Citrus Sinensis ID: 004530
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 746 | 2.2.26 [Sep-21-2011] | |||||||
| Q922S8 | 721 | Kinesin-like protein KIF2 | yes | no | 0.426 | 0.441 | 0.541 | 1e-101 | |
| Q99661 | 725 | Kinesin-like protein KIF2 | yes | no | 0.426 | 0.438 | 0.538 | 1e-101 | |
| Q95LP1 | 671 | Kinesin-like protein KIF2 | N/A | no | 0.426 | 0.473 | 0.538 | 1e-101 | |
| Q6S004 | 1030 | Kinesin-related protein 6 | yes | no | 0.435 | 0.315 | 0.568 | 1e-100 | |
| P70096 | 718 | Kinesin-like protein KIF2 | yes | no | 0.426 | 0.442 | 0.535 | 1e-100 | |
| Q62909 | 671 | Kinesin-like protein KIF2 | yes | no | 0.426 | 0.473 | 0.530 | 2e-98 | |
| Q5ZKV8 | 706 | Kinesin-like protein KIF2 | no | no | 0.426 | 0.450 | 0.530 | 2e-97 | |
| Q5T7B8 | 1368 | Kinesin-like protein KIF2 | no | no | 0.443 | 0.241 | 0.537 | 2e-97 | |
| Q91637 | 682 | Kinesin-like protein KIF2 | N/A | no | 0.428 | 0.469 | 0.529 | 3e-97 | |
| O00139 | 706 | Kinesin-like protein KIF2 | no | no | 0.426 | 0.450 | 0.527 | 4e-97 |
| >sp|Q922S8|KIF2C_MOUSE Kinesin-like protein KIF2C OS=Mus musculus GN=Kif2c PE=1 SV=1 | Back alignment and function desciption |
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Score = 370 bits (950), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/349 (54%), Positives = 243/349 (69%), Gaps = 31/349 (8%)
Query: 205 KIRVVVRKRPLNKKELSRKEEDIVTV-SDNALTVHEPKLKVDLTAYVEKHEFCFDAVLDE 263
+I V VRKRPLNK+EL++KE D+++V S L VHEPKLKVDLT Y+E FCFD DE
Sbjct: 254 RICVCVRKRPLNKQELAKKEIDVISVPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDE 313
Query: 264 RVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTGSGKTFTM------------QPLPLRA 311
+N+ VYR T P++ TIF+ KATCFAYGQTGSGKT TM + + A
Sbjct: 314 TASNEVVYRFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMA 373
Query: 312 AEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGERKKLCMREDGRQQVCIVGLQEF 371
+ D+ L +QP YRN ++++++FEIY GK+FDLL ++ KL + ED RQQV +VGLQE+
Sbjct: 374 SRDVFLLKNQPRYRNLNLEVYVTFFEIYNGKVFDLLNKKAKLRVLEDSRQQVQVVGLQEY 433
Query: 372 EVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIEVKESFRRNNDGNES 431
V+ V + I G+A R++G T AN SSRSHA Q+ ++ +
Sbjct: 434 LVTCADDVIKMINMGSACRTSGQTFANSNSSRSHACFQILLR-----------------T 476
Query: 432 RGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFR 491
+G++ GK S +DLAG+ERGADT+ DRQTR+EGAEINKSLLALKECIRAL ++ H PFR
Sbjct: 477 KGRLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFR 536
Query: 492 GSKLTEVLRDSFVG-NSKTVMISCISPNVGSCEHTLNTLRYADRVKSLS 539
SKLT+VLRDSF+G NS+T MI+ ISP + SCE+TLNTLRYADRVK LS
Sbjct: 537 ESKLTQVLRDSFIGENSRTCMIAMISPGISSCEYTLNTLRYADRVKELS 585
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Promotes ATP-dependent removal of tubulin dimers from microtubules. Regulates the turnover of microtubules at the kinetochore and functions in chromosome segregation during mitosis. Mus musculus (taxid: 10090) |
| >sp|Q99661|KIF2C_HUMAN Kinesin-like protein KIF2C OS=Homo sapiens GN=KIF2C PE=1 SV=2 | Back alignment and function description |
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| >sp|Q95LP1|KIF2C_MACFA Kinesin-like protein KIF2C OS=Macaca fascicularis GN=KIF2C PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6S004|KIF6_DICDI Kinesin-related protein 6 OS=Dictyostelium discoideum GN=kif6 PE=2 SV=1 | Back alignment and function description |
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| >sp|P70096|KIF2C_CRIGR Kinesin-like protein KIF2C OS=Cricetulus griseus GN=KIF2C PE=1 SV=2 | Back alignment and function description |
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| >sp|Q62909|KIF2C_RAT Kinesin-like protein KIF2C OS=Rattus norvegicus GN=Kif2c PE=2 SV=3 | Back alignment and function description |
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| >sp|Q5ZKV8|KIF2A_CHICK Kinesin-like protein KIF2A OS=Gallus gallus GN=KIF2A PE=2 SV=2 | Back alignment and function description |
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| >sp|Q5T7B8|KIF24_HUMAN Kinesin-like protein KIF24 OS=Homo sapiens GN=KIF24 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q91637|KIF2A_XENLA Kinesin-like protein KIF2A OS=Xenopus laevis GN=kif2a PE=1 SV=2 | Back alignment and function description |
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| >sp|O00139|KIF2A_HUMAN Kinesin-like protein KIF2A OS=Homo sapiens GN=KIF2A PE=1 SV=3 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 746 | ||||||
| 224107125 | 814 | predicted protein [Populus trichocarpa] | 0.973 | 0.891 | 0.814 | 0.0 | |
| 225432256 | 815 | PREDICTED: uncharacterized protein LOC10 | 0.975 | 0.893 | 0.817 | 0.0 | |
| 255551765 | 823 | kif4, putative [Ricinus communis] gi|223 | 0.978 | 0.886 | 0.804 | 0.0 | |
| 147820957 | 989 | hypothetical protein VITISV_000297 [Viti | 0.975 | 0.736 | 0.728 | 0.0 | |
| 33439496 | 909 | central motor kinesin 1 [Gossypium hirsu | 0.975 | 0.800 | 0.788 | 0.0 | |
| 356521851 | 814 | PREDICTED: uncharacterized protein LOC10 | 0.971 | 0.890 | 0.774 | 0.0 | |
| 356564131 | 815 | PREDICTED: uncharacterized protein LOC10 | 0.973 | 0.890 | 0.771 | 0.0 | |
| 449460959 | 805 | PREDICTED: uncharacterized protein LOC10 | 0.965 | 0.894 | 0.753 | 0.0 | |
| 449527719 | 805 | PREDICTED: LOW QUALITY PROTEIN: uncharac | 0.965 | 0.894 | 0.748 | 0.0 | |
| 357478791 | 813 | Kinesin-like protein KIF2A [Medicago tru | 0.966 | 0.886 | 0.758 | 0.0 |
| >gi|224107125|ref|XP_002314383.1| predicted protein [Populus trichocarpa] gi|222863423|gb|EEF00554.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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Score = 1223 bits (3164), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 603/740 (81%), Positives = 661/740 (89%), Gaps = 14/740 (1%)
Query: 1 MGGQMQQSNAAAAAAALYDHP--GGSMHNNAGPTTDAGDAVMARWLQSAGLQHLASPLAS 58
MGG+MQQ+NA+AA+ ALYDH GGS+ GP+ DAGDAV ARWLQSAGLQHLASPLAS
Sbjct: 1 MGGKMQQTNASAASTALYDHAAAGGSL----GPSADAGDAVTARWLQSAGLQHLASPLAS 56
