Citrus Sinensis ID: 004556

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-----
MVECSKGRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSDKALVKHLQRELSRLENELRGSGPVFITPDSVSVLREKDLRIEKLEKEVDELTMQRDLARTEVENLLRGAGKGSAESPPVVYVDDRPPVVYAGLDHQYPRLRVRSSWDFENLNIETQNMIPHCIDISVRSSDTSPCSDGHSSSDENFFPLPSLEENILKTKCNEQDEVSVPSFVGTDLHQEEIEEQNDENADVYKNVGCVQMGKGTTGYTDLKKSEPSLNKDRDLNMTSVDINPATSGVAETEDEDEQCGESRSTTLKEQNELNNIILNSVTPSTVEPSPWRPEKYTPTPSILNLTRSRSCKACLMTSYSPDWFENDEKVVSTPPIVFEKDFTGRPRGLEIKVSALKYAADTEISSTNESQTSARSSSFDDLKSQNVVTPEVAENIGTSARSSTLDIKSQNVKAPDDAENTRNSARSPAFADLKSRNNKTPGAAESTSESISVAQMVEMTEPRNEMQPADNVDTLLKSGVPAKSVRDIGVDNIQEDFINHWEWPLEFKRLQREIIELWHACNVSLVHRTYFFLLFKGDPKDSIYMEVEQRRLSFLKDSFSRGNDAIEDGRTVSLASSMKALRRERHMLSQHVKKRFSREQRENLFLKWGIGLQTKHRSLQLAHLLWTSKDLNHVAESAAIVSKLVTFVKPDQAFREMFGLNFAPRRPNKKFSLLKRSVISIL
cccccccccccccccccHHHHHccccccccccEEEEEEcccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHcccccccHHHHHHccccHHHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHcccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHccccccHHHHHccccccHHHHHccccccccHHHcccccccccHHHHHccccccccHHHHHHcccccHHHHHHHHHcccccccccccHHHHHHHHHHHHccccccccccccHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccHHHHHHcccccccccccccccccHHHcccc
cccHHHcccccccHHHcHHHHHHHHccccccEEEEEEEEccEHHHHHHHHHHHHHHHcccccEEEEccEEEccHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHcHHHcccccccHHHccccccccccccccHHHHccccccHHHcccccHHHHcccHHHHHHHHcccccccccccccccccccccccccccccccHHHHHcccccEEcccccccccccccccccccccccccccccccccccccccccccccHcccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccEEEHHHHEEEEcccccccEEEEEEHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccccccHHHHHcccccccccccccccccccccccc
mvecskgrnghvpfrdskLTRILQSSLGGNARTAIICtlsparshveQSRNTLLFASCAKEVTTNAQVNIVMSDKALVKHLQRELSRLENelrgsgpvfitpdsvsvLREKDLRIEKLEKEVDELTMQRDLARTEVENLLrgagkgsaesppvvyvddrppvvyagldhqyprlrvrsswdfenlnietqnmiphcidisvrssdtspcsdghsssdenffplpsleeNILKtkcneqdevsvpsfvgtdlhqeeieeqndenadvyknvgcvqmgkgttgytdlkksepslnkdrdlnmtsvdinpatsgvaetededeqcgesrSTTLKEQNELNNIIlnsvtpstvepspwrpekytptpsilnltrsrsckaclmtsyspdwfendekvvstppivfekdftgrprgleIKVSALKYAAdteisstnesqtsarsssfddlksqnvvtpevaenigtsarsstldiksqnvkapddaentrnsarspafadlksrnnktpgaaestsESISVAQMVEmteprnemqpadnvDTLLksgvpaksvrdigvdniqedfinhwewpLEFKRLQREIIELWHACNVSLVHRTYFFLLfkgdpkdsiyMEVEQRRLSFLKDsfsrgndaiedgRTVSLASSMKALRRERHMLSQHVKKRFSREQRENLFLKWGIGLQTKHRSLQLAHLLWTSKDLNHVAESAAIVSKLVTFVKPDQAFREmfglnfaprrpnkkfslLKRSVISIL
mvecskgrnghvpfrdsklTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSDKALVKHLQRELSRlenelrgsgpvfitpdsvsvlreKDLRIEKLekevdeltmqrdlARTEVENLlrgagkgsaesppvvyvDDRPPVVYAGLDHQYPRLRVRSSWDFENLNIETQNMIPHCIDISVRSSDTSPCSDGHSSSDENFFPLPSLEENILKTKCNEQDEVSVPSFVGTDLHQEEIEeqndenadvyKNVGCVQMgkgttgytdlkksepslnkdrdlnmtsvdinpatsgvaetededeqCGESRSTTlkeqnelnniilnsvtpstvepspwrpekytptpsilnltrsrSCKACLMTSyspdwfendekvvSTPPIvfekdftgrprgLEIKVSALKYAADteisstnesqtsarsssfddlksqnVVTPEVaenigtsarsstldiksqnvkapddaentrnsarspafadlksrnnktpgaaestsesiSVAQMVEMTEPRNEMQPADNVDTLLKSGVPAKSVRDIGVDNIQEDFINHWEWPLEFKRLQREIIELWHACNVSLVHRTYFFLLFKGDPKDSIYMEVEQRRLSflkdsfsrgndaiedgrtvSLASSMKALRRERHMLSqhvkkrfsreqreNLFLKWGIGLQTKHRSLQLAHLLWTSKDLNHVAESAAIVSKLVTFVKPDQAFREMFglnfaprrpnkkfsllkrsvisil
MVECSKGRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSDKALVKHLQRELSRLENELRGSGPVFITPDSVSVLREKDLRIEKLEKEVDELTMQRDLARTEVENLLRGAGKGSAESppvvyvddrppvvyAGLDHQYPRLRVRSSWDFENLNIETQNMIPHCIDISVRSSDTSPCSDGHSSSDENFFPLPSLEENILKTKCNEQDEVSVPSFVGTDLHQEEIEEQNDENADVYKNVGCVQMGKGTTGYTDLKKSEPSLNKDRDLNMTSVDINPATSGVAETEDEDEQCGESRSTTLKEQNELNNIILNSVTPSTVEPSPWRPEKYTPTPSILNLTRSRSCKACLMTSYSPDWFENDEKVVSTPPIVFEKDFTGRPRGLEIKVSALKYAADTEISSTNESQTSARSSSFDDLKSQNVVTPEVAENIGTSARSSTLDIKSQNVKAPDDAENTRNSARSPAFADLKSRNNKTPGAAESTSESISVAQMVEMTEPRNEMQPADNVDTLLKSGVPAKSVRDIGVDNIQEDFINHWEWPLEFKRLQREIIELWHACNVSLVHRTYFFLLFKGDPKDSIYMEVEQRRLSFLKDSFSRGNDAIEDGRTVSLASSMKALRRERHMLSQHVKKRFSREQRENLFLKWGIGLQTKHRSLQLAHLLWTSKDLNHVAESAAIVSKLVTFVKPDQAFREMFGLNFAPRRPNKKFSLLKRSVISIL
