LNDKE 217

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 56.5 bits (137), Expect = 6e-09
 Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 7/59 (11%)

Query: 573 PDGDGYTPLMLAAREGHGPMCELLISNGAVCDIK-NARGETALSLARKNSSMKNDAELV 630
           P+  G   L    R          I++G    +K N      L  +    S++ + +LV
Sbjct: 1   PEITGQVSLPPGKRTNLRKTGSERIAHGM--RVKFNPLPLALLLDS----SLEGEFDLV 53

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  113 bits (285), Expect = 4e-29
 Identities = 43/178 (24%), Positives = 66/178 (37%), Gaps = 20/178 (11%)

Query: 473 QDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLE 532
               G    ++    GH   +    Y  ADV       +T    +    +     +  L 
Sbjct: 10  TAGEGAMEYLIEWKDGHSPSWVPSSYIAADV---VSEYETPWWTAARKAD-----EQALS 61

Query: 533 FALEKGNRNA---GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDG-DGYTPLMLAAREG 588
             LE  + +A    G  AL   A  G    VRLL   G  ++  D   G T L +AA   
Sbjct: 62  QLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 121

Query: 589 HGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVI-------LDEVARML 639
              + E L+  GA  ++++ RG TAL LAR+           +       L++V  +L
Sbjct: 122 RPEVVEALVELGADIEVEDERGLTALELAREILK-TTPKGNPMQFGRRIGLEKVINVL 178

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  105 bits (265), Expect = 2e-26
 Identities = 31/168 (18%), Positives = 54/168 (32%), Gaps = 15/168 (8%)

Query: 446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKL 505
             +   + G   +            D       +    AA K   +   +L+    DV  
Sbjct: 17  EYLIEWKDGHSPSWVPSSYI---AAD-VVSEYETPWWTAARKADEQALSQLL-EDRDVDA 71

Query: 506 LNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG-NRNA----GGFYALHCAARRGDLDAV 560
           ++++G+TA++      +        +    E G + +     GG  ALH AA     + V
Sbjct: 72  VDENGRTALLFVAGLGSDK-----CVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVV 126

Query: 561 RLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNA 608
             L   G  + V D  G T L LA            +  G    ++  
Sbjct: 127 EALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKV 174

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 82.9 bits (206), Expect = 2e-18
 Identities = 36/202 (17%), Positives = 63/202 (31%), Gaps = 44/202 (21%)

Query: 302 HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLID 361
             G          G + +        AD      T      P   AAR      +  L+ 
Sbjct: 12  GEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYET------PWWTAARKADEQALSQLL- 64

Query: 362 SGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVG 421
              D++   E+G TAL+  A    ++CV++LA+AGAD   +                   
Sbjct: 65  EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD---LDHRDM-------------- 107

Query: 422 FQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAV 481
                    R G             L   A       ++AL+     +++ +D+ G +A+
Sbjct: 108 ---------RGGLTA----------LHMAAGYVRPEVVEALVEL-GADIEVEDERGLTAL 147

Query: 482 MVAASKGHVEVFRELVYAGADV 503
            +A            +  G  +
Sbjct: 148 ELAREILKTTPKGNPMQFGRRI 169

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 82.5 bits (205), Expect = 2e-18
 Identities = 34/188 (18%), Positives = 56/188 (29%), Gaps = 33/188 (17%)

Query: 220 ALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAV 279
             +                  A+   +          T                  W A 
Sbjct: 17  EYLIEWKDGHSPSWVPSSYIAADVVSE--------YETP---------W-------WTAA 52

Query: 280 EYFEITGS--ILRMLLQHLSYNSP-HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRT 336
                      L  LL+    ++    GRT L      G    V +L   GAD     R 
Sbjct: 53  RK----ADEQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD--HRD 106

Query: 337 QKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAG 396
            +     +H+AA      +V++L++ G D+  + E G TAL ++ +  +        + G
Sbjct: 107 MRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFG 166

Query: 397 ADFGLVSV 404
              GL  V
Sbjct: 167 RRIGLEKV 174

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 78.7 bits (195), Expect = 5e-17
 Identities = 42/227 (18%), Positives = 75/227 (33%), Gaps = 61/227 (26%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
              +  + G+S           D+ ++    ET    +A+   E+ +  L +   D   V
Sbjct: 17  EYLIEWKDGHSPSWVPSSYIAADVVSE---YETPWWTAARKADEQALSQLLE-DRDVDAV 72

Query: 403 SVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKAL 462
             +G+                                     + L+FVA  G    ++ L
Sbjct: 73  DENGR-------------------------------------TALLFVAGLGSDKCVRLL 95

Query: 463 IGREELNLDYQDDN-GFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQ 521
                 +LD++D   G +A+ +AA     EV   LV  GAD+++ ++ G TA        
Sbjct: 96  AEA-GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTA-------- 146

Query: 522 NCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGY 568
                    LE A E       G   +    R G    + +L  + +
Sbjct: 147 ---------LELAREILKTTPKG-NPMQFGRRIGLEKVINVLEGQVF 183

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 66.8 bits (164), Expect = 7e-13
 Identities = 33/184 (17%), Positives = 55/184 (29%), Gaps = 46/184 (25%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQK----LFRGFATTIAVREGHLEILEILLKAGAS 137
               +    G+           ADV  +     +       A R+   + L  LL+    
Sbjct: 16  MEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWW------TAARKADEQALSQLLE-DRD 68

Query: 138 QPACEE----ALLEASCHGQARLAELLM--GSDLIRPHVAVHS---------LVTACCRG 182
             A +E    ALL  +  G  +   LL   G+D       +           L  A    
Sbjct: 69  VDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD-------LDHRDMRGGLTALHMAAGYV 121

Query: 183 FVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGAN 242
             +VV+ L++ G DI   D                 +AL  A    + +     +Q G  
Sbjct: 122 RPEVVEALVELGADIEVED-------------ERGLTALELAREILKTTPKGNPMQFGRR 168

Query: 243 TDMK 246
             ++
Sbjct: 169 IGLE 172

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 56.3 bits (137), Expect = 3e-09
 Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 7/61 (11%)

Query: 570 VNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAEL 629
            +   G+G    ++  ++GH P         A  D+  +  ET    A    + K D + 
Sbjct: 7   GSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAA--DV-VSEYETPWWTA----ARKADEQA 59

Query: 630 V 630
           +
Sbjct: 60  L 60

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  112 bits (282), Expect = 8e-29
 Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 9/155 (5%)

Query: 470 LDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKV 529
             +   +    ++ AA  G  +  R L+  GADV   + SG T + L+  N + +     
Sbjct: 7   HHHHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLE----- 61

Query: 530 MLEFALEKG-NRNAG---GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAA 585
           ++E  L+ G + NA    G   L  AA  G L+ V +L   G  VN  D +G+TPL LAA
Sbjct: 62  IVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAA 121

Query: 586 REGHGPMCELLISNGAVCDIKNARGETALSLARKN 620
             GH  + E+L+ NGA  + ++  G+TA  ++  N
Sbjct: 122 MFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDN 156

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 99.0 bits (248), Expect = 3e-24
 Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 10/157 (6%)

Query: 446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKL 505
            L+  A+AG    ++ L+     +++ +D +G++ + +AA  GH+E+   L+  GADV  
Sbjct: 17  KLLEAARAGRDDEVRILMANG-ADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNA 75

Query: 506 LNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG-NRNAG---GFYALHCAARRGDLDAVR 561
           ++ +G T + L+ L  + +     ++E  L+ G + NA    G   LH AA  G L+ V 
Sbjct: 76  VDHAGMTPLRLAALFGHLE-----IVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVE 130

Query: 562 LLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLIS 598
           +L   G  VN  D  G T   ++   G+  + E+L  
Sbjct: 131 VLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQK 167

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 84.0 bits (209), Expect = 5e-19
 Identities = 49/223 (21%), Positives = 77/223 (34%), Gaps = 72/223 (32%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
            +  AAR G    V+ L+ +G D+N +  SG T L ++A     E V+VL K GAD   V
Sbjct: 17  KLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAV 76

Query: 403 SVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKAL 462
             +G                                      +PL   A  G +  ++ L
Sbjct: 77  DHAGM-------------------------------------TPLRLAALFGHLEIVEVL 99

Query: 463 IGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQN 522
           +     +++  D  G + + +AA  GH+E+   L+  GADV   +K GKT          
Sbjct: 100 LKNGA-DVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKT---------- 148

Query: 523 CDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTS 565
                                   A   +   G+ D   +L  
Sbjct: 149 ------------------------AFDISIDNGNEDLAEILQK 167

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 77.0 bits (191), Expect = 1e-16
 Identities = 45/194 (23%), Positives = 75/194 (38%), Gaps = 41/194 (21%)

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
               L  A   G    V +L++ GAD      +  T   P+HLAA  G+  IV+ L+ +G
Sbjct: 14  LGKKLLEAARAGRDDEVRILMANGADVNAEDASGWT---PLHLAAFNGHLEIVEVLLKNG 70

Query: 364 CDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQ 423
            D+N    +G T L ++A +   E V+VL K GAD     + G                 
Sbjct: 71  ADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGH---------------- 114

Query: 424 RAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMV 483
                                +PL   A  G +  ++ L+     +++ QD  G +A  +
Sbjct: 115 ---------------------TPLHLAAMFGHLEIVEVLLKN-GADVNAQDKFGKTAFDI 152

Query: 484 AASKGHVEVFRELV 497
           +   G+ ++   L 
Sbjct: 153 SIDNGNEDLAEILQ 166

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 72.0 bits (178), Expect = 6e-15
 Identities = 37/96 (38%), Positives = 47/96 (48%), Gaps = 3/96 (3%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
            G T LH A   G    V VLL  GAD         T   P+ LAA  G+  IV+ L+ +
Sbjct: 46  SGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMT---PLRLAALFGHLEIVEVLLKN 102

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
           G D+N     G T L ++A +   E V+VL K GAD
Sbjct: 103 GADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD 138

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 68.5 bits (169), Expect = 1e-13
 Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 48/170 (28%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPA 140
             L  AA +G    V+ L++ GADVN +   G+    +A   GHLEI+E+LLK GA   A
Sbjct: 16  KKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNA 75

Query: 141 CEE----ALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVD 196
            +      L  A+  G                               +++V+ L+K G D
Sbjct: 76  VDHAGMTPLRLAALFGH------------------------------LEIVEVLLKNGAD 105

Query: 197 INATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMK 246
           +NA D                 + L  A +   + +V++LL+ GA+ + +
Sbjct: 106 VNAND-------------MEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQ 142

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 67.8 bits (167), Expect = 2e-13
 Identities = 33/90 (36%), Positives = 45/90 (50%), Gaps = 3/90 (3%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
            G T L  A L G    V VLL  GAD         T   P+HLAA  G+  IV+ L+ +
Sbjct: 79  AGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHT---PLHLAAMFGHLEIVEVLLKN 135

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVL 392
           G D+N + + G+TA  IS     E+  ++L
Sbjct: 136 GADVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 56.6 bits (138), Expect = 1e-09
 Identities = 35/91 (38%), Positives = 49/91 (53%), Gaps = 9/91 (9%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKA 134
            + +T L LAA  G++ +V+ LL  GADVN     G   T   +A   GHLEI+E+LLK 
Sbjct: 78  HAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGH--TPLHLAAMFGHLEIVEVLLKN 135

Query: 135 GASQPACEE----ALLEASCHGQARLAELLM 161
           GA   A ++    A   +  +G   LAE+L 
Sbjct: 136 GADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 44.7 bits (107), Expect = 2e-05
 Identities = 32/148 (21%), Positives = 56/148 (37%), Gaps = 45/148 (30%)

Query: 99  LLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAE 158
               G+D+ +KL        A R G  + + IL+  GA   A +         G   L  
Sbjct: 7   HHHHGSDLGKKLL------EAARAGRDDEVRILMANGADVNAEDA-------SGWTPL-- 51

Query: 159 LLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDC 218
                     H+A          G +++V+ L+K G D+NA D             +   
Sbjct: 52  ----------HLA-------AFNGHLEIVEVLLKNGADVNAVD-------------HAGM 81

Query: 219 SALVAAVVSRQVSVVQLLLQAGANTDMK 246
           + L  A +   + +V++LL+ GA+ +  
Sbjct: 82  TPLRLAALFGHLEIVEVLLKNGADVNAN 109

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 85.7 bits (213), Expect = 5e-19
 Identities = 51/262 (19%), Positives = 83/262 (31%), Gaps = 58/262 (22%)

Query: 82  TALFLAAHSGNVTLVKKLL-STGADVNQKLFRGFATT---IAVREGHLEILEILLKAGAS 137
           + L LAA   +V  + KLL   G +V+Q+   G   T   IA    +LE   +L++A   
Sbjct: 5   SPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGE--TALHIAALYDNLEAAMVLMEAAPE 62

Query: 138 QPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDI 197
                E +      GQ  L            H+AV           V++V  L+  G  +
Sbjct: 63  --LVFEPMTSELYEGQTAL------------HIAVI-------NQNVNLVRALLARGASV 101

Query: 198 NATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTT 257
           +A     +   +P          L  A       +V+LL++ GA+   +  LG    +T 
Sbjct: 102 SARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLG----NT- 156

Query: 258 TGEEFRVGAGLAEP--YAITWCAVEYFEITGSILRMLLQH--------LSYNSPHYGRTL 307
                             I             +  +LL +        L     + G T 
Sbjct: 157 -------------VLHILILQP---NKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTP 200

Query: 308 LHHAILCGCTGAVAVLLSCGAD 329
              A + G       L+     
Sbjct: 201 FKLAGVEGNIVMFQHLMQKRKH 222

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 81.1 bits (201), Expect = 2e-17
 Identities = 32/174 (18%), Positives = 54/174 (31%), Gaps = 54/174 (31%)

Query: 477 GFSAVMVAASKGHVEVFRE-LVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFAL 535
             S +++AA +  V+   + L + G +V      G+T                       
Sbjct: 3   WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGET----------------------- 39

Query: 536 EKGNRNAGGFYALHCAARRGDLDAVRLLTSRG-----YGVNVPDGDGYTPLMLAAREGHG 590
                      ALH AA   +L+A  +L           +     +G T L +A    + 
Sbjct: 40  -----------ALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNV 88

Query: 591 PMCELLISNGAVCDIKN-------------ARGETALSLARKNSSMKNDAELVI 631
            +   L++ GA    +                GE  LS A    S +    L+I
Sbjct: 89  NLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGS-EEIVRLLI 141

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 69.9 bits (172), Expect = 1e-13
 Identities = 43/296 (14%), Positives = 82/296 (27%), Gaps = 97/296 (32%)

Query: 118 IAVREGHLEIL-EILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLV 176
           +A +E  ++ L ++L   G         + +    G+  L            H+A     
Sbjct: 9   LAAKENDVQALSKLLKFEGCE-------VHQRGAMGETAL------------HIAALY-- 47

Query: 177 TACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLL 236
                  ++    LM+   ++             +       +AL  AV+++ V++V+ L
Sbjct: 48  -----DNLEAAMVLMEAAPELVFEP--------MTSELYEGQTALHIAVINQNVNLVRAL 94

Query: 237 LQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHL 296
           L  GA+   +     + +                                          
Sbjct: 95  LARGASVSARATGSVFHYRPH--------------------------------------- 115

Query: 297 SYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQ----KTEFHPIHLAARLGY 352
             N  +YG   L  A   G    V +L+  GAD    IR Q     T    +H+      
Sbjct: 116 --NLIYYGEHPLSFAACVGSEEIVRLLIEHGAD----IRAQDSLGNT---VLHILILQPN 166

Query: 353 STIVQS----LIDSGCDLNTKTES------GETALMISAKYKQEECVKVLAKAGAD 398
            T        L+      + K+        G T   ++         + L +    
Sbjct: 167 KTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH 222

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  108 bits (273), Expect = 1e-27
 Identities = 41/153 (26%), Positives = 65/153 (42%), Gaps = 10/153 (6%)

Query: 474 DDNGFSAVMVAASKGHVEVFRELV-YAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLE 532
           +      ++ AA  G VE  ++L      + + +     T +  +            ++E
Sbjct: 5   NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVS-----VVE 59

Query: 533 FALEKG-NRNA---GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREG 588
           + L+ G + +A   GG   LH A   G  +   LL   G  VNV D   +TPL  AA +G
Sbjct: 60  YLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKG 119

Query: 589 HGPMCELLISNGAVCDIKNARGETALSLARKNS 621
              +C+LL+ +GA    KN  G T L L +   
Sbjct: 120 KYEICKLLLQHGADPTKKNRDGNTPLDLVKDGD 152

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 85.5 bits (213), Expect = 1e-19
 Identities = 47/240 (19%), Positives = 75/240 (31%), Gaps = 75/240 (31%)

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGF 422
           G   N++    +  L+ +AK    E VK L    +                         
Sbjct: 1   GAMGNSE---ADRQLLEAAKAGDVETVKKLCTVQSV------------------------ 33

Query: 423 QRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVM 482
                      N  +       +PL F A    ++ ++ L+     ++  +D  G   + 
Sbjct: 34  -----------NC-RDIEGRQSTPLHFAAGYNRVSVVEYLLQH-GADVHAKDKGGLVPLH 80

Query: 483 VAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNA 542
            A S GH EV   LV  GA V + +    T                              
Sbjct: 81  NACSYGHYEVAELLVKHGAVVNVADLWKFT------------------------------ 110

Query: 543 GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV 602
                LH AA +G  +  +LL   G      + DG TPL L   +G   + +LL  + A+
Sbjct: 111 ----PLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVK-DGDTDIQDLLRGDAAL 165

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 82.8 bits (206), Expect = 1e-18
 Identities = 33/121 (27%), Positives = 45/121 (37%), Gaps = 14/121 (11%)

Query: 539 NRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNV--PDGDGYTPLMLAAREGHGPMCELL 596
             N+     L  AA+ GD++ V+ L +    VN    +G   TPL  AA      + E L
Sbjct: 3   MGNSEADRQLLEAAKAGDVETVKKLCTVQ-SVNCRDIEGRQSTPLHFAAGYNRVSVVEYL 61

Query: 597 ISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGT 656
           + +GA    K+  G   L  A                EVA +LV  G  V         T
Sbjct: 62  LQHGADVHAKDKGGLVPLHNACSYGHY----------EVAELLVKHGAVVNVADLWKF-T 110

Query: 657 P 657
           P
Sbjct: 111 P 111

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 70.9 bits (175), Expect = 2e-14
 Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 3/96 (3%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
              T LH A        V  LL  GAD     +       P+H A   G+  + + L+  
Sbjct: 41  RQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLV---PLHNACSYGHYEVAELLVKH 97

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
           G  +N       T L  +A   + E  K+L + GAD
Sbjct: 98  GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGAD 133

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 68.2 bits (168), Expect = 1e-13
 Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 4/97 (4%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSC-GADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLID 361
                L  A   G    V  L +    + +     +  +  P+H AA     ++V+ L+ 
Sbjct: 7   EADRQLLEAAKAGDVETVKKLCTVQSVNCR---DIEGRQSTPLHFAAGYNRVSVVEYLLQ 63

Query: 362 SGCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
            G D++ K + G   L  +  Y   E  ++L K GA 
Sbjct: 64  HGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAV 100

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 67.8 bits (167), Expect = 2e-13
 Identities = 39/226 (17%), Positives = 58/226 (25%), Gaps = 74/226 (32%)

Query: 343 PIHLAARLGYSTIVQSLIDS-GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGL 401
            +  AA+ G    V+ L      +         T L  +A Y +   V+ L + GAD   
Sbjct: 11  QLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHA 70

Query: 402 VSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKA 461
               G                                       PL      G     + 
Sbjct: 71  KDKGGL-------------------------------------VPLHNACSYGHYEVAEL 93

Query: 462 LIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQ 521
           L+      ++  D   F+ +  AA+KG  E+ + L+  GAD    N+ G T         
Sbjct: 94  LVKH-GAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNT--------- 143

Query: 522 NCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRG 567
                                     L      GD D   LL    
Sbjct: 144 -------------------------PLDLVK-DGDTDIQDLLRGDA 163

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 67.4 bits (166), Expect = 3e-13
 Identities = 25/95 (26%), Positives = 35/95 (36%), Gaps = 4/95 (4%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
            G   LH+A   G      +L+  GA        + T   P+H AA  G   I + L+  
Sbjct: 74  GGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFT---PLHEAAAKGKYEICKLLLQH 130

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGA 397
           G D   K   G T L +  K    +   +L    A
Sbjct: 131 GADPTKKNRDGNTPLDL-VKDGDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 60.1 bits (147), Expect = 8e-11
 Identities = 38/173 (21%), Positives = 58/173 (33%), Gaps = 45/173 (26%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLST-GADVNQKLFRGFATT---IAVREGHLEILEILLK 133
                 L  AA +G+V  VKKL +    +      R    T    A     + ++E LL+
Sbjct: 6   SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQS--TPLHFAAGYNRVSVVEYLLQ 63

Query: 134 AGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKC 193
            GA        +      G                 V +H+   AC  G  +V + L+K 
Sbjct: 64  HGAD-------VHAKDKGGL----------------VPLHN---ACSYGHYEVAELLVKH 97

Query: 194 GVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMK 246
           G  +N  D                 + L  A    +  + +LLLQ GA+   K
Sbjct: 98  GAVVNVAD-------------LWKFTPLHEAAAKGKYEICKLLLQHGADPTKK 137

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 49.3 bits (119), Expect = 4e-07
 Identities = 18/55 (32%), Positives = 25/55 (45%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGA 136
           T L  AA  G   + K LL  GAD  +K   G      V++G  +I ++L    A
Sbjct: 110 TPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKDGDTDIQDLLRGDAA 164

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  107 bits (270), Expect = 1e-27
 Identities = 34/159 (21%), Positives = 56/159 (35%), Gaps = 38/159 (23%)

Query: 474 DDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEF 533
           +  G + + +A+ KG +     L+  G+D  + + +G T                     
Sbjct: 7   NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTP-------------------- 46

Query: 534 ALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMC 593
                         LH A   G L  V LL      VN       +PL  AA+ GH  + 
Sbjct: 47  --------------LHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIV 92

Query: 594 ELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVIL 632
           +LL+S GA  +  N  G   +         ++   L++L
Sbjct: 93  KLLLSYGASRNAVNIFGLRPVDYT----DDESMKSLLLL 127

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 93.6 bits (234), Expect = 8e-23
 Identities = 31/157 (19%), Positives = 54/157 (34%), Gaps = 35/157 (22%)

Query: 446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKL 505
            L   +  GDI +++ L+     + + +D  G++ +  A + GH++V   L+   A V  
Sbjct: 13  LLHIASIKGDIPSVEYLLQNG-SDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT 71

Query: 506 LNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTS 565
                 +                                   LH AA+ G +D V+LL S
Sbjct: 72  TGYQNDS----------------------------------PLHDAAKNGHVDIVKLLLS 97

Query: 566 RGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV 602
            G   N  +  G  P+     E    +  L   N + 
Sbjct: 98  YGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 75.9 bits (188), Expect = 1e-16
 Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 7/140 (5%)

Query: 299 NSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQS 358
            + H G TLLH A + G   +V  LL  G+D         T   P+H A   G+  +V+ 
Sbjct: 5   FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWT---PLHEACNHGHLKVVEL 61

Query: 359 LIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWW 418
           L+     +NT     ++ L  +AK    + VK+L   GA    V++ G            
Sbjct: 62  LLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDE-- 119

Query: 419 SVGFQRAVLDIIRSGNIPKS 438
               +  +L   ++ +   S
Sbjct: 120 --SMKSLLLLPEKNESSSAS 137

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 65.9 bits (162), Expect = 4e-13
 Identities = 34/165 (20%), Positives = 58/165 (35%), Gaps = 44/165 (26%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKAGASQ 138
           T L +A+  G++  V+ LL  G+D N K   G+  T    A   GHL+++E+LL+  A  
Sbjct: 12  TLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGW--TPLHEACNHGHLKVVELLLQHKALV 69

Query: 139 PACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDIN 198
                          + L            H A  +       G VD+V  L+  G   N
Sbjct: 70  NT-------TGYQNDSPL------------HDAAKN-------GHVDIVKLLLSYGASRN 103

Query: 199 ATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANT 243
           A +                   +         S++ L  +  +++
Sbjct: 104 AVN-------------IFGLRPVDYTDDESMKSLLLLPEKNESSS 135

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 64.4 bits (158), Expect = 2e-12
 Identities = 26/169 (15%), Positives = 51/169 (30%), Gaps = 50/169 (29%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
            +H+A+  G    V+ L+ +G D N K  +G T L  +  +   + V++L +  A     
Sbjct: 13  LLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL---- 68

Query: 403 SVSGQSASSI-AGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKA 461
                    +                                 SPL   A+ G +  +K 
Sbjct: 69  ---------VNTTGYQ---N----------------------DSPLHDAAKNGHVDIVKL 94

Query: 462 LIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSG 510
           L+     + +  +  G   V     +    +          + L  K+ 
Sbjct: 95  LLSYGA-SRNAVNIFGLRPVDYTDDESMKSL----------LLLPEKNE 132

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 63.2 bits (155), Expect = 4e-12
 Identities = 29/205 (14%), Positives = 52/205 (25%), Gaps = 73/205 (35%)

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGF 422
           G D       GET L I++       V+ L + G+D                        
Sbjct: 1   GIDPF-TNHRGETLLHIASIKGDIPSVEYLLQNGSD------------------------ 35

Query: 423 QRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVM 482
                        P   + A ++PL      G +  ++ L+  +   ++       S + 
Sbjct: 36  -------------PNVKDHAGWTPLHEACNHGHLKVVELLLQHKA-LVNTTGYQNDSPLH 81

Query: 483 VAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNA 542
            AA  GHV++ + L+  GA    +N  G                                
Sbjct: 82  DAAKNGHVDIVKLLLSYGASRNAVNIFGLR------------------------------ 111

Query: 543 GGFYALHCAARRGDLDAVRLLTSRG 567
                +           + L     
Sbjct: 112 ----PVDYTDDESMKSLLLLPEKNE 132

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 55.5 bits (135), Expect = 2e-09
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGA 136
             + + L  AA +G+V +VK LLS GA  N     G         E    +L +  K  +
Sbjct: 74  YQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133

Query: 137 S 137
           S
Sbjct: 134 S 134

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 45.9 bits (110), Expect = 4e-06
 Identities = 32/147 (21%), Positives = 49/147 (33%), Gaps = 45/147 (30%)

Query: 103 GADVNQKLFRGFATT---IAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAEL 159
           G D      RG   T   IA  +G +  +E LL+ G+               G       
Sbjct: 1   GIDPF-TNHRGE--TLLHIASIKGDIPSVEYLLQNGSD-------PNVKDHAGW------ 44

Query: 160 LMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCS 219
                       +H    AC  G + VV+ L++    +N T                + S
Sbjct: 45  ----------TPLHE---ACNHGHLKVVELLLQHKALVNTTG-------------YQNDS 78

Query: 220 ALVAAVVSRQVSVVQLLLQAGANTDMK 246
            L  A  +  V +V+LLL  GA+ +  
Sbjct: 79  PLHDAAKNGHVDIVKLLLSYGASRNAV 105

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  114 bits (286), Expect = 1e-27
 Identities = 50/293 (17%), Positives = 80/293 (27%), Gaps = 60/293 (20%)

Query: 343 PIHLAARLGYST---IVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADF 399
              +AA  G S+    +  L+ S   +         A  ++A+      +  L +     
Sbjct: 95  ICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPT- 153

Query: 400 GLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAAL 459
                  +  + I   N+                                 A+ G +  L
Sbjct: 154 -------EIMAMIQAENYH---------------------------AFRLAAENGHLHVL 179

Query: 460 KALI--GREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLS 517
             L      E     Q +N ++    A  +GH  V   L+     +              
Sbjct: 180 NRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKY 239

Query: 518 -ELNQNCDLFEKVMLEFALEKGNRN-----------AGGFYALHCAARRGD---LDAVRL 562
                   +     +  A +  N +             GFY L    RR D   LD +R 
Sbjct: 240 VNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRF 299

Query: 563 LTS-----RGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARG 610
           L S              GD    L LA R G+   C LL+S  +V  +  A  
Sbjct: 300 LLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVLALTKANN 352

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 94.6 bits (235), Expect = 6e-21
 Identities = 34/313 (10%), Positives = 83/313 (26%), Gaps = 46/313 (14%)

Query: 304 GRTLLHHAILCGCTGAVAV---LLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLI 360
              +   A + GC+ A+     LL+     +     Q   +    LAA  G+  ++  L 
Sbjct: 92  SEVICFVAAITGCSSALDTLCLLLTSDEIVKV---IQAENYQAFRLAAENGHLHVLNRLC 148

Query: 361 DSGCDLNT--KTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSI---AGS 415
           +                A  ++A+      +  L +         +  ++  +    A  
Sbjct: 149 ELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVG 208

Query: 416 NWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDD 475
                G    +  ++    +   +        +   + G+      +        +  D 
Sbjct: 209 R----GHHNVINFLLDCPVMLAYAE-------IHEFEYGEKYVNPFIARHVNRLKEMHD- 256

Query: 476 NGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKV------ 529
               A  ++   G  ++           K     G   +       +  L + +      
Sbjct: 257 ----AFKLSNPDGVFDLVT---------KSECLQGFYMLRNLIRRNDEVLLDDIRFLLSI 303

Query: 530 -MLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREG 588
             ++               L  A R G+  A  LL S    + +   + Y    +    G
Sbjct: 304 PGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVLALTKANNY---YINETGG 360

Query: 589 HGPMCELLISNGA 601
              +  + + +  
Sbjct: 361 RLDLRAVALEHHH 373

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 79.2 bits (195), Expect = 7e-16
 Identities = 25/187 (13%), Positives = 44/187 (23%), Gaps = 39/187 (20%)

Query: 435 IPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFR 494
           +P + N+     L+ +  A      K L   +      + +       +      ++   
Sbjct: 54  LPGTKNMEQVRQLLCLYYAHYNRNAKQLW-SDAHKKGIKSEVICFVAAITGCSSALDTLC 112

Query: 495 ELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARR 554
            L+ +   VK++      A                                     AA  
Sbjct: 113 LLLTSDEIVKVIQAENYQA----------------------------------FRLAAEN 138

Query: 555 GDLDAVRLLTSRGYGVNVPD--GDGYTPLMLAAREGHGPMCELLISNGAVCDIKN--ARG 610
           G L  +  L        +     + Y    LAA  GH  +   L             A  
Sbjct: 139 GHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAEN 198

Query: 611 ETALSLA 617
             A   A
Sbjct: 199 YYAFRWA 205

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 78.4 bits (193), Expect = 1e-15
 Identities = 36/308 (11%), Positives = 71/308 (23%), Gaps = 60/308 (19%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGA 136
           +       +   S  +  +  LL++   V       + A  +A   GHL +L  L +   
Sbjct: 93  EVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAP 152

Query: 137 SQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVD 196
           ++                              + A      A   G + V++ L +    
Sbjct: 153 TEIMAM-----IQAEN----------------YHAFRL---AAENGHLHVLNRLCELAPT 188

Query: 197 INATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWS--W 254
                          +      +   AAV     +V+  LL                   
Sbjct: 189 EATAM----------IQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEK 238

Query: 255 DTTTGEEFRVGAGLAEPYAITWCAVE-YFEITGSILRMLLQHLSYNSPHYGRTLLHHAIL 313
                    V        A      +  F++           ++ +    G  +L + I 
Sbjct: 239 YVNPFIARHVNRLKEMHDAFKLSNPDGVFDL-----------VTKSECLQGFYMLRNLIR 287

Query: 314 CGCTGAVAVL--------LSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCD 365
                 +  +        +   A               + LA RLG       L+     
Sbjct: 288 RNDEVLLDDIRFLLSIPGIKALAPTATIPGDANE---LLRLALRLGNQGACALLLSIPSV 344

Query: 366 LNTKTESG 373
           L     + 
Sbjct: 345 LALTKANN 352

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 75.4 bits (185), Expect = 1e-14
 Identities = 24/149 (16%), Positives = 47/149 (31%), Gaps = 8/149 (5%)

Query: 474 DDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEF 533
                +  +   +  + E     +    +++      +   +L     + +   K +   
Sbjct: 31  QHFISANELSLMTLSYKEAIHIFLPGTKNME------QVRQLLCLYYAHYNRNAKQLWSD 84

Query: 534 ALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMC 593
           A +KG ++    +          LD + LL +    V V   + Y    LAA  GH  + 
Sbjct: 85  AHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVL 144

Query: 594 ELLISNGAVCDIKN--ARGETALSLARKN 620
             L        +    A    A  LA +N
Sbjct: 145 NRLCELAPTEIMAMIQAENYHAFRLAAEN 173

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 70.7 bits (173), Expect = 3e-13
 Identities = 49/294 (16%), Positives = 92/294 (31%), Gaps = 59/294 (20%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKA 134
             +  A  LAA +G++ ++ +L          + +        +A   GHL +L  L + 
Sbjct: 126 AENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCEL 185

Query: 135 GASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCG 194
             ++         A    +   A             A      A  RG  +V++ L+ C 
Sbjct: 186 APTEAT-------AMIQAENYYA----------FRWA------AVGRGHHNVINFLLDCP 222

Query: 195 VDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSW 254
           V +   +           H        V   ++R V+ ++ +  A   ++          
Sbjct: 223 VMLAYAEI----------HEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVF----- 267

Query: 255 DTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNS-------PHYGRTL 307
           D  T  E   G      Y +        E+    +R LL      +       P     L
Sbjct: 268 DLVTKSECLQGF-----YMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANEL 322

Query: 308 LHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLID 361
           L  A+  G  GA A+LLS  +          T+ +  ++    G   +    ++
Sbjct: 323 LRLALRLGNQGACALLLSIPSV------LALTKANNYYINETGGRLDLRAVALE 370

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 55.3 bits (133), Expect = 3e-08
 Identities = 33/327 (10%), Positives = 76/327 (23%), Gaps = 72/327 (22%)

Query: 120 VREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTAC 179
           +   + E + I L    +     + L     H      +L   SD  +  +    +    
Sbjct: 42  MTLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLW--SDAHKKGIKSEVICFVA 99

Query: 180 ----CRGFVDVVDTLMKCGVDINATD-------------------RLLLQ---SLKPSLH 213
               C   +D +  L+     +                         L +   +   ++ 
Sbjct: 100 AITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMI 159

Query: 214 TNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYA 273
              +  A   A  +  + V+  L +                     E +         YA
Sbjct: 160 QAENYHAFRLAAENGHLHVLNRLCELAPTEATA---------MIQAENY---------YA 201

Query: 274 ITWCAVEYFEITG--SILRMLLQH--LSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGAD 329
             W AV      G  +++  LL    +   +  +        +       V  L      
Sbjct: 202 FRWAAVGR----GHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDA 257

Query: 330 AQCPIR----------TQKTEFHPIHLAARLGYSTIVQSL--------IDSGCDLNTKTE 371
            +                   F+ +    R     ++  +        I +     T   
Sbjct: 258 FKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPG 317

Query: 372 SGETALMISAKYKQEECVKVLAKAGAD 398
                L ++ +   +    +L    + 
Sbjct: 318 DANELLRLALRLGNQGACALLLSIPSV 344

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 43.4 bits (102), Expect = 2e-04
 Identities = 12/61 (19%), Positives = 19/61 (31%), Gaps = 2/61 (3%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGAS 137
                 L LA   GN      LLS  + +       +   I    G L++  + L+    
Sbjct: 317 GDANELLRLALRLGNQGACALLLSIPSVLALTKANNYY--INETGGRLDLRAVALEHHHH 374

Query: 138 Q 138
            
Sbjct: 375 H 375

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  106 bits (267), Expect = 4e-27
 Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 11/138 (7%)

Query: 469 NLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEK 528
            +     +  + +  AA++G VE  R+L+ AGAD   LN+ G+  I +  +         
Sbjct: 4   GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMGS------A 57

Query: 529 VMLEFALEKG-NRNA----GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLML 583
            + E  L  G   N          +H AAR G LD + +L   G  ++V D  G  P+ L
Sbjct: 58  QVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDL 117

Query: 584 AAREGHGPMCELLISNGA 601
           A  +GH  +   L +   
Sbjct: 118 AEEQGHRDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 76.7 bits (190), Expect = 8e-17
 Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 3/96 (3%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
           +GR  +   ++ G      +LL  GA+  C      T   P+H AAR G+   +  L  +
Sbjct: 44  FGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTR--PVHDAAREGFLDTLVVLHRA 100

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
           G  L+     G   + ++ +    +  + L  A  D
Sbjct: 101 GARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 74.8 bits (185), Expect = 4e-16
 Identities = 29/160 (18%), Positives = 49/160 (30%), Gaps = 38/160 (23%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
            +  AA  G    V+ L+++G D N     G   + +       +  ++L   GA+    
Sbjct: 15  GLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQV-MMMGSAQVAELLLLHGAE---- 69

Query: 403 SVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKAL 462
                                              +    +  P+   A+ G +  L  L
Sbjct: 70  --------------------------------PNCADPATLTRPVHDAAREGFLDTLVVL 97

Query: 463 IGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGAD 502
                  LD  D  G   V +A  +GH ++ R L  A  D
Sbjct: 98  HRA-GARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 72.1 bits (178), Expect = 3e-15
 Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 5/97 (5%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
                L  A   G    V  LL  GAD     R  +    PI +    G + + + L+  
Sbjct: 11  SSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRR---PIQVMMM-GSAQVAELLLLH 66

Query: 363 GCDLNTKTESGET-ALMISAKYKQEECVKVLAKAGAD 398
           G + N    +  T  +  +A+    + + VL +AGA 
Sbjct: 67  GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGAR 103

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 69.0 bits (170), Expect = 3e-14
 Identities = 33/165 (20%), Positives = 49/165 (29%), Gaps = 38/165 (23%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGAS 137
            S    L  AA  G V  V++LL  GAD N     G      +  G  ++ E+LL  GA 
Sbjct: 10  GSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMGSAQVAELLLLHGAE 69

Query: 138 QPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDI 197
                      +              D       VH    A   GF+D +  L + G  +
Sbjct: 70  --------PNCA--------------DPATLTRPVHD---AAREGFLDTLVVLHRAGARL 104

Query: 198 NATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGAN 242
           +  D                   +  A       + + L  A  +
Sbjct: 105 DVCD-------------AWGRLPVDLAEEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 65.9 bits (162), Expect = 5e-13
 Identities = 18/91 (19%), Positives = 29/91 (31%), Gaps = 11/91 (12%)

Query: 567 GYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKND 626
             G+++  G     L  AA  G       L+  GA  +  N  G   + +    S+    
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMMGSA---- 57

Query: 627 AELVILDEVARMLVLGGGHVLKHTKGGKGTP 657
                  +VA +L+L G             P
Sbjct: 58  -------QVAELLLLHGAEPNCADPATLTRP 81

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 50.1 bits (121), Expect = 2e-07
 Identities = 22/145 (15%), Positives = 39/145 (26%), Gaps = 40/145 (27%)

Query: 103 GADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLM 161
              ++            A   G +E +  LL+AGA            +  G+  +     
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGAD-------PNALNRFGRRPI----- 49

Query: 162 GSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSAL 221
                   V           G   V + L+  G + N  D                   +
Sbjct: 50  -------QVM--------MMGSAQVAELLLLHGAEPNCADP------------ATLTRPV 82

Query: 222 VAAVVSRQVSVVQLLLQAGANTDMK 246
             A     +  + +L +AGA  D+ 
Sbjct: 83  HDAAREGFLDTLVVLHRAGARLDVC 107

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 41.7 bits (99), Expect = 1e-04
 Identities = 27/158 (17%), Positives = 44/158 (27%), Gaps = 40/158 (25%)

Query: 175 LVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQ 234
           L TA  RG V+ V  L++ G D NA +                   +    +     V +
Sbjct: 16  LATAAARGQVETVRQLLEAGADPNALN-------------RFGRRPIQVM-MMGSAQVAE 61

Query: 235 LLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVE-YFEITGSILRMLL 293
           LLL  GA  +                             +   A E + +       +L 
Sbjct: 62  LLLLHGAEPNCADPATLTR-------------------PVHDAAREGFLDTL----VVLH 98

Query: 294 QH-LSYNSP-HYGRTLLHHAILCGCTGAVAVLLSCGAD 329
           +     +    +GR  +  A   G       L +   D
Sbjct: 99  RAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  109 bits (274), Expect = 6e-27
 Identities = 45/277 (16%), Positives = 85/277 (30%), Gaps = 59/277 (21%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
              +  + G+S           D+ ++    ET    +A+   E+ +  L +   D   V
Sbjct: 18  EYLIEWKDGHSPSWVPSSYIAADVVSE---YETPWWTAARKADEQALSQLLE-DRDVDAV 73

Query: 403 SVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKAL 462
             +G++                                      L+FVA  G    ++ L
Sbjct: 74  DENGRT-------------------------------------ALLFVAGLGSDKCVRLL 96

Query: 463 IGREELNLDYQD-DNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQ 521
                 +LD++D   G +A+ +AA     EV   LV  GAD+++ ++ G TA+ L+    
Sbjct: 97  AEAG-ADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREIL 155

Query: 522 NCDLFEKVMLEFALEKG-NRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTP 580
                        ++ G          +         +   ++  RG G           
Sbjct: 156 K-----TTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGK--------DV 202

Query: 581 LMLAAREGHGPMCELLISNGAVCDIKNARGETALSLA 617
             L   +  G    +   + A  +      E  L  A
Sbjct: 203 EYLVRWKDGGDCEWVKGVHVA--EDVAKDYEDGLEYA 237

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  106 bits (267), Expect = 5e-26
 Identities = 49/289 (16%), Positives = 74/289 (25%), Gaps = 100/289 (34%)

Query: 367 NTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAV 426
           +     G    +I  K          +   AD             +              
Sbjct: 9   SRTAGEGAMEYLIEWKDGHSPSWVPSSYIAAD-------------VVSEYE--------- 46