Query: 59 NGIDHRLLPNLLMQGYGAQSAEEKQRLFKLMRNLNFNGESGAEPHTPTAQTS-GVVASDG 117
GIDHRLLP++LMQGYGAQSAEEKQRLFKLMRNLNFNGE+ +EP+ P+AQTS GV ASDG
Sbjct: 57 TGIDHRLLPHILMQGYGAQSAEEKQRLFKLMRNLNFNGEAVSEPYIPSAQTSTGVSASDG 116
Query: 118 LYSPEFRGDFGAGLLDLHAMDDTELLSEHMISEPFEPSPYIPSISKGFENDFNLTAGWQQ 177
YSP+FRGDFGAGLLDLHAMDDTELLSEH ISEPF+PSP +P +SKGFENDFNLT+ QQ
Sbjct: 117 FYSPDFRGDFGAGLLDLHAMDDTELLSEHAISEPFDPSPLMPGVSKGFENDFNLTSSRQQ 176
Query: 178 KEQTDADASAPVPTNEKESNARENNVAKIRVVVRKRPLNKKELSRKEEDIVTVSDNALTV 237
+EQTDAD S P PTNEKE++ +ENNVAKI+VVVRKRPLNKKEL+RKE+DIVTV DNAL V
Sbjct: 177 REQTDADLSVPFPTNEKENSTKENNVAKIKVVVRKRPLNKKELARKEDDIVTVYDNALAV 236
Query: 238 HEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTG 297
HEP+LKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTG
Sbjct: 237 HEPRLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTG 296
Query: 298 SGKTFTMQPLPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGERKKLCMRE 357
SGKTFTMQPLPLRAAEDLVRLLHQPVYRNQRFKLWLS+FEIYGGKLFDLL ERKKLCMRE
Sbjct: 297 SGKTFTMQPLPLRAAEDLVRLLHQPVYRNQRFKLWLSFFEIYGGKLFDLLSERKKLCMRE 356
Query: 358 DGRQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIE 417
DGRQQVCIVGLQEFEVSDVQIVKE+IEKGNAARSTGSTGANEESSRSHAILQL +KKH E
Sbjct: 357 DGRQQVCIVGLQEFEVSDVQIVKEFIEKGNAARSTGSTGANEESSRSHAILQLVVKKHSE 416
Query: 418 VKESFRRNNDGNESR-GKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKE 476
VK+S RRNND N+ R GKV+GKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKE
Sbjct: 417 VKDS-RRNNDVNDYRSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKE 475
Query: 477 CIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNVGSCEHTLNTLRYADRVK 536
CIRALDNDQIHIPFRGSKLTEVLRDSFVGNS+TVM+SCISPN GSCEHTLNTLRYADRVK
Sbjct: 476 CIRALDNDQIHIPFRGSKLTEVLRDSFVGNSRTVMVSCISPNAGSCEHTLNTLRYADRVK 535
Query: 537 SLSKSGNTKKDQGQNSLIPINKDTSSASSIPVSADVEDVYEPQQDVKVVDTGRRVTEKET 596
SLSKSGN +KDQ +SL P NKD SS SS+PVS DV+DVYE QQ+V+V D GRRV EKET
Sbjct: 536 SLSKSGNARKDQAVSSLPPTNKDASSTSSLPVSVDVDDVYE-QQEVRVPDMGRRVVEKET 594
Query: 597 LSYIPTVDYDKQQSSFSSGFS--GREESGVASGSMDRERFEINNAYGGSTSQKMRPSYSQ 654
SY PTVDYDKQ SSF SGFS REE+G++SG DRERFE N++YGG SQK+ SY+Q
Sbjct: 595 PSYNPTVDYDKQPSSFPSGFSLNEREENGLSSGIADRERFESNSSYGGLASQKVNSSYTQ 654
Query: 655 NSLDTEEKVQKVSPPRRKGSRDTEKSEKLGSWLKKDSNGSEPPTTNSRQQSTSNYNINNV 714
+S DTEEKV KVSPPRRK SR+ EKSEK G+WLKKD +GS+ PT + Q+T NY+ +N
Sbjct: 655 HSADTEEKVPKVSPPRRKISRE-EKSEKFGNWLKKDGSGSDLPTAIPKLQNTGNYSASNT 713
Query: 715 GSKQPQPQPPSDGNINALLE 734
GS+Q +P PP GNINA+LE
Sbjct: 714 GSRQYKPDPPV-GNINAILE 732
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225432256|ref|XP_002271765.1| PREDICTED: uncharacterized protein LOC100240940 [Vitis vinifera] gi|297736848|emb|CBI26049.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|255551765|ref|XP_002516928.1| kif4, putative [Ricinus communis] gi|223544016|gb|EEF45542.1| kif4, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|147820957|emb|CAN74575.1| hypothetical protein VITISV_000297 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|33439496|gb|AAQ18797.1| central motor kinesin 1 [Gossypium hirsutum] | Back alignment and taxonomy information |
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| >gi|356521851|ref|XP_003529564.1| PREDICTED: uncharacterized protein LOC100778915 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356564131|ref|XP_003550310.1| PREDICTED: uncharacterized protein LOC100798612 [Glycine max] | Back alignment and taxonomy information |
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| >gi|449460959|ref|XP_004148211.1| PREDICTED: uncharacterized protein LOC101210544 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449527719|ref|XP_004170857.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101210544 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|357478791|ref|XP_003609681.1| Kinesin-like protein KIF2A [Medicago truncatula] gi|355510736|gb|AES91878.1| Kinesin-like protein KIF2A [Medicago truncatula] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 746 | ||||||
| TAIR|locus:2089358 | 794 | KINESIN-13A [Arabidopsis thali | 0.949 | 0.891 | 0.700 | 9e-267 | |
| TAIR|locus:2093382 | 684 | AT3G16060 [Arabidopsis thalian | 0.491 | 0.536 | 0.714 | 2.1e-149 | |
| DICTYBASE|DDB_G0267404 | 1030 | kif6 "kinesin family member 6" | 0.438 | 0.317 | 0.563 | 4.8e-102 | |
| UNIPROTKB|F1S346 | 725 | KIF2C "Uncharacterized protein | 0.453 | 0.466 | 0.525 | 2.4e-91 | |
| MGI|MGI:1921054 | 721 | Kif2c "kinesin family member 2 | 0.471 | 0.488 | 0.501 | 3.8e-91 | |
| UNIPROTKB|F1SEA9 | 1297 | KIF24 "Uncharacterized protein | 0.5 | 0.287 | 0.503 | 5e-89 | |
| UNIPROTKB|F1SEB0 | 1304 | KIF24 "Uncharacterized protein | 0.5 | 0.286 | 0.503 | 5.6e-89 | |
| UNIPROTKB|E2RC91 | 1365 | KIF24 "Uncharacterized protein | 0.443 | 0.242 | 0.549 | 8.1e-89 | |
| UNIPROTKB|Q91636 | 730 | kif2c "Kinesin-like protein KI | 0.441 | 0.450 | 0.518 | 2.9e-88 | |
| UNIPROTKB|P70096 | 718 | KIF2C "Kinesin-like protein KI | 0.479 | 0.498 | 0.493 | 3.2e-88 |
| TAIR|locus:2089358 KINESIN-13A [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 2566 (908.3 bits), Expect = 9.0e-267, P = 9.0e-267
Identities = 517/738 (70%), Positives = 601/738 (81%)
Query: 1 MGGQMQQSNXXXXXXXLYDHPGGSMHNNAGPTTDAGDAVMARWLQSAGLQHLASPLASNG 60
MGGQMQQ+N LYD G++ PT DAGDAVMARWLQSAGLQHLASP+AS G
Sbjct: 1 MGGQMQQNNAAAATA-LYD---GAL-----PTNDAGDAVMARWLQSAGLQHLASPVASTG 51
Query: 61 IDHRLLPNLLMQGYGAQSAEEKQRLFKLMRNLNFNGESGAEPHTPTAQTSGVV-ASDGLY 119
D R LPNLLMQGYGAQ+AEEKQRLF+LMRNLNFNGES +E +TPTA TS + +S+G +
Sbjct: 52 NDQRHLPNLLMQGYGAQTAEEKQRLFQLMRNLNFNGESTSESYTPTAHTSAAMPSSEGFF 111
Query: 120 SPEFRGDFGAGLLDLHAMDDTELLSEHMISEPFEPSPYIPSISKGFENDFNLTAGWQQKE 179
SPEFRGDFGAGLLDLHAMDDTELLSEH+I+EPFEPSP++PS++K FE D+NL A QQ++
Sbjct: 112 SPEFRGDFGAGLLDLHAMDDTELLSEHVITEPFEPSPFMPSVNKEFEEDYNLAANRQQRQ 171
Query: 180 QTDADASAPVPTNEKESNARENNVAKIRVVVRKRPLNKKELSRKEEDIVTVSDNALTVHE 239
QT+A+ +P ++KE+N+ VAKI+VVVRKRPLNKKE ++KEED+VTVSDN+LTVHE