*******************TRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSDKALVKHLQREL**********GPVFITPDSVSVL********************************************VVYVDDRPPVVYAGLDHQYPRLRVRSSWDFENLNIETQNMIPHCIDISV****************************************************************VYKNVGCVQMGK***************************************************************************************ILNLTRSRSCKACLMTSYSPDWFENDEKVVSTPPIVFEKDFTGRPRGLEIKVSALKYA***************************************************************************************************************************KSVRDIGVDNIQEDFINHWEWPLEFKRLQREIIELWHACNVSLVHRTYFFLLFKGDPKDSIYMEVEQRRLSFL**********************************************ENLFLKWGIGLQTKHRSLQLAHLLWTSKDLNHVAESAAIVSKLVTFVKPDQAFREMFGLNFAP******************
***********VPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSDKALVKHLQRELSR****************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************RLQREIIELWHACNVSLVHRTYFFLLFKGDPKDSIYMEVEQRRLSFLKDSFS**************************ML***********QR*NLFLKWGIGLQTKHRSLQLAHLLWTSKDLNHVAESAAIVSKLVTFVKPDQAFREMFGLNFAPRR********KRSVISIL
*********GHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSDKALVKHLQRELSRLENELRGSGPVFITPDSVSVLREKDLRIEKLEKEVDELTMQRDLARTEVENLLRG********PPVVYVDDRPPVVYAGLDHQYPRLRVRSSWDFENLNIETQNMIPHCIDISVR***************ENFFPLPSLEENILKTKCNEQDEVSVPSFVGTDLHQEEIEEQNDENADVYKNVGCVQMGKGTTGYTDLKKSEPSLNKDRDLNMTSVDINPAT*******************TLKEQNELNNIILNSVT*********RPEKYTPTPSILNLTRSRSCKACLMTSYSPDWFENDEKVVSTPPIVFEKDFTGRPRGLEIKVSALKYAADT*********************SQNVVTPEVAENIGTSARSSTLDIKS******************PAFADLKS***************ISVAQMVEMTEPRNEMQPADNVDTLLKSGVPAKSVRDIGVDNIQEDFINHWEWPLEFKRLQREIIELWHACNVSLVHRTYFFLLFKGDPKDSIYMEVEQRRLSFLKDSFSRGNDAIEDGRTVSLASSMKALRRERHMLSQHVKKRFSREQRENLFLKWGIGLQTKHRSLQLAHLLWTSKDLNHVAESAAIVSKLVTFVKPDQAFREMFGLNFAPRRPNKKFSLLKRSVISIL
MVE**KGRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSDKALVKHLQRELSRLENELRGSGPVFITPDSVSVLREKDLRIEKLEKEVDELTMQRDLARTEVENLLRGAG*GSAESPPVVYVDDRPPVVYAGLDHQYPRLR**************QNMIPHCIDISVRSSDTSPCS*****S*ENFFPLPSLEENI*********************************ADVYKNVGCVQMG************************************************************************************************************************************P***************************************************************************************************ST*ESISVAQMVEMTEPRNEMQP*DNVDTLLKS*********************HWEWPLEFKRLQREIIELWHACNVSLVHRTYFFLLFKGDPKDSIYMEVEQRRLSFLKDSFSRGN******RTVSLASSM*ALRRERHMLSQHVKKRFSREQRENLFLKWGIGLQTKHRSLQLAHLLWTSKDLNHVAESAAIVSKLVTFVKPDQAFREMFGLNFAPR******SLLKR******
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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iiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MVECSKGRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIxxxxxxxxxxxxxxxxxxxxxLRGSGPVFITPDSVSVxxxxxxxxxxxxxxxxxxxxxxxxxxxxVENLLRGAGKGSAESPPVVYVDDRPPVVYAGLDHQYPRLRVRSSWDFENLNIETQNMIPHCIDISVRSSDTSPCSDGHSSSDENFFPLPSLEENILKTKCNEQDEVSVPSFVGTDLHQEEIEEQNDENADVYKNVGCVQMGKGTTGYTDLKKSEPSLNKDRDLNMTSVDINPATSGVAETEDEDEQCGESRSTTLKEQNELNNIILNSVTPSTVEPSPWRPEKYTPTPSILNLTRSRSCKACLMTSYSPDWFENDEKVVSTPPIVFEKDFTGRPRGLEIKVSALKYAADTEISSTNESQTSARSSSFDDLKSQNVVTPEVAENIGTSARSSTLDIKSQNVKAPDDAENTRNSARSPAFADLKSRNNKTPGAAESTSESISVAQMVEMTEPRNEMQPADNVDTLLKSGVPAKSVRDIGVDNIQEDFINHWEWPLEFKRLQREIIELWHACNVSLVHRTYFFLLFKGDPKDSIYMEVEQRRLSFLKDSFSRGNDAIEDGRTVSLASSMKALRRERHMLSQHVKKRFSREQRENLFLKWGIGLQTKHRSLQLAHLLWTSKDLNHVAESAAIVSKLVTFVKPDQAFREMFGLNFAPRRPNKKFSLLKRSVISIL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query745 2.2.26 [Sep-21-2011]
Q6S001685 Kinesin-related protein 1 yes no 0.151 0.164 0.443 5e-20
Q54NP8 1922 Kinesin-related protein 4 no no 0.118 0.045 0.511 5e-19
P287421111 Kinesin-like protein KIP1 yes no 0.175 0.117 0.345 4e-16
Q8J1G41129 Kinesin-like protein KIP1 yes no 0.158 0.104 0.363 5e-16
Q917831067 Kinesin-like protein KIF1 N/A no 0.169 0.118 0.389 7e-16
P527321056 Kinesin-like protein KIF1 yes no 0.139 0.098 0.429 1e-15
P280251067 Kinesin-like protein KIF1 N/A no 0.157 0.109 0.4 1e-15
Q6P9P61052 Kinesin-like protein KIF1 yes no 0.139 0.098 0.420 2e-15
P278951000 Kinesin-like protein CIN8 no no 0.165 0.123 0.348 9e-15
B2GU581067 Kinesin-like protein KIF1 no no 0.169 0.118 0.366 1e-14
>sp|Q6S001|KIF11_DICDI Kinesin-related protein 11 OS=Dictyostelium discoideum GN=kif11 PE=3 SV=1 Back     alignment and function desciption
 Score =  100 bits (248), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 55/124 (44%), Positives = 86/124 (69%), Gaps = 11/124 (8%)

