Citrus Sinensis ID: 004562

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-----
MESPLPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPETIVFSLLPQVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI
cccccccccEEcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccccccccccccccccccccEEEEccccccccHHHHHHHHHHHHcccccccccEEEEEcccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHccccccHHHHccccccccEEEEEEEcccccccccccccHHHHHHHHHcccccccEEEEccccccccccHHHHHHccccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHcccccEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHEEcc
ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHccccccccccEEEEEcccccccccEEEHHHHHHHHHccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEccccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHccccccccEEEEEccccccccccccccccccEEEEEEEccccccccccEEEccccHEEEEEEcccccccccccccccccccccHHHHccccHHHHcccccccccHHHHHHHHHHHHccccccccccccEEEEEEcccccHEHcccHEcccccEEEEEccccccccccccccHHHHHHHHHHHHHccEEEEEcccccEEEccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccEEEEcHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccHHHHHHHHEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHc
mesplplhvchvNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRaylwrpvsrtvfperlpeddklpaidvfictadpekeptfgVMNTVLSAMaldypvdklhvylsddggspitLRGMREAFRFAKWwipfcrryrikticpqayfseaesdenfgdsefvtEKRKIKEKYEMFEEQVMKAVedgeygnsrnhSTIIEIIqdtsgenetiRQADLVEMPLLVYvsrekspehlhhfkGGALNVLLRVSgvisnspyilgldcdmycndptsarqamcfhldpktssslafvqfpqkfhnfnehdiydgslrsgyrlqwpgmdglkgpfltgtghyirreslygnfkhkgidlaelkdtfgesNLFIKSLHQSYehknvngenlSNVLQQETEVLASCSYEhqtkwgeevgFSYQSVSEDFFTGFILHckgwtstyldpsrpqflgtsttnLNDVLIQGTRWASGLIDVSisrfcpllygpsrMSLLLSMCygemslfpllyclplwcfatlpqlcllngiplypetivfsllpqvsspffMVFSFIFLSAICKHLQEVIStggsvytwrnEQRIWMIKSVTSHFYGSMDAIMKLLGLrkasflptnkvldneqvkryemgqfdfqtssvFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIvrkdkgrispsaiLLSSVFFVTFLFFGSIILI
MESPLPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFperlpeddklPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFseaesdenfgdsefVTEKRKIKEKYEMFEEQVMKAVedgeygnsrNHSTIIEiiqdtsgenETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPETIVFSLLPQVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI
MESPLPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPETIVFSLLPQVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAillssvffvtflffgsiiLI
*****PLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS**********************************************STIIEIIQDTSG*NETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPETIVFSLLPQVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIIL*
*****PL*VCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEAE*******SEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQS************NVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPETIVFSLLPQVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLP**************MGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI
MESPLPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPETIVFSLLPQVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI
****LPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPETIVFSLLPQVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoo
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHo
iiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoo
SSSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiii
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHo
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MESPLPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEAESDENFGDSEFVTExxxxxxxxxxxxxxxxxxxxxGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPETIVFSLLPQVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query745 2.2.26 [Sep-21-2011]
Q651X6728 Cellulose synthase-like p yes no 0.918 0.939 0.375 1e-136
Q651X7737 Cellulose synthase-like p yes no 0.916 0.926 0.365 1e-135
Q8VYR4722 Cellulose synthase-like p yes no 0.915 0.944 0.355 1e-130
Q0WVN5751 Cellulose synthase-like p no no 0.932 0.925 0.352 1e-128
Q570S7760 Cellulose synthase-like p no no 0.910 0.892 0.356 1e-128
Q0DXZ1745 Cellulose synthase-like p no no 0.900 0.900 0.351 1e-127
Q8VZK9729 Cellulose synthase-like p no no 0.879 0.898 0.343 1e-121
Q8LPK5985 Cellulose synthase A cata no no 0.908 0.687 0.326 1e-113
Q69P511055 Cellulose synthase A cata no no 0.939 0.663 0.312 1e-110
A2Z1C81055 Cellulose synthase A cata N/A no 0.939 0.663 0.312 1e-110
>sp|Q651X6|CSLE6_ORYSJ Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1 Back     alignment and function desciption
 Score =  486 bits (1250), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 279/744 (37%), Positives = 410/744 (55%), Gaps = 60/744 (8%)

Query: 21  KLHAFLHCIAIALLIYYRASYL--LQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRP 78
           +L A      I L++YYRA+ +    E RA     WL + A+EL  +  W++ ++  W P
Sbjct: 24  RLQAATVAAGILLVLYYRATRVPAAGEGRA----AWLGMAAAELWFAVYWVITQSVRWCP 79

Query: 79  VSRTVFPERLPE--DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLS 136
           V R  F  RL E   + LP +DVF+CTADP  EP   V++T+LS MA +YP +K+ VYLS
Sbjct: 80  VRRRTFKNRLAERYKENLPGVDVFVCTADPHAEPPSLVISTILSVMAYNYPSEKISVYLS 139

Query: 137 DDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEAESDENFGDSEFVTEKRK 196
           DDGGS +T   + EA  FAK W+PFCRRY I+   P AYFSE+E   N    +   E   
Sbjct: 140 DDGGSILTFYALWEASMFAKKWLPFCRRYNIEPRSPAAYFSESEGHHNLCSPK---EWSF 196

Query: 197 IKEKYEMFEEQVMKAVEDGEYG-----------------NSRNHSTIIEIIQDTSGENET 239
           IK  YE   E++  AV  G+                    S+NH  I++++ D   +N  
Sbjct: 197 IKNLYEEMRERIDSAVMSGKIPEEIKLKHKGFDEWNSEMTSKNHQPIVQVLIDGKSQNAV 256

Query: 240 IRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDP 299
               ++  +P LVY++REKSP++ H+FK GALN L+RVS +IS+SP IL +DCDMY N+ 
Sbjct: 257 DDDGNV--LPTLVYMAREKSPQYHHNFKAGALNALIRVSALISDSPVILNVDCDMYSNNS 314

Query: 300 TSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFL 359
            S R A+CF LD + S  + FVQ+PQ ++N  +++IY  SL     ++  G+D   G   
Sbjct: 315 DSIRDALCFFLDEEMSHKIGFVQYPQNYNNMTKNNIYGNSLNVINHVEMRGLDSAGGCLY 374