Sbjct: 172 QTEAEPLGLLPKSDKENNS----VAKIKVVVRKRPLNKKETAKKEEDVVTVSDNSLTVHE 227
Query: 240 PKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTGSG 299
P++KVDLTAYVEKHEFCFDAVLDE V+NDEVYR T+EPIIP IFQRTKATCFAYGQTGSG
Sbjct: 228 PRVKVDLTAYVEKHEFCFDAVLDEDVSNDEVYRATIEPIIPIIFQRTKATCFAYGQTGSG 287
Query: 300 KTFTMQPLPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGERKKLCMREDG 359
KTFTM+PLP+RA EDL+RLL QPVY NQRFKLWLSYFEIYGGKLFDLL ERKKLCMREDG
Sbjct: 288 KTFTMKPLPIRAVEDLMRLLRQPVYSNQRFKLWLSYFEIYGGKLFDLLSERKKLCMREDG 347
Query: 360 RQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIEVK 419
RQQVCIVGLQE+EVSDVQIVK++IEKGNA RSTGSTGANEESSRSHAILQL +KKH+EVK
Sbjct: 348 RQQVCIVGLQEYEVSDVQIVKDFIEKGNAERSTGSTGANEESSRSHAILQLVVKKHVEVK 407
Query: 420 ESFRRNNDGNESRGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIR 479
++ RRNND NE GKV+GKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIR
Sbjct: 408 DTRRRNNDSNELPGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIR 467
Query: 480 ALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNVGSCEHTLNTLRYADRVKSLS 539
ALDNDQ+HIPFRGSKLTEVLRDSFVGNS+TVMISCISPN GSCEHTLNTLRYADRVKSLS
Sbjct: 468 ALDNDQLHIPFRGSKLTEVLRDSFVGNSRTVMISCISPNAGSCEHTLNTLRYADRVKSLS 527
Query: 540 KSGNTKKDQGQNSLIPINKDTSSASSIPVSADVEDVYEPQQDVKVVDTGRRVTEKETLSY 599
KSGN+KKDQ NS+ P+NKD + DVEDV+EP Q+V V +T RRV EK++ S
Sbjct: 528 KSGNSKKDQTANSMPPVNKDPLLGPN-----DVEDVFEPPQEVNVPETRRRVVEKDSNSS 582
Query: 600 IPTVDYDKQQXXXXXXXXXXXXXXVASGSMDRERFEINNAYGGSTSQKMR-PSYSQNSLD 658
+D+ +Q + S SMD+ R E N+++ GSTSQ+ SY Q + D
Sbjct: 583 TSGIDF-RQPTNYREESG------IPSFSMDKGRSEPNSSFAGSTSQRNNISSYPQETSD 635
Query: 659 TEEKVQKVSPPRRKGSRDTEKSEKLGSWLKKDSNGSEPPT-TNSRQQSTSNYNIN-NVGS 716
EEKV+KVSPPR KG R+ EK ++ +W K+D + S+ PT TN RQ ++ + S
Sbjct: 636 REEKVKKVSPPRGKGLRE-EKPDRPQNWSKRDVSSSDIPTLTNFRQNASETASRQYETAS 694
Query: 717 KQPQPQPPSDGNINALLE 734
+Q + P D N++ALLE
Sbjct: 695 RQYETDPSLDENLDALLE 712
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| TAIR|locus:2093382 AT3G16060 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0267404 kif6 "kinesin family member 6" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1S346 KIF2C "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| MGI|MGI:1921054 Kif2c "kinesin family member 2C" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1SEA9 KIF24 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|F1SEB0 KIF24 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| UNIPROTKB|E2RC91 KIF24 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
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| UNIPROTKB|Q91636 kif2c "Kinesin-like protein KIF2C" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
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| UNIPROTKB|P70096 KIF2C "Kinesin-like protein KIF2C" [Cricetulus griseus (taxid:10029)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | estExt_fgenesh4_pm.C_LG_X0062 | hypothetical protein (814 aa) | ||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 746 | |||
| cd01367 | 322 | cd01367, KISc_KIF2_like, Kinesin motor domain, KIF | 0.0 | |
| pfam00225 | 326 | pfam00225, Kinesin, Kinesin motor domain | 1e-126 | |
| cd00106 | 328 | cd00106, KISc, Kinesin motor domain | 1e-114 | |
| smart00129 | 335 | smart00129, KISc, Kinesin motor, catalytic domain | 1e-110 | |
| cd01370 | 338 | cd01370, KISc_KIP3_like, Kinesin motor domain, KIP | 1e-91 | |
| cd01372 | 341 | cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik | 4e-76 | |
| cd01366 | 329 | cd01366, KISc_C_terminal, Kinesin motor domain, KI | 4e-76 | |
| cd01374 | 321 | cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E | 6e-76 | |
| cd01365 | 356 | cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K | 1e-70 | |
| cd01371 | 333 | cd01371, KISc_KIF3, Kinesin motor domain, kinesins | 5e-70 | |
| cd01369 | 325 | cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine | 6e-68 | |
| cd01364 | 352 | cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC | 2e-61 | |
| cd01376 | 319 | cd01376, KISc_KID_like, Kinesin motor domain, KIF2 | 2e-59 | |
| COG5059 | 568 | COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | 7e-57 | |
| cd01368 | 345 | cd01368, KISc_KIF23_like, Kinesin motor domain, KI | 3e-55 | |
| cd01375 | 334 | cd01375, KISc_KIF9_like, Kinesin motor domain, KIF | 4e-50 | |
| cd01373 | 337 | cd01373, KISc_KLP2_like, Kinesin motor domain, KLP | 9e-48 | |
| PLN03188 | 1320 | PLN03188, PLN03188, kinesin-12 family protein; Pro | 3e-36 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 3e-28 | |
| cd09541 | 60 | cd09541, SAM_KIF24-like, SAM domain of KIF24-like | 1e-17 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 0.002 |
| >gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
Score = 526 bits (1356), Expect = 0.0
Identities = 211/339 (62%), Positives = 253/339 (74%), Gaps = 25/339 (7%)
Query: 205 KIRVVVRKRPLNKKELSRKEEDIVTV-SDNALTVHEPKLKVDLTAYVEKHEFCFDAVLDE 263
KI V VRKRPLN KELS+ E D+V+ S+ +TVHEPK KVDLT Y+EKH F FD V DE
Sbjct: 2 KITVAVRKRPLNDKELSKGETDVVSCESNPTVTVHEPKTKVDLTKYIEKHTFRFDYVFDE 61
Query: 264 RVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTGSGKTFTMQ------PLPLRAAEDLVR 317
VTN+EVYR TV+P+IP +F+ ATCFAYGQTGSGKT+TM L AA D+ R
Sbjct: 62 AVTNEEVYRSTVKPLIPHVFEGGVATCFAYGQTGSGKTYTMLGDENQEGLYALAARDIFR 121
Query: 318 LLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGERKKLCMREDGRQQVCIVGLQEFEVSDVQ 377
LL QP N + +S+FEIYGGKLFDLL +RK+L + EDG+ V IVGL E V+ V
Sbjct: 122 LLAQP---NDDLGVTVSFFEIYGGKLFDLLNDRKRLSVLEDGKGNVQIVGLTEKPVTSVD 178
Query: 378 IVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIEVKESFRRNNDGNESRGKVIG 437
+ E IE GN+ R+TGSTGAN++SSRSHAILQ+ +K K++G
Sbjct: 179 ELLELIESGNSLRTTGSTGANDQSSRSHAILQIILKNKKL---------------NKLLG 223
Query: 438 KISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTE 497
K+SFIDLAGSERGADT+++DRQTR EGAEINKSLLALKECIRAL +++ H+PFRGSKLT+
Sbjct: 224 KLSFIDLAGSERGADTSEHDRQTRKEGAEINKSLLALKECIRALASNKAHVPFRGSKLTQ 283
