Citrus Sinensis ID: 004595

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740---
Protein Sequence
MERFSQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSDIDFDDVFGGPPRRSSMHETRCSYSPSEVTENDGFRGDDETVASRNSWNGVREKPVFGEEGMNRRRYPSENFFDDIFRGNGSLSSSPRICDRDPYSSSSPASRVLSPARPLPPKAEPSGISIHAEFSLPAKFTKGMELPTFGLAPRSPYKSQDGTSNGINHHSSSLLRSSSLNLSREEGNETRSSYRQSILSREFSLSNKDADTETVGNSKMESNSSEVLTSGNLFHFSIYKWASKRVPFDMPLREVNRSKSKENNDADKCSSSDGWVGGEKELPTETLHDTKLHLNVGVLADSESFRIEHNKQNDTAPPDTSTENTVETWPTADPGDATLENTGEETKSHSQSEIGLHNELEKVSVVAEEAHKPELKPLCSLFYNDHYERSNEEMNKNASEKESKVKCTKKSSVVPYFSKNKKKQDVKRECGEVGKGGLQGSPMNSKDLCKTGVRGKVKEFVKIFNQEGLSKSKINVDPQSKSSRWKGTGNSKPEKDANFSKIAPDGKIHKSTEHEKKSFPDTPIMVNGNLPHSEKQLAATNTTNHMSNGTPEWKDSSSTASASEYLASPLNESGGNGSKETGDIDKSFQGNSLVNQVTKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTHLVRCD
Secondary Structure (PSIPRED)
cccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccHHHHHccccccccccccccccccccHHHHHHccHHHHHHcccccccccccccccccccHHHHHccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcHHHHHHHHHccccccHHHHHHHHHHHHcccccHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEEcc
Secondary Structure Prediction (SSPRO)
ccccccccEEEEcccccccccccccccccccccccccccccHHHcccccccccccccEEEEccccccccccccccccccEEccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccEEEEEEEEccccccEEEEcccccccccccccccHcccccccccccccccccHHccccccEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccEEccccccccccccccccHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHcHHHcccccccccccccccHccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHcccccccccccccccHHHHHHHHHccHHcccHHHHHHHHHHHHcccHHHHHHHHccHHHHHHHHHHHHHHHccccccccccHHHcccHHHHHHHHHHHHEEEcHHHHcccccHHHHHHHHHHHHHHHHHccccccEEEEcc
Coil and Loop (DISEMBL)
MERFSQRESVLlgygpqrsfmnehsssspkptaaggnsdidfddvfggpprrssmhetrcsyspsevtendgfrgddetvasrnswngvrekpvfgeegmnrrrypsenffddifrgngslssspricdrdpysssspasrvlsparplppkaepsgisihaefslpakftkgmelptfglaprspyksqdgtsnginhhsssllrssslnlsreegnETRSSYRQSILSrefslsnkdadtetvgnskmesnssevltsgnlfhfSIYKwaskrvpfdmplrevnrskskenndadkcsssdgwvggekelptetlhdtklhlnvgvladsesfriehnkqndtappdtstentvetwptadpgdatlentgeetkshsqseiglhneleKVSVVAEeahkpelkplcslfyndhyersneeMNKNAsekeskvkctkkssvvpyfsknkkkqdvkrecgevgkgglqgspmnskdlcktgvrgKVKEFVKIFNqeglskskinvdpqskssrwkgtgnskpekdanfskiapdgkihkstehekksfpdtpimvngnlphsekqlaatnttnhmsngtpewkdssstasaSEYLasplnesggngsketgdidksfqgnslvnqvtkddnklrklgndpqefqAIDVQIRkwsngkegnIRSLLSTLQYIlwpasgwkpvplvdiiegnavKRSYQKALLclhpdklqqkgatcqQTYIAEKVLIFCRRHglisthlvrcd
Flexible Loop (DISEMBL)
MERFSQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSDIDFDDVFGGPPRRssmhetrcsyspsevtendgfrgddetvasrnswngvrekpvfgeegmnrrrYPSENFFDDIFRgngslssspriCDRDpysssspasrvlspARPLPPKAEPSGISIHAEFSLPAKFTKGMELPTFGLAPRSPYKSQDGTSNGINhhsssllrssslnlsreEGNETRSSyrqsilsrefslsnkdadtetvgnskmesnssevltsgNLFHFSIYKWASKRVPFDMPLREVnrskskenndadkcsssdgwvggEKELPTetlhdtklHLNVGVLADSESFRIEhnkqndtappdtstentvetwptadpGDATLENTGEETKshsqseiglhNELEKVSVVAEEAhkpelkplcsLFYNDHYERSNEEMnknasekeskvkctkkssvvpyfsknkkkqdvkrECGEvgkgglqgspmnskdlcKTGVRGKVKEFVKIfnqeglskskinvdpqskssrwkgtgnskpekdanfskiapdgkihkstehekksfpdtpiMVNGNLPHSEKQLAATNTTNHMSNGTPEWKDSSSTASASEYLASPLNESGGNGSKETGDIDKSFQGNSLVNQVTKddnklrklgndpqefqaIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHglisthlvrcd
Low Complexity Region (SEG)
MERFSQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSDIDFDDVFGGPPRRSSMHETRCSYSPSEVTENDGFRGDDETVASRNSWNGVREKPVFGEEGMNRRRYPSENFFDDIFRGNGSLSSSPRICDRDpysssspasrvlsparpLPPKAEPSGISIHAEFSLPAKFTKGMELPTFGLAPRSPYKSQDGTSNGInhhsssllrssslnlsrEEGNETRSSYRQSILSREFSLSNKDADTETVGNSKMESNSSEVLTSGNLFHFSIYKWASKRVPFDMPLREVNRSKSKENNDADKCSSSDGWVGGEKELPTETLHDTKLHLNVGVLADSESFRIEHNKQNDTAPPDTSTENTVETWPTADPGDATLENTGEETKSHSQSEIGLHNELEKVSVVAEEAHKPELKPLCSLFYNDHYERSNEEMNKNAsekeskvkctkkssvvPYFSKNKKKQDVKRECGEVGKGGLQGSPMNSKDLCKTGVRGKVKEFVKIFNQEGLSKSKINVDPQSKSSRWKGTGNSKPEKDANFSKIAPDGKIHKSTEHEKKSFPDTPIMVNGNLPHSEKQLAATNTTNHMSNGTPEWKDSSSTASASEYLASPLNESGGNGSKETGDIDKSFQGNSLVNQVTKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTHLVRCD
Disordered region (IsUnstruct)
**************************************************************************************************************F**I***********************************************************************************************************************************************LTSGNLFHFSIYKWASKRVPFD***************************************DTKLHLNVGVLA***************************************************************************KPLCSLFYND***************************************************************CKTGVRGKVKEFVKIFN****************************************************************************************************************************************************FQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTHLVR**
Disordered Region (DISOPRED)
***********LGYGPQR************************DDVFG****************************************************************************************************************************************************************************************************************************IYKWAS***************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************VQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTHLVRCD
Disordered Region (DISEMBL)
********SVLLGYGPQRSF**************GGNSDIDFDDVFGGPP**********************FRGDDETVASRNSWNGVREKPVFGEEGMNRRRYPSENFFDDIFRGNGSLSS****************************KAEPSGISIHAEFSLPAKFTKGMELPTFGLAPRSPYKSQDGTSNGINHHS************************QSILSREFSL********************EVLTSGNLFHFSIYKWASKRVPFDMPLREVNR****************GWVGGEKELPTETLHDTKLHLNVGVLADSESFRIEHNK****************TWPTADPGDATLE*************IGLHNELEKVSVVAEEAHKPELKPLCSLFYNDHYERS*******************KSSVVPYFSK**********CGEVGKGGLQGSPMNSKDLCKTGVRGKVKEFVKIFNQEGLSKS**********************KDANFSKIAPDGKIHKSTEHEKKSFPDTPIMVNGNLPHSEKQLAATNTTNHMS***************SEYLASPLN*********TGDIDKSFQGNSLVNQVTKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTHLVRCD
Disordered Region (DISPRO)
******RESVLL*YGPQRS*******************DIDFDDVFGGPPRRS***************************A****WNGVREKPVFGEEGMNRRRYPSENFFDDIFRGN****************************************************TK*MELPTFGL********QDGTSNGI*H*S***********************************************************GNLFHFSIYKWASKRVPFDMPLR***************************ELPTETLHDTKLHLNVGVLADSE********************************************************LEKVSVVAE*AHKPELKPLCSLFYNDHY**************E***********************************************************K**********************************************************************************************************************************************RKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTHLVRCD
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MERFSQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSDIDFDDVFGGPPRRSSMHETRCSYSPSEVTENDGFRGDDETVASRNSWNGVREKPVFGEEGMNRRRYPSENFFDDIFRGNGSLSSSPRICDRDPYSSSSPASRVLSPARPLPPKAEPSGISIHAEFSLPAKFTKGMELPTFGLAPRSPYKSQDGTSNGINHHSSSLLRSSSLNLSREEGNETRSSYRQSILSREFSLSNKDADTETVGNSKMESNSSEVLTSGNLFHFSIYKWASKRVPFDMPLREVNRSKSKENNDADKCSSSDGWVGGEKELPTETLHDTKLHLNVGVLADSESFRIEHNKQNDTAPPDTSTENTVETWPTADPGDATLENTGEETKSHSQSEIGLHNELEKVSVVAEEAHKPELKPLCSLFYxxxxxxxxxxxxxxxxxxxxxVKCTKKSSVVPYFSKNKKKQDVKRECGEVGKGGLQGSPMNSKDLCKTGVRGKVKEFVKIFNQEGLSKSKINVDPQSKSSRWKGTGNSKPEKDANFSKIAPDGKIHKSTEHEKKSFPDTPIMVNGNLPHSEKQLAATNTTNHMSNGTPEWKDSSSTASASEYLASPLNESGGNGSKETGDIDKSFQGNSLVNQVTKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTHLVRCD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	743	2.2.26 [Sep-21-2011]
Q0WQ57	891	Auxilin-related protein 2	no	no	0.113	0.094	0.630	1e-29
Q9SU08	904	Auxilin-related protein 1	no	no	0.113	0.092	0.607	1e-28
Q27974	910	Putative tyrosine-protein	yes	no	0.080	0.065	0.475	3e-10
O13773	697	UBA domain-containing pro	yes	no	0.096	0.103	0.438	3e-10
O75061	913	Putative tyrosine-protein	yes	no	0.080	0.065	0.475	4e-10
Q80TZ3	938	Putative tyrosine-protein	yes	no	0.080	0.063	0.459	6e-10
P97874	1305	Cyclin-G-associated kinas	no	no	0.104	0.059	0.390	1e-09
Q99KY4	1305	Cyclin-G-associated kinas	no	no	0.087	0.049	0.436	1e-09
O14976	1311	Cyclin-G-associated kinas	no	no	0.087	0.049	0.436	2e-09
Q06677	668	Auxilin-like clathrin unc	yes	no	0.099	0.110	0.346	2e-05

>sp|Q0WQ57|AUXI2_ARATH Auxilin-related protein 2 OS=Arabidopsis thaliana GN=At4g12770 PE=1 SV=1

 Score =  132 bits (332), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 53/84 (63%), Positives = 67/84 (79%)

Query: 647 IDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHP 706
           +DV+IR+W  GKEGN+R+LLSTLQY+LWP  GW+PV L D+I G +VK+ Y+KA LC+HP
Sbjct: 796 LDVEIRRWGAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITGASVKKVYRKATLCIHP 855

Query: 707 DKLQQKGATCQQTYIAEKVLIFCR 730
           DK+QQKGA  QQ YIAEKV    +
Sbjct: 856 DKVQQKGANLQQKYIAEKVFDMLK 879

Promotes probably uncoating of clathrin-coated vesicles.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9SU08|AUXI1_ARATH Auxilin-related protein 1 OS=Arabidopsis thaliana GN=At4g12780 PE=1 SV=2

 Score =  128 bits (322), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 51/84 (60%), Positives = 66/84 (78%)

Query: 647 IDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHP 706
           +DV+I++W  GKEGN+R+LLSTLQY+LWP  GW+PV L D+I   +VK+ Y+KA LC+HP
Sbjct: 809 LDVEIKRWGAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAASVKKVYRKATLCIHP 868

Query: 707 DKLQQKGATCQQTYIAEKVLIFCR 730
           DK+QQKGA  QQ YIAEKV    +
Sbjct: 869 DKVQQKGANLQQKYIAEKVFDMLK 892

Promotes probably uncoating of clathrin-coated vesicles.

Arabidopsis thaliana (taxid: 3702)

>sp|Q27974|AUXI_BOVIN Putative tyrosine-protein phosphatase auxilin OS=Bos taurus GN=DNAJC6 PE=1 SV=1

 Score = 67.8 bits (164), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)

Query: 649 VQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKALLCLHPD 707
           ++I +W  GKE NIR+LLST+  +LW   + WKPV + D++    VK+ Y+KA+L +HPD
Sbjct: 817 LKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPD 876

Query: 708 K 708
           K
Sbjct: 877 K 877

Recruits HSPA8/HSC70 to clathrin-coated vesicles and promotes uncoating of clathrin-coated vesicles.

Bos taurus (taxid: 9913)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|O13773|UCP7_SCHPO UBA domain-containing protein 7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ucp7 PE=4 SV=1

 Score = 67.8 bits (164), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 1/73 (1%)

Query: 651 IRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQ 710
           + KW  GKE N+R+LL++L  ILWP   W+ V L +++    VK +Y KA+  +HPDKL 
Sbjct: 607 VNKWKEGKESNLRALLASLDTILWPECRWQKVSLSELVLPKKVKIAYMKAVSRVHPDKLP 666

Query: 711 QKGATCQQTYIAE 723
           Q+ +   Q  IAE
Sbjct: 667 QQTSVEHQ-LIAE 678

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

>sp|O75061|AUXI_HUMAN Putative tyrosine-protein phosphatase auxilin OS=Homo sapiens GN=DNAJC6 PE=1 SV=3

 Score = 67.4 bits (163), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)

Query: 649 VQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKALLCLHPD 707
           ++I +W  GKE NIR+LLST+  +LW   + WKPV + D++    VK+ Y+KA+L +HPD
Sbjct: 820 LKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPD 879

Query: 708 K 708
           K
Sbjct: 880 K 880

Recruits HSPA8/HSC70 to clathrin-coated vesicles and promotes uncoating of clathrin-coated vesicles.

Homo sapiens (taxid: 9606)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|Q80TZ3|AUXI_MOUSE Putative tyrosine-protein phosphatase auxilin OS=Mus musculus GN=Dnajc6 PE=2 SV=2

 Score = 67.0 bits (162), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 43/61 (70%), Gaps = 1/61 (1%)

Query: 649 VQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKALLCLHPD 707
           ++I +W  GKE NIR+LLST+  +LW   + WKPV + D++    VK+ Y++A+L +HPD
Sbjct: 845 LKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRRAVLVVHPD 904

Query: 708 K 708
           K
Sbjct: 905 K 905

Recruits HSPA8/HSC70 to clathrin-coated vesicles and promotes uncoating of clathrin-coated vesicles.

Mus musculus (taxid: 10090)

EC: 3

EC: .

EC: 1

EC: .

EC: 3

EC: .

EC: 4

EC: 8

>sp|P97874|GAK_RAT Cyclin-G-associated kinase OS=Rattus norvegicus GN=Gak PE=2 SV=1

 Score = 65.9 bits (159), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 4/82 (4%)

Query: 628  TKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVD 686
            T  + + ++L  D   F+   +++  W  GKE NIR+LLSTL  +LW   S W PV + D
Sbjct: 1194 TMAEMRKQELARDTDPFK---LKLLDWIEGKERNIRALLSTLHTVLWDGESRWTPVSMAD 1250

Query: 687  IIEGNAVKRSYQKALLCLHPDK 708
            ++    VK+ Y++A+L +HPDK
Sbjct: 1251 LVTPEQVKKQYRRAVLVVHPDK 1272

Associates with cyclin G and CDK5. Seems to act as an auxilin homolog that is involved in the uncoating of clathrin-coated vesicles by Hsc70 in non-neuronal cells. Expression oscillates slightly during the cell cycle, peaking at G1.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q99KY4|GAK_MOUSE Cyclin-G-associated kinase OS=Mus musculus GN=Gak PE=1 SV=2

 Score = 65.5 bits (158), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 6/71 (8%)

Query: 639  NDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSY 697
             DP + + +D     W  GKE NIR+LLSTL  +LW   S W PV + D++    VK+ Y
Sbjct: 1207 TDPLKLKLLD-----WIEGKERNIRALLSTLHTVLWDGESRWTPVSMADLVTPEQVKKQY 1261

Query: 698  QKALLCLHPDK 708
            ++A+L +HPDK
Sbjct: 1262 RRAVLVVHPDK 1272

Associates with cyclin G and CDK5. Seems to act as an auxilin homolog that is involved in the uncoating of clathrin-coated vesicles by Hsc70 in non-neuronal cells. Expression oscillates slightly during the cell cycle, peaking at G1.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O14976|GAK_HUMAN Cyclin-G-associated kinase OS=Homo sapiens GN=GAK PE=1 SV=2

 Score = 64.7 bits (156), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/71 (43%), Positives = 44/71 (61%), Gaps = 6/71 (8%)

Query: 639  NDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSY 697
             DP + + +D     W  GKE NIR+LLSTL  +LW   S W PV + D++    VK+ Y
Sbjct: 1213 TDPLKLKLLD-----WIEGKERNIRALLSTLHTVLWDGESRWTPVGMADLVAPEQVKKHY 1267

Query: 698  QKALLCLHPDK 708
            ++A+L +HPDK
Sbjct: 1268 RRAVLAVHPDK 1278

Associates with cyclin G and CDK5. Seems to act as an auxilin homolog that is involved in the uncoating of clathrin-coated vesicles by Hsc70 in non-neuronal cells. Expression oscillates slightly during the cell cycle, peaking at G1.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q06677|SWA2_YEAST Auxilin-like clathrin uncoating factor SWA2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SWA2 PE=1 SV=1

 Score = 51.6 bits (122), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 4/78 (5%)

