Citrus Sinensis ID: 004659

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------74
MATKTQTESNENPNGDSTEERCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCTLLIFLNTFFTFRTQPLTISAILMQIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIITIFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVDPVEMWWPSNLAQVSLFRALHEKESKSKGLTRMQFFLIVLAASFAYYSLPGYLFPILTFFSWVCWAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWKFDTFDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFYVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQLVGTIVSGVVNLGVAWWMLESIENICDVESLHPDSQWTCPKYRVTFDASVIWGLIGPRRLFGPGGMYRNLVWLFLVGAVLPVPVWVLSKVFPEKKWIPLINIPVISYGFAGMPPATPTNIASWLITGMIFNYFVFRYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNNDINLKWWGTHVDHCPLATCPTAPGIAVEGCPVFK
cccccccccccccccccccccccHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccEEEcccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccEEEccccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHccccccccccccHHHHcccccccEEEEccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHcccccEEEcEEEccccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccccHHHHHHHHccccccHHHHHHHHHHHHHHHHEEEEEccccccHHHHHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHccHHEEEEEcccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccc
ccccccccccccccccccccccccHHEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEHHHHHHHHHcHHHHHHHHHccccEEEcccEEEEcccccccHHHEEEEEEEHHHHHEcccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEccccEEEEEEccccccccEEEEEEcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHEEccccEccccccccccccccccccEEcEEEEEcccccccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccHEEEEEEcccccccEHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEEEEEEEEEcccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccEEEccccccc
matktqtesnenpngdsteercpieevalivpetddptmpvmTFRAWFLGLTSCTLLIFLNtfftfrtqpLTISAILMQIAVLPIGKFmarilpnkefqvlgwrfslnpgpfnikeHVIITIFAncgvsfgggdaysIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLvdpvemwwpsnlAQVSLFRALHEkeskskgltRMQFFLIVLAASFAyyslpgylfpiLTFFSwvcwawphsitaqqigsgyhglgigaftldwagisayhgsplvtpwtsilnvGIGFVMFIYIIVPLcywkfdtfdarkfpifsnqlftssghkydttkiltpqydlnipaynsygklylsplfalsigsgfarFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFYVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIgviqattnqqpgydIIAQFMigyvlpgkpiANLLFKIYGRISTIHALSFLsdlklghymkipprcmytAQLVGTIVSGVVNLGVAWWMLESIEnicdveslhpdsqwtcpkyrvtfdasviwgligprrlfgpggmyRNLVWLFLVGAVLPVPVWVLskvfpekkwiplinipvisygfagmppatptnIASWLITGMIFNYFVFRYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNndinlkwwgthvdhcplatcptapgiavegcpvfk
matktqtesnenpngdsteercpIEEVALivpetddptmPVMTFRAWFLGLTSCTLLIFLNTFFTFRTQPLTISAILMQIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIITIFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVDPVEMWWPSNLAQVSLFRALHEKESKSKGLTRMQFFLIVLAASFAYYSLPGYLFPILTFFSWVCWAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWKFDTFDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFYVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQLVGTIVSGVVNLGVAWWMLESIENICDVESLHPDSQWTCPKYRVTFDASVIWGLIGPRRLFGPGGMYRNLVWLFLVGAVLPVPVWVLSKVFPEKKWIPLINIPVISYGFAGMPPATPTNIASWLITGMIFNYFVFRYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNNDINLKWWGTHVDHCPLATCPTAPGIAVEGCPVFK
MATKTQTESNENPNGDSTEERCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCtlliflntfftfrtQPLTISAILMQIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIITIFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVDPVEMWWPSNLAQVSLFRALHEKESKSKGLTRMQFFLIVLAASFAYYSLPGYLFPILTFFSWVCWAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWKFDTFDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFYVlllgsiglsllMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQLVGTIVSGVVNLGVAWWMLESIENICDVESLHPDSQWTCPKYRVTFDASVIWGLIGPRRLFGPGGMYRNLVWLFLVGAVLPVPVWVLSKVFPEKKWIPLINIPVISYGFAGMPPATPTNIASWLITGMIFNYFVFRYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNNDINLKWWGTHVDHCPLATCPTAPGIAVEGCPVFK
***********************IEEVALIVPETDDPTMPVMTFRAWFLGLTSCTLLIFLNTFFTFRTQPLTISAILMQIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIITIFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVDPVEMWWPSNLAQVSLFRALHEK****KGLTRMQFFLIVLAASFAYYSLPGYLFPILTFFSWVCWAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWKFDTFDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFYVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQLVGTIVSGVVNLGVAWWMLESIENICDVESLHPDSQWTCPKYRVTFDASVIWGLIGPRRLFGPGGMYRNLVWLFLVGAVLPVPVWVLSKVFPEKKWIPLINIPVISYGFAGMPPATPTNIASWLITGMIFNYFVFRYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNNDINLKWWGTHVDHCPLATCPTAPGIAVEGCPV**
********************RCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCTLLIFLNTFFTFRTQPLTISAILMQIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIITIFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVDPVEMWWPSNLAQVSLFRA***********TRMQFFLIVLAASFAYYSLPGYLFPILTFFSWVCWAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWKFDTFDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFYVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQLVGTIVSGVVNLGVAWWMLESIENICDVESLHPDSQWTCPKYRVTFDASVIWGLIGPRRLFGPGGMYRNLVWLFLVGAVLPVPVWVLSKVFPEKKWIPLINIPVISYGFAGMPPATPTNIASWLITGMIFNYFVFRYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNNDINLKWWGTHVDHCPLATCPTAPGIAVEGCPVF*
*******************ERCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCTLLIFLNTFFTFRTQPLTISAILMQIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIITIFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVDPVEMWWPSNLAQVSLFRALHEKESKSKGLTRMQFFLIVLAASFAYYSLPGYLFPILTFFSWVCWAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWKFDTFDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFYVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQLVGTIVSGVVNLGVAWWMLESIENICDVESLHPDSQWTCPKYRVTFDASVIWGLIGPRRLFGPGGMYRNLVWLFLVGAVLPVPVWVLSKVFPEKKWIPLINIPVISYGFAGMPPATPTNIASWLITGMIFNYFVFRYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNNDINLKWWGTHVDHCPLATCPTAPGIAVEGCPVFK
********************RCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCTLLIFLNTFFTFRTQPLTISAILMQIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIITIFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVDPVEMWWPSNLAQVSLFRALHEKESKSKGLTRMQFFLIVLAASFAYYSLPGYLFPILTFFSWVCWAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWKFDTFDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFYVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQLVGTIVSGVVNLGVAWWMLESIENICDVESLHPDSQWTCPKYRVTFDASVIWGLIGPRRLFGPGGMYRNLVWLFLVGAVLPVPVWVLSKVFPEKKWIPLINIPVISYGFAGMPPATPTNIASWLITGMIFNYFVFRYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNNDINLKWWGTHVDHCPLATCPTAPGIAVEGCPVFK
oooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MATKTQTESNENPNGDSTEERCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCTLLIFLNTFFTFRTQPLTISAILMQIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIITIFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVDPVEMWWPSNLAQVSLFRALHEKESKSKGLTRMQFFLIVLAASFAYYSLPGYLFPILTFFSWVCWAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWKFDTFDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFYVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQLVGTIVSGVVNLGVAWWMLESIENICDVESLHPDSQWTCPKYRVTFDASVIWGLIGPRRLFGPGGMYRNLVWLFLVGAVLPVPVWVLSKVFPEKKWIPLINIPVISYGFAGMPPATPTNIASWLITGMIFNYFVFRYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNNDINLKWWGTHVDHCPLATCPTAPGIAVEGCPVFK
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query739 2.2.26 [Sep-21-2011]
O23482737 Oligopeptide transporter yes no 0.994 0.997 0.843 0.0
Q9FME8729 Oligopeptide transporter no no 0.971 0.984 0.566 0.0
O04514734 Oligopeptide transporter no no 0.976 0.983 0.552 0.0
O82485766 Oligopeptide transporter no no 0.958 0.924 0.561 0.0
Q9T095736 Oligopeptide transporter no no 0.985 0.989 0.538 0.0
Q9SUA4753 Oligopeptide transporter no no 0.962 0.944 0.537 0.0
Q9FJD1733 Oligopeptide transporter no no 0.981 0.989 0.509 0.0
Q9FG72755 Oligopeptide transporter no no 0.986 0.965 0.516 0.0
Q9FJD2741 Oligopeptide transporter no no 0.974 0.971 0.525 0.0
P40900785 Sexual differentiation pr yes no 0.941 0.886 0.379 1e-140
>sp|O23482|OPT3_ARATH Oligopeptide transporter 3 OS=Arabidopsis thaliana GN=OPT3 PE=2 SV=3 Back     alignment and function desciption
 Score = 1311 bits (3394), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/737 (84%), Positives = 686/737 (93%), Gaps = 2/737 (0%)

