Citrus Sinensis ID: 004688

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------

MESPLPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI

cccccccccEEccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEcccccccccccccccccccEEEEEccccccccHHHHHHHHHHHHccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEcccccccHHHHHcccccccEEEEEEcccccccccccccccccEEEEEccccccccEEEEccccccccccHHHHHHcccccccccccccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHcccEEEEEccccccccccccccHHHHHHHHHHHHcHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHcccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHEEcc

ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHccccccccccEEEEEcccccccccEEEHHHHHHHHHccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEcccccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHccccccccEEEEEccccccccccccccccccEEEEEEEccccccccccEEEccccHEEHEEEcccccccccccccccccccccccHcccccHHHHcccccccccHHHHHHHHHHHHcccccccccccccEEEEEcccccEEEcccHEcccccEEEEEccccccccccccccHHHHHHHHHHHHcccEEEEEcccccEEEccccccHHHHHHHHHHccccHHcHHHHHHHHHHHHHHHccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccEEEEcHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccHHHHHHHHEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHc

mesplplhvchvNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRaylwrpvsrtvfperlpeddklpaidvfictadpekeptfgVMNTVLSAMaldypvdklhvylsddggspitLRGMREAFRFAKWwipfcrryrikticpqayfseaesdenfgdsefvtEKRKIKEKYEMFEEQVMKAVedgeygnsrnhSTIIEQIIQdtsgenetiRQADLVEMPLLVYvsrekspehlhhfkGGALNVLLRVSgvisnspyilgldcdmycndptsarqamcfhldpktssslafvqfpqkfhnfnehdiydgslrsgyrlqwpgmdglkgpfltgtghyirreslygnfkhkgidlaelkdtfgesNLFIKSLHQSYehknvngenlSNVLQQETEVLASCSYEhqtkwgeevgFSYQSVSEDFFTGFILHckgwtstyldpsrpqflgtsttnLNDVLIQGTRWASGLIDVSisrfcpllygpsrMSLLLSMCygemslfpllyclplwcfatlpqlcllngiplypevsspffmVFSFIFLSAICKHLQEVIStggsvytwrnEQRIWMIKSVTSHFYGSMDAIMKLLGLrkasflptnkvldneqvkryemgqfdfqtssvFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIvrkdkgrispsaiLLSSVFFVTFLFFGSIILI

MESPLPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFperlpeddklPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFseaesdenfgdsefVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI

*****PLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS***********************************************TIIEQIIQ*******TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIIL*

****LPL*VCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSY*********LSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLP*************EMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI

****LPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI

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MESPLPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEAESDENFGDSEFVTExxxxxxxxxxxxxxxxxxxxxGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		737	2.2.26 [Sep-21-2011]
Q651X6		728	Cellulose synthase-like p	yes	no	0.928	0.939	0.380	1e-137
Q651X7		737	Cellulose synthase-like p	yes	no	0.926	0.926	0.367	1e-136
Q8VYR4		722	Cellulose synthase-like p	yes	no	0.940	0.959	0.360	1e-131
Q0WVN5		751	Cellulose synthase-like p	no	no	0.943	0.925	0.355	1e-129
Q570S7		760	Cellulose synthase-like p	no	no	0.919	0.892	0.360	1e-129
Q0DXZ1		745	Cellulose synthase-like p	no	no	0.910	0.900	0.356	1e-128
Q8VZK9		729	Cellulose synthase-like p	no	no	0.888	0.898	0.346	1e-122
Q8LPK5		985	Cellulose synthase A cata	no	no	0.922	0.690	0.326	1e-114
Q69P51		1055	Cellulose synthase A cata	no	no	0.949	0.663	0.314	1e-111
A2Z1C8		1055	Cellulose synthase A cata	N/A	no	0.949	0.663	0.314	1e-111

>sp\|Q651X6\|CSLE6_ORYSJ Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1	Back alignment and function desciption