Query: 650 QIRKWSNGKEGNIRSLLSTLQYIL-WPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDK 708
           +I  W +GK+ +IR LL+ L  +L W    WK V + D++    VK +Y KA+   HPDK
Sbjct: 577 KISSWKDGKDDDIRHLLANLSSLLTW--CNWKDVSMQDLVMPKRVKITYMKAVAKTHPDK 634

Query: 709 LQQKGATCQQTYIAEKVL 726
           + +   + +   IAE + 
Sbjct: 635 IPE-SLSLENKMIAENIF 651

Cofactor for the uncoating of clathrin-coated vesicles (CCVs) by Hsp70-type chaperones (SSA1/2/3 and SSB1/2). Coat disassembly is important for fusion of vesicles with target membranes and for recycling components of clathrin coats to the cytoplasm for further rounds of vesicle formation. Binds to assembled clathrin and recruits the ATP-activated chaperone to CCVs. Stimulates the ATPase activity of the clathrin-associated Hsp70-type chaperone SSA1, which then disrupts clathrin-clathrin interactions, leading to release of the clathrin coat. In addition, prevents unproductive clathrin assembly in the cell. Also required for cortical endoplasmic reticulum inheritance.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	743
224136558	725	predicted protein [Populus trichocarpa]	0.923	0.946	0.448	1e-137
225458352	766	PREDICTED: uncharacterized protein LOC10	0.935	0.907	0.428	1e-134
255538574	770	heat shock protein binding protein, puta	0.913	0.881	0.434	1e-134
449460161	742	PREDICTED: uncharacterized protein LOC10	0.919	0.920	0.397	2e-99
356518054	677	PREDICTED: uncharacterized protein LOC10	0.830	0.911	0.364	3e-93
449477022	665	PREDICTED: uncharacterized protein LOC10	0.825	0.921	0.371	3e-89
224067383	615	predicted protein [Populus trichocarpa]	0.432	0.521	0.507	3e-73
356510239	280	PREDICTED: uncharacterized protein LOC10	0.331	0.878	0.420	4e-46
18410769	651	J-domain protein required for chloroplas	0.382	0.436	0.390	6e-46
297842251	648	J-domain protein required for chloroplas	0.308	0.353	0.427	2e-43

>gi|224136558|ref|XP_002326890.1| predicted protein [Populus trichocarpa] gi|222835205|gb|EEE73640.1| predicted protein [Populus trichocarpa]

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 336/749 (44%), Positives = 434/749 (57%), Gaps = 63/749 (8%)

Query: 1   MERFSQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSDIDFDDVFGGPPRRSSMHETRC 60
           MERFSQRESVLLGY  QR   N   SSS    +  GNSDIDF DVFGGPPRRSS+ E R 
Sbjct: 1   MERFSQRESVLLGYNLQRQSKNHPGSSS---NSQHGNSDIDFIDVFGGPPRRSSLQEVRS 57

Query: 61  SYSPSEVTENDGFR-GDDETVASRNSWNGVREKPVFGEEGMNRRRYPSENFFDDIFRGNG 119
           S++  E T++   R GD +T+ SRNS +G+ EKPVFG+E +NRRRYP  +FFDDIFRGN 
Sbjct: 58  SFA--ETTDSFVSRSGDVDTMLSRNSLSGLNEKPVFGDENVNRRRYPRNDFFDDIFRGNK 115

Query: 120 SLSSSPRICDRDPYSSSSPASRVLSPARPLPPKAEPSGISIHAEFSLPAKFTKGMELPTF 179
           SLSS P+  D D  SS+ P SRVLSP   LPP+A+P   S+ A+FSL AK +K  +LPTF
Sbjct: 116 SLSSPPKKHDLDSLSST-PGSRVLSPTGQLPPRADPWSPSLPAQFSLSAKLSKRTDLPTF 174

Query: 180 GLAPRSPYKSQDGTSNGINHHSSSLLRSSSLNLSREEGNETRSSYRQSILSREFSL---- 235
             +  S +K++DG S G+ +++ S   +S  +  R+E   T    RQS LS+E SL    
Sbjct: 175 NSSAHSMHKNKDGASYGVGNYAHS---ASQTDHVRDEL--TNDISRQSTLSKELSLTSEE 229

Query: 236 ---SNKDADTETVGNSKMESNSSEVLTSGNLFHFSIYKWASKRVPFDMPLREVNRSKSKE 292
              S K  +T+T  N K +S+SS+V T+GN  HFSIYKWAS+ +PF M LR   +S+  E
Sbjct: 230 SSNSTKHEETDTNTNLKSDSDSSDVPTNGNQSHFSIYKWASEGIPFVMSLRGATKSRLDE 289

Query: 293 NNDADKCSSSDGWVGGE---KELPTETLHDTKLHLNVGVLADSESFRIEHNKQNDTAPPD 349
           N +  +CSS+ GW+  E   +EL +   HD        +   S S  IE N+Q++    D
Sbjct: 290 NCELQRCSSASGWIASEGIARELRSANPHD--------IDVPSFSSHIELNQQDNRFLFD 341

Query: 350 TSTENTVETWPTADPGDATLENTGEETKSHSQS--EIGLHNEL-----EKVSVVAEEAHK 402
            S +  VE  P     D        +T S  Q   E G   +L     E++SVV  E  K
Sbjct: 342 KSIQCEVE--PCQIVEDTIFPVPELDTPSTHQVIVEDGPEMDLSEKTKERISVVTLEDRK 399

Query: 403 PELKPLCSLFYNDHYERSNEEMNKNASEKESKVKCTKKSSVVPYFSKNKKKQDVKRECG- 461
            ELKP  SL   +  E+  +EM +    KE K + TKK S V   S+N K QD KR    
Sbjct: 400 TELKPPRSLLSENDDEQCIDEMTRKNGLKERKAESTKKPSAVFDVSENVKDQDEKRTTAN 459

Query: 462 --EVGKGGLQGSPMNSKD-LCKTGVRGKVKEFVKIFNQEGLSKSKINV-DPQSKSSRWKG 517
             EV K   Q  P  S+D L K  +RGKVKEFVKIFN+ G  K   ++ D Q +SS    
Sbjct: 460 NVEVDKADFQYPPTKSRDSLEKNRLRGKVKEFVKIFNRAGSEKPNFDLNDSQHQSS---- 515

Query: 518 TGNSKPEKDANFSKIAPDGKIHKSTEHEKKSFPDTPIMVNGNLPHSEKQLAATNTTNHMS 577
               + E+    +    + K+H S     K+ PD  I+V   L  SEKQ   T   N  S
Sbjct: 516 ---GRKERIKFNTDDTRNEKMH-SRNVNNKNMPDASILVKKCLKQSEKQHPETKANNLRS 571

Query: 578 NGTPEWKDSSSTASASEYLASPLNESGGNGSKETGDIDKSFQGNSLVNQVTKDDNKLRKL 637
                 +  SS ++A+ Y+   L  +         D D SF    L+ ++ +D+ +  + 
Sbjct: 572 ESVSSGRKDSSVSTAA-YIPDGLEST-------IADTDMSFL---LITELAQDEERELQT 620

Query: 638 GNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSY 697
            ++ +E Q ID +I+KWS GKEGNIRSLLSTLQY+LW  SGW PVPLVDIIEGNAVKR+Y
Sbjct: 621 SDNHEEIQVIDDKIQKWSKGKEGNIRSLLSTLQYVLWSGSGWNPVPLVDIIEGNAVKRTY 680

Query: 698 QKALLCLHPDKLQQKGATCQQTYIAEKVL 726
           QKALLCLHPDKLQQKGAT  Q Y AEK+ 
Sbjct: 681 QKALLCLHPDKLQQKGATSHQKYTAEKIF 709

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225458352|ref|XP_002281702.1| PREDICTED: uncharacterized protein LOC100264365 [Vitis vinifera] gi|302142455|emb|CBI19658.3| unnamed protein product [Vitis vinifera]

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 331/773 (42%), Positives = 445/773 (57%), Gaps = 78/773 (10%)

Query: 1   MERFSQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSDIDFDDVFGGPPRRSSMHETRC 60
           MER   +E+ +LG   QRS +   S SSPK      +SD+DF DVFGGPPRR S   TR 
Sbjct: 9   MERCCHKENTVLGCRHQRSLVT--SVSSPKTPLR--HSDVDFHDVFGGPPRRLSNQVTR- 63

Query: 61  SYSPSEVTENDGFRGDDETVASRNSWNGVREKPVFGEEGMNRRRYPSENFFDDIFRGNGS 120
            YS  E TE    RG ++ V+  N W G+ EKPVFGE+G NRRRY SE+FFDDIFRG+ S
Sbjct: 64  -YSFGEGTEPSALRGGEDGVSVCNPWTGLSEKPVFGEDGGNRRRYHSEDFFDDIFRGDNS 122

Query: 121 LSSSPRICDRDPYSSSSPASRVLSPARP--------LPPKAEPSGISIHAEFSLPAKFTK 172
           +++SPR  D DP+SSS P SRVLSPA+P            + P+ +S     SLP+K T+
Sbjct: 123 VNTSPRGHDLDPFSSS-PGSRVLSPAQPLPPPQAEIFGSSSNPAQLST----SLPSKVTR 177

Query: 173 GMELPTFGLAPRSPYKSQDGTSNGINHHSSSLLRSSSLNLSREEG--NETRSSYRQSILS 230
            M+  +     R P     G SNG ++  S   R S+  +  ++G  N+   SYRQS LS
Sbjct: 178 AMDFHSL----REP-----GASNGSSYPYSPPSRFSNQTIQGQDGLKNDPWPSYRQSRLS 228

Query: 231 REFSLSNKDADTETVGN-----SKME--SNSSEVLTSGNLFHFSIYKWASKRVPFDMPLR 283
            EFSL+  ++   T  N       +E  SNSS+V  + +  HFS+YKWASK VPF  PLR
Sbjct: 229 HEFSLAGDESPKLTTSNRADMGDNLENGSNSSKVEINTSQSHFSLYKWASKGVPFVTPLR 288

Query: 284 EVNRSKSKENNDADKCSSSDGWVGGEK---ELPTETLHDTKLHLNVGVLADSESFRIEHN 340
            +N S++K  +  ++CSS++G    E+   ELP   +HD + H      A ++SF+I+  
Sbjct: 289 RLNSSRTKVKSKTERCSSTNGRFQSERMVSELPEAIMHDVEYHYTDDTSASTKSFKIDRE 348

Query: 341 KQNDTAPPDTSTENTVE----------TWPTADP---------GDATLENTGEETKSHSQ 381
           KQ + A     T++ +E            P  +P          DA L NT +E K +S 
Sbjct: 349 KQKNDALFTKITQDRLEECQIVEEVVLAIPNLEPLNKTHNRIEDDAVLSNTRKEGKPYSL 408

Query: 382 SEIGLHNELEK-VSVVAEEAHKPELKPLCSLFYNDHYERSNEEMNKNASEKESKVKCTKK 440
           SE GL  + EK +SV+A E   PELK L SL +     +  +++      KES +K TKK
Sbjct: 409 SETGLCGKAEKEISVLAHEVSNPELKSLRSLLHETDDGQGTDKVTGKDGGKESMLKTTKK 468

Query: 441 SSV--VPYFSKNKKKQDVKRECGEVGKGGLQGSPMNSKD-LCKTGVRGKVKEFVKIFNQE 497
           SSV  VP  +K ++++ +  +   V K   Q SP NS D L + GV+GKV+EFVK  NQE
Sbjct: 469 SSVDVVPENAKEQERKGIASDSALVDKASSQCSPRNSGDSLGRNGVKGKVREFVKKLNQE 528

Query: 498 GLSKSKINV---DPQSKSSRWKGTGNSKPEKDANFSKIAPDGKIHKSTEHEKKSFPDTPI 554
             SK   N    DP+S+SSR K  G+ + EK A+ S    D ++H    + KK  PD  I
Sbjct: 529 ASSKPITNSEPSDPRSQSSRRKNAGSFRAEKGAHVSATETDEQMHMDNANRKKMVPDASI 588

Query: 555 MVNGNLPHSEKQLAATNTTNHMSNGTPE-WKDSSSTASASEYLASPLNESGGNGSKETGD 613
           MV+ N    +++ +   T  H S+GT    KDS ++ S  +   + L            D
Sbjct: 589 MVDENPKQQQRRYSGLKTAIHKSSGTTYVQKDSLASVSIPDDSVAALR-----------D 637

Query: 614 IDKSFQGNSLVNQVTKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYIL 673
              SFQGN ++ +++++ +K  ++  D  E Q  D +IR+W +GKEGNIRSLLSTLQY+L
Sbjct: 638 RQDSFQGNFVIEELSQEQSKQPQIDEDHDEIQVSDAKIRQWLSGKEGNIRSLLSTLQYVL 697

Query: 674 WPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVL 726
           WP SGWKPVPLVDIIEGNAVKR+YQKALLCLHPDKLQQKGA   Q YIAEKV 
Sbjct: 698 WPESGWKPVPLVDIIEGNAVKRAYQKALLCLHPDKLQQKGAAVHQKYIAEKVF 750

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255538574|ref|XP_002510352.1| heat shock protein binding protein, putative [Ricinus communis] gi|223551053|gb|EEF52539.1| heat shock protein binding protein, putative [Ricinus communis]

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 348/801 (43%), Positives = 450/801 (56%), Gaps = 122/801 (15%)

Query: 1   MERFSQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSDIDFDDVFGGPPRRSSMHETRC 60
           ME+ S RES+LLGY PQR+  N   +SSP       + DIDF DVFGGPPRR+S+ ETRC
Sbjct: 1   MEKLSNRESILLGYSPQRNISNNLPTSSP------DSPDIDFHDVFGGPPRRASIQETRC 54

Query: 61  SYSPSEVTENDGFRGDDETVASRNSWNGVREKPVFGEEGMNRRRYPSENFFDDIFRGNGS 120
           S+      END       T + R+ W+G+ E+PVFGE+   RRRY S +FFDDIFR N S
Sbjct: 55  SFG-----ENDTDSYALTTSSHRHRWSGLSERPVFGEDSATRRRYTSHDFFDDIFRVNES 109

Query: 121 LSSSPRICDRDPYSSSSPASRVLSPARPLPPKA-EP-SGISIHAEFSLPAKFTKGMELPT 178
           LS+SPR  + D +SS+ P S+VLSP RPLPP+A EP    S+ A+FSLPAK  KG +LPT
Sbjct: 110 LSTSPRKNETDSFSSN-PGSKVLSPVRPLPPRAAEPFPSASLPAQFSLPAKLIKGTDLPT 168

Query: 179 FGLAPRSPYKSQDGTSNGINHHSSSLLR--SSSLNLSREEGNETRSSYRQSILSREFSLS 236
           FG + R+ +K++DG SN ++ ++ S L   SS  NL  E  ++    Y +S LSRE S++
Sbjct: 169 FGSSARNHHKNKDGNSNAMSSYAYSPLSRVSSQENLVEESRSDV---YIKSSLSREPSVN 225

Query: 237 NKDADTETV------GNSKMESNSSEVLTSGNLFHFSIYKWASKRVPFDMPLREVNRSKS 290
           + ++  E        GN K +S+ +   ++ N FHFSIYKWASK VP  +PLR  N SK 
Sbjct: 226 SLESSLEKPDEMDKGGNLKKDSSET---SNSNRFHFSIYKWASKGVPLALPLRGGNTSKL 282

Query: 291 KENNDADKCSSSDGWVGGE---KELPTETLHD------------------TKLHLN---- 325
           KE    ++ SS+ G V  E   KELPT T  D                  +++ L+    
Sbjct: 283 KEKVKLERSSSTSGRVACEGRAKELPTLTSQDIDRPSYTWSNCISTDAKSSEIELDKKER 342

Query: 326 -VGVLADSESFRIEHNKQNDTAPPDTSTENTVETWPTA--DPGDATLENTGEETKSHSQS 382
              ++  +   R+E  +  + A   +  EN      T     G+    ++  E K+HS  
Sbjct: 343 GFLLMTSTTHGRVEEGQTVEEAALKSEPENQRARQETVKDSAGNNIFRDSKGERKTHSVI 402

Query: 383 EIGLHNEL-EKVSVVAEEAHKPELKPLCSLFYNDHY-----------------ERSNEEM 424
           + G   +  EK+  V  E  + ELK L SL   D Y                  R++E  
Sbjct: 403 DTGKSGKRGEKIPEVTRETPETELKTLHSLMLGDDYGEGKTCSKSRLFASQVFSRADEIT 462

Query: 425 NKNASEKESKVKCTKKSSVVPYFSKNKKKQDVKREC---GEVGKGGLQGSPMNSKD-LCK 480
            KN   KESKVK TK+S+ V   S+  KKQ   R      E+ K  LQGSP  S   L K
Sbjct: 463 IKNEL-KESKVKSTKRSAAVFNVSEKVKKQVEARTILNGSEMDKANLQGSPKESNGGLTK 521

Query: 481 TGVRGKVKEFVKIFNQEGLSKSKINVDPQSKSS---RWKGTGNSKPEKDANFSKIAPDGK 537
              R KVKEFVKIFNQE   K   N D QS  S   RWK  G  KPE+D + +    D K
Sbjct: 522 NRGRQKVKEFVKIFNQEASGKPTFNSDSQSPQSQSSRWKERGKFKPEEDPSVAPTKLDDK 581

Query: 538 IHKSTEHEKKSFPDTPIMVNGNL---PHS----EKQLAATNTTNH----MSNGTPEWKDS 586
           +H               + NGN    PH+    EKQ + T + NH    +S+G    KD 
Sbjct: 582 VH---------------LPNGNKNHKPHASIRFEKQHSETRSHNHEPTDISSG---LKDK 623

Query: 587 SSTASASEYLASPLNESGGNGSKET-GDIDKSFQGNSLVNQVTKDDNKLRKLGNDPQEFQ 645
           S++ +AS            +GSK    D D SFQGN L+ ++ +D+N+L + G++ + FQ
Sbjct: 624 SASTAAS----------IPDGSKAVLEDPDDSFQGNILIKELPQDENELPQAGDNQEVFQ 673