Query: 10  GHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVN 69
           G++P+RDSKLTR+LQ+SL GN+R AIICT++ A ++ E+S NTL FAS AK+++ NA+VN
Sbjct: 353 GYIPYRDSKLTRVLQNSLSGNSRVAIICTITLASNNFEESHNTLKFASRAKKISNNAKVN 412

Query: 70  IVMSDKALVKHLQRELSRLENELRGSGPVFITPDSVSVLREKDLRIEKLEKEVDELTMQR 129
            ++ DKAL+K  + E++ L+++L          D++S   EK+L+    EKE  ++T Q 
Sbjct: 413 EILDDKALLKQYRNEIAELKSKLS---------DALST--EKELQETLTEKEKMKITNQE 461

Query: 130 DLAR 133
            L +
Sbjct: 462 LLHK 465
Microtubule-associated force-producing protein that plays a role in organelle transport. Its motor activity is directed toward the microtubule's plus end.
Dictyostelium discoideum (taxid: 44689)
>sp|Q54NP8|KIF4_DICDI Kinesin-related protein 4 OS=Dictyostelium discoideum GN=kif4 PE=2 SV=1 Back     alignment and function description
>sp|P28742|KIP1_YEAST Kinesin-like protein KIP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KIP1 PE=1 SV=1 Back     alignment and function description
>sp|Q8J1G4|KIP1_ASHGO Kinesin-like protein KIP1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=KIP1 PE=3 SV=1 Back     alignment and function description
>sp|Q91783|KI11A_XENLA Kinesin-like protein KIF11-A OS=Xenopus laevis GN=kif11-a PE=1 SV=1 Back     alignment and function description
>sp|P52732|KIF11_HUMAN Kinesin-like protein KIF11 OS=Homo sapiens GN=KIF11 PE=1 SV=2 Back     alignment and function description
>sp|P28025|KI11B_XENLA Kinesin-like protein KIF11-B OS=Xenopus laevis GN=kif11-b PE=1 SV=2 Back     alignment and function description
>sp|Q6P9P6|KIF11_MOUSE Kinesin-like protein KIF11 OS=Mus musculus GN=Kif11 PE=2 SV=1 Back     alignment and function description
>sp|P27895|CIN8_YEAST Kinesin-like protein CIN8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CIN8 PE=1 SV=3 Back     alignment and function description
>sp|B2GU58|KIF11_XENTR Kinesin-like protein KIF11 OS=Xenopus tropicalis GN=kif11 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query745
297735041 973 unnamed protein product [Vitis vinifera] 0.877 0.672 0.472 1e-173
359476842 960 PREDICTED: uncharacterized protein LOC10 0.860 0.667 0.475 1e-171
356495368 966 PREDICTED: uncharacterized protein LOC10 0.906 0.698 0.460 1e-163
255581406 959 conserved hypothetical protein [Ricinus 0.900 0.699 0.459 1e-160
356561169 937 PREDICTED: uncharacterized protein LOC10 0.848 0.674 0.451 1e-158
357483693 963 Kinesin-related protein [Medicago trunca 0.867 0.670 0.446 1e-155
356502134 949 PREDICTED: uncharacterized protein LOC10 0.860 0.675 0.441 1e-155
356540801 953 PREDICTED: uncharacterized protein LOC10 0.891 0.696 0.453 1e-155
449500027 992 PREDICTED: uncharacterized LOC101218717 0.893 0.671 0.456 1e-153
449457642 1000 PREDICTED: uncharacterized protein LOC10 0.903 0.673 0.454 1e-152
>gi|297735041|emb|CBI17403.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score =  616 bits (1588), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 355/751 (47%), Positives = 470/751 (62%), Gaps = 97/751 (12%)

Query: 5   SKGRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTT 64
           SKGR+GH+P+RDSKLTRILQSSLGGNA+TAIICT+SPARSHVEQSRNTLLFASCAKEVTT
Sbjct: 286 SKGRSGHIPYRDSKLTRILQSSLGGNAKTAIICTMSPARSHVEQSRNTLLFASCAKEVTT 345

Query: 65  NAQVNIVMSDKALVKHLQRELSRLENELRGSGPVFITPDSVSVLREKDLRIEKLEKEVDE 124
           NAQVN+VMSDKALVKHLQREL+RLEN LR   P  I  D+ ++LR+KDL+IEKLEKE+ E
Sbjct: 346 NAQVNVVMSDKALVKHLQRELARLENSLRSPEPTSICLDTATLLRDKDLQIEKLEKELRE 405

Query: 125 LTMQRDLARTEVENLLRGAGKGSAESPPVVYVDDRPPVVYAGLDHQYPRLRVRSSWDFEN 184
           LT+QRDLA+++VE+LL   G            DDR P+++A +D  YP+LRVR SW+ EN
Sbjct: 406 LTLQRDLAQSQVEDLLGVVG------------DDRLPMIWADMDDHYPKLRVRRSWESEN 453

Query: 185 LNIET----QNMIP------------HCIDISVRSSDTSPCSDGHS--SSDENFFPLPSL 226
              ET     +  P               D+ +R+ DTS  SDG+S   SD+++ PLP  
Sbjct: 454 PTSETFALADDQTPASGLRTFALADDQTPDVGLRTCDTSQYSDGNSVDDSDDHYPPLPES 513

Query: 227 EENILKTKCNEQDEVSVPSFVGTDL--HQEEIEEQNDENA-DVYKNVGCVQMGKGTTGYT 283
           E+N L    +    V+ P+ V  DL    ++IEEQ++ N+ D+ K V C+++ + +    
Sbjct: 514 EDNFLHNGTSALVSVNTPNHVAIDLSSQWDKIEEQSNANSEDLCKEVRCIEI-EHSIMKR 572

Query: 284 DLKKSEPSLNKDRDLNMTSVDINPATSGVAETEDEDEQCGESRSTTLKEQNELNNIILNS 343
           D++ +  S  +D D    ++++    +G       D    E  S  LKE  ELN      
Sbjct: 573 DIESNTLSPVRDTD----ALELKVVRNG-------DGANQEFTSPLLKEDKELNCNQRTV 621

Query: 344 VTPSTVEPSPWRPEKYTPTPSILNLTRSRSCKACLMTSYSPDWFENDEKVVSTPPIVFEK 403
           V PS  E SPW  EK   +   L LTRSRSCKA  M   S  WFE +EK   TP  VFEK
Sbjct: 622 VIPSPQEFSPWLLEKENSSCRSLKLTRSRSCKASFMYCSSSPWFEKEEKDKYTPSNVFEK 681

Query: 404 DFTGRPRGLEIKVSALKYAADTEISSTNESQTSARSSSFDDLKSQNVVTPEVAENIGTSA 463
           DF GRP G + K+++L Y  + +  S    QT   SSS D LK Q VVT    E++    
Sbjct: 682 DFIGRPEGFQKKLASLNYDTEIDKLSRKGGQTFRGSSSVDQLKEQ-VVTTSTDEDV---- 736