Query: 498 VLRDSFVGNSKTVMISCISPNVGSCEHTLNTLRYADRVK 536
VLRDSF+GNSKTVMI+ ISP+ SCEHTLNTLRYADRVK
Sbjct: 284 VLRDSFIGNSKTVMIATISPSASSCEHTLNTLRYADRVK 322
|
KIF2 is a protein expressed in neurons, which has been associated with axonal transport and neuron development; alternative splice forms have been implicated in lysosomal translocation. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found in the middle (M-type) of the protein chain. M-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second (KIF2 may be slower). To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 322 |
| >gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238054 cd00106, KISc, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|188940 cd09541, SAM_KIF24-like, SAM domain of KIF24-like subfamily | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 746 | |||
| KOG0246 | 676 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG4280 | 574 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0245 | 1221 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01370 | 338 | KISc_KIP3_like Kinesin motor domain, KIP3-like sub | 100.0 | |
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01367 | 322 | KISc_KIF2_like Kinesin motor domain, KIF2-like gro | 100.0 | |
| cd01373 | 337 | KISc_KLP2_like Kinesin motor domain, KLP2-like sub | 100.0 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 100.0 | |
| cd01368 | 345 | KISc_KIF23_like Kinesin motor domain, KIF23-like s | 100.0 | |
| cd01365 | 356 | KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p | 100.0 | |
| KOG0240 | 607 | consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | 100.0 | |
| KOG0242 | 675 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01371 | 333 | KISc_KIF3 Kinesin motor domain, kinesins II or KIF | 100.0 | |
| cd01374 | 321 | KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like | 100.0 | |
| cd01364 | 352 | KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind | 100.0 | |
| cd01369 | 325 | KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy | 100.0 | |
| cd01376 | 319 | KISc_KID_like Kinesin motor domain, KIF22/Kid-like | 100.0 | |
| cd01372 | 341 | KISc_KIF4 Kinesin motor domain, KIF4-like subfamil | 100.0 | |
| cd01375 | 334 | KISc_KIF9_like Kinesin motor domain, KIF9-like sub | 100.0 | |
| KOG0241 | 1714 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01366 | 329 | KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ | 100.0 | |
| KOG0239 | 670 | consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | 100.0 | |
| cd00106 | 328 | KISc Kinesin motor domain. This catalytic (head) d | 100.0 | |
| smart00129 | 335 | KISc Kinesin motor, catalytic domain. ATPase. Micr | 100.0 | |
| PF00225 | 335 | Kinesin: Kinesin motor domain; InterPro: IPR001752 | 100.0 | |
| KOG0247 | 809 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0244 | 913 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 100.0 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 97.8 | |
| PF07647 | 66 | SAM_2: SAM domain (Sterile alpha motif); InterPro: | 96.21 | |
| cd00166 | 63 | SAM Sterile alpha motif.; Widespread domain in sig | 94.35 | |
| COG0556 | 663 | UvrB Helicase subunit of the DNA excision repair c | 93.67 | |
| smart00454 | 68 | SAM Sterile alpha motif. Widespread domain in sign | 93.1 | |
| PF00536 | 64 | SAM_1: SAM domain (Sterile alpha motif); InterPro: | 92.1 | |
| PF00308 | 219 | Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 | 91.04 | |
| PRK06893 | 229 | DNA replication initiation factor; Validated | 88.63 | |
| COG2805 | 353 | PilT Tfp pilus assembly protein, pilus retraction | 88.5 | |
| PRK06526 | 254 | transposase; Provisional | 86.57 | |
| PRK12377 | 248 | putative replication protein; Provisional | 86.43 | |
| PRK08116 | 268 | hypothetical protein; Validated | 85.12 | |
| PRK14086 | 617 | dnaA chromosomal replication initiation protein; P | 84.43 | |
| PRK06620 | 214 | hypothetical protein; Validated | 82.27 | |
| PRK07952 | 244 | DNA replication protein DnaC; Validated | 81.88 | |
| PRK08084 | 235 | DNA replication initiation factor; Provisional | 81.73 | |
| PRK14088 | 440 | dnaA chromosomal replication initiation protein; P | 81.58 | |
| COG2804 | 500 | PulE Type II secretory pathway, ATPase PulE/Tfp pi | 81.15 | |
| COG1474 | 366 | CDC6 Cdc6-related protein, AAA superfamily ATPase | 80.7 | |
| cd00009 | 151 | AAA The AAA+ (ATPases Associated with a wide varie | 80.64 | |
| TIGR02928 | 365 | orc1/cdc6 family replication initiation protein. M | 80.53 | |
| TIGR00362 | 405 | DnaA chromosomal replication initiator protein Dna | 80.48 | |
| PF04851 | 184 | ResIII: Type III restriction enzyme, res subunit; | 80.36 |
| >KOG0246 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-96 Score=802.11 Aligned_cols=506 Identities=48% Similarity=0.709 Sum_probs=437.2
Q ss_pred CCcccccccHHHHHHHhhcCCCCCCCCCCCCCCCcchHHHHHHHHHhCccccccccccCCCccc--------ccchhhhc
Q 004530 1 MGGQMQQSNAAAAAAALYDHPGGSMHNNAGPTTDAGDAVMARWLQSAGLQHLASPLASNGIDHR--------LLPNLLMQ 72 (746)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 72 (746)
||++|++.++ ++...||+. +-+..| |+.||+.|++.++.+|...+|+....... -+|+|.++
T Consensus 4 ~g~~~~i~rs-dgrih~a~v--------~~~~~d-~~~vtveW~E~~~~kgKe~~le~i~~lnp~l~~~~~~~~~~lp~~ 73 (676)
T KOG0246|consen 4 VGQHVKIKRS-DGRIHLAVV--------AEVNKD-GKCVTVEWVEKGETKGKELDLEEILLLNPELYSDLEHPIPNLPLK 73 (676)
T ss_pred ccceeEEecc-cCceeeeeE--------EEeccC-CcEEEEEhhhccccccccCCHHHHhhcChhhcccccCCCCCcccc
Confidence 6888888776 344667776 347788 99999999999999999999988765543 45666666
Q ss_pred cccccchHHHHHHHHHHHhhccCCCC-CCCCCCCCCcc---c--cccccCCCCC-CCccCCcCcc-cccccccCcccccc
Q 004530 73 GYGAQSAEEKQRLFKLMRNLNFNGES-GAEPHTPTAQT---S--GVVASDGLYS-PEFRGDFGAG-LLDLHAMDDTELLS 144 (746)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~--~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~d~~~~~ 144 (746)
|++++++.| +.|.+.++|+...+. .+-..+|+... . -+++..+|.. |.++|.|+++ ..+.|+|.+.|.+.