Query: 2   ATKTQTESNENPNGDSTEERCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCTLLIFLN 61
           A K   ++N + + D   ERCP+EEVAL+VPETDDP++PVMTFRAWFLGLTSC LLIFLN
Sbjct: 3   AEKATDKTNVHLSSD--HERCPVEEVALVVPETDDPSLPVMTFRAWFLGLTSCVLLIFLN 60

Query: 62  TFFTFRTQPLTISAILMQIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIIT 121
           TFFT+RTQPLTISAILMQIAVLPIGKFMAR LP     +LGW FSLNPGPFNIKEHVIIT
Sbjct: 61  TFFTYRTQPLTISAILMQIAVLPIGKFMARTLPTTSHNLLGWSFSLNPGPFNIKEHVIIT 120

Query: 122 IFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVD 181
           IFANCGV++GGGDAYSIGAITVMKAYYKQSL+F+CGL IVLTTQILGYGWAG+LRRYLVD
Sbjct: 121 IFANCGVAYGGGDAYSIGAITVMKAYYKQSLSFICGLFIVLTTQILGYGWAGILRRYLVD 180

Query: 182 PVEMWWPSNLAQVSLFRALHEKESKSKGLTRMQFFLIVLAASFAYYSLPGYLFPILTFFS 241
           PV+MWWPSNLAQVSLFRALHEKE+KSKGLTRM+FFL+ L ASF YY+LPGYLFPILTFFS
Sbjct: 181 PVDMWWPSNLAQVSLFRALHEKENKSKGLTRMKFFLVALGASFIYYALPGYLFPILTFFS 240

Query: 242 WVCWAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFI 301
           WVCWAWP+SITAQQ+GSGYHGLG+GAFTLDWAGISAYHGSPLV PW+SILNVG+GF+MFI
Sbjct: 241 WVCWAWPNSITAQQVGSGYHGLGVGAFTLDWAGISAYHGSPLVAPWSSILNVGVGFIMFI 300

Query: 302 YIIVPLCYWKFDTFDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLS 361
           YIIVP+CYWKF+TFDARKFPIFSNQLFT+SG KYDTTKILTPQ+DL+I AYN+YGKLYLS
Sbjct: 301 YIIVPVCYWKFNTFDARKFPIFSNQLFTTSGQKYDTTKILTPQFDLDIGAYNNYGKLYLS 360