Query: 646 AIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLH 705
            ID +IRKWS+GKEGNIRSLLSTLQY+LWP SGWKPVPLVDIIEGNAVKRSYQKALL LH
Sbjct: 674 DIDTKIRKWSDGKEGNIRSLLSTLQYVLWPESGWKPVPLVDIIEGNAVKRSYQKALLTLH 733

Query: 706 PDKLQQKGATCQQTYIAEKVL 726
           PDKLQQKGAT  Q YIAEKV 
Sbjct: 734 PDKLQQKGATSHQKYIAEKVF 754

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449460161|ref|XP_004147814.1| PREDICTED: uncharacterized protein LOC101211029 [Cucumis sativus]

 Score =  370 bits (950), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 306/769 (39%), Positives = 415/769 (53%), Gaps = 86/769 (11%)

Query: 1   MERFSQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSD-IDFDDVFGGPPRR-SSMHET 58
           M+  SQR+S+LLGY  QRS  N   SSSP+  A+  NSD +DF DVFGGPPRR SS+HET
Sbjct: 1   MDNLSQRDSILLGYSLQRSSAN---SSSPR--ASNRNSDDVDFHDVFGGPPRRRSSVHET 55

Query: 59  RCSYSPSEVTENDGFR---GDDETVASRNS-WNGVREKPVFGEEGMNRRRYPSENFFDDI 114
           R S+S +     D F    G+DE +  R+  W+G+ EKPVFGEEG++ RR+PS++F+DDI
Sbjct: 56  RYSFSET----GDSFALKGGEDEALPGRSGPWSGLNEKPVFGEEGVHGRRFPSDDFYDDI 111

Query: 115 FRGNGSLSSSPRICDRDPYSSSSPASRVLSPARPLPPKAEPSGIS-IHAEFSLPAKFTKG 173
           F+G+ S++SSPR  D     S +P SRVLSPARPLPP AEP G S + A+ SLP++  KG
Sbjct: 112 FKGDESVNSSPRRGD---IFSPNPGSRVLSPARPLPPPAEPFGSSSLPAQLSLPSRLAKG 168

Query: 174 MELPTFGLAPRSPYKSQDGTSNGINHHSSSL-LRSSSLNLSREEGNETRSSY----RQSI 228
            +LP FG    S  +++D  SNG + +S    L   S + S     + ++ Y    R  +
Sbjct: 169 TDLPAFG---SSSLRNKDSVSNGSHTNSPRFTLSRFSFSTSSHRFEDPKTDYDLSDRTGV 225

Query: 229 LSREFSLSNKDADTETV-------GNS--KMESNSSEVLTSGNLF--HFSIYKWASKRVP 277
           L  EF  ++ D     +       GNS  K E +S E    G  F  HFSIYKWASK VP
Sbjct: 226 LPSEFQENDGDEALSFINSGNGLSGNSLTKGEEDSLEESNGGGQFQFHFSIYKWASKGVP 285

Query: 278 FDMPLREVNRSKSKENNDADKCSSS-DGWVGGEKEL--PTETLHDTKLHLNVGVLADSES 334
             MP R  N  + +E     K SSS D  V  + E+  PT T+ +  +          E+
Sbjct: 286 LMMPSRG-NGPRLREKTLLRKSSSSTDRLVKAKNEMHSPTSTIQNIDISPVF-----HET 339

Query: 335 FRIEHNKQNDTAPPD----------TSTENTVETWPTADPGDATLENTGEETKSHS-QSE 383
            +++  K  D  P            T ++N          G   +    E+ K HS   +
Sbjct: 340 TKVDDEKGIDILPDTGNLDQRQSSFTPSKNLSRQSSRTAVGSDNISRPTEKEKPHSLPKK 399

Query: 384 IGLHNELEKVSVVAEEAHKPELKPLCSLFYNDHYERSNEEMNKNASEKESKVKCTKKSSV 443
           +      +K++    E  K E K L S       E+S E + K   + E   K   KSS 
Sbjct: 400 VSSEKPAKKMTSRTIEDQKHEAKSLSSFLLYSDSEQSEERITKEYRKGEIMAKGDMKSSN 459

Query: 444 VPYFSKNKK--KQDVKRECGEVGKGGLQGSPMNS-KDLCKTGVRGKVKEFVKIFNQEGLS 500
           +   S  KK  KQ   R   +V K  +  S + S  ++ +  V GK+ EFVK+FNQE  S
Sbjct: 460 LSDLSSPKKLEKQTSLRNS-KVKKPTVPSSDVESGHNIGRKKVGGKISEFVKLFNQEPTS 518

Query: 501 KSKINVDPQSKSSRWKGTGNSKPEKDANFSKIAPDGK--IHKSTEHEKKSFPDTPIMVNG 558
           K +  VD ++ SS  K    S+P K    +KI  D K  ++K+T+   K           
Sbjct: 519 KPQDVVDLENDSSTMKQ--ESEP-KGPTVNKIRKDEKPKLNKNTDASIK---------GD 566

Query: 559 NLPHSEKQLAATNTTNHMSNGTPEWKDSSSTASASEYLASPLNESGGNGSKET-GDIDKS 617
           N+  SEK +   +T    S     +K++   AS+ E   +P      N +K T  ++++ 
Sbjct: 567 NI--SEKSVDDNSTKKAAS-----FKNN--FASSKESSPAPNTVHVPNVTKSTVSEVEEP 617

Query: 618 FQGNSLVNQVTKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPAS 677
           FQ N  V ++ +D     +  N  +E QA+D +IR+WS+GKEGNIRSLLSTLQY+LWP S
Sbjct: 618 FQDNFSVQELPQDYEDSTETNNGREEVQALDTKIRQWSSGKEGNIRSLLSTLQYVLWPKS 677

Query: 678 GWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVL 726
           GWK VPLVDIIEGNAVKRSYQKALL LHPDKLQQKGA+  Q YIA KV 
Sbjct: 678 GWKAVPLVDIIEGNAVKRSYQKALLYLHPDKLQQKGASSDQKYIAAKVF 726

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356518054|ref|XP_003527699.1| PREDICTED: uncharacterized protein LOC100820241 [Glycine max]

 Score =  349 bits (896), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 281/770 (36%), Positives = 393/770 (51%), Gaps = 153/770 (19%)

Query: 1   MERF--SQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSDIDFDDVFGGPPRRSSMHET 58
           MERF  SQRES+LLGY     ++N   S  P+ +++  NS++DF DVFGGPPRRSS++E 
Sbjct: 1   MERFYSSQRESLLLGYN--NDYIN---SLIPRSSSSDSNSEVDFTDVFGGPPRRSSVNEA 55

Query: 59  RCSYSPSEVTENDGFRGDDETVASRNSWNGVREKPVFGEEGMNRRRYPS---ENFFDDIF 115
           R +    E++E +G RG          W   REKPVFGE+  NRRR+P+    +FFDDIF
Sbjct: 56  RQTVG--ELSEEEGERG-------WCRWPPEREKPVFGEDSGNRRRHPTNKNSDFFDDIF 106

Query: 116 RG--NGSLSSSPRICDRDPYSSSSPASRVLSPARPLPPKAEPSGISIHAEFSLPAKFTKG 173
            G  +GS+ S+P+    D ++     SRV SP    P      G S+ A FSLPAK T G
Sbjct: 107 GGEASGSVCSTPKKRVGDAFA----LSRVSSPLPLPPAADPVVG-SLPATFSLPAKLTNG 161

Query: 174 MELPTFGLAPRSPYKSQDGTSNGINHHSSSLLRSSSLNLSREEGNETRSSYRQSILSREF 233
           ++LPTFG + R+           +++ +  ++ S+ L             YRQS+LS+EF
Sbjct: 162 VDLPTFGSSTRN---------RNLSNINDGIVASNGLK-----------PYRQSLLSQEF 201

Query: 234 SLSNKD--ADTETVGNSKMESNSSEVLTSGNLFHFSIYKWASKRVPFDMPLREVNRSKSK 291
           S S+    AD  ++    +  +      S   FHFSIYKWASK VP  MPLR    S++K
Sbjct: 202 SNSSTSDKADKGSIMKQNISISEGSPGASNGQFHFSIYKWASKGVPMVMPLRTERNSRNK 261

Query: 292 ENNDADKCSSSDGWVGGEKELPTETLHDTKLHLNVGVLADSESFRIEHNKQNDTAPPDTS 351
           +    ++CSS+  W+       +E      +  N   L         +N++ D     T 
Sbjct: 262 DKAKLERCSSAKEWI------VSEITTQNPIEYNGSPLM--------NNRKQDVPTTSTP 307

Query: 352 TEN------TVETWPTA---------------DPGDATLENTGEETKSHSQS--EIGLHN 388
           TEN       VE   +A               D   +++ +   E +S ++S  EIG   
Sbjct: 308 TENGSDSNQIVEQIVSAKTQSDKSSSPQTITKDVPTSSISHDAREVESSTRSTGEIGFSG 367

Query: 389 ELEKVSVVAEEAHKPELKPLCSLFYNDHYERSNEEMNKNASEKESKVKCTKKSSVVPYFS 448
           + E     A+E  K E KPL  LF     ++ N+E      E E+++K +KK S V   +
Sbjct: 368 KTE----AAKETQKREPKPLQFLFKESDKKQDNDETITRERE-ENRMKSSKKLSAVFDVT 422

Query: 449 KNKKKQDVK----RECGEVGKGGLQGSPMNSKDLCKTGVRGKVKEFVKIFNQEGLSKSKI 504
            N  KQ+ K    R+ G   K   QGS    +++ K  V+GKVKEF +IFNQE ++K K 
Sbjct: 423 VNPIKQEEKTVPLRDVGR-SKAISQGSVSLGENMGKGLVKGKVKEFARIFNQEAVTKPKF 481

Query: 505 NVDPQSKSSRWKGTGNSKPEKDANFSKIAPDGKIHKSTEHEKKSFPDTPIMVNGNLPHSE 564
           + + +S+ S +K     + + +                             V G    S+
Sbjct: 482 DSNSRSQGSTYKKREALRAKNE-----------------------------VEGGPEQSK 512

Query: 565 KQLAATNTTNHMSN--------GTPEWKDSSSTASASEYLASPLNESGGNGSKETGDIDK 616
           K  +AT TTN  +N          PE  D S T                      GD D+
Sbjct: 513 KYNSATETTNISANILSHEEDISEPEIPDISFTV--------------------IGDKDE 552

Query: 617 SFQGNSLVNQVTKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPA 676
           SF G+ ++  + +D++++ +   + QE Q ID +I++WS GKEGNIRSLLSTLQY+LWP 
Sbjct: 553 SFHGSFMIQVLAQDEDEVLQ-NQENQEIQTIDNKIKQWSKGKEGNIRSLLSTLQYVLWPE 611

Query: 677 SGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVL 726
            GWK VPLVDIIEGNAVKRSYQ+ALLCLHPDKLQQKGA+  Q YIAEKV 
Sbjct: 612 CGWKYVPLVDIIEGNAVKRSYQRALLCLHPDKLQQKGASSDQKYIAEKVF 661

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449477022|ref|XP_004154905.1| PREDICTED: uncharacterized protein LOC101230998 [Cucumis sativus]

 Score =  336 bits (861), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 283/762 (37%), Positives = 377/762 (49%), Gaps = 149/762 (19%)

Query: 1   MERFSQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSD-IDFDDVFGGPPRR-SSMHET 58
           M+  SQR+S+LLGY  QRS  N   SSSP+  A+  NSD +DF DVFGGPPRR SS+HET
Sbjct: 1   MDNLSQRDSILLGYSLQRSSAN---SSSPR--ASNRNSDDVDFHDVFGGPPRRRSSVHET 55

Query: 59  RCSYSPSEVTENDGFRG-DDETVASRNS-WNGVREKPVFGEEGMNRRRYPSENFFDDIFR 116
           R S+S  E   +   +G +DE +  R+  W+G+ EKPVFGEEG++ RR+PS++F+DDIF+
Sbjct: 56  RYSFS--ETGNSFALKGGEDEALPGRSGPWSGLNEKPVFGEEGVHGRRFPSDDFYDDIFK 113

Query: 117 GNGSLSSSPRICDRDPYSSSSPASRVLSPARPLPPKAEPSGIS-IHAEFSLPAKFTKGME 175
           G+ S++SSPR  D     S +P SRVLSPARPLPP AEP G S + A+ SLP++  KG +
Sbjct: 114 GDESVNSSPRRGD---IFSPNPGSRVLSPARPLPPPAEPFGSSSLPAQLSLPSRLAKGTD 170

Query: 176 LPTFGLAPRSPYKSQDGTSNGINHHSSSL-LRSSSLNLSREEGNETRSSY----RQSILS 230
           LP FG    S  +++D  SNG + +S    L   S + S     + ++ Y    R  +L 
Sbjct: 171 LPAFG---SSSLRNKDSVSNGSHTNSPRFTLSRFSFSTSSHRFEDPKTDYDLSDRTGVLP 227

Query: 231 REFSLSNKDADTETV-------GNS--KMESNSSEVLTSGNLF--HFSIYKWASKRVPFD 279
            EF  ++ D     +       GNS  K E +S E    G  F  HFSIYKWASK VP  
Sbjct: 228 SEFQENDGDEALSFIKSGNGLSGNSLTKGEEDSLEESNGGGQFQFHFSIYKWASKGVPLM 287

Query: 280 MPLREVNRSKSKENNDADKCSSS-DGWVGGEKEL--PTETLHDTKLHLNVGVLADS-ESF 335
           MP R  N S+ +E     K SSS D  V  + E+  PT T+       N+ +   S E+ 
Sbjct: 288 MPSRG-NGSRLREKTLLRKSSSSTDRLVKAKNEMHSPTSTIQ------NIDIPPVSHETT 340

Query: 336 RIEHNKQNDTAPPD----------TSTENTVETWPTADPGDATLENTGEETKSHSQ-SEI 384
           +++  K  D  P            T ++N          G   +    E+ K HS   ++
Sbjct: 341 KVDDEKGIDILPDTGNLDQRQSSFTPSKNLSRQSSRTAVGSDNISRPTEKEKPHSLPKKV 400

Query: 385 GLHNELEKVSVVAEEAHKPELKPLCSLFYNDHYERSNEEMNKNASEKESKVKCTKKSSVV 444
                 +K++    E  K E K L S       E+S E + K                  
Sbjct: 401 SSEKPEKKMTSWTIEDQKHEAKSLSSFLLYSDSEQSEERITK------------------ 442

Query: 445 PYFSKNKKKQDVKRECGEVGKGGLQGSPMNSKDLCKTGVRGKVKEFVKIFNQEGLSKSKI 504
                            E  KG +                   KEFVK+FNQE  SK + 
Sbjct: 443 -----------------EYRKGEIMA-----------------KEFVKLFNQEPTSKPQD 468

Query: 505 NVDPQSKSSRWKGTGNSKPEKDANFSKIAPDGKIHKSTEHEKKSFPDTPIMVNGNLPHSE 564
            VD ++ SS  K    S+P K    +KI  D K                       P   
Sbjct: 469 VVDLENDSSTMK--QESEP-KGPTVNKIRKDEK-----------------------PKLN 502

Query: 565 KQLAATNTTNHMSNGTPEWKDSSSTASASEYLASPLNESGGNGSKETGDIDKSFQGNSLV 624
           K   A+   +++S  + +   +   AS    L  P                +  Q  + V
Sbjct: 503 KNTDASIKGDNISEKSVDDNSTKKAASLKITLLLP---------------KRVVQLQTQV 547

Query: 625 NQVTKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPL 684
            ++ +D     +  N  +E QA+D +IR+WS+GKEGNIRSLLSTLQY+LWP SGWK VPL
Sbjct: 548 QELPQDYEDSTETNNGREEVQALDTKIRQWSSGKEGNIRSLLSTLQYVLWPKSGWKAVPL 607

Query: 685 VDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVL 726
           VDIIEGNAVKRSYQKALL LHPDKLQQKGA+  Q YIA KV 
Sbjct: 608 VDIIEGNAVKRSYQKALLYLHPDKLQQKGASSDQKYIAAKVF 649

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224067383|ref|XP_002302477.1| predicted protein [Populus trichocarpa] gi|222844203|gb|EEE81750.1| predicted protein [Populus trichocarpa]

 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 180/355 (50%), Positives = 231/355 (65%), Gaps = 34/355 (9%)

Query: 1   MERFSQRESVLLGYGPQRSFMNEHSSSSPKPTAAGGNSDIDFDDVFGGPPRRSSMHETRC 60
           MERFSQRESVLLGY  QR F+N HS SSP+  +  GNSDIDF DVFGGPPRRSS+ E R 
Sbjct: 1   MERFSQRESVLLGYNFQRPFIN-HSGSSPE--SQYGNSDIDFTDVFGGPPRRSSLQEVR- 56

Query: 61  SYSPSEVTENDGF---RGDDETVASRNSWNGVREKPVFGEEGMNRRRYPSENFFDDIFRG 117
            YS SE T  D F    GD +T  SR+S +G+ +KPVFG+E +NRRRYP++ FF DIFR 
Sbjct: 57  -YSFSETT--DSFASTSGDVDTKLSRHSLSGLNDKPVFGDENVNRRRYPNDGFFGDIFRD 113

Query: 118 NGSLSSSPRICDRDPYSSSSPASRVLSPARPLPPKAEPSGISIHAEFSLPAKFTKGMELP 177
           + SLSSSPR  DRD  SS+   SRVLSPA  LP +A+P   S+ A+FSLPAK  KG +LP
Sbjct: 114 SESLSSSPRKHDRDSLSSTR-GSRVLSPAELLPHRADPWSPSLPAQFSLPAKLIKGTDLP 172

Query: 178 TFGLAPRSPYKSQDGTSNGI-NHHSSSLLRSSSL-NLSREEGNETRSSYRQSILSREFSL 235
           TF  + R  +K++DG SNGI N+  S L RS+SL NL R+E   T     QS LS+E SL
Sbjct: 173 TFISSARDHHKNKDGASNGISNYTYSPLSRSASLTNLVRDE--LTNDVSWQSALSKEPSL 230