Query: 427 LDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALI-GREELNLDYQDDNGFSAVMVAA 485
                             +P    A+  D  AL  L+  R   ++D  D+NG +A++  A
Sbjct: 47  ------------------TPWWTAARKADEQALSQLLEDR---DVDAVDENGRTALLFVA 85

Query: 486 SKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGF 545
             G  +  R L  AGAD+                                 +  R   G 
Sbjct: 86  GLGSDKCVRLLAEAGADLD-------------------------------HRDMRG--GL 112

Query: 546 YALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGA---- 601
            ALH AA     + V  L   G  + V D  G T L LA            +  G     
Sbjct: 113 TALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGL 172

Query: 602 ----------------VCDI--KNARGETALSLARKNSSMKNDAELVIL 632
                           V +I  K  +G+    L R      +   +  +
Sbjct: 173 EKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDG-GDCEWVKGV 220

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  104 bits (263), Expect = 2e-25
 Identities = 42/288 (14%), Positives = 83/288 (28%), Gaps = 58/288 (20%)

Query: 302 HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLID 361
             G          G + +        AD      T      P   AAR      +  L+ 
Sbjct: 13  GEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYET------PWWTAARKADEQALSQLL- 65

Query: 362 SGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVG 421
              D++   E+G TAL+  A    ++CV++LA+AGAD                       
Sbjct: 66  EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD----------------------- 102

Query: 422 FQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAV 481
                        +         + L   A       ++AL+     +++ +D+ G +A+
Sbjct: 103 -------------LDHRDMRGGLTALHMAAGYVRPEVVEALVEL-GADIEVEDERGLTAL 148

Query: 482 MVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRN 541
            +A            +  G  +          ++  ++ +  ++      E   ++G   
Sbjct: 149 ELAREILKTTPKGNPMQFGRRI---GLEKVINVLEGQVFEYAEV-----DEIVEKRGK-- 198

Query: 542 AGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGH 589
             G    +    +   D   +           D +    L  A  E  
Sbjct: 199 --GKDVEYLVRWKDGGDCEWVKGVHVAEDVAKDYE--DGLEYAVAESV 242

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 83.8 bits (208), Expect = 3e-18
 Identities = 38/206 (18%), Positives = 67/206 (32%), Gaps = 25/206 (12%)

Query: 288 ILRMLLQHLSYNSP-HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHL 346
            L  LL+    ++    GRT L      G    V +L   GAD     R  +     +H+
Sbjct: 60  ALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD--HRDMRGGLTALHM 117

Query: 347 AARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSG 406
           AA      +V++L++ G D+  + E G TAL ++ +  +        + G   GL  V  
Sbjct: 118 AAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVIN 177

Query: 407 QSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALI--G 464
                +             V +I+                   V                
Sbjct: 178 VLEGQVFEYA--------EVDEIV-------EKRGKGKDVEYLVRWKDGGDCEWVKGVHV 222

Query: 465 REELNLDYQDDNGFSAVMVAASKGHV 490
            E++  DY+D      +  A ++  +
Sbjct: 223 AEDVAKDYED-----GLEYAVAESVI 243

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 66.9 bits (164), Expect = 2e-12
 Identities = 36/263 (13%), Positives = 67/263 (25%), Gaps = 70/263 (26%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQK----LFRGFATTIAVREGHLEILEILLKAGAS 137
               +    G+           ADV  +     +       A R+   + L  LL+    
Sbjct: 17  MEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWW------TAARKADEQALSQLLE-DRD 69

Query: 138 QPACEE----ALLEASCHGQARLAELLMG-------SDLIRPHVAVHSLVTACCRGFVDV 186
             A +E    ALL  +  G  +   LL          D+     A+H    A      +V
Sbjct: 70  VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALH---MAAGYVRPEV 126

Query: 187 VDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMK 246
           V+ L++ G DI   D                 +AL  A    + +     +Q G    ++
Sbjct: 127 VEALVELGADIEVED-------------ERGLTALELAREILKTTPKGNPMQFGRRIGLE 173

Query: 247 VRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRT 306
                                      +             +  ++ +         G+ 
Sbjct: 174 --------------------------KVINVLEGQVFEYAEVDEIVEKR------GKGKD 201

Query: 307 LLHHAILCGCTGAVAVLLSCGAD 329
           + +            V     A+
Sbjct: 202 VEYLVRWKDGGDCEWVKGVHVAE 224

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  106 bits (266), Expect = 7e-27
 Identities = 37/146 (25%), Positives = 56/146 (38%), Gaps = 11/146 (7%)

Query: 474 DDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEF 533
            +     +  AA++G VE  R L+ AGA+    N  G+  I +  +  +       + E 
Sbjct: 9   MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMG-SAR-----VAEL 62

Query: 534 ALEKG-NRNA----GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREG 588
            L  G   N          +H AAR G LD + +L   G  ++V D  G  P+ LA   G
Sbjct: 63  LLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELG 122

Query: 589 HGPMCELLISNGAVCDIKNARGETAL 614
           H  +   L +        N     A 
Sbjct: 123 HRDVARYLRAAAGGTRGSNHARIDAA 148

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 81.4 bits (202), Expect = 3e-18
 Identities = 31/187 (16%), Positives = 56/187 (29%), Gaps = 43/187 (22%)

Query: 327 GADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQE 386
            A +     + +     +  AA  G    V++L+++G + N     G   + +       
Sbjct: 4   AAGS-----SMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQV-MMMGSA 57

Query: 387 ECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSP 446
              ++L   GA+      +  +                                     P
Sbjct: 58  RVAELLLLHGAEPNCADPATLT------------------------------------RP 81

Query: 447 LMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLL 506
           +   A+ G +  L  L       LD +D  G   V +A   GH +V R L  A    +  
Sbjct: 82  VHDAAREGFLDTLVVLHRAG-ARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGS 140

Query: 507 NKSGKTA 513
           N +   A
Sbjct: 141 NHARIDA 147

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 75.6 bits (187), Expect = 3e-16
 Identities = 33/224 (14%), Positives = 56/224 (25%), Gaps = 79/224 (35%)

Query: 367 NTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAV 426
            +  E     L  +A   + E V+ L +AGA+    +  G+                   
Sbjct: 6   GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRR------------------ 47

Query: 427 LDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGF-SAVMVAA 485
                              P+  +   G     + L+       +  D       V  AA
Sbjct: 48  -------------------PIQVMMM-GSARVAELLLLHG-AEPNCADPATLTRPVHDAA 86

Query: 486 SKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGF 545
            +G ++    L  AGA + + +  G+                                  
Sbjct: 87  REGFLDTLVVLHRAGARLDVRDAWGRLP-------------------------------- 114

Query: 546 YALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGH 589
             +  A   G  D  R L +   G       G     + A EG 
Sbjct: 115 --VDLAEELGHRDVARYLRAAAGGTR-----GSNHARIDAAEGP 151

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 75.6 bits (187), Expect = 3e-16
 Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 3/97 (3%)

Query: 302 HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLID 361
            YGR  +   ++ G      +LL  GA+  C      T   P+H AAR G+   +  L  
Sbjct: 43  SYGRRPIQVMMM-GSARVAELLLLHGAEPNCADPATLTR--PVHDAAREGFLDTLVVLHR 99

Query: 362 SGCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
           +G  L+ +   G   + ++ +    +  + L  A   
Sbjct: 100 AGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG 136

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 71.4 bits (176), Expect = 1e-14
 Identities = 33/170 (19%), Positives = 47/170 (27%), Gaps = 40/170 (23%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPA 140
             L  AA  G V  V+ LL  GA+ N     G     + +  G   + E+LL  GA    
Sbjct: 14  DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM-GSARVAELLLLHGAEPNC 72

Query: 141 CEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINAT 200
            +            R                VH    A   GF+D +  L + G  ++  
Sbjct: 73  ADP-------ATLTR---------------PVHD---AAREGFLDTLVVLHRAGARLDVR 107

Query: 201 DRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLG 250
           D                   +  A       V + L  A   T       
Sbjct: 108 D-------------AWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHAR 144

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 70.6 bits (174), Expect = 2e-14
 Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 5/96 (5%)

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
               L  A   G    V  LL  GA+   P    +    PI +    G + + + L+  G
Sbjct: 12  SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRR---PIQVMMM-GSARVAELLLLHG 67

Query: 364 CDLNTKTESGET-ALMISAKYKQEECVKVLAKAGAD 398
            + N    +  T  +  +A+    + + VL +AGA 
Sbjct: 68  AEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGAR 103

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 61.7 bits (151), Expect = 2e-11
 Identities = 16/89 (17%), Positives = 24/89 (26%), Gaps = 11/89 (12%)

Query: 569 GVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAE 628
                       L  AA  G       L+  GA  +  N+ G   + +    S+      
Sbjct: 4   AAGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSA------ 57

Query: 629 LVILDEVARMLVLGGGHVLKHTKGGKGTP 657
                 VA +L+L G             P
Sbjct: 58  -----RVAELLLLHGAEPNCADPATLTRP 81

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 50.6 bits (122), Expect = 2e-07
 Identities = 31/167 (18%), Positives = 47/167 (28%), Gaps = 30/167 (17%)

Query: 214 TNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYA 273
                  L  A    +V  V+ LL+AGAN +     G                       
Sbjct: 9   MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYG----RR----------------P 48

Query: 274 ITWCAVEYFEITGSILRMLLQH-LSYNSP-HYGRTL-LHHAILCGCTGAVAVLLSCGADA 330
           I    +    +      +LL H    N       T  +H A   G    + VL   GA  
Sbjct: 49  IQVMMMGSARVA----ELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARL 104

Query: 331 QCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETAL 377
                  +    P+ LA  LG+  + + L  +         +   A 
Sbjct: 105 DVRDAWGRL---PVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAA 148

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 42.8 bits (102), Expect = 7e-05
 Identities = 8/48 (16%), Positives = 15/48 (31%), Gaps = 4/48 (8%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILE 129
             + LA   G+  + + L +                I   EG  +I +
Sbjct: 113 LPVDLAEELGHRDVARYLRAAAGGTRGSN----HARIDAAEGPSDIPD 156

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  103 bits (260), Expect = 2e-26
 Identities = 35/145 (24%), Positives = 49/145 (33%), Gaps = 34/145 (23%)

Query: 476 NGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFAL 535
                 M A   G ++  ++ V  G DV    + G+                        
Sbjct: 6   MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKP---------------------- 43

Query: 536 EKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCEL 595
                       LH AA  G L+ +  L  +G  +N PD    TPL+ A  EGH    +L
Sbjct: 44  ------------LHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKL 91

Query: 596 LISNGAVCDIKNARGETALSLARKN 620
           L+S GA   +K   G TA       
Sbjct: 92  LLSKGADKTVKGPDGLTAFEATDNQ 116

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 86.3 bits (215), Expect = 2e-20
 Identities = 28/144 (19%), Positives = 48/144 (33%), Gaps = 35/144 (24%)

Query: 446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKL 505
             M+  + GD+  +K  + + E +++   + G   +  AA  G +E+   L+  GAD+  
Sbjct: 10  EFMWALKNGDLDEVKDYVAKGE-DVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 68

Query: 506 LNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTS 565
            +K   T                                   L  A   G +  V+LL S
Sbjct: 69  PDKHHITP----------------------------------LLSAVYEGHVSCVKLLLS 94

Query: 566 RGYGVNVPDGDGYTPLMLAAREGH 589
           +G    V   DG T       +  
Sbjct: 95  KGADKTVKGPDGLTAFEATDNQAI 118

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 85.1 bits (212), Expect = 5e-20
 Identities = 23/83 (27%), Positives = 32/83 (38%)

Query: 538 GNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLI 597
           G   +        A + GDLD V+   ++G  VN     G  PL  AA  G   + E L+
Sbjct: 1   GPLGSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLL 60

Query: 598 SNGAVCDIKNARGETALSLARKN 620
             GA  +  +    T L  A   
Sbjct: 61  LKGADINAPDKHHITPLLSAVYE 83

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 74.7 bits (185), Expect = 3e-16
 Identities = 26/114 (22%), Positives = 43/114 (37%), Gaps = 3/114 (2%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
                   A+  G    V   ++ G D    +   +    P+H AA  G   I++ L+  
Sbjct: 6   MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRK---PLHYAADCGQLEILEFLLLK 62

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSN 416
           G D+N   +   T L+ +       CVK+L   GAD  +    G +A     + 
Sbjct: 63  GADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQ 116

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 65.9 bits (162), Expect = 4e-13
 Identities = 25/151 (16%), Positives = 46/151 (30%), Gaps = 40/151 (26%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
               A + G    V+  +  G D+N   E G   L  +A   Q E ++ L   GAD    
Sbjct: 10  EFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGAD---- 65

Query: 403 SVSGQSASSI-AGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKA 461
                    I A                               +PL+     G ++ +K 
Sbjct: 66  ---------INAPDKH---H----------------------ITPLLSAVYEGHVSCVKL 91

Query: 462 LIGREELNLDYQDDNGFSAVMVAASKGHVEV 492
           L+ +   +   +  +G +A     ++    +
Sbjct: 92  LLSK-GADKTVKGPDGLTAFEATDNQAIKAL 121

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 64.3 bits (158), Expect = 1e-12
 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 3/88 (3%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
            GR  LH+A  CG    +  LL  GAD   P +   T   P+  A   G+ + V+ L+  
Sbjct: 39  GGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHIT---PLLSAVYEGHVSCVKLLLSK 95

Query: 363 GCDLNTKTESGETALMISAKYKQEECVK 390
           G D   K   G TA   +     +  ++
Sbjct: 96  GADKTVKGPDGLTAFEATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 61.3 bits (150), Expect = 2e-11
 Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPA 140
                A  +G++  VK  ++ G DVN+ L  G      A   G LEILE LL  GA   A
Sbjct: 9   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 68

Query: 141 CEE----ALLEASCHGQARLAELLM 161
            ++     LL A   G     +LL+
Sbjct: 69  PDKHHITPLLSAVYEGHVSCVKLLL 93

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 57.8 bits (141), Expect = 2e-10
 Identities = 25/148 (16%), Positives = 48/148 (32%), Gaps = 38/148 (25%)

Query: 373 GETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRS 432
            +   M + K    + VK     G D         + +   G                  
Sbjct: 7   CDKEFMWALKNGDLDEVKDYVAKGEDV--------NRTLEGG------------------ 40

Query: 433 GNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEV 492
                        PL + A  G +  L+ L+ +   +++  D +  + ++ A  +GHV  
Sbjct: 41  -----------RKPLHYAADCGQLEILEFLLLKG-ADINAPDKHHITPLLSAVYEGHVSC 88

Query: 493 FRELVYAGADVKLLNKSGKTAIMLSELN 520
            + L+  GAD  +    G TA   ++  
Sbjct: 89  VKLLLSKGADKTVKGPDGLTAFEATDNQ 116

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 56.6 bits (138), Expect = 5e-10
 Identities = 22/84 (26%), Positives = 33/84 (39%), Gaps = 9/84 (10%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKAGASQ 138
             L  AA  G + +++ LL  GAD+N         T    AV EGH+  +++LL  GA +
Sbjct: 42  KPLHYAADCGQLEILEFLLLKGADINAPDKHHI--TPLLSAVYEGHVSCVKLLLSKGADK 99

Query: 139 PACEE----ALLEASCHGQARLAE 158
                    A           L +
Sbjct: 100 TVKGPDGLTAFEATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 45.9 bits (110), Expect = 3e-06
 Identities = 28/133 (21%), Positives = 47/133 (35%), Gaps = 47/133 (35%)

Query: 118 IAVREGHLEILEILLKAGASQPACEE----ALLEASCHGQARLAELLMGSDLIRPHVAVH 173
            A++ G L+ ++  +  G       E     L  A+  GQ                    
Sbjct: 13  WALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQ-------------------- 52

Query: 174 SLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVV 233
                     +++++ L+  G DINA D                 + L++AV    VS V
Sbjct: 53  ----------LEILEFLLLKGADINAPD-------------KHHITPLLSAVYEGHVSCV 89

Query: 234 QLLLQAGANTDMK 246
           +LLL  GA+  +K
Sbjct: 90  KLLLSKGADKTVK 102

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  102 bits (257), Expect = 4e-26
 Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 34/144 (23%)

Query: 471 DYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVM 530
            +   +G + +  AA  GH E  ++L+  GADV   +K G T                  
Sbjct: 3   MWGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTP----------------- 45

Query: 531 LEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHG 590
                            LH AA+ G  + V+LL ++G  VN    DG TP  LA + GH 
Sbjct: 46  -----------------LHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHH 88

Query: 591 PMCELLISNGAVCDIKNARGETAL 614
            + +LL + GA  + ++       
Sbjct: 89  EIVKLLDAKGADVNARSWGSSHHH 112

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 88.2 bits (220), Expect = 4e-21
 Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 11/115 (9%)

Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC 603
           G   LH AA+ G  + V+ L S+G  VN    DG TPL LAA+ GH  + +LL++ GA  
Sbjct: 9   GNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV 68

Query: 604 DIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPH 658
           + ++  G T   LA+KN             E+ ++L   G  V   + G     H
Sbjct: 69  NARSKDGNTPEHLAKKNGHH----------EIVKLLDAKGADVNARSWGSS-HHH 112

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 75.1 bits (186), Expect = 1e-16
 Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 3/96 (3%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
            G T LH+A   G    V  LLS GAD     +   T   P+HLAA+ G++ IV+ L+  
Sbjct: 8   DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNT---PLHLAAKNGHAEIVKLLLAK 64

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
           G D+N +++ G T   ++ K    E VK+L   GAD
Sbjct: 65  GADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGAD 100

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 70.9 bits (175), Expect = 4e-15
 Identities = 29/136 (21%), Positives = 50/136 (36%), Gaps = 35/136 (25%)

Query: 446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKL 505
           PL   A+ G    +K L+ +   +++ +  +G + + +AA  GH E+ + L+  GADV  
Sbjct: 12  PLHNAAKNGHAEEVKKLLSKGA-DVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA 70

Query: 506 LNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTS 565
            +K G T                                    H A + G  + V+LL +
Sbjct: 71  RSKDGNT----------------------------------PEHLAKKNGHHEIVKLLDA 96

Query: 566 RGYGVNVPDGDGYTPL 581
           +G  VN          
Sbjct: 97  KGADVNARSWGSSHHH 112

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 62.8 bits (154), Expect = 3e-12
 Identities = 29/89 (32%), Positives = 40/89 (44%), Gaps = 11/89 (12%)

Query: 569 GVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAE 628
           G      DG TPL  AA+ GH    + L+S GA  + ++  G T L LA KN        
Sbjct: 1   GHMWGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHA----- 55

Query: 629 LVILDEVARMLVLGGGHVLKHTKGGKGTP 657
                E+ ++L+  G  V   +K G  TP
Sbjct: 56  -----EIVKLLLAKGADVNARSKDGN-TP 78

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 58.2 bits (142), Expect = 1e-10
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 9/86 (10%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKAGASQ 138
           T L  AA +G+   VKKLLS GADVN +   G   T   +A + GH EI+++LL  GA  
Sbjct: 11  TPLHNAAKNGHAEEVKKLLSKGADVNARSKDGN--TPLHLAAKNGHAEIVKLLLAKGADV 68

Query: 139 PACEE----ALLEASCHGQARLAELL 160
            A  +        A  +G   + +LL
Sbjct: 69  NARSKDGNTPEHLAKKNGHHEIVKLL 94

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 57.8 bits (141), Expect = 2e-10
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 3/75 (4%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
            G T LH A   G    V +LL+ GAD     +   T   P HLA + G+  IV+ L   
Sbjct: 41  DGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNT---PEHLAKKNGHHEIVKLLDAK 97

Query: 363 GCDLNTKTESGETAL 377
           G D+N ++       
Sbjct: 98  GADVNARSWGSSHHH 112

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 55.8 bits (136), Expect = 1e-09
 Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 5/62 (8%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKA 134
           K   T L LAA +G+  +VK LL+ GADVN +   G   T   +A + GH EI+++L   
Sbjct: 40  KDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGN--TPEHLAKKNGHHEIVKLLDAK 97

Query: 135 GA 136
           GA
Sbjct: 98  GA 99

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 52.8 bits (128), Expect = 1e-08
 Identities = 30/151 (19%), Positives = 49/151 (32%), Gaps = 40/151 (26%)

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGF 422
           G    +K   G T L  +AK    E VK L   GAD                        
Sbjct: 1   GHMWGSK--DGNTPLHNAAKNGHAEEVKKLLSKGAD------------------------ 34

Query: 423 QRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVM 482
                          + +    +PL   A+ G    +K L+ +   +++ +  +G +   
Sbjct: 35  -------------VNARSKDGNTPLHLAAKNGHAEIVKLLLAK-GADVNARSKDGNTPEH 80

Query: 483 VAASKGHVEVFRELVYAGADVKLLNKSGKTA 513
           +A   GH E+ + L   GADV   +      
Sbjct: 81  LAKKNGHHEIVKLLDAKGADVNARSWGSSHH 111

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 43.1 bits (103), Expect = 3e-05
 Identities = 30/147 (20%), Positives = 46/147 (31%), Gaps = 46/147 (31%)

Query: 103 GADVNQKLFRGFATT---IAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAEL 159
           G     K   G   T    A + GH E ++ LL  GA        +   S  G   L   
Sbjct: 1   GHMWGSK--DGN--TPLHNAAKNGHAEEVKKLLSKGAD-------VNARSKDGNTPL--- 46

Query: 160 LMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCS 219
                    H+A          G  ++V  L+  G D+NA                   +
Sbjct: 47  ---------HLA-------AKNGHAEIVKLLLAKGADVNARS-------------KDGNT 77

Query: 220 ALVAAVVSRQVSVVQLLLQAGANTDMK 246
               A  +    +V+LL   GA+ + +
Sbjct: 78  PEHLAKKNGHHEIVKLLDAKGADVNAR 104

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  106 bits (267), Expect = 5e-26
 Identities = 39/285 (13%), Positives = 75/285 (26%), Gaps = 70/285 (24%)

Query: 343 PIHLAARLGYSTIVQSLIDS--------GCDLNTKTESGETALMISA---KYKQEECVKV 391
            +      G    +  L++              T+  +G+T LM +    +     C+  
Sbjct: 5   RLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMP 64

Query: 392 LAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVA 451
           L +   D G       +  +       S                           L    
Sbjct: 65  LLQIDKDSGNPKPLVNAQCTDEFYQGHS--------------------------ALHIAI 98

Query: 452 QAGDIAALKALI------------GREELNLDYQDDNGFSAVMVAASKGHVEVFRELV-- 497
           +   +  +K L+               + +       G   + +AA     +V   L+  
Sbjct: 99  EKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLEN 158

Query: 498 -YAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGD 556
            +  A ++  +  G T                  L   +   + N+    AL      G 
Sbjct: 159 PHQPASLEATDSLGNTV-----------------LHALVMIAD-NSPENSALVIHMYDGL 200

Query: 557 LDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGA 601
           L     L        + +  G TPL LAA+EG   +   ++    
Sbjct: 201 LQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREF 245

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 92.2 bits (229), Expect = 5e-21
 Identities = 44/217 (20%), Positives = 67/217 (30%), Gaps = 44/217 (20%)

Query: 484 AASKGHVEVFRELV--------YAGADVKLLNKSGKTAIMLSELNQNCDLFE--KVMLEF 533
             S+G  E    L+        Y          +GKT +M + LN    +      +L+ 
Sbjct: 9   VVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQI 68

Query: 534 ALEKGN-----------RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPD-------- 574
             + GN               G  ALH A  +  L  V+LL   G  V++          
Sbjct: 69  DKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKH 128

Query: 575 -----GDGYTPLMLAAREGHGPMCELLISNGAVC---DIKNARGETALSLA-RKNSSMKN 625
                  G  PL LAA      +   L+ N       +  ++ G T L        +   
Sbjct: 129 QGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPE 188

Query: 626 DAELVI-----LDEVARMLVLGGGHVLKHTKGGKGTP 657
           ++ LVI     L ++   L             G  TP
Sbjct: 189 NSALVIHMYDGLLQMGARLCPTVQLEEISNHQGL-TP 224

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 85.6 bits (212), Expect = 1e-18
 Identities = 47/256 (18%), Positives = 84/256 (32%), Gaps = 67/256 (26%)

Query: 289 LRMLLQHLSYNSPH----------YGRTLLHHAILC---GCTGAVAVLLSCGADAQCPIR 335
           L  LL++L +NS +           G+T L  A+L    G    +  LL    D+  P  
Sbjct: 18  LTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKP 77

Query: 336 TQKTE--------FHPIHLAARLGYSTIVQSLIDSGCDLNTKTES-------------GE 374
               +           +H+A        V+ L+++G D++ +                GE
Sbjct: 78  LVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGE 137

Query: 375 TALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDII-RSG 433
             L ++A  KQ + V  L +                            Q A L+     G
Sbjct: 138 LPLSLAACTKQWDVVTYLLENPH-------------------------QPASLEATDSLG 172

Query: 434 NIP------KSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASK 487
           N         + N    S L+     G +     L    +   +  +  G + + +AA +
Sbjct: 173 NTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQ-LEEISNHQGLTPLKLAAKE 231

Query: 488 GHVEVFRELVYAGADV 503
           G +E+FR ++      
Sbjct: 232 GKIEIFRHILQREFSG 247

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 75.2 bits (185), Expect = 4e-15
 Identities = 46/307 (14%), Positives = 79/307 (25%), Gaps = 75/307 (24%)

Query: 80  DVTALFLAAHSGNVTLVKKLL----STGADVNQKLFRGFAT--------TIAVREGHLEI 127
           D   LF     G    +  LL         +    +   +T         + +++G    
Sbjct: 2   DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNAC 61

Query: 128 LEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVV 187
           +  LL+         + L+ A C       E   G      H A+H    A  +  +  V
Sbjct: 62  IMPLLQIDK-DSGNPKPLVNAQCT-----DEFYQG------HSALHI---AIEKRSLQCV 106

Query: 188 DTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAG---ANTD 244
             L++ G D++                      L  A  ++Q  VV  LL+     A+ +
Sbjct: 107 KLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLE 166

Query: 245 MKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHL--SYNSPH 302
               LG                                         +L H         
Sbjct: 167 ATDSLG---------------------------------------NTVL-HALVMIADNS 186

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
              + L   +  G     A L       +       T   P+ LAA+ G   I + ++  
Sbjct: 187 PENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLT---PLKLAAKEGKIEIFRHILQR 243

Query: 363 GCDLNTK 369
                  
Sbjct: 244 EFSGAAA 250

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 72.1 bits (177), Expect = 4e-14
 Identities = 43/290 (14%), Positives = 78/290 (26%), Gaps = 62/290 (21%)

Query: 119 AVREGHLEILEILLKAGASQPACEEA-LLEASCHGQARLAELLMGSDLIRPHVAVHSLVT 177
            V  G  E L  LL+                   G+  L              AV +   
Sbjct: 9   VVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCL------------MKAVLN--- 53

Query: 178 ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL 237
               G    +  L++   D      L+              SAL  A+  R +  V+LL+
Sbjct: 54  -LQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDE--FYQGHSALHIAIEKRSLQCVKLLV 110

Query: 238 QAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAIT--WCAVEYFEITGS--ILRMLL 293
           + GA+  ++            G  F+   G    +       A           ++  LL
Sbjct: 111 ENGADVHLR----------ACGRFFQKHQGTCFYFGELPLSLAACT----KQWDVVTYLL 156

Query: 294 QHLSYNSP-----HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAA 348
           ++    +        G T+LH  ++                          E   + +  
Sbjct: 157 ENPHQPASLEATDSLGNTVLHALVMIADN--------------------SPENSALVIHM 196

Query: 349 RLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
             G   +   L  +          G T L ++AK  + E  + + +    
Sbjct: 197 YDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFS 246

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 66.0 bits (161), Expect = 5e-12
 Identities = 35/184 (19%), Positives = 63/184 (34%), Gaps = 34/184 (18%)

Query: 75  EEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT--------------IAV 120
           +EF    +AL +A    ++  VK L+  GADV+ +    F                 +A 
Sbjct: 85  DEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAA 144

Query: 121 REGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACC 180
                +++  LL+    QPA  EA       G   L  L+M +D    + A   LV    
Sbjct: 145 CTKQWDVVTYLLENPH-QPASLEA---TDSLGNTVLHALVMIADNSPENSA---LVIHMY 197

Query: 181 RGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAG 240
            G + +   L         ++             +   + L  A    ++ + + +LQ  
Sbjct: 198 DGLLQMGARLCPTVQLEEISN-------------HQGLTPLKLAAKEGKIEIFRHILQRE 244

Query: 241 ANTD 244
            +  
Sbjct: 245 FSGA 248

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 46.3 bits (110), Expect = 1e-05
 Identities = 26/142 (18%), Positives = 42/142 (29%), Gaps = 32/142 (22%)

Query: 547 ALHCAARRGDLDAVR-----LLTSRGYG---VNVPDGDGYTPLMLAA---REGHGPMCEL 595
            L     RG  + +      L  +  Y           G T LM A    ++G       
Sbjct: 5   RLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMP 64

Query: 596 LISNG-----------AVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGG 644
           L+              A C  +  +G +AL +A +  S+          +  ++LV  G 
Sbjct: 65  LLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSL----------QCVKLLVENGA 114

Query: 645 HVLKHTKGGKGTPHRKDIRMLG 666
            V     G     H+      G
Sbjct: 115 DVHLRACGRFFQKHQGTCFYFG 136

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  102 bits (257), Expect = 5e-26
 Identities = 56/170 (32%), Positives = 79/170 (46%), Gaps = 44/170 (25%)

Query: 476 NGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFAL 535
           NG + + +AA  GH+EV + L+ AGADV   +K+G+T                       
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTP---------------------- 38

Query: 536 EKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCEL 595
                       LH AAR G L+ V+LL   G  VN  D +G TPL LAAR GH  + +L
Sbjct: 39  ------------LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKL 86

Query: 596 LISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGH 645
           L+  GA  + K+  G T L LA +N  +          EV ++L+  G +
Sbjct: 87  LLEAGADVNAKDKNGRTPLHLAARNGHL----------EVVKLLLEAGAY 126

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 99.0 bits (248), Expect = 8e-25
 Identities = 52/156 (33%), Positives = 75/156 (48%), Gaps = 35/156 (22%)

Query: 446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKL 505
           PL   A+ G +  +K L+     +++ +D NG + + +AA  GH+EV + L+ AGADV  
Sbjct: 5   PLHLAARNGHLEVVKLLLEAGA-DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63

Query: 506 LNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTS 565
            +K+G+T                                   LH AAR G L+ V+LL  
Sbjct: 64  KDKNGRT----------------------------------PLHLAARNGHLEVVKLLLE 89

Query: 566 RGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGA 601
            G  VN  D +G TPL LAAR GH  + +LL+  GA
Sbjct: 90  AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 85.5 bits (213), Expect = 5e-20
 Identities = 45/114 (39%), Positives = 59/114 (51%), Gaps = 11/114 (9%)

Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC 603
           G   LH AAR G L+ V+LL   G  VN  D +G TPL LAAR GH  + +LL+  GA  
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61

Query: 604 DIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTP 657
           + K+  G T L LA +N  +          EV ++L+  G  V    K G+ TP
Sbjct: 62  NAKDKNGRTPLHLAARNGHL----------EVVKLLLEAGADVNAKDKNGR-TP 104

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 75.1 bits (186), Expect = 2e-16
 Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 3/95 (3%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
            GRT LH A   G    V +LL  GAD     +  +T   P+HLAAR G+  +V+ L+++
Sbjct: 34  NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRT---PLHLAARNGHLEVVKLLLEA 90

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGA 397
           G D+N K ++G T L ++A+    E VK+L +AGA
Sbjct: 91  GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 74.3 bits (184), Expect = 3e-16
 Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 3/95 (3%)

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
           GRT LH A   G    V +LL  GAD     +  +T   P+HLAAR G+  +V+ L+++G
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRT---PLHLAARNGHLEVVKLLLEAG 58

Query: 364 CDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
            D+N K ++G T L ++A+    E VK+L +AGAD
Sbjct: 59  ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 93

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 70.8 bits (175), Expect = 6e-15
 Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 38/159 (23%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
           P+HLAAR G+  +V+ L+++G D+N K ++G T L ++A+    E VK+L +AGAD    
Sbjct: 5   PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAK 64

Query: 403 SVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKAL 462
             +G+                                     +PL   A+ G +  +K L
Sbjct: 65  DKNGR-------------------------------------TPLHLAARNGHLEVVKLL 87

Query: 463 IGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGA 501
           +     +++ +D NG + + +AA  GH+EV + L+ AGA
Sbjct: 88  LEAGA-DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 63.5 bits (156), Expect = 3e-12
 Identities = 48/196 (24%), Positives = 76/196 (38%), Gaps = 72/196 (36%)

Query: 372 SGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIR 431
           +G T L ++A+    E VK+L +AGAD      +G+                        
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGR------------------------ 36

Query: 432 SGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVE 491
                        +PL   A+ G +  +K L+     +++ +D NG + + +AA  GH+E
Sbjct: 37  -------------TPLHLAARNGHLEVVKLLLEAGA-DVNAKDKNGRTPLHLAARNGHLE 82

Query: 492 VFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCA 551
           V + L+ AGADV   +K+G+T                                   LH A
Sbjct: 83  VVKLLLEAGADVNAKDKNGRT----------------------------------PLHLA 108

Query: 552 ARRGDLDAVRLLTSRG 567
           AR G L+ V+LL   G
Sbjct: 109 ARNGHLEVVKLLLEAG 124

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 62.7 bits (154), Expect = 4e-12
 Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 52/167 (31%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKAGASQ 138
           T L LAA +G++ +VK LL  GADVN K   G   T   +A R GHLE++++LL+AGA  
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGR--TPLHLAARNGHLEVVKLLLEAGADV 61

Query: 139 PACEE----ALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCG 194
            A ++     L  A+ +G                               ++VV  L++ G
Sbjct: 62  NAKDKNGRTPLHLAARNGH------------------------------LEVVKLLLEAG 91

Query: 195 VDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGA 241
            D+NA D                 + L  A  +  + VV+LLL+AGA
Sbjct: 92  ADVNAKD-------------KNGRTPLHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 58.9 bits (144), Expect = 9e-11
 Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 9/90 (10%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKA 134
           K+  T L LAA +G++ +VK LL  GADVN K   G   T   +A R GHLE++++LL+A
Sbjct: 33  KNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGR--TPLHLAARNGHLEVVKLLLEA 90

Query: 135 GASQPACEE----ALLEASCHGQARLAELL 160
           GA   A ++     L  A+ +G   + +LL
Sbjct: 91  GADVNAKDKNGRTPLHLAARNGHLEVVKLL 120

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 55.0 bits (134), Expect = 2e-09
 Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 5/62 (8%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKA 134
           K+  T L LAA +G++ +VK LL  GADVN K   G   T   +A R GHLE++++LL+A
Sbjct: 66  KNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGR--TPLHLAARNGHLEVVKLLLEA 123

Query: 135 GA 136
           GA
Sbjct: 124 GA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 45.0 bits (108), Expect = 6e-06
 Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 47/133 (35%)

Query: 118 IAVREGHLEILEILLKAGASQPACEE----ALLEASCHGQARLAELLMGSDLIRPHVAVH 173
           +A R GHLE++++LL+AGA   A ++     L  A+ +G                     
Sbjct: 8   LAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH-------------------- 47

Query: 174 SLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVV 233
                     ++VV  L++ G D+NA D                 + L  A  +  + VV
Sbjct: 48  ----------LEVVKLLLEAGADVNAKD-------------KNGRTPLHLAARNGHLEVV 84

Query: 234 QLLLQAGANTDMK 246
           +LLL+AGA+ + K
Sbjct: 85  KLLLEAGADVNAK 97

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  102 bits (258), Expect = 9e-26
 Identities = 38/150 (25%), Positives = 58/150 (38%), Gaps = 12/150 (8%)

Query: 476 NGFSAVMVAASKGHVEVFRELVYAGADV-KLLNKSGKTAIMLSELNQNCDLFEKVMLEFA 534
           +    ++ AA  G  +  R L+  GA      +  G + + L+    +         E  
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFTT--DWLGTSPLHLAAQYGHFS-----TTEVL 53

Query: 535 LEKG-NRNA---GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHG 590
           L  G +R+A        LH AA  G  + V +L   G  VN  D    T L  A    H 
Sbjct: 54  LRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQ 113

Query: 591 PMCELLISNGAVCDIKNARGETALSLARKN 620
            + ELLI  GA    ++   +TA  ++  N
Sbjct: 114 EVVELLIKYGADVHTQSKFCKTAFDISIDN 143

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 88.6 bits (221), Expect = 7e-21
 Identities = 35/156 (22%), Positives = 59/156 (37%), Gaps = 13/156 (8%)

Query: 446 PLMFVAQAGDIAALKALIGRE-ELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVK 504
            L+  A+AG    ++ L+           D  G S + +AA  GH      L+ AG    
Sbjct: 5   KLLEAARAGQDDEVRILMANGAPFT---TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD 61

Query: 505 LLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG-NRNAG---GFYALHCAARRGDLDAV 560
              K  +T + ++    +       ++E  L+ G + NA       ALH A      + V
Sbjct: 62  ARTKVDRTPLHMAASEGH-----ANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVV 116

Query: 561 RLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELL 596
            LL   G  V+       T   ++   G+  + E+L
Sbjct: 117 ELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 77.0 bits (191), Expect = 1e-16
 Identities = 33/189 (17%), Positives = 63/189 (33%), Gaps = 42/189 (22%)

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
               L  A   G    V +L++ GA       T      P+HLAA+ G+ +  + L+ +G
Sbjct: 2   LGKKLLEAARAGQDDEVRILMANGAP----FTTDWLGTSPLHLAAQYGHFSTTEVLLRAG 57

Query: 364 CDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQ 423
              + +T+   T L ++A       V+VL K GAD     +                   
Sbjct: 58  VSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKM---------------- 101

Query: 424 RAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMV 483
                                + L +  +      ++ LI     ++  Q     +A  +
Sbjct: 102 ---------------------TALHWATEHNHQEVVELLIKY-GADVHTQSKFCKTAFDI 139

Query: 484 AASKGHVEV 492
           +   G+ ++
Sbjct: 140 SIDNGNEDL 148

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 75.1 bits (186), Expect = 4e-16
 Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 3/96 (3%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
            G + LH A   G      VLL  G       +  +T   P+H+AA  G++ IV+ L+  
Sbjct: 33  LGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRT---PLHMAASEGHANIVEVLLKH 89

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
           G D+N K     TAL  + ++  +E V++L K GAD
Sbjct: 90  GADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD 125

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 72.0 bits (178), Expect = 5e-15
 Identities = 38/221 (17%), Positives = 65/221 (29%), Gaps = 73/221 (33%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
            +  AAR G    V+ L+ +G         G + L ++A+Y      +VL +AG      
Sbjct: 5   KLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63

Query: 403 SVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKAL 462
           +   +                                     +PL   A  G    ++ L
Sbjct: 64  TKVDR-------------------------------------TPLHMAASEGHANIVEVL 86

Query: 463 IGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQN 522
           +     +++ +D    +A+  A    H EV   L+  GADV   +K  KT          
Sbjct: 87  LKH-GADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKT---------- 135

Query: 523 CDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLL 563
                                   A   +   G+ D   +L
Sbjct: 136 ------------------------AFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 69.7 bits (172), Expect = 3e-14
 Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 3/90 (3%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
             RT LH A   G    V VLL  GAD       + T    +H A    +  +V+ LI  
Sbjct: 66  VDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMT---ALHWATEHNHQEVVELLIKY 122

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVL 392
           G D++T+++  +TA  IS     E+  ++L
Sbjct: 123 GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 66.6 bits (164), Expect = 4e-13
 Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 21/134 (15%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPAC 141
             L  AA +G    V+ L++ GA             +A + GH    E+LL+AG S+ A 
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63

Query: 142 EE----ALLEASCHGQARLAELLM--GSDLIRPHVAVHS--------LVTACCRGFVDVV 187
            +     L  A+  G A + E+L+  G+D       V++        L  A      +VV
Sbjct: 64  TKVDRTPLHMAASEGHANIVEVLLKHGAD-------VNAKDMLKMTALHWATEHNHQEVV 116

Query: 188 DTLMKCGVDINATD 201
           + L+K G D++   
Sbjct: 117 ELLIKYGADVHTQS 130

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 57.0 bits (139), Expect = 7e-10
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 9/90 (10%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKA 134
           K D T L +AA  G+  +V+ LL  GADVN K       T    A    H E++E+L+K 
Sbjct: 65  KVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKM--TALHWATEHNHQEVVELLIKY 122

Query: 135 GASQPACEE----ALLEASCHGQARLAELL 160
           GA      +    A   +  +G   LAE+L
Sbjct: 123 GADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 40.8 bits (97), Expect = 3e-04
 Identities = 26/129 (20%), Positives = 43/129 (33%), Gaps = 40/129 (31%)

Query: 118 IAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVT 177
            A R G  + + IL+  GA               G + L            H+A      
Sbjct: 8   EAARAGQDDEVRILMANGAP--------FTTDWLGTSPL------------HLAAQ---- 43

Query: 178 ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL 237
               G     + L++ GV  +A                VD + L  A      ++V++LL
Sbjct: 44  ---YGHFSTTEVLLRAGVSRDART-------------KVDRTPLHMAASEGHANIVEVLL 87

Query: 238 QAGANTDMK 246
           + GA+ + K
Sbjct: 88  KHGADVNAK 96

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  103 bits (260), Expect = 1e-25
 Identities = 27/186 (14%), Positives = 55/186 (29%), Gaps = 17/186 (9%)

Query: 438 SSNVAVFSPLMFVAQAGDIAALKALI--GREELNLDYQDDNGFSAVMVAASKGHVEVFRE 495
           S+ ++ +  +   A  G       L   G E+     + +  +  +     +   ++   
Sbjct: 1   SNAMSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMF 60