T Consensus 74 -~~~~~a~~~-~~~~~n~~i~~~~~~~~~rs~~~tg~~~~~~~~~~P~~~~~~~~p~~~~~~~a~~~rks~~v~e~e~l~ 151 (676)
T KOG0246|consen 74 -RPASTAINR-KGIEANRTIYESIEMIPQRSQRATGSSCKRLETALPSQRIFPPQPKSTGTAAAASARKSHAVKEVEKLQ 151 (676)
T ss_pred -ccccchhhh-hhhhhhhhcccccccchhhcccccccccccccccCCcccCCCCCCcccccchhhhhhhcccccchHHHH
Confidence 777777766 889999999855543 12222454443 1 3677777877 9999999998 89999999999998
Q ss_pred ccccCCCCCCCCCCCCcCCCCCcccccchhhhh-------hhccCCCCCCCCCCCccccccccCCCCCeEEEEEeCCCCc
Q 004530 145 EHMISEPFEPSPYIPSISKGFENDFNLTAGWQQ-------KEQTDADASAPVPTNEKESNARENNVAKIRVVVRKRPLNK 217 (746)
Q Consensus 145 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~IrV~VRVRPl~~ 217 (746)
|..... ++++|.+++..+..-+-.+...+|.- ++..+. .|. +........+|.||||.||+++
T Consensus 152 e~re~~-r~~~~~~r~~r~~~~~~d~~npn~e~~~mi~~~r~~L~~---~pl------s~~~~v~ehrI~VCVRKRPLnk 221 (676)
T KOG0246|consen 152 EQREKR-REPSPRMRSRRKSAQDVDPSNPNWEFAQMIREYREQLDS---SPL------SMGDGVNEHRICVCVRKRPLNK 221 (676)
T ss_pred HHHHHh-hccCccccccchhhcccCCCCCchHHHHHHHHHhhhhcc---ccc------ccCCCCccceEEEEeecCCCCc
Confidence 876654 88899988776444344444444421 111111 111 1123445689999999999999
Q ss_pred hhhccCCCcEEEE-eCCeEEEeCCCccccccccccceEEEeeeeeCCCCChHHHHHhhhhhhHHHhhcCCCcceeecccC
Q 004530 218 KELSRKEEDIVTV-SDNALTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQT 296 (746)
Q Consensus 218 ~E~~~~~~~iv~v-~~~~vtv~~p~~~~~~~~~~~~~~F~FD~VFd~~asQ~eVy~~~v~pLV~~vl~G~N~tIfAYGQT 296 (746)
+|....+.++|++ +++.+++|+|+.++++++|.+++.|+||++||+.++++.||.-+++|||..+|+|.-+||||||||
T Consensus 222 kE~~~keiDvisvps~~~l~vHEpk~kVDLtkYlEn~~F~FDyaFDe~~sNe~VYrfTa~PlV~~IF~~G~ATCFAYGQT 301 (676)
T KOG0246|consen 222 KELTKKEIDVISVPSKNVLVVHEPKLKVDLTKYLENQKFRFDYAFDESASNELVYRFTAKPLVKTIFEGGMATCFAYGQT 301 (676)
T ss_pred hhccccccceEeccccceEEeeccccccchHHHHhhceEEEeeecccccchHHHHHHhhhHHHHHHHhCCceeeeeeccC
Confidence 9999999999999 667799999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccC------------CCchhHHHHHHHHhccccccccceeeeeeeEEeeCCeeeccccccccccceecCCCcEE
Q 004530 297 GSGKTFTMQ------------PLPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGERKKLCMREDGRQQVC 364 (746)
Q Consensus 297 GSGKTyTM~------------Gl~~ra~~~LF~~i~~~~~~~~~f~V~vS~lEIYnE~V~DLL~~~~~l~Ired~~~~v~ 364 (746)
||||||||. ||...+.+++|.++.++.++...+.|++||||||+.+|||||+++++|+++||++++|+
T Consensus 302 GSGKT~TMggdfsgk~q~~s~giya~aa~Dvf~~L~~p~Y~~~~l~v~~tFFEIYgGKvfDLL~~k~KLrvLEDg~QQVq 381 (676)
T KOG0246|consen 302 GSGKTYTMGGDFSGKAQDCSKGIYALAARDVFRLLRQPTYRKLDLKVYVTFFEIYGGKVYDLLNDKKKLRVLEDGNQQVQ 381 (676)
T ss_pred CCCceeecccccCcccccccccchhhhhhHHHHHhcccchhhcceEEEEEEEEEeCcchhhhhccccceEEeecCCceEE
Confidence 999999994 57788999999999999999999999999999999999999999999999999999999
Q ss_pred EeccEEEEecCHHHHHHHHHHHHhcCCcccCCCCCCCCCCeEEEEEEEEEeeccccccccCCCCCCCCCeEEEEEEEEEC
Q 004530 365 IVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIEVKESFRRNNDGNESRGKVIGKISFIDL 444 (746)
Q Consensus 365 V~GLtev~V~S~eE~~~lL~~G~~~R~~~sT~~N~~SSRSHaIftI~V~q~~~~~~~~~~~~~g~~~~~~~~skL~fVDL 444 (746)
|.||+|..|.+.+|++++|+.|++.|+++.|..|..|||||+||+|.+..... ....|||.||||
T Consensus 382 VVGLqE~~v~~~eeVl~lIe~Gns~RtsG~TsANs~SSRSHAvfQIilr~~~~---------------~k~hGKfSlIDL 446 (676)
T KOG0246|consen 382 VVGLQEEEVSGVEEVLELIEKGNSCRTSGQTSANSNSSRSHAVFQIILRKHGE---------------FKLHGKFSLIDL 446 (676)
T ss_pred EeeceeeeccCHHHHHHHHHhcccccccCcccCcccccccceeEeeeeecCCc---------------ceeEeEEEEEEc
Confidence 99999999999999999999999999999999999999999999999976421 467899999999
Q ss_pred CCCCCCCCCCCcchhchHHHHHhhHHHHHHHHHHHHHhCCCCCccCCCCcchhhhhhccCC-CcceEEEEEeCCCCCChH
Q 004530 445 AGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVG-NSKTVMISCISPNVGSCE 523 (746)
Q Consensus 445 AGSER~~~t~~~~~~~~~E~~~INkSL~aLg~VI~AL~~~~~hIPYRdSKLTrLLqDsLgG-nskT~mIa~VSPs~~~~e 523 (746)
||+||++++...+++++.||+.|||||+||..||+||..++.|+|||.||||++|+|||-| |++|+||+||||...+++
T Consensus 447 AGnERGaDts~adRqtRlEGAEINKSLLALKECIRaLg~nk~H~PFR~SKLTqVLRDSFIGenSrTcMIA~ISPg~~ScE 526 (676)
T KOG0246|consen 447 AGNERGADTSSADRQTRLEGAEINKSLLALKECIRALGRNKSHLPFRGSKLTQVLRDSFIGENSRTCMIATISPGISSCE 526 (676)
T ss_pred cCCccCCcccccchhhhhhhhhhhHHHHHHHHHHHHhcCCCCCCCchhhhHHHHHHHhhcCCCCceEEEEEeCCCcchhh
Confidence 9999999999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHHhcccccccC
Q 004530 524 HTLNTLRYADRVKSLSKSGN 543 (746)
Q Consensus 524 ETLsTLrfA~Rak~I~~~~~ 543 (746)
+||||||||+|+|++.....
T Consensus 527 hTLNTLRYAdRVKeLsv~~~ 546 (676)
T KOG0246|consen 527 HTLNTLRYADRVKELSVDGG 546 (676)
T ss_pred hhHHHHHHHHHHHhhcCCCC
Confidence 99999999999999965543
|
|
| >KOG4280 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0245 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0242 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >KOG0241 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd00106 KISc Kinesin motor domain | Back alignment and domain information |
|---|
| >smart00129 KISc Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport | Back alignment and domain information |
|---|
| >KOG0247 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0244 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF07647 SAM_2: SAM domain (Sterile alpha motif); InterPro: IPR011510 The sterile alpha motif (SAM) domain is a putative protein interaction module present in a wide variety of proteins [] involved in many biological processes | Back alignment and domain information |
|---|
| >cd00166 SAM Sterile alpha motif | Back alignment and domain information |
|---|
| >COG0556 UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >smart00454 SAM Sterile alpha motif | Back alignment and domain information |
|---|
| >PF00536 SAM_1: SAM domain (Sterile alpha motif); InterPro: IPR021129 The sterile alpha motif (SAM) domain is a putative protein interaction module present in a wide variety of proteins [] involved in many biological processes | Back alignment and domain information |
|---|
| >PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication | Back alignment and domain information |
|---|
| >PRK06893 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PRK06526 transposase; Provisional | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >PRK08116 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK14086 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PRK06620 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK07952 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >PRK08084 DNA replication initiation factor; Provisional | Back alignment and domain information |
|---|
| >PRK14088 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold | Back alignment and domain information |
|---|
| >TIGR02928 orc1/cdc6 family replication initiation protein | Back alignment and domain information |
|---|
| >TIGR00362 DnaA chromosomal replication initiator protein DnaA | Back alignment and domain information |
|---|
| >PF04851 ResIII: Type III restriction enzyme, res subunit; InterPro: IPR006935 This entry represents a domain found in the N terminus of several proteins, including helicases, the R subunit (HsdR) of type I restriction endonucleases (3 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 746 | ||||
| 1v8j_A | 410 | The Crystal Structure Of The Minimal Functional Dom | 1e-102 | ||
| 3edl_D | 331 | Kinesin13-Microtubule Ring Complex Length = 331 | 1e-102 | ||
| 2heh_A | 387 | Crystal Structure Of The Kif2c Motor Domain (Casp T | 1e-101 | ||
| 2gry_A | 420 | Crystal Structure Of The Human Kif2 Motor Domain In | 1e-97 | ||
| 1ry6_A | 360 | Crystal Structure Of Internal Kinesin Motor Domain | 8e-80 | ||
| 4a14_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 1e-47 | ||
| 2xt3_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 2e-47 | ||
| 3b6u_A | 372 | Crystal Structure Of The Motor Domain Of Human Kine | 4e-47 | ||
| 2vvg_A | 350 | Crystal Structure Of The G.Intestinalis Kinesin 2 G | 3e-46 | ||
| 3gbj_A | 354 | Crystal Structure Of The Motor Domain Of Kinesin Ki | 2e-44 | ||