Query: 360 TGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQ 419
            GTG + RRE L G    K     + K+ +G          +   H+N++       +++
Sbjct: 375 IGTGCFHRREILCGKKFSK-----DYKEDWGRG-------IKERGHENIDE------IEE 416

Query: 420 ETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTT 479
           + + LA+C+YE +T+WG E+G  Y    ED  TG  +HC+GW S Y++P R  F+G +  
Sbjct: 417 KAKSLATCTYELRTQWGNEIGVKYGCPVEDVITGLAIHCRGWESVYMEPQRAAFVGVAPA 476

Query: 480 NLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFA 539
            L   ++Q  RW+ G   + +S+    L+G  ++SL L M Y    L+     LP   + 
Sbjct: 477 TLAQTILQHKRWSEGNFTIFLSKHNTFLFGHGKISLQLQMGYCIYGLWA-ANSLPTIYYV 535

Query: 540 TLPQLCLLNGIPLYPETIVFSLLPQVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWR 599
            +P L L+ G PL+PE         + SP+   F ++F       L E + +G ++  W 
Sbjct: 536 MIPALGLVKGTPLFPE---------IMSPWATPFIYVFCVKTLYSLYEALLSGDTLKGWW 586

Query: 600 NEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSV 659
           N QR+WM+K +TS+ YG +D I KLLGL K SF  T KV D ++ KRYE    +F +SS 
Sbjct: 587 NGQRMWMVKRITSYLYGFIDTIRKLLGLSKMSFEITAKVSDGDEAKRYEQEILEFGSSSP 646

Query: 660 FLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKG 719
             V + ++ +LN   LV G+ +++A G W+    QV+L   I+I N  I E M VRKDKG
Sbjct: 647 EFVIIATVALLNFVCLVAGLSKIMA-GVWNVFLPQVILCGLIVITNIPIYEAMFVRKDKG 705

Query: 720 RISPSAILLSSVFFVTFLFFGSII 743
           RI P  + L+S+ FV   F   I+
Sbjct: 706 RI-PLPVTLASIGFVMLAFLLPIV 728
Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q651X7|CSLE1_ORYSJ Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2 Back     alignment and function description
>sp|Q8VYR4|CSLG2_ARATH Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1 Back     alignment and function description
>sp|Q0WVN5|CSLG3_ARATH Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2 Back     alignment and function description
>sp|Q570S7|CSLG1_ARATH Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1 Back     alignment and function description
>sp|Q0DXZ1|CSLE2_ORYSJ Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1 Back     alignment and function description
>sp|Q8VZK9|CSLE1_ARATH Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1 Back     alignment and function description
>sp|Q8LPK5|CESA8_ARATH Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1 Back     alignment and function description
>sp|Q69P51|CESA9_ORYSJ Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1 Back     alignment and function description
>sp|A2Z1C8|CESA9_ORYSI Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query745
224111028 857 predicted protein [Populus trichocarpa] 0.985 0.856 0.575 0.0
359477703733 PREDICTED: cellulose synthase-like prote 0.971 0.987 0.600 0.0
297737188822 unnamed protein product [Vitis vinifera] 0.970 0.879 0.580 0.0
255576870762 cellulose synthase, putative [Ricinus co 0.946 0.925 0.602 0.0
356548660736 PREDICTED: cellulose synthase-like prote 0.959 0.971 0.601 0.0
356535446740 PREDICTED: cellulose synthase-like prote 0.963 0.970 0.578 0.0
429326514723 cellulose synthase-like protein [Populus 0.957 0.986 0.585 0.0
224111026723 predicted protein [Populus trichocarpa] 0.957 0.986 0.582 0.0
359477392678 PREDICTED: cellulose synthase-like prote 0.893 0.982 0.554 0.0
255576868711 cellulose synthase, putative [Ricinus co 0.936 0.981 0.556 0.0
>gi|224111028|ref|XP_002315722.1| predicted protein [Populus trichocarpa] gi|222864762|gb|EEF01893.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  942 bits (2436), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 473/822 (57%), Positives = 587/822 (71%), Gaps = 88/822 (10%)

Query: 1   MESPLPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIP---WLLV 57
           ME   PLH+CHV+  S+ +N+LH  LH IAIA LIYYRAS+L QE +  + +P   WLLV
Sbjct: 46  MEISPPLHLCHVSKTSIFINRLHGLLHSIAIAFLIYYRASFLFQEPQTKATVPMLLWLLV 105

Query: 58  FASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNT 117
           F +ELLLSFIWL+G+AY W PVSRTVFPERLPEDDKLPAIDVFICT DP+KEPT  VMNT
Sbjct: 106 FVAELLLSFIWLIGQAYHWHPVSRTVFPERLPEDDKLPAIDVFICTVDPDKEPTLDVMNT 165

Query: 118 VLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS 177
           VLSAMALDYP +KL++YLSDDGG+ +TL GM+EA+RFAK W+PFC++Y IKT CP+AYFS
Sbjct: 166 VLSAMALDYPAEKLNLYLSDDGGAAVTLHGMKEAWRFAKSWLPFCKKYGIKTRCPKAYFS 225

Query: 178 E-AESDENFGDS-EFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNS------RNHSTIIE- 228
             ++ D++FG S EF+ +++ I+EKYE F+E+VM+  ED     +      R+H  +IE 
Sbjct: 226 ATSKDDDSFGSSNEFMADRQIIQEKYEDFKERVMRFREDFVLEETKSDITGRDHPALIEA 285

Query: 229 -------------------------------IIQDTSGENETIRQADLVEMPLLVYVSRE 257
                                          +IQD S E     +A+  EMPLLVYVSRE
Sbjct: 286 FLKKKELSPNWSLVIGKGKGGLTDAEHEADTVIQDNSNEEAPKDEAN--EMPLLVYVSRE 343

Query: 258 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSS 317
           K P H HHFK GALNVLLRVSGVISNSP+IL LDCDMYCNDPTSARQAMCF  DP  SSS
Sbjct: 344 KRPSHPHHFKAGALNVLLRVSGVISNSPHILVLDCDMYCNDPTSARQAMCFFFDPNISSS 403

Query: 318 LAFVQFPQKFHNFNEHDIYDGSLRSGY-------------RLQWPGMDGLKGPFLTGTGH 364
           LAFVQFPQ+FHN ++HDIYD  LRS +             ++ W G+DGLKGP L+GTG 
Sbjct: 404 LAFVQFPQRFHNISKHDIYDSQLRSTFGVRLVFIDFTLLNQILWQGLDGLKGPVLSGTGF 463