Query: 362 PLFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWF 421
           PLFALSIGSGFARFT+TLTHVALF+G  I +Q+ SA+   KLD+H +LM+SYK+VP+WWF
Sbjct: 361 PLFALSIGSGFARFTATLTHVALFNGRDIWKQTWSAVNTTKLDIHGKLMQSYKKVPEWWF 420

Query: 422 YVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIA 481
           Y+LL GS+ +SLLMSFVWK+ VQL WWGMLFAFALA+IVTLPIGVIQATTNQQPGYDII 
Sbjct: 421 YILLAGSVAMSLLMSFVWKESVQLPWWGMLFAFALAFIVTLPIGVIQATTNQQPGYDIIG 480

Query: 482 QFMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQLVGTIVS 541
           QF+IGY+LPGKPIANL+FKIYGRIST+HALSFL+DLKLGHYMKIPPRCMYTAQLVGT+V+
Sbjct: 481 QFIIGYILPGKPIANLIFKIYGRISTVHALSFLADLKLGHYMKIPPRCMYTAQLVGTVVA 540

Query: 542 GVVNLGVAWWMLESIENICDVESLHPDSQWTCPKYRVTFDASVIWGLIGPRRLFGPGGMY 601
           GVVNLGVAWWMLESI++ICD+E  HP+S WTCPKYRVTFDASVIWGLIGPRRLFGPGGMY
Sbjct: 541 GVVNLGVAWWMLESIQDICDIEGDHPNSPWTCPKYRVTFDASVIWGLIGPRRLFGPGGMY 600

Query: 602 RNLVWLFLVGAVLPVPVWVLSKVFPEKKWIPLINIPVISYGFAGMPPATPTNIASWLITG 661
           RNLVWLFL+GAVLPVPVW LSK+FP KKWIPLINIPVISYGFAGMPPATPTNIASWL+TG
Sbjct: 601 RNLVWLFLIGAVLPVPVWALSKIFPNKKWIPLINIPVISYGFAGMPPATPTNIASWLVTG 660

Query: 662 MIFNYFVFRYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNNDINLKWWGTHVDHCPL 721
            IFNYFVF YHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQN   +LKWWGT VDHCPL
Sbjct: 661 TIFNYFVFNYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNAGHDLKWWGTEVDHCPL 720

Query: 722 ATCPTAPGIAVEGCPVF 738
           A+CPTAPGI  +GCPVF
Sbjct: 721 ASCPTAPGIKAKGCPVF 737
May be involved in the translocation of tetra- and pentapeptides across the cellular membrane in an energy-dependent manner. Acts also as a metal transporter that could be a component of the copper transport machinery. Essential for early embryo development.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9FME8|OPT4_ARATH Oligopeptide transporter 4 OS=Arabidopsis thaliana GN=OPT4 PE=2 SV=1 Back     alignment and function description
>sp|O04514|OPT2_ARATH Oligopeptide transporter 2 OS=Arabidopsis thaliana GN=OPT2 PE=2 SV=2 Back     alignment and function description
>sp|O82485|OPT7_ARATH Oligopeptide transporter 7 OS=Arabidopsis thaliana GN=OPT7 PE=2 SV=1 Back     alignment and function description
>sp|Q9T095|OPT6_ARATH Oligopeptide transporter 6 OS=Arabidopsis thaliana GN=OPT6 PE=2 SV=1 Back     alignment and function description
>sp|Q9SUA4|OPT5_ARATH Oligopeptide transporter 5 OS=Arabidopsis thaliana GN=OPT5 PE=2 SV=1 Back     alignment and function description
>sp|Q9FJD1|OPT8_ARATH Oligopeptide transporter 8 OS=Arabidopsis thaliana GN=OPT8 PE=2 SV=1 Back     alignment and function description
>sp|Q9FG72|OPT1_ARATH Oligopeptide transporter 1 OS=Arabidopsis thaliana GN=OPT1 PE=2 SV=1 Back     alignment and function description
>sp|Q9FJD2|OPT9_ARATH Oligopeptide transporter 9 OS=Arabidopsis thaliana GN=OPT9 PE=2 SV=1 Back     alignment and function description
>sp|P40900|ISP4_SCHPO Sexual differentiation process protein isp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=isp4 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query739
359496107748 PREDICTED: oligopeptide transporter 3-li 0.991 0.979 0.865 0.0
297735875752 unnamed protein product [Vitis vinifera] 0.989 0.972 0.866 0.0
356522077742 PREDICTED: oligopeptide transporter 3-li 0.998 0.994 0.846 0.0
297800510737 hypothetical protein ARALYDRAFT_355122 [ 0.991 0.994 0.849 0.0
332278199737 RecName: Full=Oligopeptide transporter 3 0.994 0.997 0.843 0.0
320097186736 oligopeptide transporter 3 [Noccaea caer 0.991 0.995 0.847 0.0
15451020737 Unknown protein [Arabidopsis thaliana] 0.994 0.997 0.842 0.0
356562022741 PREDICTED: oligopeptide transporter 3-li 1.0 0.997 0.838 0.0
240255930737 oligopeptide transporter [Arabidopsis th 0.994 0.997 0.842 0.0
224089577744 oligopeptide transporter OPT family [Pop 0.997 0.990 0.830 0.0
>gi|359496107|ref|XP_002273768.2| PREDICTED: oligopeptide transporter 3-like [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1340 bits (3467), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/737 (86%), Positives = 688/737 (93%), Gaps = 4/737 (0%)