| 3b6v_A | 395 | Crystal Structure Of The Motor Domain Of Human Kine | 9e-44 | ||
| 3lre_A | 355 | Crystal Structure Analysis Of Human Kinesin-8 Motor | 1e-43 | ||
| 3h4s_A | 386 | Structure Of The Complex Of A Mitotic Kinesin With | 8e-43 | ||
| 4aqv_C | 373 | Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma | 2e-42 | ||
| 4a1z_A | 368 | Eg5-1 Length = 368 | 2e-41 | ||
| 4ap0_A | 370 | The Mitotic Kinesin Eg5 In Complex With Mg-Adp And | 5e-41 | ||
| 1q0b_A | 367 | Crystal Structure Of The Motor Protein Ksp In Compl | 6e-41 | ||
| 3hqd_A | 369 | Human Kinesin Eg5 Motor Domain In Complex With Ampp | 6e-41 | ||
| 1ii6_A | 368 | Crystal Structure Of The Mitotic Kinesin Eg5 In Com | 7e-41 | ||
| 1x88_A | 359 | Human Eg5 Motor Domain Bound To Mg-Adp And Monastro | 1e-40 | ||
| 4a28_A | 368 | Eg5-2 Length = 368 | 1e-40 | ||
| 3zcw_A | 348 | Eg5 - New Allosteric Binding Site Length = 348 | 1e-40 | ||
| 1ia0_K | 394 | Kif1a Head-Microtubule Complex Structure In Atp-For | 2e-40 | ||
| 1i5s_A | 367 | Crystal Structure Of The Kif1a Motor Domain Complex | 3e-40 | ||
| 1i6i_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 3e-40 | ||
| 1vfv_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 1e-39 | ||
| 1goj_A | 355 | Structure Of A Fast Kinesin: Implications For Atpas | 2e-39 | ||
| 1sdm_A | 369 | Crystal Structure Of Kinesin-Like Calmodulin Bindin | 2e-39 | ||
| 2wbe_C | 373 | Kinesin-5-Tubulin Complex With Amppnp Length = 373 | 8e-39 | ||
| 2h58_A | 330 | Crystal Structure Of The Kifc3 Motor Domain In Comp | 9e-37 | ||
| 1bg2_A | 325 | Human Ubiquitous Kinesin Motor Domain Length = 325 | 2e-36 | ||
| 1mkj_A | 349 | Human Kinesin Motor Domain With Docked Neck Linker | 2e-36 | ||
| 2y5w_A | 365 | Crystal Structure Of Drosophila Melanogaster Kinesi | 2e-36 | ||
| 4atx_C | 340 | Rigor Kinesin Motor Domain With An Ordered Neck-Lin | 6e-36 | ||
| 1t5c_A | 349 | Crystal Structure Of The Motor Domain Of Human Kine | 6e-36 | ||
| 3bfn_A | 388 | Crystal Structure Of The Motor Domain Of Human Kine | 2e-34 | ||
| 4etp_A | 403 | C-Terminal Motor And Motor Homology Domain Of Kar3v | 7e-33 | ||
| 3u06_A | 412 | Crystal Structure Of The Kinesin-14 Ncdg347d Length | 3e-32 | ||
| 1cz7_A | 406 | The Crystal Structure Of A Minus-End Directed Micro | 4e-32 | ||
| 2ncd_A | 420 | Ncd (Non-Claret Disjunctional) Dimer From D. Melano | 6e-32 | ||
| 2owm_A | 443 | Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3 | 8e-32 | ||
| 3kar_A | 346 | The Motor Domain Of Kinesin-Like Protein Kar3, A Sa | 8e-32 | ||
| 1f9t_A | 358 | Crystal Structures Of Kinesin Mutants Reveal A Sign | 1e-31 | ||
| 4gkr_A | 371 | Structure Of The C-Terminal Motor Domain Of Kar3 Fr | 1e-31 | ||
| 3l1c_A | 383 | Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | 2e-31 | ||
| 1n6m_A | 409 | Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY | 2e-31 | ||
| 1f9w_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 5e-31 | ||
| 1f9v_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 6e-31 | ||
| 3t0q_A | 349 | Motor Domain Structure Of The Kar3-Like Kinesin Fro | 7e-31 | ||
| 1f9u_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 7e-31 | ||
| 3pxn_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 6e-30 | ||
| 3dc4_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 1e-29 | ||
| 2rep_A | 376 | Crystal Structure Of The Motor Domain Of Human Kine | 6e-29 | ||
| 4h1g_A | 715 | Structure Of Candida Albicans Kar3 Motor Domain Fus | 1e-28 | ||
| 3nwn_A | 359 | Crystal Structure Of The Human Kif9 Motor Domain In | 3e-26 | ||
| 2kin_A | 238 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 3e-24 | ||
| 2kin_B | 100 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 5e-09 | ||
| 3kin_B | 117 | Kinesin (Dimeric) From Rattus Norvegicus Length = 1 | 2e-08 |
| >pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410 | Back alignment and structure |
|
| >pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331 | Back alignment and structure |
| >pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387 | Back alignment and structure |
| >pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420 | Back alignment and structure |
| >pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360 | Back alignment and structure |
| >pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372 | Back alignment and structure |
| >pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350 | Back alignment and structure |
| >pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354 | Back alignment and structure |
| >pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 | Back alignment and structure |
| >pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355 | Back alignment and structure |
| >pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386 | Back alignment and structure |
| >pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373 | Back alignment and structure |
| >pdb|4A1Z|A Chain A, Eg5-1 Length = 368 | Back alignment and structure |
| >pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370 | Back alignment and structure |
| >pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367 | Back alignment and structure |
| >pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369 | Back alignment and structure |
| >pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368 | Back alignment and structure |
| >pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359 | Back alignment and structure |
| >pdb|4A28|A Chain A, Eg5-2 Length = 368 | Back alignment and structure |
| >pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348 | Back alignment and structure |
| >pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394 | Back alignment and structure |
| >pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367 | Back alignment and structure |
| >pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366 | Back alignment and structure |
| >pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366 | Back alignment and structure |
| >pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355 | Back alignment and structure |
| >pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369 | Back alignment and structure |
| >pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373 | Back alignment and structure |
| >pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330 | Back alignment and structure |
| >pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325 | Back alignment and structure |
| >pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349 | Back alignment and structure |
| >pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365 | Back alignment and structure |
| >pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340 | Back alignment and structure |
| >pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349 | Back alignment and structure |
| >pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388 | Back alignment and structure |
| >pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403 | Back alignment and structure |
| >pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412 | Back alignment and structure |
| >pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406 | Back alignment and structure |
| >pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420 | Back alignment and structure |
| >pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443 | Back alignment and structure |
| >pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346 | Back alignment and structure |
| >pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358 | Back alignment and structure |
| >pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371 | Back alignment and structure |
| >pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | Back alignment and structure |
| >pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409 | Back alignment and structure |