Query: 496 LVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKV-MLEFALEKG---N-RNAGGFYALHC 550
           L+  GAD+K   K G T           D+     + +  LEKG             +  
Sbjct: 61  LINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFK 120

Query: 551 AARRGDLDAVR-------LLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC 603
                 +D          + +  G  + + D  G T L    R       +++       
Sbjct: 121 NIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIK-- 178

Query: 604 DIKNAR 609
              N +
Sbjct: 179 KY-NLK 183

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  102 bits (256), Expect = 3e-25
 Identities = 31/162 (19%), Positives = 50/162 (30%), Gaps = 19/162 (11%)

Query: 476 NGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFAL 535
           + +  V  AA  G  E F EL   G + K      K+ I+   L  N D     +  F +
Sbjct: 5   SEYRTVSAAAMLGTYEDFLELFEKGYEDKESV--LKSNILYDVLRNNNDEARYKISMFLI 62

Query: 536 EKG----NRNAGGFYALHCAARRGDLDA------VRLLTSRGYGVNVPDGDGYTPLMLAA 585
            KG    +R   G        + G  D        ++   +G  +          +    
Sbjct: 63  NKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNI 122

Query: 586 REGHGPMCE-------LLISNGAVCDIKNARGETALSLARKN 620
                   E       +   +G    IK+  G TAL   ++ 
Sbjct: 123 FNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRC 164

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 86.3 bits (214), Expect = 1e-19
 Identities = 26/212 (12%), Positives = 57/212 (26%), Gaps = 37/212 (17%)

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
               +  A + G       L   G + +  +      +  +          I   LI+ G
Sbjct: 6   EYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKG 65

Query: 364 CDLNTKTESGETALMISAKY------KQEECVKVLAKAGADFGLVSVSGQSASSIAGSNW 417
            D+ ++T+ G T      +          E  K+  + GAD   +    +          
Sbjct: 66  ADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKN---- 121

Query: 418 WSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNG 477
                       I +  + ++  + ++               K +  +  L L  +D  G
Sbjct: 122 ------------IFNYFVDENEMIPLY---------------KLIFSQSGLQLLIKDKWG 154

Query: 478 FSAVMVAASKGHVEVFRELVYAGADVKLLNKS 509
            +A+            + +        L   S
Sbjct: 155 LTALEFVKRCQKPIALKMMEDYIKKYNLKENS 186

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 76.6 bits (189), Expect = 2e-16
 Identities = 27/254 (10%), Positives = 53/254 (20%), Gaps = 86/254 (33%)

Query: 338 KTEFHPIHLAARLGYSTIVQSLIDSGCDLNT---KTESGETALMISAKYKQEECVKVLAK 394
            +E+  +  AA LG       L + G +      K+      L  +    + +    L  
Sbjct: 4   MSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLIN 63

Query: 395 AGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAG 454
            GAD    +  G                                      +    + Q G
Sbjct: 64  KGADIKSRTKEGT-------------------------------------TLFFPLFQGG 86

Query: 455 DIAALKALIGREEL-----NLDYQDDNGFSAVMVAASKGHVEVFRE-------LVYAGAD 502
                      +       ++          V        V+              +G  
Sbjct: 87  GNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ 146

Query: 503 VKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRL 562
           + + +K G T                                  AL    R     A+++
Sbjct: 147 LLIKDKWGLT----------------------------------ALEFVKRCQKPIALKM 172

Query: 563 LTSRGYGVNVPDGD 576
           +       N+ +  
Sbjct: 173 MEDYIKKYNLKENS 186

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 70.1 bits (172), Expect = 5e-14
 Identities = 27/195 (13%), Positives = 47/195 (24%), Gaps = 38/195 (19%)

Query: 219 SALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCA 278
             + AA +         L + G   + K  +      +                 +    
Sbjct: 8   RTVSAAAMLGTYEDFLELFEKGY--EDKESVLK----SNILY-----------DVLRNNN 50

Query: 279 VEYFEITGSILRMLLQH-LSYNSP-HYGRTLLHHAILCGCTGAVA------VLLSCGADA 330
            E       I   L+       S    G TL       G            + L  GAD 
Sbjct: 51  DEARY---KISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADI 107

Query: 331 QCPIRTQKTEFHPIHLAARLGYSTIVQS-------LIDSGCDLNTKTESGETALMISAKY 383
               +  K     +       +    +           SG  L  K + G TAL    + 
Sbjct: 108 TALYKPYKI---VVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRC 164

Query: 384 KQEECVKVLAKAGAD 398
           ++   +K++      
Sbjct: 165 QKPIALKMMEDYIKK 179

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 63.9 bits (156), Expect = 7e-12
 Identities = 23/200 (11%), Positives = 54/200 (27%), Gaps = 51/200 (25%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRG----FATTIAVREGHLEILEILLK 133
            S+   +  AA  G      +L   G +  + + +             E   +I   L+ 
Sbjct: 4   MSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLIN 63

Query: 134 AGASQPACEE----ALLEASCHGQ------ARLAELLM--GSDLIRPHVAVHS------- 174
            GA   +  +            G         L ++ +  G+D       + +       
Sbjct: 64  KGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD-------ITALYKPYKI 116

Query: 175 -LVTACCRGFVDVVDT-------LMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVV 226
            +       FVD  +          + G+ +   D                 +AL     
Sbjct: 117 VVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKD-------------KWGLTALEFVKR 163

Query: 227 SRQVSVVQLLLQAGANTDMK 246
            ++   ++++       ++K
Sbjct: 164 CQKPIALKMMEDYIKKYNLK 183

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 60.1 bits (146), Expect = 2e-10
 Identities = 21/210 (10%), Positives = 49/210 (23%), Gaps = 43/210 (20%)

Query: 174 SLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVV 233
           ++  A   G  +    L + G +   +           L+       L       +  + 
Sbjct: 9   TVSAAAMLGTYEDFLELFEKGYEDKESV-----LKSNILYD-----VLRNNNDEARYKIS 58

Query: 234 QLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEP--YAITWCAVEYFEITGSILRM 291
             L+  GA+   + + G     T                         +    T  + ++
Sbjct: 59  MFLINKGADIKSRTKEG----TT--------------LFFPLFQGGGNDITGTT-ELCKI 99

Query: 292 LLQH-LSYNSP-HYGRTLLHHAILCGCTGAV-------AVLLSCGADAQCPIRTQKTEFH 342
            L+      +     + ++   I                +    G       +   T   
Sbjct: 100 FLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLT--- 156

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTES 372
            +    R      ++ + D     N K  S
Sbjct: 157 ALEFVKRCQKPIALKMMEDYIKKYNLKENS 186

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 56.6 bits (137), Expect = 2e-09
 Identities = 16/141 (11%), Positives = 37/141 (26%), Gaps = 21/141 (14%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGH------LEILEILLKA 134
             L          +   L++ GAD+  +   G        + G        E+ +I L+ 
Sbjct: 44  DVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEK 103

Query: 135 GASQPACEE----ALLEASCHGQARLAELLMGSD--LIRPHVAVHS--------LVTACC 180
           GA   A  +     + +   +      E++        +  + +          L     
Sbjct: 104 GADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKR 163

Query: 181 RGFVDVVDTLMKCGVDINATD 201
                 +  +       N  +
Sbjct: 164 CQKPIALKMMEDYIKKYNLKE 184

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  100 bits (251), Expect = 8e-25
 Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 11/157 (7%)

Query: 446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKL 505
            L   A  GD+  ++ L+ RE ++ D  +  G +A+ V    G   +  EL+  GA   +
Sbjct: 5   RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNV 63

Query: 506 LNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG-NRNAG---GFYALHCAARRGDLDAVR 561
            + SG + +  +      D      L+  +E G + N     G   +H A + G    V 
Sbjct: 64  QDTSGTSPVHDAARTGFLD-----TLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVS 118

Query: 562 LLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLIS 598
            L +    ++  D  G TPL LA + G   + ++L  
Sbjct: 119 FLAA-ESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 92.1 bits (230), Expect = 6e-22
 Identities = 32/155 (20%), Positives = 52/155 (33%), Gaps = 40/155 (25%)

Query: 477 GFSAVMVAASKGHVEVFRELVYA-GADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFAL 535
               +  AA++G V+  R L++        LN+ GKT                       
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKT----------------------- 38

Query: 536 EKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCEL 595
                      AL      G       L  +G   NV D  G +P+  AAR G     ++
Sbjct: 39  -----------ALQVMM-FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKV 86

Query: 596 LISNGAVCDIKNARGETALSLARKNSSMKNDAELV 630
           L+ +GA  ++ +  G   + LA      +    +V
Sbjct: 87  LVEHGADVNVPDGTGALPIHLA----VQEGHTAVV 117

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 79.0 bits (196), Expect = 2e-17
 Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 12/98 (12%)

Query: 544 GFYALHCAARRGDLDAVR-LLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV 602
               L  AA RGD+  VR LL       +  +  G T L +    G   +   L+  GA 
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGAS 60

Query: 603 CDIKNARGETALSLARKNSSMKNDAELVILDEVARMLV 640
            ++++  G + +  A +   +          +  ++LV
Sbjct: 61  PNVQDTSGTSPVHDAARTGFL----------DTLKVLV 88

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 76.3 bits (189), Expect = 2e-16
 Identities = 36/195 (18%), Positives = 60/195 (30%), Gaps = 44/195 (22%)

Query: 304 GRTLLHHAILCGCTGAVAVLL-SCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
               L  A   G    V  LL           R  KT    + +    G + I   L+  
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKT---ALQVMMF-GSTAIALELLKQ 57

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGF 422
           G   N +  SG + +  +A+    + +KVL + GAD  +   +G                
Sbjct: 58  GASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTG---------------- 101

Query: 423 QRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVM 482
                                  P+    Q G  A +  L    E +L  +D  G + + 
Sbjct: 102 ---------------------ALPIHLAVQEGHTAVVSFLA--AESDLHRRDARGLTPLE 138

Query: 483 VAASKGHVEVFRELV 497
           +A  +G  ++   L 
Sbjct: 139 LALQRGAQDLVDILQ 153

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 67.1 bits (165), Expect = 3e-13
 Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
            G + +H A   G    + VL+  GAD   P  T      PIHLA + G++ +V  L  +
Sbjct: 67  SGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGAL---PIHLAVQEGHTAVVSFLA-A 122

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVL 392
             DL+ +   G T L ++ +   ++ V +L
Sbjct: 123 ESDLHRRDARGLTPLELALQRGAQDLVDIL 152

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 66.7 bits (164), Expect = 4e-13
 Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 5/96 (5%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
           +G+T L   +  G T     LL  GA       +  +   P+H AAR G+   ++ L++ 
Sbjct: 35  FGKTALQVMM-FGSTAIALELLKQGASPNVQDTSGTS---PVHDAARTGFLDTLKVLVEH 90

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
           G D+N    +G   + ++ +      V  LA   +D
Sbjct: 91  GADVNVPDGTGALPIHLAVQEGHTAVVSFLAA-ESD 125

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 60.9 bits (149), Expect = 4e-11
 Identities = 34/166 (20%), Positives = 51/166 (30%), Gaps = 41/166 (24%)

Query: 82  TALFLAAHSGNVTLVKKLL-STGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPA 140
             L  AA  G+V  V++LL       +     G      +  G   I   LLK GAS   
Sbjct: 4   DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNV 63

Query: 141 CEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINAT 200
            +         G +                 VH    A   GF+D +  L++ G D+N  
Sbjct: 64  QDT-------SGTS----------------PVHD---AARTGFLDTLKVLVEHGADVNVP 97

Query: 201 DRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMK 246
           D                   +  AV     +VV  L    ++   +
Sbjct: 98  D-------------GTGALPIHLAVQEGHTAVVSFLAA-ESDLHRR 129

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 58.6 bits (143), Expect = 2e-10
 Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 10/90 (11%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKA 134
           +   TAL +    G+  +  +LL  GA  N +   G   +    A R G L+ L++L++ 
Sbjct: 34  RFGKTALQVMMF-GSTAIALELLKQGASPNVQDTSGT--SPVHDAARTGFLDTLKVLVEH 90

Query: 135 GASQPACEE----ALLEASCHGQARLAELL 160
           GA     +      +  A   G   +   L
Sbjct: 91  GADVNVPDGTGALPIHLAVQEGHTAVVSFL 120

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 54.0 bits (131), Expect = 1e-08
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 10/86 (11%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKAGASQ 138
           + +  AA +G +  +K L+  GADVN     G       +AV+EGH  ++  L    +  
Sbjct: 70  SPVHDAARTGFLDTLKVLVEHGADVNVPDGTGA--LPIHLAVQEGHTAVVSFLAA-ESDL 126

Query: 139 PACEE----ALLEASCHGQARLAELL 160
              +      L  A   G   L ++L
Sbjct: 127 HRRDARGLTPLELALQRGAQDLVDIL 152

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 48.9 bits (118), Expect = 5e-07
 Identities = 18/82 (21%), Positives = 25/82 (30%), Gaps = 13/82 (15%)

Query: 577 GYTPLMLAAREGHGP-MCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEV 635
               L  AA  G    +  LL       D  N  G+TAL +    S+            +
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGST-----------AI 50

Query: 636 ARMLVLGGGHVLKHTKGGKGTP 657
           A  L+  G         G  +P
Sbjct: 51  ALELLKQGASPNVQDTSGT-SP 71

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 41.6 bits (99), Expect = 2e-04
 Identities = 38/194 (19%), Positives = 64/194 (32%), Gaps = 52/194 (26%)

Query: 175 LVTACCRGFVDVVDTLM-KCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVV 233
           L  A  RG V  V  L+ +  V  +A +                 +AL   +     ++ 
Sbjct: 6   LSGAAARGDVQEVRRLLHRELVHPDALN-------------RFGKTALQVMM-FGSTAIA 51

Query: 234 QLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAIT--WCAVEYFEITGS--IL 289
             LL+ GA+ +++   G                        +    A       G    L
Sbjct: 52  LELLKQGASPNVQDTSG-----------------------TSPVHDAART----GFLDTL 84

Query: 290 RMLLQH-LSYNSP-HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLA 347
           ++L++H    N P   G   +H A+  G T  V+ L +  +D         T   P+ LA
Sbjct: 85  KVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA-ESDLHRRDARGLT---PLELA 140

Query: 348 ARLGYSTIVQSLID 361
            + G   +V  L  
Sbjct: 141 LQRGAQDLVDILQG 154

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  100 bits (250), Expect = 7e-24
 Identities = 35/162 (21%), Positives = 48/162 (29%), Gaps = 38/162 (23%)

Query: 471 DYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVM 530
                N    ++ AA  G +EV ++ V    D    N+ G T                  
Sbjct: 15  RRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGIT------------------ 56

Query: 531 LEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHG 590
                           ALH A    +   V  L + G  VN PD  G+TPL  AA     
Sbjct: 57  ----------------ALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDT 100

Query: 591 PMCELLISNGAVCDIKNAR-GETALSLARKNSSMKNDAELVI 631
            +C  L+ +GA         G TA          +       
Sbjct: 101 VICMALVQHGAAIFATTLSDGATAFEKC---DPYREGYADCA 139

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 97.3 bits (243), Expect = 6e-23
 Identities = 39/242 (16%), Positives = 67/242 (27%), Gaps = 50/242 (20%)

Query: 356 VQSLIDSGCDLNTKTE---SGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSI 412
           ++S++              +    L+ +A   + E V+   K   D              
Sbjct: 1   MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMND-------------- 46

Query: 413 AGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDY 472
                                  P   N    + L       + + +  LI     N++ 
Sbjct: 47  -----------------------PSQPNEEGITALHNAICGANYSIVDFLITAG-ANVNS 82

Query: 473 QDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKS-GKTAIMLSELNQNCDLFEKVML 531
            D +G++ +  AAS     +   LV  GA +     S G TA    +  +          
Sbjct: 83  PDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYA---DCA 139

Query: 532 EFALEKG----NRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAARE 587
            +  +        N+G  YAL   +     D +         V   DG   T    AA  
Sbjct: 140 TYLADVEQSMGLMNSGAVYALWDYSAEF-GDELSFREGESVTVLRRDGPEETDWWWAALH 198

Query: 588 GH 589
           G 
Sbjct: 199 GQ 200

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 96.2 bits (240), Expect = 1e-22
 Identities = 34/190 (17%), Positives = 55/190 (28%), Gaps = 42/190 (22%)

Query: 446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKL 505
            L+  A  G++  ++  +     +    ++ G +A+  A    +  +   L+ AGA+V  
Sbjct: 24  LLLDAALTGELEVVQQAVKEMN-DPSQPNEEGITALHNAICGANYSIVDFLITAGANVNS 82

Query: 506 LNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTS 565
            +  G T                                   LHCAA   D      L  
Sbjct: 83  PDSHGWT----------------------------------PLHCAASCNDTVICMALVQ 108

Query: 566 RGYGVNVPDG-DGYTPLMLAA--REGHGPMCELLISNGAVCDIKNARGETALSLARKNSS 622
            G  +      DG T        REG+      L        + N+    AL       S
Sbjct: 109 HGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDY----S 164

Query: 623 MKNDAELVIL 632
            +   EL   
Sbjct: 165 AEFGDELSFR 174

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 88.5 bits (220), Expect = 5e-20
 Identities = 43/211 (20%), Positives = 64/211 (30%), Gaps = 9/211 (4%)

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
              LL  A L G    V   +    D   P     T    +H A      +IV  LI +G
Sbjct: 21  PLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGIT---ALHNAICGANYSIVDFLITAG 77

Query: 364 CDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVS-GQSASSIAGSNWWSVGF 422
            ++N+    G T L  +A          L + GA     ++S G +A      + +  G+
Sbjct: 78  ANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKC--DPYREGY 135

Query: 423 QRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVM 482
                 +          N      L +   A     L    G E + +  +D    +   
Sbjct: 136 ADCATYLADVEQSMGLMNSGAVYAL-WDYSAEFGDELSFREG-ESVTVLRRDGPEETDWW 193

Query: 483 VAASKGHVE-VFRELVYAGADVKLLNKSGKT 512
            AA  G    V R        VK      K 
Sbjct: 194 WAALHGQEGYVPRNYFGLFPRVKPQRSKVKH 224

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 85.0 bits (211), Expect = 1e-18
 Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 4/95 (4%)

Query: 536 EKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCEL 595
           +           L  AA  G+L+ V+         + P+ +G T L  A    +  + + 
Sbjct: 13  KARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDF 72

Query: 596 LISNGAVCDIKNARGETALSLARKNSSMKNDAELV 630
           LI+ GA  +  ++ G T L  A    +  ND  + 
Sbjct: 73  LITAGANVNSPDSHGWTPLHCA----ASCNDTVIC 103

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 71.9 bits (177), Expect = 2e-14
 Identities = 34/304 (11%), Positives = 61/304 (20%), Gaps = 110/304 (36%)

Query: 96  VKKLLSTGADVNQKLFRGF----ATTIAVREGHLEILEILLKAGASQPACEE----ALLE 147
           ++ +L       +              A   G LE+++  +K         E    AL  
Sbjct: 1   MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITAL-- 58

Query: 148 ASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQS 207
                                H        A C     +VD L+  G ++N+ D      
Sbjct: 59  ---------------------HN-------AICGANYSIVDFLITAGANVNSPD------ 84

Query: 208 LKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAG 267
                  +   + L  A       +   L+Q GA               + G        
Sbjct: 85  -------SHGWTPLHCAASCNDTVICMALVQHGAAIFAT--------TLSDGA------- 122

Query: 268 LAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILC--GCTGAVAVLLS 325
                                                 T          G       L  
Sbjct: 123 --------------------------------------TAFEKCDPYREGYADCATYLAD 144

Query: 326 CGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQ 385
                           + +   +   +   +         +  +    ET    +A + Q
Sbjct: 145 VEQSMG---LMNSGAVYALWDYSA-EFGDELSFREGESVTVLRRDGPEETDWWWAALHGQ 200

Query: 386 EECV 389
           E  V
Sbjct: 201 EGYV 204

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 66.9 bits (164), Expect = 1e-12
 Identities = 25/179 (13%), Positives = 49/179 (27%), Gaps = 31/179 (17%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKAGASQ 138
             L  AA +G + +V++ +    D +Q    G   T    A+   +  I++ L+ AGA+ 
Sbjct: 23  VLLLDAALTGELEVVQQAVKEMNDPSQPNEEGI--TALHNAICGANYSIVDFLITAGANV 80

Query: 139 PACEE----ALLEASCHGQARLAELLMGS-------DLIRPHVAVHSLVTACCRGFVDVV 187
            + +      L  A+      +   L+          L     A          G+ D  
Sbjct: 81  NSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFE-KCDPYREGYADCA 139

Query: 188 DTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMK 246
             L      +   +                  AL     +     +            +
Sbjct: 140 TYLADVEQSMGLMNS--------GAVY-----ALWDY-SAEFGDELSFREGESVTVLRR 184

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 60.4 bits (147), Expect = 2e-10
 Identities = 31/217 (14%), Positives = 57/217 (26%), Gaps = 42/217 (19%)

Query: 187 VDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMK 246
           + ++++         R                  L+ A ++ ++ VVQ  ++   +    
Sbjct: 1   MRSVLRKAGSPRKARR----------ARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQP 50

Query: 247 VRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVE-YFEITGSILRMLLQH-LSYNSP-HY 303
                 + +  T              A+        + I       L+    + NSP  +
Sbjct: 51  ------NEEGIT--------------ALHNAICGANYSIV----DFLITAGANVNSPDSH 86

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARL--GYSTIVQSLID 361
           G T LH A  C  T     L+  GA       T                GY+     L D
Sbjct: 87  GWTPLHCAASCNDTVICMALVQHGAAIF--ATTLSDGATAFEKCDPYREGYADCATYLAD 144

Query: 362 SGCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
               +         AL   +    +E +         
Sbjct: 145 VEQSMGLMNSGAVYALWDYSAEFGDE-LSFREGESVT 180

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 12/61 (19%), Positives = 19/61 (31%), Gaps = 3/61 (4%)

Query: 560 VRLLTSRGYGVNVPDGDGYTP---LMLAAREGHGPMCELLISNGAVCDIKNARGETALSL 616
           +R +  +             P   L+ AA  G   + +  +         N  G TAL  
Sbjct: 1   MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHN 60

Query: 617 A 617
           A
Sbjct: 61  A 61

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  102 bits (254), Expect = 9e-24
 Identities = 44/288 (15%), Positives = 97/288 (33%), Gaps = 34/288 (11%)

Query: 355 IVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAG 414
           I+++L     + N +    E  L      + +E    L    ++      S         
Sbjct: 45  IMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVS 104

Query: 415 SNWWSVGFQRAVLDIIRSGNIPKSSNVAV------FSPLMFVAQAGDIAALKALIGREEL 468
            +        ++L  +         N+ +       +PL ++    ++  +K L+     
Sbjct: 105 FD--------SLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHG-S 155

Query: 469 NLDYQDDNGFSAVMVAASKGH---VEVFRELV-YAGADVKLLNKSGKTAI-------MLS 517
           N  Y D+ G S ++ A    +      F  L+ Y    + L +   +T +        ++
Sbjct: 156 NRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMT 215

Query: 518 ELNQNCDLFEKVMLEFALEKG--------NRNAGGFYALHCAARRGDLDAVRLLTSRGYG 569
             +     +  +++ + ++K         N         +   +   L+ + L       
Sbjct: 216 GCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANM 275

Query: 570 VNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLA 617
           +N  D +G T L +AAR G+  + + L+  GA   I N  G   +   
Sbjct: 276 LNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 323

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 99.3 bits (247), Expect = 8e-23
 Identities = 45/303 (14%), Positives = 83/303 (27%), Gaps = 52/303 (17%)

Query: 299 NSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQS 358
                    L   +          L +  ++      +   +    H++       +  +
Sbjct: 58  EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQ--HVSFDSLLQEVNDA 115

Query: 359 LIDSGCDLNTKT-ESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNW 417
             ++  +LN    E G T L         E VK L K G++       G+S         
Sbjct: 116 FPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESC-------- 167

Query: 418 WSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNG 477
                 +AV    +S N   S                  A L  L       L  +D   
Sbjct: 168 ----LVKAV----KSVNNYDSGTFE--------------ALLDYLYP----CLILEDSMN 201

Query: 478 FS----AVMVAASKGHVEVFR--------ELVYAGADVKLLNKSGKTAIMLSELNQNCDL 525
            +     ++ +   G     +         +V           + K +    +  +  D 
Sbjct: 202 RTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDS 261

Query: 526 FEKVMLEFALEKGNRNAG---GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLM 582
             + +    +     NA    G   L+ AAR G++  V  L   G    + +  G  P+ 
Sbjct: 262 ILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVD 321

Query: 583 LAA 585
             A
Sbjct: 322 FGA 324

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 77.4 bits (190), Expect = 2e-15
 Identities = 21/118 (17%), Positives = 38/118 (32%), Gaps = 6/118 (5%)

Query: 547 ALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGH----GPMCELLISNGAV 602
            LH      +L+ V+ L   G      D  G + L+ A +  +    G    LL      
Sbjct: 134 PLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPC 193

Query: 603 CDIKNARGETALSLARKNSSMKNDAELVI--LDEVARMLVLGGGHVLKHTKGGKGTPH 658
             ++++   T L      S M   +      LD +   +V      ++     K +  
Sbjct: 194 LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKP 251

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 62.4 bits (151), Expect = 2e-10
 Identities = 38/240 (15%), Positives = 73/240 (30%), Gaps = 45/240 (18%)

Query: 199 ATDRLLLQSLKPSLHTNVD---------CSALVAAVVSRQVSVVQLLLQAGANTDMKVRL 249
           + D LL +      +T ++          + L        + +V+ L++ G+N      +
Sbjct: 104 SFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNM 163

Query: 250 GAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHL--SYNSP-HYGRT 306
           G    ++                 +                 LL +L           RT
Sbjct: 164 G----ES----------------CLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRT 203

Query: 307 LLHHAILC----GCTGAVAVLLSCGA---------DAQCPIRTQKTEFHPIHLAARLGYS 353
           +LHH I+     GC+ A    L               Q     ++++ +  +   +    
Sbjct: 204 ILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSIL 263

Query: 354 TIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIA 413
             +         LN +  +G+T L I+A+      V  L   GAD  + + SG       
Sbjct: 264 ENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 323

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 60.8 bits (147), Expect = 5e-10
 Identities = 29/193 (15%), Positives = 51/193 (26%), Gaps = 41/193 (21%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGH---LEILEILLKAGAS 137
           T L       N+ LVK L+  G++       G      AV+  +       E LL     
Sbjct: 133 TPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP 192

Query: 138 -----------------QPACEEALLEASCHGQARLAELLM-------GSDLIRPHVAVH 173
                              +       A+ +    L   ++        S         +
Sbjct: 193 CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPN 252

Query: 174 SLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVV 233
                     ++ +D        +NA D             +   + L  A     +S+V
Sbjct: 253 DKNGERKDSILENLDLKWIIANMLNAQD-------------SNGDTCLNIAARLGNISIV 299

Query: 234 QLLLQAGANTDMK 246
             LL  GA+  + 
Sbjct: 300 DALLDYGADPFIA 312

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 60.0 bits (145), Expect = 8e-10
 Identities = 36/214 (16%), Positives = 68/214 (31%), Gaps = 37/214 (17%)

Query: 178 ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSR----QVSVV 233
                 +++V  L+K G +    D             N+  S LV AV S       +  
Sbjct: 138 LTSIANLELVKHLVKHGSNRLYGD-------------NMGESCLVKAVKSVNNYDSGTFE 184

Query: 234 QLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLL 293
            LL        ++  +       T           +     +  A  Y +I   ++  ++
Sbjct: 185 ALLDYLYPCLILEDSMNR-----TI---LHHIIITSGMTGCSAAAKYYLDI---LMGWIV 233

Query: 294 QHLSY--NSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQ----KTEFHPIHLA 347
           +  +    S    +    +        ++   L         +  Q     T    +++A
Sbjct: 234 KKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDT---CLNIA 290

Query: 348 ARLGYSTIVQSLIDSGCDLNTKTESGETALMISA 381
           ARLG  +IV +L+D G D     +SG   +   A
Sbjct: 291 ARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 324

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 52.3 bits (125), Expect = 2e-07
 Identities = 42/280 (15%), Positives = 81/280 (28%), Gaps = 53/280 (18%)

Query: 75  EEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKL-FRGF-ATTIAVREGHLEILEILL 132
           E   S+     ++  S    +     +T  ++N  +   G           +LE+++ L+
Sbjct: 92  EGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLV 151

Query: 133 KAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMK 192
           K G++        L     G++ L              AV S+       F  ++D L  
Sbjct: 152 KHGSN-------RLYGDNMGESCL------------VKAVKSVNNYDSGTFEALLDYL-- 190

Query: 193 CGVDINATDRLLLQSLKPSLHTNVDCSA---LVAAVVSRQVSVVQLLLQAGANTDMKVRL 249
               +   D       +  LH  +  S      AA       ++  +++           
Sbjct: 191 -YPCLILED----SMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTN 245

Query: 250 GAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSP-HYGRTLL 308
                              ++P        +       +  ++   L  N+    G T L
Sbjct: 246 EKE----------------SKPNDKNGERKDSILENLDLKWIIANML--NAQDSNGDTCL 287

Query: 309 HHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAA 348
           + A   G    V  LL  GAD     ++      P+   A
Sbjct: 288 NIAARLGNISIVDALLDYGADPFIANKSGLR---PVDFGA 324

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  100 bits (251), Expect = 9e-24
 Identities = 39/335 (11%), Positives = 77/335 (22%), Gaps = 100/335 (29%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
           Y R  +  A+       +  LL                               +Q     
Sbjct: 12  YDRRSIFDAVAQSNCQELESLLP-----------------------------FLQRSKKR 42

Query: 363 GCDLNTK-TESGETALM---ISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWW 418
             D   K  E+G+T L+   ++    Q + + +L         +                
Sbjct: 43  LTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFV------------ 90

Query: 419 SVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGR------------- 465
                               S     + L    +  ++  +  L+               
Sbjct: 91  --------------NASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFF 136

Query: 466 EELNLDYQDDNGFSAVMVAASKGHVEVFRELV---YAGADVKLLNKSGKTAIMLSELNQN 522
           ++         G   + +AA    + + + L+   +  AD+   +  G T          
Sbjct: 137 KKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTV--------- 187

Query: 523 CDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLM 582
                   L   +E  + N         +     L     L        + +  G TPL 
Sbjct: 188 --------LHALVEVAD-NTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLA 238

Query: 583 LAAREGHGPMCELLISNGAVCDIKNARGETALSLA 617
           LAA  G   +   ++                   A
Sbjct: 239 LAASSGKIGVLAYILQRE-------IHEPECRHAA 266

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 82.9 bits (205), Expect = 9e-18
 Identities = 42/259 (16%), Positives = 78/259 (30%), Gaps = 62/259 (23%)

Query: 283 EITGSILRMLLQHLSYNS------PHYGRTLLHHAIL---CGCTGAVAVLLSCGADAQCP 333
           +   S+L  L +     +      P  G+T L  A+L    G    +A+LL         
Sbjct: 27  QELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL 86

Query: 334 IRTQKTEFH--------PIHLAARLGYSTIVQSLIDSGCDLNTKTES------------- 372
            +     +          +H+A      T+V  L+++G D+                   
Sbjct: 87  KQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFY 146

Query: 373 -GETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDII- 430
            GE  L ++A   Q   VK L                             +Q A +    
Sbjct: 147 FGELPLSLAACTNQLAIVKFL-------------------------LQNSWQPADISARD 181

Query: 431 RSGNIP-----KSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAA 485
             GN       + ++  V +     +   +I  L A +       +  +  G + + +AA
Sbjct: 182 SVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAA 241

Query: 486 SKGHVEVFRELVYAGADVK 504
           S G + V   ++       
Sbjct: 242 SSGKIGVLAYILQREIHEP 260

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 82.5 bits (204), Expect = 1e-17
 Identities = 37/245 (15%), Positives = 72/245 (29%), Gaps = 57/245 (23%)

Query: 446 PLMFVAQAGDIAALKALI------GREELNLDYQD-DNGFSAVMVA---ASKGHVEVFRE 495
            +       +   L++L+       +   + +++D + G + ++ A      G  +    
Sbjct: 16  SIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIAL 75

Query: 496 LVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRG 555
           L+        L +          +N +                +    G  ALH A  R 
Sbjct: 76  LLDVARKTDSLKQF---------VNASYT--------------DSYYKGQTALHIAIERR 112

Query: 556 DLDAVRLLTSRGYGVNVPDGD--------------GYTPLMLAAREGHGPMCELLISNG- 600
           ++  V LL   G  V                    G  PL LAA      + + L+ N  
Sbjct: 113 NMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSW 172

Query: 601 --AVCDIKNARGETALSLA-RKNSSMKNDAELVI-----LDEVARMLVLGGGHVLKHTKG 652
             A    +++ G T L        +  ++ + V      +  +   L           + 
Sbjct: 173 QPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRK 232

Query: 653 GKGTP 657
           G  TP
Sbjct: 233 GL-TP 236

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 70.6 bits (173), Expect = 1e-13
 Identities = 47/322 (14%), Positives = 90/322 (27%), Gaps = 79/322 (24%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLL-------STGADVNQKLFRGFAT-----TIAVREGHL 125
             D  ++F A    N   ++ LL           D   K      T      + +  G  
Sbjct: 11  LYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQN 70

Query: 126 EILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVD 185
           + + +LL       + ++  + AS                 +   A+H    A  R  + 
Sbjct: 71  DTIALLLDVARKTDSLKQ-FVNASYT-----------DSYYKGQTALH---IAIERRNMT 115

Query: 186 VVDTLMKCGVDINATDR-LLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAG---A 241
           +V  L++ G D+ A       +  K           L  A  + Q+++V+ LLQ     A
Sbjct: 116 LVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPA 175

Query: 242 NTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSP 301
           +   +  +G    +T                               +L  L++       
Sbjct: 176 DISARDSVG----NT-------------------------------VLHALVE---VADN 197

Query: 302 HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLID 361
               T    ++        A L       +   R   T   P+ LAA  G   ++  ++ 
Sbjct: 198 TVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLT---PLALAASSGKIGVLAYILQ 254

Query: 362 SGCDLNTKTESGETALMISAKY 383
                             +A +
Sbjct: 255 REIH-------EPECRHAAAHH 269

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 66.3 bits (162), Expect = 5e-12
 Identities = 35/168 (20%), Positives = 46/168 (27%), Gaps = 41/168 (24%)

Query: 499 AGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNA--------GGFYALHC 550
             A  K      + +I  +    NC   E + L F      R           G   L  
Sbjct: 2   VSAGEKPPRLYDRRSIFDAVAQSNCQELESL-LPFLQRSKKRLTDSEFKDPETGKTCLLK 60

Query: 551 A---ARRGDLDAVRLLTSRG-------YGVNVP----DGDGYTPLMLAAREGHGPMCELL 596
           A      G  D + LL             VN         G T L +A    +  +  LL
Sbjct: 61  AMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLL 120

Query: 597 ISNGA--------------VCDIKNARGETALSLARKNSSMKNDAELV 630
           + NGA                      GE  LSLA    +  N   +V
Sbjct: 121 VENGADVQAAANGDFFKKTKGRPGFYFGELPLSLA----ACTNQLAIV 164

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 92.8 bits (232), Expect = 2e-22
 Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 35/162 (21%)

Query: 470 LDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKV 529
             +   +    ++ AA  G  +  R L+  GADV   ++ G T                 
Sbjct: 7   HHHHGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTP---------------- 50

Query: 530 MLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGH 589
                             L+ A   G L+ V +L   G  VN  D  G+TPL LAA  GH
Sbjct: 51  ------------------LYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGH 92

Query: 590 GPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVI 631
             + E+L+ +GA  + ++  G+TA  ++  N + ++ AE++ 
Sbjct: 93  LEIAEVLLKHGADVNAQDKFGKTAFDISIGNGN-EDLAEILQ 133

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 80.5 bits (200), Expect = 3e-18
 Identities = 34/153 (22%), Positives = 60/153 (39%), Gaps = 35/153 (22%)

Query: 446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKL 505
            L+  A+AG    ++ L+     +++ +D+ G + + +A + GH+E+   L+  GADV  
Sbjct: 17  KLLEAARAGQDDEVRILMANGA-DVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNA 75

Query: 506 LNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTS 565
           ++  G T                                   LH AA  G L+   +L  
Sbjct: 76  VDAIGFT----------------------------------PLHLAAFIGHLEIAEVLLK 101

Query: 566 RGYGVNVPDGDGYTPLMLAAREGHGPMCELLIS 598
            G  VN  D  G T   ++   G+  + E+L  
Sbjct: 102 HGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 69.3 bits (171), Expect = 3e-14
 Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 7/97 (7%)

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFH--PIHLAARLGYSTIVQSLID 361
               L  A   G    V +L++ GAD        K E+   P++LA   G+  IV+ L+ 
Sbjct: 14  LGKKLLEAARAGQDDEVRILMANGADV-----NAKDEYGLTPLYLATAHGHLEIVEVLLK 68

Query: 362 SGCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
           +G D+N     G T L ++A     E  +VL K GAD
Sbjct: 69  NGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGAD 105

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 67.4 bits (166), Expect = 1e-13
 Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 3/90 (3%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
           YG T L+ A   G    V VLL  GAD         T   P+HLAA +G+  I + L+  
Sbjct: 46  YGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFT---PLHLAAFIGHLEIAEVLLKH 102

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVL 392
           G D+N + + G+TA  IS     E+  ++L
Sbjct: 103 GADVNAQDKFGKTAFDISIGNGNEDLAEIL 132

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 56.6 bits (138), Expect = 7e-10
 Identities = 32/84 (38%), Positives = 43/84 (51%), Gaps = 5/84 (5%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPA 140
             L  AA +G    V+ L++ GADVN K   G     +A   GHLEI+E+LLK GA   A
Sbjct: 16  KKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNA 75

Query: 141 CEE----ALLEASCHGQARLAELL 160
            +      L  A+  G   +AE+L
Sbjct: 76  VDAIGFTPLHLAAFIGHLEIAEVL 99

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 53.9 bits (131), Expect = 6e-09
 Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 9/86 (10%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKAGASQ 138
           T L+LA   G++ +V+ LL  GADVN     GF  T   +A   GHLEI E+LLK GA  
Sbjct: 49  TPLYLATAHGHLEIVEVLLKNGADVNAVDAIGF--TPLHLAAFIGHLEIAEVLLKHGADV 106

Query: 139 PACEE----ALLEASCHGQARLAELL 160
            A ++    A   +  +G   LAE+L
Sbjct: 107 NAQDKFGKTAFDISIGNGNEDLAEIL 132

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 48.9 bits (118), Expect = 4e-07
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLK 133
           T L LAA  G++ + + LL  GADVN +   G  A  I++  G+ ++ EIL K
Sbjct: 82  TPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 47.4 bits (114), Expect = 1e-06
 Identities = 34/193 (17%), Positives = 59/193 (30%), Gaps = 72/193 (37%)

Query: 373 GETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRS 432
               L+ +A+  Q++ V++L   GAD       G +                        
Sbjct: 14  LGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLT------------------------ 49

Query: 433 GNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEV 492
                        PL      G +  ++ L+     +++  D  GF+ + +AA  GH+E+
Sbjct: 50  -------------PLYLATAHGHLEIVEVLLKNG-ADVNAVDAIGFTPLHLAAFIGHLEI 95

Query: 493 FRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAA 552
              L+  GADV   +K GKT                                  A   + 
Sbjct: 96  AEVLLKHGADVNAQDKFGKT----------------------------------AFDISI 121

Query: 553 RRGDLDAVRLLTS 565
             G+ D   +L  
Sbjct: 122 GNGNEDLAEILQK 134

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 44.7 bits (107), Expect = 1e-05
 Identities = 31/148 (20%), Positives = 57/148 (38%), Gaps = 45/148 (30%)

Query: 99  LLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAE 158
               G+D+ +KL        A R G  + + IL+  GA   A +E       +G   L  
Sbjct: 7   HHHHGSDLGKKLL------EAARAGQDDEVRILMANGADVNAKDE-------YGLTPL-- 51

Query: 159 LLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDC 218
                     ++A          G +++V+ L+K G D+NA D              +  
Sbjct: 52  ----------YLA-------TAHGHLEIVEVLLKNGADVNAVD-------------AIGF 81

Query: 219 SALVAAVVSRQVSVVQLLLQAGANTDMK 246
           + L  A     + + ++LL+ GA+ + +
Sbjct: 82  TPLHLAAFIGHLEIAEVLLKHGADVNAQ 109

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 90.1 bits (225), Expect = 5e-22
 Identities = 45/126 (35%), Positives = 60/126 (47%), Gaps = 34/126 (26%)

Query: 476 NGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFAL 535
           NG + + +AA  GH+EV + L+ AGADV   +K+G+T                       
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRT----------------------- 37

Query: 536 EKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCEL 595
                       LH AAR G L+ V+LL   G  VN  D +G TPL LAAR GH  + +L
Sbjct: 38  -----------PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKL 86

Query: 596 LISNGA 601
           L+  GA
Sbjct: 87  LLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 85.5 bits (213), Expect = 2e-20
 Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 10/102 (9%)

Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC 603
           G   LH AAR G L+ V+LL   G  VN  D +G TPL LAAR GH  + +LL+  GA  
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV 61

Query: 604 DIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGH 645
           + K+  G T L LA +N  +          EV ++L+  G +
Sbjct: 62  NAKDKNGRTPLHLAARNGHL----------EVVKLLLEAGAY 93

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 72.8 bits (180), Expect = 5e-16
 Identities = 38/94 (40%), Positives = 56/94 (59%), Gaps = 3/94 (3%)

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
           GRT LH A   G    V +LL  GAD     +  +T   P+HLAAR G+  +V+ L+++G
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRT---PLHLAARNGHLEVVKLLLEAG 58