Query: 3   TKTQTESNENPNGDSTEERCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCTLLIFLNT 62
           T    E+ + P G    ER P+EEVAL+VPETDD T+PVMTFRAWFLG+ SC+LLIFLNT
Sbjct: 16  TTNGKEATQAPEG----ERTPVEEVALVVPETDDQTLPVMTFRAWFLGIISCSLLIFLNT 71

Query: 63  FFTFRTQPLTISAILMQIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIITI 122
           FF++RTQPLTISAILMQIAVLP+GKFMA  LP +EF+V GW FSLNPGPFN+KEHVIIT+
Sbjct: 72  FFSYRTQPLTISAILMQIAVLPVGKFMASTLPRREFKVFGWGFSLNPGPFNMKEHVIITV 131

Query: 123 FANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVDP 182
           FANCGVS+GGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLR+YLV+P
Sbjct: 132 FANCGVSYGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRKYLVEP 191

Query: 183 VEMWWPSNLAQVSLFRALHEKESKSKGLTRMQFFLIVLAASFAYYSLPGYLFPILTFFSW 242
            EMWWPSNLAQVSLFRALHEKESKSKGLTRMQFFL+ L ASF YY+LPGYLFPILTFFSW
Sbjct: 192 AEMWWPSNLAQVSLFRALHEKESKSKGLTRMQFFLLFLMASFFYYALPGYLFPILTFFSW 251

Query: 243 VCWAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIY 302
           VCW WPHSITAQQIGSGYHGLG+GAFTLDWAGISAYHGSPLVTPW SILNVG GF+MFIY
Sbjct: 252 VCWVWPHSITAQQIGSGYHGLGVGAFTLDWAGISAYHGSPLVTPWFSILNVGAGFIMFIY 311

Query: 303 IIVPLCYWKFDTFDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSP 362
           IIVP+CYWKF+TFDARKFPIFSNQLFTS+GHKYDT KILTPQYDLNI AY+ YGKLYLSP
Sbjct: 312 IIVPVCYWKFNTFDARKFPIFSNQLFTSTGHKYDTNKILTPQYDLNIAAYDGYGKLYLSP 371

Query: 363 LFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFY 422
           LFALSIGSGFARFT+TLTHVALFHG  IL QS+SA+ N K+DVHARLMK+YKQVP+WWF 
Sbjct: 372 LFALSIGSGFARFTATLTHVALFHGRDILRQSKSAIHNAKMDVHARLMKNYKQVPEWWFL 431

Query: 423 VLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQ 482
           +LL+GSI LS++M FVWK++VQL WWGMLFAF LAWIVTLPIGVIQATTNQQPGYDIIAQ
Sbjct: 432 ILLIGSIALSIIMCFVWKEDVQLPWWGMLFAFGLAWIVTLPIGVIQATTNQQPGYDIIAQ 491

Query: 483 FMIGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQLVGTIVSG 542
           F+IGYVLPGKPIANLLFKIYGRIST+HALSFLSDLKLGHYMKIPPRCMYTAQLVGT+V+G
Sbjct: 492 FIIGYVLPGKPIANLLFKIYGRISTVHALSFLSDLKLGHYMKIPPRCMYTAQLVGTLVAG 551

Query: 543 VVNLGVAWWMLESIENICDVESLHPDSQWTCPKYRVTFDASVIWGLIGPRRLFGPGGMYR 602
            VNL VAWWML SIENICDVE+LHPDS WTCPK+RVTFDASVIWGLIGPRRLFGPGG+YR
Sbjct: 552 TVNLAVAWWMLGSIENICDVETLHPDSPWTCPKFRVTFDASVIWGLIGPRRLFGPGGLYR 611

Query: 603 NLVWLFLVGAVLPVPVWVLSKVFPEKKWIPLINIPVISYGFAGMPPATPTNIASWLITGM 662
           NLVWLFL+GAVLPVPVWV+SK+FPEKKWIPLINIPVISYGFAGMPPATPTNIASWLITG 
Sbjct: 612 NLVWLFLIGAVLPVPVWVMSKIFPEKKWIPLINIPVISYGFAGMPPATPTNIASWLITGA 671

Query: 663 IFNYFVFRYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNNDINLKWWGTHVDHCPLA 722
           IFNYFVFRYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQN + NLKWWGT +DHCPLA
Sbjct: 672 IFNYFVFRYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNENHNLKWWGTKLDHCPLA 731

Query: 723 TCPTAPGIAVEGCPVFK 739
           TCPT PGI VEGCPVF+
Sbjct: 732 TCPTQPGIVVEGCPVFQ 748

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297735875|emb|CBI18634.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356522077|ref|XP_003529676.1| PREDICTED: oligopeptide transporter 3-like [Glycine max] Back     alignment and taxonomy information
>gi|297800510|ref|XP_002868139.1| hypothetical protein ARALYDRAFT_355122 [Arabidopsis lyrata subsp. lyrata] gi|297313975|gb|EFH44398.1| hypothetical protein ARALYDRAFT_355122 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|332278199|sp|O23482.3|OPT3_ARATH RecName: Full=Oligopeptide transporter 3; Short=AtOPT3 gi|25083021|gb|AAN72034.1| isp4 like protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|320097186|gb|ADW09325.1| oligopeptide transporter 3 [Noccaea caerulescens] Back     alignment and taxonomy information
>gi|15451020|gb|AAK96781.1| Unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356562022|ref|XP_003549274.1| PREDICTED: oligopeptide transporter 3-like [Glycine max] Back     alignment and taxonomy information
>gi|240255930|ref|NP_567493.5| oligopeptide transporter [Arabidopsis thaliana] gi|332658338|gb|AEE83738.1| oligopeptide transporter [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|224089577|ref|XP_002308764.1| oligopeptide transporter OPT family [Populus trichocarpa] gi|222854740|gb|EEE92287.1| oligopeptide transporter OPT family [Populus trichocarpa] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P40897OPT1_YEASTNo assigned EC number0.34120.92820.8585yesno
O23482OPT3_ARATHNo assigned EC number0.84390.99450.9972yesno
P40900ISP4_SCHPONo assigned EC number0.37980.94180.8866yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh1_pg.C_scaffold_7002295
annotation not avaliable (737 aa)
(Arabidopsis lyrata)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query739
TIGR00727681 TIGR00727, ISP4_OPT, small oligopeptide transporte 0.0
pfam03169619 pfam03169, OPT, OPT oligopeptide transporter prote 1e-168
TIGR00728606 TIGR00728, OPT_sfam, oligopeptide transporter, OPT 1e-154
>gnl|CDD|129810 TIGR00727, ISP4_OPT, small oligopeptide transporter, OPT family Back     alignment and domain information 
 Score =  553 bits (1426), Expect = 0.0
 Identities = 260/694 (37%), Positives = 401/694 (57%), Gaps = 18/694 (2%)

Query: 19  EERCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCTLLIFLNTFFTFRTQPLTISAILM 78
           E   P  EV   VP TDDPT+PV T RAWF+GL   T+    N FF+ R   ++++  ++
Sbjct: 1   EFDSPYPEVRAAVPPTDDPTIPVNTIRAWFIGLIWSTVGSGFNMFFSHRVPSISLNTPII 60

Query: 79  QIAVLPIGKFMARILPNKEFQVLGWRFSLNPGPFNIKEHVIITIFANCGVSFGGGDAYSI 138
           Q+   P GK  A+I+P+    + G ++++ PGPFN+KEH+ IT+     VSFG   AY+ 
Sbjct: 61  QMLAYPCGKAWAKIIPDWTITIRGRKYNIIPGPFNVKEHMFITLMYA--VSFG--AAYTT 116

Query: 139 GAITVMKAYYKQSLNFLCGLLIVLTTQILGYGWAGMLRRYLVDPVEMWWPSNLAQVSLFR 198
             I   K +YK +  F    L+ L+TQ +G+G+AG+LRR++V P    WP+NL  +++ +
Sbjct: 117 DIILAQKLFYKSAFGFGYQFLLSLSTQFIGFGFAGILRRFVVYPARALWPTNLVTITINK 176

Query: 199 ALHEKESKSKG---LTRMQFFLIVLAASFAYYSLPGYLFPILTFFSWVCWAWPHSITAQQ 255
           ALH KE+       ++R +FF +V  ASF +   P Y+F  L+ F+W+ W  P++I   Q
Sbjct: 177 ALHGKENHEANGWKISRYKFFFLVFFASFIWNWFPTYIFQALSTFNWMTWIKPNNINLNQ 236

Query: 256 IGSGYHGLGIG-AFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWKFDT 314
           I  G  GLGI    + DW  IS Y  SPLV P  S L + +G ++  +I++P  Y+  +T
Sbjct: 237 IFGGSTGLGINPISSFDWNQISGYINSPLVYPAWSYLTIYLGCILAFWIVIPAVYYS-NT 295

Query: 315 FDARKFPIFSNQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSGFAR 374
           +  +  PI SN L+ + GH Y+ T+IL      ++  Y SY   + S   A+S G  FA 
Sbjct: 296 WYCQYLPISSNGLYDNFGHSYNVTEILDKDNKFDVKKYQSYSPPFYSTTNAVSYGLSFAS 355

Query: 375 FTSTLTHVALFHGSAILEQSRSAMKNMKLDVHARLMKSYKQVPQWWFYVLLLGSIGLSLL 434
               +TH  + HG  +    +        D H+ LMK+YK+VP WW+  + LG  G+ + 
Sbjct: 356 IPLMITHSIIVHGKLLFNALKDDDYP---DPHSNLMKAYKEVPDWWYLAVFLGFFGMGIA 412

Query: 435 MSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQFMIGYVLPGKPI 494
               W  E     WG+       ++  +P  ++QATTN   G +++ +F++GY LPG+P+
Sbjct: 413 TVEHWPTE--TPVWGLFVCLIFNFVFLIPTTILQATTNISFGLNVLTEFIVGYALPGRPL 470

Query: 495 ANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQLVGTIVSGVVNLGVAWWMLE 554
           A ++FK +G I+   A +F+SDLK+GHYMKIPPR ++  Q V TI    V +GV  W + 
Sbjct: 471 AMMIFKTFGYITDGQADNFVSDLKIGHYMKIPPRALFRGQCVATIWQIFVQIGVLNWAIG 530

Query: 555 SIENICDVESLHPDSQWTCPKYRVTFDASVIWGLIGPRRLFGPGGMYRNLVWLFLVGAVL 614
           +I+N C   +   ++++TCP   V F+ASVIWG+IGP+R+F  G +Y  L W +L+GA +
Sbjct: 531 NIDNFC---TADQNAKYTCPNAVVFFNASVIWGVIGPKRIFSHGYIYPGLKWFWLIGACI 587