Query: 365 YIRRESLYGNFKHKGI---------------------DLAELKDTFGESNLFIKSLHQSY 403
           YI+R SLYG+   KG+                     +L EL+DTFG SN F+ S+ Q+Y
Sbjct: 464 YIKRNSLYGDSMQKGLVLSNPNHAASSQHALDDPKSCNLLELRDTFGLSNEFVNSIRQNY 523

Query: 404 EHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTS 463
           +   ++  ++S++L QET +LASC Y   TKWGEE  F Y SV+EDFFTGFILHCKGW S
Sbjct: 524 KANPMSYGSVSSMLLQETRILASCDYPRHTKWGEEACFLYHSVAEDFFTGFILHCKGWLS 583

Query: 464 TYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGE 523
            YL+PSRPQFLGTS T+LND+LIQGTRW+SGL++V +SRFCPL+YG  RMS L S+CY E
Sbjct: 584 VYLNPSRPQFLGTSITSLNDLLIQGTRWSSGLVEVGLSRFCPLIYGTLRMSFLESLCYAE 643

Query: 524 MSLFPLLYCLPLWCFATLPQLCLLNGIPLYPETIVFSLLPQVSSPFFMVFSFIFLSAICK 583
           +SLFPL YCLPLWCFAT+PQLCLLNGIPLYP+      +              FLSA+ K
Sbjct: 644 ISLFPLFYCLPLWCFATIPQLCLLNGIPLYPKVSSSFFIVFSFI---------FLSAVSK 694

Query: 584 HLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQ 643
           HL EV+ +GGS+ T   EQR+WM+KSV++H YGS+DA+MK +G+R+ASFLPTNK  D E+
Sbjct: 695 HLYEVLKSGGSINTLVYEQRLWMMKSVSTHTYGSLDAVMKRIGVREASFLPTNKAADEEK 754

Query: 644 VKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILI 703
            K Y+MG+FDF+TSS+ LVPMV+++ILN+A+ V GVIR+I  GNWD +  QV LS YIL+
Sbjct: 755 FKLYQMGKFDFKTSSMLLVPMVTVIILNMASFVLGVIRIIIAGNWDSMVVQVFLSSYILV 814

Query: 704 INFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI 745
           +N AI+EGM +RKDKG I  S I+LS+VF + FL  GS  L+
Sbjct: 815 MNSAIIEGMTIRKDKGCIPLSVIVLSTVFSIIFLCLGSFFLM 856

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359477703|ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297737188|emb|CBI26389.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255576870|ref|XP_002529321.1| cellulose synthase, putative [Ricinus communis] gi|223531245|gb|EEF33090.1| cellulose synthase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356548660|ref|XP_003542718.1| PREDICTED: cellulose synthase-like protein G2-like [Glycine max] Back     alignment and taxonomy information
>gi|356535446|ref|XP_003536256.1| PREDICTED: cellulose synthase-like protein G2-like [Glycine max] Back     alignment and taxonomy information
>gi|429326514|gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa] Back     alignment and taxonomy information
>gi|224111026|ref|XP_002315721.1| predicted protein [Populus trichocarpa] gi|222864761|gb|EEF01892.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359477392|ref|XP_002280640.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|255576868|ref|XP_002529320.1| cellulose synthase, putative [Ricinus communis] gi|223531244|gb|EEF33089.1| cellulose synthase, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query745
TAIR|locus:2124167985 IRX1 "IRREGULAR XYLEM 1" [Arab 0.457 0.346 0.380 1.3e-103
TAIR|locus:21789351026 IRX3 "IRREGULAR XYLEM 3" [Arab 0.389 0.282 0.389 2.2e-100
TAIR|locus:21760901084 CESA6 "cellulose synthase 6" [ 0.457 0.314 0.385 5.3e-100
TAIR|locus:21363081084 CESA2 "cellulose synthase A2" 0.370 0.254 0.404 2.2e-99
TAIR|locus:20525761088 CESA9 "cellulose synthase A9" 0.479 0.328 0.357 3.8e-99
TAIR|locus:21781931069 CESA5 "cellulose synthase 5" [ 0.457 0.318 0.374 6.1e-99
TAIR|locus:21567891065 CEV1 "CONSTITUTIVE EXPRESSION 0.456 0.319 0.360 3.8e-98
TAIR|locus:21724571049 CESA4 "cellulose synthase A4" 0.381 0.270 0.386 4e-98
TAIR|locus:20400801065 CESA10 "cellulose synthase 10" 0.480 0.336 0.355 2.6e-97
TAIR|locus:2060263755 CSLB03 "AT2G32530" [Arabidopsi 0.876 0.864 0.336 1.2e-95
TAIR|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 576 (207.8 bits), Expect = 1.3e-103, Sum P(2) = 1.3e-103
 Identities = 141/371 (38%), Positives = 205/371 (55%)

Query:    26 LHCIAIALLIYYRASYLLQETRAI---SIIPWLLVFASELLLSFI-WL-LGR-AYLWRPV 79
             +  I +AL   YR ++ +     +   S+I  +    S +L  F  W  + R  Y+ R  
Sbjct:   189 MRLIILALFFNYRITHPVDSAYGLWLTSVICEIWFAVSWVLDQFPKWSPINRETYIDRLS 248

Query:    80 SRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDG 139
             +R  F ER  E  +L A+D F+ T DP KEP     NTVLS +ALDYPVDK+  Y+SDDG
Sbjct:   249 AR--F-EREGEQSQLAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCYVSDDG 305

Query:   140 GSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS-EAESDENFGDSEFVTEKRKIK 198
              + ++   + E   FA+ W+PFC++Y I+   P+ YFS + +   +     FV E+R +K
Sbjct:   306 AAMLSFESLVETADFARKWVPFCKKYSIEPRAPEFYFSLKIDYLRDKVQPSFVKERRAMK 365

Query:   199 EKYEMFEEQ----VMKAVEDGEYG------------NSRNHSTIIEIIQDTSGENETIRQ 242
               YE F+ +    V KA +  E G            N+R+H  +I++    SG     R 
Sbjct:   366 RDYEEFKIRMNALVAKAQKTPEEGWTMQDGTSWPGNNTRDHPGMIQVFLGYSGA----RD 421