Query: 364 CDLNTKTESGETALMISAKYKQEECVKVLAKAGA 397
            D+N K ++G T L ++A+    E VK+L +AGA
Sbjct: 59  ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 59.3 bits (145), Expect = 3e-11
 Identities = 25/56 (44%), Positives = 40/56 (71%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
           P+HLAAR G+  +V+ L+++G D+N K ++G T L ++A+    E VK+L +AGAD
Sbjct: 5   PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 59.3 bits (145), Expect = 3e-11
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 11/82 (13%)

Query: 576 DGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEV 635
           +G TPL LAAR GH  + +LL+  GA  + K+  G T L LA +N  +          EV
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL----------EV 50

Query: 636 ARMLVLGGGHVLKHTKGGKGTP 657
            ++L+  G  V    K G+ TP
Sbjct: 51  VKLLLEAGADVNAKDKNGR-TP 71

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 58.1 bits (142), Expect = 7e-11
 Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 35/122 (28%)

Query: 446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKL 505
           PL   A+ G +  +K L+     +++ +D NG + + +AA  GH+EV + L+ AGADV  
Sbjct: 5   PLHLAARNGHLEVVKLLLEAGA-DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63

Query: 506 LNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTS 565
            +K+G+T                                   LH AAR G L+ V+LL  
Sbjct: 64  KDKNGRT----------------------------------PLHLAARNGHLEVVKLLLE 89

Query: 566 RG 567
            G
Sbjct: 90  AG 91

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 57.4 bits (140), Expect = 1e-10
 Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 5/62 (8%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKA 134
           K+  T L LAA +G++ +VK LL  GADVN K   G   T   +A R GHLE++++LL+A
Sbjct: 33  KNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGR--TPLHLAARNGHLEVVKLLLEA 90

Query: 135 GA 136
           GA
Sbjct: 91  GA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 57.4 bits (140), Expect = 1e-10
 Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 9/86 (10%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKAGASQ 138
           T L LAA +G++ +VK LL  GADVN K   G   T   +A R GHLE++++LL+AGA  
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGR--TPLHLAARNGHLEVVKLLLEAGADV 61

Query: 139 PACEE----ALLEASCHGQARLAELL 160
            A ++     L  A+ +G   + +LL
Sbjct: 62  NAKDKNGRTPLHLAARNGHLEVVKLL 87

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 42.3 bits (101), Expect = 2e-05
 Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 38/130 (29%)

Query: 372 SGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIR 431
           +G T L ++A+    E VK+L +AGAD      +G++                       
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRT----------------------- 37

Query: 432 SGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVE 491
                         PL   A+ G +  +K L+     +++ +D NG + + +AA  GH+E
Sbjct: 38  --------------PLHLAARNGHLEVVKLLLEAGA-DVNAKDKNGRTPLHLAARNGHLE 82

Query: 492 VFRELVYAGA 501
           V + L+ AGA
Sbjct: 83  VVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 40.8 bits (97), Expect = 1e-04
 Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 39/124 (31%)

Query: 118 IAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVT 177
           +A R GHLE++++LL+AGA   A ++       +G+                     L  
Sbjct: 8   LAARNGHLEVVKLLLEAGADVNAKDK-------NGRT-------------------PLHL 41

Query: 178 ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL 237
           A   G ++VV  L++ G D+NA D                 + L  A  +  + VV+LLL
Sbjct: 42  AARNGHLEVVKLLLEAGADVNAKD-------------KNGRTPLHLAARNGHLEVVKLLL 88

Query: 238 QAGA 241
           +AGA
Sbjct: 89  EAGA 92

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 90.3 bits (225), Expect = 7e-22
 Identities = 35/141 (24%), Positives = 50/141 (35%), Gaps = 37/141 (26%)

Query: 484 AASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAG 543
            +S  H      LV  G+ +                                        
Sbjct: 1   GSSHHHHHHSSGLVPRGSHM---GSDLGKK------------------------------ 27

Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC 603
               L  AAR G  D VR+L + G  V   D +G TPL LAAR GH  + +LL+  GA  
Sbjct: 28  ----LLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADV 83

Query: 604 DIKNARGETALSLARKNSSMK 624
             ++  G+TA  ++  N +  
Sbjct: 84  XAQDKFGKTAFDISIDNGNED 104

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 68.0 bits (167), Expect = 4e-14
 Identities = 30/123 (24%), Positives = 44/123 (35%), Gaps = 34/123 (27%)

Query: 474 DDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEF 533
             +    ++ AA  G  +  R L+  GADV   +K+G T                     
Sbjct: 21  GSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGST--------------------- 59

Query: 534 ALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMC 593
                         LH AAR G L+ V+LL   G  V   D  G T   ++   G+  + 
Sbjct: 60  -------------PLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLA 106

Query: 594 ELL 596
           E+L
Sbjct: 107 EIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 66.8 bits (164), Expect = 1e-13
 Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 6/102 (5%)

Query: 315 GCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGE 374
                 + L+  G+     +         +  AAR G    V+ L+ +G D+  K ++G 
Sbjct: 5   HHHHHSSGLVPRGSHMGSDLGK------KLLEAARAGQDDEVRILMANGADVAAKDKNGS 58

Query: 375 TALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSN 416
           T L ++A+    E VK+L +AGAD       G++A  I+  N
Sbjct: 59  TPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDN 100

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 59.9 bits (146), Expect = 3e-11
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 3/89 (3%)

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
               L  A   G    V +L++ GAD     +   T   P+HLAAR G+  +V+ L+++G
Sbjct: 24  LGKKLLEAARAGQDDEVRILMANGADVAAKDKNGST---PLHLAARNGHLEVVKLLLEAG 80

Query: 364 CDLNTKTESGETALMISAKYKQEECVKVL 392
            D+  + + G+TA  IS     E+  ++L
Sbjct: 81  ADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 59.5 bits (145), Expect = 4e-11
 Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 5/84 (5%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPA 140
             L  AA +G    V+ L++ GADV  K   G     +A R GHLE++++LL+AGA   A
Sbjct: 26  KKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXA 85

Query: 141 CEE----ALLEASCHGQARLAELL 160
            ++    A   +  +G   LAE+L
Sbjct: 86  QDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 53.0 bits (128), Expect = 9e-09
 Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 1/82 (1%)

Query: 446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKL 505
            L+  A+AG    ++ L+     ++  +D NG + + +AA  GH+EV + L+ AGADV  
Sbjct: 27  KLLEAARAGQDDEVRILMANGA-DVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXA 85

Query: 506 LNKSGKTAIMLSELNQNCDLFE 527
            +K GKTA  +S  N N DL E
Sbjct: 86  QDKFGKTAFDISIDNGNEDLAE 107

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 50.7 bits (122), Expect = 5e-08
 Identities = 21/111 (18%), Positives = 44/111 (39%), Gaps = 9/111 (8%)

Query: 87  AAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPACEE--- 143
            +   +      L+  G+ +   L +      A R G  + + IL+  GA   A ++   
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSDLGK--KLLEAARAGQDDEVRILMANGADVAAKDKNGS 58

Query: 144 -ALLEASCHGQARLAELLM--GSDL-IRPHVAVHSLVTACCRGFVDVVDTL 190
             L  A+ +G   + +LL+  G+D+  +      +   +   G  D+ + L
Sbjct: 59  TPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 49.1 bits (118), Expect = 2e-07
 Identities = 23/150 (15%), Positives = 49/150 (32%), Gaps = 41/150 (27%)

Query: 347 AARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSG 406
            +   +      L+  G  + +        L+ +A+  Q++ V++L   GAD      +G
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSD---LGKKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 407 QSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGRE 466
                                                 +PL   A+ G +  +K L+   
Sbjct: 58  S-------------------------------------TPLHLAARNGHLEVVKLLLEA- 79

Query: 467 ELNLDYQDDNGFSAVMVAASKGHVEVFREL 496
             ++  QD  G +A  ++   G+ ++   L
Sbjct: 80  GADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 44.5 bits (106), Expect = 7e-06
 Identities = 27/125 (21%), Positives = 38/125 (30%), Gaps = 44/125 (35%)

Query: 119 AVREGHLEILEILLKAGASQPACEE-ALLEASCHGQARLAELLMGSDLIRPHVAVHSLVT 177
                H      L+  G+   +     LLEA+  GQ                        
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSDLGKKLLEAARAGQ------------------------ 36

Query: 178 ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL 237
                  D V  LM  G D+ A D                 + L  A  +  + VV+LLL
Sbjct: 37  ------DDEVRILMANGADVAAKD-------------KNGSTPLHLAARNGHLEVVKLLL 77

Query: 238 QAGAN 242
           +AGA+
Sbjct: 78  EAGAD 82

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 13/74 (17%), Positives = 22/74 (29%), Gaps = 14/74 (18%)

Query: 584 AAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGG 643
            +   H      L+  G+   +  +     L  A +              +  R+L+  G
Sbjct: 1   GSSHHHHHHSSGLVPRGS--HM-GSDLGKKLLEAARAGQD----------DEVRILMANG 47

Query: 644 GHVLKHTKGGKGTP 657
             V    K G  TP
Sbjct: 48  ADVAAKDKNGS-TP 60

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 82.5 bits (204), Expect = 1e-17
 Identities = 37/174 (21%), Positives = 56/174 (32%), Gaps = 34/174 (19%)

Query: 478 FSAVMVAASKGHVEVFRELVYAGADV----KLLNKSGKTAIMLSELNQNCDLFE--KVML 531
           F  V   +  G   +   L+     +         +GKT +  + LN +    +   ++L
Sbjct: 10  FDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILL 69

Query: 532 EFALEKGN-----------RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPD------ 574
           + A + GN               G  ALH A  R     V LL  +G  V+         
Sbjct: 70  DIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQ 129

Query: 575 --------GDGYTPLMLAAREGHGPMCELLISNGAVC---DIKNARGETALSLA 617
                     G  PL LAA      +   L  NG        +++RG T L   
Sbjct: 130 PKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHAL 183

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 82.1 bits (203), Expect = 2e-17
 Identities = 36/185 (19%), Positives = 53/185 (28%), Gaps = 41/185 (22%)

Query: 457 AALKALIGREELNLDY--QDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAI 514
            A K    RE +N  +      G +A+ +A  +        LV  GADV   +   +   
Sbjct: 71  IAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADV---HAQARGRF 127

Query: 515 MLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYG---VN 571
              +       F                 G   L  AA       V  LT  G+    + 
Sbjct: 128 FQPKDEGGYFYF-----------------GELPLSLAACTNQPHIVHYLTENGHKQADLR 170

Query: 572 VPDGDGYTPLMLAAREGHG---------PMCELLISNGA-------VCDIKNARGETALS 615
             D  G T L                   M +LL+   A       +  + N  G + L 
Sbjct: 171 RQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLM 230

Query: 616 LARKN 620
           +A K 
Sbjct: 231 MAAKT 235

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 77.5 bits (191), Expect = 5e-16
 Identities = 48/331 (14%), Positives = 85/331 (25%), Gaps = 103/331 (31%)

Query: 303 YGRTLLHHAILCGCTGA----VAVLLSCGADAQCPIRTQ----KTEFHPIHLAA---RLG 351
           + R +L   +  G        ++ LL+           +    KT    +  A      G
Sbjct: 4   FNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKT---CLPKALLNLSAG 60

Query: 352 YSTIVQSLIDSGCDL-----------NTKTESGETALMISAKYKQEECVKVLAKAGADFG 400
            +  +  L+D                      G+TAL I+ + + +  V++L + GAD  
Sbjct: 61  RNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD-- 118

Query: 401 LVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALK 460
            V    +              F                       PL   A       + 
Sbjct: 119 -VHAQARGRFFQPKDEGGYFYFGE--------------------LPLSLAACTNQPHIVH 157

Query: 461 ALI--GREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSE 518
            L   G ++ +L  QD  G + +    +                                
Sbjct: 158 YLTENGHKQADLRRQDSRGNTVLHALVAIADN---------------------------- 189

Query: 519 LNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGY 578
             +    F   M +  L K                   L     L        + + DG 
Sbjct: 190 -TRENTKFVTKMYDLLLIKC----------------AKLFPDTNLE------ALLNNDGL 226

Query: 579 TPLMLAAREGHGPMCELLISNGAVCDIKNAR 609
           +PLM+AA+ G   + + +I          A 
Sbjct: 227 SPLMMAAKTGKIGIFQHIIRREI--ADAAAH 255

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 69.0 bits (169), Expect = 4e-13
 Identities = 50/279 (17%), Positives = 83/279 (29%), Gaps = 62/279 (22%)

Query: 80  DVTALFLAAHSGNVT----LVKKLLSTGADVNQKLFRGFAT--T---IAV---REGHLEI 127
           +   LF     G+      L+  LL+    +  + FR  +T  T    A+     G  + 
Sbjct: 5   NRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDT 64

Query: 128 LEILLKAGASQPACEEAL----LEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGF 183
           + ILL          E +     +    GQ  L            H+A+        R  
Sbjct: 65  IPILLDIAEKTGNMREFINSPFRDVYYRGQTAL------------HIAIE-------RRC 105

Query: 184 VDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVD-CSALVAAVVSRQVSVVQLLLQAG-- 240
              V+ L++ G D++A  R      K            L  A  + Q  +V  L + G  
Sbjct: 106 KHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHK 165

Query: 241 -ANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYN 299
            A+   +   G    +T           L    AI     E  +    +  +LL   +  
Sbjct: 166 QADLRRQDSRG----NTV----------LHALVAIADNTRENTKFVTKMYDLLLIKCAKL 211

Query: 300 SP---------HYGRTLLHHAILCGCTGAVAVLLSCGAD 329
            P         + G + L  A   G  G    ++     
Sbjct: 212 FPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIA 250

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 62.9 bits (153), Expect = 6e-11
 Identities = 39/255 (15%), Positives = 62/255 (24%), Gaps = 79/255 (30%)

Query: 169 HVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSR 228
              V         G   ++  L+     +   +     + K  L          A +   
Sbjct: 10  FDIVSR---GSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLP--------KALLNLS 58

Query: 229 --QVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITG 286
             +   + +LL     T                                           
Sbjct: 59  AGRNDTIPILLDIAEKTG------------------------------------------ 76

Query: 287 SILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGAD---------AQCPIRTQ 337
             +R  +     +  + G+T LH AI   C   V +L+  GAD          Q      
Sbjct: 77  -NMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGG 135

Query: 338 KTEF--HPIHLAARLGYSTIVQSLIDSG---CDLNTKTESGETALMISAKYKQE------ 386
              F   P+ LAA      IV  L ++G    DL  +   G T L               
Sbjct: 136 YFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTK 195

Query: 387 ---ECVKVLAKAGAD 398
              +   +L    A 
Sbjct: 196 FVTKMYDLLLIKCAK 210

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 73.9 bits (181), Expect = 1e-14
 Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 3/101 (2%)

Query: 525 LFEKVMLEFALEKGNRNAGGFYALHCAARRGD---LDAVRLLTSRGYGVNVPDGDGYTPL 581
             + V L   +   N +     ALH A R  D   L  V  L      ++   G G T L
Sbjct: 150 YADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTAL 209

Query: 582 MLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSS 622
                  +    +LL+   A  +I N  GET L +A++   
Sbjct: 210 HYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKH 250

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 62.3 bits (151), Expect = 1e-10
 Identities = 21/105 (20%), Positives = 39/105 (37%), Gaps = 6/105 (5%)

Query: 294 QHLSYNSPHYGRTLLHHAILCGCTGAVAV---LLSCGADAQCPIRTQKTEFHPIHLAARL 350
           +    N      T LH A+      ++ +   L+    +         T    +H     
Sbjct: 159 KIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGST---ALHYCCLT 215

Query: 351 GYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKA 395
             +  ++ L+     +    ESGET L I+ + K E C ++L +A
Sbjct: 216 DNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQA 260

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 61.9 bits (150), Expect = 1e-10
 Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 6/101 (5%)

Query: 319 AVAVLLSCGADAQCPIRTQKTEFH---PIHLAARLG---YSTIVQSLIDSGCDLNTKTES 372
            +    + G D    I            +HLA R        IV  L+ +  +L+ +T  
Sbjct: 145 GLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGK 204

Query: 373 GETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIA 413
           G TAL         EC+K+L +  A   + + SG++   IA
Sbjct: 205 GSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIA 245

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 51.9 bits (124), Expect = 2e-07
 Identities = 20/92 (21%), Positives = 39/92 (42%), Gaps = 6/92 (6%)

Query: 510 GKTAIMLSELNQNCDLFEKVMLEFALEKGN----RNAGGFYALHCAARRGDLDAVRLLTS 565
            +TA+ L+  + +       +++F ++       +   G  ALH      + + ++LL  
Sbjct: 169 DETALHLAVRSVDRTSL--HIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR 226

Query: 566 RGYGVNVPDGDGYTPLMLAAREGHGPMCELLI 597
               + + +  G TPL +A R  H    ELL 
Sbjct: 227 GKASIEIANESGETPLDIAKRLKHEHCEELLT 258

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 47.3 bits (112), Expect = 8e-06
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 8/88 (9%)

Query: 82  TALFLAAHSGN---VTLVKKLLSTGADVNQKLFRG-FATTIAVREGHLEILEILLKAGAS 137
           TAL LA  S +   + +V  L+    +++++  +G  A        + E L++LL+  AS
Sbjct: 171 TALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKAS 230

Query: 138 QPACEE----ALLEASCHGQARLAELLM 161
                E     L  A         ELL 
Sbjct: 231 IEIANESGETPLDIAKRLKHEHCEELLT 258

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 46.1 bits (109), Expect = 2e-05
 Identities = 20/94 (21%), Positives = 43/94 (45%), Gaps = 4/94 (4%)

Query: 445 SPLMFVAQAGDIAALKA--LIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGAD 502
           + L    ++ D  +L     + +   NLD Q   G +A+       + E  + L+   A 
Sbjct: 171 TALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKAS 230

Query: 503 VKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALE 536
           +++ N+SG+T + +++  ++    E  +L  AL 
Sbjct: 231 IEIANESGETPLDIAKRLKHEHCEE--LLTQALS 262

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 69.4 bits (169), Expect = 9e-13
 Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 4/95 (4%)

Query: 544 GFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC 603
               L  A     L A   L   G  VN  D  G  PL  A   GH  +  L +  GA  
Sbjct: 235 NATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADL 294

Query: 604 DIKNARGETALSLARKNSSMKNDAELVILDEVARM 638
             +++ G   L++A + ++    A++V L  +A+M
Sbjct: 295 GARDSEGRDPLTIAMETAN----ADIVTLLRLAKM 325

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 66.0 bits (160), Expect = 1e-11
 Identities = 25/117 (21%), Positives = 39/117 (33%), Gaps = 1/117 (0%)

Query: 297 SYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIV 356
              S H G  L   +        +A  L+ GAD       Q     P+  A         
Sbjct: 193 DLGSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNA-TPLIQATAANSLLAC 251

Query: 357 QSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIA 413
           + L+ +G ++N    +G   L  +          +  K GAD G     G+   +IA
Sbjct: 252 EFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIA 308

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 56.7 bits (136), Expect = 1e-08
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 3/97 (3%)

Query: 299 NSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQS 358
           N      T L  A       A   LL  GA+             P+H A  LG++ +   
Sbjct: 230 NGGQDNATPLIQATAANSLLACEFLLQNGANV--NQADSAGRG-PLHHATILGHTGLACL 286

Query: 359 LIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKA 395
            +  G DL  +   G   L I+ +    + V +L  A
Sbjct: 287 FLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLA 323

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 52.1 bits (124), Expect = 3e-07
 Identities = 27/117 (23%), Positives = 42/117 (35%), Gaps = 7/117 (5%)

Query: 484 AASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG----N 539
           +     +    + +  GADV  +N     A  L +      L   +  EF L+ G     
Sbjct: 207 SGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSL---LACEFLLQNGANVNQ 263

Query: 540 RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELL 596
            ++ G   LH A   G      L   RG  +   D +G  PL +A    +  +  LL
Sbjct: 264 ADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLL 320

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 51.3 bits (122), Expect = 6e-07
 Identities = 19/79 (24%), Positives = 28/79 (35%), Gaps = 2/79 (2%)

Query: 546 YALHCAARRGDLDAVRLLTSRGYGVNVPDG--DGYTPLMLAAREGHGPMCELLISNGAVC 603
                +     L  +    + G  VN  +G  D  TPL+ A        CE L+ NGA  
Sbjct: 202 LLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV 261

Query: 604 DIKNARGETALSLARKNSS 622
           +  ++ G   L  A     
Sbjct: 262 NQADSAGRGPLHHATILGH 280

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 47.9 bits (113), Expect = 8e-06
 Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 3/100 (3%)

Query: 445 SPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVK 504
           +PL+    A  + A + L+     N++  D  G   +  A   GH  +    +  GAD+ 
Sbjct: 237 TPLIQATAANSLLACEFLLQNG-ANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLG 295

Query: 505 LLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGG 544
             +  G+  + ++    N D+    +L  A  +    A G
Sbjct: 296 ARDSEGRDPLTIAMETANADIVT--LLRLAKMREAEAAQG 333

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 45.9 bits (108), Expect = 3e-05
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 5/84 (5%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRG-FATTIAVREGHLEILEILLKAGASQPA 140
           T L  A  + ++   + LL  GA+VNQ    G      A   GH  +  + LK GA   A
Sbjct: 237 TPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGA 296

Query: 141 CEE----ALLEASCHGQARLAELL 160
            +      L  A     A +  LL
Sbjct: 297 RDSEGRDPLTIAMETANADIVTLL 320

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 68.1 bits (166), Expect = 2e-12
 Identities = 28/98 (28%), Positives = 39/98 (39%), Gaps = 7/98 (7%)

Query: 544 GFYALHCAARRGD---LDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
               LH A +  +   L  V  +   G  ++    DG T L  AA        +LL+   
Sbjct: 190 EELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGR 249

Query: 601 AVCDIKNARGETALSLARKNSSMKNDAELVILDEVARM 638
           A+    N  GETAL +ARK     +  E   L E A+ 
Sbjct: 250 ALVGTVNEAGETALDIARKK----HHKECEELLEQAQA 283

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 66.9 bits (163), Expect = 4e-12
 Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 6/111 (5%)

Query: 309 HHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFH---PIHLAARLGYST---IVQSLIDS 362
             AI      +V    + G D   P+     +      +HLA ++       +V  +I +
Sbjct: 156 WTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN 215

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIA 413
           G  L+ K   G TAL  +A Y Q +C+K+L K  A  G V+ +G++A  IA
Sbjct: 216 GGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIA 266

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 57.3 bits (138), Expect = 5e-09
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 6/98 (6%)

Query: 304 GRTLLHHAILCGCTGAVAV---LLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLI 360
              +LH A+      ++ +   ++  G           T    +H AA       ++ L+
Sbjct: 190 EELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNT---ALHYAALYNQPDCLKLLL 246

Query: 361 DSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
                + T  E+GETAL I+ K   +EC ++L +A A 
Sbjct: 247 KGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG 284

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 49.2 bits (117), Expect = 2e-06
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 6/93 (6%)

Query: 509 SGKTAIMLSELNQNCDLFEKVMLEFAL----EKGNRNAGGFYALHCAARRGDLDAVRLLT 564
             +  + L+    N       +++F +        + A G  ALH AA     D ++LL 
Sbjct: 189 PEELVLHLAVKVANQASL--PLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLL 246

Query: 565 SRGYGVNVPDGDGYTPLMLAAREGHGPMCELLI 597
                V   +  G T L +A ++ H    ELL 
Sbjct: 247 KGRALVGTVNEAGETALDIARKKHHKECEELLE 279

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 45.8 bits (108), Expect = 3e-05
 Identities = 24/100 (24%), Positives = 33/100 (33%), Gaps = 8/100 (8%)

Query: 82  TALFLAAHSGNVT---LVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGAS 137
             L LA    N     LV  ++  G  ++ K   G  A   A      + L++LLK  A 
Sbjct: 192 LVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRAL 251

Query: 138 QPACEE----ALLEASCHGQARLAELLMGSDLIRPHVAVH 173
                E    AL  A         ELL  +        +H
Sbjct: 252 VGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLH 291

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 44.2 bits (104), Expect = 9e-05
 Identities = 13/56 (23%), Positives = 30/56 (53%)

Query: 469 NLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCD 524
           +LD +  +G +A+  AA     +  + L+   A V  +N++G+TA+ ++    + +
Sbjct: 218 HLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKE 273

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 66.5 bits (162), Expect = 1e-11
 Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 6/112 (5%)

Query: 308 LHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFH---PIHLAARLGYST---IVQSLID 361
           L  AI      +V    + G D   P+     +      +HLA ++       +V  +I 
Sbjct: 136 LWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQ 195

Query: 362 SGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIA 413
           +G  L+ K   G TAL  +A Y Q +C+K+L K  A  G V+ +G++A  IA
Sbjct: 196 NGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIA 247

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 55.3 bits (133), Expect = 4e-08
 Identities = 25/87 (28%), Positives = 35/87 (40%), Gaps = 3/87 (3%)

Query: 539 NRNAGGFYALHCAARRGD---LDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCEL 595
           +  A     LH A +  +   L  V  +   G  ++    DG T L  AA        +L
Sbjct: 166 DAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKL 225

Query: 596 LISNGAVCDIKNARGETALSLARKNSS 622
           L+   A+    N  GETAL +ARK   
Sbjct: 226 LLKGRALVGTVNEAGETALDIARKKHH 252

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 43.7 bits (103), Expect = 2e-04
 Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 13/112 (11%)

Query: 496 LVYA-GADVKL------LNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGN----RNAGG 544
             +A G D              +  + L+   +  +     +++F ++ G     + A G
Sbjct: 150 EAFANGQDFGQPLPGPDAQAPEELVLHLAV--KVANQASLPLVDFIIQNGGHLDAKAADG 207

Query: 545 FYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELL 596
             ALH AA     D ++LL      V   +  G T L +A ++ H    ELL
Sbjct: 208 NTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELL 259

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 62.9 bits (152), Expect = 3e-10
 Identities = 92/658 (13%), Positives = 181/658 (27%), Gaps = 188/658 (28%)

Query: 13  DYEAEVSQRLLEATLAGD---LKSA--TECIADPYVDVNFVGAVSLKTRKTEV-----VL 62
             + E+ Q+ +E  L  +   L S   TE      +   ++          +V     V 
Sbjct: 73  SKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVS 132

Query: 63  REGKPSEVRVEFEEFKSDVTALFLAAH----SGNVTLVKKLLSTGADVNQKLFRGFATTI 118
           R     ++R    E +    A  +       SG   +   +  +     +  F+ F   +
Sbjct: 133 RLQPYLKLRQALLELRP---AKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNL 189

Query: 119 AVREGHLEILEIL--LKAGASQPACEEAL----LEASCH-GQARLAELLMGSDLIRPHVA 171
                   +LE+L  L           +     ++   H  QA L  LL      +P+  
Sbjct: 190 KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKS----KPYE- 244

Query: 172 VHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVS 231
            + L+         V+        ++   +     +       N+ C  L+    +R   
Sbjct: 245 -NCLL---------VLL-------NVQ--NAKAWNAF------NLSCKILL---TTRFKQ 276

Query: 232 VVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRM 291
           V   L    A T   + L   S              L      +             L  
Sbjct: 277 VTDFL---SAATTTHISLDHHSM------------TLTPDEVKSLLL--------KYLDC 313

Query: 292 LLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLG 351
             Q L    P                                   +    +P  L     
Sbjct: 314 RPQDL----PR----------------------------------EVLTTNPRRL----- 330

Query: 352 YSTIVQSLIDSGCDL-NTKTESGETALMISAKYKQEECVKVLAKAGA-----DFGL---- 401
            S I +S+ D      N K  + +    I      E  + VL  A          +    
Sbjct: 331 -SIIAESIRDGLATWDNWKHVNCDKLTTI-----IESSLNVLEPAEYRKMFDRLSVFPPS 384

Query: 402 VSVSGQSASSIAGSNWWSVGFQ--RAVLD-IIRSGNIPKSSNVAVFS----PLMFVAQAG 454
             +     S I    W+ V       V++ + +   + K    +  S     L    +  
Sbjct: 385 AHIPTILLSLI----WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLE 440

Query: 455 DIAAL-KALIGREELNLDYQDDNGFSAVMVAASKGHVE--VFRELVYAGADVKLLNKSGK 511
           +  AL ++++    +   + D +            +++   +  + +      L N    
Sbjct: 441 NEYALHRSIVDHYNIPKTF-DSDDLI-------PPYLDQYFYSHIGH-----HLKNI--- 484

Query: 512 TAIMLSELNQNCDLFEKVMLEFA-LEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGV 570
                 E  +   LF  V L+F  LE+  R+     A + +    +     L   + Y  
Sbjct: 485 ------EHPERMTLFRMVFLDFRFLEQKIRHDS--TAWNASGSILNT----LQQLKFYKP 532

Query: 571 NVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAE 628
            + D D     ++ A     P  E  +      D+        ++L  ++ ++  +A 
Sbjct: 533 YICDNDPKYERLVNAILDFLPKIEENLICSKYTDL------LRIALMAEDEAIFEEAH 584

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 6e-04
 Identities = 62/539 (11%), Positives = 146/539 (27%), Gaps = 172/539 (31%)

Query: 126 EILEILLKAGASQPACEEAL-LEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFV 184
           +IL +   A      C++   +  S   +  +  ++M  D          L         
Sbjct: 20  DILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKD---AVSGTLRLFWTLLSKQE 76

Query: 185 DVVDTLMKCGVDIN---ATDRLLLQSLKPSLHTNV----------DCSALVAAVVSRQVS 231
           ++V   ++  + IN       +  +  +PS+ T +          D        VSR   
Sbjct: 77  EMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQP 136

Query: 232 VVQL---LLQAGANTD-----MKVRLGAWSWDTTTGEEFRVGAG---LAE---------- 270
            ++L   LL+     +     +                   G+G   +A           
Sbjct: 137 YLKLRQALLELRPAKNVLIDGVL------------------GSGKTWVALDVCLSYKVQC 178

Query: 271 --PYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGA 328
              + I W  ++      ++L M LQ L Y       +   H+                 
Sbjct: 179 KMDFKIFWLNLKNCNSPETVLEM-LQKLLYQIDPNWTSRSDHS----------------- 220

Query: 329 DAQCPIRTQKTEFHPIHLAARLGYSTIVQSLI--------------DSGCD-LNTKTESG 373
            +   +R    +     L     Y      L+              +  C  L T     
Sbjct: 221 -SNIKLRIHSIQAELRRLLKSKPY---ENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQ 276

Query: 374 ETALMISAKYKQ---EECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDII 430
            T  + +A       +     L              +  S +    +         LD  
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPD-----------EVKSLLL--KY---------LD-C 313

Query: 431 RSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHV 490
           R  ++P+   V   +P   ++      +++  +   + N  + + +  + ++  +S   +
Sbjct: 314 RPQDLPRE--VLTTNPRR-LSIIA--ESIRDGLATWD-NWKHVNCDKLTTII-ESSLNVL 366

Query: 491 E------------VFRELVYAGADVKLLNKSGKTAIML-SELNQNCDLFEKVMLEFA--- 534
           E            VF           +         ++  ++ ++      V+ +     
Sbjct: 367 EPAEYRKMFDRLSVFPP------SAHI---PTILLSLIWFDVIKSDV--MVVVNKLHKYS 415

Query: 535 -LEKGNRNAGGFYALH-----CAARRGDLDAV--RLLTS----RGY---GVNVPDGDGY 578
            +EK  +      ++         +  +  A+   ++      + +    +  P  D Y
Sbjct: 416 LVEK--QPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQY 472

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	748
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	4e-42
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	5e-40
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-38
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-19
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-19
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	3e-19
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-08
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	4e-33
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	6e-25
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	4e-22
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-21
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	6e-12
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	6e-10
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-06
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	1e-27
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-17
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-15
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-13
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	5e-10
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	4e-24
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	5e-15
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	8e-09
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	7e-07
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	1e-06
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	2e-22
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	9e-14
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	2e-12
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	9e-11
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	6e-08
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	4e-07
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	3e-20
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	7e-20
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	4e-16
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	1e-10
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	9e-08
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	2e-07
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	5e-20
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	2e-19
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	3e-15
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	5e-13
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	2e-06
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	6e-06
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	2e-04
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-19
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-18
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	5e-14
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-09
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	6e-08
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-05
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-18
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	9e-12
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-11
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-06
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-04
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-04
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-16
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	5e-13
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	9e-12
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	7e-08
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	8e-07
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-05
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	3e-05
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	8e-04
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	2e-15
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	6e-11
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	1e-08
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	6e-05
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	5e-04
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	2e-09
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	6e-05
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	2e-09
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	4e-08
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	3e-06
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	4e-06
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	2e-05
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	0.003
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-09
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	4e-09
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	5e-09
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	6e-09
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-06
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	7e-06
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-04
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	4e-09
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	4e-08
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	6e-06
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	8e-06
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	4e-05
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	2e-04
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	0.004
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	1e-08
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	1e-07
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	2e-04
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	7e-04
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	8e-04
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	2e-07
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	6e-04
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	9e-04
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	0.001
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	3e-06

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (394), Expect = 4e-42
 Identities = 92/468 (19%), Positives = 171/468 (36%), Gaps = 79/468 (16%)

Query: 175 LVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQ 234
           L  A   G + +V  L++ G   N ++                 + L  A  +    V +
Sbjct: 4   LHVASFMGHLPIVKNLLQRGASPNVSN-------------VKVETPLHMAARAGHTEVAK 50

Query: 235 LLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQ 294
            LLQ  A  + K +                            CA        +++++LL+
Sbjct: 51  YLLQNKAKVNAKAKDDQTPL---------------------HCAARIGHT--NMVKLLLE 87

Query: 295 HLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYST 354
           + +  +           I         VL     +A     T K  F P+H+AA+ G   
Sbjct: 88  NNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMT-KKGFTPLHVAAKYGKVR 146

Query: 355 IVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAG 414
           + + L++     N   ++G T L ++  +   + VK+L   G      + +G +   I  
Sbjct: 147 VAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHI-- 204

Query: 415 SNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQD 474
                         +++ G    + +V   +PL   AQ G    +  L+ ++  N +  +
Sbjct: 205 --AAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQA-NGNLGN 261

Query: 475 DNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFA 534
            +G + + + A +GHV V   L+  G  V    + G T                      
Sbjct: 262 KSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTP--------------------- 300

Query: 535 LEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCE 594
                        LH A+  G++  V+ L      VN     GY+PL  AA++GH  +  
Sbjct: 301 -------------LHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVT 347

Query: 595 LLISNGAVCDIKNARGETALSLARKNSSMKNDAEL--VILDEVARMLV 640
           LL+ NGA  +  ++ G T L++A++     +  ++  V+ DE + +LV
Sbjct: 348 LLLKNGASPNEVSSDGTTPLAIAKRLGY-ISVTDVLKVVTDETSFVLV 394

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (379), Expect = 5e-40
 Identities = 68/301 (22%), Positives = 120/301 (39%), Gaps = 31/301 (10%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
           P+H+A+ +G+  IV++L+  G   N      ET L ++A+    E  K L +  A     
Sbjct: 3   PLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAK 62

Query: 403 SVSGQSASSIAGSN-----------------------------WWSVGFQRAVLDIIRSG 433
           +   Q+    A                                    G    VL ++   
Sbjct: 63  AKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKE 122

Query: 434 NIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVF 493
                     F+PL   A+ G +   + L+ R+  + +    NG + + VA    ++++ 
Sbjct: 123 ASQACMTKKGFTPLHVAAKYGKVRVAELLLERDA-HPNAAGKNGLTPLHVAVHHNNLDIV 181

Query: 494 RELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAAR 553
           + L+  G        +G T + ++   QN     + +L++       +  G   LH AA+
Sbjct: 182 KLLLPRGGSPHSPAWNGYTPLHIAA-KQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQ 240

Query: 554 RGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETA 613
            G  + V LL S+    N+ +  G TPL L A+EGH P+ ++LI +G + D     G T 
Sbjct: 241 EGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTP 300

Query: 614 L 614
           L
Sbjct: 301 L 301

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  145 bits (366), Expect = 2e-38
 Identities = 92/445 (20%), Positives = 160/445 (35%), Gaps = 57/445 (12%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPA 140
           T L +A+  G++ +VK LL  GA  N    +      +A R GH E+ + LL+  A   A
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61

Query: 141 CEE----ALLEASCHGQARLAELL---MGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKC 193
             +     L  A+  G   + +LL     +  +        L  A   G V+ V  L++ 
Sbjct: 62  KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 121

Query: 194 GVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWS 253
                                    + L  A    +V V +LLL+  A+ +   + G   
Sbjct: 122 EASQACMT-------------KKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTP 168

Query: 254 WDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQH-LSYNSP-HYGRTLLHHA 311
                                   AV +  +   I+++LL    S +SP   G T LH A
Sbjct: 169 L---------------------HVAVHHNNL--DIVKLLLPRGGSPHSPAWNGYTPLHIA 205

Query: 312 ILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTE 371
                      LL  G  A        T   P+HLAA+ G++ +V  L+    + N   +
Sbjct: 206 AKQNQVEVARSLLQYGGSANAESVQGVT---PLHLAAQEGHAEMVALLLSKQANGNLGNK 262

Query: 372 SGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIR 431
           SG T L + A+        VL K G      +  G +   +        G  + V  +++
Sbjct: 263 SGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHV----ASHYGNIKLVKFLLQ 318

Query: 432 SGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGH-- 489
                 +     +SPL   AQ G    +  L+ +   + +    +G + + +A   G+  
Sbjct: 319 HQADVNAKTKLGYSPLHQAAQQGHTDIVTLLL-KNGASPNEVSSDGTTPLAIAKRLGYIS 377

Query: 490 -VEVFRELVYAGADVKLLNKSGKTA 513
             +V + +    + V + +K   + 
Sbjct: 378 VTDVLKVVTDETSFVLVSDKHRMSF 402

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.0 bits (222), Expect = 1e-19
 Identities = 61/310 (19%), Positives = 95/310 (30%), Gaps = 48/310 (15%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRG-FATTIAVREGHLEILEILLKAGA 136
           K   T L +AA  G V + + LL   A  N     G     +AV   +L+I+++LL  G 
Sbjct: 130 KKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGG 189

Query: 137 SQPACEE----ALLEASCHGQARLAELLMGSDLIRPHVAVH---SLVTACCRGFVDVVDT 189
           S  +        L  A+   Q  +A  L+         +V     L  A   G  ++V  
Sbjct: 190 SPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVAL 249

Query: 190 LMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRL 249
           L+    + N  +                 + L        V V  +L++ G   D     
Sbjct: 250 LLSKQANGNLGN-------------KSGLTPLHLVAQEGHVPVADVLIKHGVMVD----- 291

Query: 250 GAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLH 309
            A +    T        G  +                                 G + LH
Sbjct: 292 -ATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKT---------------KLGYSPLH 335

Query: 310 HAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSL---IDSGCDL 366
            A   G T  V +LL  GA          T   P+ +A RLGY ++   L    D    +
Sbjct: 336 QAAQQGHTDIVTLLLKNGASPNEVSSDGTT---PLAIAKRLGYISVTDVLKVVTDETSFV 392

Query: 367 NTKTESGETA 376
               +   + 
Sbjct: 393 LVSDKHRMSF 402

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.3 bits (220), Expect = 2e-19
 Identities = 72/348 (20%), Positives = 107/348 (30%), Gaps = 53/348 (15%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGAS 137
           K D T L  AA  G+  +VK LL   A+ N     G                        
Sbjct: 64  KDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGH--------------------TPL 103

Query: 138 QPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDI 197
             A  E  +E       + A     +           L  A   G V V + L++     
Sbjct: 104 HIAAREGHVETVLALLEKEASQACMTKKGF-----TPLHVAAKYGKVRVAELLLERDAHP 158

Query: 198 NATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLG--AWSWD 255
           NA                   + L  AV    + +V+LLL  G +       G       
Sbjct: 159 NAAG-------------KNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIA 205

Query: 256 TTTGEEFRVGAGLAEPYAITWC----------AVEYFEITGSILRMLLQHLSYNSPHYGR 305
               +     + L    +              A +        L +  Q         G 
Sbjct: 206 AKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGL 265

Query: 306 TLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCD 365
           T LH     G      VL+  G       R   T   P+H+A+  G   +V+ L+    D
Sbjct: 266 TPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYT---PLHVASHYGNIKLVKFLLQHQAD 322

Query: 366 LNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIA 413
           +N KT+ G + L  +A+    + V +L K GA    VS  G +  +IA
Sbjct: 323 VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIA 370

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.5 bits (218), Expect = 3e-19
 Identities = 27/84 (32%), Positives = 38/84 (45%)

Query: 547 ALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIK 606
            LH A+  G L  V+ L  RG   NV +    TPL +AAR GH  + + L+ N A  + K
Sbjct: 3   PLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAK 62

Query: 607 NARGETALSLARKNSSMKNDAELV 630
               +T L  A +         L+
Sbjct: 63  AKDDQTPLHCAARIGHTNMVKLLL 86

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (131), Expect = 2e-08
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 11/79 (13%)

Query: 579 TPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARM 638
           TPL +A+  GH P+ + L+  GA  ++ N + ET L +A +              EVA+ 
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHT----------EVAKY 51

Query: 639 LVLGGGHVLKHTKGGKGTP 657
           L+     V    K  + TP
Sbjct: 52  LLQNKAKVNAKAKDDQ-TP 69

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (318), Expect = 4e-33
 Identities = 71/281 (25%), Positives = 118/281 (41%), Gaps = 19/281 (6%)

Query: 342 HPIHLAARLGYSTIVQSLIDSGCDLNTKT-ESGETALMISAKYKQEECVKVLAKAGADFG 400
           H +  A +     +VQ L++ G ++N +  E G T L  + +  +E+ V++L + GAD  
Sbjct: 7   HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV 66