Query: 236 SNKDA-------DTETVGNSKMESNSSEVLTSGNLFHFSIYKWASKRVPFDMPLREVNRS 288
            ++++       +T+   N K +S+ SE+ T+ N FHFSIYKWA+K +PF MPLR  N+S
Sbjct: 231 CSEESSNVTKPEETDKSRNLKRDSDGSEIPTNRNQFHFSIYKWATKGLPFAMPLRGANKS 290

Query: 289 KSKENNDADKCSSSDGWVGGE---KELPTETLHD---------TKLHLNVGVLAD 331
           +  E     +CSS++GW   E   +EL +   HD           L+LN+ V+ +
Sbjct: 291 RLNEKCKLQRCSSTNGWAAYEGLARELRSAIPHDIDYSLIQTQVSLYLNLQVIVE 345

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356510239|ref|XP_003523847.1| PREDICTED: uncharacterized protein LOC100820002 [Glycine max]

 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/309 (42%), Positives = 172/309 (55%), Gaps = 63/309 (20%)

Query: 430 EKESKVKCTKKSSVVPYFSKNKKKQDVK----RECGEVGKGGLQGSPMNSKDLCKTGVRG 485
           E+   +K TKKSS V   + N  KQ+ K    R+ G   K   QGS    ++L K  V+G
Sbjct: 7   EENRMMKSTKKSSAVFDVTVNPMKQEEKAVPLRDVGR-SKATSQGSVSLGENLGKGLVKG 65

Query: 486 KVKEFVKIFNQEGLSKSKINVDPQSKSSRWKGTGNSKPEKDANFSKIAPDGKIHKSTEHE 545
           KVKEF +IFNQE ++K K++   Q + S +K       ++DA              T++E
Sbjct: 66  KVKEFARIFNQEAVNKPKVDSKSQPQGSTYK-------KRDA------------LRTKNE 106

Query: 546 KKSFPDTPIMVNGNLPHSEKQLAATNTTNHMSNGT--------PEWKDSSSTASASEYLA 597
            ++ P+ P          +K  + T TTN  +N          PE  D S T        
Sbjct: 107 VEAGPEQP----------KKDNSVTETTNISANNLFHQDDISEPEIPDISFTV------- 149

Query: 598 SPLNESGGNGSKETGDIDKSFQGNSLVNQVTKDDNKLRKLGNDPQEFQAIDVQIRKWSNG 657
                         GD D+SF G+ ++  + +D+ ++ +   + QE Q ID +I++WS G
Sbjct: 150 -------------IGDKDESFPGSFMIQVLAQDEGEVLQTQKN-QEIQTIDNKIKQWSKG 195

Query: 658 KEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQ 717
           KEGNIRSLLSTLQY+LWP  GWKPVPLVDIIEGNAVKRSYQ+ALLCLHPDKLQQKGA+  
Sbjct: 196 KEGNIRSLLSTLQYVLWPECGWKPVPLVDIIEGNAVKRSYQRALLCLHPDKLQQKGASSD 255

Query: 718 QTYIAEKVL 726
           Q YIAEKV 
Sbjct: 256 QKYIAEKVF 264

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18410769|ref|NP_565101.1| J-domain protein required for chloroplast accumulation response 1 [Arabidopsis thaliana] gi|12323895|gb|AAG51921.1|AC013258_15 unknown protein; 9598-12259 [Arabidopsis thaliana] gi|15982795|gb|AAL09745.1| At1g75100/F9E10_5 [Arabidopsis thaliana] gi|21655287|gb|AAM65355.1| At1g75100/F9E10_5 [Arabidopsis thaliana] gi|74267412|dbj|BAE44203.1| auxilin-like J-domain protein [Arabidopsis thaliana] gi|332197551|gb|AEE35672.1| J-domain protein required for chloroplast accumulation response 1 [Arabidopsis thaliana]

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 134/343 (39%), Positives = 192/343 (55%), Gaps = 59/343 (17%)

Query: 405 LKPLCSLFYNDHYERSNEEMNKNASEKESKVKCTKKSSVVPYFSKNKKKQDVKRECGEVG 464
           +KPL S+F+ +  ER +E++    SE+E +   +K  +   +   ++ K   K+  G   
Sbjct: 331 VKPLHSIFHEED-ERQDEKI---VSEREVRKGKSKAKNTRSFTEDSRTK---KKSQGT-- 381

Query: 465 KGGLQGSPMNSK----------DLCKTGVRGKVKEFVKIFNQEGLSKSKINVDPQS--KS 512
           K  L  SP+  K          ++ K GV+GKV +FVKIF++ G S   +    +S  +S
Sbjct: 382 KSSLDSSPIPDKSSFASSSAAPEVGKDGVKGKVSDFVKIFSK-GAS---VGAGGESLGQS 437

Query: 513 SRWKGTGNSKPEKDANFSKIAPDGKIHKST----EHEKKSFPDTPIMVNGNLPH--SEKQ 566
           SRW+        K+   + I  DG   K T    + +KKS PD P M     P   ++K+
Sbjct: 438 SRWRA-------KETPKTDIIHDGSNAKETVNIPDQQKKSTPDIPAMNRDQKPSQSTQKK 490

Query: 567 LAATNTTNHMSNG---TPEWKDSSSTASASEYLASPLNESGGNGSKETGDIDKSFQGNSL 623
            +   + N+ + G     E ++ S+T + SE                  DID+ F  N  
Sbjct: 491 DSDRESMNYKAPGDTVQEERQEPSTTHTTSE------------------DIDEPFHVNFD 532

Query: 624 VNQVTKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVP 683
           V  +T+D+NK+ +   D +E + ID +IRKWS+GK GNIRSLLSTLQYILW  SGWKPVP
Sbjct: 533 VEDITQDENKMEEANKDAEEIKNIDAKIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVP 592

Query: 684 LVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVL 726
           L+D+IEGNAV++SYQ+ALL LHPDKLQQKGA+  Q Y+AEKV 
Sbjct: 593 LMDMIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVF 635

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842251|ref|XP_002889007.1| J-domain protein required for chloroplast accumulation response 1 [Arabidopsis lyrata subsp. lyrata] gi|297334848|gb|EFH65266.1| J-domain protein required for chloroplast accumulation response 1 [Arabidopsis lyrata subsp. lyrata]

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/262 (42%), Positives = 157/262 (59%), Gaps = 33/262 (12%)

Query: 477 DLCKTGVRGKVKEFVKIFNQEGLSKSKINVDPQS--KSSRWKGTGNSKPEKDANFSKIAP 534
           ++ K GV+GKV +FVKIF++ G S   +    +S  +SSRW+      P+ D N      
Sbjct: 400 EVGKDGVKGKVSDFVKIFSK-GAS---VGAGGESLGQSSRWRA--KETPKTDINHDAANA 453

Query: 535 DGKIHKSTEHEKKSFPDTPIMVNGNLPH--SEKQLAATNTTNHMSNGTP---EWKDSSST 589
              ++   + +KKS PD P M   + P   ++K+ +   + N+ + G     E ++ S+T
Sbjct: 454 KDTVN-IPDQQKKSTPDIPAMNRDSKPSHATQKKDSDRESMNYKAPGVTVQEERQEPSTT 512

Query: 590 ASASEYLASPLNESGGNGSKETGDIDKSFQGNSLVNQVTKDDN-KLRKLGNDPQEFQAID 648
            + SE                  DID+ F  N  V  +T+D+N K+ +   D +E + ID
Sbjct: 513 HTTSE------------------DIDEPFHVNFDVEDITQDENNKMEETNKDAEEIKKID 554

Query: 649 VQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDK 708
            +IRKWS+GK GNIRSLLSTLQYILW  SGWKPVPL+D+IEGNAV++SYQ+ALL LHPDK
Sbjct: 555 AKIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVPLMDMIEGNAVRKSYQRALLILHPDK 614

Query: 709 LQQKGATCQQTYIAEKVLIFCR 730
           LQQKGA+  Q Y+AEKV  F +
Sbjct: 615 LQQKGASANQKYMAEKVFEFLQ 636

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	743
TAIR|locus:2037256	651	JAC1 "J-domain protein require	0.262	0.299	0.461	2.3e-53
TAIR|locus:2135763	891	AT4G12770 [Arabidopsis thalian	0.106	0.088	0.670	2.2e-25
TAIR|locus:2135778	904	AT4G12780 [Arabidopsis thalian	0.106	0.087	0.645	2.7e-23
TAIR|locus:2009817	455	AT1G30280 [Arabidopsis thalian	0.164	0.268	0.395	1.7e-22
TAIR|locus:2115245	1422	AT4G36520 [Arabidopsis thalian	0.236	0.123	0.375	1.8e-21
TAIR|locus:2018462	1448	AUL1 "AT1G75310" [Arabidopsis	0.215	0.110	0.374	2.5e-21
TAIR|locus:2036967	523	AT1G21660 [Arabidopsis thalian	0.149	0.212	0.465	1.4e-19
UNIPROTKB|G4NGN1	907	MGG_04080 "Uncharacterized pro	0.092	0.076	0.434	4.6e-09
UNIPROTKB|F1NL76	1265	Gga.54538 "Uncharacterized pro	0.090	0.052	0.426	8.5e-09
UNIPROTKB|F1NC57	1266	Gga.54538 "Uncharacterized pro	0.090	0.052	0.426	8.5e-09

TAIR|locus:2037256 JAC1 "J-domain protein required for chloroplast accumulation response 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 420 (152.9 bits), Expect = 2.3e-53, Sum P(3) = 2.3e-53
 Identities = 101/219 (46%), Positives = 128/219 (58%)

Query:   511 KSSRWKGTGNSKPEKDANFSKIAPDGKIHKST----EHEKKSFPDTPIMVNGNLPHSEKQ 566
             +SSRW+      P+ D     I  DG   K T    + +KKS PD P M     P    Q
Sbjct:   436 QSSRWRA--KETPKTD-----IIHDGSNAKETVNIPDQQKKSTPDIPAMNRDQKPSQSTQ 488

Query:   567 LAATNTTNHMSNGTPEWKDSSSTASASEYLASPLNESGGNGSKETGDIDKSFQGNSLVNQ 626
                 ++     N    +K    T    E    P   S  + + E  DID+ F  N  V  
Sbjct:   489 --KKDSDRESMN----YKAPGDTVQ--EERQEP---STTHTTSE--DIDEPFHVNFDVED 535

Query:   627 VTKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVD 686
             +T+D+NK+ +   D +E + ID +IRKWS+GK GNIRSLLSTLQYILW  SGWKPVPL+D
Sbjct:   536 ITQDENKMEEANKDAEEIKNIDAKIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVPLMD 595

Query:   687 IIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKV 725
             +IEGNAV++SYQ+ALL LHPDKLQQKGA+  Q Y+AEKV
Sbjct:   596 MIEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKV 634

GO:0009507 "chloroplast" evidence=ISM

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0009903 "chloroplast avoidance movement" evidence=IMP

GO:0009904 "chloroplast accumulation movement" evidence=IMP

GO:0071483 "cellular response to blue light" evidence=IMP

GO:0007015 "actin filament organization" evidence=IMP

TAIR|locus:2135763 AT4G12770 [Arabidopsis thaliana (taxid:3702)]

 Score = 303 (111.7 bits), Expect = 2.2e-25, Sum P(3) = 2.2e-25
 Identities = 53/79 (67%), Positives = 66/79 (83%)

Query:   647 IDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHP 706
             +DV+IR+W  GKEGN+R+LLSTLQY+LWP  GW+PV L D+I G +VK+ Y+KA LC+HP
Sbjct:   796 LDVEIRRWGAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITGASVKKVYRKATLCIHP 855

Query:   707 DKLQQKGATCQQTYIAEKV 725
             DK+QQKGA  QQ YIAEKV
Sbjct:   856 DKVQQKGANLQQKYIAEKV 874

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2135778 AT4G12780 [Arabidopsis thaliana (taxid:3702)]

 Score = 294 (108.6 bits), Expect = 2.7e-23, Sum P(3) = 2.7e-23
 Identities = 51/79 (64%), Positives = 65/79 (82%)

Query:   647 IDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHP 706
             +DV+I++W  GKEGN+R+LLSTLQY+LWP  GW+PV L D+I   +VK+ Y+KA LC+HP
Sbjct:   809 LDVEIKRWGAGKEGNLRALLSTLQYVLWPECGWQPVSLTDLITAASVKKVYRKATLCIHP 868

Query:   707 DKLQQKGATCQQTYIAEKV 725
             DK+QQKGA  QQ YIAEKV
Sbjct:   869 DKVQQKGANLQQKYIAEKV 887

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2009817 AT1G30280 [Arabidopsis thaliana (taxid:3702)]

 Score = 236 (88.1 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
 Identities = 53/134 (39%), Positives = 79/134 (58%)

Query:   604 GGNGSKETGDIDKSF---QGNSL---VNQVTKDDNKLRKLGNDPQ-----EFQAIDVQIR 652
             GG G+ ++ D+D++    +  S      Q  +D    R+   +P+     E +  D +IR
Sbjct:   303 GGGGNSDSNDMDEAIAWAKERSQRPEAKQTEEDVIDSRRSEEEPKSEEEMEMEMKDEEIR 362

Query:   653 KWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQK 712
              W  GKE NIR LLSTL ++LW  S W  +PL ++ +G+ VK++YQ+A LCLHPDKLQQ+
Sbjct:   363 IWLTGKETNIRLLLSTLHHVLWSNSNWDSIPLANLRDGSQVKKAYQRARLCLHPDKLQQR 422

Query:   713 GATCQ-QTYIAEKV 725
             G T   Q  +A +V
Sbjct:   423 GGTSPIQKSVASRV 436

GO:0005737 "cytoplasm" evidence=ISM

GO:0031072 "heat shock protein binding" evidence=IEA

TAIR|locus:2115245 AT4G36520 [Arabidopsis thaliana (taxid:3702)]

 Score = 295 (108.9 bits), Expect = 1.8e-21, Sum P(4) = 1.8e-21
 Identities = 71/189 (37%), Positives = 106/189 (56%)

Query:   540 KSTEHEKKSFPDTPIMVNGNL-PHSEKQLAATNTTNHMSNGTPEWKDSSSTASAS-EYLA 597
             ++ E  ++S  D     +G      E  L+     N +S G   ++DS  T   S +   
Sbjct:  1228 EARERMERSVSDKQSQSSGFFGERMEISLSDKQFQNSVSFGASRYQDSHGTEGESPQRYT 1287

Query:   598 SPLNESGGNGSKETGD-IDKSFQGNSLVNQVTKDDNKLRKLGNDPQEFQAIDVQIRKWSN 656
             S L        + T D + K+    ++ + V +     R+     +  + +D ++++WS+
Sbjct:  1288 SRLERH-----QRTADRVAKALAEKNMRDLVAQ-----REQAERIRIAETLDTEVKRWSS 1337

Query:   657 GKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATC 716
             GKEGNIR+LLSTLQYIL P SGW+P+PL ++I   AVKR+Y+KA LC+HPDKLQQ+GA  
Sbjct:  1338 GKEGNIRALLSTLQYILGPESGWQPLPLTEVITSAAVKRAYRKATLCVHPDKLQQRGANI 1397

Query:   717 QQTYIAEKV 725
              Q YI EKV
Sbjct:  1398 HQKYICEKV 1406

GO:0031072 "heat shock protein binding" evidence=IEA

TAIR|locus:2018462 AUL1 "AT1G75310" [Arabidopsis thaliana (taxid:3702)]

 Score = 291 (107.5 bits), Expect = 2.5e-21, Sum P(3) = 2.5e-21
 Identities = 67/179 (37%), Positives = 104/179 (58%)

Query:   564 EKQLAATNTTNHMSN--GTPEWKDSSSTASASEYLASPLNESGG--NGSKETGDIDKSFQ 619
             EK L+  +  +   +  G+  +  S     +S   +   N+S G  N S +TG+  +  +
Sbjct:  1256 EKALSGKSAASQAKSYGGSKSFSSSGERRGSSS--SGTENKSSGPSNSSNQTGEPIQRCK 1313

Query:   620 GNSLVNQVTKD-------DNKLRKLGNDPQEFQ------AIDVQIRKWSNGKEGNIRSLL 666
               S  +Q T D       + KLR L    ++ +      A+D  +++WS+GKE N+R+L+
Sbjct:  1314 ARSERHQRTSDRAAEALAEKKLRDLKTQKEQTERNRLAEALDADVKRWSSGKENNLRALI 1373

Query:   667 STLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKV 725
             STLQYIL   SGWKP+PL D++   +V+++Y+KA L +HPDKLQQ+GA+ QQ YI EKV
Sbjct:  1374 STLQYILGAESGWKPIPLTDLVSSASVRKAYRKATLYVHPDKLQQRGASTQQKYICEKV 1432

GO:0006457 "protein folding" evidence=ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0031072 "heat shock protein binding" evidence=IEA

TAIR|locus:2036967 AT1G21660 [Arabidopsis thaliana (taxid:3702)]

 Score = 269 (99.8 bits), Expect = 1.4e-19, Sum P(3) = 1.4e-19
 Identities = 54/116 (46%), Positives = 74/116 (63%)

Query:   615 DKSFQGNSLVNQVTKDDNKLRKLGNDPQE-----FQAIDVQIRKWSNGKEGNIRSLLSTL 669
             D+  +  S V Q   D N         QE      + +D +IR+W+ GKEGN+R+LLS+L
Sbjct:   391 DREQRTKSRVAQAVADMNNRDHQSRIEQEQRTRISETVDTEIRRWATGKEGNMRALLSSL 450

Query:   670 QYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKV 725
               +LWP  GW+ V + D+I  +AVK+ Y+KA L +HPDK+QQKGAT +Q YIAEKV
Sbjct:   451 HIVLWPGCGWEAVSITDLITSSAVKKVYRKATLYVHPDKVQQKGATLEQKYIAEKV 506

GO:0005634 "nucleus" evidence=ISM

GO:0031072 "heat shock protein binding" evidence=IEA

UNIPROTKB|G4NGN1 MGG_04080 "Uncharacterized protein" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 168 (64.2 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
 Identities = 30/69 (43%), Positives = 43/69 (62%)