Query:   243 ADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSA 302
              +  E+P LVYVSREK P + HH K GA N L+RVS V++N+P+IL LDCD Y N+  + 
Sbjct:   422 IEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPFILNLDCDHYVNNSKAV 481

Query:   303 RQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGT 362
             R+AMCF +DP     + FVQFPQ+F   ++ D Y       + +   G+DG++GP   GT
Sbjct:   482 REAMCFLMDPVVGQDVCFVQFPQRFDGIDKSDRYANRNIVFFDVNMRGLDGIQGPVYVGT 541

Query:   363 GHYIRRESLYG 373
             G   RR++LYG
Sbjct:   542 GTVFRRQALYG 552
GO:0005886 "plasma membrane" evidence=ISM;TAS
GO:0016020 "membrane" evidence=IEA
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016759 "cellulose synthase activity" evidence=ISS;IMP
GO:0016760 "cellulose synthase (UDP-forming) activity" evidence=IEA
GO:0030244 "cellulose biosynthetic process" evidence=IEA;IMP
GO:0009834 "secondary cell wall biogenesis" evidence=IMP
GO:0005618 "cell wall" evidence=IDA
GO:0006970 "response to osmotic stress" evidence=IMP
GO:0009414 "response to water deprivation" evidence=IMP
GO:0009863 "salicylic acid mediated signaling pathway" evidence=IGI
GO:0009867 "jasmonic acid mediated signaling pathway" evidence=IGI
GO:0009873 "ethylene mediated signaling pathway" evidence=IGI
GO:0010116 "positive regulation of abscisic acid biosynthetic process" evidence=IGI
GO:0042742 "defense response to bacterium" evidence=IMP
GO:0050832 "defense response to fungus" evidence=IMP
GO:0052386 "cell wall thickening" evidence=IMP
GO:0009832 "plant-type cell wall biogenesis" evidence=RCA
GO:0010413 "glucuronoxylan metabolic process" evidence=RCA
GO:0045492 "xylan biosynthetic process" evidence=RCA
TAIR|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2176090 CESA6 "cellulose synthase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136308 CESA2 "cellulose synthase A2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2052576 CESA9 "cellulose synthase A9" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2060263 CSLB03 "AT2G32530" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8VYR4CSLG2_ARATH2, ., 4, ., 1, ., -0.35570.91540.9445yesno
Q651X7CSLE1_ORYSJ2, ., 4, ., 1, ., -0.36580.91670.9267yesno
Q651X6CSLE6_ORYSJ2, ., 4, ., 1, ., -0.3750.91810.9395yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.691
4th Layer2.4.1.12LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query745
PLN02893734 PLN02893, PLN02893, Cellulose synthase-like protei 0.0
PLN021891040 PLN02189, PLN02189, cellulose synthase 1e-132
PLN02190756 PLN02190, PLN02190, cellulose synthase-like protei 1e-122
PLN022481135 PLN02248, PLN02248, cellulose synthase-like protei 1e-100
PLN024361094 PLN02436, PLN02436, cellulose synthase A 7e-77
pfam03552716 pfam03552, Cellulose_synt, Cellulose synthase 6e-76
PLN029151044 PLN02915, PLN02915, cellulose synthase A [UDP-form 4e-75
PLN02195977 PLN02195, PLN02195, cellulose synthase A 1e-74
PLN026381079 PLN02638, PLN02638, cellulose synthase A (UDP-form 9e-74
PLN024001085 PLN02400, PLN02400, cellulose synthase 4e-72
PLN029151044 PLN02915, PLN02915, cellulose synthase A [UDP-form 1e-51
pfam03552716 pfam03552, Cellulose_synt, Cellulose synthase 4e-51
PLN02195977 PLN02195, PLN02195, cellulose synthase A 1e-49
PLN026381079 PLN02638, PLN02638, cellulose synthase A (UDP-form 5e-47
PLN024361094 PLN02436, PLN02436, cellulose synthase A 1e-46
PLN024001085 PLN02400, PLN02400, cellulose synthase 9e-46
TIGR03030713 TIGR03030, CelA, cellulose synthase catalytic subu 2e-12
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 2e-10
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 7e-10
PRK11498852 PRK11498, bcsA, cellulose synthase catalytic subun 5e-09
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 2e-08
TIGR03030713 TIGR03030, CelA, cellulose synthase catalytic subu 5e-07
COG1215439 COG1215, COG1215, Glycosyltransferases, probably i 1e-05
PRK11498 852 PRK11498, bcsA, cellulose synthase catalytic subun 6e-04
pfam13632194 pfam13632, Glyco_trans_2_3, Glycosyl transferase f 0.004
>gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein Back     alignment and domain information 
 Score =  618 bits (1595), Expect = 0.0
 Identities = 291/770 (37%), Positives = 436/770 (56%), Gaps = 80/770 (10%)

Query: 6   PLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLS 65
           PLH CH      I N++ A ++  AI  L+Y+    LL  T   + +  LL+  ++++L+
Sbjct: 13  PLHTCHPMR-RTIANRVFAVVYSCAILALLYHHVIALLHST---TTLITLLLLLADIVLA 68

Query: 66  FIWLLGRAYLWRPVSRTVFPERL----PEDDKLPAIDVFICTADPEKEPTFGVMNTVLSA 121
           F+W   +A+   PV R VF E L     E D  P +DVFICTADP KEP  GV+NT LS 
Sbjct: 69  FMWATTQAFRMCPVHRRVFIEHLEHYAKESD-YPGLDVFICTADPYKEPPMGVVNTALSV 127

Query: 122 MALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEAES 181
           MA DYP +KL VY+SDDGGS +TL    EA +FA  W+PFC++ +I   CP+AYFS    
Sbjct: 128 MAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHWLPFCKKNKIVERCPEAYFSSNSH 187

Query: 182 DENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNS--------------------R 221
                   +  E  +IK  YE  + +V   VE G+                        +
Sbjct: 188 -------SWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQ 240

Query: 222 NHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVI 281
           +H T+I+++ + SG+++ I       MP L+YVSREKS    HHFK GALN LLRVS  +
Sbjct: 241 DHPTVIQVLLE-SGKDKDITGHT---MPNLIYVSREKSKNSPHHFKAGALNTLLRVSATM 296

Query: 282 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLR 341
           +N+P IL LDCDMY NDP +  +A+C+ LDP     L +VQFPQ FH  N++DIY G L+
Sbjct: 297 TNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELK 356