Query: 401 LVSVSGQSASSIA--------GSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQ 452
           L   +G +   +A           + S G      D        ++   AV+  +  +  
Sbjct: 67  LRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEA---AVYGKVKALKF 123

Query: 453 AGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELV-YAGADVKLLNKSGK 511
                A   L  + + + +     G +A+M AA KGHVEV + L+   GADV   +  G+
Sbjct: 124 LYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR 183

Query: 512 TAIMLSELNQNCDLFEKVMLEFALEKG----NRNAGGFYALHCAARRGDLDAVR-LLTSR 566
            A++ + L+ +    E +     L+ G     R   G   L  A  +  L  V+ LL   
Sbjct: 184 NALIHALLSSDDSDVEAIT-HLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE 242

Query: 567 GYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKN 607
              +N  D DG T L+LA       + ELL   GA  D  +
Sbjct: 243 HIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (257), Expect = 6e-25
 Identities = 57/281 (20%), Positives = 112/281 (39%), Gaps = 12/281 (4%)

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSG 363
              LL  A+       V  LL  GA+     + ++  + P+H A ++    IV+ L+  G
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLLEGGANVN--FQEEEGGWTPLHNAVQMSREDIVELLLRHG 62

Query: 364 CDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQ 423
            D   + ++G T  +++A     + +K+    GAD       G +A   A         +
Sbjct: 63  ADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALK 122

Query: 424 RAVL------DIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNG 477
                        ++    +       + LM  A+ G +  LK L+     +++  D+ G
Sbjct: 123 FLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMG 182

Query: 478 FSAVMVA----ASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEF 533
            +A++ A           +   L+  GADV +  + GKT ++L+   ++  L ++++ + 
Sbjct: 183 RNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQE 242

Query: 534 ALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPD 574
            +E  + ++ G  AL  A          LL  RG   +  D
Sbjct: 243 HIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.0 bits (235), Expect = 4e-22
 Identities = 64/303 (21%), Positives = 106/303 (34%), Gaps = 38/303 (12%)

Query: 80  DVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFAT--TIAVREGHLEILEILLKAGAS 137
           D   L  A  + +V LV++LL  GA+VN +   G  T    AV+    +I+E+LL+ GA 
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD 64

Query: 138 QPACEEALLE----ASCHGQARLAELLMGSDLIRPHVAVH---SLVTACCRGFVDVVDTL 190
               ++        A+  G  +L +L +           +   + + A   G V  +  L
Sbjct: 65  PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFL 124

Query: 191 MKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL-QAGANTDMKVRL 249
            K G ++N   +                +AL+ A     V V+++LL + GA+ +    +
Sbjct: 125 YKRGANVNLRRK---TKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNM 181

Query: 250 GAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQH-LSYNSP-HYGRTL 307
           G  +                                 +I  +LL H    N     G+T 
Sbjct: 182 GRNALI-------------------HALLSSDDSDVEAITHLLLDHGADVNVRGERGKTP 222

Query: 308 LHHAILCGCTGAVAVLLS-CGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDL 366
           L  A+     G V  LL     +        KT    + LA  L    I + L   G   
Sbjct: 223 LILAVEKKHLGLVQRLLEQEHIEINDTDSDGKT---ALLLAVELKLKKIAELLCKRGAST 279

Query: 367 NTK 369
           +  
Sbjct: 280 DCG 282

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.1 bits (230), Expect = 2e-21
 Identities = 60/332 (18%), Positives = 114/332 (34%), Gaps = 60/332 (18%)

Query: 173 HSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSV 232
           H L+ A     VD+V  L++ G ++N  +                 + L  AV   +  +
Sbjct: 7   HLLIKAVQNEDVDLVQQLLEGGANVNFQE------------EEGGWTPLHNAVQMSREDI 54

Query: 233 VQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRML 292
           V+LLL+ GA+  ++ + GA  +                       A     +    L + 
Sbjct: 55  VELLLRHGADPVLRKKNGATPF---------------------LLAAIAGSVKLLKLFLS 93

Query: 293 LQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGY 352
                     YG T    A + G   A+  L   GA+     +T+               
Sbjct: 94  KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTK--------------- 138

Query: 353 STIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVL-AKAGADFGLVSVSGQSASS 411
                       D     + G TALM +A+    E +K+L  + GAD       G++A  
Sbjct: 139 -----------EDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALI 187

Query: 412 IAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLD 471
            A  +      +     ++  G           +PL+   +   +  ++ L+ +E + ++
Sbjct: 188 HALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN 247

Query: 472 YQDDNGFSAVMVAASKGHVEVFRELVYAGADV 503
             D +G +A+++A      ++   L   GA  
Sbjct: 248 DTDSDGKTALLLAVELKLKKIAELLCKRGAST 279

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.6 bits (156), Expect = 6e-12
 Identities = 53/261 (20%), Positives = 89/261 (34%), Gaps = 59/261 (22%)

Query: 445 SPLMFVAQAGDIAALKALIGREELNLDYQDD-NGFSAVMVAASKGHVEVFRELVY----- 498
             L+   Q  D+  ++ L+     N+++Q++  G++ +  A      ++   L+      
Sbjct: 7   HLLIKAVQNEDVDLVQQLL-EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP 65

Query: 499 ----------------------------AGADVKLLNKSGKTAIMLSELNQNCDLFEKVM 530
                                        GADV   +  G TA M + +       + + 
Sbjct: 66  VLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLY 125

Query: 531 LEFALEKGNR---------NAGGFYALHCAARRGDLDAVR-LLTSRGYGVNVPDGDGYTP 580
              A     R           GG  AL  AA +G ++ ++ LL   G  VN  D  G   
Sbjct: 126 KRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNA 185

Query: 581 LMLAAREGHGPMCE----LLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVA 636
           L+ A         E    LL+ +GA  +++  RG+T L LA +            L  V 
Sbjct: 186 LIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKH---------LGLVQ 236

Query: 637 RMLVLGGGHVLKHTKGGKGTP 657
           R+L      +      GK T 
Sbjct: 237 RLLEQEHIEINDTDSDGK-TA 256

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.8 bits (141), Expect = 6e-10
 Identities = 34/134 (25%), Positives = 47/134 (35%), Gaps = 14/134 (10%)

Query: 82  TALFLAAHSGNVTLVKKLLS-TGADVNQKLFRGFATTIAV-----REGHLEILEILLKAG 135
           TAL  AA  G+V ++K LL   GADVN     G    I             I  +LL  G
Sbjct: 150 TALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG 209

Query: 136 ASQPACEE----ALLEASCHGQARLAELLMGSDLIRPHVAVHS----LVTACCRGFVDVV 187
           A      E     L+ A       L + L+  + I  +         L+ A       + 
Sbjct: 210 ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIA 269

Query: 188 DTLMKCGVDINATD 201
           + L K G   +  D
Sbjct: 270 ELLCKRGASTDCGD 283

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 2e-06
 Identities = 33/147 (22%), Positives = 52/147 (35%), Gaps = 35/147 (23%)

Query: 474 DDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEF 533
           +DN    ++ A     V++ ++L+  GA+V                              
Sbjct: 4   EDN--HLLIKAVQNEDVDLVQQLLEGGANVNFQE-------------------------- 35

Query: 534 ALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMC 593
                    GG+  LH A +    D V LL   G    +   +G TP +LAA  G   + 
Sbjct: 36  -------EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLL 88

Query: 594 ELLISNGAVCDIKNARGETALSLARKN 620
           +L +S GA  +  +  G TA   A   
Sbjct: 89  KLFLSKGADVNECDFYGFTAFMEAAVY 115

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  112 bits (281), Expect = 1e-27
 Identities = 42/298 (14%), Positives = 80/298 (26%), Gaps = 36/298 (12%)

Query: 322 VLLSCGADAQCPIRTQKTEFH--------PIHLAARLGYSTI---VQSLIDSGCDLNTKT 370
           +L    A      +   ++ H           +AA  G S+    +  L+ S   +    
Sbjct: 64  LLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQ 123

Query: 371 ESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSI-AGSNWWSVGFQRAVLDI 429
                A  ++A+      +  L +      +  +  ++  +    +    +     + ++
Sbjct: 124 AENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCEL 183

Query: 430 IRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGH 489
             +           ++        G    +  L+                A +     G 
Sbjct: 184 APTEATAMIQAENYYAFRWAAVGRGHHNVINFLLD--------CPVMLAYAEIHEFEYGE 235

Query: 490 VEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALH 549
             V   +           K    A  LS  +   DL  K        +  +       L 
Sbjct: 236 KYVNPFIARHVNR----LKEMHDAFKLSNPDGVFDLVTK-------SECLQGFYMLRNLI 284

Query: 550 CAARRGDLDAVRLLTSRGY-----GVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV 602
                  LD +R L S              GD    L LA R G+   C LL+S  +V
Sbjct: 285 RRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSV 342

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 82.2 bits (202), Expect = 2e-17
 Identities = 37/239 (15%), Positives = 58/239 (24%), Gaps = 37/239 (15%)

Query: 440 NVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYA 499
           N      L  +         +  I   EL+L          + +  +K   +V + L   
Sbjct: 9   NYENDPQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLY 68

Query: 500 GADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDA 559
            A      K   +                           +          AA  G   A
Sbjct: 69  YAHYNRNAKQLWSDAH-----------------------KKGIKSEVICFVAAITGCSSA 105

Query: 560 ---VRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNAR--GETAL 614
              + LL +    V V   + Y    LAA  GH  +   L        +   +     A 
Sbjct: 106 LDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAF 165

Query: 615 SLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHRKDIRMLGSEGVLRW 673
            LA         AE   L  + R+  L         +       R      G   V+ +
Sbjct: 166 RLA---------AENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINF 215

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 76.1 bits (186), Expect = 2e-15
 Identities = 45/269 (16%), Positives = 82/269 (30%), Gaps = 43/269 (15%)

Query: 82  TALFLAAHSGN---VTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGAS 137
              F+AA +G    +  +  LL++   V       + A  +A   GHL +L  L +   +
Sbjct: 92  VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPT 151

Query: 138 QPAC------EEALLEASCHGQARLAELLM--GSDLIRPHVAVHS----LVTACCRGFVD 185
           +           A   A+ +G   +   L           +   +       A  RG  +
Sbjct: 152 EIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHN 211

Query: 186 VVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDM 245
           V++ L+ C V +   +           +     +  +A  V+R   +      +  +   
Sbjct: 212 VINFLLDCPVMLAYAEIHE------FEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVF 265

Query: 246 KVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYN------ 299
            +   +                L   Y +        E+    +R LL            
Sbjct: 266 DLVTKS--------------ECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTA 311

Query: 300 -SPHYGRTLLHHAILCGCTGAVAVLLSCG 327
             P     LL  A+  G  GA A+LLS  
Sbjct: 312 TIPGDANELLRLALRLGNQGACALLLSIP 340

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 69.9 bits (170), Expect = 2e-13
 Identities = 29/330 (8%), Positives = 68/330 (20%), Gaps = 93/330 (28%)

Query: 175 LVTACCRGFVDVVDT---LMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVS 231
              A   G    +DT   L+     +                   +  A   A  +  + 
Sbjct: 94  CFVAAITGCSSALDTLCLLLTSDEIVKVIQ-------------AENYQAFRLAAENGHLH 140

Query: 232 VVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRM 291
           V+  L +      M                                              
Sbjct: 141 VLNRLCELAPTEIMA--------------------------------------------- 155

Query: 292 LLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLG 351
                              A   G    +  L          +   +  +     A   G
Sbjct: 156 -------MIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRG 208

Query: 352 YSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASS 411
           +  ++  L+D    L         A +   +Y ++     +A+              A  
Sbjct: 209 HHNVINFLLDCPVMLA-------YAEIHEFEYGEKYVNPFIARHVNRLK----EMHDAFK 257

Query: 412 IAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIG----REE 467
           ++  +         V D++            +   L+       +  ++ L+     +  
Sbjct: 258 LSNPD--------GVFDLV--TKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKAL 307

Query: 468 LNLDYQDDNGFSAVMVAASKGHVEVFRELV 497
                   +    + +A   G+      L+
Sbjct: 308 APTATIPGDANELLRLALRLGNQGACALLL 337

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 59.5 bits (143), Expect = 5e-10
 Identities = 34/289 (11%), Positives = 67/289 (23%), Gaps = 79/289 (27%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT---IAVREGHLEILEILLKA 134
             +  A  LAA +G++ ++ +L          + +        +A   GHL +L  L + 
Sbjct: 124 AENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCEL 183

Query: 135 GASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCG 194
             ++          + +  A                       A  RG  +V++ L+ C 
Sbjct: 184 APTEATAM----IQAENYYAF-------------------RWAAVGRGHHNVINFLLDCP 220

Query: 195 VDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSW 254
           V +   +           +     +  +A  V+R   +      +  +    +       
Sbjct: 221 VMLAYAEIHE------FEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLV------ 268

Query: 255 DTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILC 314
                                                           Y    L      
Sbjct: 269 ---------------------------------------TKSECLQGFYMLRNLIRRNDE 289

Query: 315 GCTGAVAVLLSCGAD--AQCPIRTQKTEFHPIHLAARLGYSTIVQSLID 361
                +  LLS                    + LA RLG       L+ 
Sbjct: 290 VLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLS 338

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  100 bits (250), Expect = 4e-24
 Identities = 41/275 (14%), Positives = 82/275 (29%), Gaps = 23/275 (8%)

Query: 343 PIHLA-ARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLA-------- 393
           PI L     G   I + +     ++        T L   A     E  + L         
Sbjct: 3   PIKLHTEAAGSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECI 61

Query: 394 KAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQA 453
            AGAD   +     +   +A                  +     + +           + 
Sbjct: 62  AAGADVNAMDCDENTPLMLAVLARRRRLVAYL--MKAGADPTIYNKSERSALHQAAANRD 119

Query: 454 GDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHV-----------EVFRELVYAGAD 502
             +        + + +++  D NG +A+M+ A                +  +      A 
Sbjct: 120 FGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAAR 179

Query: 503 VKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRL 562
                  G+TA+  +    N  + + ++ E    K  ++  G   +  AA+ G ++ V  
Sbjct: 180 KDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMY 239

Query: 563 LTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLI 597
           L  +G  V   D   +T   LA    H  + ++  
Sbjct: 240 LIQQGASVEAVDATDHTARQLAQANNHHNIVDIFD 274

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 74.0 bits (180), Expect = 5e-15
 Identities = 35/316 (11%), Positives = 72/316 (22%), Gaps = 43/316 (13%)

Query: 82  TALFLA-AHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPA 140
           + + L    +G+  + + +     ++                   E  E L+   A +  
Sbjct: 2   SPIKLHTEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECI 61

Query: 141 CEEALLE-ASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINA 199
              A +    C     L   ++          + +          +              
Sbjct: 62  AAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAA------ 115

Query: 200 TDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTG 259
                                      +R   ++  +L +         L          
Sbjct: 116 --------------------------ANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMI 149

Query: 260 EEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGA 319
                G        +        +  G            +  + GRT LH+A        
Sbjct: 150 VAHNEGRDQVASAKLLVEKGAKVDYDG-------AARKDSEKYKGRTALHYAAQVSNMPI 202

Query: 320 VAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMI 379
           V      G       +  +    PI LAA+ G   +V  LI  G  +     +  TA  +
Sbjct: 203 VKY--LVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQL 260

Query: 380 SAKYKQEECVKVLAKA 395
           +        V +  + 
Sbjct: 261 AQANNHHNIVDIFDRC 276

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 55.1 bits (131), Expect = 8e-09
 Identities = 18/76 (23%), Positives = 23/76 (30%), Gaps = 12/76 (15%)

Query: 548 LHCAARRGDLDAVRLLTSRGYGVNVPDG-DGYTPLMLAAREGHGPMCELL--------IS 598
           LH  A  G       +T     VN+ D     T L   A        E L        I+
Sbjct: 6   LHTEAA-GSYAITEPITRES--VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIA 62

Query: 599 NGAVCDIKNARGETAL 614
            GA  +  +    T L
Sbjct: 63  AGADVNAMDCDENTPL 78

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 49.3 bits (116), Expect = 7e-07
 Identities = 39/303 (12%), Positives = 71/303 (23%), Gaps = 45/303 (14%)

Query: 58  TEVVLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATT 117
           TE + RE       V   + + + T L   A + +    + L+   A             
Sbjct: 17  TEPITRES------VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEA------------- 57

Query: 118 IAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVT 177
                      +  + AGA        +    C     L   ++          + +   
Sbjct: 58  -----------KECIAAGAD-------VNAMDCDENTPLMLAVLARRRRLVAYLMKAGAD 99

Query: 178 ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL 237
                  +                  +L S K            + A++    +  +  +
Sbjct: 100 PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQV 159

Query: 238 QAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLS 297
            +      K     +        E   G       A+ + A          L        
Sbjct: 160 ASAKLLVEKGAKVDYDGAARKDSEKYKGR-----TALHYAAQVSNMPIVKYLVGEKGSNK 214

Query: 298 YNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQ 357
                 G+T +  A   G    V  L+  GA  +    T  T      LA    +  IV 
Sbjct: 215 DKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHT---ARQLAQANNHHNIVD 271

Query: 358 SLI 360
              
Sbjct: 272 IFD 274

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 48.2 bits (113), Expect = 1e-06
 Identities = 36/331 (10%), Positives = 83/331 (25%), Gaps = 63/331 (19%)

Query: 178 ACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLL 237
               G   + + + +  V+I                   + + L     +      + L+
Sbjct: 8   TEAAGSYAITEPITRESVNII--------------DPRHNRTVLHWIASNSSAEKSEDLI 53

Query: 238 QAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLS 297
              A   +    GA        E   +   +          +       +I     +   
Sbjct: 54  VHEAKECIA--AGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSAL 111

Query: 298 YNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQ 357
           + +       +   +L        +           +     E      +A+L      +
Sbjct: 112 HQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAK 171

Query: 358 SLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNW 417
              D     +++   G TAL  +A+      VK                           
Sbjct: 172 VDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKY-------------------------- 205

Query: 418 WSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNG 477
                      +   G+     +    +P+M  AQ G I  +  LI +   +++  D   
Sbjct: 206 ----------LVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ-GASVEAVDATD 254

Query: 478 FSAVMVAASKGHVEVFRELVYAGADVKLLNK 508
            +A  +A +  H  +          V + ++
Sbjct: 255 HTARQLAQANNHHNI----------VDIFDR 275

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 95.5 bits (236), Expect = 2e-22
 Identities = 41/262 (15%), Positives = 80/262 (30%), Gaps = 27/262 (10%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCD---LNTKTESGETALMISAKYKQEECVKVLAKAGADF 399
            +HLA    +   +  L+        L+ + + G+TAL ++A   +   V+ L  AGA  
Sbjct: 12  ALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGV 71

Query: 400 GLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAAL 459
            +    G +A  +A                                  + +         
Sbjct: 72  LVAERGGHTALHLACRVRA--------HTCAC----------------VLLQPRPSHPRD 107

Query: 460 KALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSEL 519
            +     +      D +   A + +      E           ++  N  G T + ++ +
Sbjct: 108 ASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVI 167

Query: 520 NQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYT 579
           +++ ++   +    A         G   LH A        + LL   G         G T
Sbjct: 168 HKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRT 227

Query: 580 PLMLAAREGHGPMCELLISNGA 601
           PL  A    +  +  LL ++GA
Sbjct: 228 PLGSALLRPNPILARLLRAHGA 249

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.7 bits (169), Expect = 9e-14
 Identities = 41/261 (15%), Positives = 67/261 (25%), Gaps = 34/261 (13%)

Query: 118 IAVREGHLEILEILLKAGASQPACEE-------ALLEASCHGQARLAELLMGSDLIRPHV 170
           +AV   H   L+ LL   A     +        AL  A+  G+A   E L  +       
Sbjct: 15  LAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVA 74

Query: 171 AVHSLVT---ACCRGFVDVVDTLMKCGVDINA-TDRLLLQSLKPSLHTNVDCSALVAAVV 226
                     AC          L++             L   +          A V +  
Sbjct: 75  ERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQP 134

Query: 227 SRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITG 286
           + +              + +   G                       +    +       
Sbjct: 135 NPENEEEPRDEDWRLQLEAENYDG--------------------HTPLHVAVIHKDAEMV 174

Query: 287 SILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHL 346
            +LR     L+   P  GRT LH A+       + +LL  GAD    +   +T   P+  
Sbjct: 175 RLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRT---PLGS 231

Query: 347 AARLGYSTIVQSLIDSGCDLN 367
           A       + + L   G    
Sbjct: 232 ALLRPNPILARLLRAHGAPEP 252

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 65.9 bits (159), Expect = 2e-12
 Identities = 36/249 (14%), Positives = 63/249 (25%), Gaps = 59/249 (23%)

Query: 444 FSPLMFVAQAGDIAALKALI--GREELNLDYQDDNGFSAVMVAASKGHVEVFRELV---- 497
            + L           L  L+        LD Q+D G +A+ +AA  G      +L     
Sbjct: 10  DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGA 69

Query: 498 ---------YAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYAL 548
                    +    +    ++   A +L +   +             +    +     A 
Sbjct: 70  GVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAA 129

Query: 549 HCAARRGDLDAVRLLTSRGYGVNVPDGDG------------------------------- 577
             +    + +           +   + DG                               
Sbjct: 130 VDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEP 189

Query: 578 ---YTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDE 634
               TPL LA       + ELL+  GA    +   G T L  A    +            
Sbjct: 190 TCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPN----------PI 239

Query: 635 VARMLVLGG 643
           +AR+L   G
Sbjct: 240 LARLLRAHG 248

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 60.9 bits (146), Expect = 9e-11
 Identities = 36/234 (15%), Positives = 69/234 (29%), Gaps = 26/234 (11%)

Query: 288 ILRMLLQHLSYNSP-----HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFH 342
            L  LL   + +         G+T LH A + G    V  L + G      +  ++    
Sbjct: 24  FLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAG---AGVLVAERGGHT 80

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLN--------------TKTESGETALMISAKYKQEEC 388
            +HLA R+   T    L+                     T   S   A + S    + E 
Sbjct: 81  ALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEE 140

Query: 389 VKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLM 448
                         +  G +   +A  +  +   +              +      +PL 
Sbjct: 141 EPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCG---RTPLH 197

Query: 449 FVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGAD 502
              +A   + L+ L+ +   +   +   G + +  A  + +  + R L   GA 
Sbjct: 198 LAVEAQAASVLELLL-KAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAP 250

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.0 bits (123), Expect = 6e-08
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%)

Query: 574 DGDGYTPLMLAAREGHGPMCELLISNGA---VCDIKNARGETALSLARKN 620
             DG T L LA    H P  + L+   A     D++N  G+TAL LA   
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAIL 55

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.7 bits (117), Expect = 4e-07
 Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQP 139
           T L LA  +   ++++ LL  GAD   +++ G      A+   +  +  +L   GA +P
Sbjct: 194 TPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEP 252

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 89.7 bits (221), Expect = 3e-20
 Identities = 36/286 (12%), Positives = 83/286 (29%), Gaps = 30/286 (10%)

Query: 305 RTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGC 364
              L   +          L +  ++         +     H++       +  +  ++  
Sbjct: 40  EAFLQRLLFPEIQEMPTSLNNDSSNRNS--EGGSSNQQQQHVSFDSLLQEVNDAFPNTQL 97

Query: 365 DLNTKT-ESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQ 423
           +LN    E G T L         E VK L K G++       G+S    A  +  +    
Sbjct: 98  NLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSG 157

Query: 424 RAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMV 483
                +          +    + L  +     +                           
Sbjct: 158 TFEALLDYLYPCLILEDSMNRTILHHIIITSGMTG-----------------------CS 194

Query: 484 AASKGHVEVFRELV--YAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG--N 539
           AA+K ++++    +       ++      ++        +   + E + L++ +      
Sbjct: 195 AAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNA 254

Query: 540 RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAA 585
           +++ G   L+ AAR G++  V  L   G    + +  G  P+   A
Sbjct: 255 QDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 88.6 bits (218), Expect = 7e-20
 Identities = 30/215 (13%), Positives = 69/215 (32%), Gaps = 53/215 (24%)

Query: 456 IAALKALIGREELNLDYQ-DDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAI 514
           +  +       +LNL+   D++G + +    S  ++E+ + LV  G++    +  G++ +
Sbjct: 85  LQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCL 144

Query: 515 MLSELNQNC--------------------------------------------DLFEKVM 530
           + +  + N                                               +  ++
Sbjct: 145 VKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDIL 204

Query: 531 LEFALEKGN-----RNAGGFYALHCAARRGDLDAVRLLTSR---GYGVNVPDGDGYTPLM 582
           + + ++K N              +          +  L  +      +N  D +G T L 
Sbjct: 205 MGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLN 264

Query: 583 LAAREGHGPMCELLISNGAVCDIKNARGETALSLA 617
           +AAR G+  + + L+  GA   I N  G   +   
Sbjct: 265 IAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 299

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 77.4 bits (189), Expect = 4e-16
 Identities = 36/217 (16%), Positives = 65/217 (29%), Gaps = 29/217 (13%)

Query: 303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDS 362
           +G T LH          V  L+  G++        ++       +     S   ++L+D 
Sbjct: 106 HGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDY 165

Query: 363 -GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVG 421
               L  +     T L               AK   D  +                    
Sbjct: 166 LYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGW------------------ 207

Query: 422 FQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREEL---NLDYQDDNGF 478
                  I++  N P  S                  ++   +  + +    L+ QD NG 
Sbjct: 208 -------IVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGD 260

Query: 479 SAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIM 515
           + + +AA  G++ +   L+  GAD  + NKSG   + 
Sbjct: 261 TCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVD 297

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 61.2 bits (147), Expect = 1e-10
 Identities = 34/209 (16%), Positives = 56/209 (26%), Gaps = 30/209 (14%)

Query: 218 CSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWC 277
            + L        + +V+ L++ G+N               +                   
Sbjct: 108 NTPLHWLTSIANLELVKHLVKHGSNRL------YGDNMGES-----------CLVKAVKS 150

Query: 278 AVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQC----- 332
              Y   T   L   L           RT+LHH I+       +       D        
Sbjct: 151 VNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVK 210

Query: 333 ----PIRTQKTEFHPIHLAARLGYSTIVQSLIDS----GCDLNTKTESGETALMISAKYK 384
               PI++   E               +   +D        LN +  +G+T L I+A+  
Sbjct: 211 KQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLG 270

Query: 385 QEECVKVLAKAGADFGLVSVSGQSASSIA 413
               V  L   GAD  + + SG       
Sbjct: 271 NISIVDALLDYGADPFIANKSGLRPVDFG 299

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 52.4 bits (124), Expect = 9e-08
 Identities = 27/184 (14%), Positives = 52/184 (28%), Gaps = 15/184 (8%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVN----QKLFRGFATTIAVREGHLEILEILLKAGAS 137
           T L       N+ LVK L+  G++                 +V        E LL     
Sbjct: 109 TPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYP 168

Query: 138 QPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVD-----TLMK 192
               E+++     H     + +   S   + ++ +        +            +   
Sbjct: 169 CLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPN 228

Query: 193 CGVDINATDRLLLQSLKPSLHTNVDC------SALVAAVVSRQVSVVQLLLQAGANTDMK 246
                     L    LK  +   ++       + L  A     +S+V  LL  GA+  + 
Sbjct: 229 DKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIA 288

Query: 247 VRLG 250
            + G
Sbjct: 289 NKSG 292

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 50.8 bits (120), Expect = 2e-07
 Identities = 15/103 (14%), Positives = 36/103 (34%), Gaps = 1/103 (0%)

Query: 519 LNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVP-DGDG 577
             +  ++   +  + +       +      H +      +      +    +N+P D  G
Sbjct: 48  FPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHG 107

Query: 578 YTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKN 620
            TPL       +  + + L+ +G+     +  GE+ L  A K+
Sbjct: 108 NTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKS 150

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 89.0 bits (219), Expect = 5e-20
 Identities = 59/277 (21%), Positives = 104/277 (37%), Gaps = 15/277 (5%)

Query: 345 HLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSV 404
            L   +G  T ++  +        K + G    + +      E V  L + GAD    +V
Sbjct: 13  QLKRWIGSETDLEPPVVKRKKTKVKFDDG-AVFLAACSSGDTEEVLRLLERGADINYANV 71

Query: 405 SGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIG 464
            G +A   A  +         V  ++ +G      +   + PL   A  G +   + LI 
Sbjct: 72  DGLTALHQACID----DNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLIS 127

Query: 465 REELNLDYQDDNGFSAVMVAASKGHVEVFRELVYA-GADVKLLNKSGKTAIMLSELNQNC 523
           +        +  G + + +A  +   E+ +  V   G D++   K  +  ++        
Sbjct: 128 QGAHV-GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLN 186

Query: 524 DLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLML 583
                 +             G  ALH AA +G  + ++LL    Y VN+ D DG+TPL  
Sbjct: 187 SGHINDV--------RHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHA 238

Query: 584 AAREGHGPMCELLISNGAVCDIKNARGETALSLARKN 620
           AA  G    C +L+ N    +  N  G+TA  +A ++
Sbjct: 239 AAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADED 275

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 87.1 bits (214), Expect = 2e-19
 Identities = 47/254 (18%), Positives = 90/254 (35%), Gaps = 12/254 (4%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
               A   G +  V  L++ G D+N     G TAL  +      + VK L + GA+    
Sbjct: 43  VFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQP 102

Query: 403 SVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKAL 462
              G      A S  +    +     +I  G    + N    +PL    +      L+  
Sbjct: 103 DNEGWIPLHAAASCGYLDIAEY----LISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNE 158

Query: 463 IGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQN 522
           + R+ ++++                   +  + L     +     KSG TA+ ++     
Sbjct: 159 VNRQGVDIEAARKEEER-------IMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGY 211

Query: 523 CDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLM 582
            ++ + ++     +   ++  G+  LH AA  G  +A R+L      +   +  G T   
Sbjct: 212 TEVLKLLIQARY-DVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFD 270

Query: 583 LAAREGHGPMCELL 596
           +A  +  G + EL 
Sbjct: 271 VADEDILGYLEELQ 284

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 74.8 bits (182), Expect = 3e-15
 Identities = 49/245 (20%), Positives = 88/245 (35%), Gaps = 16/245 (6%)

Query: 175 LVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQ 234
            + AC  G  + V  L++ G DIN  +                 +AL  A +   V +V+
Sbjct: 44  FLAACSSGDTEEVLRLLERGADINYAN-------------VDGLTALHQACIDDNVDMVK 90

Query: 235 LLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEY---FEITGSILRM 291
            L++ GAN +     G           +   A           AV       +  +    
Sbjct: 91  FLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEA 150

Query: 292 LLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLG 351
           + + L       G  +                    +     +R  K+    +H+AA  G
Sbjct: 151 MEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKG 210

Query: 352 YSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASS 411
           Y+ +++ LI +  D+N K   G T L  +A + +EE  ++L +   D   V+  GQ+A  
Sbjct: 211 YTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFD 270

Query: 412 IAGSN 416
           +A  +
Sbjct: 271 VADED 275

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 68.2 bits (165), Expect = 5e-13
 Identities = 46/286 (16%), Positives = 82/286 (28%), Gaps = 54/286 (18%)

Query: 119 AVREGHLEILEILLKAGASQPACEE----ALLEASCHGQARLAELLMGSDLIRPHVAVHS 174
           A   G  E +  LL+ GA           AL +A       + + L+ +           
Sbjct: 47  ACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEG 106

Query: 175 ---LVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVS 231
              L  A   G++D+ + L+  G  + A +                              
Sbjct: 107 WIPLHAAASCGYLDIAEYLISQGAHVGAVNS----------------------------- 137

Query: 232 VVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRM 291
                 +     D+                  V    A          +  +   S    
Sbjct: 138 ------EGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHIN 191

Query: 292 LLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLG 351
            ++H        G T LH A   G T  + +L+    D         T   P+H AA  G
Sbjct: 192 DVRH-----AKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWT---PLHAAAHWG 243

Query: 352 YSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGA 397
                + L+++ CD+    + G+TA  ++     E+ +  L +   
Sbjct: 244 KEEACRILVENLCDMEAVNKVGQTAFDVAD----EDILGYLEELQK 285

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 48.2 bits (113), Expect = 2e-06
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 5/74 (6%)

Query: 55  TRKTEVVLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF 114
             +T++     K  + +V+F+    D      A  SG+   V +LL  GAD+N     G 
Sbjct: 19  GSETDLEPPVVKRKKTKVKFD----DGAVFLAACSSGDTEEVLRLLERGADINYANVDGL 74

Query: 115 -ATTIAVREGHLEI 127
            A   A  + ++++
Sbjct: 75  TALHQACIDDNVDM 88

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 46.3 bits (108), Expect = 6e-06
 Identities = 27/94 (28%), Positives = 38/94 (40%), Gaps = 5/94 (5%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGA 136
           KS  TAL +AA  G   ++K L+    DVN K + G+     A   G  E   IL++   
Sbjct: 197 KSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLC 256

Query: 137 SQPACEE----ALLEASCHGQARLAELLMGSDLI 166
              A  +    A   A       L EL    +L+
Sbjct: 257 DMEAVNKVGQTAFDVADEDILGYLEELQKKQNLL 290

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 41.6 bits (96), Expect = 2e-04
 Identities = 15/56 (26%), Positives = 22/56 (39%), Gaps = 3/56 (5%)

Query: 77  FKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVRE--GHLEILE 129
                T L  AAH G     + L+    D+      G  A  +A  +  G+LE L+
Sbjct: 229 DYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQ 284

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.4 bits (210), Expect = 2e-19
 Identities = 53/233 (22%), Positives = 91/233 (39%), Gaps = 47/233 (20%)

Query: 445 SPLMF--VAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVE----------- 491
           S LM   +A +G +  LK  I  ++      D +  +A+  A S GH E           
Sbjct: 3   SNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP 62

Query: 492 ----------------------VFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKV 529
                                 + + L+  GA V  +N++G T +  +      ++   +
Sbjct: 63  VNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIA-VM 121

Query: 530 MLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGH 589
           +LE       ++     A+H AA +G+L  + +L       N+ D +G TPL LA  E  
Sbjct: 122 LLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEER 181

Query: 590 GPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLG 642
               +LL+S GA   I+N   +T L +A+             L  + + +V G
Sbjct: 182 VEEAKLLVSQGASIYIENKEEKTPLQVAKGG-----------LGLILKRMVEG 223

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.7 bits (203), Expect = 2e-18
 Identities = 47/255 (18%), Positives = 91/255 (35%), Gaps = 41/255 (16%)

Query: 344 IHLAARLG-YSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
           +   A  G    + +S++          +   TAL  +                      
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSA------------------- 47

Query: 403 SVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKAL 462
                             G    V  +++ G      + A +SPL   A AG    +KAL
Sbjct: 48  ------------------GHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKAL 89

Query: 463 IGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQN 522
           +G+    ++  + NG + +  AASK   E+   L+  GA+    +    TA+  +     
Sbjct: 90  LGKGA-QVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAK-G 147

Query: 523 CDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLM 582
                 ++L +      ++  G   LH A     ++  +LL S+G  + + + +  TPL 
Sbjct: 148 NLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQ 207

Query: 583 LAAREGHGPMCELLI 597
           +A   G G + + ++
Sbjct: 208 VAK-GGLGLILKRMV 221

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.6 bits (169), Expect = 5e-14
 Identities = 36/196 (18%), Positives = 70/196 (35%), Gaps = 9/196 (4%)

Query: 302 HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLID 361
              RT LH A   G T  V                    + P+H+AA  G   IV++L+ 
Sbjct: 35  QDSRTALHWACSAGHTEIVEF---LLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLG 91

Query: 362 SGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVG 421
            G  +N   ++G T L  +A   + E   +L + GA+         +A         + G
Sbjct: 92  KGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHR----AAAKG 147

Query: 422 FQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAV 481
             + +  ++         +    +PL        +   K L+ +   ++  ++    + +
Sbjct: 148 NLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQ-GASIYIENKEEKTPL 206

Query: 482 MVAASKGHVEVFRELV 497
            VA   G   + + +V
Sbjct: 207 QVAK-GGLGLILKRMV 221

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (133), Expect = 3e-09
 Identities = 50/251 (19%), Positives = 80/251 (31%), Gaps = 46/251 (18%)

Query: 119 AVREGHLEILEILLKAGASQPACEE-----ALLEASCHGQARLAELLMGSDLIRPHVAVH 173
               G LE L+  + A  S     +     AL  A   G   + E L+   +        
Sbjct: 10  LAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDA 69

Query: 174 S---LVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQV 230
               L  A   G  ++V  L+  G  +NA +                C+ L  A    + 
Sbjct: 70  GWSPLHIAASAGRDEIVKALLGKGAQVNAVN-------------QNGCTPLHYAASKNRH 116

Query: 231 SVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILR 290
            +  +LL+ GAN D K    A                     A+   A +       IL 
Sbjct: 117 EIAVMLLEGGANPDAKDHYEAT--------------------AMHRAAAKGNLKMIHILL 156

Query: 291 MLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARL 350
                 +      G T LH A          +L+S GA      + +KT   P+ +A   
Sbjct: 157 YYKASTNIQD-TEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKT---PLQVAKG- 211

Query: 351 GYSTIVQSLID 361
           G   I++ +++
Sbjct: 212 GLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (123), Expect = 6e-08
 Identities = 25/151 (16%), Positives = 40/151 (26%), Gaps = 44/151 (29%)

Query: 548 LHCAARRGDLDAVR-LLTSRGYGVNVPDGDGYTPLMLAAREG------------------ 588
           +   A  G L+ ++  + +        D D  T L  A   G                  
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66

Query: 589 ---------------HGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILD 633
                             + + L+  GA  +  N  G T L  A   +            
Sbjct: 67  DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRH---------- 116

Query: 634 EVARMLVLGGGHVLKHTKGGKGTPHRKDIRM 664
           E+A ML+ GG +            HR   + 
Sbjct: 117 EIAVMLLEGGANPDAKDHYEATAMHRAAAKG 147

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (101), Expect = 3e-05
 Identities = 40/230 (17%), Positives = 74/230 (32%), Gaps = 27/230 (11%)

Query: 22  LLEATLAGDLKSATECIADPYVDVNFVG-----AVSLKTRKTEVVLREGKPSEVRVEFEE 76
           +     +G L+   E I                A+          + E          ++
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66

Query: 77  FKSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAG 135
             +  + L +AA +G   +VK LL  GA VN     G      A  +   EI  +LL+ G
Sbjct: 67  DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 126

Query: 136 ASQPACEE----ALLEASCHGQARLAELLMGSDLIRPHVAVH---SLVTACCRGFVDVVD 188
           A+  A +     A+  A+  G  ++  +L+                L  AC    V+   
Sbjct: 127 ANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAK 186

Query: 189 TLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQ 238
            L+  G  I   +               + + L  A       +++ +++
Sbjct: 187 LLVSQGASIYIEN-------------KEEKTPLQVA-KGGLGLILKRMVE 222

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 82.9 bits (203), Expect = 2e-18
 Identities = 42/261 (16%), Positives = 76/261 (29%), Gaps = 38/261 (14%)

Query: 343 PIHLAARLGYSTIVQSLIDS-GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGL 401
           P+H A        VQ L+ S    L  K + G   L  S  ++  E    L     +  L
Sbjct: 3   PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 62

Query: 402 VSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKA 461
                 S  +           +       R                              
Sbjct: 63  DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL------------------------ 98

Query: 462 LIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQ 521
                    +   + G + + +A  K   EV + L+  GA V++ +K  +  +  +    
Sbjct: 99  ---------NKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVG 149

Query: 522 NCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVR-LLTSRGYGVNVPDGDGYTP 580
           +  L E +          ++  G+  L  A   G  DA   L+   G   ++ D  G   
Sbjct: 150 SLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKA 209

Query: 581 LMLAAREGHGPMCELLISNGA 601
             +A  E    + +  ++N  
Sbjct: 210 EDVALNEQ---VKKFFLNNVV 227

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 63.3 bits (152), Expect = 9e-12
 Identities = 44/218 (20%), Positives = 70/218 (32%), Gaps = 39/218 (17%)

Query: 446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKL 505
           PL       +   ++ L+  +   L  +D +G   +  + S    E+   L+    +V L
Sbjct: 3   PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 62

Query: 506 LNKSGKTAIMLSELNQNCDLFEKVM----------------------------------- 530
            +    +      +  +    E V                                    
Sbjct: 63  DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 122

Query: 531 --LEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRG-YGVNVPDGDGYTPLMLAARE 587
             +E       ++      LH AA  G L  + LL   G   VN  D  G+TPL  A  E
Sbjct: 123 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 182

Query: 588 GHGPMCELLISN-GAVCDIKNARGETALSLARKNSSMK 624
           GHG    LL+   GA  D+ + +G  A  +A      K
Sbjct: 183 GHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVKK 220

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 62.1 bits (149), Expect = 2e-11
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 1/59 (1%)

Query: 546 YALHCAARRGDLDAVR-LLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVC 603
           Y LH A    +   V+ LL S+   +   D DG  PL  +       +   L+S     
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV 60

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.7 bits (109), Expect = 3e-06
 Identities = 35/203 (17%), Positives = 57/203 (28%), Gaps = 8/203 (3%)

Query: 302 HYGRTLLHHAILCGCTGAVAVLLSCGAD--AQCPIRTQKTEFHPIHLAARLGYSTIVQSL 359
             GR  LH ++        + LLS   +                I  +            
Sbjct: 32  QDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYD 91

Query: 360 IDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWS 419
                DLN  T  G T L ++   K  E  + L + GA   +     Q     A S    
Sbjct: 92  RPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSL 151

Query: 420 VGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFS 479
              +          +     +   ++PL      G   A   L+ +     D  D+ G  
Sbjct: 152 KLIEL---LCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAK 208