Query:   647 IDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHP 706
             +D +I  W +GK  N+R+LL +L  +LW  SGWK V L +++  N VK  Y KA+   HP
Sbjct:   813 VDARIAAWRDGKRDNLRALLGSLDQVLWEGSGWKKVGLHELVVANKVKIIYMKAIAKCHP 872

Query:   707 DKLQQKGAT 715
             DK+ Q  +T
Sbjct:   873 DKIAQDAST 881

GO:0008150 "biological_process" evidence=ND

GO:0043581 "mycelium development" evidence=IEP

UNIPROTKB|F1NL76 Gga.54538 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 164 (62.8 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
 Identities = 29/68 (42%), Positives = 45/68 (66%)

Query:   642 QEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASG-WKPVPLVDIIEGNAVKRSYQKA 700
             ++   + ++I +W  GKE NIR+L+STL  +LW     WKPV + D++    VK+ Y+KA
Sbjct:  1165 KDMDPLKLKILEWIEGKERNIRALISTLHTVLWEGENKWKPVSMADLVTPEQVKKYYRKA 1224

Query:   701 LLCLHPDK 708
             +L +HPDK
Sbjct:  1225 VLVVHPDK 1232

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1NC57 Gga.54538 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 164 (62.8 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
 Identities = 29/68 (42%), Positives = 45/68 (66%)

Query:   642 QEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASG-WKPVPLVDIIEGNAVKRSYQKA 700
             ++   + ++I +W  GKE NIR+L+STL  +LW     WKPV + D++    VK+ Y+KA
Sbjct:  1166 KDMDPLKLKILEWIEGKERNIRALISTLHTVLWEGENKWKPVSMADLVTPEQVKKYYRKA 1225

Query:   701 LLCLHPDK 708
             +L +HPDK
Sbjct:  1226 VLVVHPDK 1233

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	743
KOG0431	453	consensus Auxilin-like protein and related protein	100.0
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	98.5
KOG0713	336	consensus Molecular chaperone (DnaJ superfamily) [	98.49
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	98.47
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	98.43
PRK14288	369	chaperone protein DnaJ; Provisional	98.33
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	98.31
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	98.28
PRK14296	372	chaperone protein DnaJ; Provisional	98.23
PRK14279	392	chaperone protein DnaJ; Provisional	98.16
PRK14285	365	chaperone protein DnaJ; Provisional	98.15
PRK14299	291	chaperone protein DnaJ; Provisional	98.14
PRK14286	372	chaperone protein DnaJ; Provisional	98.12
PRK14277	386	chaperone protein DnaJ; Provisional	98.1
KOG0712	337	consensus Molecular chaperone (DnaJ superfamily) [	98.1
PRK10767	371	chaperone protein DnaJ; Provisional	98.1
PRK14283	378	chaperone protein DnaJ; Provisional	98.1
PRK14295	389	chaperone protein DnaJ; Provisional	98.09
KOG0691	296	consensus Molecular chaperone (DnaJ superfamily) [	98.09
PRK10266	306	curved DNA-binding protein CbpA; Provisional	98.09
KOG0718	546	consensus Molecular chaperone (DnaJ superfamily) [	98.08
PRK14278	378	chaperone protein DnaJ; Provisional	98.07
PRK14276	380	chaperone protein DnaJ; Provisional	98.06
PRK14294	366	chaperone protein DnaJ; Provisional	98.05
PRK14280	376	chaperone protein DnaJ; Provisional	98.05
PRK14287	371	chaperone protein DnaJ; Provisional	98.05
PRK14297	380	chaperone protein DnaJ; Provisional	98.03
PRK14284	391	chaperone protein DnaJ; Provisional	98.03
PTZ00037	421	DnaJ_C chaperone protein; Provisional	98.02
PRK14291	382	chaperone protein DnaJ; Provisional	98.02
PRK14281	397	chaperone protein DnaJ; Provisional	98.01
PRK14282	369	chaperone protein DnaJ; Provisional	98.01
PRK14301	373	chaperone protein DnaJ; Provisional	97.99
PRK14298	377	chaperone protein DnaJ; Provisional	97.97
PRK14300	372	chaperone protein DnaJ; Provisional	97.97
KOG0716	279	consensus Molecular chaperone (DnaJ superfamily) [	97.96
PRK14292	371	chaperone protein DnaJ; Provisional	97.9
PRK14290	365	chaperone protein DnaJ; Provisional	97.88
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	97.88
PRK14293	374	chaperone protein DnaJ; Provisional	97.87
KOG0719	264	consensus Molecular chaperone (DnaJ superfamily) [	97.84
PHA03102	153	Small T antigen; Reviewed	97.84
PRK14289	386	chaperone protein DnaJ; Provisional	97.79
KOG0717	508	consensus Molecular chaperone (DnaJ superfamily) [	97.78
PTZ00100	116	DnaJ chaperone protein; Provisional	97.63
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	97.62
KOG0720	490	consensus Molecular chaperone (DnaJ superfamily) [	97.6
PRK05014	171	hscB co-chaperone HscB; Provisional	97.54
KOG0721	230	consensus Molecular chaperone (DnaJ superfamily) [	97.46
PRK03578	176	hscB co-chaperone HscB; Provisional	97.43
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	97.38
PRK01356	166	hscB co-chaperone HscB; Provisional	97.37
PRK00294	173	hscB co-chaperone HscB; Provisional	97.33
KOG0715	288	consensus Molecular chaperone (DnaJ superfamily) [	97.25
KOG0550	486	consensus Molecular chaperone (DnaJ superfamily) [	97.24
KOG1150	250	consensus Predicted molecular chaperone (DnaJ supe	97.14
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	97.12
KOG0714	306	consensus Molecular chaperone (DnaJ superfamily) [	97.01
PHA02624	647	large T antigen; Provisional	96.97
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	96.38
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	96.17
KOG1789	2235	consensus Endocytosis protein RME-8, contains DnaJ	95.75
KOG0722	329	consensus Molecular chaperone (DnaJ superfamily) [	95.43
PRK01773	173	hscB co-chaperone HscB; Provisional	95.23
KOG0624	504	consensus dsRNA-activated protein kinase inhibitor	94.97
KOG0723	112	consensus Molecular chaperone (DnaJ superfamily) [	91.37
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	89.71
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	89.55

>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]

Probab=100.00  E-value=1e-36  Score=328.08  Aligned_cols=126  Identities=44%  Similarity=0.746  Sum_probs=107.5

Q ss_pred             ccccccccccchhhh-hhhhhhHHHHhcCCCchhHHHHHHHHHHhhcCCCCcHHHHHhcCccccCCCCCceecccccccC
Q 004595          611 TGDIDKSFQGNSLVN-QVTKDDNKLRKLGNDPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIE  689 (743)
Q Consensus       611 ~~d~~~~~~g~~~~~-~~~q~en~~~~~~~~~~~~d~Id~KI~~Wa~GKE~NIRALLSSL~~VLW~~s~WKpVgmsdLvt  689 (743)
                      +.|++.......-.+ ..++++++|+.  +..+++|.++.+|+.|+.|||+||||||||||+|||++|+|++|+|.|||+
T Consensus       324 ~~~~~~~~~~~~~~d~k~~~~~ae~~~--e~~r~~e~~d~~I~~W~~GKE~NIRALLSTLh~VLW~es~WqpVsltDLVt  401 (453)
T KOG0431|consen  324 FSDLLNPQGFKSTSDEKRPREIAEMRK--ELSRLMEPLDEEIRRWSEGKEGNIRALLSTLHYVLWPESGWQPVSLTDLVT  401 (453)
T ss_pred             hhhhhccccccchhhhhhHHHHHHHHH--HHHhhcchHHHHHHHhcccccccHHHHHHHHhHhhcCccCcccCchhhccC
Confidence            666655532222211 22455555555  335889999999999999999999999999999999999999999999999


Q ss_pred             chhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhcc
Q 004595          690 GNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  738 (743)
Q Consensus       690 p~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~  738 (743)
                      |++|||+||||||||||||++|++++++|||||+.||++|++||+.+..
T Consensus       402 p~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~f~~  450 (453)
T KOG0431|consen  402 PAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNKFNQ  450 (453)
T ss_pred             HHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHhhhc
Confidence            9999999999999999999999999999999999999999999998864

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=98.50  E-value=1e-07  Score=102.70  Aligned_cols=52  Identities=15%  Similarity=0.160  Sum_probs=45.9

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      ++-++|..-+++++|||||||+++++|||+++...       -|+..|++||+||||..
T Consensus         7 YeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~-------~AeeKFKEI~eAYEVLs   58 (371)
T COG0484           7 YEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDK-------EAEEKFKEINEAYEVLS   58 (371)
T ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCH-------HHHHHHHHHHHHHHHhC
Confidence            45678999999999999999999999999998421       48999999999999964

>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.49  E-value=1.2e-07  Score=100.92  Aligned_cols=52  Identities=17%  Similarity=0.195  Sum_probs=46.7

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      ++=+++...++..+||+||||++|++||||++.+.       -|...|..||.||+|..
T Consensus        19 YelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp-------~A~e~F~~in~AYEVLs   70 (336)
T KOG0713|consen   19 YELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDP-------NANEKFKEINAAYEVLS   70 (336)
T ss_pred             HHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCH-------HHHHHHHHHHHHHHHhc
Confidence            56678999999999999999999999999998643       48999999999999963

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=98.47  E-value=2.2e-07  Score=73.32  Aligned_cols=53  Identities=19%  Similarity=0.165  Sum_probs=45.4

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      |+-+||..-++..+||++|+++++.+|||++.+.      ...++..|..|++||++..
T Consensus         4 y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~------~~~~~~~~~~l~~Ay~~L~   56 (60)
T smart00271        4 YEILGVPRDASLDEIKKAYRKLALKYHPDKNPGD------KEEAEEKFKEINEAYEVLS   56 (60)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------hHHHHHHHHHHHHHHHHHc
Confidence            4556777789999999999999999999998742      3478999999999999865

>cd06257 DnaJ DnaJ domain or J-domain

Probab=98.43  E-value=3.2e-07  Score=71.05  Aligned_cols=51  Identities=20%  Similarity=0.167  Sum_probs=43.9

Q ss_pred             eecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          680 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       680 KpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      +-+|+..-++..+||++|+++++.+|||+..+.       ..+...|..|++||+|..
T Consensus         4 ~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~-------~~~~~~~~~l~~Ay~~L~   54 (55)
T cd06257           4 DILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-------PEAEEKFKEINEAYEVLS   54 (55)
T ss_pred             HHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-------HHHHHHHHHHHHHHHHhc
Confidence            446777888999999999999999999998742       468999999999999864

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>PRK14288 chaperone protein DnaJ; Provisional

Probab=98.33  E-value=4.3e-07  Score=96.73  Aligned_cols=52  Identities=19%  Similarity=0.246  Sum_probs=45.0

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      |+-++|..-+++.+||+||||+++++||||++...       .|+..|.+|++||+|..
T Consensus         6 Y~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~-------~a~~~f~~i~~AYevLs   57 (369)
T PRK14288          6 YEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDK-------EAEEKFKLINEAYGVLS   57 (369)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcc-------HHHHHHHHHHHHHHHhc
Confidence            45678999999999999999999999999986421       37889999999999964

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=98.31  E-value=1e-06  Score=70.88  Aligned_cols=53  Identities=19%  Similarity=0.147  Sum_probs=45.7

Q ss_pred             eecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhcc
Q 004595          680 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  738 (743)
Q Consensus       680 KpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~  738 (743)
                      +=+||..-++..+||++|++++..+||||+.+..      -.|+..|..|++||++.+.
T Consensus         4 ~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~------~~~~~~~~~i~~Ay~~L~~   56 (64)
T PF00226_consen    4 EILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDE------AEAEEKFARINEAYEILSD   56 (64)
T ss_dssp             HHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTH------HHHHHHHHHHHHHHHHHHS
T ss_pred             HHCCCCCCCCHHHHHHHHHhhhhccccccchhhh------hhhhHHHHHHHHHHHHhCC
Confidence            3468888999999999999999999999997532      3588999999999999753

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=98.28  E-value=1e-06  Score=90.75  Aligned_cols=59  Identities=22%  Similarity=0.256  Sum_probs=51.7

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      ++-+++..-+++.+||++|||+++.+||||+.+++.+.+..-.|+..|..|++||++..
T Consensus       203 y~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~  261 (267)
T PRK09430        203 YKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIK  261 (267)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHH
Confidence            45668888999999999999999999999998766666666789999999999999864

>PRK14296 chaperone protein DnaJ; Provisional

Probab=98.23  E-value=9.2e-07  Score=94.49  Aligned_cols=51  Identities=12%  Similarity=0.171  Sum_probs=44.1

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      ++-++|..-++..+||+||||+++++||||++. .       -|+..|.+|++||+|..
T Consensus         7 Y~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~-~-------~a~~~F~~i~~AyevLs   57 (372)
T PRK14296          7 YEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS-P-------DAHDKMVEINEAADVLL   57 (372)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-c-------hHHHHHHHHHHHHHHhc
Confidence            456788889999999999999999999999863 1       27889999999999864

>PRK14279 chaperone protein DnaJ; Provisional

Probab=98.16  E-value=1.6e-06  Score=93.23  Aligned_cols=52  Identities=19%  Similarity=0.219  Sum_probs=45.0

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      ++-++|..-++..+||+||||+++++||||++..   .    -|+..|.+|++||+|..
T Consensus        12 y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~---~----~a~~~f~~i~~Ay~vLs   63 (392)
T PRK14279         12 YKELGVSSDASAEEIKKAYRKLARELHPDANPGD---P----AAEERFKAVSEAHDVLS   63 (392)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC---h----HHHHHHHHHHHHHHHhc
Confidence            4677899999999999999999999999998642   1    37889999999999864

>PRK14285 chaperone protein DnaJ; Provisional

Probab=98.15  E-value=1.8e-06  Score=91.97  Aligned_cols=53  Identities=19%  Similarity=0.241  Sum_probs=45.2

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhcc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  738 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~  738 (743)
                      |+-++|...++..+||+||||+++++||||++...       -|+..|.+|++||+|...
T Consensus         6 y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~d   58 (365)
T PRK14285          6 YEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNK-------EAESIFKEATEAYEVLID   58 (365)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCH-------HHHHHHHHHHHHHHHHcC
Confidence            45678889999999999999999999999986421       378899999999999754

>PRK14299 chaperone protein DnaJ; Provisional

Probab=98.14  E-value=2.2e-06  Score=88.63  Aligned_cols=51  Identities=14%  Similarity=0.131  Sum_probs=43.6

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      ++-++|..-+++++||+||||+++++|||+++..        -|+..|.+||+||+|..
T Consensus         7 y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~--------~~~~~f~~i~~Ay~~L~   57 (291)
T PRK14299          7 YAILGVPKNASQDEIKKAFKKLARKYHPDVNKSP--------GAEEKFKEINEAYTVLS   57 (291)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh--------hHHHHHHHHHHHHHHhc
Confidence            4556888899999999999999999999998631        27789999999999864

>PRK14286 chaperone protein DnaJ; Provisional

Probab=98.12  E-value=2.6e-06  Score=91.04  Aligned_cols=52  Identities=17%  Similarity=0.201  Sum_probs=44.4

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      ++-++|..-++..+||+|||++++++||||++...       .|+..|.+|++||+|..
T Consensus         7 y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~   58 (372)
T PRK14286          7 YDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNK-------ESEEKFKEATEAYEILR   58 (372)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCch-------HHHHHHHHHHHHHHHhc
Confidence            45568888899999999999999999999986321       37889999999999964

>PRK14277 chaperone protein DnaJ; Provisional

Probab=98.10  E-value=2.5e-06  Score=91.37  Aligned_cols=52  Identities=15%  Similarity=0.121  Sum_probs=45.1

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      |+-++|..-++..+||+||||+++++||||++...       .|+..|.+|++||+|..
T Consensus         8 y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~   59 (386)
T PRK14277          8 YEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDK-------EAEQKFKEINEAYEILS   59 (386)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCch-------HHHHHHHHHHHHHHHhC
Confidence            56678899999999999999999999999986321       37889999999999964

>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.10  E-value=3.2e-06  Score=90.45  Aligned_cols=48  Identities=19%  Similarity=0.187  Sum_probs=43.0

Q ss_pred             eecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          680 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       680 KpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      .-+++...++.++|||||||+++++||||++.          |...|++|++||||..
T Consensus         8 ~il~v~~~As~~eikkayrkla~k~HpDkn~~----------~~ekfkei~~AyevLs   55 (337)
T KOG0712|consen    8 DILGVSPDASEEEIKKAYRKLALKYHPDKNPD----------AGEKFKEISQAYEVLS   55 (337)
T ss_pred             eeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc----------HHHHHHHHHHHHHHhc
Confidence            44678889999999999999999999999983          7789999999999864

>PRK10767 chaperone protein DnaJ; Provisional

Probab=98.10  E-value=2.7e-06  Score=90.44  Aligned_cols=52  Identities=15%  Similarity=0.215  Sum_probs=44.8

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      |+-++|..-++..+||+||||+++++||||++..       ..|+..|.+|++||+|..
T Consensus         7 y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~-------~~a~~~f~~i~~Ay~~L~   58 (371)
T PRK10767          7 YEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGD-------KEAEEKFKEIKEAYEVLS   58 (371)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-------HHHHHHHHHHHHHHHHhc
Confidence            5667888899999999999999999999998632       138889999999999864

>PRK14283 chaperone protein DnaJ; Provisional

Probab=98.10  E-value=2.6e-06  Score=90.90  Aligned_cols=51  Identities=16%  Similarity=0.172  Sum_probs=44.8

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      ++-++|..-++..+||+||||+++++||||++. .       -|+..|.+|++||+|..
T Consensus         8 y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~-~-------~a~~~f~~i~~Ay~~Ls   58 (378)
T PRK14283          8 YEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE-E-------GAEEKFKEISEAYAVLS   58 (378)
T ss_pred             HHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-c-------cHHHHHHHHHHHHHHhc
Confidence            566789999999999999999999999999863 1       37889999999999864