Query: 342 SGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQ 401
             +++   GMDGL GP   GTG + RR   YG                G S+L       
Sbjct: 357 RLFQINMIGMDGLAGPNYVGTGCFFRRRVFYG----------------GPSSLI------ 394

Query: 402 SYEHKNVNGENLSNVLQQETEVLAS------CSYEHQTKWGEEVGFSYQSVSEDFFTGFI 455
             E   +N ++L +   +  EVLA       C+YE+QT WG ++GF Y S+ ED++TG+ 
Sbjct: 395 LPEIPELNPDHLVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYR 454

Query: 456 LHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSL 515
           L C+GW S + +P RP FLG S  NL+DVL Q  RW+ GL++V+ S++ P+ +G   + L
Sbjct: 455 LQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGL 514

Query: 516 LLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPETIVFSLLPQVSSPFFMVFSF 575
           L+ + Y   + +P ++ +P+  +A LPQL LLNG+         S+ P+ S P+F ++ F
Sbjct: 515 LMGLGYAHYAFWP-IWSIPITIYAFLPQLALLNGV---------SIFPKASDPWFFLYIF 564

Query: 576 IFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPT 635
           +FL A  + L + + +GG++  W N+QR+WMI+ ++S  +G ++ ++K LG+    F  T
Sbjct: 565 LFLGAYGQDLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVT 624

Query: 636 NKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQV 695
           +KV+D EQ KRYE G F+F  SS   +P+ +  I+N+ + + G+ ++    N + LF Q+
Sbjct: 625 SKVVDEEQSKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQRNLEGLFLQM 684

Query: 696 LLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFF-GSIIL 744
            L+ + ++  + I E M++R D G++ P  I L S+     L+   S   
Sbjct: 685 FLAGFAVVNCWPIYEAMVLRTDDGKL-PVKITLISIVLAWALYLASSFAF 733

Length = 734
>gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase Back     alignment and domain information
>gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>gnl|CDD|222273 pfam13632, Glyco_trans_2_3, Glycosyl transferase family group 2 Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 745
PLN024361094 cellulose synthase A 100.0
PLN024001085 cellulose synthase 100.0
PLN026381079 cellulose synthase A (UDP-forming), catalytic subu 100.0
PLN021891040 cellulose synthase 100.0
PLN02195977 cellulose synthase A 100.0
PLN02190756 cellulose synthase-like protein 100.0
PLN029151044 cellulose synthase A [UDP-forming], catalytic subu 100.0
PLN022481135 cellulose synthase-like protein 100.0
PLN02893734 Cellulose synthase-like protein 100.0
PF03552720 Cellulose_synt: Cellulose synthase; InterPro: IPR0 100.0
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 100.0
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 100.0
PRK05454691 glucosyltransferase MdoH; Provisional 100.0
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 100.0
PRK14583444 hmsR N-glycosyltransferase; Provisional 100.0
COG1215439 Glycosyltransferases, probably involved in cell wa 100.0
TIGR03111439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 100.0
PRK11204420 N-glycosyltransferase; Provisional 100.0
PRK14716504 bacteriophage N4 adsorption protein B; Provisional 99.98
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 99.97
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 99.97
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 99.97
PRK11234 727 nfrB bacteriophage N4 adsorption protein B; Provis 99.96
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 99.96
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 99.95
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 99.94
cd04190244 Chitin_synth_C C-terminal domain of Chitin Synthas 99.94
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 99.93
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 99.92
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 99.92
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 99.92
PRK15489 703 nfrB bacteriophage N4 adsorption protein B; Provis 99.92
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 99.91
COG2943736 MdoH Membrane glycosyltransferase [Cell envelope b 99.89
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 99.85
cd06438183 EpsO_like EpsO protein participates in the methano 99.8
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 99.8
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 99.74
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 99.74
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 99.71
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 99.67
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 99.66
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 99.65
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 99.64
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 99.6
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 99.6
cd06442224 DPM1_like DPM1_like represents putative enzymes si 99.6
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 99.6
PRK10073328 putative glycosyl transferase; Provisional 99.58
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 99.58
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 99.55
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 99.53
cd06423180 CESA_like CESA_like is the cellulose synthase supe 99.53
cd04188211 DPG_synthase DPG_synthase is involved in protein N 99.51
PF03142527 Chitin_synth_2: Chitin synthase; InterPro: IPR0048 99.5
PRK10018279 putative glycosyl transferase; Provisional 99.49
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 99.49
PRK10063248 putative glycosyl transferase; Provisional 99.48
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 99.46
PTZ00260333 dolichyl-phosphate beta-glucosyltransferase; Provi 99.42
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 99.4
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 99.29
PRK13915306 putative glucosyl-3-phosphoglycerate synthase; Pro 99.26
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 99.25
PRK10714325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 99.18
PF10111281 Glyco_tranf_2_2: Glycosyltransferase like family 2 99.17
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 99.16
COG1216305 Predicted glycosyltransferases [General function p 99.13
KOG2571862 consensus Chitin synthase/hyaluronan synthase (gly 99.06
COG0463291 WcaA Glycosyltransferases involved in cell wall bi 98.82
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 98.79
KOG2547431 consensus Ceramide glucosyltransferase [Lipid tran 98.68
KOG2977323 consensus Glycosyltransferase [General function pr 98.03
cd02514334 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es 97.97
KOG2978238 consensus Dolichol-phosphate mannosyltransferase [ 97.94
KOG3737603 consensus Predicted polypeptide N-acetylgalactosam 96.96
KOG3738559 consensus Predicted polypeptide N-acetylgalactosam 95.9
PF02364 817 Glucan_synthase: 1,3-beta-glucan synthase componen 95.48
PF1370497 Glyco_tranf_2_4: Glycosyl transferase family 2 95.29
KOG3736578 consensus Polypeptide N-acetylgalactosaminyltransf 94.62
PF13712217 Glyco_tranf_2_5: Glycosyltransferase like family; 92.59
PF03071434 GNT-I: GNT-I family; InterPro: IPR004139 The biosy 90.28
COG4092346 Predicted glycosyltransferase involved in capsule 89.59
PF03452269 Anp1: Anp1; InterPro: IPR005109 The members of thi 87.46
TIGR02460381 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase 85.4
PRK14503393 mannosyl-3-phosphoglycerate synthase; Provisional 85.16
PF09488381 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthas 81.68
KOG0916 1679 consensus 1,3-beta-glucan synthase/callose synthas 81.46
>PLN02436 cellulose synthase A Back     alignment and domain information 
Probab=100.00  E-value=4.2e-177  Score=1530.77  Aligned_cols=710  Identities=33%  Similarity=0.646  Sum_probs=656.1