Query: 480 AVMVAASKGHVEVFRELVYAGAD 502
           A  VA ++   +     +    D
Sbjct: 209 AEDVALNEQVKKF---FLNNVVD 228

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.1 bits (97), Expect = 1e-04
 Identities = 28/231 (12%), Positives = 54/231 (23%), Gaps = 57/231 (24%)

Query: 220 ALVAAVVSRQVSVVQLLLQA-GANTDMKVRLG------AWSWDTTTGEEFRVGAGLAEPY 272
            L  A +  +   VQ LL +  +    K + G      + S+       F +        
Sbjct: 3   PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNL 62

Query: 273 AITWCAVEYFEITGSILRMLLQHLSYNSPH------------------------------ 302
                   +     +     L+ +                                    
Sbjct: 63  DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 122

Query: 303 --------------YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAA 348
                         + +  LH A   G    + +L   G          K  + P+  A 
Sbjct: 123 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG--KSAVNWQDKQGWTPLFHAL 180

Query: 349 RLGYSTIVQSLIDS-GCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
             G+      L++  G + +     G  A  ++     E+  K       D
Sbjct: 181 AEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNVVD 228

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.0 bits (94), Expect = 2e-04
 Identities = 27/254 (10%), Positives = 49/254 (19%), Gaps = 31/254 (12%)

Query: 82  TALFLAAHSGNVTLVKKLL-STGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQP 139
             L  A        V++LL S  + + QK   G      +V     EI   LL    +  
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 140 ACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINA 199
             +              +   +                            L         
Sbjct: 62  LDDYPDDSGWTPFHIACSVGNLEVVKSLYD-RPLKPDLNKITNQGVTCLHLAVGKKWFEV 120

Query: 200 TDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTG 259
           +  L+       +    +   L                           L         G
Sbjct: 121 SQFLIENGASVRIKDKFNQIPLH-------------------RAASVGSLKLIELLCGLG 161

Query: 260 EEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHL--SYNSP-HYGRTLLHHAILCGC 316
           +             +     E          +L++     Y+   + G      A+    
Sbjct: 162 KSAVNWQDKQGWTPLFHALAEGHG---DAAVLLVEKYGAEYDLVDNKGAKAEDVAL---N 215

Query: 317 TGAVAVLLSCGADA 330
                  L+   DA
Sbjct: 216 EQVKKFFLNNVVDA 229

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.6 bits (189), Expect = 1e-16
 Identities = 44/223 (19%), Positives = 81/223 (36%), Gaps = 5/223 (2%)

Query: 371 ESGETALMISAKYKQEECVKVL----AKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAV 426
           E G+T L I+        V  L     + G +  + +   Q+   +A         +  V
Sbjct: 1   EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLV 60

Query: 427 LDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAAS 486
                S                       + AL        L+L+ ++ +G +A+ VA +
Sbjct: 61  -TAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVN 119

Query: 487 KGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFY 546
               E  + L+  GAD+  ++     + ++  +  N     +++L+       +   G  
Sbjct: 120 TECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSS 179

Query: 547 ALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGH 589
           ALH A+ RG L  VR L   G   ++ +    TPLM+A     
Sbjct: 180 ALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRV 222

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.8 bits (161), Expect = 5e-13
 Identities = 47/223 (21%), Positives = 94/223 (42%), Gaps = 1/223 (0%)

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQ-KTEFHPIHLAARLGYSTIVQSLIDS 362
           G T LH A++ G   AV  L++        +         P+HLA      ++V+ L+ +
Sbjct: 3   GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 62

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGF 422
           G         G+TA  ++ +++   C++ L  + A   L   +       A     +   
Sbjct: 63  GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTEC 122

Query: 423 QRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVM 482
           Q  V  ++  G    + ++      +  A   +  ++  L+ +   N++ Q  +G SA+ 
Sbjct: 123 QETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALH 182

Query: 483 VAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDL 525
            A+ +G + + R LV +GAD  L N    T +M++   +  D+
Sbjct: 183 SASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDI 225

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.3 bits (152), Expect = 9e-12
 Identities = 39/224 (17%), Positives = 72/224 (32%), Gaps = 11/224 (4%)

Query: 175 LVTACCRGFVDVVDTLMK----CGVDINATDRL----LLQSLKPSLHTNVDCSALVAAVV 226
           L  A  +G +  V  L+      G +++  + L    L  ++  +L + V       A  
Sbjct: 7   LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP 66

Query: 227 SRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITG 286
                  Q              L A       G             A+        + T 
Sbjct: 67  MALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETV 126

Query: 287 SILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHL 346
            +L      +       GR+ L HA+       V +LL  G           +    +H 
Sbjct: 127 QLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHG---ANVNAQMYSGSSALHS 183

Query: 347 AARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVK 390
           A+  G   +V++L+ SG D + K    +T LM++   +  + ++
Sbjct: 184 ASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.8 bits (122), Expect = 7e-08
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 4/54 (7%)

Query: 576 DGYTPLMLAAREGHGPMCELLIS----NGAVCDIKNARGETALSLARKNSSMKN 625
           DG TPL +A  +G+ P    L++     G   DI N   +T L LA   +    
Sbjct: 2   DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSV 55

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.7 bits (114), Expect = 8e-07
 Identities = 15/54 (27%), Positives = 22/54 (40%), Gaps = 4/54 (7%)

Query: 544 GFYALHCAARRGDLDAVRLL----TSRGYGVNVPDGDGYTPLMLAAREGHGPMC 593
           G   LH A  +G+L AV  L       G  +++ +    TPL LA       + 
Sbjct: 3   GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVV 56

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (105), Expect = 1e-05
 Identities = 37/194 (19%), Positives = 78/194 (40%), Gaps = 5/194 (2%)

Query: 302 HYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTI-VQSLI 360
           +  +T LH A++      V +L++ GA      R  +T  H              + S  
Sbjct: 38  NLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAA 97

Query: 361 DSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSV 420
               DL  +   G TAL ++   + +E V++L + GAD   V +    +  I      S+
Sbjct: 98  PGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSL 157

Query: 421 GFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSA 480
              +    +++ G    +   +  S L   +  G +  ++ L+     +   ++ +  + 
Sbjct: 158 SMVQ---LLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSG-ADSSLKNCHNDTP 213

Query: 481 VMVAASKGHVEVFR 494
           +MVA S+  +++ R
Sbjct: 214 LMVARSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (102), Expect = 3e-05
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 84  LFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEIL 128
           L  A+  G + LV+ L+ +GAD + K         +A     ++IL
Sbjct: 181 LHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDIL 226

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (90), Expect = 8e-04
 Identities = 29/205 (14%), Positives = 61/205 (29%), Gaps = 43/205 (20%)

Query: 82  TALFLAAHSGNVTLVKKLLST----GADVNQKLFRG------------------------ 113
           T L +A   GN+  V +L++     G +++                              
Sbjct: 5   TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGA 64

Query: 114 ----------FATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGS 163
                      A  +A        L  LL + A      E     +  G   L   +   
Sbjct: 65  SPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLE---ARNYDGLTALHVAVNTE 121

Query: 164 DLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVD--CSAL 221
                 + +                 L+    + + +   LL     +++  +    SAL
Sbjct: 122 CQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSAL 181

Query: 222 VAAVVSRQVSVVQLLLQAGANTDMK 246
            +A     + +V+ L+++GA++ +K
Sbjct: 182 HSASGRGLLPLVRTLVRSGADSSLK 206

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 73.7 bits (179), Expect = 2e-15
 Identities = 39/243 (16%), Positives = 86/243 (35%), Gaps = 39/243 (16%)

Query: 355 IVQSLIDSGCDLNTKT-ESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIA 413
           ++  L+  G +LN    ++GET+L ++A++ + +  K L                     
Sbjct: 4   VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRL--------------------- 42

Query: 414 GSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQ 473
                               +   +++      ++   +A ++              + +
Sbjct: 43  --LDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNL--------------NAR 86

Query: 474 DDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEF 533
             +G + +++AA      +  +L+ A AD+   + SGKTA+  +    N      ++L  
Sbjct: 87  MHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAA-AVNNTEAVNILLMH 145

Query: 534 ALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMC 593
              +  ++      L  AAR G  +A + L        + D     P  +A+   H  + 
Sbjct: 146 HANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIV 205

Query: 594 ELL 596
            LL
Sbjct: 206 RLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 60.6 bits (145), Expect = 6e-11
 Identities = 34/220 (15%), Positives = 67/220 (30%), Gaps = 28/220 (12%)

Query: 186 VVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDM 245
           V+  L+  G ++NAT                  ++L  A    +    + LL AGA+ + 
Sbjct: 4   VISDLLAQGAELNATM------------DKTGETSLHLAARFARADAAKRLLDAGADANS 51

Query: 246 KVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPH--- 302
           +   G          +      +      T       + T  ++      +         
Sbjct: 52  QDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLIT 111

Query: 303 ----------YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGY 352
                      G+T LH A     T AV +LL   A+        +T         R G 
Sbjct: 112 ADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAA---REGS 168

Query: 353 STIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVL 392
               ++L+D+  +             ++++    + V++L
Sbjct: 169 YEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 53.6 bits (127), Expect = 1e-08
 Identities = 33/181 (18%), Positives = 58/181 (32%), Gaps = 33/181 (18%)

Query: 473 QDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLE 532
            D  G +++ +AA     +  + L+ AGAD    + +G+T +  +       +F+ ++  
Sbjct: 19  MDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRN 78

Query: 533 FALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGP- 591
            A     R   G   L  AAR      V  L +    +N  D  G T L  AA   +   
Sbjct: 79  RATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEA 138

Query: 592 --------------------------------MCELLISNGAVCDIKNARGETALSLARK 619
                                             + L+ N A  +I +        +A +
Sbjct: 139 VNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASE 198

Query: 620 N 620
            
Sbjct: 199 R 199

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 42.5 bits (98), Expect = 6e-05
 Identities = 34/186 (18%), Positives = 59/186 (31%), Gaps = 30/186 (16%)

Query: 95  LVKKLLSTGADVNQKLFRGFATT--IAVREGHLEILEILLKAGASQPACEEALLEASCHG 152
           ++  LL+ GA++N  + +   T+  +A R    +  + LL AGA   + +          
Sbjct: 4   VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAA 63

Query: 153 QAR--------LAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLL 204
            A         L      +   R H     L+ A       +V+ L+    DINA D   
Sbjct: 64  VAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSG 123

Query: 205 LQSLKPSLHTNVDC--------------------SALVAAVVSRQVSVVQLLLQAGANTD 244
             +L  +   N                       + L  A         + LL   AN +
Sbjct: 124 KTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANRE 183

Query: 245 MKVRLG 250
           +   + 
Sbjct: 184 ITDHMD 189

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 39.8 bits (91), Expect = 5e-04
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEIL 131
           T LFLAA  G+    K LL   A+             +A    H +I+ +L
Sbjct: 158 TPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 208

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.8 bits (130), Expect = 2e-09
 Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 3/153 (1%)

Query: 446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKL 505
            L   A  GD+  ++ L+ RE ++ D  +  G +A+ V            L    +    
Sbjct: 5   RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQ 64

Query: 506 LNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTS 565
                      +       L   V     +   +    G   +H A + G    V  L +
Sbjct: 65  DTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGT--GALPIHLAVQEGHTAVVSFLAA 122

Query: 566 RGYGVNVPDGDGYTPLMLAAREGHGPMCELLIS 598
               ++  D  G TPL LA + G   + ++L  
Sbjct: 123 ES-DLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.7 bits (96), Expect = 6e-05
 Identities = 24/156 (15%), Positives = 52/156 (33%), Gaps = 8/156 (5%)

Query: 343 PIHLAARLGYSTIVQSLIDS-GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGL 401
            +  AA  G    V+ L+       +     G+TAL +         +++        G 
Sbjct: 5   RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALEL-----LKQGA 59

Query: 402 VSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKA 461
                 ++ +    +    GF   +  ++  G      +     P+    Q G  A +  
Sbjct: 60  SPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSF 119

Query: 462 LIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELV 497
           L    +L+   +D  G + + +A  +G  ++   L 
Sbjct: 120 LAAESDLHR--RDARGLTPLELALQRGAQDLVDILQ 153

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.9 bits (130), Expect = 2e-09
 Identities = 31/154 (20%), Positives = 52/154 (33%), Gaps = 32/154 (20%)

Query: 479 SAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQ----------------- 521
           + +  AA++G +E    L+    +V   N  G+TA+ + +L                   
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 522 --------------NCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDL-DAVRLLTSR 566
                               + +LEF  +    +  G   LH AA+ G L     L+   
Sbjct: 63  DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122

Query: 567 GYGVNVPDGDGYTPLMLAAREGHGPMCELLISNG 600
              V   +  G T   LA   G   +  L+ +NG
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.0 bits (120), Expect = 4e-08
 Identities = 27/158 (17%), Positives = 54/158 (34%), Gaps = 5/158 (3%)

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLV 402
            +  AA  G    + SL+ +  ++N +   G TAL +      E   ++        G  
Sbjct: 4   ELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRL-----LLRGAN 58

Query: 403 SVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKAL 462
                        +    GF   +  ++         +     PL   A+ G +  ++ L
Sbjct: 59  PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFL 118

Query: 463 IGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAG 500
           +     N+ +++  G +A  +A   G  EV   +   G
Sbjct: 119 VKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (106), Expect = 3e-06
 Identities = 26/178 (14%), Positives = 48/178 (26%), Gaps = 24/178 (13%)

Query: 219 SALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCA 278
           + L +A     +  +  LLQ   N + +   G  +          +   L    A     
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDL- 61

Query: 279 VEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQK 338
                                    G  ++H A   G    +  LL   AD         
Sbjct: 62  ---------------------KDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGN 100

Query: 339 TEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAG 396
              H       L     +     +  ++  +   G+TA  ++  Y + E V ++   G
Sbjct: 101 LPLHLAAKEGHLRVVEFLV--KHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (105), Expect = 4e-06
 Identities = 23/155 (14%), Positives = 46/155 (29%), Gaps = 5/155 (3%)

Query: 175 LVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQ 234
           L +A  RG ++ + +L++  V++NA +              +    +   ++ R  +   
Sbjct: 5   LASAAARGDLEQLTSLLQNNVNVNAQNG---FGRTALQVMKLGNPEIARRLLLRGANPDL 61

Query: 235 LLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQ 294
                 A      R G      T  E             +             +  ++  
Sbjct: 62  KDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKH 121

Query: 295 HLSYNSP--HYGRTLLHHAILCGCTGAVAVLLSCG 327
             S      H G T    A L G    V+++ + G
Sbjct: 122 TASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (100), Expect = 2e-05
 Identities = 26/159 (16%), Positives = 48/159 (30%), Gaps = 5/159 (3%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFATTIAVREGHLEILEILLKAGASQPAC 141
             L  AA  G++  +  LL    +VN +   G      ++ G+ EI   LL  GA+    
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 142 EEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATD 201
           +                     D ++  +   + V          +    K G       
Sbjct: 63  DRTGFAVIHDAARA-----GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEF 117

Query: 202 RLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAG 240
            +   +       +   +A   A +  +  VV L+   G
Sbjct: 118 LVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.8 bits (83), Expect = 0.003
 Identities = 8/32 (25%), Positives = 11/32 (34%)

Query: 579 TPLMLAAREGHGPMCELLISNGAVCDIKNARG 610
             L  AA  G       L+ N    + +N  G
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFG 34

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.1 bits (133), Expect = 2e-09
 Identities = 35/234 (14%), Positives = 65/234 (27%), Gaps = 38/234 (16%)

Query: 373 GETALMISAKYKQ----EECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLD 428
           G++ L ++  +++     E ++ +    A     +   Q+   +A         +  +  
Sbjct: 2   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA 61

Query: 429 IIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKAL-IGREELNLDYQDDNGFSAVMVAASK 487
                      N  +         A      ++         L   + NG + + +A+  
Sbjct: 62  GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIH 121

Query: 488 GHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYA 547
           G++ +   LV  GAD                                         G  A
Sbjct: 122 GYLGIVELLVSLGAD---------------------------------VNAQEPCNGRTA 148

Query: 548 LHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGA 601
           LH A    + D V LL   G  VN     GY+P  L        + + L     
Sbjct: 149 LHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL 202

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (131), Expect = 4e-09
 Identities = 38/203 (18%), Positives = 75/203 (36%), Gaps = 7/203 (3%)

Query: 343 PIHLAARLGYST----IVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
            +HLA           +++ +      LN +    +T L ++    Q E  + L  AG D
Sbjct: 5   FLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD 64

Query: 399 FGLVSVSGQSASSIAGSNW--WSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDI 456
             L    G +   +A       SVG            +I K++N    + L   +  G +
Sbjct: 65  PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYL 124

Query: 457 AALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIML 516
             ++ L+         +  NG +A+ +A    + ++   L+  GADV  +   G +   L
Sbjct: 125 GIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQL 184

Query: 517 SELNQNCDLFEKVMLEFALEKGN 539
           +    +  + +  + +  LE   
Sbjct: 185 TWGRPSTRIQQ-QLGQLTLENLQ 206

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.9 bits (130), Expect = 5e-09
 Identities = 33/208 (15%), Positives = 59/208 (28%), Gaps = 53/208 (25%)

Query: 476 NGFSAVMVAASKGHVEVFRELV----YAGADVKLLNKSGKTAIMLSELNQNCDLFEKVML 531
           +G S + +A       +  E++       A +   N   +T + L+ +    ++ E ++ 
Sbjct: 1   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLG 60

Query: 532 EFALEKGNRNAGGFY--------------------------------------ALHCAAR 553
                +     G                                          LH A+ 
Sbjct: 61  AGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASI 120

Query: 554 RGDLDAVRLLTSRG-YGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGET 612
            G L  V LL S G         +G T L LA    +  +  LL+  GA  +    +G +
Sbjct: 121 HGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS 180

Query: 613 ALSLARKNSSMKNDAELVILDEVARMLV 640
              L     S            + + L 
Sbjct: 181 PYQLTWGRPST----------RIQQQLG 198

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.9 bits (130), Expect = 6e-09
 Identities = 35/203 (17%), Positives = 62/203 (30%), Gaps = 24/203 (11%)

Query: 218 CSALVAAVVSRQVS----VVQLLLQAGANTDMKVRLG------------------AWSWD 255
            S L  A++  + +    V++ +    A  + +  L                        
Sbjct: 3   DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG 62

Query: 256 TTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCG 315
                    G           C      +T S     L  +   + + G T LH A + G
Sbjct: 63  CDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHG 122

Query: 316 CTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGET 375
             G V +L+S GA      +        +HLA  L    +V  L+  G D+N  T  G +
Sbjct: 123 YLGIVELLVSLGA--DVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS 180

Query: 376 ALMISAKYKQEECVKVLAKAGAD 398
              ++         + L +   +
Sbjct: 181 PYQLTWGRPSTRIQQQLGQLTLE 203

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.2 bits (110), Expect = 2e-06
 Identities = 31/203 (15%), Positives = 70/203 (34%), Gaps = 5/203 (2%)

Query: 304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQ-KTEFHPIHLAARLGYSTIVQSLIDS 362
           G + LH AI+         ++         +  Q   +  P+HLA       I ++L+ +
Sbjct: 2   GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA 61

Query: 363 GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSV-- 420
           GCD   +   G T L ++ +      V VL ++     L S+   +  +       +   
Sbjct: 62  GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIH 121

Query: 421 GFQRAVLDIIRSGNIPKSSNVAV-FSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFS 479
           G+   V  ++  G    +       + L       +   +  L+     +++     G+S
Sbjct: 122 GYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGA-DVNRVTYQGYS 180

Query: 480 AVMVAASKGHVEVFRELVYAGAD 502
              +   +    + ++L     +
Sbjct: 181 PYQLTWGRPSTRIQQQLGQLTLE 203

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.7 bits (106), Expect = 7e-06
 Identities = 33/212 (15%), Positives = 59/212 (27%), Gaps = 12/212 (5%)

Query: 169 HVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPS-LHTNVDCSALVAAVVS 227
           H+A+     A      +V+  +      +N  + L    L  + +    + +  +     
Sbjct: 7   HLAIIHEEKALTM---EVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGC 63

Query: 228 RQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGS 287
                             +  L +    T +     + + L          +    I G 
Sbjct: 64  DPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGY 123

Query: 288 ILRMLLQHLS-----YNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFH 342
           +  + L            P  GRT LH A+       V++LL CGAD         +   
Sbjct: 124 LGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYS--- 180

Query: 343 PIHLAARLGYSTIVQSLIDSGCDLNTKTESGE 374
           P  L      + I Q L     +        E
Sbjct: 181 PYQLTWGRPSTRIQQQLGQLTLENLQMLPESE 212

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (95), Expect = 2e-04
 Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQ 138
           TAL LA    N  LV  LL  GADVN+  ++G+    +        I + L +     
Sbjct: 147 TALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN 204

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 53.8 bits (128), Expect = 4e-09
 Identities = 26/140 (18%), Positives = 44/140 (31%), Gaps = 9/140 (6%)

Query: 438 SSNVAVFSPLMFVAQAGDIAALKALIGR-----EELNLDYQDDNGFSAVMVAA---SKGH 489
           +   A    L    +  DI  L           E++ L    +   +A+ +A     +  
Sbjct: 1   ADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTS 60

Query: 490 VEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALH 549
           + +   LV    ++      G TA+    L  N +  + ++   A      N  G   L 
Sbjct: 61  LHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKA-SIEIANESGETPLD 119

Query: 550 CAARRGDLDAVRLLTSRGYG 569
            A R        LLT    G
Sbjct: 120 IAKRLKHEHCEELLTQALSG 139

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 51.1 bits (121), Expect = 4e-08
 Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 6/106 (5%)

Query: 296 LSYNSPHYGRTLLHHAILCGCTGAVAV---LLSCGADAQCPIRTQKTEFHPIHLAARLGY 352
              N      T LH A+      ++ +   L+    +         T  H          
Sbjct: 37  PLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCC---LTDN 93

Query: 353 STIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGAD 398
           +  ++ L+     +    ESGET L I+ + K E C ++L +A + 
Sbjct: 94  AECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSG 139

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.6 bits (104), Expect = 6e-06
 Identities = 20/176 (11%), Positives = 42/176 (23%), Gaps = 47/176 (26%)

Query: 338 KTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKT------ESGETALMISAKYKQE---EC 388
             + H +  A +      +      G DL  K       E  ETAL ++ +         
Sbjct: 4   AAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHI 63

Query: 389 VKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLM 448
           V  L +   +    +  G +A         +   +  +                      
Sbjct: 64  VDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASI---------------- 107

Query: 449 FVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVK 504
                                 +  +++G + + +A    H      L  A +   
Sbjct: 108 ----------------------EIANESGETPLDIAKRLKHEHCEELLTQALSGRF 141

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.2 bits (103), Expect = 8e-06
 Identities = 12/70 (17%), Positives = 22/70 (31%), Gaps = 9/70 (12%)

Query: 541 NAGGFYALHCAARRGDLDAVRLLTSRGYGVNVP------DGDGYTPLMLAAR---EGHGP 591
            A   ++L  A +  D+  +    + G  +              T L LA R        
Sbjct: 3   TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLH 62

Query: 592 MCELLISNGA 601
           + + L+ N  
Sbjct: 63  IVDFLVQNSG 72

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.3 bits (98), Expect = 4e-05
 Identities = 19/175 (10%), Positives = 48/175 (27%), Gaps = 49/175 (28%)

Query: 78  KSDVTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGFA----------TTIAVREGHLEI 127
            + + +L  A  + ++  + +  + G D+ +K+                  +V    L I
Sbjct: 4   AAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHI 63

Query: 128 LEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTACCRGFVDVV 187
           ++ L++   +                             +      +L   C     + +
Sbjct: 64  VDFLVQNSGNLD--------------------------KQTGKGSTALHYCCLTDNAECL 97

Query: 188 DTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGAN 242
             L++    I   +                 + L  A   +     +LL QA + 
Sbjct: 98  KLLLRGKASIEIAN-------------ESGETPLDIAKRLKHEHCEELLTQALSG 139

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.3 bits (93), Expect = 2e-04
 Identities = 24/162 (14%), Positives = 42/162 (25%), Gaps = 31/162 (19%)

Query: 171 AVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSAL---VAAVVS 227
            +HSL  A     +  +      GVD+          +  +     D +AL   V +V  
Sbjct: 6   KLHSLCEAVKTRDIFGLLQAYADGVDLTEK-------IPLANGHEPDETALHLAVRSVDR 58

Query: 228 RQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGS 287
             + +V  L+Q   N D +   G+ +       +      L      +            
Sbjct: 59  TSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIAN------- 111

Query: 288 ILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGAD 329
                           G T L  A          +L    + 
Sbjct: 112 --------------ESGETPLDIAKRLKHEHCEELLTQALSG 139

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.5 bits (83), Expect = 0.004
 Identities = 22/156 (14%), Positives = 41/156 (26%), Gaps = 15/156 (9%)

Query: 220 ALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAV 279
           +L  AV +R +  +      G +   K+ L        T     V +       I    V
Sbjct: 9   SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHI----V 64

Query: 280 EYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKT 339
           ++       L       S    +   T     +               A  +    + +T
Sbjct: 65  DFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR--------GKASIEIANESGET 116

Query: 340 EFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGET 375
              P+ +A RL +    + L  +           E 
Sbjct: 117 ---PLDIAKRLKHEHCEELLTQALSGRFNSHVHVEY 149

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.9 bits (125), Expect = 1e-08
 Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 3/151 (1%)

Query: 446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKL 505
            L+  A+AG    ++ L+          D  G S + +AA  GH      L+ AG     
Sbjct: 5   KLLEAARAGQDDEVRILMANGAPF--TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA 62

Query: 506 LNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTS 565
             K  +T + ++    + ++ E ++   A +   ++     ALH A      + V LL  
Sbjct: 63  RTKVDRTPLHMAASEGHANIVEVLLKHGA-DVNAKDMLKMTALHWATEHNHQEVVELLIK 121

Query: 566 RGYGVNVPDGDGYTPLMLAAREGHGPMCELL 596
            G  V+       T   ++   G+  + E+L
Sbjct: 122 YGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.9 bits (117), Expect = 1e-07
 Identities = 37/173 (21%), Positives = 62/173 (35%), Gaps = 25/173 (14%)

Query: 220 ALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAV 279
            L+ A  + Q   V++L+  GA              T+                    A 
Sbjct: 5   KLLEAARAGQDDEVRILMANGAPFT------TDWLGTS----------------PLHLAA 42

Query: 280 EYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKT 339
           +Y   + + + +             RT LH A   G    V VLL  GAD       +  
Sbjct: 43  QYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLK-- 100

Query: 340 EFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVL 392
               +H A    +  +V+ LI  G D++T+++  +TA  IS     E+  ++L
Sbjct: 101 -MTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.6 bits (93), Expect = 2e-04
 Identities = 25/162 (15%), Positives = 49/162 (30%), Gaps = 20/162 (12%)

Query: 82  TALFLAAHSGNVTLVKKLLSTGADVNQ------KLFRGFATTIAVREGHLEILEILLKAG 135
             L  AA +G    V+ L++ GA           L              L    +   A 
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63

Query: 136 ASQPACEEALLEASCHGQARLAELLMGSDLIRPHVA-VHSLVTACCRGFVDVVDTLMKCG 194
                    +  +  H       L  G+D+    +  + +L  A      +VV+ L+K G
Sbjct: 64  TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123

Query: 195 VDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLL 236
            D++                    +A   ++ +    + ++L
Sbjct: 124 ADVHTQS-------------KFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.7 bits (88), Expect = 7e-04
 Identities = 33/153 (21%), Positives = 58/153 (37%), Gaps = 6/153 (3%)

Query: 375 TALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGN 434
             L+ +A+  Q++ V++L   GA     +      S +  +  +       VL       
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAP---FTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR 60

Query: 435 IPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFR 494
             ++        +       +I  +    G    +++ +D    +A+  A    H EV  
Sbjct: 61  DARTKVDRTPLHMAASEGHANIVEVLLKHGA---DVNAKDMLKMTALHWATEHNHQEVVE 117

Query: 495 ELVYAGADVKLLNKSGKTAIMLSELNQNCDLFE 527
            L+  GADV   +K  KTA  +S  N N DL E
Sbjct: 118 LLIKYGADVHTQSKFCKTAFDISIDNGNEDLAE 150

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.7 bits (88), Expect = 8e-04
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 576 DGYTPLMLAAREGHGPMCELLISNGAVCDIKN 607
           D    L+ AAR G      +L++NGA      
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFTTDW 32

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.5 bits (114), Expect = 2e-07
 Identities = 17/126 (13%), Positives = 41/126 (32%), Gaps = 4/126 (3%)

Query: 479 SAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG 538
           + ++ ++ +G  ++ + ++Y   D  L N  G TA+  +    + ++ + ++        
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 539 NRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVP---DGDGYTPLMLAAREGHGPMCEL 595
             + G       A+         L+   G  V      D            EG+    + 
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLV-ESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 121

Query: 596 LISNGA 601
           L     
Sbjct: 122 LYGVQE 127

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (87), Expect = 6e-04
 Identities = 13/131 (9%), Positives = 30/131 (22%), Gaps = 17/131 (12%)

Query: 119 AVREGHLEILEILLKAGAS-------QPACEEALLEASCHGQARLAELLMGSDLIRPHVA 171
           +  EG  ++++ ++                    + A      +       +        
Sbjct: 8   SSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDG 67

Query: 172 VHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVS 231
              L  A     V V   L++ G  + A     +Q+           +     +      
Sbjct: 68  WTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQT----------AADKCEEMEEGYTQ 117

Query: 232 VVQLLLQAGAN 242
             Q L      
Sbjct: 118 CSQFLYGVQEK 128

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (86), Expect = 9e-04
 Identities = 20/128 (15%), Positives = 34/128 (26%), Gaps = 33/128 (25%)

Query: 306 TLLHHAILCGCTGAVAVLLSCGAD------------------------------AQCPIR 335
            LL  + L G    V  ++    D                                    
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 336 TQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTES-GETA--LMISAKYKQEECVKVL 392
                + P+H AA      + + L++SG  +   T S  +TA       +    +C + L
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122

Query: 393 AKAGADFG 400
                  G
Sbjct: 123 YGVQEKMG 130

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 0.001
 Identities = 19/148 (12%), Positives = 36/148 (24%), Gaps = 21/148 (14%)

Query: 219 SALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCA 278
           + L+ + +  +  +VQ ++    +  +    G  +                        A
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITAL---------------------HNA 41

Query: 279 VEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQK 338
           V           +        +   G T LH A  C        L+  GA       +  
Sbjct: 42  VCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDM 101

Query: 339 TEFHPIHLAARLGYSTIVQSLIDSGCDL 366
                       GY+   Q L      +
Sbjct: 102 QTAADKCEEMEEGYTQCSQFLYGVQEKM 129

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (104), Expect = 3e-06
 Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 1/124 (0%)

Query: 475 DNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFA 534
           +     +  AA++G VE  R L+ AGA+    N  G+  I +  +         ++    
Sbjct: 1   EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAE 60

Query: 535 LEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCE 594
               +         H AAR G LD + +L   G  ++V D  G  P+ LA   GH  +  
Sbjct: 61  PNCADPATLTRPV-HDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVAR 119

Query: 595 LLIS 598
            L +
Sbjct: 120 YLRA 123

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	748
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	100.0
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	100.0
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	100.0
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	100.0
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	100.0
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	100.0
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	100.0
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	100.0
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	100.0
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	100.0
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	100.0
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	100.0
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	100.0
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.98
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.97
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.96
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.96
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.96
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.96
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.96
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.96
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.94
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.92
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.91
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.91
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.91
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.9
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.9
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.89
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.88
d1maia_	119	Phospholipase C delta-1 {Rat (Rattus norvegicus) [	83.08

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=384.70  Aligned_cols=398  Identities=27%  Similarity=0.363  Sum_probs=296.4

Q ss_pred             CHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCH-HHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHH
Q ss_conf             1499999960999999999976999875655672-678999809499999999769998531129999994086999999
Q 004504           81 VTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAEL  159 (748)
Q Consensus        81 ~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~~~~g~-~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~l~~A~~~g~~~~v~~  159 (748)
                      .||||.||..|+.++|++|+++|+++|..+..|. |||+|+..|+.+++++|+++|++++.                   
T Consensus         1 ~TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~-------------------   61 (408)
T d1n11a_           1 LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA-------------------   61 (408)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSC-------------------
T ss_pred             CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC-------------------
T ss_conf             9869999988489999999978789998899998899999986889999999988599887-------------------


Q ss_pred             HHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC
Q ss_conf             83089888776651789976119987999999879997621035642028765578899878999983999999999986
Q 004504          160 LMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQA  239 (748)
Q Consensus       160 L~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~d~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~  239 (748)
                             .+..+.+||++|+..|+.+++++|+..+.+.....             ....+++..+...+...........
T Consensus        62 -------~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~  121 (408)
T d1n11a_          62 -------KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLAT-------------TAGHTPLHIAAREGHVETVLALLEK  121 (408)
T ss_dssp             -------CCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCC-------------TTCCCHHHHHHHHTCHHHHHHHHHT
T ss_pred             -------CCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCC-------------CCCCCHHHHHHHHCCCCCCCCCCCC
T ss_conf             -------79998999999998699779999987410012321-------------1122024555430332222222211


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHH
Q ss_conf             99987211258764567774013540356775311013579745019899999603389999987419999998499999
Q 004504          240 GANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGA  319 (748)
Q Consensus       240 ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~L~~A~~~g~~~~  319 (748)
                      +......                                                      +..+.++++.|+..++.++
T Consensus       122 ~~~~~~~------------------------------------------------------~~~~~~~l~~a~~~~~~~~  147 (408)
T d1n11a_         122 EASQACM------------------------------------------------------TKKGFTPLHVAAKYGKVRV  147 (408)
T ss_dssp             TCCSCCC------------------------------------------------------CTTSCCHHHHHHHTTCHHH
T ss_pred             CCCCCCC------------------------------------------------------CCCCCHHHHHHHHCCCHHH
T ss_conf             0010014------------------------------------------------------5646428999987598999


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC
Q ss_conf             99999689998898668889881899999749999999999769998888999973889999759988999999849998
Q 004504          320 VAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADF  399 (748)
Q Consensus       320 v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~  399 (748)
                      +++|++.|++++.   .+..+.+||+.|+..|+.+++++|+++|++++..+..|.||++.+....+.+....++..+...
T Consensus       148 v~~ll~~~~~~~~---~~~~~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~  224 (408)
T d1n11a_         148 AELLLERDAHPNA---AGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSA  224 (408)
T ss_dssp             HHHHHHTTCCTTC---CCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred             HHHHHHCCCCCCC---CCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCC
T ss_conf             9999976998886---7876740999999859999999998658840045778997102432021045555543200122


Q ss_pred             CCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCH
Q ss_conf             75335899832331105654046999999998399999998778718999997099999999984489886446999971
Q 004504          400 GLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFS  479 (748)
Q Consensus       400 ~~~~~~~~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t  479 (748)
                      ...+.                                     .+.+|++.|+..++.+++++++... ...+..+..|.+
T Consensus       225 ~~~~~-------------------------------------~~~t~l~~a~~~~~~~~~~~~~~~~-~~~~~~~~~g~~  266 (408)
T d1n11a_         225 NAESV-------------------------------------QGVTPLHLAAQEGHAEMVALLLSKQ-ANGNLGNKSGLT  266 (408)
T ss_dssp             TCCCT-------------------------------------TCCCHHHHHHHTTCHHHHHHHHTTT-CCTTCCCTTCCC
T ss_pred             CCCCC-------------------------------------CCCCHHHHHHHHCCHHHHHHHHCCC-CCCCCCCCCCCC
T ss_conf             12477-------------------------------------8999999999808676754420022-111112478997


Q ss_pred             HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHH
Q ss_conf             99999981979999999987999766777898387799971790699999999755208988998539999996499999
Q 004504          480 AVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDA  559 (748)
Q Consensus       480 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~  559 (748)
                      |++.++..++.+++++|+++|++++..+..                                  +.||||.++..++.++
T Consensus       267 ~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~----------------------------------~~t~L~~~~~~~~~~~  312 (408)
T d1n11a_         267 PLHLVAQEGHVPVADVLIKHGVMVDATTRM----------------------------------GYTPLHVASHYGNIKL  312 (408)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHTCCTTCCCSS----------------------------------CCCHHHHHHHSSCSHH
T ss_pred             HHHHHHHCCCHHHHHHHHHCCCCCCCCCCC----------------------------------CCCCCHHHCCCCCCEE
T ss_conf             334543028489999999779965621023----------------------------------4453022100586213


Q ss_pred             HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf             99999699999999999994989999819989999999599998999899985899998669997414787799999999
Q 004504          560 VRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARML  639 (748)
Q Consensus       560 v~~Ll~~g~~~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~L  639 (748)
                      ++++++.|+++|.+|..|.||||+|++.|+.++|++|+++|||+|++|+.|+||||+|+..+.. +..      ++.+.+
T Consensus       313 ~~~ll~~g~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~d~~G~t~L~~A~~~~~~-~iv------~~L~~~  385 (408)
T d1n11a_         313 VKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYI-SVT------DVLKVV  385 (408)
T ss_dssp             HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCH-HHH------HHHHHH
T ss_pred             EEEECCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH-HHH------HHHHHH
T ss_conf             5530133332234689999999999986889999999987889988799998999999983999-999------999998


Q ss_pred             HHCCCCCCCCCCCC
Q ss_conf             93999865446899
Q 004504          640 VLGGGHVLKHTKGG  653 (748)
Q Consensus       640 ~~~ga~~~~~~~~g  653 (748)
                      +.++++....++..
T Consensus       386 ~~~~~~~~~~~~~~  399 (408)
T d1n11a_         386 TDETSFVLVSDKHR  399 (408)
T ss_dssp             CCCCSSCC----CC
T ss_pred             HHCCCCCCCCCCCC
T ss_conf             73656456000366

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=0  Score=383.69  Aligned_cols=392  Identities=27%  Similarity=0.349  Sum_probs=306.7

Q ss_pred             HHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHCCCHHHHHHH
Q ss_conf             99999995099999997640899874313100000012123330489964201121015871499999960999999999
Q 004504           20 QRLLEATLAGDLKSATECIADPYVDVNFVGAVSLKTRKTEVVLREGKPSEVRVEFEEFKSDVTALFLAAHSGNVTLVKKL   99 (748)
Q Consensus        20 ~~l~~A~~~G~~~~v~~ll~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~L   99 (748)
                      ++|+.|+..|++++|+++++.| .++|..+                            ..|.||||+||..|+.++|++|
T Consensus         2 TpL~~Aa~~g~~~~v~~Ll~~g-~~in~~d----------------------------~~g~TpL~~A~~~g~~~iv~~L   52 (408)
T d1n11a_           2 TPLHVASFMGHLPIVKNLLQRG-ASPNVSN----------------------------VKVETPLHMAARAGHTEVAKYL   52 (408)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTT-CCSCCSS----------------------------SCCCCHHHHHHHHTCHHHHHHH
T ss_pred             CHHHHHHHCCCHHHHHHHHHCC-CCCCCCC----------------------------CCCCCHHHHHHHCCCHHHHHHH
T ss_conf             8699999884899999999787-8999889----------------------------9998899999986889999999


Q ss_pred             HHCCCCCCCCCCCCH-HHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCHHHHH
Q ss_conf             976999875655672-6789998094999999997699985311299999940869999998308988877665178997
Q 004504          100 LSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAELLMGSDLIRPHVAVHSLVTA  178 (748)
Q Consensus       100 l~~ga~~n~~~~~g~-~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~l~~A~~~g~~~~v~~L~~~~~~~~~~~~~~L~~A  178 (748)
                      +++|++++..+..|. |+++|+..|+.+++++|+..+.+...                          .......++..+
T Consensus        53 l~~gadi~~~~~~g~t~L~~A~~~g~~~~~~~Ll~~~~~~~~--------------------------~~~~~~~~~~~~  106 (408)
T d1n11a_          53 LQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNL--------------------------ATTAGHTPLHIA  106 (408)
T ss_dssp             HHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTC--------------------------CCTTCCCHHHHH
T ss_pred             HHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCC--------------------------CCCCCCCHHHHH
T ss_conf             988599887799989999999986997799999874100123--------------------------211122024555


Q ss_pred             HHCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf             61199879999998799976210356420287655788998789999839999999999869998721125876456777
Q 004504          179 CCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTT  258 (748)
Q Consensus       179 ~~~g~~~~v~~Ll~~g~d~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~  258 (748)
                      ...+...........+...+..+.             .+.++++.|+..++.+++++|+++|++++..            
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~------------  161 (408)
T d1n11a_         107 AREGHVETVLALLEKEASQACMTK-------------KGFTPLHVAAKYGKVRVAELLLERDAHPNAA------------  161 (408)
T ss_dssp             HHHTCHHHHHHHHHTTCCSCCCCT-------------TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC------------
T ss_pred             HHHCCCCCCCCCCCCCCCCCCCCC-------------CCCHHHHHHHHCCCHHHHHHHHHCCCCCCCC------------
T ss_conf             430332222222211001001456-------------4642899998759899999999769988867------------


Q ss_pred             CCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             40135403567753110135797450198999996033899999874199999984999999999968999889866888
Q 004504          259 GEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQK  338 (748)
Q Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~  338 (748)
                                                                +..+.++|+.|+..|+.+++++|+.+|++++.   .+.
T Consensus       162 ------------------------------------------~~~~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~---~~~  196 (408)
T d1n11a_         162 ------------------------------------------GKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHS---PAW  196 (408)
T ss_dssp             ------------------------------------------CSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCC---CCT
T ss_pred             ------------------------------------------CCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCC---CCC
T ss_conf             ------------------------------------------87674099999985999999999865884004---577