>PRK14295 chaperone protein DnaJ; Provisional

Probab=98.09  E-value=3.1e-06  Score=90.96  Aligned_cols=52  Identities=17%  Similarity=0.154  Sum_probs=45.2

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      ++-++|..-++..+||+||||+++++||||++...       .|+..|.+|++||+|..
T Consensus        12 y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~   63 (389)
T PRK14295         12 YKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDA-------KAEERFKEISEAYDVLS   63 (389)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCch-------hHHHHHHHHHHHHHHHC
Confidence            56778899999999999999999999999986421       38899999999999864

>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.09  E-value=3.3e-06  Score=88.99  Aligned_cols=49  Identities=20%  Similarity=0.226  Sum_probs=44.1

Q ss_pred             cccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          682 VPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       682 VgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      +||...+++++||||||+.+|.+||||++.+.   +    |..-|+.|.+||+|.+
T Consensus        11 Lgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP---~----A~ekFq~L~eAy~VL~   59 (296)
T KOG0691|consen   11 LGISEDATDAEIKKAYRKKALQYHPDKNPGDP---Q----AAEKFQELSEAYEVLS   59 (296)
T ss_pred             hCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh---H----HHHHHHHHHHHHHHhc
Confidence            57889999999999999999999999998642   2    8999999999999975

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=98.09  E-value=2.8e-06  Score=88.30  Aligned_cols=51  Identities=14%  Similarity=0.102  Sum_probs=44.4

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      |+-+++...++.++||+||||+++++|||++...        .|+..|.+|++||+|..
T Consensus         7 y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~--------~~~~~f~~i~~Ay~~L~   57 (306)
T PRK10266          7 YAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEP--------DAEARFKEVAEAWEVLS   57 (306)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------cHHHHHHHHHHHHHHhh
Confidence            5667888999999999999999999999997521        48899999999999864

>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=98.08  E-value=2.6e-06  Score=94.23  Aligned_cols=54  Identities=20%  Similarity=0.212  Sum_probs=48.4

Q ss_pred             eecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          680 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       680 KpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      .-+++..-++..+||+||||.|+.+||||+.    +++||-.|+.+|..|.+||||..
T Consensus        13 a~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~----dpd~K~~AE~~F~~i~~AyEVLs   66 (546)
T KOG0718|consen   13 ALLNLPKDATDEEIKKAYRRLSRLFHPDKHT----DPDQKKAAEEKFQRIQRAYEVLS   66 (546)
T ss_pred             HHhCCCcccCHHHHHHHHHHHHHhcCCcccC----ChhHHHHHHHHHHHHHHHHHHhc
Confidence            4457788899999999999999999999997    46899999999999999999853

>PRK14278 chaperone protein DnaJ; Provisional

Probab=98.07  E-value=3.3e-06  Score=90.40  Aligned_cols=51  Identities=18%  Similarity=0.124  Sum_probs=44.5

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      |+-++|..-++.++||+||||+++++|||+++.    .    -|+..|.+|++||+|..
T Consensus         6 y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~----~----~a~~~f~~i~~Ay~vL~   56 (378)
T PRK14278          6 YGLLGVSRNASDAEIKRAYRKLARELHPDVNPD----E----EAQEKFKEISVAYEVLS   56 (378)
T ss_pred             ceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCc----H----HHHHHHHHHHHHHHHhc
Confidence            466788899999999999999999999999862    1    37889999999999964

>PRK14276 chaperone protein DnaJ; Provisional

Probab=98.06  E-value=3.9e-06  Score=89.76  Aligned_cols=51  Identities=16%  Similarity=0.135  Sum_probs=43.9

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      ++-++|..-++..+||+||||+++++|||+++..        -|+..|.+|++||+|..
T Consensus         7 y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~--------~a~~~f~~i~~Ay~vL~   57 (380)
T PRK14276          7 YDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEP--------GAEEKYKEVQEAYETLS   57 (380)
T ss_pred             HHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------CHHHHHHHHHHHHHHhc
Confidence            4567888899999999999999999999998631        26788999999999864

>PRK14294 chaperone protein DnaJ; Provisional

Probab=98.05  E-value=3.6e-06  Score=89.53  Aligned_cols=52  Identities=17%  Similarity=0.227  Sum_probs=44.3

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      |+-++|..-++.++||+||||+++++||||++...       .|+..|.+|++||+|..
T Consensus         7 y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~-------~~~~~f~~~~~Ay~vL~   58 (366)
T PRK14294          7 YEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDK-------EAEELFKEAAEAYEVLS   58 (366)
T ss_pred             HHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCch-------HHHHHHHHHHHHHHHhc
Confidence            45678888899999999999999999999986421       37889999999999864

>PRK14280 chaperone protein DnaJ; Provisional

Probab=98.05  E-value=4.2e-06  Score=89.42  Aligned_cols=51  Identities=14%  Similarity=0.171  Sum_probs=44.1

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      ++-++|..-++..+||+||||+++++||||++..        -|+..|.+|++||+|..
T Consensus         7 y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~--------~a~~~f~~i~~Ay~vL~   57 (376)
T PRK14280          7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEE--------GADEKFKEISEAYEVLS   57 (376)
T ss_pred             HHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--------cHHHHHHHHHHHHHHhc
Confidence            4567888899999999999999999999998631        27789999999999864

>PRK14287 chaperone protein DnaJ; Provisional

Probab=98.05  E-value=4.1e-06  Score=89.51  Aligned_cols=51  Identities=18%  Similarity=0.118  Sum_probs=43.7

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      ++-++|..-++..+||+||||+++++|||+++..        -|+..|.+||+||+|..
T Consensus         7 y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~--------~~~~~f~~i~~Ay~~L~   57 (371)
T PRK14287          7 YEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAP--------DAEDKFKEVKEAYDTLS   57 (371)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh--------hHHHHHHHHHHHHHHhC
Confidence            4557888999999999999999999999998521        27789999999999864

>PRK14297 chaperone protein DnaJ; Provisional

Probab=98.03  E-value=4.7e-06  Score=89.08  Aligned_cols=52  Identities=17%  Similarity=0.221  Sum_probs=44.4

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      ++-++|..-++..+||+||||+++++||||++...       .|+..|.+|++||+|..
T Consensus         7 y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~   58 (380)
T PRK14297          7 YEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNK-------EAEEKFKEINEAYQVLS   58 (380)
T ss_pred             HHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcH-------HHHHHHHHHHHHHHHhc
Confidence            45568888899999999999999999999986421       37889999999999865

>PRK14284 chaperone protein DnaJ; Provisional

Probab=98.03  E-value=4.2e-06  Score=89.87  Aligned_cols=52  Identities=19%  Similarity=0.222  Sum_probs=44.4

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      |+-++|..-+++.+||+||||+++++|||+++...       .|+..|.+|++||+|..
T Consensus         4 y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~   55 (391)
T PRK14284          4 YTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDA-------EAEKRFKEVSEAYEVLS   55 (391)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCch-------HHHHHHHHHHHHHHHhc
Confidence            44578888999999999999999999999987421       37889999999999864

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=98.02  E-value=4.7e-06  Score=90.93  Aligned_cols=48  Identities=19%  Similarity=0.219  Sum_probs=41.7

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      ++-++|..-+++++||+||||+++++||||++.           +..|.+|++||+|..
T Consensus        31 Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~-----------~e~F~~i~~AYevLs   78 (421)
T PTZ00037         31 YEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----------PEKFKEISRAYEVLS   78 (421)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch-----------HHHHHHHHHHHHHhc
Confidence            456788889999999999999999999999741           268999999999864

>PRK14291 chaperone protein DnaJ; Provisional

Probab=98.02  E-value=4.6e-06  Score=89.27  Aligned_cols=52  Identities=13%  Similarity=0.148  Sum_probs=44.3

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhcc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  738 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~  738 (743)
                      ++-++|..-++..+||+||||+++++||||++..        -|+..|..|++||+|...
T Consensus         6 Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~--------~~~~~f~~i~~Ay~vLsd   57 (382)
T PRK14291          6 YEILGVSRNATQEEIKKAYRRLARKYHPDFNKNP--------EAEEKFKEINEAYQVLSD   57 (382)
T ss_pred             HHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc--------cHHHHHHHHHHHHHHhcC
Confidence            4557888899999999999999999999998631        267889999999998653

>PRK14281 chaperone protein DnaJ; Provisional

Probab=98.01  E-value=5e-06  Score=89.52  Aligned_cols=52  Identities=19%  Similarity=0.257  Sum_probs=44.0

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      ++=++|..-++..+||+||||+++++||||++...       .|+..|.+||+||+|..
T Consensus         6 y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~   57 (397)
T PRK14281          6 YEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNK-------EAEEHFKEVNEAYEVLS   57 (397)
T ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCch-------HHHHHHHHHHHHHHHhh
Confidence            35567888899999999999999999999986421       37789999999999964

>PRK14282 chaperone protein DnaJ; Provisional

Probab=98.01  E-value=5.1e-06  Score=88.50  Aligned_cols=53  Identities=15%  Similarity=0.206  Sum_probs=44.8

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      ++-++|..-++..+||+||||+++++|||+++..      .-.|+..|.+|++||+|..
T Consensus         7 y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~~a~~~f~~i~~Ay~vL~   59 (369)
T PRK14282          7 YEILGVSRNATQEEIKRAYKRLVKEWHPDRHPEN------RKEAEQKFKEIQEAYEVLS   59 (369)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccc------hhHHHHHHHHHHHHHHHhc
Confidence            4567888899999999999999999999998631      1138899999999999964

>PRK14301 chaperone protein DnaJ; Provisional

Probab=97.99  E-value=5.7e-06  Score=88.47  Aligned_cols=52  Identities=17%  Similarity=0.217  Sum_probs=44.0

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      ++-++|..-++..+||+||||+++++||||++...       -|+..|..|++||+|..
T Consensus         7 y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~-------~a~~~f~~i~~Ay~vL~   58 (373)
T PRK14301          7 YEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNP-------EAEQKFKEAAEAYEVLR   58 (373)
T ss_pred             HHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCCh-------HHHHHHHHHHHHHHHhc
Confidence            45567888899999999999999999999986421       37788999999999875

>PRK14298 chaperone protein DnaJ; Provisional

Probab=97.97  E-value=5.7e-06  Score=88.69  Aligned_cols=51  Identities=20%  Similarity=0.223  Sum_probs=43.7

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      |+=++|..-++..+||+||||+++++|||+++..        -|+..|.+||+||+|..
T Consensus         8 y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~--------~~~~~f~~i~~Ay~vL~   58 (377)
T PRK14298          8 YEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEP--------DAEEKFKEISEAYAVLS   58 (377)
T ss_pred             HHhhCCCCCCCHHHHHHHHHHHHHHhCccccCCh--------hHHHHHHHHHHHHHHhc
Confidence            4567888899999999999999999999998521        27789999999999864

>PRK14300 chaperone protein DnaJ; Provisional

Probab=97.97  E-value=6.3e-06  Score=87.98  Aligned_cols=51  Identities=18%  Similarity=0.135  Sum_probs=44.3

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      |+-++|..-++..+||+||||+++++|||+++. .       .|+..|.+|++||+|..
T Consensus         6 y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~-~-------~~~~~f~~i~~Ay~~L~   56 (372)
T PRK14300          6 YQILGVSKTASQADLKKAYLKLAKQYHPDTTDA-K-------DAEKKFKEINAAYDVLK   56 (372)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-c-------CHHHHHHHHHHHHHHhh
Confidence            567888899999999999999999999999862 1       26778999999999864

>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.96  E-value=7.9e-06  Score=85.40  Aligned_cols=51  Identities=22%  Similarity=0.204  Sum_probs=43.1

Q ss_pred             ecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhcc
Q 004595          681 PVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  738 (743)
Q Consensus       681 pVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~  738 (743)
                      -+|+...++..+|||+||++++++||||++...       -|...|++||+||+|.+-
T Consensus        36 VLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P-------~~~dkf~eIN~Ay~ILsD   86 (279)
T KOG0716|consen   36 VLGLPKTATKDEIKKAYRKLALKYHPDKNGDNP-------EATDKFKEINTAYAILSD   86 (279)
T ss_pred             HhCCCcccchHHHHHHHHHHHHHhCCCcCCCCc-------hhHHHHHHHHHHHHHhcC
Confidence            346777899999999999999999999997532       266889999999999764

>PRK14292 chaperone protein DnaJ; Provisional

Probab=97.90  E-value=1.1e-05  Score=85.87  Aligned_cols=51  Identities=18%  Similarity=0.264  Sum_probs=43.5

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      ++=++|..-++..+||+||||+++++|||++...        .|+..|..||+||+|..
T Consensus         5 y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~--------~a~~~~~~i~~Ay~vL~   55 (371)
T PRK14292          5 YELLGVSRTASADEIKSAYRKLALKYHPDRNKEK--------GAAEKFAQINEAYAVLS   55 (371)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCh--------hHHHHHHHHHHHHHHhc
Confidence            3456788889999999999999999999998631        37789999999999965

>PRK14290 chaperone protein DnaJ; Provisional

Probab=97.88  E-value=1.2e-05  Score=85.63  Aligned_cols=53  Identities=13%  Similarity=0.092  Sum_probs=45.0

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      ++-++|..-++.++||+||||+++++|||+++..      ...|+..|..|++||+|..
T Consensus         6 y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~------~~~a~~~f~~i~~Ay~~L~   58 (365)
T PRK14290          6 YKILGVDRNASQEDIKKAFRELAKKWHPDLHPGN------KAEAEEKFKEISEAYEVLS   58 (365)
T ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc------hhHHHHHHHHHHHHHHHhc
Confidence            4567888899999999999999999999998631      1248899999999999864

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=97.88  E-value=1.7e-05  Score=72.74  Aligned_cols=52  Identities=19%  Similarity=0.188  Sum_probs=43.9

Q ss_pred             ecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhcc
Q 004595          681 PVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  738 (743)
Q Consensus       681 pVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~  738 (743)
                      =++|..-++..+||++|||+++++|||+++...   .   .|+..|..+++||+|..-
T Consensus        11 iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~---~---~a~~~f~~i~~Ay~vLsd   62 (237)
T COG2214          11 ILGVPPNASLEEIKKAYRKLALKYHPDRNPGDP---K---VAEEKFKEINEAYEILSD   62 (237)
T ss_pred             HhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCch---h---HHHHHHHHHHHHHHHhhC
Confidence            356667888999999999999999999998532   1   689999999999998753

>PRK14293 chaperone protein DnaJ; Provisional

Probab=97.87  E-value=1.4e-05  Score=85.42  Aligned_cols=51  Identities=18%  Similarity=0.191  Sum_probs=43.9

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      |+=+++...+++.+||+|||++++++|||+++..        .|+..|..|++||+|..
T Consensus         6 y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~--------~a~~~f~~i~~Ay~vL~   56 (374)
T PRK14293          6 YEILGVSRDADKDELKRAYRRLARKYHPDVNKEP--------GAEDRFKEINRAYEVLS   56 (374)
T ss_pred             hhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc--------CHHHHHHHHHHHHHHHh
Confidence            5567888899999999999999999999998631        26789999999999864

>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.84  E-value=1.7e-05  Score=81.89  Aligned_cols=54  Identities=19%  Similarity=0.244  Sum_probs=48.1

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      +.=+||..-+++..|++||+|+.|.+||||++     .|++.-|...|+.|+.||.|++
T Consensus        17 YevLGVer~a~~~eIrkAY~klal~~HPDk~~-----eed~~ea~~kFq~l~k~y~iLs   70 (264)
T KOG0719|consen   17 YEVLGVERDATDKEIRKAYHKLALRLHPDKNH-----EEDKVEATEKFQQLQKAYQILS   70 (264)
T ss_pred             HHHhhhcccCCHHHHHHHHHHHHHHhCCCcch-----hhhHHHHHHHHHHHHHHHHHhh
Confidence            44568888999999999999999999999986     3677789999999999999985

>PHA03102 Small T antigen; Reviewed

Probab=97.84  E-value=1.7e-05  Score=76.92  Aligned_cols=45  Identities=18%  Similarity=0.098  Sum_probs=36.3

Q ss_pred             cccccc--CchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhcc
Q 004595          683 PLVDII--EGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  738 (743)
Q Consensus       683 gmsdLv--tp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~  738 (743)
                      ||..-+  +..+||+|||++++.+||||.+.           +..|.+||+||+|...
T Consensus        12 Gl~~~A~~s~~eIKkAYr~la~~~HPDkgg~-----------~e~~k~in~Ay~~L~d   58 (153)
T PHA03102         12 GLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD-----------EEKMKELNTLYKKFRE   58 (153)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHCcCCCch-----------hHHHHHHHHHHHHHhh
Confidence            445556  88999999999999999999531           3588999999998653

>PRK14289 chaperone protein DnaJ; Provisional

Probab=97.79  E-value=2e-05  Score=84.42  Aligned_cols=52  Identities=17%  Similarity=0.215  Sum_probs=44.4

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      |+-++|..-++..+||+||||+++++||||++...       .|+..|..|++||+|..
T Consensus         8 y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~-------~a~~~f~~i~~Ay~~L~   59 (386)
T PRK14289          8 YEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDK-------EAEEKFKEAAEAYDVLS   59 (386)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCh-------HHHHHHHHHHHHHHHhc
Confidence            45668888999999999999999999999986421       37889999999999864

>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.78  E-value=2.3e-05  Score=86.78  Aligned_cols=53  Identities=17%  Similarity=0.280  Sum_probs=44.8

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      +.-++|..-+++.+||++|||++|.+||||++..   ++   -|..+|..|+.||+|..
T Consensus        11 YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~---ie---eat~~F~~i~aAYeVLS   63 (508)
T KOG0717|consen   11 YEVLGVERDADDDEIKKNYRKLALQYHPDKNPDR---IE---EATQQFQLIQAAYEVLS   63 (508)
T ss_pred             HHHhcccccCCHHHHHHHHHHHHHhhCCCCCCcc---HH---HHHHHHHHHHHHHHHhc
Confidence            3456788889999999999999999999998632   22   48999999999999964

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=97.63  E-value=4.3e-05  Score=71.44  Aligned_cols=47  Identities=11%  Similarity=0.133  Sum_probs=40.1