Query: 464 RSSTLDIKSQNVKAPDDAENTRNSARSPAFADLKSRNNKTPGAAESTSESISVAQMVEMT 523
                                                         TS +  VA + EM 
Sbjct: 737 ----------------------------------------------TSLNTYVAGLKEMA 750

Query: 524 EPRNEMQPADNVDTLLKSGVPAKSVRDIGVDNIQEDFINHWEWPLEFKRLQREIIELWHA 583
           + + E + AD+ ++  ++    K+V+D+G+D IQ+D  +   WP EFKRLQ+EIIELWH+
Sbjct: 751 KFQYEERLADDQESEPEANKSVKNVKDVGLDPIQDDLASPSRWPFEFKRLQKEIIELWHS 810

Query: 584 CNVSLVHRTYFFLLFKGDPKDSIYMEVEQRRLSFLKDSFSRGNDAIEDGRTVSLASSMKA 643
           CNVSLVHRTYFFLLF+GDP DSIYMEVE RRLSFLKD+FSRGN  + DG  ++ ASS++A
Sbjct: 811 CNVSLVHRTYFFLLFQGDPADSIYMEVELRRLSFLKDTFSRGNQTVVDGHALTPASSVRA 870

Query: 644 LRRERHMLSQHVKKRFSREQRENLFLKWGIGLQTKHRSLQLAHLLWT-SKDLNHVAESAA 702
           LRRER ML + ++K+ S ++R +LFLKWG+ L  K+R LQLA+ LWT ++D+NH++ESA 
Sbjct: 871 LRREREMLCKQMQKKLSEDERMSLFLKWGVQLNAKNRRLQLAYRLWTDTEDMNHISESAN 930

Query: 703 IVSKLVTFVKPDQAFREMFGLNFAPRRPNKK 733
           IV++L  FV+P++AF+EMFGLNF PRR +++
Sbjct: 931 IVARLTRFVQPEEAFKEMFGLNFTPRRMSRR 961

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359476842|ref|XP_003631897.1| PREDICTED: uncharacterized protein LOC100854194 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356495368|ref|XP_003516550.1| PREDICTED: uncharacterized protein LOC100809766 [Glycine max] Back     alignment and taxonomy information
>gi|255581406|ref|XP_002531511.1| conserved hypothetical protein [Ricinus communis] gi|223528864|gb|EEF30865.1| conserved hypothetical protein [Ricinus communis] Back     alignment and taxonomy information
>gi|356561169|ref|XP_003548857.1| PREDICTED: uncharacterized protein LOC100775190 [Glycine max] Back     alignment and taxonomy information
>gi|357483693|ref|XP_003612133.1| Kinesin-related protein [Medicago truncatula] gi|355513468|gb|AES95091.1| Kinesin-related protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|356502134|ref|XP_003519876.1| PREDICTED: uncharacterized protein LOC100785401 [Glycine max] Back     alignment and taxonomy information
>gi|356540801|ref|XP_003538873.1| PREDICTED: uncharacterized protein LOC100802226 [Glycine max] Back     alignment and taxonomy information
>gi|449500027|ref|XP_004160983.1| PREDICTED: uncharacterized LOC101218717 [Cucumis sativus] Back     alignment and taxonomy information
>gi|449457642|ref|XP_004146557.1| PREDICTED: uncharacterized protein LOC101218717 [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query745
TAIR|locus:2050115862 AT2G21300 [Arabidopsis thalian 0.268 0.232 0.524 5.5e-102
TAIR|locus:2120272836 AT4G38950 [Arabidopsis thalian 0.340 0.303 0.432 2.1e-88
TAIR|locus:21350061004 AT4G24170 [Arabidopsis thalian 0.914 0.678 0.344 6.4e-83
TAIR|locus:2014069974 HIK "HINKEL" [Arabidopsis thal 0.459 0.351 0.346 7.8e-73
UNIPROTKB|Q8S950959 nack1 "Kinesin-like protein NA 0.166 0.129 0.664 5.5e-72
TAIR|locus:2084701938 TES "TETRASPORE" [Arabidopsis 0.191 0.152 0.574 1.5e-65
TAIR|locus:21550511063 AT5G66310 [Arabidopsis thalian 0.610 0.428 0.368 2.7e-55
TAIR|locus:21623511087 AT5G42490 [Arabidopsis thalian 0.797 0.546 0.278 1.2e-47
TAIR|locus:2202862823 ZCF125 [Arabidopsis thaliana ( 0.153 0.138 0.435 1.4e-18
DICTYBASE|DDB_G0291039685 kif11 "kinesin-7" [Dictyosteli 0.177 0.192 0.424 1.7e-18
TAIR|locus:2050115 AT2G21300 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 519 (187.8 bits), Expect = 5.5e-102, Sum P(4) = 5.5e-102
 Identities = 106/202 (52%), Positives = 144/202 (71%)

Query:   546 KSVRDIGVDNIQEDFINHW-EWPLEFKRLQREIIELWHACNVSLVHRTYFFLLFKGDPKD 604
             K  +DIGVD ++E+       W  EF+R + +I+ LW  C+VSLVHRTYFFLLF GD  D
Sbjct:   660 KMRKDIGVDAMEEEVSGTMTNWSEEFERQREQILGLWQTCHVSLVHRTYFFLLFTGDQAD 719

Query:   605 SIYMEVEQRRLSFLKDSFSRGNDAIEDGRTVSLASSMKALRRERHMLSQHVKKRFSREQR 664
             SIY+ VE RRLSF+K+SFS+GN A E G+T+++ASS+KAL RER MLS+ V KRF+ E+R
Sbjct:   720 SIYIGVELRRLSFMKESFSQGNHAFERGQTLTIASSLKALHRERRMLSKLVGKRFTGEER 779

Query:   665 ENLFLKWGIGLQTKHRSLQLAHLLWTS-KDLNHVAESAAIVSKLVTFVKPDQAFREMFGL 723
             + L+ K+GI + +K R LQLA+ LW+   D+ H  ESAA+V+KLV FV+  +A +EMFGL
Sbjct:   780 KRLYQKFGIAVNSKRRRLQLANQLWSKPNDITHAVESAAVVAKLVRFVEQGRAMKEMFGL 839