Query: 615 PVPVWVLSKVFPEKKWIPLINIPVISYGFAGMPPATPTNIASWLITGMIFNYFVFRYHKR 674
            +  W++ K +P K +   ++ P++  G   +PPATP N   +   G+ F Y++ ++H  
Sbjct: 588 GIFFWLVWKKWP-KFYPRYLDWPMLFVGTGYIPPATPYNYMYYTSVGLFFQYYMKKHHLN 646

Query: 675 WWQKYNYVLSAALDAGTAFMGVLLFFALQNNDIN 708
           WW+KYNYVLSA LD G     +++FF LQ  D  
Sbjct: 647 WWEKYNYVLSAGLDTGLVLSAIIIFFCLQLKDTA 680

This model represents a family of transporters of small oligopeptides, demonstrated experimentally in three different species of yeast. A set of related proteins from the plant Arabidopsis thaliana forms an outgroup to the yeast set by neighbor joining analysis but is remarkably well conserved and is predicted here to have equivalent function [Transport and binding proteins, Amino acids, peptides and amines]. Length = 681
>gnl|CDD|217401 pfam03169, OPT, OPT oligopeptide transporter protein Back     alignment and domain information
>gnl|CDD|233105 TIGR00728, OPT_sfam, oligopeptide transporter, OPT superfamily Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 739
KOG2262761 consensus Sexual differentiation process protein I 100.0
TIGR00727681 ISP4_OPT small oligopeptide transporter, OPT famil 100.0
TIGR00728654 OPT_sfam oligopeptide transporters, OPT superfamil 100.0
PF03169624 OPT: OPT oligopeptide transporter protein; InterPr 100.0
TIGR00733591 putative oligopeptide transporter, OPT family. Thi 100.0
COG1297624 Predicted membrane protein [Function unknown] 100.0
PF03169624 OPT: OPT oligopeptide transporter protein; InterPr 93.68
TIGR00733 591 putative oligopeptide transporter, OPT family. Thi 85.24
>KOG2262 consensus Sexual differentiation process protein ISP4 [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=5e-185  Score=1511.25  Aligned_cols=721  Identities=61%  Similarity=1.160  Sum_probs=702.5

Q ss_pred             ccCCCCCCCCCCCCCCchhhhhhcCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHhhhccccccccchHHHHHHHHHHHH
Q 004659            7 TESNENPNGDSTEERCPIEEVALIVPETDDPTMPVMTFRAWFLGLTSCTLLIFLNTFFTFRTQPLTISAILMQIAVLPIG   86 (739)
Q Consensus         7 ~~~~~~~~~~~~~~~sp~~evr~~v~~~dd~~~p~lT~Ra~~lG~ll~~v~aa~n~yf~lk~g~~~~~s~~~~ll~~~lg   86 (739)
                      .+++||  +++++|||||+|||+.||++|||++|++|||+|++|++.|++++++||+|++|.+.+.++.+.+|++.+|+|
T Consensus        38 ~~~~e~--~~ed~~~spv~EVrl~Vp~tDDptlPv~TfRmW~Lg~~~~iv~a~vNqFF~~R~~~lsis~i~aQi~~~PlG  115 (761)
T KOG2262|consen   38 VIDDEN--ELEDEEDSPVPEVRLTVPPTDDPTLPVLTFRMWFLGLISCIVLAFVNQFFSYRYPPLSISAIVAQIATYPLG  115 (761)
T ss_pred             eccccc--cccccccCcchhheeecCCCCCCCchhHhHHHHHHHHHHHHHHHHHhhhhcccCCCeehHHHHHHHHHHhHH
Confidence            344455  256788999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCCcccc-ccccccccCCCCCCcchhhhheeeecccccccccchhhhHHHHHHHHHhcCCCCHHHHHHHHHHHH
Q 004659           87 KFMARILPNKEFQ-VLGWRFSLNPGPFNIKEHVIITIFANCGVSFGGGDAYSIGAITVMKAYYKQSLNFLCGLLIVLTTQ  165 (739)
Q Consensus        87 ~~l~~~lP~~~~~-~~~~~~~lNpgpf~~kE~~li~~~Asaa~~~~~~~a~a~~~i~~~~~~y~~~~~~~~~il~~ls~~  165 (739)
                      |+|+|++|+|+++ -++|+|+|||||||.|||++++++||++    +|.+|++.++.+|.+||++++++++++++++++|
T Consensus       116 klma~~lP~~~~~~~~~~~fslNPGPFn~KEHvlitIfan~~----sg~aYat~Ii~~~k~fY~~~l~f~~~~ll~lttQ  191 (761)
T KOG2262|consen  116 KLMAKTLPTWKFGLGGRWSFSLNPGPFNVKEHVLITIFANIG----SGTAYATHIITAQKAFYKRNLSFGYAFLLVLTTQ  191 (761)
T ss_pred             HHHHHhCCceeeecCcceEEEeCCCCCcchheeeeehhhhcc----CcchhhhHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence            9999999999999 5789999999999999999999999999    7889999999999999999999999999999999