Q ss_pred             CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf             98818999997499999999997699988889999738899997599889999998499987533589983233110565
Q 004504          339 TEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWW  418 (748)
Q Consensus       339 ~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~  418 (748)
                      .+.+|+|.+......++...++..+......+..+.|||+.|+..++.++++++...+...+..+..+            
T Consensus       197 ~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~g------------  264 (408)
T d1n11a_         197 NGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSG------------  264 (408)
T ss_dssp             TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTC------------
T ss_pred             CCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCC------------
T ss_conf             89971024320210455555432001221247789999999998086767544200221111124789------------


Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH
Q ss_conf             40469999999983999999987787189999970999999999844898864469999719999998197999999998
Q 004504          419 SVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVY  498 (748)
Q Consensus       419 ~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~  498 (748)
                                               .+|++.++..++.+++++|++.+ ++++..+..+.|||+.++..++.++++++++
T Consensus       265 -------------------------~~~l~~a~~~~~~~i~~~Ll~~g-~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~  318 (408)
T d1n11a_         265 -------------------------LTPLHLVAQEGHVPVADVLIKHG-VMVDATTRMGYTPLHVASHYGNIKLVKFLLQ  318 (408)
T ss_dssp             -------------------------CCHHHHHHHHTCHHHHHHHHHHT-CCTTCCCSSCCCHHHHHHHSSCSHHHHHHHH
T ss_pred             -------------------------CCHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCCCHHHCCCCCCEEEEEECC
T ss_conf             -------------------------97334543028489999999779-9656210234453022100586213553013


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             79997667778983877999717906999999997552089889985399999964999999999969999999999999
Q 004504          499 AGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGY  578 (748)
Q Consensus       499 ~ga~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~  578 (748)
                      .|++++.++..|                                  .||||.|++.|+.+++++|+++|+|+|.+|.+|.
T Consensus       319 ~g~~in~~d~~G----------------------------------~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~~d~~G~  364 (408)
T d1n11a_         319 HQADVNAKTKLG----------------------------------YSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGT  364 (408)
T ss_dssp             TTCCTTCCCTTS----------------------------------CCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSC
T ss_pred             CCCCCCCCCCCC----------------------------------CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             333223468999----------------------------------9999999986889999999987889988799998


Q ss_pred             CHHHHHHHCCCHHHHHHHHH---CCCCCCCCCC
Q ss_conf             49899998199899999995---9999899989
Q 004504          579 TPLMLAAREGHGPMCELLIS---NGAVCDIKNA  608 (748)
Q Consensus       579 tpL~~A~~~~~~~~v~~Ll~---~ga~~~~~d~  608 (748)
                      ||||+|++.|+.++|++|..   .+++..+.+.
T Consensus       365 t~L~~A~~~~~~~iv~~L~~~~~~~~~~~~~~~  397 (408)
T d1n11a_         365 TPLAIAKRLGYISVTDVLKVVTDETSFVLVSDK  397 (408)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHHCCCCSSCC----
T ss_pred             CHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             999999983999999999998736564560003

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-43  Score=258.83  Aligned_cols=275  Identities=29%  Similarity=0.347  Sum_probs=167.9

Q ss_pred             CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf             99878999983999999999986999872112587645677740135403567753110135797450198999996033
Q 004504          217 DCSALVAAVVSRQVSVVQLLLQAGANTDMKVRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHL  296 (748)
Q Consensus       217 ~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~  296 (748)
                      +.|+|+.|+.+|+.++|++|+++|++++..                                                  
T Consensus         5 ~~~~L~~Ai~~~~~e~vk~Ll~~G~din~~--------------------------------------------------   34 (285)
T d1wdya_           5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQ--------------------------------------------------   34 (285)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHTTCCTTCC--------------------------------------------------
T ss_pred             CCHHHHHHHHCCCHHHHHHHHHCCCCCCCC--------------------------------------------------
T ss_conf             848999999829999999999879896824--------------------------------------------------


Q ss_pred             CCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCH
Q ss_conf             89999987419999998499999999996899988986688898818999997499999999997699988889999738
Q 004504          297 SYNSPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETA  376 (748)
Q Consensus       297 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~  376 (748)
                         .+..|.||||+|+..|+.+++++|++.+.....   ......+|.+.+...+..+...++++...+....+..+.++
T Consensus        35 ---~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (285)
T d1wdya_          35 ---EEEGGWTPLHNAVQMSREDIVELLLRHGADPVL---RKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTA  108 (285)
T ss_dssp             ---CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC---CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBH
T ss_pred             ---CCCCCCCHHHHHHHCCCHHHHHHHCCCCCCCCC---CCCCCCHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCH
T ss_conf             ---899997999999985999886552023432222---22111114677764387532211343102210135689863


Q ss_pred             HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH
Q ss_conf             89999759988999999849998753358998323311056540469999999983999999987787189999970999
Q 004504          377 LMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDI  456 (748)
Q Consensus       377 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~  456 (748)
                      ++.++..++...++.++....+++.........                           ......|.||||+|++.++.
T Consensus       109 l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~g~t~L~~A~~~~~~  161 (285)
T d1wdya_         109 FMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQ---------------------------ERLRKGGATALMDAAEKGHV  161 (285)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHH---------------------------HHTTCCCCCHHHHHHHHTCH
T ss_pred             HHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHH---------------------------HHHCCCCCHHHHHHHHCCCH
T ss_conf             678887400125445443100113232101222---------------------------22014685699999986899


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHC----CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHH
Q ss_conf             9999998448988644699997199999981----979999999987999766777898387799971790699999999
Q 004504          457 AALKALIGREELNLDYQDDNGFSAVMVAASK----GHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLE  532 (748)
Q Consensus       457 ~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~----g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~  532 (748)
                      +++++|+++.+++++..+..+.+++..+...    +..+++++|+++|++++.++.                        
T Consensus       162 ~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~------------------------  217 (285)
T d1wdya_         162 EVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGE------------------------  217 (285)
T ss_dssp             HHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCT------------------------
T ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC------------------------
T ss_conf             99999984569894554678983322332234301799999999977999886689------------------------


Q ss_pred             HHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf             755208988998539999996499999999996-9999999999999498999981998999999959999899989
Q 004504          533 FALEKGNRNAGGFYALHCAARRGDLDAVRLLTS-RGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNA  608 (748)
Q Consensus       533 ~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~-~g~~~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~  608 (748)
                                .|.||||.|+..++.+++++|++ .|+++|.+|.+|.||||+|++.|+.+++++||++|||+|++|.
T Consensus       218 ----------~g~t~L~~a~~~~~~~~v~~lL~~~g~din~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d~  284 (285)
T d1wdya_         218 ----------RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL  284 (285)
T ss_dssp             ----------TSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred             ----------CCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCC
T ss_conf             ----------9998241122138699999999808999868799998999999985979999999987989986017

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-43  Score=256.13  Aligned_cols=269  Identities=28%  Similarity=0.354  Sum_probs=213.4

Q ss_pred             CCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             87419999998499999999996899988986688898818999997499999999997699988889999738899997
Q 004504          303 YGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAK  382 (748)
Q Consensus       303 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~  382 (748)
                      ++.|+|+.|++.|+.++|++|+++|++++..  .+..|.||||+|+..|+.+++++|++.+......+..+.+|.+.+..
T Consensus         4 ~~~~~L~~Ai~~~~~e~vk~Ll~~G~din~~--~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~   81 (285)
T d1wdya_           4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQ--EEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAI   81 (285)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCC--CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred             CCCHHHHHHHHCCCHHHHHHHHHCCCCCCCC--CCCCCCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf             8848999999829999999999879896824--89999799999998599988655202343222222111114677764


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Q ss_conf             59988999999849998753358998323311056540469999999983999999987787189999970999999999
Q 004504          383 YKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKAL  462 (748)
Q Consensus       383 ~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~L  462 (748)
                      .+..+...++++...+....+..                                     +.++++.++..++...+..+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------~~~~l~~a~~~~~~~~~~~~  124 (285)
T d1wdya_          82 AGSVKLLKLFLSKGADVNECDFY-------------------------------------GFTAFMEAAVYGKVKALKFL  124 (285)
T ss_dssp             HTCHHHHHHHHHTTCCTTCBCTT-------------------------------------CCBHHHHHHHTTCHHHHHHH
T ss_pred             CCCCCCCCHHHHHCCCCCCCCCC-------------------------------------CCCHHHHHHHHCCHHHHHHH
T ss_conf             38753221134310221013568-------------------------------------98636788874001254454


Q ss_pred             HHCCCCCCC----------CCCCCCCHHHHHHHHCCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
Q ss_conf             844898864----------469999719999998197999999998-799976677789838779997179069999999
Q 004504          463 IGREELNLD----------YQDDNGFSAVMVAASKGHVEVFRELVY-AGADVKLLNKSGKTAIMLSELNQNCDLFEKVML  531 (748)
Q Consensus       463 l~~~~~~~~----------~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~  531 (748)
                      +... .+++          .....|.||||+|+..++.+++++|++ .|++++..+..|.++...+...           
T Consensus       125 ~~~~-~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~-----------  192 (285)
T d1wdya_         125 YKRG-ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLS-----------  192 (285)
T ss_dssp             HHTT-CCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHC-----------
T ss_pred             HHHC-CCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC-----------
T ss_conf             4310-0113232101222220146856999999868999999998456989455467898332233223-----------


Q ss_pred             HHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH-CCCCCCCCCCCC
Q ss_conf             9755208988998539999996499999999996999999999999949899998199899999995-999989998999
Q 004504          532 EFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLIS-NGAVCDIKNARG  610 (748)
Q Consensus       532 ~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g  610 (748)
                                         +...+..+++++|+++|++++.+|..|.||||.|+..|+.+++++|++ .|++++.+|..|
T Consensus       193 -------------------~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a~~~~~~~~v~~lL~~~g~din~~d~~G  253 (285)
T d1wdya_         193 -------------------SDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDG  253 (285)
T ss_dssp             -------------------SCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTS
T ss_pred             -------------------CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
T ss_conf             -------------------4301799999999977999886689999824112213869999999980899986879999


Q ss_pred             CCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             85899998669997414787799999999939998654468
Q 004504          611 ETALSLARKNSSMKNDAELVILDEVARMLVLGGGHVLKHTK  651 (748)
Q Consensus       611 ~t~L~~a~~~~~~~~~~~~~~~~~~~~~L~~~ga~~~~~~~  651 (748)
                      .||||+|+.+++.          +++++|+++||+++.+|.
T Consensus       254 ~TpL~~A~~~~~~----------eiv~~Ll~~GAd~n~~d~  284 (285)
T d1wdya_         254 KTALLLAVELKLK----------KIAELLCKRGASTDCGDL  284 (285)
T ss_dssp             CCHHHHHHHTTCH----------HHHHHHHHHSSCSCCSSC
T ss_pred             CCHHHHHHHCCCH----------HHHHHHHHCCCCCCCCCC
T ss_conf             8999999985979----------999999987989986017

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.3e-44  Score=260.38  Aligned_cols=246  Identities=22%  Similarity=0.226  Sum_probs=155.2

Q ss_pred             CCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf             99987419999998499999999996899988986688898818999997499999999997699988889999738899
Q 004504          300 SPHYGRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMI  379 (748)
Q Consensus       300 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~  379 (748)
                      .+.+|.||||+|+..|+.+++++|+++|+++......+..|.||||+|+..|+.+++++|+++|++++..+..|.|||++
T Consensus         5 i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g~tpL~~   84 (255)
T d1oy3d_           5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHL   84 (255)
T ss_dssp             CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHH
T ss_pred             CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf             89599789999998588999999998699900115758999972406876245432322223333322322222102333


Q ss_pred             HHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHH
Q ss_conf             99759988999999849998753358998323311056540469999999983999999987787189999970999999
Q 004504          380 SAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAAL  459 (748)
Q Consensus       380 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v  459 (748)
                      |+..++.+++++|++.+...........   ......                 ..+    ......+............
T Consensus        85 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~---~~~~~~-----------------~~~----~~~~~~~~~~~~~~~~~~~  140 (255)
T d1oy3d_          85 ACRVRAHTCACVLLQPRPSHPRDASDTY---LTQSQD-----------------CTP----DTSHAPAAVDSQPNPENEE  140 (255)
T ss_dssp             HTTTTCHHHHHHHSSSCCSSCCCC--------------------------------------------------------
T ss_pred             HHCCCCHHHHHHHHHHCCCHHCCCCHHH---HHHHHH-----------------HCC----CCHHHHHHHHHHCCHHHHH
T ss_conf             3226825899999861420101220256---667765-----------------224----3067799998620306789


Q ss_pred             HHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCC
Q ss_conf             99984489886446999971999999819799999999879997667778983877999717906999999997552089
Q 004504          460 KALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGN  539 (748)
Q Consensus       460 ~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~  539 (748)
                      ..+......+++.++..|.||||+|+..++.+++++|++.+++++..                                 
T Consensus       141 ~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~---------------------------------  187 (255)
T d1oy3d_         141 EPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKP---------------------------------  187 (255)
T ss_dssp             ---CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCC---------------------------------
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC---------------------------------
T ss_conf             98765328663310046763223332232222221000013331221---------------------------------


Q ss_pred             CCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf             889985399999964999999999969999999999999498999981998999999959999
Q 004504          540 RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV  602 (748)
Q Consensus       540 ~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~  602 (748)
                      .+..|.||||+|++.++.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++||+
T Consensus       188 ~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin~~d~~g~t~L~~A~~~~~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         188 EPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAP  250 (255)
T ss_dssp             CTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf             334443322001233399999999987899888799999999999987889999999976989

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4e-42  Score=249.85  Aligned_cols=242  Identities=21%  Similarity=0.224  Sum_probs=168.3

Q ss_pred             CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf             888988189999974999999999976999---88889999738899997599889999998499987533589983233
Q 004504          336 TQKTEFHPIHLAARLGYSTIVQSLIDSGCD---LNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSI  412 (748)
Q Consensus       336 ~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~  412 (748)
                      -+.+|.||||+|++.|+.+++++|+++|++   ++.++..|.||||+|+..++.+++++|+++|++++..+..|.+    
T Consensus         5 i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g~t----   80 (255)
T d1oy3d_           5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHT----   80 (255)
T ss_dssp             CCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCC----
T ss_pred             CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCH----
T ss_conf             8959978999999858899999999869990011575899997240687624543232222333332232222210----


Q ss_pred             HHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHH
Q ss_conf             11056540469999999983999999987787189999970999999999844898864469999719999998197999
Q 004504          413 AGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEV  492 (748)
Q Consensus       413 a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~  492 (748)
                                                       ||+.|+..++.+++++|++.... ...   .................
T Consensus        81 ---------------------------------pL~~A~~~~~~~~~~~Ll~~~~~-~~~---~~~~~~~~~~~~~~~~~  123 (255)
T d1oy3d_          81 ---------------------------------ALHLACRVRAHTCACVLLQPRPS-HPR---DASDTYLTQSQDCTPDT  123 (255)
T ss_dssp             ---------------------------------HHHHHTTTTCHHHHHHHSSSCCS-SCC---CC---------------
T ss_pred             ---------------------------------HHHHHHCCCCHHHHHHHHHHCCC-HHC---CCCHHHHHHHHHHCCCC
T ss_conf             ---------------------------------23333226825899999861420-101---22025666776522430


Q ss_pred             HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCC
Q ss_conf             99999879997667778983877999717906999999997552089889985399999964999999999969999999
Q 004504          493 FRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNV  572 (748)
Q Consensus       493 v~~Ll~~ga~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~n~  572 (748)
                      ....                 +..............+........+.++..|.||||+|+..++.+++++|++.+++.+.
T Consensus       124 ~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~  186 (255)
T d1oy3d_         124 SHAP-----------------AAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNK  186 (255)
T ss_dssp             -------------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTC
T ss_pred             HHHH-----------------HHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC
T ss_conf             6779-----------------99986203067899876532866331004676322333223222222100001333122


Q ss_pred             C-CCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf             9-999994989999819989999999599998999899985899998669997414787799999999939998
Q 004504          573 P-DGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGH  645 (748)
Q Consensus       573 ~-d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~L~~~ga~  645 (748)
                      . +..|.||||+|+..++.+++++|+++|+|++.+|..|+||||+|+..++.          +++++|+++||+
T Consensus       187 ~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin~~d~~g~t~L~~A~~~~~~----------~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         187 PEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNP----------ILARLLRAHGAP  250 (255)
T ss_dssp             CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCH----------HHHHHHHHTTCC
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH----------HHHHHHHHCCCC
T ss_conf             1334443322001233399999999987899888799999999999987889----------999999976989

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=100.00  E-value=5.6e-42  Score=249.01  Aligned_cols=232  Identities=25%  Similarity=0.321  Sum_probs=135.2

Q ss_pred             CHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf             18999997499999999997699988889999738899997599889999998499987533589983233110565404
Q 004504          342 HPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVG  421 (748)
Q Consensus       342 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~  421 (748)
                      |+|+.|+..|+.++|++|+++|++++..+.+|.||||+|+..|+.+++++|+++|++....+..                
T Consensus        42 t~l~~A~~~G~~~~v~~Ll~~Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~----------------  105 (291)
T d1s70b_          42 AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNE----------------  105 (291)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT----------------
T ss_pred             HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCC----------------
T ss_conf             6999999858899999999879998866899996999998619731211001222333332223----------------


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHC-C
Q ss_conf             699999999839999999877871899999709999999998448988644699997199999981979999999987-9
Q 004504          422 FQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYA-G  500 (748)
Q Consensus       422 ~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g  500 (748)
                                           +.+|++.++..++.++++.|++.+ ...+..+..+.+++++|+..++.+.++.++.. +
T Consensus       106 ---------------------~~~~L~~a~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~~~~  163 (291)
T d1s70b_         106 ---------------------GWIPLHAAASCGYLDIAEYLISQG-AHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQG  163 (291)
T ss_dssp             ---------------------SCCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHT
T ss_pred             ---------------------CCCCCCCCCCCCCCCHHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC
T ss_conf             ---------------------233333332222110011012467-6422222467642222111222000100000246


Q ss_pred             CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCH
Q ss_conf             99766777898387799971790699999999755208988998539999996499999999996999999999999949
Q 004504          501 ADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTP  580 (748)
Q Consensus       501 a~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~tp  580 (748)
                      .++......+..+.        .......+..........+..|.||||.|+..|+.+++++|++.|+++|.++..|.||
T Consensus       164 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~~~~~g~Tp  235 (291)
T d1s70b_         164 VDIEAARKEEERIM--------LRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTP  235 (291)
T ss_dssp             CCHHHHHHHHHHHH--------HHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCH
T ss_pred             CCCCCCCCCCCCCC--------CCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCCCEECCCCCCCCCCCH
T ss_conf             53211000013332--------2110011012321100246789873048887699544101344101124212579889


Q ss_pred             HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             899998199899999995999989998999858999986
Q 004504          581 LMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARK  619 (748)
Q Consensus       581 L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~a~~  619 (748)
                      ||+|+..|+.++|++|+++|||++++|..|+||||+|++
T Consensus       236 L~~A~~~g~~~iv~lLl~~Gadv~~~d~~G~TaL~~A~e  274 (291)
T d1s70b_         236 LHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE  274 (291)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred             HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
T ss_conf             999998598999999998799998868999999999999

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-40  Score=239.45  Aligned_cols=219  Identities=26%  Similarity=0.314  Sum_probs=167.9

Q ss_pred             CCCHHHHHHHCCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf             881899999749999999999-7699988889999738899997599889999998499987533589983233110565
Q 004504          340 EFHPIHLAARLGYSTIVQSLI-DSGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWW  418 (748)
Q Consensus       340 ~~t~L~~A~~~g~~~iv~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~  418 (748)
                      +.+.++.++..|+.+.++.++ +.+..++.+|..|+||||+|+..|+.+++++|+..+.+.......+            
T Consensus         3 ~~~~~~~~a~~G~~~~v~~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~~~~------------   70 (223)
T d1uoha_           3 SNLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAG------------   70 (223)
T ss_dssp             SSSHHHHHHHTTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTC------------
T ss_pred             CHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC------------
T ss_conf             77999999996999999999994997476748999888999998511024332222233333222222------------


Q ss_pred             CCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH
Q ss_conf             40469999999983999999987787189999970999999999844898864469999719999998197999999998
Q 004504          419 SVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVY  498 (748)
Q Consensus       419 ~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~  498 (748)
                                               .++++.++..++.+++++|++++ .+++..+..|.||||+|+..++.+++++|++
T Consensus        71 -------------------------~~~~~~~~~~~~~~i~~~Ll~~~-~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~  124 (223)
T d1uoha_          71 -------------------------WSPLHIAASAGRDEIVKALLGKG-AQVNAVNQNGCTPLHYAASKNRHEIAVMLLE  124 (223)
T ss_dssp             -------------------------CCHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred             -------------------------CCCCCCCCCCCCCCHHHHHHCCC-CEEEEECCCCCCHHHHHHHCCCHHHHHHHHH
T ss_conf             -------------------------23322222211110167774068-6467548999966269887698999999998


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             79997667778983877999717906999999997552089889985399999964999999999969999999999999
Q 004504          499 AGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGY  578 (748)
Q Consensus       499 ~ga~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~  578 (748)
                      +|++++..+..                                  |.||||+|+..++.+++++|++.+.+++.+|..|.
T Consensus       125 ~g~d~~~~~~~----------------------------------~~t~L~~a~~~~~~~~~~~L~~~~~~i~~~d~~g~  170 (223)
T d1uoha_         125 GGANPDAKDHY----------------------------------EATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGN  170 (223)
T ss_dssp             TTCCTTCCCTT----------------------------------SCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTCC
T ss_pred             CCCCCCCCCCC----------------------------------CCCCCHHHHHCCCCCHHHHHCCCCCEEEECCCCCC
T ss_conf             78999876899----------------------------------99501023213874202332022320120368887


Q ss_pred             CHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             498999981998999999959999899989998589999866999741478779999999993
Q 004504          579 TPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVL  641 (748)
Q Consensus       579 tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~L~~  641 (748)
                      ||||+|+..|+.+++++|+++|||++.+|..|+||||+|. . +.         .++++.|++
T Consensus       171 TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d~~g~tpl~~A~-~-~~---------~~i~~~Ll~  222 (223)
T d1uoha_         171 TPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAK-G-GL---------GLILKRMVE  222 (223)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHCC-T-TH---------HHHHHHHHC
T ss_pred             CEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH-C-CC---------HHHHHCCCC
T ss_conf             4112100258499999999877999887999999999987-7-89---------999830047

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.5e-41  Score=244.56  Aligned_cols=94  Identities=32%  Similarity=0.434  Sum_probs=60.4

Q ss_pred             CCCCCCCCHHHHHHHHCCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf             898899853999999649999999999-6999999999999949899998199899999995999989998999858999
Q 004504          538 GNRNAGGFYALHCAARRGDLDAVRLLT-SRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSL  616 (748)
Q Consensus       538 ~~~~~~g~t~Lh~A~~~~~~~~v~~Ll-~~g~~~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~  616 (748)
                      ...+..|.|+||+++..++.+++++++ ..+.+++.+|..|.||||+|+..|+.+++++|+++|+|+|.+|..|+||||+
T Consensus       181 ~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d~~G~T~L~~  260 (277)
T d2fo1e1         181 DSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQL  260 (277)
T ss_dssp             SSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
T ss_conf             54466898700001223332222232223454333468999989999998598999999998769998869999999999


Q ss_pred             HHHCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             9866999741478779999999993
Q 004504          617 ARKNSSMKNDAELVILDEVARMLVL  641 (748)
Q Consensus       617 a~~~~~~~~~~~~~~~~~~~~~L~~  641 (748)
                      |+..++.          +++++|..
T Consensus       261 A~~~~~~----------~iv~lL~~  275 (277)
T d2fo1e1         261 AQANNHH----------NIVDIFDR  275 (277)
T ss_dssp             HHHTTCH----------HHHHHHHT
T ss_pred             HHHCCCH----------HHHHHHHH
T ss_conf             9985989----------99999997

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=3.3e-40  Score=239.07  Aligned_cols=230  Identities=21%  Similarity=0.255  Sum_probs=130.1

Q ss_pred             CCHHHHHHHHCCCHHHHHH--------HHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             7419999998499999999--------99689998898668889881899999749999999999769998888999973
Q 004504          304 GRTLLHHAILCGCTGAVAV--------LLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGET  375 (748)
Q Consensus       304 g~t~L~~A~~~g~~~~v~~--------Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t  375 (748)
                      |+||||+|+..|+.+++++        +++.|++++.   .+..|.||||+|+..|+.+++++|+++|++++.++..|.|
T Consensus        33 g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn~---~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t  109 (277)
T d2fo1e1          33 NRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNA---MDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERS  109 (277)
T ss_dssp             CCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTC---CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCC
T ss_pred             CCCHHHHHHHCCCHHHHHHHHHCCHHHHHHCCCCCCC---CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             9669999998689999999996523679876997645---4788885100343333333333332232223322222222


Q ss_pred             HHHHHHHCCCHHHHHHHHHCCC---CCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             8899997599889999998499---9875335899832331105654046999999998399999998778718999997
Q 004504          376 ALMISAKYKQEECVKVLAKAGA---DFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQ  452 (748)
Q Consensus       376 ~L~~A~~~~~~~~v~~Ll~~g~---~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~  452 (748)
                      |++.|+..++.++++++...+.   .++..+...                                     .++.+.+..
T Consensus       110 ~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~  152 (277)
T d2fo1e1         110 ALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNG-------------------------------------MTALMIVAH  152 (277)
T ss_dssp             HHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTS-------------------------------------CCHHHHHHH
T ss_pred             CCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCC-------------------------------------CHHHHHHHH
T ss_conf             2210011000012344431145422222222211-------------------------------------036788875


Q ss_pred             CCCHH---HHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Q ss_conf             09999---999998448988644699997199999981979999999987999766777898387799971790699999
Q 004504          453 AGDIA---ALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKV  529 (748)
Q Consensus       453 ~~~~~---~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~a~~~~~~~~~~~l  529 (748)
                      ....+   .+..+....... ..                         ......+..+..|.|+||+++..++.+.++.+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~-~~-------------------------~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~  206 (277)
T d2fo1e1         153 NEGRDQVASAKLLVEKGAKV-DY-------------------------DGAARKDSEKYKGRTALHYAAQVSNMPIVKYL  206 (277)
T ss_dssp             SCSTTHHHHHHHHHHHTCCS-SC-------------------------CSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCC-CC-------------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             03433222221001123322-22-------------------------22345554466898700001223332222232


Q ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC
Q ss_conf             9997552089889985399999964999999999969999999999999498999981998999999959
Q 004504          530 MLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISN  599 (748)
Q Consensus       530 l~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~  599 (748)
                      +...+.+.+..+..|+||||+|+..|+.+++++|+++|+|+|.+|..|.||||+|+..|+.+++++|++.
T Consensus       207 l~~~~~~~~~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d~~G~T~L~~A~~~~~~~iv~lL~~c  276 (277)
T d2fo1e1         207 VGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRC  276 (277)
T ss_dssp             HHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHH
T ss_conf             2234543334689999899999985989999999987699988699999999999985989999999971

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2e-39  Score=234.64  Aligned_cols=224  Identities=27%  Similarity=0.366  Sum_probs=176.3

Q ss_pred             CCHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf             8189999974999999999976-999888899997388999975998899999984999875335899832331105654
Q 004504          341 FHPIHLAARLGYSTIVQSLIDS-GCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWS  419 (748)
Q Consensus       341 ~t~L~~A~~~g~~~iv~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~  419 (748)
                      .+|||+|+..|+.++++.|++. +.+++.++.+|.||||+|+..++.+++++|+++|++++..+.               
T Consensus         1 n~pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~---------------   65 (229)
T d1ixva_           1 NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDY---------------   65 (229)
T ss_dssp             CCHHHHHHHHTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGC---------------
T ss_pred             CHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCC---------------
T ss_conf             97699999868999999999809986656599999899999986996544135443012333222---------------


Q ss_pred             CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC-CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH
Q ss_conf             046999999998399999998778718999997099999999984489-8864469999719999998197999999998
Q 004504          420 VGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREE-LNLDYQDDNGFSAVMVAASKGHVEVFRELVY  498 (748)
Q Consensus       420 ~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~~-~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~  498 (748)
                                         .+..|.++++++...+..++++.++..+. ......+..+.++++.++..++.++++.|++
T Consensus        66 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~  126 (229)
T d1ixva_          66 -------------------PDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIE  126 (229)
T ss_dssp             -------------------CCTTSCCHHHHHHHHTCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             -------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             -------------------3222222222111123323333322222222222232233443322123200343222211


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCC
Q ss_conf             799976677789838779997179069999999975520898899853999999649999999999699-9999999999
Q 004504          499 AGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRG-YGVNVPDGDG  577 (748)
Q Consensus       499 ~ga~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~~~n~~d~~g  577 (748)
                      .|.+.+..+..                                  |+||||+|+..|+.+++++|++.+ .+++.+|..|
T Consensus       127 ~~~~~~~~~~~----------------------------------g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g  172 (229)
T d1ixva_         127 NGASVRIKDKF----------------------------------NQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQG  172 (229)
T ss_dssp             TTCCSCCCCTT----------------------------------SCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTS
T ss_pred             HCCCCCCCCCC----------------------------------CCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             00232124788----------------------------------99735023212453323333222222222356666


Q ss_pred             CCHHHHHHHCCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf             949899998199899999995-99998999899985899998669997414787799999999939998
Q 004504          578 YTPLMLAAREGHGPMCELLIS-NGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVARMLVLGGGH  645 (748)
Q Consensus       578 ~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~L~~~ga~  645 (748)
                      .||||+|+..|+.+++++|++ .|+|++++|..|+|||++|+..             +++++|+++|+|
T Consensus       173 ~TpLh~A~~~~~~~~v~~Ll~~~gad~~~~d~~g~t~l~~A~~~-------------~~~~~Ll~~g~d  228 (229)
T d1ixva_         173 WTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE-------------QVKKFFLNNVVD  228 (229)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHHCCCSCCCCTTSCCTGGGCSCH-------------HHHHHHHHHCCC
T ss_pred             CCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH-------------HHHHHHHHCCCC
T ss_conf             78102210125199999999965999888589999999998467-------------899999976999

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-39  Score=234.79  Aligned_cols=217  Identities=25%  Similarity=0.359  Sum_probs=89.1

Q ss_pred             HHHHHHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
Q ss_conf             199999984999999999968-9998898668889881899999749999999999769998888999973889999759
Q 004504          306 TLLHHAILCGCTGAVAVLLSC-GADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYK  384 (748)
Q Consensus       306 t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~  384 (748)
                      +.++.++..|+.+.++.++.. +..++   ..+..|+||||+|+..|+.+++++|++.+.+....+..+.++++.++..+
T Consensus         5 ~~~~~~a~~G~~~~v~~~l~~~~~~~~---~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   81 (223)
T d1uoha_           5 LMVCNLAYSGKLEELKESILADKSLAT---RTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAG   81 (223)
T ss_dssp             SHHHHHHHTTCHHHHHHHHHHCGGGGG---CCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTCCCHHHHHHHHT
T ss_pred             HHHHHHHHHCCHHHHHHHHHHCCCCCC---CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             999999996999999999994997476---74899988899999851102433222223333322222223322222211


Q ss_pred             CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
Q ss_conf             98899999984999875335899832331105654046999999998399999998778718999997099999999984
Q 004504          385 QEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIG  464 (748)
Q Consensus       385 ~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~  464 (748)
                      +.+++++|+++|++++..+..|.                                     ||||+|+..++.+++++|++
T Consensus        82 ~~~i~~~Ll~~~~d~~~~d~~g~-------------------------------------tpL~~A~~~~~~e~~~~Ll~  124 (223)
T d1uoha_          82 RDEIVKALLGKGAQVNAVNQNGC-------------------------------------TPLHYAASKNRHEIAVMLLE  124 (223)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTCC-------------------------------------CHHHHHHHHTCHHHHHHHHH
T ss_pred             CCCHHHHHHCCCCEEEEECCCCC-------------------------------------CHHHHHHHCCCHHHHHHHHH
T ss_conf             11016777406864675489999-------------------------------------66269887698999999998


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf             48988644699997199999981979999999987999766777898387799971790699999999755208988998
Q 004504          465 REELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGG  544 (748)
Q Consensus       465 ~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g  544 (748)
                      .+ .+++..+..|.||||+|+..++.+++++|++.+.+++..+..|                                  
T Consensus       125 ~g-~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i~~~d~~g----------------------------------  169 (223)
T d1uoha_         125 GG-ANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEG----------------------------------  169 (223)
T ss_dssp             TT-CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTC----------------------------------
T ss_pred             CC-CCCCCCCCCCCCCCHHHHHCCCCCHHHHHCCCCCEEEECCCCC----------------------------------
T ss_conf             78-9998768999950102321387420233202232012036888----------------------------------


Q ss_pred             CHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
Q ss_conf             539999996499999999996999999999999949899998199899999995
Q 004504          545 FYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLIS  598 (748)
Q Consensus       545 ~t~Lh~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~  598 (748)
                      +||||.|+..|+.+++++|+++|+|++.+|..|+||||+| ..|+.+++++||+
T Consensus       170 ~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d~~g~tpl~~A-~~~~~~i~~~Ll~  222 (223)
T d1uoha_         170 NTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA-KGGLGLILKRMVE  222 (223)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHC-CTTHHHHHHHHHC
T ss_pred             CCEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH-HCCCHHHHHCCCC
T ss_conf             7411210025849999999987799988799999999998-7789999830047

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=100.00  E-value=3.9e-38  Score=227.44  Aligned_cols=119  Identities=22%  Similarity=0.306  Sum_probs=52.9

Q ss_pred             CHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCH-HHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHH
Q ss_conf             1499999960999999999976999875655672-678999809499999999769998531129999994086999999
Q 004504           81 VTALFLAAHSGNVTLVKKLLSTGADVNQKLFRGF-ATTIAVREGHLEILEILLKAGASQPACEEALLEASCHGQARLAEL  159 (748)
Q Consensus        81 ~t~L~~A~~~g~~~iv~~Ll~~ga~~n~~~~~g~-~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~l~~A~~~g~~~~v~~  159 (748)
                      .|+|+.||..|+.++|++|+++|+++|..+..|. ||++|+.+|+.+++++|+++|++...                   
T Consensus        41 ~t~l~~A~~~G~~~~v~~Ll~~Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~-------------------  101 (291)
T d1s70b_          41 GAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQ-------------------  101 (291)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTC-------------------
T ss_pred             CHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCC-------------------
T ss_conf             6699999985889999999987999886689999699999861973121100122233333-------------------


Q ss_pred             HHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
Q ss_conf             8308988877665178997611998799999987999762103564202876557889987899998399999999998
Q 004504          160 LMGSDLIRPHVAVHSLVTACCRGFVDVVDTLMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQ  238 (748)
Q Consensus       160 L~~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~g~d~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~  238 (748)
                             ....+.+||+.++..++.++++.|+++|+..+..+.             .+.+++++|+..++.+.++.+++
T Consensus       102 -------~~~~~~~~L~~a~~~~~~~~~~~l~~~~~~~~~~~~-------------~~~~~~~~a~~~~~~~~~~~ll~  160 (291)
T d1s70b_         102 -------PDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNS-------------EGDTPLDIAEEEAMEELLQNEVN  160 (291)
T ss_dssp             -------CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-------------TSCCHHHHCCSHHHHHHHHHHHH
T ss_pred             -------CCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC-------------CCCCCCCCCCCCCCCHHCCCCCC
T ss_conf             -------222323333333222211001101246764222224-------------67642222111222000100000

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=5e-37  Score=221.20  Aligned_cols=221  Identities=20%  Similarity=0.158  Sum_probs=102.6

Q ss_pred             HHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC---CCCCCCCCHHHHHH
Q ss_conf             1999999849999999999689-9988986688898818999997499999999997699988---88999973889999
Q 004504          306 TLLHHAILCGCTGAVAVLLSCG-ADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLN---TKTESGETALMISA  381 (748)
Q Consensus       306 t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~---~~~~~g~t~L~~A~  381 (748)
                      +|||+|+..|+.++++.|++.. .+++   ..+..|.||||+|+..|+.+++++|+++|++++   ..+..|.+|++++.
T Consensus         2 ~pLh~A~~~g~~~~v~~Ll~~~~~~~~---~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~   78 (229)
T d1ixva_           2 YPLHQACMENEFFKVQELLHSKPSLLL---QKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIAC   78 (229)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHHCGGGTT---CCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHCCCCCCC---CCCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
T ss_conf             769999986899999999980998665---65999998999999869965441354430123332223222222222111


Q ss_pred             HCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
Q ss_conf             75998899999984999875335899832331105654046999999998399999998778718999997099999999
Q 004504          382 KYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKA  461 (748)
Q Consensus       382 ~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~  461 (748)
                      ..+..++++.++..+......                                   ..+..+.++++.++..++.++++.
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~l~~~~~~~~~~~~~~  123 (229)
T d1ixva_          79 SVGNLEVVKSLYDRPLKPDLN-----------------------------------KITNQGVTCLHLAVGKKWFEVSQF  123 (229)
T ss_dssp             HHTCHHHHHHHHSSSSCCCTT-----------------------------------CCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCC-----------------------------------CCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             123323333322222222222-----------------------------------232233443322123200343222


Q ss_pred             HHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCC
Q ss_conf             984489886446999971999999819799999999879-9976677789838779997179069999999975520898
Q 004504          462 LIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAG-ADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNR  540 (748)
Q Consensus       462 Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-a~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~  540 (748)
                      |++.+ ...+..+..|.||||+|+..|+.++++.|++.+ .+++.++.                                
T Consensus       124 l~~~~-~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~--------------------------------  170 (229)
T d1ixva_         124 LIENG-ASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDK--------------------------------  170 (229)
T ss_dssp             HHHTT-CCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCT--------------------------------
T ss_pred             HHHHC-CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC--------------------------------
T ss_conf             21100-232124788997350232124533233332222222223566--------------------------------


Q ss_pred             CCCCCHHHHHHHHCCCHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf             8998539999996499999999996-9999999999999498999981998999999959999
Q 004504          541 NAGGFYALHCAARRGDLDAVRLLTS-RGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV  602 (748)
Q Consensus       541 ~~~g~t~Lh~A~~~~~~~~v~~Ll~-~g~~~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~  602 (748)
                        .|+||||+|+..|+.+++++|++ .|+|++.+|..|.||||+|+.   .+++++|+++|+|
T Consensus       171 --~g~TpLh~A~~~~~~~~v~~Ll~~~gad~~~~d~~g~t~l~~A~~---~~~~~~Ll~~g~d  228 (229)
T d1ixva_         171 --QGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLNNVVD  228 (229)
T ss_dssp             --TSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCCCTTSCCTGGGCSC---HHHHHHHHHHCCC
T ss_pred             --CCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH---HHHHHHHHHCCCC
T ss_conf             --667810221012519999999996599988858999999999846---7899999976999

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-34  Score=205.47  Aligned_cols=211  Identities=26%  Similarity=0.351  Sum_probs=116.9

Q ss_pred             CCCHHHHHHHCCCHHHHHHHHH----CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHC
Q ss_conf             8818999997499999999997----699988889999738899997599889999998499987533589983233110
Q 004504          340 EFHPIHLAARLGYSTIVQSLID----SGCDLNTKTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGS  415 (748)
Q Consensus       340 ~~t~L~~A~~~g~~~iv~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~  415 (748)
                      |.||||+|+..|+.+++++|++    .|++++.++..|.||||+|+..++.+++++|+++|++.+.....+.+       
T Consensus         3 G~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~-------   75 (228)
T d1k1aa_           3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQT-------   75 (228)
T ss_dssp             TCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-------
T ss_pred             CCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCC-------
T ss_conf             8429999998399999999999899779977766899996241000135533333332222233433332223-------


Q ss_pred             CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC---CCCCCCCCCCCHHHHHHHHCCCHHH
Q ss_conf             5654046999999998399999998778718999997099999999984489---8864469999719999998197999
Q 004504          416 NWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREE---LNLDYQDDNGFSAVMVAASKGHVEV  492 (748)
Q Consensus       416 ~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~~---~~~~~~~~~g~t~L~~A~~~g~~~~  492 (748)
                                                    +++.+...++.+.++.+.....   ...+.......++++.+........
T Consensus        76 ------------------------------~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  125 (228)
T d1k1aa_          76 ------------------------------AAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQET  125 (228)
T ss_dssp             ------------------------------HHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred             ------------------------------CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf             ------------------------------33222223452100234420454322322333322222222222221001


Q ss_pred             HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCC
Q ss_conf             99999879997667778983877999717906999999997552089889985399999964999999999969999999
Q 004504          493 FRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNV  572 (748)
Q Consensus       493 v~~Ll~~ga~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~n~  572 (748)
                      .+.|.....+...                                 .....+.++++.|+..+...+++.+++.|.+++.
T Consensus       126 ~~~l~~~~~~~~~---------------------------------~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~  172 (228)
T d1k1aa_         126 VQLLLERGADIDA---------------------------------VDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNA  172 (228)
T ss_dssp             HHHHHHTTCCTTC---------------------------------CCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred             HHHHHCCCCCCCC---------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             3443001233222---------------------------------2100025578898875100234432220223222


Q ss_pred             CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Q ss_conf             999999498999981998999999959999899989998589999866
Q 004504          573 PDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKN  620 (748)
Q Consensus       573 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~a~~~  620 (748)
                      +|..|.||||+|+..|+.+++++|+++|||++++|..|.||||+|+.+
T Consensus       173 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d~~G~TpL~~A~~~  220 (228)
T d1k1aa_         173 QMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSR  220 (228)
T ss_dssp             BCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSH
T ss_pred             CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
T ss_conf             123686168999985879999999987899988789999999999868

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=4.6e-34  Score=204.56  Aligned_cols=199  Identities=28%  Similarity=0.406  Sum_probs=117.8