Query:   724 NFAPRRPNKKFSLLKRSVISIL 745
             +F P  P  + SL  R  ++ L
Sbjct:   840 SFTPPLPTTRRSLNWRKSMATL 861
GO:0003777 "microtubule motor activity" evidence=IEA;ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0007018 "microtubule-based movement" evidence=IEA
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2120272 AT4G38950 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2135006 AT4G24170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014069 HIK "HINKEL" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|Q8S950 nack1 "Kinesin-like protein NACK1" [Nicotiana tabacum (taxid:4097)] Back     alignment and assigned GO terms
TAIR|locus:2084701 TES "TETRASPORE" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2155051 AT5G66310 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2162351 AT5G42490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202862 ZCF125 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0291039 kif11 "kinesin-7" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query745
pfam11995162 pfam11995, DUF3490, Domain of unknown function (DU 4e-88
cd01374321 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E 2e-26
smart00129335 smart00129, KISc, Kinesin motor, catalytic domain 1e-23
pfam00225326 pfam00225, Kinesin, Kinesin motor domain 1e-22
cd00106328 cd00106, KISc, Kinesin motor domain 1e-17
cd01364352 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC 4e-17
cd01365356 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K 2e-16
cd01372341 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik 4e-16
cd01370338 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP 8e-16
cd01369325 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine 1e-15
PLN03188 1320 PLN03188, PLN03188, kinesin-12 family protein; Pro 3e-14
cd01366329 cd01366, KISc_C_terminal, Kinesin motor domain, KI 9e-14
COG5059568 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] 9e-14
cd01371333 cd01371, KISc_KIF3, Kinesin motor domain, kinesins 6e-13
cd01373337 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP 2e-12
cd01376319 cd01376, KISc_KID_like, Kinesin motor domain, KIF2 8e-11
cd01367322 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF 9e-11
cd01375334 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF 9e-09
cd01363186 cd01363, Motor_domain, Myosin and Kinesin motor do 2e-06
cd01368345 cd01368, KISc_KIF23_like, Kinesin motor domain, KI 6e-05
>gnl|CDD|221365 pfam11995, DUF3490, Domain of unknown function (DUF3490) Back     alignment and domain information 
 Score =  273 bits (701), Expect = 4e-88
 Identities = 107/162 (66%), Positives = 131/162 (80%), Gaps = 1/162 (0%)

Query: 569 EFKRLQREIIELWHACNVSLVHRTYFFLLFKGDPKDSIYMEVEQRRLSFLKDSFSRGNDA 628
           EF+R Q++IIELWH CNVSLVHRTYFFLLFKGDP D IYMEVE RRLSFLK SFS+G  A
Sbjct: 1   EFERQQQQIIELWHTCNVSLVHRTYFFLLFKGDPADQIYMEVELRRLSFLKQSFSQGGPA 60

Query: 629 IEDGRTVSLASSMKALRRERHMLSQHVKKRFSREQRENLFLKWGIGLQTKHRSLQLAHLL 688
           +E GRT+SLASS+KAL RER MLS+ ++KR ++E+RE L+ KWG+ L +K R LQLA+ L
Sbjct: 61  LEGGRTLSLASSIKALTREREMLSKLMQKRLTKEERERLYQKWGVPLNSKRRRLQLANKL 120

Query: 689 WT-SKDLNHVAESAAIVSKLVTFVKPDQAFREMFGLNFAPRR 729
           W+  KD+ HV ESA++V+KLV FV+   A +EMFGLNFAP  
Sbjct: 121 WSNPKDMEHVRESASLVAKLVGFVEQGLASKEMFGLNFAPPS 162

This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is about 160 amino acids in length. This domain is found associated with pfam00225. This domain is found associated with pfam00225. This domain has two conserved sequence motifs: EVE and ESA. Length = 162
>gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis Back     alignment and domain information
>gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain Back     alignment and domain information
>gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain Back     alignment and domain information
>gnl|CDD|238054 cd00106, KISc, Kinesin motor domain Back     alignment and domain information
>gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division Back     alignment and domain information
>gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins Back     alignment and domain information
>gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily Back     alignment and domain information
>gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup Back     alignment and domain information
>gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup Back     alignment and domain information
>gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional Back     alignment and domain information
>gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins Back     alignment and domain information
>gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins Back     alignment and domain information
>gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup Back     alignment and domain information
>gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup Back     alignment and domain information
>gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group Back     alignment and domain information
>gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling Back     alignment and domain information
>gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain Back     alignment and domain information
>gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 745
PF11995161 DUF3490: Domain of unknown function (DUF3490); Int 100.0
KOG0245 1221 consensus Kinesin-like protein [Cytoskeleton] 99.94
KOG02431041 consensus Kinesin-like protein [Cytoskeleton] 99.93
KOG0241 1714 consensus Kinesin-like protein [Cytoskeleton] 99.92
KOG4280574 consensus Kinesin-like protein [Cytoskeleton] 99.9
KOG0242675 consensus Kinesin-like protein [Cytoskeleton] 99.9
KOG0240607 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] 99.84
PLN03188 1320 kinesin-12 family protein; Provisional 99.81
KOG0244913 consensus Kinesin-like protein [Cytoskeleton] 99.8
cd01373337 KISc_KLP2_like Kinesin motor domain, KLP2-like sub 99.68
cd01364352 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind 99.67
cd01370338 KISc_KIP3_like Kinesin motor domain, KIP3-like sub 99.66
cd01365356 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p 99.65
cd01369325 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy 99.61
cd01371333 KISc_KIF3 Kinesin motor domain, kinesins II or KIF 99.61
cd01368345 KISc_KIF23_like Kinesin motor domain, KIF23-like s 99.61
cd01372341 KISc_KIF4 Kinesin motor domain, KIF4-like subfamil 99.59
cd01374321 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like 99.57
COG5059568 KIP1 Kinesin-like protein [Cytoskeleton] 99.57
cd01375334 KISc_KIF9_like Kinesin motor domain, KIF9-like sub 99.56
PF00225335 Kinesin: Kinesin motor domain; InterPro: IPR001752 99.56
cd01366329 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ 99.55
smart00129335 KISc Kinesin motor, catalytic domain. ATPase. Micr 99.55
cd01376319 KISc_KID_like Kinesin motor domain, KIF22/Kid-like 99.53
cd01367322 KISc_KIF2_like Kinesin motor domain, KIF2-like gro 99.53
cd00106328 KISc Kinesin motor domain. This catalytic (head) d 99.43
KOG0246676 consensus Kinesin-like protein [Cytoskeleton] 99.41
KOG0239670 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] 99.39
KOG0247809 consensus Kinesin-like protein [Cytoskeleton] 99.15
PRK10884206 SH3 domain-containing protein; Provisional 91.42
>PF11995 DUF3490: Domain of unknown function (DUF3490); InterPro: IPR021881 This presumed domain is functionally uncharacterised Back     alignment and domain information 
Probab=100.00  E-value=3.1e-90  Score=658.95  Aligned_cols=160  Identities=69%  Similarity=1.121  Sum_probs=158.3