| >pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349 | Back alignment and structure |
| >pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|3PXN|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Kin10NOD IN Complex With Divalent Manganese And Adp Length = 344 | Back alignment and structure |
| >pdb|3DC4|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Nod In Complex With Adp Length = 344 | Back alignment and structure |
| >pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376 | Back alignment and structure |
| >pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715 | Back alignment and structure |
| >pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359 | Back alignment and structure |
| >pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238 | Back alignment and structure |
| >pdb|2KIN|B Chain B, Kinesin (Monomeric) From Rattus Norvegicus Length = 100 | Back alignment and structure |
| >pdb|3KIN|B Chain B, Kinesin (Dimeric) From Rattus Norvegicus Length = 117 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 | Back alignment and structure |
|---|
Score = 516 bits (1331), Expect = e-179
Identities = 191/377 (50%), Positives = 246/377 (65%), Gaps = 37/377 (9%)
Query: 178 KEQTDADASAPVPTNEKESNARENNVAKIRVVVRKRPLNKKELSRKEEDIVTVSDN-ALT 236
KE P+ + R I V VRKRPLNK+EL++KE D++++ L
Sbjct: 31 KEFRATLECHPLTMTDPIEEHR------ICVCVRKRPLNKQELAKKEIDVISIPSKCLLL 84
Query: 237 VHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQT 296
VHEPKLKVDLT Y+E FCFD DE +N+ VYR T P++ TIF+ KATCFAYGQT
Sbjct: 85 VHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQTIFEGGKATCFAYGQT 144
Query: 297 GSGKTFTM------------QPLPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLF 344
GSGKT TM + + A+ D+ L +QP YR ++++++FEIY GKLF
Sbjct: 145 GSGKTHTMGGDLSGKAQNASKGIYAMASRDVFLLKNQPCYRKLGLEVYVTFFEIYNGKLF 204
Query: 345 DLLGERKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRS 404
DLL ++ KL + EDG+QQV +VGLQE V+ V + I+ G+A R++G T AN SSRS
Sbjct: 205 DLLNKKAKLRVLEDGKQQVQVVGLQEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRS 264
Query: 405 HAILQLAIKKHIEVKESFRRNNDGNESRGKVIGKISFIDLAGSERGADTTDNDRQTRIEG 464
HA Q+ + ++G++ GK S +DLAG+ERGADT+ DRQTR+EG
Sbjct: 265 HACFQIIL-----------------RAKGRMHGKFSLVDLAGNERGADTSSADRQTRMEG 307
Query: 465 AEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVG-NSKTVMISCISPNVGSCE 523
AEINKSLLALKECIRAL ++ H PFR SKLT+VLRDSF+G NS+T MI+ ISP + SCE
Sbjct: 308 AEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSRTCMIATISPGISSCE 367
Query: 524 HTLNTLRYADRVKSLSK 540
+TLNTLRYADRVK LS
Sbjct: 368 YTLNTLRYADRVKELSP 384
|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360 | Back alignment and structure |
|---|
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 | Back alignment and structure |
|---|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 | Back alignment and structure |
|---|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 | Back alignment and structure |
|---|
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 | Back alignment and structure |
|---|
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 | Back alignment and structure |
|---|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 | Back alignment and structure |
|---|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 | Back alignment and structure |
|---|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 | Back alignment and structure |
|---|
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369 | Back alignment and structure |
|---|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330 | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443 | Back alignment and structure |
|---|
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412 | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376 | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347 | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403 | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349 | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 746 | ||||
| d1v8ka_ | 362 | c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c | 2e-90 | |
| d1ry6a_ | 330 | c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu | 1e-86 | |
| d1x88a1 | 345 | c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), | 1e-76 | |
| d2zfia1 | 349 | c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), | 2e-76 | |
| d1bg2a_ | 323 | c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId | 2e-76 | |
| d1goja_ | 354 | c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5 | 5e-72 | |
| d1f9va_ | 342 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 1e-68 | |
| d2ncda_ | 368 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 1e-67 | |
| d1sdma_ | 364 | c.37.1.9 (A:) Kinesin heavy chain-like protein {Po | 8e-66 |
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin species: Mouse (Mus musculus), kif2c [TaxId: 10090]
Score = 285 bits (730), Expect = 2e-90
Identities = 188/349 (53%), Positives = 241/349 (69%), Gaps = 31/349 (8%)
Query: 205 KIRVVVRKRPLNKKELSRKEEDIVTVSDN-ALTVHEPKLKVDLTAYVEKHEFCFDAVLDE 263
+I V VRKRPLNK+EL++KE D+++V L VHEPKLKVDLT Y+E FCFD DE
Sbjct: 31 RICVCVRKRPLNKQELAKKEIDVISVPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDE 90
Query: 264 RVTNDEVYRVTVEPIIPTIFQRTKATCFAYGQTGSGKTFTMQP------------LPLRA 311
+N+ VYR T P++ TIF+ KATCFAYGQTGSGKT TM + A
Sbjct: 91 TASNEVVYRFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMA 150
Query: 312 AEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGERKKLCMREDGRQQVCIVGLQEF 371
+ D+ L +QP YRN ++++++FEIY GK+FDLL ++ KL + ED RQQV +VGLQE+
Sbjct: 151 SRDVFLLKNQPRYRNLNLEVYVTFFEIYNGKVFDLLNKKAKLRVLEDSRQQVQVVGLQEY 210
Query: 372 EVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIEVKESFRRNNDGNES 431
V+ V + I G+A R++G T AN SSRSHA Q+ ++ +
Sbjct: 211 LVTCADDVIKMINMGSACRTSGQTFANSNSSRSHACFQILLR-----------------T 253
Query: 432 RGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFR 491
+G++ GK S +DLAG+ERGADT+ DRQTR+EGAEINKSLLALKECIRAL ++ H PFR
Sbjct: 254 KGRLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFR 313
Query: 492 GSKLTEVLRDSFVG-NSKTVMISCISPNVGSCEHTLNTLRYADRVKSLS 539
SKLT+VLRDSF+G NS+T MI+ ISP + SCE+TLNTLRYADRVK LS
Sbjct: 314 ESKLTQVLRDSFIGENSRTCMIAMISPGISSCEYTLNTLRYADRVKELS 362
|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330 | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349 | Back information, alignment and structure |
|---|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
|---|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354 | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368 | Back information, alignment and structure |
|---|
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 746 | |||
| d1v8ka_ | 362 | Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 | 100.0 | |
| d1sdma_ | 364 | Kinesin heavy chain-like protein {Potato (Solanum | 100.0 | |
| d1ry6a_ | 330 | Kinesin {Malaria parasite (Plasmodium falciparum) | 100.0 | |
| d1goja_ | 354 | Kinesin {Neurospora crassa [TaxId: 5141]} | 100.0 | |
| d2zfia1 | 349 | Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 | 100.0 | |
| d1x88a1 | 345 | Kinesin {Human (Homo sapiens), mitotic kinesin eg5 | 100.0 | |
| d2ncda_ | 368 | Kinesin motor Ncd (non-claret disjunctional) {Frui | 100.0 | |
| d1bg2a_ | 323 | Kinesin {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1f9va_ | 342 | Kinesin motor Ncd (non-claret disjunctional) {Bake | 100.0 | |
| d1v38a_ | 78 | Sam-domain protein samsn-1 {Mouse (Mus musculus) [ | 95.42 | |
| d2f3na1 | 64 | Sh3 and multiple ankyrin repeat domains 3 (Shank3) | 95.23 | |
| d1ucva_ | 81 | Ephrin type-A receptor 8, C-terminal domain {Human | 94.52 | |
| d1b4fa_ | 74 | EphB2 receptor {Human (Homo sapiens) [TaxId: 9606] | 94.37 | |
| d1l8qa2 | 213 | Chromosomal replication initiation factor DnaA {Aq | 94.29 | |
| d1wwva1 | 78 | Connector enhancer of kinase suppressor of Ras 1, | 94.22 | |