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhh
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIS  736 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~  736 (743)
                      ++-+++..-++.++||++||++++.+||||..    +       ..+|.+||+||++.
T Consensus        68 y~ILGv~~~As~~eIkkaYRrLa~~~HPDkgG----s-------~~~~~kIneAyevL  114 (116)
T PTZ00100         68 YKILNISPTASKERIREAHKQLMLRNHPDNGG----S-------TYIASKVNEAKDLL  114 (116)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCC----C-------HHHHHHHHHHHHHH
Confidence            57788888999999999999999999999842    1       24678999999985

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=97.62  E-value=5.1e-05  Score=90.03  Aligned_cols=51  Identities=10%  Similarity=-0.075  Sum_probs=44.9

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      +.-+|+..-++..+||+||||+++++||||++..        .|...|..|++||+|..
T Consensus       576 YdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~--------~A~ekFq~I~EAYeVLS  626 (1136)
T PTZ00341        576 YDILGVGVNADMKEISERYFKLAENYYPPKRSGN--------EGFHKFKKINEAYQILG  626 (1136)
T ss_pred             HHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--------hHHHHHHHHHHHHHHhC
Confidence            4678999999999999999999999999998631        27789999999999965

>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.60  E-value=4.1e-05  Score=84.74  Aligned_cols=51  Identities=20%  Similarity=0.202  Sum_probs=45.4

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      +--+|+..-++.++|||.|||.+..|||||+.+.        .|+.+|..|+.||+|.-
T Consensus       238 YsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~--------~A~Eafk~Lq~Afevig  288 (490)
T KOG0720|consen  238 YSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIP--------RAEEAFKKLQVAFEVIG  288 (490)
T ss_pred             hhhcCCCCCCCHHHHHHHHHhhceEeCCCccCCh--------hHHHHHHHHHHHHHHhc
Confidence            5677888899999999999999999999999753        58999999999999853

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=97.54  E-value=0.00013  Score=71.05  Aligned_cols=49  Identities=16%  Similarity=0.156  Sum_probs=41.2

Q ss_pred             ccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          687 IIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       687 Lvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      -++..+||++||+++..+||||....  +...+.+|...|..||+||+|..
T Consensus        14 ~~d~~~L~~~yr~l~~~~HPDk~~~~--~~~~~~~a~~~s~~iN~AY~~L~   62 (171)
T PRK05014         14 DIDTQLLASRYQELQRQFHPDKFANA--SERERLLAVQQAATINDAYQTLK   62 (171)
T ss_pred             CCCHHHHHHHHHHHHHHhCcCCCCCC--cHHHHHHHHHHHHHHHHHHHHHC
Confidence            47789999999999999999998753  23445578889999999999865

>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.46  E-value=0.00013  Score=74.71  Aligned_cols=52  Identities=17%  Similarity=0.159  Sum_probs=42.7

Q ss_pred             eecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhcc
Q 004595          680 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  738 (743)
Q Consensus       680 KpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~  738 (743)
                      .=+|+..-++.++||||||++.+++||||++...       --+.-|+.|++||+..|-
T Consensus       103 EILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~-------~~e~~~~~I~KAY~aLTD  154 (230)
T KOG0721|consen  103 EILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEE-------GDEEFFEAIAKAYQALTD  154 (230)
T ss_pred             HhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcc-------hhHHHHHHHHHHHHHhcc
Confidence            4578999999999999999999999999987422       135678888888887764

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=97.43  E-value=0.00024  Score=69.84  Aligned_cols=50  Identities=14%  Similarity=0.202  Sum_probs=41.9

Q ss_pred             ccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhcc
Q 004595          687 IIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  738 (743)
Q Consensus       687 Lvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~  738 (743)
                      -+++.+|+++||++...+||||..+..  ...+.+|...+..||+||+|..+
T Consensus        19 ~~d~~~L~~~yr~lq~~~HPD~~~~~~--~~e~~~a~~~s~~iN~AY~tL~~   68 (176)
T PRK03578         19 ALDEAALDAAYRTVQAQVHPDRFAAAG--DAEKRVAMQWATRANEAYQTLRD   68 (176)
T ss_pred             CCCHHHHHHHHHHHHHHHCcCCCCCCC--HHHHHHHHHHHHHHHHHHHHhCC
Confidence            478899999999999999999997533  34455788889999999999865

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=97.38  E-value=0.00024  Score=68.42  Aligned_cols=49  Identities=18%  Similarity=0.171  Sum_probs=40.6

Q ss_pred             cCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhcc
Q 004595          688 IEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  738 (743)
Q Consensus       688 vtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~  738 (743)
                      ++..+|+++||++...+||||..+.+  ...+.+|...|..||+||+|...
T Consensus         3 iD~~~L~~~yr~lq~~~HPD~~~~~~--~~~~~~a~~~s~~iN~AY~~L~~   51 (157)
T TIGR00714         3 LDTQALSLRYQDLQRQYHPDKFASGS--AQEQLAAVQQSTTLNQAYQTLKD   51 (157)
T ss_pred             CCHHHHHHHHHHHHHHHCcCCCCCCC--hhhhHHHHHHHHHHHHHHHHhCC
Confidence            57789999999999999999986533  23345788899999999999764

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=97.37  E-value=0.00026  Score=68.91  Aligned_cols=52  Identities=15%  Similarity=0.064  Sum_probs=41.4

Q ss_pred             cccc--ccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhcc
Q 004595          683 PLVD--IIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  738 (743)
Q Consensus       683 gmsd--Lvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~  738 (743)
                      ||..  -++..+|+++||++.+.+||||...    ...+..|...|..||+||+|...
T Consensus         9 gl~~~f~id~~~L~~aYr~lq~~~HPDk~~~----~~~k~~~~~~s~~in~AY~~L~d   62 (166)
T PRK01356          9 GLPQEYNIDLKILEKQYFAMQVKYHPDKAKT----LQEKEQNLIIASELNNAYSTLKD   62 (166)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHHHHHHHhCC
Confidence            4444  3778999999999999999999753    34455677789999999998753

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=97.33  E-value=0.00035  Score=68.66  Aligned_cols=51  Identities=10%  Similarity=0.054  Sum_probs=42.0

Q ss_pred             cccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhcc
Q 004595          686 DIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  738 (743)
Q Consensus       686 dLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~  738 (743)
                      --++..+|+++||++...+||||..+..  ...+.+|...|..||+||+|...
T Consensus        16 f~id~~~L~~~Yr~Lq~~~HPDk~~~~~--~~e~~~a~~~s~~IN~AY~~L~~   66 (173)
T PRK00294         16 FRLDLDQLATRYRELAREVHPDRFADAP--EREQRLALERSASLNEAYQTLKS   66 (173)
T ss_pred             CCCCHHHHHHHHHHHHHHHCcCCCCCCc--HHHHHHHHHHHHHHHHHHHHhCC
Confidence            3578899999999999999999987532  33345788889999999999764

>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.25  E-value=0.00032  Score=73.50  Aligned_cols=59  Identities=19%  Similarity=0.115  Sum_probs=50.0

Q ss_pred             ccCCCCCceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhcc
Q 004595          672 ILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  738 (743)
Q Consensus       672 VLW~~s~WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~  738 (743)
                      +.|...-.+-+|+..-++..+||+||++++.++|||-+...        .|+..|++|.+||||..-
T Consensus        39 ~~~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~--------~a~~kF~eI~~AYEiLsd   97 (288)
T KOG0715|consen   39 IISKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDK--------EASKKFKEISEAYEILSD   97 (288)
T ss_pred             cCCCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCc--------chhhHHHHHHHHHHHhcC
Confidence            45544345678999999999999999999999999998753        589999999999999653

>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.24  E-value=0.00033  Score=77.38  Aligned_cols=94  Identities=20%  Similarity=0.220  Sum_probs=69.4

Q ss_pred             CCCchhHHHHHHHHHHhhc----CCCCcHHHHHhcCccccCC--CCC-ceecccccccCchhHHHHHHHHHhhhCCCccC
Q 004595          638 GNDPQEFQAIDVQIRKWSN----GKEGNIRSLLSTLQYILWP--ASG-WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQ  710 (743)
Q Consensus       638 ~~~~~~~d~Id~KI~~Wa~----GKE~NIRALLSSL~~VLW~--~s~-WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~  710 (743)
                      ++-+..++..+.-|+....    -+.-+||.+|--.+.-|=-  .-. ++-+|+..+++...|||||||++|.+||||+.
T Consensus       328 a~c~l~le~~e~AV~d~~~a~q~~~s~e~r~~l~~A~~aLkkSkRkd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~a  407 (486)
T KOG0550|consen  328 ANCHLALEKWEEAVEDYEKAMQLEKDCEIRRTLREAQLALKKSKRKDWYKILGISRNASDDEIKKAYRKLALVHHPDKNA  407 (486)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhhhhhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCc
Confidence            3334555555555555442    3335688888877766641  112 37789999999999999999999999999987


Q ss_pred             CCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          711 QKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       711 q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      ..      ++-|+..|+++-+||.|..
T Consensus       408 gs------q~eaE~kFkevgeAy~il~  428 (486)
T KOG0550|consen  408 GS------QKEAEAKFKEVGEAYTILS  428 (486)
T ss_pred             ch------hHHHHHHHHHHHHHHHHhc
Confidence            41      5679999999999999853

>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.14  E-value=0.00039  Score=71.05  Aligned_cols=51  Identities=18%  Similarity=0.275  Sum_probs=42.4

Q ss_pred             ecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          681 PVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       681 pVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      -+.|..-++..+||+-||++.+.|||||++.+.      .-|++.|++|..||.+..
T Consensus        58 VLqIdpev~~edikkryRklSilVHPDKN~Dd~------~rAqkAFdivkKA~k~l~  108 (250)
T KOG1150|consen   58 VLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDA------ERAQKAFDIVKKAYKLLE  108 (250)
T ss_pred             HHhcCCCCCHHHHHHHHHhhheeecCCCCcccH------HHHHHHHHHHHHHHHHHh
Confidence            345666788899999999999999999998531      259999999999998754

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=97.12  E-value=0.00047  Score=80.63  Aligned_cols=50  Identities=12%  Similarity=0.164  Sum_probs=42.6

Q ss_pred             eecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          680 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       680 KpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      +=+||...++..+||++||++++++||||+.. .       .|+..|..|++||+|..
T Consensus         6 eVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~-~-------eAeekFqeINEAYEVLS   55 (871)
T TIGR03835         6 EVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA-P-------DAASIFAEINEANDVLS   55 (871)
T ss_pred             HhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-h-------hHHHHHHHHHHHHHHhC
Confidence            34677788999999999999999999999863 1       36788999999999875

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=97.01  E-value=0.00059  Score=66.14  Aligned_cols=49  Identities=20%  Similarity=0.222  Sum_probs=38.2

Q ss_pred             cccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhh
Q 004595          682 VPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIS  736 (743)
Q Consensus       682 VgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~  736 (743)
                      +++..-+...+||+||++++++.||||+..     . +..|+..|..+++||+|.
T Consensus         9 l~i~~~as~~~i~ka~~~~a~~~hpdk~~~-----~-~~~~~~~~~~~~ea~~~l   57 (306)
T KOG0714|consen    9 LGIARSASEEDIKKAYRKLALKYHPDKNPS-----P-KEVAEAKFKEIAEAYEVL   57 (306)
T ss_pred             hCccccccHHHHHHHHHHHHHhhCCCCCCC-----c-hhhHHHHHhhhhcccccc
Confidence            344444556699999999999999999653     3 456777999999999854

>PHA02624 large T antigen; Provisional

Probab=96.97  E-value=0.0007  Score=77.85  Aligned_cols=46  Identities=15%  Similarity=0.041  Sum_probs=37.3

Q ss_pred             ccccccc--CchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhcc
Q 004595          682 VPLVDII--EGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  738 (743)
Q Consensus       682 VgmsdLv--tp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~  738 (743)
                      +|+..-+  +..+||+||||+++++||||..           ++..|++||+||++...
T Consensus        17 LGL~~~A~gs~~eIKkAYRkLAkkyHPDKgG-----------deekfk~Ln~AYevL~d   64 (647)
T PHA02624         17 LGLPMAAWGNLPLMRKAYLRKCKEYHPDKGG-----------DEEKMKRLNSLYKKLQE   64 (647)
T ss_pred             cCCCCCCCCCHHHHHHHHHHHHHHHCcCCCC-----------cHHHHHHHHHHHHHHhc
Confidence            4555555  8899999999999999999952           23679999999998754

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=96.38  E-value=0.0029  Score=70.75  Aligned_cols=83  Identities=17%  Similarity=0.129  Sum_probs=59.7

Q ss_pred             HHHhhc-C-CCCcHHHHHhcCccccCCCCCceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHH
Q 004595          651 IRKWSN-G-KEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIF  728 (743)
Q Consensus       651 I~~Wa~-G-KE~NIRALLSSL~~VLW~~s~WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~  728 (743)
                      |-.|.- | ---|||. |.-+-.=+|+  -+.=+|++.-....+||++||++..+.||||++.  ...+-+-.-+..+.+
T Consensus        74 ivgWl~i~~L~~~I~~-~k~~~~~~fD--PyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~--mvn~~rse~Ee~y~~  148 (610)
T COG5407          74 IVGWLVISYLISNIRT-LKIEYRRGFD--PYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPP--MVNELRSEYEEKYKT  148 (610)
T ss_pred             HHHHHHHHHHHHHHHH-HHHHHHcCCC--hHHhhcccCCCcHHHHHHHHHhheeecChhhcCC--CChhHHHHHHHHHHH
Confidence            566763 1 0123444 3333334553  2455789999999999999999999999999985  345666678899999


Q ss_pred             HHHhhhhhcc
Q 004595          729 CRRHGLISTH  738 (743)
Q Consensus       729 LNEAYEV~~~  738 (743)
                      +++||+..|.
T Consensus       149 ItkAY~~lTd  158 (610)
T COG5407         149 ITKAYGLLTD  158 (610)
T ss_pred             HHHHHHhhhh
Confidence            9999987764

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=96.17  E-value=0.0057  Score=64.98  Aligned_cols=31  Identities=19%  Similarity=0.330  Sum_probs=27.7

Q ss_pred             eecccccccCchhHHHHHHHHHhhhCCCccC
Q 004595          680 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQ  710 (743)
Q Consensus       680 KpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~  710 (743)
                      +-++|..-++..+||+||||+++++||||++
T Consensus         4 ~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~   34 (354)
T TIGR02349         4 EILGVSKDASEEEIKKAYRKLAKKYHPDRNK   34 (354)
T ss_pred             HhCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
Confidence            4467788889999999999999999999986

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]

Probab=95.75  E-value=0.0089  Score=72.14  Aligned_cols=39  Identities=18%  Similarity=0.257  Sum_probs=34.2

Q ss_pred             CchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          689 EGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       689 tp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      .+.+||++|+|++.++||||++.          ....|..+|+|||...
T Consensus      1298 ~~~KirrqY~kLA~kYHPDKNPE----------GRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1298 KPAKIRRQYYKLAAKYHPDKNPE----------GREMFERVNKAYELLS 1336 (2235)
T ss_pred             cHHHHHHHHHHHHHHhCCCCCch----------HHHHHHHHHHHHHHHH
Confidence            34899999999999999999983          4689999999999764

>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=95.43  E-value=0.01  Score=62.89  Aligned_cols=50  Identities=12%  Similarity=0.224  Sum_probs=42.4

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhh
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIS  736 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~  736 (743)
                      ..-+|++.-+...+|+||||++++.+|||+++..    |    ++..|..|..||++.
T Consensus        36 YdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~----e----~k~~F~~iAtayeil   85 (329)
T KOG0722|consen   36 YDVLGVAREANKSEIAKAYRQLARRHHPDRNRDP----E----SKKLFVKIATAYEIL   85 (329)
T ss_pred             HHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCc----h----hhhhhhhhhcccccc
Confidence            4556888888889999999999999999999853    3    348899999999975

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=95.23  E-value=0.03  Score=55.32  Aligned_cols=50  Identities=16%  Similarity=0.179  Sum_probs=42.3

Q ss_pred             ccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhcc
Q 004595          687 IIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  738 (743)
Q Consensus       687 Lvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~  738 (743)
                      -+++.++++.|+.+...+||||..+.+  ...+.+|...=..||+||.|...
T Consensus        15 ~iD~~~L~~~y~~Lq~~~HPD~f~~~~--~~eq~~a~~~ss~iN~AY~tLkd   64 (173)
T PRK01773         15 QLDNALLSERYLALQKSLHPDNFANSS--AQEQRLAMQKSAEVNDALQILKD   64 (173)
T ss_pred             CCCHHHHHHHHHHHHHHhCcCcccCCC--HHHHHHHHHHHHHHHHHHHHHCC
Confidence            588899999999999999999997643  45556788888999999998754

>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]

Probab=94.97  E-value=0.024  Score=62.48  Aligned_cols=56  Identities=20%  Similarity=0.233  Sum_probs=49.9

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhcc
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  738 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~  738 (743)
                      +|=+|+-.-+.-.+|-|||||++.++|||--+.    .|.|-.|+..|+-|..|.||.+.
T Consensus       397 YKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqd----EeEKKkAEKKFIDIAAAKEVLsd  452 (504)
T KOG0624|consen  397 YKILGVKRNASKQEITKAYRKLAQKWHPDNFQD----EEEKKKAEKKFIDIAAAKEVLSD  452 (504)
T ss_pred             HHHhhhcccccHHHHHHHHHHHHHhcCCccccC----HHHHHHHHHhhhhHHHHHHhhcC
Confidence            677889999999999999999999999999873    56678999999999999999763

>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]

Probab=91.37  E-value=0.29  Score=46.34  Aligned_cols=45  Identities=18%  Similarity=0.339  Sum_probs=36.8