Q ss_pred             HHHHHHHHHHHHhhhccccceehhheeeeecCCCCCceEEEEeehhhhhhHHhhhcCCCCCCCCccccHHHHHHHHHHHH
Q 004556          569 EFKRLQREIIELWHACNVSLVHRTYFFLLFKGDPKDSIYMEVEQRRLSFLKDSFSRGNDAIEDGRTVSLASSMKALRRER  648 (745)
Q Consensus       569 ~F~~~q~eIieLW~~C~VslvHRTyFfLLFkGd~~D~iYmEVE~RRLs~lk~~~~~g~~~~~~~~~~s~~SS~kaL~rER  648 (745)
                      +||+||++||||||+|||||||||||||||||||+|+||||||+|||+|||++|++|+++++|++++|++||+|||+|||
T Consensus         1 ~Fe~qq~~IIeLW~~C~VsLvHRTyFfLLFkGdpaD~iYmEVElRRLs~Lk~~fs~~~~~~~~~~~~s~~sS~kaL~rER   80 (161)
T PF11995_consen    1 EFERQQQEIIELWHACNVSLVHRTYFFLLFKGDPADSIYMEVELRRLSFLKETFSEGGQAAGGGHTLSLASSIKALRRER   80 (161)
T ss_pred             ChHHHHHHHHHHHHhcCcchhhhhhhhheecCCcccceEEEeehHHHHHHHHHhccCCcccCCCCcccHHHHHHHHHHHH
Confidence            59999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcCHHHHHHHHHhhCcCCCCcchhHHHHhhcCCcc-chhHHHHHHHHHHHHhhccCCChhhhhhhcccccC
Q 004556          649 HMLSQHVKKRFSREQRENLFLKWGIGLQTKHRSLQLAHLLWTSK-DLNHVAESAAIVSKLVTFVKPDQAFREMFGLNFAP  727 (745)
Q Consensus       649 emL~k~m~krls~eERe~ly~KWgI~l~sK~RrLQla~rLWt~t-dm~HVrESA~lVAKLvgf~e~g~a~kEMFgLnF~~  727 (745)
                      +||||||++||+.+|||+||.||||+|+||||||||||+|||+| ||+||+|||+||||||||||||+|+||||||||+|
T Consensus        81 ~~L~k~m~~rls~eere~ly~kWgI~l~sK~RrlQL~~~LWt~~~d~~Hv~eSA~lVAkLvgf~e~g~~~KEMFgLnF~~  160 (161)
T PF11995_consen   81 EMLAKQMQKRLSREEREELYKKWGIPLDSKQRRLQLANRLWTDTKDMEHVRESAELVAKLVGFVEPGQASKEMFGLNFTP  160 (161)
T ss_pred             HHHHHHHHHhCCHHHHHHHHHhcCCCCcchHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhhccccccHHHHHccCCCC
Confidence            99999999999999999999999999999999999999999999 99999999999999999999999999999999998


Q ss_pred             C
Q 004556          728 R  728 (745)
Q Consensus       728 ~  728 (745)
                      |
T Consensus       161 ~  161 (161)
T PF11995_consen  161 P  161 (161)
T ss_pred             C
Confidence            6

This domain is found in eukaryotes. This domain is about 160 amino acids in length. This domain is found associated with PF00225 from PFAM. This domain is found associated with PF00225 from PFAM. This domain has two conserved sequence motifs: EVE and ESA.
>KOG0245 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG0243 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG0241 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG4280 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG0242 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] Back     alignment and domain information
>PLN03188 kinesin-12 family protein; Provisional Back     alignment and domain information
>KOG0244 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup Back     alignment and domain information
>cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division Back     alignment and domain information
>cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup Back     alignment and domain information
>cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins Back     alignment and domain information
>cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup Back     alignment and domain information
>cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins Back     alignment and domain information
>cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup Back     alignment and domain information
>cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily Back     alignment and domain information
>cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis Back     alignment and domain information
>COG5059 KIP1 Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling Back     alignment and domain information
>PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport Back     alignment and domain information
>cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins Back     alignment and domain information
>smart00129 KISc Kinesin motor, catalytic domain Back     alignment and domain information
>cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup Back     alignment and domain information
>cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group Back     alignment and domain information
>cd00106 KISc Kinesin motor domain Back     alignment and domain information
>KOG0246 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] Back     alignment and domain information
>KOG0247 consensus Kinesin-like protein [Cytoskeleton] Back     alignment and domain information
>PRK10884 SH3 domain-containing protein; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query745
3b6u_A372 Crystal Structure Of The Motor Domain Of Human Kine 4e-12
3b6v_A395 Crystal Structure Of The Motor Domain Of Human Kine 5e-12
4aqv_C373 Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma 7e-12
1goj_A355 Structure Of A Fast Kinesin: Implications For Atpas 7e-12
4a28_A368 Eg5-2 Length = 368 1e-11
4ap0_A370 The Mitotic Kinesin Eg5 In Complex With Mg-Adp And 1e-11
3hqd_A369 Human Kinesin Eg5 Motor Domain In Complex With Ampp 1e-11
4a1z_A368 Eg5-1 Length = 368 1e-11
1ii6_A368 Crystal Structure Of The Mitotic Kinesin Eg5 In Com 1e-11
1q0b_A367 Crystal Structure Of The Motor Protein Ksp In Compl 1e-11
1x88_A359 Human Eg5 Motor Domain Bound To Mg-Adp And Monastro 1e-11
3kin_B117 Kinesin (Dimeric) From Rattus Norvegicus Length = 1 2e-11
2y5w_A365 Crystal Structure Of Drosophila Melanogaster Kinesi 5e-11
2wbe_C373 Kinesin-5-Tubulin Complex With Amppnp Length = 373 8e-11
3zcw_A348 Eg5 - New Allosteric Binding Site Length = 348 1e-10
4atx_C340 Rigor Kinesin Motor Domain With An Ordered Neck-Lin 1e-10
1mkj_A349 Human Kinesin Motor Domain With Docked Neck Linker 1e-10
1t5c_A349 Crystal Structure Of The Motor Domain Of Human Kine 2e-10
2vvg_A350 Crystal Structure Of The G.Intestinalis Kinesin 2 G 4e-10
4a14_A344 Human Kif7, A Kinesin Involved In Hedgehog Signalli 6e-10
2kin_B100 Kinesin (Monomeric) From Rattus Norvegicus Length = 9e-10
1bg2_A325 Human Ubiquitous Kinesin Motor Domain Length = 325 1e-09
3lre_A355 Crystal Structure Analysis Of Human Kinesin-8 Motor 1e-09
1sdm_A369 Crystal Structure Of Kinesin-Like Calmodulin Bindin 3e-09
3h4s_A386 Structure Of The Complex Of A Mitotic Kinesin With 4e-09
2xt3_A344 Human Kif7, A Kinesin Involved In Hedgehog Signalli 6e-09
1ia0_K394 Kif1a Head-Microtubule Complex Structure In Atp-For 4e-08
4etp_A403 C-Terminal Motor And Motor Homology Domain Of Kar3v 4e-08
3gbj_A354 Crystal Structure Of The Motor Domain Of Kinesin Ki 4e-08
3kar_A346 The Motor Domain Of Kinesin-Like Protein Kar3, A Sa 7e-08
1f9v_A347 Crystal Structures Of Mutants Reveal A Signalling P 7e-08
1f9u_A347 Crystal Structures Of Mutants Reveal A Signalling P 7e-08
1f9w_A347 Crystal Structures Of Mutants Reveal A Signalling P 7e-08
1vfv_A366 Crystal Structure Of The Kif1a Motor Domain Complex 7e-08
1f9t_A358 Crystal Structures Of Kinesin Mutants Reveal A Sign 7e-08
1i5s_A367 Crystal Structure Of The Kif1a Motor Domain Complex 7e-08
3bfn_A388 Crystal Structure Of The Motor Domain Of Human Kine 7e-08
1i6i_A366 Crystal Structure Of The Kif1a Motor Domain Complex 8e-08
2owm_A443 Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3 1e-07
4gkr_A371 Structure Of The C-Terminal Motor Domain Of Kar3 Fr 3e-07
2gry_A420 Crystal Structure Of The Human Kif2 Motor Domain In 7e-07
2rep_A376 Crystal Structure Of The Motor Domain Of Human Kine 8e-07
2h58_A330 Crystal Structure Of The Kifc3 Motor Domain In Comp 9e-07
2heh_A387 Crystal Structure Of The Kif2c Motor Domain (Casp T 1e-06
4h1g_A715 Structure Of Candida Albicans Kar3 Motor Domain Fus 2e-06
1v8j_A410 The Crystal Structure Of The Minimal Functional Dom 3e-06
3edl_D331 Kinesin13-Microtubule Ring Complex Length = 331 4e-06
1ry6_A360 Crystal Structure Of Internal Kinesin Motor Domain 1e-05
3l1c_A383 Kinesin-14 Protein Ncd, T436s Mutant Length = 383 2e-05
1cz7_A406 The Crystal Structure Of A Minus-End Directed Micro 2e-05
3u06_A412 Crystal Structure Of The Kinesin-14 Ncdg347d Length 2e-05
1n6m_A409 Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY 2e-05
2ncd_A420 Ncd (Non-Claret Disjunctional) Dimer From D. Melano 2e-05
3t0q_A349 Motor Domain Structure Of The Kar3-Like Kinesin Fro 2e-05
3nwn_A359 Crystal Structure Of The Human Kif9 Motor Domain In 4e-04
>pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372 Back     alignment and structure 
Iteration: 1