| d1ow5a_ | 60 | Serine/threonine-protein kinase ste11 {Baker's yea | 94.09 | |
| d1b0xa_ | 72 | EphA4 receptor tyrosine kinases {Mouse (Mus muscul | 94.03 | |
| d1x40a1 | 78 | Centaurin-delta 1 (Arap2) {Human(Homo sapiens) [Ta | 92.12 | |
| d1r7ra3 | 265 | Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu | 91.2 | |
| d2d8ca1 | 85 | Sphingomyelin synthase 1, SMS1 {Mouse (Mus musculu | 91.11 | |
| d1w5sa2 | 287 | CDC6-like protein APE0152, N-terminal domain {Aero | 90.44 | |
| d1pk3a1 | 63 | Polycomb protein Scm {Fruit fly (Drosophila melano | 90.34 | |
| d1kw4a_ | 70 | Polyhomeotic {Drosophila melanogaster [TaxId: 7227 | 88.53 | |
| d1kk8a2 | 789 | Myosin S1, motor domain {Bay scallop (Aequipecten | 87.99 | |
| d1gvnb_ | 273 | Plasmid maintenance system epsilon/zeta, toxin zet | 87.8 | |
| d1br2a2 | 710 | Myosin S1, motor domain {Chicken (Gallus gallus), | 87.62 | |
| d1p9ra_ | 401 | Extracellular secretion NTPase EpsE {Vibrio choler | 87.06 | |
| d1oxja1 | 62 | RNA-binding protein Smaug {Drosophila melanogaster | 87.03 | |
| d1fnna2 | 276 | CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T | 86.49 | |
| d1dxsa_ | 57 | C-terminal domain of p73 {Human (Homo sapiens) [Ta | 84.29 | |
| d1e32a2 | 258 | Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu | 82.59 | |
| d1gkub1 | 237 | Helicase-like "domain" of reverse gyrase {Archaeon | 80.8 | |
| d1d2na_ | 246 | Hexamerization domain of N-ethylmalemide-sensitive | 80.3 |
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin species: Mouse (Mus musculus), kif2c [TaxId: 10090]
Probab=100.00 E-value=0 Score=621.50 Aligned_cols=320 Identities=58% Similarity=0.893 Sum_probs=297.5
Q ss_pred CCCEEEEEEECCCCCHHHCCCCCCEEEEECCE-EEEECCCCCCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHH
Q ss_conf 99809999819999211015997479980990-89937874345454320048993004089998588887532324888
Q 004530 203 VAKIRVVVRKRPLNKKELSRKEEDIVTVSDNA-LTVHEPKLKVDLTAYVEKHEFCFDAVLDERVTNDEVYRVTVEPIIPT 281 (746)
Q Consensus 203 ~~~IrV~vRVRPl~~~E~~~~~~~iv~v~~~~-v~i~~p~~~~~~~~~~~~~~F~FD~VFd~~asQ~eVY~~~v~pLV~~ 281 (746)
.++|+|+|||||+++.|...++.+++.++++. +.+.+|+...+.....+.+.|.||+||+++++|++||+.++.|+|++
T Consensus 29 ~~~I~V~vRvRPl~~~E~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~f~FD~vf~~~~~Q~~Vy~~~~~plv~~ 108 (362)
T d1v8ka_ 29 EHRICVCVRKRPLNKQELAKKEIDVISVPSKCLLLVHEPKLKVDLTKYLENQAFCFDFAFDETASNEVVYRFTARPLVQT 108 (362)
T ss_dssp CCCEEEEEEECCCCHHHHHTTCCBCEECCSSSEEEEEEEEECTTCCEEEEEEEEECSEEECTTCCHHHHHHHTTHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCCCCEEEECCEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 88889999808999688637994699988991899818864446556768606767866199999899999999999999
Q ss_pred HHCCCCCCEEECCCCCCCCCCCCCC------------CCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCEEECCCCC
Q ss_conf 6407885222013689998632588------------8055899999996154333542014322478667765204566
Q 004530 282 IFQRTKATCFAYGQTGSGKTFTMQP------------LPLRAAEDLVRLLHQPVYRNQRFKLWLSYFEIYGGKLFDLLGE 349 (746)
Q Consensus 282 vl~G~N~tIfAYGqTGSGKTyTM~G------------l~~ra~~dLF~~i~~~~~~~~~f~V~vSflEIYnE~I~DLLs~ 349 (746)
+++|||+||||||||||||||||+| ++||++++||..+.....+...|.|++||+|||||+++|||++
T Consensus 109 ~l~G~n~tifaYGqTGSGKTyTm~G~~~~~~~~~~~Giipr~~~~lf~~~~~~~~~~~~~~v~vS~~EIyne~i~DLL~~ 188 (362)
T d1v8ka_ 109 IFEGGKATCFAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFLLKNQPRYRNLNLEVYVTFFEIYNGKVFDLLNK 188 (362)
T ss_dssp HHTTCEEEEEEEESTTSSHHHHHHCBC----CBGGGSHHHHHHHHHHHHHTSHHHHTTCCEEEEEEEEEETTEEEETTTT
T ss_pred HHHCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCHHHEEEEEEECCCEEEECCCC
T ss_conf 87416813886325788886033305778765556871331155677776301234632331102146327748763457
Q ss_pred CCCCCCEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCC
Q ss_conf 33322010599947990308999438989999999987227756679988889875899999997410000002479999
Q 004530 350 RKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEYIEKGNAARSTGSTGANEESSRSHAILQLAIKKHIEVKESFRRNNDGN 429 (746)
Q Consensus 350 ~~~L~Ired~~~gv~V~GLtev~V~S~eEv~~lL~~G~~~RstasT~~N~~SSRSHaIftI~V~q~~~~~~~~~~~~~~~ 429 (746)
...+.+++++.+++++.|++++.|.+++|++.++..|..+|.+++|.+|..|||||+||+|.|.+.
T Consensus 189 ~~~~~~~~~~~~~~~v~gl~e~~v~s~~e~~~~l~~g~~~R~~~~T~~N~~SSRSH~i~~i~i~~~-------------- 254 (362)
T d1v8ka_ 189 KAKLRVLEDSRQQVQVVGLQEYLVTCADDVIKMINMGSACRTSGQTFANSNSSRSHACFQILLRTK-------------- 254 (362)
T ss_dssp TEEEEEEECSSCCEEEETCCCEEESSHHHHHHHHHHHHHTCC--------CCCSSEEEEEEEEESS--------------
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEEC--------------
T ss_conf 754432212457746589889994688998998741454543024567456751005799999855--------------
Q ss_pred CCCCEEEEEEEEEECCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHC-CCCCCC
Q ss_conf 9887488799999778987877788764020498888569799999999998089997558999540445410-489860
Q 004530 430 ESRGKVIGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDS-FVGNSK 508 (746)
Q Consensus 430 ~~~~~~~skL~fVDLAGSER~~~t~~~~~~~~~E~~~INkSL~aLg~vI~AL~~~~~hIPyRdSKLTrLLkds-LgGnsk 508 (746)
....++|+|||||||||..++...++.++.|+..||+||++|++||.+|..++.|||||+||||+||||+ +||||+
T Consensus 255 ---~~~~~~l~~VDLAGsEr~~~~~~~~~~~~~E~~~IN~SL~~L~~vi~aL~~~~~hiPyR~SkLT~lLkdsllGgns~ 331 (362)
T d1v8ka_ 255 ---GRLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSLLALKECIRALGQNKAHTPFRESKLTQVLRDSFIGENSR 331 (362)
T ss_dssp ---SSEEEEEEEEECCCCCC------------TTHHHHHHHHHHHHHHHHHHTC------CCCCHHHHHTTHHHHSSSEE
T ss_pred ---CEEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCC
T ss_conf ---60013676520256655444445315655333221110778999999985699968874688888613304799861
Q ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 2899974799989688999999899842432
Q 004530 509 TVMISCISPNVGSCEHTLNTLRYADRVKSLS 539 (746)
Q Consensus 509 T~lIacVSP~~~~~~ETLsTLrfA~Rvk~Ik 539 (746)
|+||+||||...+++||++||+||+|+|+|.
T Consensus 332 t~~i~~vsp~~~~~~eTl~TL~fa~rak~It 362 (362)
T d1v8ka_ 332 TCMIAMISPGISSCEYTLNTLRYADRVKELS 362 (362)
T ss_dssp EEEEEEECCBGGGHHHHHHHHHHHHHHHTTC
T ss_pred EEEEEEECCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999996987010899999999999974379
|
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1v38a_ a.60.1.2 (A:) Sam-domain protein samsn-1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2f3na1 a.60.1.2 (A:2-65) Sh3 and multiple ankyrin repeat domains 3 (Shank3) {Rat(Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d1ucva_ a.60.1.2 (A:) Ephrin type-A receptor 8, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1b4fa_ a.60.1.2 (A:) EphB2 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1wwva1 a.60.1.2 (A:8-85) Connector enhancer of kinase suppressor of Ras 1, CNK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ow5a_ a.60.1.2 (A:) Serine/threonine-protein kinase ste11 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1b0xa_ a.60.1.2 (A:) EphA4 receptor tyrosine kinases {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1x40a1 a.60.1.2 (A:8-85) Centaurin-delta 1 (Arap2) {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d2d8ca1 a.60.1.2 (A:7-91) Sphingomyelin synthase 1, SMS1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
| >d1pk3a1 a.60.1.2 (A:17-79) Polycomb protein Scm {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1kw4a_ a.60.1.2 (A:) Polyhomeotic {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} | Back information, alignment and structure |
|---|
| >d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
| >d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} | Back information, alignment and structure |
|---|
| >d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d1oxja1 a.60.1.2 (A:594-655) RNA-binding protein Smaug {Drosophila melanogaster [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
| >d1dxsa_ a.60.1.2 (A:) C-terminal domain of p73 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
| >d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]} | Back information, alignment and structure |
|---|