Q ss_pred             cccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhc
Q 004595          682 VPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       682 VgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      +++..-++.++||.|.||+.+.-|||+-.+       .|||.+    +|||+++..
T Consensus        62 L~v~~s~~k~KikeaHrriM~~NHPD~GGS-------PYlAsK----INEAKdlLe  106 (112)
T KOG0723|consen   62 LGVTPSLDKDKIKEAHRRIMLANHPDRGGS-------PYLASK----INEAKDLLE  106 (112)
T ss_pred             hCCCccccHHHHHHHHHHHHHcCCCcCCCC-------HHHHHH----HHHHHHHHh
Confidence            456688899999999999999999999753       377764    689988753

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=89.71  E-value=0.3  Score=47.74  Aligned_cols=57  Identities=23%  Similarity=0.160  Sum_probs=46.8

Q ss_pred             ceecccccccCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhh
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLI  735 (743)
Q Consensus       679 WKpVgmsdLvtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV  735 (743)
                      .+-.++..-.+...||++|++++-..|||++...+..++--.+++..+..|++||+-
T Consensus       116 l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~  172 (174)
T COG1076         116 LKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYED  172 (174)
T ss_pred             HHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHh
Confidence            344555556677899999999999999999998776666666899999999999974

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=89.55  E-value=0.4  Score=51.66  Aligned_cols=47  Identities=13%  Similarity=0.164  Sum_probs=38.7

Q ss_pred             cCchhHHHHHHHHHhhhCCCccCCCCCChhhHHHHHHHHHHHHHhhhhhccc
Q 004595          688 IEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTHL  739 (743)
Q Consensus       688 vtp~qVKKAYRKAiLkVHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~~  739 (743)
                      ++|.+|+++.+|-++++||||-.. +++.    -|...|..|+.||+|.+.-
T Consensus        58 a~~~qi~kah~kkv~kyHPDk~aa-~g~~----~~d~fFk~iqkA~evL~D~  104 (379)
T COG5269          58 AIPPQILKAHKKKVYKYHPDKTAA-GGNK----GCDEFFKLIQKAREVLGDR  104 (379)
T ss_pred             CCcHHHHHHHHHHHHHhCccchhc-cCCC----CcHHHHHHHHHHHHHhccH
Confidence            568899999999999999999844 3333    2679999999999998753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	743
3ag7_A	106	An Auxilin-Like J-Domain Containing Protein, Jac1 J		4e-33
1n4c_A	182	Nmr Structure Of The J-Domain And Clathrin Substrat		2e-11
1xi5_J	114	Clathrin D6 Coat With Auxilin J-Domain Length = 114		2e-10
2qwn_B	94	Crystal Structure Of Disulfide-Bond-Crosslinked Com		1e-09
2qwo_B	92	Crystal Structure Of Disulfide-Bond-Crosslinked Com		1e-09
1nz6_A	101	Crystal Structure Of Auxilin J-Domain Length = 101		2e-09

>pdb|3AG7|A Chain A, An Auxilin-Like J-Domain Containing Protein, Jac1 J-Domain Length = 106

Iteration: 1
 Score =  139 bits (351), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 63/85 (74%), Positives = 74/85 (87%)
Query: 642 QEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKAL 701
           +E + ID +IRKWS+GK GNIRSLLSTLQYILW  SGWKPVPL+D+IEGNAV++SYQ+AL
Sbjct: 6   EEIKNIDAKIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVPLMDMIEGNAVRKSYQRAL 65
Query: 702 LCLHPDKLQQKGATCQQTYIAEKVL 726
           L LHPDKLQQKGA+  Q Y+AEKV 
Sbjct: 66  LILHPDKLQQKGASANQKYMAEKVF 90

>pdb|1N4C|A Chain A, Nmr Structure Of The J-Domain And Clathrin Substrate Binding Domain Of Bovine Auxilin Length = 182

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 649 VQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKALLCLHPD 707
           ++I +W  GKE NIR+LLST+  +LW   + WKPV + D++    VK+ Y+KA+L +HPD
Sbjct: 89  LKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPD 148
Query: 708 K 708
           K
Sbjct: 149 K 149

>pdb|1XI5|J Chain J, Clathrin D6 Coat With Auxilin J-Domain Length = 114

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 642 QEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKA 700
           +E     ++I +W  GKE NIR+LLST+  +LW   + WKPV + D++    VK+ Y+KA
Sbjct: 14  KEMDPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKA 73
Query: 701 LLCLHPDK 708
           +L +HPDK
Sbjct: 74  VLVVHPDK 81

>pdb|2QWN|B Chain B, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi State Length = 94

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 6/70 (8%)
Query: 640 DPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQ 698
           DP++     ++I +W  GKE NIR+LLST+  +LW   + WKPV + D++    VK+ Y+
Sbjct: 2   DPEK-----LKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYR 56
Query: 699 KALLCLHPDK 708
           KA+L +HP K
Sbjct: 57  KAVLVVHPCK 66

>pdb|2QWO|B Chain B, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin (810-910aa)d876c In The AdpPi Form #1 Length = 92

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 6/70 (8%)
Query: 640 DPQEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQ 698
           DP++     ++I +W  GKE NIR+LLST+  +LW   + WKPV + D++    VK+ Y+
Sbjct: 1   DPEK-----LKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYR 55
Query: 699 KALLCLHPDK 708
           KA+L +HP K
Sbjct: 56  KAVLVVHPCK 65

>pdb|1NZ6|A Chain A, Crystal Structure Of Auxilin J-Domain Length = 101

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 642 QEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKA 700
           +E     ++I +W  GKE NIR+LLST   +LW   + WKPV   D++    VK+ Y+KA
Sbjct: 1   KEMDPEKLKILEWIEGKERNIRALLSTXHTVLWAGETKWKPVGXADLVTPEQVKKVYRKA 60
Query: 701 LLCLHPDK 708
           +L +HPDK
Sbjct: 61  VLVVHPDK 68

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	743
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	8e-29
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	8e-24
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	8e-20
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana} Length = 106

 Score =  110 bits (275), Expect = 8e-29
 Identities = 63/84 (75%), Positives = 74/84 (88%)

Query: 642 QEFQAIDVQIRKWSNGKEGNIRSLLSTLQYILWPASGWKPVPLVDIIEGNAVKRSYQKAL 701
           +E + ID +IRKWS+GK GNIRSLLSTLQYILW  SGWKPVPL+D+IEGNAV++SYQ+AL
Sbjct: 6   EEIKNIDAKIRKWSSGKSGNIRSLLSTLQYILWSGSGWKPVPLMDMIEGNAVRKSYQRAL 65

Query: 702 LCLHPDKLQQKGATCQQTYIAEKV 725
           L LHPDKLQQKGA+  Q Y+AEKV
Sbjct: 66  LILHPDKLQQKGASANQKYMAEKV 89

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A Length = 92

 Score = 95.1 bits (236), Expect = 8e-24
 Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 5/80 (6%)

Query: 647 IDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKALLCLH 705
             ++I +W  GKE NIR+LLST+  +LW   + WKPV + D++    VK+ Y+KA+L +H
Sbjct: 3   EKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVH 62

Query: 706 PDKLQQKGATCQQTYIAEKV 725
           P K   +         A+ +
Sbjct: 63  PCKATGQ----PYEQYAKMI 78

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J Length = 182

 Score = 86.8 bits (214), Expect = 8e-20
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 5/141 (3%)

Query: 586 SSSTASASEYLASPLNESGGNGSKETGDIDKSFQGNSLVNQVTKDDNKLRKLGNDPQEFQ 645
           SS     +E   +  N  G   + +  D+      N+  ++         +     +E  
Sbjct: 26  SSMPGGQNERGKAAANLEGKQKAADFEDLLSGQGFNAHKDKKGPRTIAEMRKEEMAKEMD 85

Query: 646 AIDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKALLCL 704
              ++I +W  GKE NIR+LLST+  +LW   + WKPV + D++    VK+ Y+KA+L +
Sbjct: 86  PEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVV 145

Query: 705 HPDKLQQKGATCQQTYIAEKV 725
           HPDK   +         A+ +
Sbjct: 146 HPDKATGQ----PYEQYAKMI 162

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.9 bits (113), Expect = 1e-05
 Identities = 47/350 (13%), Positives = 93/350 (26%), Gaps = 108/350 (30%)

Query: 416 HYERSNEEMNKNASEKESKVKCTKKSSVVPYFSKNKKK----QDV---------KRECGE 462
           H+   + E        E + +      ++  F          +DV         K E   
Sbjct: 3   HHHHMDFETG------EHQYQYKD---ILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDH 53

Query: 463 VGKGGLQGSPMNSKDLCKTGVRGKVKEFVKIFNQEGLSKSKINVDPQSKSSRWKGTGNSK 522
           +         ++        +  K +E V+ F +E L   +IN         +  +    
Sbjct: 54  IIM---SKDAVSGTLRLFWTLLSKQEEMVQKFVEEVL---RINYK-------FLMSPIKT 100

Query: 523 PEKDANFSKIAPDGKIHKSTEHEKKSFPDTPIMVNGNLPHSEKQLAATNTTNHMSNGTPE 582
            ++        P        E   + + D  +    N+   +  L        +    P 
Sbjct: 101 EQRQ-------PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQ---ALLELRPA 150

Query: 583 WKDSSSTASASEYLASPLNESGGNGSKETGDIDKSFQGNSLVNQVTKDDNKLRKLGNDPQ 642
                      + +   ++   G+G        K+     +   V        K+    +
Sbjct: 151 -----------KNVL--IDGVLGSG--------KT----WVALDVCLSYKVQCKMDF--K 183

Query: 643 EFQAIDVQIRKWSN-GKEGNIRSLLSTLQ---YILWP-----ASGWKPVPLVDIIEGNAV 693
            F         W N     +  ++L  LQ   Y + P     +     + L  I    A 
Sbjct: 184 IF---------WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKL-RIHSIQAE 233

Query: 694 KR------SYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST 737
            R       Y+  LL L    +Q                + C+   L++T
Sbjct: 234 LRRLLKSKPYENCLLVL--LNVQNAK-------AWNAFNLSCKI--LLTT 272

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	743
d1nz6a_	98	a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [T	2e-17

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]} Length = 98

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 75.7 bits (186), Expect = 2e-17
 Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 1/63 (1%)

Query: 647 IDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKALLCLH 705
             ++I +W  GKE NIR+LLST+  +LW   + WKPV + D++    VK+ Y+KA+L +H
Sbjct: 3   EKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVH 62

Query: 706 PDK 708
           PDK
Sbjct: 63  PDK 65

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	743
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.91
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	98.64
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	98.52
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	98.51
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	98.41
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	98.29
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	98.24
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	98.12

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.91  E-value=6e-25  Score=166.49  Aligned_cols=91  Identities=33%  Similarity=0.586  Sum_probs=82.7

Q ss_pred             HHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC-CCCEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
Q ss_conf             78999999862588771999995186224899-99600365555671247899999886508986477888814479999
Q 004595          645 QAIDVQIRKWSNGKEGNIRSLLSTLQYILWPA-SGWKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAE  723 (743)
Q Consensus       645 d~Id~KI~~Ws~GKe~NIRALLSTL~~VLWe~-sgWKpVgIsdLVtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe  723 (743)
                      |.++.+|..|++|+++|||+||++||.|||++ +.|+++||.+++++++||++||++++.+||||++..    ..+.+|+
T Consensus         1 d~~~~~i~~W~~~~~~~ir~lL~~l~~vl~~~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~----~~~~~a~   76 (98)
T d1nz6a_           1 DPEKLKILEWIEGKERNIRALLSTMHTVLWAGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQ----PYEQYAK   76 (98)
T ss_dssp             CHHHHHHHHHHTTTTTCHHHHHTTGGGTSCTTCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTS----TTHHHHH
T ss_pred             CHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH----HHHHHHH
T ss_conf             929999999981455639999986666417765688556877668999999999999998664448980----8898889


Q ss_pred             HHHHHHHHHHHHHCCC
Q ss_conf             9999999854232021
Q 004595          724 KVLIFCRRHGLISTHL  739 (743)
Q Consensus       724 ~VF~~LNEAYEV~~~~  739 (743)
                      .+|..|++||+|...-
T Consensus        77 ~~f~~I~~Ay~~L~d~   92 (98)
T d1nz6a_          77 MIFMELNDAWSEFENQ   92 (98)
T ss_dssp             HHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHCCH
T ss_conf             9999999999997899

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.64  E-value=1.5e-08  Score=67.37  Aligned_cols=59  Identities=19%  Similarity=0.152  Sum_probs=49.6

Q ss_pred             CEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             600365555671247899999886508986477888814479999999999985423202
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  738 (743)
Q Consensus       679 WKpVgIsdLVtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~  738 (743)
                      +.-+++..-++..+||++|+++++.+||||++.. ...+.+..|+.+|..|++||+|-..
T Consensus        19 Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~-~~~~~~~~a~~~f~~I~~Ay~vL~d   77 (94)
T d1wjza_          19 YSILGADPSANMSDLKQKYQKLILLYHPDKQSAD-VPAGTMEECMQKFIEIDQAWKILGN   77 (94)
T ss_dssp             HHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTT-CCHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred             HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             9883999995999999999999987103213453-1388888889999999999999499

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=98.52  E-value=7e-08  Score=63.35  Aligned_cols=53  Identities=17%  Similarity=0.251  Sum_probs=44.5

Q ss_pred             CEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             600365555671247899999886508986477888814479999999999985423202
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  738 (743)
Q Consensus       679 WKpVgIsdLVtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~  738 (743)
                      +.-+||..-++..+||+|||++++.+||||++...       .++..|..|++||+|-..
T Consensus         6 Y~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~-------~~~~~f~~i~~Ay~vL~d   58 (75)
T d1xbla_           6 YEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDK-------EAEAKFKEIKEAYEVLTD   58 (75)
T ss_dssp             TTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTC-------HHHHHHHHHHHHHHHTTS
T ss_pred             HHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCH-------HHHHHHHHHHHHHHHCCC
T ss_conf             99809899969999999999998650230068971-------799999999888970288

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=3.5e-08  Score=65.17  Aligned_cols=53  Identities=19%  Similarity=0.092  Sum_probs=44.6

Q ss_pred             CEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             60036555567124789999988650898647788881447999999999998542320
Q 004595          679 WKPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       679 WKpVgIsdLVtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      |+-+++..-++..+||+|||++++.+||||++..      .-.|+..|..|++||++..
T Consensus        19 y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~------~~~a~~~f~~i~~Ay~~L~   71 (88)
T d1iura_          19 TSVVEQAWKLPESERKKIIRRLYLKWHPDKNPEN------HDIANEVFKHLQNEINRLE   71 (88)
T ss_dssp             HHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSC------HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH------HHHHHHHHHHHHHHHHHHH
T ss_conf             9995998898999999999999998650014100------2689999999999999998

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=98.41  E-value=2.9e-08  Score=65.65  Aligned_cols=46  Identities=17%  Similarity=0.087  Sum_probs=36.3

Q ss_pred             CCCCCCC--CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             3655556--71247899999886508986477888814479999999999985423202
Q 004595          682 VPLVDII--EGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  738 (743)
Q Consensus       682 VgIsdLV--tPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~  738 (743)
                      +||..-+  +..+||+||||+++++||||++.           ...|..|++||+|-..
T Consensus        14 LGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~-----------~e~F~~I~~AY~vLsd   61 (114)
T d1gh6a_          14 LGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----------EEKMKKMNTLYKKMED   61 (114)
T ss_dssp             TTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT-----------TTTTHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH-----------HHHHHHHHHHHHHHCC
T ss_conf             09998878899999999999998715430136-----------8999999879887078

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=98.29  E-value=5.3e-07  Score=58.02  Aligned_cols=50  Identities=16%  Similarity=0.142  Sum_probs=42.2

Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             5671247899999886508986477888814479999999999985423202
Q 004595          687 IIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  738 (743)
Q Consensus       687 LVtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~  738 (743)
                      -++..+||++||++++.+||||..+.  +.+.+-+|+..|..||+||+|-.+
T Consensus        14 ~~d~~eIk~aYr~l~~~~HPDk~~~~--~~~~~~~a~~~~~~i~~Ay~vL~d   63 (76)
T d1fpoa1          14 QLDTQALSLRFQDLQRQYHPDKFASG--SQAEQLAAVQQSATINQAWQTLRH   63 (76)
T ss_dssp             CCCHHHHHHHHHHHHHHTCGGGGTTS--CHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             98999999999999998482004421--389999899999999999999199

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=98.24  E-value=4.4e-07  Score=58.52  Aligned_cols=45  Identities=18%  Similarity=0.112  Sum_probs=35.9

Q ss_pred             CCCCC--CCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             36555--567124789999988650898647788881447999999999998542320
Q 004595          682 VPLVD--IIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLIST  737 (743)
Q Consensus       682 VgIsd--LVtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~  737 (743)
                      .|+..  -.+..+||+|||++++.+||||...           +..|..||+||++-.
T Consensus        17 Lgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g~-----------~e~~~~in~Ay~~L~   63 (79)
T d1fafa_          17 LKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS-----------HALMQELNSLWGTFK   63 (79)
T ss_dssp             HTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC-----------HHHHHHHHHHHHHHH
T ss_pred             HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-----------HHHHHHHHHHHHHHC
T ss_conf             09997889899999999999999867243888-----------999999999999977

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=1.8e-06  Score=54.84  Aligned_cols=51  Identities=24%  Similarity=0.315  Sum_probs=42.4

Q ss_pred             EECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             00365555671247899999886508986477888814479999999999985423202
Q 004595          680 KPVPLVDIIEGNAVKRSYQKALLCLHPDKLQQKGATCQQTYIAEKVLIFCRRHGLISTH  738 (743)
Q Consensus       680 KpVgIsdLVtPaqVKKAYRKAiLkvHPDKl~q~~at~EQk~IAe~VF~~LNEAYEV~~~  738 (743)
                      +-+++..-++..+||++|+++++.+||||.....        +...|..|++||+|-+.
T Consensus         7 ~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~~~--------~~~~~~~i~~Ay~vLsd   57 (77)
T d1hdja_           7 QTLGLARGASDEEIKRAYRRQALRYHPDKNKEPG--------AEEKFKEIAEAYDVLSD   57 (77)
T ss_dssp             HHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTT--------HHHHHHHHHHHHHHTTC
T ss_pred             HHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHH--------HHHHHHHHHHHHHHHCC
T ss_conf             8859999959999999999999874610134466--------99999999999988568