 Score = 70.5 bits (171), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
Query: 7   GRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNA 66
           G++ H+P+RDSKLTR+LQ SLGGNA+T ++  + PA  +VE++  TL +A+ AK +    
Sbjct: 298 GKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASYNVEETLTTLRYANRAKNIKNKP 357
Query: 67  QVNIVMSDKALVKHLQ 82
           +VN    D AL++  Q
Sbjct: 358 RVNEDPKD-ALLREFQ 372
>pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 Back     alignment and structure
>pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373 Back     alignment and structure
>pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355 Back     alignment and structure
>pdb|4A28|A Chain A, Eg5-2 Length = 368 Back     alignment and structure
>pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370 Back     alignment and structure
>pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369 Back     alignment and structure
>pdb|4A1Z|A Chain A, Eg5-1 Length = 368 Back     alignment and structure
>pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368 Back     alignment and structure
>pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367 Back     alignment and structure
>pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359 Back     alignment and structure
>pdb|3KIN|B Chain B, Kinesin (Dimeric) From Rattus Norvegicus Length = 117 Back     alignment and structure
>pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365 Back     alignment and structure
>pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373 Back     alignment and structure
>pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348 Back     alignment and structure
>pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340 Back     alignment and structure
>pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349 Back     alignment and structure
>pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349 Back     alignment and structure
>pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350 Back     alignment and structure
>pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 Back     alignment and structure
>pdb|2KIN|B Chain B, Kinesin (Monomeric) From Rattus Norvegicus Length = 100 Back     alignment and structure
>pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325 Back     alignment and structure
>pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355 Back     alignment and structure
>pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369 Back     alignment and structure
>pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386 Back     alignment and structure
>pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 Back     alignment and structure
>pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394 Back     alignment and structure
>pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403 Back     alignment and structure
>pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354 Back     alignment and structure
>pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346 Back     alignment and structure
>pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 Back     alignment and structure
>pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 Back     alignment and structure
>pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 Back     alignment and structure
>pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366 Back     alignment and structure
>pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358 Back     alignment and structure
>pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367 Back     alignment and structure
>pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388 Back     alignment and structure
>pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366 Back     alignment and structure
>pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443 Back     alignment and structure
>pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371 Back     alignment and structure
>pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420 Back     alignment and structure
>pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376 Back     alignment and structure
>pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330 Back     alignment and structure
>pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387 Back     alignment and structure
>pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715 Back     alignment and structure
>pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410 Back     alignment and structure
>pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331 Back     alignment and structure
>pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360 Back     alignment and structure
>pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383 Back     alignment and structure
>pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406 Back     alignment and structure
>pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412 Back     alignment and structure
>pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409 Back     alignment and structure
>pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420 Back     alignment and structure
>pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349 Back     alignment and structure
>pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query745
1t5c_A349 CENP-E protein, centromeric protein E; kinesin mot 2e-31
3kin_B117 Kinesin heavy chain; motor protein, cytoskeleton; 1e-29
2kin_B100 Kinesin; motor protein, cytoskeleton; HET: ADP; 2. 9e-28
2y65_A365 Kinesin, kinesin heavy chain; motor protein; HET: 1e-27
1goj_A355 Kinesin, kinesin heavy chain; motor protein, ATPas 4e-25
3b6u_A372 Kinesin-like protein KIF3B; structural genomics co 2e-23
3bfn_A388 Kinesin-like protein KIF22; limited proteolysis, s 2e-23
3cob_A369 Kinesin heavy chain-like protein; motor, switch II 6e-23
1ry6_A360 Internal kinesin; kinesin motor domain, nucleotide 7e-22
2vvg_A350 Kinesin-2; motor protein, nucleotide-binding, micr 1e-21
2wbe_C373 Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit 3e-21
2zfi_A366 Kinesin-like protein KIF1A, kinesin heavy chain is 6e-21
3u06_A412 Protein claret segregational; motor domain, stalk 1e-20
4a14_A344 Kinesin, kinesin-like protein KIF7; motor protein, 1e-20
2nr8_A358 Kinesin-like protein KIF9; motor domain, ADP, stru 1e-20
1x88_A359 Kinesin-like protein KIF11; switch II, motor domai 1e-20
3dc4_A344 Kinesin-like protein NOD; catalytic domain, ATPase 3e-20
3lre_A355 Kinesin-like protein KIF18A; motor protein, nucleo 7e-20
2owm_A443 Nckin3-434, related to kinesin-like protein KIF1C; 9e-20
1bg2_A325 Kinesin; motor protein, ATPase, microtubule associ 1e-19
3gbj_A354 KIF13B protein; kinesin, motor domain, ADP, struct 3e-19
1v8k_A410 Kinesin-like protein KIF2C; microtubule destabiliz 7e-19
1f9v_A347 Kinesin-like protein KAR3; kinesin-related protein 2e-18
2h58_A330 Kinesin-like protein KIFC3 variant; motor domain, 3e-18
2heh_A387 KIF2C protein; kinesin, motor domain, ADP, structu 6e-18
4etp_A403 Kinesin-like protein KAR3; kinesin motor protein, 9e-18
2rep_A376 Kinesin-like protein KIFC1; structural genomics co 1e-17
3t0q_A349 AGR253WP; kinesin, alpha and beta proteins, P-loop 2e-17
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349 Back     alignment and structure
 Score =  124 bits (315), Expect = 2e-31
 Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 2/75 (2%)