Q ss_pred             CCCCceEEeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 004562            3 SPLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSR   81 (745)
Q Consensus         3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~l~~~E~~~~~~~~l~~~~~~~p~~r   81 (745)
                      ..+|||++++.+++. .+||+++++++++++++|+||+++..+    ++.|+|+++++||+||+|+|+|+|+.||+|++|
T Consensus       269 ~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~~----~a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv~R  344 (1094)
T PLN02436        269 GRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPVN----DAYGLWLTSVICEIWFAVSWILDQFPKWYPIER  344 (1094)
T ss_pred             cCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCc----ccHHHHHHHHHHHHHHHHHHHHccCcccccccc
Confidence            478899999999874 469999999999999999999998543    468999999999999999999999999999999


Q ss_pred             cCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHh
Q 004562           82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRF  154 (745)
Q Consensus        82 ~~~~~~l~~-------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~~~~dYP~~kl~Vyv~DDg~~~~T~~~l~Ea~~f  154 (745)
                      .+++++|.+       +++||.||||||||||++|||.+++|||+|+||+|||.|||.|||+|||++.+|+++|.||++|
T Consensus       345 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F  424 (1094)
T PLN02436        345 ETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEF  424 (1094)
T ss_pred             eeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHHHH
Confidence            999998863       2469999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-CC---------------C
Q 004562          155 AKWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED-GE---------------Y  217 (745)
Q Consensus       155 a~~wvpfc~k~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~-~~---------------~  217 (745)
                      ||+||||||||+|||||||+||+.+ +..+++..++|++||++||++|||||+|||.+.+. +.               +
T Consensus       425 Ak~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W~g  504 (1094)
T PLN02436        425 ARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPWPG  504 (1094)
T ss_pred             HHhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccCCC
Confidence            9999999999999999999999998 55677778999999999999999999999998653 11               4


Q ss_pred             CCCCCCccceeeeccCCCCchhhhhccccCcceEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 004562          218 GNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCN  297 (745)
Q Consensus       218 ~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~Yv~R~krp~~~~~~KAGaLN~~l~~s~~~s~g~~Il~lDAD~~~~  297 (745)
                      .+++|||+||||++++++..    |.++.++|+++||+|||||+++||+||||||+++|+||+|||||||||+|||||+|
T Consensus       505 ~~~~dHp~IIqVll~~~~~~----d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmYiN  580 (1094)
T PLN02436        505 NNVRDHPGMIQVFLGHSGVR----DVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHYIN  580 (1094)
T ss_pred             CCCCCCccceEEEecCCCCc----ccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccccC
Confidence            58899999999999987643    55778899999999999999999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHHhhcCCCCCCcEEEEcCCcccccCCccChHHHHHHHhhhhhHhhhhhcCCccccccccchhhhhccC-Ccc
Q 004562          298 DPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFK  376 (745)
Q Consensus       298 ~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~-~~~  376 (745)
                      ||+++|++||||+||+.++++||||+||+|+|.+++|+|+|++++||++.++|+||+|||+|+||||+|||+|||| .|+
T Consensus       581 ns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~pp  660 (1094)
T PLN02436        581 NSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYDAP  660 (1094)
T ss_pred             chHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccCCc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999 543


Q ss_pred             ccc----------------------------------------------------------------cchHhhhhhhCCc
Q 004562          377 HKG----------------------------------------------------------------IDLAELKDTFGES  392 (745)
Q Consensus       377 ~~~----------------------------------------------------------------~d~~~~~~~~~~~  392 (745)
                      ...                                                                .+.+.++++||+|
T Consensus       661 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG~S  740 (1094)
T PLN02436        661 KKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFGQS  740 (1094)
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhccc
Confidence            100                                                                0012355789999


Q ss_pred             hhHHhhhhhhccccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCeEEEeCCCCCe
Q 004562          393 NLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQ  472 (745)
Q Consensus       393 ~~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~svtED~~t~~rl~~~Gwrsvy~~~~~~~  472 (745)
                      .+|++|+..+...  .+....+++++++|++|++|.||++|+||+++||.|+|+|||+.||++||++||||+||+|++++
T Consensus       741 ~~fi~S~~~~~~~--~~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r~A  818 (1094)
T PLN02436        741 PVFVASTLLENGG--VPRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPA  818 (1094)
T ss_pred             HHHHHHHHHhhcC--CCCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCchh
Confidence            9999999888732  33333567899999999999999999999999999999999999999999999999999887789


Q ss_pred             eEeccCCChHHHHhHhHHhhcccccccccccCccccCC-CCCChhHHHHHHHHhHhhHhhHHHHHHHHHHhHHHHhcCCC
Q 004562          473 FLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGP-SRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIP  551 (745)
Q Consensus       473 ~~g~aP~~l~~~l~Qr~RWa~G~~qi~~~r~~pl~~~~-~~l~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~l~Ll~g~~  551 (745)
                      |.|+||+|+.+++.||+|||+|++||+++|+||++++. ++|+++||++|+++++|| ++++|.++|+++|++||++|++
T Consensus       819 F~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~-l~Slp~liY~~lP~l~LL~G~~  897 (1094)
T PLN02436        819 FKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYP-WTSIPLIVYCTLPAICLLTGKF  897 (1094)
T ss_pred             hcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCe
Confidence            99999999999999999999999999999999999763 689999999999999999 9999999999999999999999