Q ss_pred             HHHHHHHhhccccccccCCccCcchHHHHHHHHHhhccccccc-cccchHHHHHHHHHHHHHhhcccchhhhhhccchhh
Q 004659          166 ILGYGWAGMLRRYLVDPVEMWWPSNLAQVSLFRALHEKESKSK-GLTRMQFFLIVLAASFAYYSLPGYLFPILTFFSWVC  244 (739)
Q Consensus       166 ~lG~~~Ag~lR~~lV~~~~l~fP~~la~a~l~~aLh~~~~~~~-~~s~~r~f~~~f~~~~v~~~~p~~i~p~L~~~~~~~  244 (739)
                      ++|||+||++||++|+|.+|.||++|.+++|+|+||+++++++ +++|+|||+++|.+||+|+|+|+|+||+|+.++|.|
T Consensus       192 ~lGyGwAGl~Rk~lV~Pa~m~WPsnLvqvsLFraLHeke~~~~g~msR~rFF~ivfv~SFiyY~fPgylF~~Ls~~swvc  271 (761)
T KOG2262|consen  192 LLGYGWAGLFRKYLVYPASMWWPSNLVQVSLFRALHEKENKSKGNMSRYRFFLIVFVASFIYYWFPGYLFPILSSFSWVC  271 (761)
T ss_pred             HhcccHhhhhHhhccCcHhhcCcchhHHHHHHHHHHhhhhhcccCccchhhhhHHHHHHHHHHHhhHHHHHHHhhhheee
Confidence            9999999999999999999999999999999999999987766 599999999999999999999999999999999999


Q ss_pred             hcccCccceeeecccccccccceeeecccccccccCCcccccHHHHHHHHHHHHHHHHHHHHHhhhccCCccCCCCCCCC
Q 004659          245 WAWPHSITAQQIGSGYHGLGIGAFTLDWAGISAYHGSPLVTPWTSILNVGIGFVMFIYIIVPLCYWKFDTFDARKFPIFS  324 (739)
Q Consensus       245 wi~p~~~~~~~i~G~~~GlGl~~~tfDws~i~~~~gspl~~p~~~~~~~~~G~vl~~~ii~P~~y~~~n~w~~~~~P~~s  324 (739)
                      |++|+|.+++||+|+.+|||+.|++|||++|++|+|||+.+|+++.+|.++|.++..||+.|++||+ |.|+.+++|++|
T Consensus       272 W~~P~s~~~~qi~sg~~GLGi~~~tlDW~~IssylgSPLasP~~a~~n~~~gfvl~~~IV~Pi~Y~~-n~~~a~~fPI~S  350 (761)
T KOG2262|consen  272 WIWPSSITANQIGSGLTGLGIGPFTLDWSQISSYLGSPLASPFFAIANVFLGFVLFIYIVLPILYWT-NTYDAKYFPIFS  350 (761)
T ss_pred             EeccccHHHHHhcccccccccccccccHHHHHHHcCCcchhhHHHHHHHhhhhhhhhhhhhhhHhhc-cceecceeceec
Confidence            9999999999999999999999999999999999999999999999999999999999999999999 999999999999


Q ss_pred             ccccccCCcceeceeccCCCCCCChhhhhhcCCccchHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhhhcccch
Q 004659          325 NQLFTSSGHKYDTTKILTPQYDLNIPAYNSYGKLYLSPLFALSIGSGFARFTSTLTHVALFHGSAILEQSRSAMKNMKLD  404 (739)
Q Consensus       325 ~~~~d~~G~~y~~s~v~~~~~~l~~~~y~~~sp~~l~~g~~~~~~~~fa~~~~~i~~~~l~~~k~i~~~~k~~~~~~~~D  404 (739)
                      +++||++|++||+++|+|+|+++|.+|||+|||.||++.+++.||.+||+++|+++|.+|+|+||||+..|... ++++|
T Consensus       351 s~lf~~tG~sYnvt~Il~~~f~ld~~~Y~~ysp~yls~~falsygl~faa~~a~i~Hv~Lf~gkdiw~~~~~~~-~k~~D  429 (761)
T KOG2262|consen  351 SSLFDHTGNSYNVTKILDSKFELDLDKYQEYSPLYLSTFFALSYGLGFAALSATIVHVALFNGKDIWQQTKKAF-NKKMD  429 (761)
T ss_pred             CcceecCCcEeceeeeecCccccchHHHhhcCCcceeHHHHHHHHHHHHHHHHHhhhheeeccHHHHHHHHhcc-ccCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998866 45789


Q ss_pred             hhhhhhhccCCCChHHHHHHHHHHHHHHhheeeeecccccchHHHHHHHHHHHHHHHhhheeEEEeccCCcchhHHHHHH
Q 004659          405 VHARLMKSYKQVPQWWFYVLLLGSIGLSLLMSFVWKDEVQLQWWGMLFAFALAWIVTLPIGVIQATTNQQPGYDIIAQFM  484 (739)
Q Consensus       405 ~h~~lm~~y~~vP~ww~~~~~v~~~~~~i~~~~~~~~~~~lp~~~~ilal~la~i~~~~~~~~~g~t~~~p~~~~isqli  484 (739)
                      +|.|+||+|||||+|||++++++++++++++|+.|+++.|+|||++++|+++++++++|.|.+.|+||++|++|+++|+|
T Consensus       430 iHtrlMkkYKeVP~WWf~~ili~s~~l~~~~~~~~~~~~q~PwWg~~va~~ia~vf~iPigii~AtTNq~~GLNiitE~i  509 (761)
T KOG2262|consen  430 IHTRLMKKYKEVPDWWFLAILIVSLGLGLAACEGYKTQVQLPWWGLLVACAIAFVFTIPIGIIQATTNQTPGLNIITEYI  509 (761)
T ss_pred             HHHHHHHHhccCcHHHHHHHHHHHHHHHhhheeeecccccCchHHHHHHHHHHHHHhccHHHhhhhccCCccHHHHHHHH
Confidence            99999999999999999999999999999999999877799999999999999999999999999999999999999999