 Score =  490 bits (1262), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 280/736 (38%), Positives = 410/736 (55%), Gaps = 52/736 (7%)

Query: 21  KLHAFLHCIAIALLIYYRASYL--LQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRP 78
           +L A      I L++YYRA+ +    E RA     WL + A+EL  +  W++ ++  W P
Sbjct: 24  RLQAATVAAGILLVLYYRATRVPAAGEGRA----AWLGMAAAELWFAVYWVITQSVRWCP 79

Query: 79  VSRTVFPERLPE--DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLS 136
           V R  F  RL E   + LP +DVF+CTADP  EP   V++T+LS MA +YP +K+ VYLS
Sbjct: 80  VRRRTFKNRLAERYKENLPGVDVFVCTADPHAEPPSLVISTILSVMAYNYPSEKISVYLS 139

Query: 137 DDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEAESDENFGDSEFVTEKRK 196
           DDGGS +T   + EA  FAK W+PFCRRY I+   P AYFSE+E   N    +   E   
Sbjct: 140 DDGGSILTFYALWEASMFAKKWLPFCRRYNIEPRSPAAYFSESEGHHNLCSPK---EWSF 196

Query: 197 IKEKYEMFEEQVMKAVEDGEYG-----------------NSRNHSTIIEQIIQDTSGENE 239
           IK  YE   E++  AV  G+                    S+NH  I++ +I    G+++
Sbjct: 197 IKNLYEEMRERIDSAVMSGKIPEEIKLKHKGFDEWNSEMTSKNHQPIVQVLID---GKSQ 253

Query: 240 TIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCND 299
                D   +P LVY++REKSP++ H+FK GALN L+RVS +IS+SP IL +DCDMY N+
Sbjct: 254 NAVDDDGNVLPTLVYMAREKSPQYHHNFKAGALNALIRVSALISDSPVILNVDCDMYSNN 313

Query: 300 PTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPF 359
             S R A+CF LD + S  + FVQ+PQ ++N  +++IY  SL     ++  G+D   G  
Sbjct: 314 SDSIRDALCFFLDEEMSHKIGFVQYPQNYNNMTKNNIYGNSLNVINHVEMRGLDSAGGCL 373

Query: 360 LTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQ 419
             GTG + RRE L G    K     + K+ +G          +   H+N++       ++
Sbjct: 374 YIGTGCFHRREILCGKKFSK-----DYKEDWGRG-------IKERGHENIDE------IE 415

Query: 420 QETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTST 479
           ++ + LA+C+YE +T+WG E+G  Y    ED  TG  +HC+GW S Y++P R  F+G + 
Sbjct: 416 EKAKSLATCTYELRTQWGNEIGVKYGCPVEDVITGLAIHCRGWESVYMEPQRAAFVGVAP 475

Query: 480 TNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCF 539
             L   ++Q  RW+ G   + +S+    L+G  ++SL L M Y    L+     LP   +
Sbjct: 476 ATLAQTILQHKRWSEGNFTIFLSKHNTFLFGHGKISLQLQMGYCIYGLWA-ANSLPTIYY 534

Query: 540 ATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMI 599
             +P L L+ G PL+PE+ SP+   F ++F       L E + +G ++  W N QR+WM+
Sbjct: 535 VMIPALGLVKGTPLFPEIMSPWATPFIYVFCVKTLYSLYEALLSGDTLKGWWNGQRMWMV 594

Query: 600 KSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSL 659
           K +TS+ YG +D I KLLGL K SF  T KV D ++ KRYE    +F +SS   V + ++
Sbjct: 595 KRITSYLYGFIDTIRKLLGLSKMSFEITAKVSDGDEAKRYEQEILEFGSSSPEFVIIATV 654