Q ss_pred             HHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             9999999976999888-899997388999975998899999984999875335899832331105654046999999998
Q 004504          353 STIVQSLIDSGCDLNT-KTESGETALMISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIR  431 (748)
Q Consensus       353 ~~iv~~Ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~l~~  431 (748)
                      .|+|++|+++|++++. .|.+|.||||+|+..|+.+++++|++.|++++..+..+.+                       
T Consensus         2 ~~~v~~Ll~~g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~~-----------------------   58 (209)
T d1ot8a_           2 AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRT-----------------------   58 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC-----------------------
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC-----------------------
T ss_conf             899999998789868676999988999999839999999987502233222222222-----------------------


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             39999999877871899999709999999998448988644699997199999981979999999987999766777898
Q 004504          432 SGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGK  511 (748)
Q Consensus       432 ~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~  511 (748)
                                    +++.++..++.....................+.++.+.+.........+.|...+++++..+..|.
T Consensus        59 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~  124 (209)
T d1ot8a_          59 --------------PLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGK  124 (209)
T ss_dssp             --------------HHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSC
T ss_pred             --------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
T ss_conf             --------------222222222222222222222222322222233322222222101235555310146555577999


Q ss_pred             CHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHH
Q ss_conf             38779997179069999999975520898899853999999649999999999699999999999994989999819989
Q 004504          512 TAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGP  591 (748)
Q Consensus       512 t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~tpL~~A~~~~~~~  591 (748)
                                                        |||+.++..+..++++.+++.+.+++..|..|.||||+|+..|+.+
T Consensus       125 ----------------------------------t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~~A~~~g~~~  170 (209)
T d1ot8a_         125 ----------------------------------TALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYE  170 (209)
T ss_dssp             ----------------------------------BHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred             ----------------------------------CCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHCCCCHHH
T ss_conf             ----------------------------------8230000368631453201222234544344455211210324999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC
Q ss_conf             9999995999989998999858999986699
Q 004504          592 MCELLISNGAVCDIKNARGETALSLARKNSS  622 (748)
Q Consensus       592 ~v~~Ll~~ga~~~~~d~~g~t~L~~a~~~~~  622 (748)
                      ++++|+++|||++.+|..|.||||+|+..+.
T Consensus       171 ~v~~Ll~~gad~n~~d~~g~Tpl~~A~~~~~  201 (209)
T d1ot8a_         171 ASKALLDNFANREITDHMDRLPRDVASERLH  201 (209)
T ss_dssp             HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCC
T ss_conf             9999998799998868999999999998687

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-33  Score=201.87  Aligned_cols=222  Identities=24%  Similarity=0.276  Sum_probs=156.5

Q ss_pred             CCCHHHHHHHHCCCHHHHHHHHH----CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf             87419999998499999999996----89998898668889881899999749999999999769998888999973889
Q 004504          303 YGRTLLHHAILCGCTGAVAVLLS----CGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALM  378 (748)
Q Consensus       303 ~g~t~L~~A~~~g~~~~v~~Ll~----~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~  378 (748)
                      +|.||||+|+..|+.++++.|++    .|++++.   .+..|.||||+|+..|+.+++++|+++|++.+.....+.++++
T Consensus         2 dG~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~---~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~   78 (228)
T d1k1aa_           2 DGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDI---YNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAH   78 (228)
T ss_dssp             TTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCC---CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred             CCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC---CCCCCCCCCEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             8842999999839999999999989977997776---6899996241000135533333332222233433332223332


Q ss_pred             HHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHH
Q ss_conf             99975998899999984999875335899832331105654046999999998399999998778718999997099999
Q 004504          379 ISAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAA  458 (748)
Q Consensus       379 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~  458 (748)
                      .|....+.++++.+..........                                 .+.......++++.+........
T Consensus        79 ~a~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~l~~~~~~~~~~~  125 (228)
T d1k1aa_          79 LACEHRSPTCLRALLDSAAPGTLD---------------------------------LEARNYDGLTALHVAVNTECQET  125 (228)
T ss_dssp             HHHHTTCHHHHHHHHHHSCTTSCC---------------------------------TTCCCTTSCCHHHHHHHHTCHHH
T ss_pred             CCCCCCCCCCHHHHHHCCCCCCCC---------------------------------CCCCCCCCCCCCCCCCCCCCCHH
T ss_conf             222234521002344204543223---------------------------------22333322222222222221001


Q ss_pred             HHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCC
Q ss_conf             99998448988644699997199999981979999999987999766777898387799971790699999999755208
Q 004504          459 LKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKG  538 (748)
Q Consensus       459 v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~  538 (748)
                      .+.+..............+.++++.|+..+...+++.+++.|.+++.++..                             
T Consensus       126 ~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~d~~-----------------------------  176 (228)
T d1k1aa_         126 VQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYS-----------------------------  176 (228)
T ss_dssp             HHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTT-----------------------------
T ss_pred             HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----------------------------
T ss_conf             344300123322221000255788988751002344322202232221236-----------------------------


Q ss_pred             CCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Q ss_conf             98899853999999649999999999699999999999994989999819989999
Q 004504          539 NRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCE  594 (748)
Q Consensus       539 ~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~tpL~~A~~~~~~~~v~  594 (748)
                           |.||||+|+..|+.+++++|+++|+|+|.+|.+|.||||+|+++|+.++||
T Consensus       177 -----g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d~~G~TpL~~A~~~~~~divk  227 (228)
T d1k1aa_         177 -----GSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR  227 (228)
T ss_dssp             -----SCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred             -----CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
T ss_conf             -----861689999858799999999878999887899999999998687703538

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-35  Score=210.30  Aligned_cols=168  Identities=23%  Similarity=0.217  Sum_probs=104.9

Q ss_pred             CCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHH-----HHCCCCCC
Q ss_conf             8864469999719999998197999999998799976677789838779997179069999999975-----52089889
Q 004504          468 LNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFA-----LEKGNRNA  542 (748)
Q Consensus       468 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~-----~~~~~~~~  542 (748)
                      .+++.++.+|.||||+|+..++.+++++|++.|++++..+..|.+||+.++..++.++++.++....     ........
T Consensus        30 ~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  109 (221)
T d1iknd_          30 AFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNY  109 (221)
T ss_dssp             CCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCT
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCC
T ss_conf             97536789999546343343322233332222222222322322222223332222211101110132333222222233


Q ss_pred             CCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
Q ss_conf             98539999996499999999996999999999-99994989999819989999999599998999899985899998669
Q 004504          543 GGFYALHCAARRGDLDAVRLLTSRGYGVNVPD-GDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNS  621 (748)
Q Consensus       543 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~n~~d-~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~a~~~~  621 (748)
                      .|.||||.|+..++.+++++|++.|++++..+ .+|.||||+|+..|+.+++++|+++|+|++.+|..|.|||++|+..+
T Consensus       110 ~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad~~~~~~~G~tpl~~A~~~~  189 (221)
T d1iknd_         110 NGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRP  189 (221)
T ss_dssp             TCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSS
T ss_pred             CCCHHHHHHHHCCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf             43213567755598223010013686311224467778431111222489888898638864566999989999999878


Q ss_pred             CCCCHHHHHHHHHHHHHHHHCCCC
Q ss_conf             997414787799999999939998
Q 004504          622 SMKNDAELVILDEVARMLVLGGGH  645 (748)
Q Consensus       622 ~~~~~~~~~~~~~~~~~L~~~ga~  645 (748)
                      ..          +++++|++.+.+
T Consensus       190 ~~----------~~~~~l~~~~~~  203 (221)
T d1iknd_         190 ST----------RIQQQLGQLTLE  203 (221)
T ss_dssp             CH----------HHHHHHHTTSCG
T ss_pred             CH----------HHHHHHHHCCCC
T ss_conf             89----------999999982873

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=100.00  E-value=6.4e-36  Score=214.99  Aligned_cols=130  Identities=13%  Similarity=0.085  Sum_probs=65.4

Q ss_pred             CCCCHHHHHHHCCCHHHHHH---HHHCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCC
Q ss_conf             66517899761199879999---998799976210356420287655788998789999839999999999869998721
Q 004504          170 VAVHSLVTACCRGFVDVVDT---LMKCGVDINATDRLLLQSLKPSLHTNVDCSALVAAVVSRQVSVVQLLLQAGANTDMK  246 (748)
Q Consensus       170 ~~~~~L~~A~~~g~~~~v~~---Ll~~g~d~n~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~  246 (748)
                      .+.|+|+.|+.+|+.+++++   |++.|+++|..+..             |.||||+|+.+|+.++|++|+++|++++..
T Consensus        89 ~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~-------------g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~  155 (346)
T d2ajaa1          89 KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAE-------------NYQAFRLAAENGHLHVLNRLCELAPTEIMA  155 (346)
T ss_dssp             CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHH-------------HHHHHHHHHHTTCHHHHHHHHHSCTTTHHH
T ss_pred             CCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCC-------------CCCHHHHHHHCCCHHHHHHHHHCCCCCCCC
T ss_conf             8884999999859988999999998389855336899-------------997999999878999999999869970214


Q ss_pred             CCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHC
Q ss_conf             12587645677740135403567753110135797450198999996033899999874199999984999999999968
Q 004504          247 VRLGAWSWDTTTGEEFRVGAGLAEPYAITWCAVEYFEITGSILRMLLQHLSYNSPHYGRTLLHHAILCGCTGAVAVLLSC  326 (748)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Ll~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~  326 (748)
                      +.                                                    ...|.||||+|+..|+.++|++|++.
T Consensus       156 ~~----------------------------------------------------~~~g~t~L~~Aa~~g~~~iv~~Ll~~  183 (346)
T d2ajaa1         156 MI----------------------------------------------------QAENYHAFRLAAENGHLHVLNRLCEL  183 (346)
T ss_dssp             HH----------------------------------------------------SHHHHHHHHHHHHTTCHHHHHHHHHS
T ss_pred             CC----------------------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf             55----------------------------------------------------56998743899887567999999976


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC
Q ss_conf             99988986688898818999997499999999997699
Q 004504          327 GADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGC  364 (748)
Q Consensus       327 g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~  364 (748)
                      |++..........+.+|++.|+..|+.+++++|++.|+
T Consensus       184 ~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga  221 (346)
T d2ajaa1         184 APTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV  221 (346)
T ss_dssp             CGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH
T ss_pred             CCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCC
T ss_conf             99420120016899631157762488999999996899

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-33  Score=200.96  Aligned_cols=198  Identities=25%  Similarity=0.272  Sum_probs=125.0

Q ss_pred             CCHHHHHHHHCCCH----HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf             74199999984999----99999996899988986688898818999997499999999997699988889999738899
Q 004504          304 GRTLLHHAILCGCT----GAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMI  379 (748)
Q Consensus       304 g~t~L~~A~~~g~~----~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~  379 (748)
                      |.||||+|+..|+.    ++++++...+++++.   .+..|.||||+|+..|+.+++++|+++|++++..+..|.+||+.
T Consensus         2 G~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in~---~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~~   78 (221)
T d1iknd_           2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNF---QNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHL   78 (221)
T ss_dssp             CCCTTHHHHHTTCSSSSSCCCC-----CCCCCC---CCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHH
T ss_pred             CCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             872999999858999999999999867997536---78999954634334332223333222222222232232222222


Q ss_pred             HHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHH
Q ss_conf             99759988999999849998753358998323311056540469999999983999999987787189999970999999
Q 004504          380 SAKYKQEECVKVLAKAGADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAAL  459 (748)
Q Consensus       380 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v  459 (748)
                      ++..++.++++.|++.+......                                                         
T Consensus        79 ~~~~~~~~~~~~l~~~~~~~~~~---------------------------------------------------------  101 (221)
T d1iknd_          79 ACEQGCLASVGVLTQSCTTPHLH---------------------------------------------------------  101 (221)
T ss_dssp             HHHHTCHHHHHHHHHSTTTTSSS---------------------------------------------------------
T ss_pred             CCCCCCCCCCCHHHHHCCCCCCC---------------------------------------------------------
T ss_conf             33322222111011101323332---------------------------------------------------------


Q ss_pred             HHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCC
Q ss_conf             99984489886446999971999999819799999999879997667778983877999717906999999997552089
Q 004504          460 KALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGN  539 (748)
Q Consensus       460 ~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~  539 (748)
                              .........|.|||+.|+..++.+++++|+..|+.++..+                                
T Consensus       102 --------~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~--------------------------------  141 (221)
T d1iknd_         102 --------SILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQE--------------------------------  141 (221)
T ss_dssp             --------CGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCC--------------------------------
T ss_pred             --------CCCCCCCCCCCHHHHHHHHCCCHHHEEEECCCCCCCCCCC--------------------------------
T ss_conf             --------2222223343213567755598223010013686311224--------------------------------


Q ss_pred             CCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf             889985399999964999999999969999999999999498999981998999999959999
Q 004504          540 RNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAV  602 (748)
Q Consensus       540 ~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~  602 (748)
                       +..|.||||+|+..|+.+++++|+++|+|++.+|..|.||||+|+..++.+++++|++.+.+
T Consensus       142 -~~~G~T~L~~A~~~g~~~~v~~Ll~~gad~~~~~~~G~tpl~~A~~~~~~~~~~~l~~~~~~  203 (221)
T d1iknd_         142 -PCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE  203 (221)
T ss_dssp             -TTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCG
T ss_pred             -CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf             -46777843111122248988889863886456699998999999987889999999982873

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=7.3e-32  Score=192.22  Aligned_cols=207  Identities=23%  Similarity=0.272  Sum_probs=130.9

Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC
Q ss_conf             99999999689998898668889881899999749999999999769998888999973889999759988999999849
Q 004504          317 TGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKYKQEECVKVLAKAG  396 (748)
Q Consensus       317 ~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g  396 (748)
                      .++|++|+++|++++.  ..+..|.||||+|+..|+.+++++|++.|++++.++..+.++++.++...+...........
T Consensus         2 ~~~v~~Ll~~g~din~--~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (209)
T d1ot8a_           2 AQVISDLLAQGAELNA--TMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNR   79 (209)
T ss_dssp             HHHHHHHHHHHHHHHH--HHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCT
T ss_pred             HHHHHHHHHCCCCCCC--CCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             8999999987898686--76999988999999839999999987502233222222222222222222222222222222


Q ss_pred             CCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             99875335899832331105654046999999998399999998778718999997099999999984489886446999
Q 004504          397 ADFGLVSVSGQSASSIAGSNWWSVGFQRAVLDIIRSGNIPKSSNVAVFSPLMFVAQAGDIAALKALIGREELNLDYQDDN  476 (748)
Q Consensus       397 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~  476 (748)
                      .....                                    .....+.++.+.+.........+.|...+ .+++..+..
T Consensus        80 ~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~~~~  122 (209)
T d1ot8a_          80 ATNLN------------------------------------ARMHDGTTPLILAARLAIEGMVEDLITAD-ADINAADNS  122 (209)
T ss_dssp             TCCTT------------------------------------CCCTTCCCHHHHHHHTTCTTHHHHHHHTT-CCTTCBCTT
T ss_pred             CCCCC------------------------------------CCCCCCCCCCCCCCCCCCHHHHHHHHHHC-CCCCCCCCC
T ss_conf             22232------------------------------------22222333222222221012355553101-465555779


Q ss_pred             CCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC
Q ss_conf             97199999981979999999987999766777898387799971790699999999755208988998539999996499
Q 004504          477 GFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGD  556 (748)
Q Consensus       477 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~  556 (748)
                      |.|||+.++..+..++++.+++.+.+++..+..                                  |.||||+|+..|+
T Consensus       123 ~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~----------------------------------g~TpL~~A~~~g~  168 (209)
T d1ot8a_         123 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDK----------------------------------DETPLFLAAREGS  168 (209)
T ss_dssp             SCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT----------------------------------CCCHHHHHHHTTC
T ss_pred             CCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCC----------------------------------CCCCCCHHCCCCH
T ss_conf             998230000368631453201222234544344----------------------------------4552112103249


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Q ss_conf             9999999969999999999999498999981998999999
Q 004504          557 LDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELL  596 (748)
Q Consensus       557 ~~~v~~Ll~~g~~~n~~d~~g~tpL~~A~~~~~~~~v~~L  596 (748)
                      .+++++|+++|+|++.+|..|.||||+|+++|+.++|++|
T Consensus       169 ~~~v~~Ll~~gad~n~~d~~g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         169 YEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHC
T ss_conf             9999999987999988689999999999986879899643

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.98  E-value=1.3e-34  Score=207.74  Aligned_cols=54  Identities=31%  Similarity=0.249  Sum_probs=29.4

Q ss_pred             HHHHHHHHCCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHCCCHHHHHHHHHC
Q ss_conf             399999964999999999969999-----999999999498999981998999999959
Q 004504          546 YALHCAARRGDLDAVRLLTSRGYG-----VNVPDGDGYTPLMLAAREGHGPMCELLISN  599 (748)
Q Consensus       546 t~Lh~A~~~~~~~~v~~Ll~~g~~-----~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~  599 (748)
                      ++++.++..+..+++++|++.+..     .+..+.+|+||||+|++.|+.++|++||+.
T Consensus       281 ~~l~~a~~~~~ld~v~~Ll~~~~~~~~~~~~~~~~~g~T~LhlA~~~Gn~e~v~lLL~~  339 (346)
T d2ajaa1         281 RNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSI  339 (346)
T ss_dssp             HHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTS
T ss_pred             HHHHHHHCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHCC
T ss_conf             29999861795999999986867555364456799998199999984819999998589

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1e-31  Score=191.33  Aligned_cols=50  Identities=30%  Similarity=0.340  Sum_probs=45.6

Q ss_pred             CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf             99999999994989999819989999999599998999899985899998
Q 004504          569 GVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLAR  618 (748)
Q Consensus       569 ~~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~a~  618 (748)
                      .+|.+|..|+||||+|++.|+.++|++|+++|||++++|+.|.|||++|+
T Consensus       251 ~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         251 MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA  300 (301)
T ss_dssp             TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred             CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCC
T ss_conf             76687899988999999868799999999879999998999999999737

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.96  E-value=2.2e-29  Score=178.30  Aligned_cols=50  Identities=24%  Similarity=0.336  Sum_probs=38.5

Q ss_pred             HCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf             20898899853999999649999999999699999999999994989999
Q 004504          536 EKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAA  585 (748)
Q Consensus       536 ~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~tpL~~A~  585 (748)
                      .++.+|..|+||||+|++.|+.+++++|+++|+|++.+|..|.|||++|+
T Consensus       251 ~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         251 MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA  300 (301)
T ss_dssp             TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred             CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHCC
T ss_conf             76687899988999999868799999999879999998999999999737

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=2.4e-28  Score=172.47  Aligned_cols=150  Identities=25%  Similarity=0.264  Sum_probs=122.3

Q ss_pred             CHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCH
Q ss_conf             71999999819799999999879997667778983877999717906999999997552089889985399999964999
Q 004504          478 FSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDL  557 (748)
Q Consensus       478 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~  557 (748)
                      .|||+.|++.|+.+++++|+++|++++ .+..|+||||+|+..++.+.+..++..... ....+..+.++++.++...+.
T Consensus         3 ~t~L~~Aa~~g~~~~v~~LL~~ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~   80 (153)
T d1awcb_           3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-RDARTKVDRTPLHMAASEGHA   80 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-TTCCCTTCCCHHHHHHHHTCH
T ss_pred             CHHHHHHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCC
T ss_conf             979999998789999999998699834-244787533343232222222222222222-221222233323222233110


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf             99999996999999999999949899998199899999995999989998999858999986699974147877999999
Q 004504          558 DAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVAR  637 (748)
Q Consensus       558 ~~v~~Ll~~g~~~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~  637 (748)
                      +++++++.+|++++.+|..|.||||+|+..|+.+++++|+++|+|++.+|..|.|||++|+.+++.          ++++
T Consensus        81 ~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g~~----------eiv~  150 (153)
T d1awcb_          81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNE----------DLAE  150 (153)
T ss_dssp             HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH----------HHHH
T ss_pred             EEEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCH----------HHHH
T ss_conf             122122246876123224673477766430222412311434467726689899999999985999----------9998


Q ss_pred             HH
Q ss_conf             99
Q 004504          638 ML  639 (748)
Q Consensus       638 ~L  639 (748)
                      +|
T Consensus       151 lL  152 (153)
T d1awcb_         151 IL  152 (153)
T ss_dssp             HH
T ss_pred             HC
T ss_conf             67

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.8e-28  Score=172.08  Aligned_cols=139  Identities=36%  Similarity=0.519  Sum_probs=59.8

Q ss_pred             HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHH
Q ss_conf             89999970999999999844898864469999719999998197999999998799976677789838779997179069
Q 004504          446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDL  525 (748)
Q Consensus       446 ~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~a~~~~~~~~  525 (748)
                      +||.|+..|+.+++++|++++ ++++.++..|.||||+|+ .++.+++++|+++|++++..+..                
T Consensus         4 ~Lh~Aa~~g~~~~v~~Ll~~g-~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~----------------   65 (156)
T d1ihba_           4 ELASAAARGDLEQLTSLLQNN-VNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRT----------------   65 (156)
T ss_dssp             HHHHHHHHTCHHHHHHHTTSC-CCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTT----------------
T ss_pred             HHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC----------------
T ss_conf             999999867999999999878-796746774453212222-22222222222222222121235----------------


Q ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC-CCC
Q ss_conf             9999999755208988998539999996499999999996999999999999949899998199899999995999-989
Q 004504          526 FEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGA-VCD  604 (748)
Q Consensus       526 ~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga-~~~  604 (748)
                                        +.++++.++..++.+.+++|++.+.+++..+..|.+|||+|+..++.+++++|+++|+ +++
T Consensus        66 ------------------~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~  127 (156)
T d1ihba_          66 ------------------GFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVG  127 (156)
T ss_dssp             ------------------SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTT
T ss_pred             ------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             ------------------75322233222222222222112222223564432112233332212222222212201122


Q ss_pred             CCCCCCCCHHHHHHHC
Q ss_conf             9989998589999866
Q 004504          605 IKNARGETALSLARKN  620 (748)
Q Consensus       605 ~~d~~g~t~L~~a~~~  620 (748)
                      .+|..|.||||+|+..
T Consensus       128 ~~d~~g~TpL~~A~~~  143 (156)
T d1ihba_         128 HRNHKGDTACDLARLY  143 (156)
T ss_dssp             CCCTTSCCHHHHHHHT
T ss_pred             CCCCCCCCHHHHHHHC
T ss_conf             4589998999999983

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.2e-28  Score=170.55  Aligned_cols=151  Identities=32%  Similarity=0.446  Sum_probs=101.1

Q ss_pred             HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHH
Q ss_conf             89999970999999999844898864469999719999998197999999998799976677789838779997179069
Q 004504          446 PLMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDL  525 (748)
Q Consensus       446 ~L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~a~~~~~~~~  525 (748)
                      .|+.|+..|+.+.++.|++.++.+++..+..|.||||+|+ .++.+++++|++++++++..+..                
T Consensus         5 ~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~~~~~----------------   67 (156)
T d1bd8a_           5 RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTS----------------   67 (156)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCTTCCCTT----------------
T ss_pred             HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC----------------
T ss_conf             9999999589999999999589998864899984133432-22222222222222222222222----------------


Q ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
Q ss_conf             99999997552089889985399999964999999999969999999999999498999981998999999959999899
Q 004504          526 FEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDI  605 (748)
Q Consensus       526 ~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~  605 (748)
                                        |.+|++.++..++.+++++++++|+++|.+|..|.||||+|+..|+.+++++|+ .|++++.
T Consensus        68 ------------------~~~~l~~~~~~~~~~~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~  128 (156)
T d1bd8a_          68 ------------------GTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHR  128 (156)
T ss_dssp             ------------------SCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTC
T ss_pred             ------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCC
T ss_conf             ------------------222222222222222222222221221123677872221222233222211112-2256646


Q ss_pred             CCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf             9899985899998669997414787799999999939
Q 004504          606 KNARGETALSLARKNSSMKNDAELVILDEVARMLVLG  642 (748)
Q Consensus       606 ~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~L~~~  642 (748)
                      +|..|+||||+|+..+..          +++++|++|
T Consensus       129 ~d~~G~TpL~~A~~~g~~----------~iv~~Ll~h  155 (156)
T d1bd8a_         129 RDARGLTPLELALQRGAQ----------DLVDILQGH  155 (156)
T ss_dssp             CCTTSCCHHHHHHHSCCH----------HHHHHHHTT
T ss_pred             CCCCCCCHHHHHHHCCCH----------HHHHHHHHH
T ss_conf             689999999999985989----------999999966

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5e-28  Score=170.69  Aligned_cols=90  Identities=26%  Similarity=0.428  Sum_probs=37.9

Q ss_pred             CCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC-CCCCCCCCCCCHHHHHHH
Q ss_conf             7419999998499999999996899988986688898818999997499999999997699-988889999738899997
Q 004504          304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGC-DLNTKTESGETALMISAK  382 (748)
Q Consensus       304 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~-~~~~~~~~g~t~L~~A~~  382 (748)
                      +.++++.++..++.+.++.++..+.+++.   .+..+.+|++.|+..++.+++++|++++. +++.++..|.||||+|+.
T Consensus        66 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~  142 (156)
T d1ihba_          66 GFAVIHDAARAGFLDTLQTLLEFQADVNI---EDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARL  142 (156)
T ss_dssp             SCCHHHHHHHHTCHHHHHHHHHTTCCTTC---CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             75322233222222222222112222223---564432112233332212222222212201122458999899999998


Q ss_pred             CCCHHHHHHHHHCC
Q ss_conf             59988999999849
Q 004504          383 YKQEECVKVLAKAG  396 (748)
Q Consensus       383 ~~~~~~v~~Ll~~g  396 (748)
                      .++.+++++|+++|
T Consensus       143 ~~~~~iv~~Ll~~G  156 (156)
T d1ihba_         143 YGRNEVVSLMQANG  156 (156)
T ss_dssp             TTCHHHHHHHHHTC
T ss_pred             CCCHHHHHHHHHCC
T ss_conf             39899999999667

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.4e-27  Score=168.23  Aligned_cols=87  Identities=29%  Similarity=0.425  Sum_probs=39.4

Q ss_pred             CCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Q ss_conf             74199999984999999999968999889866888988189999974999999999976999888899997388999975
Q 004504          304 GRTLLHHAILCGCTGAVAVLLSCGADAQCPIRTQKTEFHPIHLAARLGYSTIVQSLIDSGCDLNTKTESGETALMISAKY  383 (748)
Q Consensus       304 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~  383 (748)
                      |.++++.++..++.++++++++.|++++.   .+..+.||||+|+..|+.+++++|+ .|++++.++..|.||||+|+..
T Consensus        68 ~~~~l~~~~~~~~~~~~~~~l~~~~~~n~---~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~TpL~~A~~~  143 (156)
T d1bd8a_          68 GTSPVHDAARTGFLDTLKVLVEHGADVNV---PDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQR  143 (156)
T ss_dssp             SCCHHHHHHHTTCHHHHHHHHHTTCCSCC---CCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCCHHHHHHHS
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHC
T ss_conf             22222222222222222222222122112---3677872221222233222211112-2256646689999999999985


Q ss_pred             CCHHHHHHHHH
Q ss_conf             99889999998
Q 004504          384 KQEECVKVLAK  394 (748)
Q Consensus       384 ~~~~~v~~Ll~  394 (748)
                      |+.+++++|++
T Consensus       144 g~~~iv~~Ll~  154 (156)
T d1bd8a_         144 GAQDLVDILQG  154 (156)
T ss_dssp             CCHHHHHHHHT
T ss_pred             CCHHHHHHHHH
T ss_conf             98999999996

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=3.6e-26  Score=160.21  Aligned_cols=54  Identities=24%  Similarity=0.287  Sum_probs=25.0

Q ss_pred             CCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Q ss_conf             985399999964999999999969999999999999498999981998999999
Q 004504          543 GGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELL  596 (748)
Q Consensus       543 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~tpL~~A~~~~~~~~v~~L  596 (748)
                      .|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+|+.+++++|
T Consensus        99 ~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_          99 LKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             CCCHHHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHC
T ss_conf             673477766430222412311434467726689899999999985999999867

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=2.7e-25  Score=155.35  Aligned_cols=107  Identities=24%  Similarity=0.262  Sum_probs=93.8

Q ss_pred             CHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCC
Q ss_conf             53999999649999999999699999999999994989999819989999999599998999899985899998669997
Q 004504          545 FYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMK  624 (748)
Q Consensus       545 ~t~Lh~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~a~~~~~~~  624 (748)
                      .|||++|++.|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+++. 
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~-   81 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHV-   81 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCC-
T ss_pred             CHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHCCCH-
T ss_conf             7289999987799999999984201223222222222222222222222223343202331012332102233204732-


Q ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf             4147877999999999399986544689999885245
Q 004504          625 NDAELVILDEVARMLVLGGGHVLKHTKGGKGTPHRKD  661 (748)
Q Consensus       625 ~~~~~~~~~~~~~~L~~~ga~~~~~~~~g~t~~~~~~  661 (748)
                               +++++|+++|++++.+|..|+||+|++.
T Consensus        82 ---------~~v~~Ll~~Gad~~~~d~~G~t~l~~a~  109 (118)
T d1myoa_          82 ---------SCVKLLLSKGADKTVKGPDGLTALEATD  109 (118)
T ss_dssp             ---------HHHHHHHTTCCCSSSSSSSTCCCCCTCS
T ss_pred             ---------HHHHHHHCCCCCCEEECCCCCCHHHHHH
T ss_conf             ---------4324331020000003899999999986

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.91  E-value=2.2e-25  Score=155.79  Aligned_cols=107  Identities=34%  Similarity=0.475  Sum_probs=97.0

Q ss_pred             CHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCH
Q ss_conf             71999999819799999999879997667778983877999717906999999997552089889985399999964999
Q 004504          478 FSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDL  557 (748)
Q Consensus       478 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~  557 (748)
                      .|||++|++.|+.+++++|+++|++++..+..|+                                  ||||+|+..++.
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~----------------------------------t~lh~A~~~~~~   48 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGR----------------------------------KPLHYAADCGQL   48 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSC----------------------------------CTTHHHHHHSTT
T ss_pred             CHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCC----------------------------------CCCCCCCCCCCC
T ss_conf             7289999987799999999984201223222222----------------------------------222222222222


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf             9999999699999999999994989999819989999999599998999899985899998
Q 004504          558 DAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLAR  618 (748)
Q Consensus       558 ~~v~~Ll~~g~~~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~a~  618 (748)
                      +++++|+++|++++.+|..|.||||+|+.+|+.+++++|+++|+|++.+|..|.||||+|.
T Consensus        49 ~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~~~v~~Ll~~Gad~~~~d~~G~t~l~~a~  109 (118)
T d1myoa_          49 EILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATD  109 (118)
T ss_dssp             THHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCCHHHHHHHTTCCCSSSSSSSTCCCCCTCS
T ss_pred             CCCCCCCCCCCEEEECCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCEEECCCCCCHHHHHH
T ss_conf             2222233432023310123321022332047324324331020000003899999999986

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1e-24  Score=152.03  Aligned_cols=110  Identities=29%  Similarity=0.348  Sum_probs=61.2

Q ss_pred             CCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC
Q ss_conf             97199999981979999999987999766777898387799971790699999999755208988998539999996499
Q 004504          477 GFSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGD  556 (748)
Q Consensus       477 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~  556 (748)
                      +.++||.|+..|+.+++++|+++|++++.++..|.|                                  |+|.| ..|+
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t----------------------------------~l~~a-~~g~   47 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRR----------------------------------PIQVM-MMGS   47 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCC----------------------------------TTTSS-CTTC
T ss_pred             CHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCC----------------------------------CCCCC-CCCC
T ss_conf             705999999877999999999859741332221222----------------------------------22222-2222


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCC-CHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
Q ss_conf             9999999969999999999999-4989999819989999999599998999899985899998669
Q 004504          557 LDAVRLLTSRGYGVNVPDGDGY-TPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNS  621 (748)
Q Consensus       557 ~~~v~~Ll~~g~~~n~~d~~g~-tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~a~~~~  621 (748)
                      .+++++|+++|++++.++..|. ||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.++
T Consensus        48 ~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g  113 (125)
T d1bi7b_          48 ARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELG  113 (125)
T ss_dssp             HHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf             222221222222222222222222222222322222222221222223324578989999999868

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.91  E-value=3.2e-23  Score=143.71  Aligned_cols=128  Identities=21%  Similarity=0.222  Sum_probs=102.6

Q ss_pred             HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC---CC
Q ss_conf             999999819799999999879997667778983877999717906999999997552089889985399999964---99
Q 004504          480 AVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARR---GD  556 (748)
Q Consensus       480 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~---~~  556 (748)
                      .|..|++.+++..+..++..|+|++....                            ....+..|+||||+|++.   ++
T Consensus         9 ~L~~Av~~~dl~~l~~~~~~g~d~~~~~~----------------------------~~~~~~~g~t~Lh~A~~~~~~~~   60 (154)
T d1dcqa1           9 SLCEAVKTRDIFGLLQAYADGVDLTEKIP----------------------------LANGHEPDETALHLAVRSVDRTS   60 (154)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTSBCC----------------------------CSSCSSTTCBHHHHHHHHCCTTT
T ss_pred             HHHHHHHHCCHHHHHHHHHCCCCCCCCCC----------------------------CCCCCCCCCCHHHHHHHHCCCCC
T ss_conf             99999995889999999986998677777----------------------------54578999826999998328998


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf             99999999699999999999994989999819989999999599998999899985899998669997414787799999
Q 004504          557 LDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNARGETALSLARKNSSMKNDAELVILDEVA  636 (748)
Q Consensus       557 ~~~v~~Ll~~g~~~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~a~~~~~~~~~~~~~~~~~~~  636 (748)
                      .+++++|+++|+++|.+|..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..+..          +++
T Consensus        61 ~~iv~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~----------~i~  130 (154)
T d1dcqa1          61 LHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHE----------HCE  130 (154)
T ss_dssp             HHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH----------HHH
T ss_pred             HHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCH----------HHH
T ss_conf             9999999974997333131210100011112333322122135755024478999999999993999----------999


Q ss_pred             HHHHHCCCC
Q ss_conf             999939998
Q 004504          637 RMLVLGGGH  645 (748)
Q Consensus       637 ~~L~~~ga~  645 (748)
                      ++|++.++.
T Consensus       131 ~~L~~~~~~  139 (154)
T d1dcqa1         131 ELLTQALSG  139 (154)
T ss_dssp             HHHHHHHTT
T ss_pred             HHHHHHCCC
T ss_conf             999993889

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.2e-23  Score=146.12  Aligned_cols=122  Identities=25%  Similarity=0.381  Sum_probs=92.3

Q ss_pred             CHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCH
Q ss_conf             71999999819799999999879997667778983877999717906999999997552089889985399999964999
Q 004504          478 FSAVMVAASKGHVEVFRELVYAGADVKLLNKSGKTAIMLSELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDL  557 (748)
Q Consensus       478 ~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~a~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~  557 (748)
                      .++|+.|+..|+.+++++|+++|+|++.++..|+                                  ||||+|+..++.
T Consensus         2 l~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~----------------------------------t~Lh~A~~~~~~   47 (130)
T d1ycsb1           2 LALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGI----------------------------------TALHNAVCAGHT   47 (130)
T ss_dssp             HHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSC----------------------------------CHHHHHHHHTCH
T ss_pred             HHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC----------------------------------CCCCCCCCCCCC
T ss_conf             5999999993999999999986997561002111----------------------------------111222222222


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHCC-CCCCHHHHHHHHHH
Q ss_conf             999999969999999999999498999981998999999959999899989-9985899998669-99741478779999
Q 004504          558 DAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLISNGAVCDIKNA-RGETALSLARKNS-SMKNDAELVILDEV  635 (748)
Q Consensus       558 ~~v~~Ll~~g~~~n~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~-~g~t~L~~a~~~~-~~~~~~~~~~~~~~  635 (748)
                      +++++|++.|++++.+|.+|+||||+|+.+|+.+++++|+++||+++..+. .|+||++++.... ++.         ++
T Consensus        48 ~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~---------ei  118 (130)
T d1ycsb1          48 EIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYT---------QC  118 (130)
T ss_dssp             HHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCC---------CH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHH---------HH
T ss_conf             222222222222222123676422232102688999999986998664668999889999999986829---------99


Q ss_pred             HHHHHHC
Q ss_conf             9999939
Q 004504          636 ARMLVLG  642 (748)
Q Consensus       636 ~~~L~~~  642 (748)
                      +++|+..
T Consensus       119 v~~L~~~  125 (130)
T d1ycsb1         119 SQFLYGV  125 (130)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
T ss_conf             9999867

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=6.3e-24  Score=147.65  Aligned_cols=51  Identities=35%  Similarity=0.455  Sum_probs=20.6

Q ss_pred             HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
Q ss_conf             999999649999999999699999999999994989999819989999999
Q 004504          547 ALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLI  597 (748)
Q Consensus       547 ~Lh~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~tpL~~A~~~~~~~~v~~Ll  597 (748)
                      |||+|++.|+.+++++|+++|++++.+|..|.||||+|+.+|+.+++++|+
T Consensus        72 ~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Ll  122 (125)
T d1bi7b_          72 PVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR  122 (125)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHS
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
T ss_conf             222222322222222221222223324578989999999868799999999

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.89  E-value=3e-22  Score=138.25  Aligned_cols=121  Identities=21%  Similarity=0.229  Sum_probs=61.6

Q ss_pred             HHHHHHCCCHHHHHHHHHCCCCCCCC------CCCCCCHHHHHHHHC---CCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf             99999709999999998448988644------699997199999981---979999999987999766777898387799
Q 004504          447 LMFVAQAGDIAALKALIGREELNLDY------QDDNGFSAVMVAASK---GHVEVFRELVYAGADVKLLNKSGKTAIMLS  517 (748)
Q Consensus       447 L~~a~~~~~~~~v~~Ll~~~~~~~~~------~~~~g~t~L~~A~~~---g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~a  517 (748)
                      |..|++.+++..+..++..+ .+++.      .+..|.||||+|+..   ++.+++++|+++|++++.++..|       
T Consensus        10 L~~Av~~~dl~~l~~~~~~g-~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g-------   81 (154)
T d1dcqa1          10 LCEAVKTRDIFGLLQAYADG-VDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKG-------   81 (154)
T ss_dssp             HHHHHHTTCHHHHHHHHHTT-CCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTC-------
T ss_pred             HHHHHHHCCHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHH-------
T ss_conf             99999958899999999869-9867777754578999826999998328998999999997499733313121-------


Q ss_pred             HHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
Q ss_conf             97179069999999975520898899853999999649999999999699999999999994989999819989999999
Q 004504          518 ELNQNCDLFEKVMLEFALEKGNRNAGGFYALHCAARRGDLDAVRLLTSRGYGVNVPDGDGYTPLMLAAREGHGPMCELLI  597 (748)
Q Consensus       518 ~~~~~~~~~~~ll~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~tpL~~A~~~~~~~~v~~Ll  597 (748)
                                                 +||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+
T Consensus        82 ---------------------------~TpLh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~  134 (154)
T d1dcqa1          82 ---------------------------STALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLT  134 (154)
T ss_dssp             ---------------------------CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred             ---------------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
T ss_conf             ---------------------------01000111123333221221357550244789999999999939999999999


Q ss_pred             HCCCC
Q ss_conf             59999
Q 004504          598 SNGAV  602 (748)
Q Consensus       598 ~~ga~  602 (748)
                      +.++.
T Consensus       135 ~~~~~  139 (154)
T d1dcqa1         135 QALSG  139 (154)
T ss_dssp             HHHTT
T ss_pred             HHCCC
T ss_conf             93889

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=3.3e-23  Score=143.58  Aligned_cols=57  Identities=25%  Similarity=0.377  Sum_probs=20.3

Q ss_pred             HHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCC
Q ss_conf             9999970999999999844898864469999719999998197999999998799976
Q 004504          447 LMFVAQAGDIAALKALIGREELNLDYQDDNGFSAVMVAASKGHVEVFRELVYAGADVK  504 (748)
Q Consensus       447 L~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~  504 (748)
                      |+.|+..|+.+++++|++++ ++++.++.+|.||||+|+..++.+++++|++.|++++
T Consensus         5 L~~A~~~G~~~~v~~Ll~~g-~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~   61 (130)
T d1ycsb1           5 LLDSSLEGEFDLVQRIIYEV-DDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVN   61 (130)
T ss_dssp             HHHHHHHTCHHHHHHHTSTT-SSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTT
T ss_pred             HHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             99999939999999999869-9756100211111122222222222222222222222

>d1maia_ b.55.1.1 (A:) Phospholipase C delta-1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: PH domain-like barrel
superfamily: PH domain-like
family: Pleckstrin-homology domain (PH domain)
domain: Phospholipase C delta-1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=83.08  E-value=0.65  Score=18.39  Aligned_cols=53  Identities=23%  Similarity=0.500  Sum_probs=33.3

Q ss_pred             CCCCCC-HHHHHHHCCCCCCCCCCEEEEEEE-CCCEEEEEECCCHHHHHHHHHHHHHHH
Q ss_conf             346999-789853237999999925899963-085599986571366888755588888
Q 004504          686 AKLGPS-PAFQKNRRGKGDVNEPGVFHIVTT-KNNEVHFVCQGGLEMAELWVRGIMLVT  742 (748)
Q Consensus       686 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  742 (748)
                      ...|.. +.+++...   ......-|.++.. ..+.++|+|+...|. ..||+||+.+.
T Consensus        64 V~~G~~s~~~~~~~~---~~~~~~~FsIv~~~~~r~l~l~a~s~~~~-~~Wv~~L~~L~  118 (119)
T d1maia_          64 VRMGHRTEGLEKFAR---DIPEDRCFSIVFKDQRNTLDLIAPSPADA-QHWVQGLRKII  118 (119)
T ss_dssp             EEESSCSHHHHHHCT---TSCGGGEEEEEESSSCCCEEEECSSHHHH-HHHHHHHHHHH
T ss_pred             EECCCCCCHHHHCCC---CCCCCCEEEEEECCCCCEEEEEECCHHHH-HHHHHHHHHHH
T ss_conf             876888801320356---78857269999958983799998999999-99999999984