Query: 8   RNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQ 67
             G + +RDSKLTRILQ+SLGGNA+T IICT++P     +++   L FAS AK +     
Sbjct: 276 VGGFINYRDSKLTRILQNSLGGNAKTRIICTITPV--SFDETLTALQFASTAKYMKNTPY 333

Query: 68  VNIVMSDKALVKHLQ 82
           VN V +D+    H  
Sbjct: 334 VNEVSTDELEHHHHH 348
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117 Back     alignment and structure
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100 Back     alignment and structure
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 Back     alignment and structure
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 Back     alignment and structure
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 Back     alignment and structure
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 Back     alignment and structure
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369 Back     alignment and structure
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360 Back     alignment and structure
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 Back     alignment and structure
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 Back     alignment and structure
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 Back     alignment and structure
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412 Back     alignment and structure
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 Back     alignment and structure
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 Back     alignment and structure
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 Back     alignment and structure
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 Back     alignment and structure
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443 Back     alignment and structure
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 Back     alignment and structure
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 Back     alignment and structure
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 Back     alignment and structure
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347 Back     alignment and structure
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330 Back     alignment and structure
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 Back     alignment and structure
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403 Back     alignment and structure
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376 Back     alignment and structure
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 745
d1goja_354 c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5 3e-23
d1sdma_364 c.37.1.9 (A:) Kinesin heavy chain-like protein {Po 6e-22
d1f9va_342 c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun 7e-21
d1bg2a_323 c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId 2e-20
d2zfia1349 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), 2e-20
d1ry6a_330 c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu 6e-20
d2ncda_368 c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun 6e-20
d1x88a1345 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), 7e-20
d1v8ka_362 c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c 4e-19
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin
species: Neurospora crassa [TaxId: 5141]

 Score = 99.6 bits (247), Expect = 3e-23
 Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 4/85 (4%)

Query: 7   GRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNA 66
           G++ HVP+RDSKLTRILQ SLGGN+RT +I   SP+  +  ++ +TL F   AK +   A
Sbjct: 274 GKSSHVPYRDSKLTRILQESLGGNSRTTLIINCSPSSYNDAETLSTLRFGMRAKSIKNKA 333

Query: 67  QVNIVMSDKALVKHLQRELSRLENE 91
           +VN  +S       L++ L++ + +
Sbjct: 334 KVNAELSPAE----LKQMLAKAKTQ 354
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364 Back     information, alignment and structure
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342 Back     information, alignment and structure
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323 Back     information, alignment and structure
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349 Back     information, alignment and structure
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330 Back     information, alignment and structure
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368 Back     information, alignment and structure
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345 Back     information, alignment and structure
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query745
d1sdma_364 Kinesin heavy chain-like protein {Potato (Solanum 99.86
d1goja_354 Kinesin {Neurospora crassa [TaxId: 5141]} 99.81
d1x88a1345 Kinesin {Human (Homo sapiens), mitotic kinesin eg5 99.76
d1v8ka_362 Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 99.75
d1f9va_342 Kinesin motor Ncd (non-claret disjunctional) {Bake 99.73
d2ncda_368 Kinesin motor Ncd (non-claret disjunctional) {Frui 99.73
d1ry6a_330 Kinesin {Malaria parasite (Plasmodium falciparum) 99.73
d1bg2a_323 Kinesin {Human (Homo sapiens) [TaxId: 9606]} 99.7
d2zfia1349 Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 99.7
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Kinesin heavy chain-like protein
species: Potato (Solanum tuberosum) [TaxId: 4113]

Probab=99.86  E-value=3e-23  Score=177.56  Aligned_cols=90  Identities=31%  Similarity=0.561  Sum_probs=79.8

Q ss_pred             CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             96545899987568887011015345699875308993289976569889899969873144233200233699999999
Q 004556            1 MVECSKGRNGHVPFRDSKLTRILQSSLGGNARTAIICTLSPARSHVEQSRNTLLFASCAKEVTTNAQVNIVMSDKALVKH   80 (745)
Q Consensus         1 I~ALskGk~~HIPYRDSKLTRLLQdSLGGNSKT~MI~tISPs~s~~eETlsTLrFAsRAK~Ikn~a~vN~v~sdkalIkq   80 (745)
                      |.||+.+ ..||||||||||+|||++|||||+|+|||||||+..+++||++||+||++||.|+|.|.+|+...   .+.+
T Consensus       262 i~aL~~~-~~~ipyR~SkLT~lL~d~Lggns~t~~I~~isp~~~~~~eTl~TL~fa~~ak~i~n~p~~n~~~~---~~~~  337 (364)
T d1sdma_         262 ISALSSG-NQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVSSK---EVAR  337 (364)
T ss_dssp             HHHHHHT-CSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHHHHHHHHHHHHTTCCCCCCCCEECH---HHHH
T ss_pred             HHHHHCC-CCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH---HHHH
T ss_conf             9999749-97577301121388786349995099999969870018999999999999842066783557989---9999


Q ss_pred             HHHHHHHHHHHHHC
Q ss_conf             99999999999853
Q 004556           81 LQRELSRLENELRG   94 (745)
Q Consensus        81 Lq~EIarLk~EL~s   94 (745)
                      |+++++.|+.++..
T Consensus       338 l~~~i~~l~~~~~~  351 (364)
T d1sdma_         338 LKKLVSYWKEQAGR  351 (364)
T ss_dssp             HHTTTTCC------
T ss_pred             HHHHHHHHHHHHHH
T ss_conf             99999999999874
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Back     information, alignment and structure
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Back     information, alignment and structure
>d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Back     information, alignment and structure
>d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Back     information, alignment and structure
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Back     information, alignment and structure