Query: 660 MILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAIL 719
            +LN   LV G+ +++A G W+    QV+L   I+I N  I E M VRKDKGRI P  + 
Sbjct: 655 ALLNFVCLVAGLSKIMA-GVWNVFLPQVILCGLIVITNIPIYEAMFVRKDKGRI-PLPVT 712

Query: 720 LSSVFFVTFLFFGSII 735
           L+S+ FV   F   I+
Sbjct: 713 LASIGFVMLAFLLPIV 728

Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp\|Q651X7\|CSLE1_ORYSJ Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2	Back alignment and function description

>sp\|Q8VYR4\|CSLG2_ARATH Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1	Back alignment and function description

>sp\|Q0WVN5\|CSLG3_ARATH Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2	Back alignment and function description

>sp\|Q570S7\|CSLG1_ARATH Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1	Back alignment and function description

>sp\|Q0DXZ1\|CSLE2_ORYSJ Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1	Back alignment and function description

>sp\|Q8VZK9\|CSLE1_ARATH Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1	Back alignment and function description

>sp\|Q8LPK5\|CESA8_ARATH Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1	Back alignment and function description

>sp\|Q69P51\|CESA9_ORYSJ Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1	Back alignment and function description

>sp\|A2Z1C8\|CESA9_ORYSI Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		737
224111028		857	predicted protein [Populus trichocarpa]	0.997	0.857	0.594	0.0
359477703		733	PREDICTED: cellulose synthase-like prote	0.982	0.987	0.606	0.0
297737188		822	unnamed protein product [Vitis vinifera]	0.987	0.885	0.591	0.0
255576870		762	cellulose synthase, putative [Ricinus co	0.956	0.925	0.612	0.0
356548660		736	PREDICTED: cellulose synthase-like prote	0.970	0.971	0.608	0.0
356535446		740	PREDICTED: cellulose synthase-like prote	0.974	0.970	0.585	0.0
429326514		723	cellulose synthase-like protein [Populus	0.966	0.984	0.593	0.0
224111026		723	predicted protein [Populus trichocarpa]	0.967	0.986	0.587	0.0
359477392		678	PREDICTED: cellulose synthase-like prote	0.910	0.989	0.565	0.0
255576868		711	cellulose synthase, putative [Ricinus co	0.947	0.981	0.562	0.0

>gi\|224111028\|ref\|XP_002315722.1\| predicted protein [Populus trichocarpa] gi\|222864762\|gb\|EEF01893.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  949 bits (2454), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/813 (59%), Positives = 597/813 (73%), Gaps = 78/813 (9%)

Query: 1   MESPLPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIP---WLLV 57
           ME   PLH+CHV+  S+ +N+LH  LH IAIA LIYYRAS+L QE +  + +P   WLLV
Sbjct: 46  MEISPPLHLCHVSKTSIFINRLHGLLHSIAIAFLIYYRASFLFQEPQTKATVPMLLWLLV 105

Query: 58  FASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNT 117
           F +ELLLSFIWL+G+AY W PVSRTVFPERLPEDDKLPAIDVFICT DP+KEPT  VMNT
Sbjct: 106 FVAELLLSFIWLIGQAYHWHPVSRTVFPERLPEDDKLPAIDVFICTVDPDKEPTLDVMNT 165

Query: 118 VLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS 177
           VLSAMALDYP +KL++YLSDDGG+ +TL GM+EA+RFAK W+PFC++Y IKT CP+AYFS
Sbjct: 166 VLSAMALDYPAEKLNLYLSDDGGAAVTLHGMKEAWRFAKSWLPFCKKYGIKTRCPKAYFS 225

Query: 178 E-AESDENFGDS-EFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNS------RNHSTIIEQ 229
             ++ D++FG S EF+ +++ I+EKYE F+E+VM+  ED     +      R+H  +IE 
Sbjct: 226 ATSKDDDSFGSSNEFMADRQIIQEKYEDFKERVMRFREDFVLEETKSDITGRDHPALIEA 285