Q ss_pred             HHhhcCCchHHHHHHHHHHHhhHHHHHHHhhhhhhhhhcCCChhhHHHHHHHhhHHhHHHHHHHHHHHHHhhhcccCccC
Q 004659          485 IGYVLPGKPIANLLFKIYGRISTIHALSFLSDLKLGHYMKIPPRCMYTAQLVGTIVSGVVNLGVAWWMLESIENICDVES  564 (739)
Q Consensus       485 ~g~~~pg~~~anl~~~~~~~~~~~qa~~~~~DlK~G~y~~~pPR~~f~~QliGtivg~~v~~~v~~~~~~~~~~~~~~~l  564 (739)
                      .||+.||+|+|||+||.||+.++.||..++||+|+|||||+|||.||.+|++||+++++|+.+|..|++.+++++|+.+ 
T Consensus       510 ~Gy~~PgrPiAn~~FK~yGyism~Qal~f~~DlKlghYMKIPPR~mF~~Q~v~tivs~~Vn~gv~~W~m~~I~~iC~~~-  588 (761)
T KOG2262|consen  510 IGYIYPGRPIANLCFKTYGYISMTQALTFLQDLKLGHYMKIPPRSMFAVQLVGTIVAGFVNLGVAWWLMYSIPNICTTD-  588 (761)
T ss_pred             HHhhcCCchHHHHHHHHhchhhHHHHHHHHhhccceeeecCChHHHHHHHHHHHHhheeeeHHhHHHHHhcccccccCC-
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999998 


Q ss_pred             CCCCCcccccchhHHhhhHhhhhhccCccccCCCCchhHHHHHHHHHHHhHHHHHHHHhhcCCCccccccchhHHhhhcc
Q 004659          565 LHPDSQWTCPKYRVTFDASVIWGLIGPRRLFGPGGMYRNLVWLFLVGAVLPVPVWVLSKVFPEKKWIPLINIPVISYGFA  644 (739)
Q Consensus       565 ~~~~~~~~~p~~~~~~~~sv~wg~~gp~~~f~~g~~y~~~~~~~liG~~~~i~~~ll~r~~p~~~~~~~~~~p~~~~g~~  644 (739)
                        +++.||||..+++|++||+||++||+|+|++++.|+.+.|+|++|+++|+++|+++|++|+++|.+++|+|+++.|.+
T Consensus       589 --~~s~~TCP~~rvffnASvIWGlIGP~riF~~~g~Y~~l~wFFLiGa~~pv~vw~~~k~fPk~~w~~~i~~pvl~gg~~  666 (761)
T KOG2262|consen  589 --QNSPWTCPSDRVFFNASVIWGLIGPKRIFGSLGIYPGLNWFFLIGALAPVLVWLLQKKFPKKKWIKQINPPVLFGGTA  666 (761)
T ss_pred             --CCCCccCCCCceEEeceeeeecccchhhcCCCCccCcchHHHHHHHHhhHHHHHHHHhcchhhhhhccCcceEecccc
Confidence              899999999999999999999999999999999999999999999999999999999999998999999999999999


Q ss_pred             ccCCCCchhchHHHHHHHHHHHHHHhccccccchhhhhhhhhHhhhhHHHHHHHHHHHHcCCCCcccccCCCC-CCCCCC
Q 004659          645 GMPPATPTNIASWLITGMIFNYFVFRYHKRWWQKYNYVLSAALDAGTAFMGVLLFFALQNNDINLKWWGTHVD-HCPLAT  723 (739)
Q Consensus       645 ~~~p~~~~~~~~~~~vG~~~~~~~rr~~~~w~~kyn~vlaagL~aG~ai~gli~~~~~~~~g~~~~wwGn~~~-~~~~~~  723 (739)
                      ++||++..|+++|+++|+++++++|||++.||+||||++|||||+|.++|++++|||++++|.+.+||||+++ +|+..+
T Consensus       667 ~mPpat~vny~sw~iv~fifny~i~r~~~~WW~kYNyvLsaaldaG~a~~~vliffcv~~~~~~~~WWGn~~~~~c~~a~  746 (761)
T KOG2262|consen  667 NMPPATAVNYTSWAIVGFIFNYYIFRYRRSWWQKYNYVLSAALDAGVAFMGVLIFFCVQYPGISLNWWGNTVSAGCDLAG  746 (761)
T ss_pred             cCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhhcccchhHHHhHhhheeccCCCccccccCcCCCCCCccC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999984 899999


Q ss_pred             CCCCCcccccCCCCC
Q 004659          724 CPTAPGIAVEGCPVF  738 (739)
Q Consensus       724 ~~~~~~~~~~~~~~~  738 (739)
                      |+.+++..+++||.|
T Consensus       747 cp~~~~v~~~~~~~f  761 (761)
T KOG2262|consen  747 CPTAKGVVVSGCPVF  761 (761)
T ss_pred             CCcCCeeecCCCCCC
Confidence            999999999999876

>TIGR00727 ISP4_OPT small oligopeptide transporter, OPT family Back     alignment and domain information
>TIGR00728 OPT_sfam oligopeptide transporters, OPT superfamily Back     alignment and domain information
>PF03169 OPT: OPT oligopeptide transporter protein; InterPro: IPR004813 The transporter OPT family are transporters of small oligopeptides, demonstrated experimentally in three different species of yeast Back     alignment and domain information
>TIGR00733 putative oligopeptide transporter, OPT family Back     alignment and domain information
>COG1297 Predicted membrane protein [Function unknown] Back     alignment and domain information
>PF03169 OPT: OPT oligopeptide transporter protein; InterPro: IPR004813 The transporter OPT family are transporters of small oligopeptides, demonstrated experimentally in three different species of yeast Back     alignment and domain information
>TIGR00733 putative oligopeptide transporter, OPT family Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00