Q ss_pred             ccccccccccCCCCchhHHHHHHHHHHHHHHHHHHHHHHhCccccchhchhhhHHhHhHHHHHHHHHHHHHHHHcCCCCC
Q 004562          552 LYPETIVFSLLPQVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKAS  631 (745)
Q Consensus       552 ~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~l~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~  631 (745)
                      ++|+         ++.+++++|+++|+++++++++|++|+|.++++|||+||+|+|.++++++++++++++|+||+++++
T Consensus       898 i~P~---------vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~  968 (1094)
T PLN02436        898 IVPE---------ISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTN  968 (1094)
T ss_pred             ecCc---------cchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCccc
Confidence            9998         7888899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeCCCCCcchhhhcccccceeecccchhHHHHHHHHHHHHHHHHHHHHhhhhcC--CchHHHHHHHHHHHHHHHHHHHH
Q 004562          632 FLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIV  709 (745)
Q Consensus       632 F~VT~K~~~~~~~~~y~~~~~~f~~~~~l~~P~~~l~~l~l~al~~g~~r~~~~g--~~~~~~~~~~~~~~~~~~~~p~~  709 (745)
                      |.||+|..+++.    .+++|+|+ ++++++|+++++++|++|+++|+.+++.+|  .|+++++++|+++|+++++|||+
T Consensus       969 F~VTsK~~d~~~----~a~ly~f~-~S~L~iP~tti~ilNlvaiv~Gi~~~i~~g~~~~g~l~~~l~~~~wvvv~lyPf~ 1043 (1094)
T PLN02436        969 FTVTSKAADDGE----FSELYLFK-WTSLLIPPTTLLIINIIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFL 1043 (1094)
T ss_pred             ceeccccccccc----ccceeeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHH
Confidence            999999876432    23688999 899999999999999999999999998755  68999999999999999999999


Q ss_pred             HHHhhhcCCCCCchhHHHHHHHHHHHHHHh
Q 004562          710 EGMIVRKDKGRISPSAILLSSVFFVTFLFF  739 (745)
Q Consensus       710 ~~l~~r~~~~~~p~~~~~~~~~~~~~~~~~  739 (745)
                      +||++|  ++++|+++++||++|+++|+++
T Consensus      1044 kgL~gr--~~r~P~~v~v~s~lla~~~~l~ 1071 (1094)
T PLN02436       1044 KGLLGK--QDRMPTIILVWSILLASILTLL 1071 (1094)
T ss_pred             HHHhcc--CCCCCeeehHHHHHHHHHHHHH
Confidence            999954  5599999999999999999986

>PLN02400 cellulose synthase Back     alignment and domain information
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>PLN02189 cellulose synthase Back     alignment and domain information
>PLN02195 cellulose synthase A Back     alignment and domain information
>PLN02190 cellulose synthase-like protein Back     alignment and domain information
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>PLN02248 cellulose synthase-like protein Back     alignment and domain information
>PLN02893 Cellulose synthase-like protein Back     alignment and domain information
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>PRK05454 glucosyltransferase MdoH; Provisional Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 Back     alignment and domain information
>PRK10018 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>PRK10063 putative glycosyl transferase; Provisional Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>KOG2977 consensus Glycosyltransferase [General function prediction only] Back     alignment and domain information
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides Back     alignment and domain information
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] Back     alignment and domain information
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2 Back     alignment and domain information
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B Back     alignment and domain information
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function Back     alignment and domain information
>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase Back     alignment and domain information
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis Back     alignment and domain information
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query745
4hg6_A 802 Structure Of A Cellulose Synthase - Cellulose Trans 3e-05
>pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802 Back     alignment and structure 
Iteration: 1

 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 76/180 (42%), Gaps = 14/180 (7%)
Query: 425 ASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDV 484
            S +   +    E  GF+ ++++ED  T   +H +GW S Y+D  R    G         
Sbjct: 319 GSAAVLRRRALDEAGGFAGETITEDAETALEIHSRGWKSLYID--RAMIAGLQPETFASF 376
Query: 485 LIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCY-GEMS--LFPLLYCLPLWCFATL 541
           + Q  RWA+G++ + + +      G   + +   +CY   MS   FPL+  +    F   
Sbjct: 377 IQQRGRWATGMMQMLLLKNPLFRRG---LGIAQRLCYLNSMSFWFFPLVRMM----FLVA 429
Query: 542 PQLCLLNGIPLYPETI--VFSLLPQVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWR 599
           P + L  GI ++  T   V + +P   +  F+V + +F       + EV     + Y  R
Sbjct: 430 PLIYLFFGIEIFVATFEEVLAYMPGYLAVSFLVQNALFARQRWPLVSEVYEVAQAPYLAR 489

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query745
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 49.1 bits (116), Expect = 5e-06
 Identities = 91/644 (14%), Positives = 169/644 (26%), Gaps = 216/644 (33%)

Query: 115 MNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI--CP 172
           M+         Y  D L V+                          F   +  K +   P
Sbjct: 7   MDFETGEHQYQYK-DILSVFEDA-----------------------FVDNFDCKDVQDMP 42

Query: 173 QAYFSEAESDENFGDSEFVTEKRKIKEKYEMF-------EEQVMKAVEDGEYGNSRNHST 225
           ++  S+ E D        +  K  +     +F       EE V K VE+       N+  
Sbjct: 43  KSILSKEEIDH------IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVL---RINYKF 93

Query: 226 IIEIIQ----DTSGENET-IRQADLV--EMPLLV--YVSREK------------SPEH-- 262
           ++  I+      S      I Q D +  +  +     VSR +             P    
Sbjct: 94  LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNV 153

Query: 263 -LHHFKGGALNVLLRVSGVISNSPYILGLDCDMY------CNDPTS---ARQAMCFHLDP 312
            +    G     +     V  +      +D  ++      CN P +     Q + + +DP
Sbjct: 154 LIDGVLGSGKTWV--ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDP 211

Query: 313 K-TSSSLAFVQFPQKFHNFNEH------------------DIYDGSLRSGYRLQWPGMDG 353
             TS S        + H+                      ++ +          W   + 
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKA-------WNAFN- 263

Query: 354 LKGPFLTGTGHYIRRESLY---GNFKHKGIDLAELKDTFGES---NLFIKSLHQSYEH-- 405
           L    L  T    R + +           I L     T       +L +K L    +   
Sbjct: 264 LSCKILLTT----RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP 319

Query: 406 ----------------------------KNVNGENLSNVLQQETEVLASCSYEHQTK--- 434
                                       K+VN + L+ +++    VL    Y        
Sbjct: 320 REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS 379

Query: 435 ----------------WGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTST 478
                           W + +      V        ++  +   ST   PS   +L    
Sbjct: 380 VFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS--IYLELKV 437

Query: 479 TNLNDVLIQGTRWASGLID-VSISR-FCPLLYGPSRMS----------LLLSMCYGEMSL 526
              N+  +  +     ++D  +I + F      P  +           L        M+L
Sbjct: 438 KLENEYALHRS-----IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTL 492