Query: 230 -------------------------------IIQDTSGENETIRQADLVEMPLLVYVSRE 258
                                          +IQD S E     +A+  EMPLLVYVSRE
Sbjct: 286 FLKKKELSPNWSLVIGKGKGGLTDAEHEADTVIQDNSNEEAPKDEAN--EMPLLVYVSRE 343

Query: 259 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSS 318
           K P H HHFK GALNVLLRVSGVISNSP+IL LDCDMYCNDPTSARQAMCF  DP  SSS
Sbjct: 344 KRPSHPHHFKAGALNVLLRVSGVISNSPHILVLDCDMYCNDPTSARQAMCFFFDPNISSS 403

Query: 319 LAFVQFPQKFHNFNEHDIYDGSLRSGY-------------RLQWPGMDGLKGPFLTGTGH 365
           LAFVQFPQ+FHN ++HDIYD  LRS +             ++ W G+DGLKGP L+GTG 
Sbjct: 404 LAFVQFPQRFHNISKHDIYDSQLRSTFGVRLVFIDFTLLNQILWQGLDGLKGPVLSGTGF 463

Query: 366 YIRRESLYGNFKHKGI---------------------DLAELKDTFGESNLFIKSLHQSY 404
           YI+R SLYG+   KG+                     +L EL+DTFG SN F+ S+ Q+Y
Sbjct: 464 YIKRNSLYGDSMQKGLVLSNPNHAASSQHALDDPKSCNLLELRDTFGLSNEFVNSIRQNY 523

Query: 405 EHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTS 464
           +   ++  ++S++L QET +LASC Y   TKWGEE  F Y SV+EDFFTGFILHCKGW S
Sbjct: 524 KANPMSYGSVSSMLLQETRILASCDYPRHTKWGEEACFLYHSVAEDFFTGFILHCKGWLS 583

Query: 465 TYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGE 524
            YL+PSRPQFLGTS T+LND+LIQGTRW+SGL++V +SRFCPL+YG  RMS L S+CY E
Sbjct: 584 VYLNPSRPQFLGTSITSLNDLLIQGTRWSSGLVEVGLSRFCPLIYGTLRMSFLESLCYAE 643

Query: 525 MSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTG 584
           +SLFPL YCLPLWCFAT+PQLCLLNGIPLYP+VSS FF+VFSFIFLSA+ KHL EV+ +G
Sbjct: 644 ISLFPLFYCLPLWCFATIPQLCLLNGIPLYPKVSSSFFIVFSFIFLSAVSKHLYEVLKSG 703

Query: 585 GSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQF 644
           GS+ T   EQR+WM+KSV++H YGS+DA+MK +G+R+ASFLPTNK  D E+ K Y+MG+F
Sbjct: 704 GSINTLVYEQRLWMMKSVSTHTYGSLDAVMKRIGVREASFLPTNKAADEEKFKLYQMGKF 763

Query: 645 DFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGM 704
           DF+TSS+ LVPMV+++ILN+A+ V GVIR+I  GNWD +  QV LS YIL++N AI+EGM
Sbjct: 764 DFKTSSMLLVPMVTVIILNMASFVLGVIRIIIAGNWDSMVVQVFLSSYILVMNSAIIEGM 823

Query: 705 IVRKDKGRISPSAILLSSVFFVTFLFFGSIILI 737
            +RKDKG I  S I+LS+VF + FL  GS  L+
Sbjct: 824 TIRKDKGCIPLSVIVLSTVFSIIFLCLGSFFLM 856

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359477703\|ref\|XP_002280696.2\| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|297737188\|emb\|CBI26389.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255576870\|ref\|XP_002529321.1\| cellulose synthase, putative [Ricinus communis] gi\|223531245\|gb\|EEF33090.1\| cellulose synthase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|356548660\|ref\|XP_003542718.1\| PREDICTED: cellulose synthase-like protein G2-like [Glycine max]	Back alignment and taxonomy information