Query: 527 FPLLY------------CLPLWCFATLPQLCLLNGIPLYPETIVFSLLPQVSSPFF--MV 572
           F +++                W  A+   L  L  +  Y   I        + P +  +V
Sbjct: 493 FRMVFLDFRFLEQKIRHDSTAWN-ASGSILNTLQQLKFYKPYI------CDNDPKYERLV 545

Query: 573 FSFI-FLSAI------CKH---LQEVIST-GGSVY--TWRNEQR 603
            + + FL  I       K+   L+  +     +++    +  QR
Sbjct: 546 NAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query745
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 99.9
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 99.7
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 99.47
d2bo4a1381 Mannosylglycerate synthase, MGS {Rhodothermus mari 98.53
d1fo8a_343 N-acetylglucosaminyltransferase I {Rabbit (Oryctol 96.21
d1w55a1205 IspD/IspF bifunctional enzyme, CDP-me synthase dom 86.46
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=4e-23  Score=157.94  Aligned_cols=207  Identities=17%  Similarity=0.037  Sum_probs=134.7

Q ss_pred             CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             99999169998169999996589999999987199999960899982999900067689988741001346653055457
Q 004562           91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI  170 (745)
Q Consensus        91 ~~~~P~VdV~V~t~~~ynEp~~~v~~Tv~s~~~ldYP~~kl~v~V~DDg~s~~T~~~l~Ea~~fa~~wvpfcr~~~v~~r  170 (745)
                      ++++|.|+|+||+   |||....+.+||.|++++.||....+|+|+|||++|.|.....|.                   
T Consensus        18 ~~~~P~vSIIIp~---yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~~~l~~-------------------   75 (328)
T d1xhba2          18 PDNLPTTSVVIVF---HNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLES-------------------   75 (328)
T ss_dssp             CSCCCCEEEEEEE---SSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHH-------------------
T ss_pred             CCCCCCEEEEEEC---CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHH-------------------
T ss_conf             9999988999922---678179999999999964777797299999799970357999999-------------------


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCE
Q ss_conf             95334333445667898042799999999999999999886522887877889541322103799720222001257660
Q 004562          171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPL  250 (745)
Q Consensus       171 ~p~~yf~~~~~~~~~~~~~~~~e~~~ik~~y~~l~~ri~~~~~~~~~~~~~~h~~~~~v~~~~~~~~~~~~~~~~~~~P~  250 (745)
                                                    |.                                          ....+.
T Consensus        76 ------------------------------~~------------------------------------------~~~~~~   83 (328)
T d1xhba2          76 ------------------------------YV------------------------------------------KKLKVP   83 (328)
T ss_dssp             ------------------------------HH------------------------------------------HSSSSC
T ss_pred             ------------------------------HH------------------------------------------HHCCCC
T ss_conf             ------------------------------99------------------------------------------856897


Q ss_pred             EEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCC
Q ss_conf             89995467999888996999999998639878988899958998989607999999762299999947898277110258
Q 004562          251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNF  330 (745)
Q Consensus       251 l~Yi~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~Il~lDAD~~~~~p~~L~~~l~~f~D~~~~~~vg~VQ~Pq~f~n~  330 (745)
                      +.++..++     +.|.++|.|.|++.    ++||||+++|+|..+. |++|..++..|.+..    .+.|..+....+.
T Consensus        84 i~vi~~~~-----n~G~~~a~N~Gi~~----a~gd~i~flD~D~~~~-p~~l~~l~~~~~~~~----~~~v~~~~~~i~~  149 (328)
T d1xhba2          84 VHVIRMEQ-----RSGLIRARLKGAAV----SRGQVITFLDAHCECT-AGWLEPLLARIKHDR----RTVVCPIIDVISD  149 (328)
T ss_dssp             EEEEECSS-----CCCHHHHHHHHHHH----CCSSEEEEEESSEEEC-TTCHHHHHHHHHHCT----TEEEEEEEEEECS
T ss_pred             EEEEEECC-----CCCCHHHHHHHHHH----HHCCEEEECCCCCCCC-HHHHHHHHHHHHCCC----CEEEECCEEEECC
T ss_conf             09997324-----43216887899986----3110022017655667-369999999996389----7477410446616


Q ss_pred             CC-------CC---HHHHHHH-----HHHHHHHHHHHH----CCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHCC
Q ss_conf             96-------67---0787798-----743426856421----49953334420021331067754466535766643077
Q 004562          331 NE-------HD---IYDGSLR-----SGYRLQWPGMDG----LKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGE  391 (745)
Q Consensus       331 ~~-------~d---~~~~~~~-----~f~~~~~~g~d~----~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~  391 (745)
                      +.       ..   .+.....     ............    ...+..+|.+.++||+++.                   
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~f~-------------------  210 (328)
T d1xhba2         150 DTFEYMAGSDMTYGGFNWKLNFRWYPVPQREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQ-------------------  210 (328)
T ss_dssp             SSCCEECCCTTEEEEECTTCCEEEEECCHHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHH-------------------
T ss_pred             CCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEECCEEEEEEHHHHH-------------------
T ss_conf             7602215775333443312232224562454320234556663234132211132299999-------------------


Q ss_pred             CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCHHHHHHHHHHCCCEEEEECC
Q ss_conf             2467865432101344677650145787422111420001245441012369996---5319999999987976999199
Q 004562          392 SNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSV---SEDFFTGFILHCKGWTSTYLDP  468 (745)
Q Consensus       392 ~~~~v~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~si---tED~~ts~rl~~~Gwrs~y~~~  468 (745)
                                                                   +.|||+++..   .||.+.++|+..+||++.|+|.
T Consensus       211 ---------------------------------------------~vGgfDe~~~~~g~ED~Dl~~R~~~~G~~i~~~p~  245 (328)
T d1xhba2         211 ---------------------------------------------EIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTC  245 (328)
T ss_dssp             ---------------------------------------------HTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEE
T ss_pred             ---------------------------------------------HHCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECC
T ss_conf             ---------------------------------------------81899987767675699999999980991999377


Q ss_pred             C
Q ss_conf             9
Q 004562          469 S  469 (745)
Q Consensus       469 ~  469 (745)
                      .
T Consensus       246 ~  246 (328)
T d1xhba2         246 S  246 (328)
T ss_dssp             E
T ss_pred             E
T ss_conf             6
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Back     information, alignment and structure
>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure
>d1w55a1 c.68.1.13 (A:3-207) IspD/IspF bifunctional enzyme, CDP-me synthase domain {Campylobacter jejuni [TaxId: 197]} Back     information, alignment and structure