>gi\|356535446\|ref\|XP_003536256.1\| PREDICTED: cellulose synthase-like protein G2-like [Glycine max]	Back alignment and taxonomy information

>gi\|429326514\|gb\|AFZ78597.1\| cellulose synthase-like protein [Populus tomentosa]	Back alignment and taxonomy information

>gi\|224111026\|ref\|XP_002315721.1\| predicted protein [Populus trichocarpa] gi\|222864761\|gb\|EEF01892.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|359477392\|ref\|XP_002280640.2\| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255576868\|ref\|XP_002529320.1\| cellulose synthase, putative [Ricinus communis] gi\|223531244\|gb\|EEF33089.1\| cellulose synthase, putative [Ricinus communis]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		737
TAIR\|locus:2124167		985	IRX1 "IRREGULAR XYLEM 1" [Arab	0.462	0.346	0.381	7.6e-105
TAIR\|locus:2178935		1026	IRX3 "IRREGULAR XYLEM 3" [Arab	0.393	0.282	0.384	2e-101
TAIR\|locus:2176090		1084	CESA6 "cellulose synthase 6" [	0.462	0.314	0.387	2.4e-101
TAIR\|locus:2136308		1084	CESA2 "cellulose synthase A2"	0.374	0.254	0.406	4.8e-101
TAIR\|locus:2052576		1088	CESA9 "cellulose synthase A9"	0.484	0.328	0.358	8.2e-101
TAIR\|locus:2178193		1069	CESA5 "cellulose synthase 5" [	0.462	0.318	0.376	1.7e-100
TAIR\|locus:2172457		1049	CESA4 "cellulose synthase A4"	0.385	0.270	0.388	2.3e-99
TAIR\|locus:2156789		1065	CEV1 "CONSTITUTIVE EXPRESSION	0.461	0.319	0.359	3.4e-99
TAIR\|locus:2040080		1065	CESA10 "cellulose synthase 10"	0.495	0.342	0.355	1.8e-98
TAIR\|locus:2127776		1081	CESA1 "cellulose synthase 1" [	0.462	0.315	0.360	5.8e-97

TAIR\|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 570 (205.7 bits), Expect = 7.6e-105, Sum P(2) = 7.6e-105
 Identities = 142/372 (38%), Positives = 205/372 (55%)

Query:    26 LHCIAIALLIYYRASYLLQETRAI---SIIPWLLVFASELLLSFI-WL-LGR-AYLWRPV 79
             +  I +AL   YR ++ +     +   S+I  +    S +L  F  W  + R  Y+ R  
Sbjct:   189 MRLIILALFFNYRITHPVDSAYGLWLTSVICEIWFAVSWVLDQFPKWSPINRETYIDRLS 248

Query:    80 SRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDG 139
             +R  F ER  E  +L A+D F+ T DP KEP     NTVLS +ALDYPVDK+  Y+SDDG
Sbjct:   249 AR--F-EREGEQSQLAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCYVSDDG 305

Query:   140 GSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS-EAESDENFGDSEFVTEKRKIK 198
              + ++   + E   FA+ W+PFC++Y I+   P+ YFS + +   +     FV E+R +K
Sbjct:   306 AAMLSFESLVETADFARKWVPFCKKYSIEPRAPEFYFSLKIDYLRDKVQPSFVKERRAMK 365

Query:   199 EKYEMFEEQ----VMKAVEDGEYG------------NSRNHSTIIEQIIQDTSGENETIR 242
               YE F+ +    V KA +  E G            N+R+H  +I Q+    SG     R
Sbjct:   366 RDYEEFKIRMNALVAKAQKTPEEGWTMQDGTSWPGNNTRDHPGMI-QVFLGYSGA----R 420

Query:   243 QADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTS 302
               +  E+P LVYVSREK P + HH K GA N L+RVS V++N+P+IL LDCD Y N+  +
Sbjct:   421 DIEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPFILNLDCDHYVNNSKA 480

Query:   303 ARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTG 362
              R+AMCF +DP     + FVQFPQ+F   ++ D Y       + +   G+DG++GP   G
Sbjct:   481 VREAMCFLMDPVVGQDVCFVQFPQRFDGIDKSDRYANRNIVFFDVNMRGLDGIQGPVYVG 540

Query:   363 TGHYIRRESLYG 374
             TG   RR++LYG
Sbjct:   541 TGTVFRRQALYG 552

GO:0005886 "plasma membrane" evidence=ISM;TAS

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016759 "cellulose synthase activity" evidence=ISS;IMP

GO:0016760 "cellulose synthase (UDP-forming) activity" evidence=IEA

GO:0030244 "cellulose biosynthetic process" evidence=IEA;IMP

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0005618 "cell wall" evidence=IDA

GO:0006970 "response to osmotic stress" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0009863 "salicylic acid mediated signaling pathway" evidence=IGI

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=IGI

GO:0009873 "ethylene mediated signaling pathway" evidence=IGI

GO:0010116 "positive regulation of abscisic acid biosynthetic process" evidence=IGI

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0050832 "defense response to fungus" evidence=IMP

GO:0052386 "cell wall thickening" evidence=IMP

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR\|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2176090 CESA6 "cellulose synthase 6" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2136308 CESA2 "cellulose synthase A2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2052576 CESA9 "cellulose synthase A9" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2127776 CESA1 "cellulose synthase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8VYR4	CSLG2_ARATH	2, ., 4, ., 1, ., -	0.3608	0.9402	0.9598	yes	no
Q651X7	CSLE1_ORYSJ	2, ., 4, ., 1, ., -	0.3670	0.9267	0.9267	yes	no
Q651X6	CSLE6_ORYSJ	2, ., 4, ., 1, ., -	0.3804	0.9280	0.9395	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.691
4th Layer	2.4.1.12	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_X0687	hypothetical protein (857 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		737
PLN02893		734	PLN02893, PLN02893, Cellulose synthase-like protei	0.0
PLN02189		1040	PLN02189, PLN02189, cellulose synthase	1e-133
PLN02190		756	PLN02190, PLN02190, cellulose synthase-like protei	1e-123
PLN02436		1094	PLN02436, PLN02436, cellulose synthase A	5e-76
pfam03552		716	pfam03552, Cellulose_synt, Cellulose synthase	3e-75
PLN02915		1044	PLN02915, PLN02915, cellulose synthase A [UDP-form	4e-74
PLN02195		977	PLN02195, PLN02195, cellulose synthase A	6e-74
PLN02638		1079	PLN02638, PLN02638, cellulose synthase A (UDP-form	5e-73
PLN02400		1085	PLN02400, PLN02400, cellulose synthase	4e-71
PLN02248		1135	PLN02248, PLN02248, cellulose synthase-like protei	9e-61
pfam03552		716	pfam03552, Cellulose_synt, Cellulose synthase	4e-53
PLN02915		1044	PLN02915, PLN02915, cellulose synthase A [UDP-form	6e-53
PLN02195		977	PLN02195, PLN02195, cellulose synthase A	9e-52
PLN02436		1094	PLN02436, PLN02436, cellulose synthase A	4e-49
PLN02638		1079	PLN02638, PLN02638, cellulose synthase A (UDP-form	9e-49
PLN02400		1085	PLN02400, PLN02400, cellulose synthase	8e-48
PLN02248		1135	PLN02248, PLN02248, cellulose synthase-like protei	9e-34
TIGR03030		713	TIGR03030, CelA, cellulose synthase catalytic subu	2e-12
cd06421		234	cd06421, CESA_CelA_like, CESA_CelA_like are involv	2e-10
cd06421		234	cd06421, CESA_CelA_like, CESA_CelA_like are involv	7e-10
PRK11498		852	PRK11498, bcsA, cellulose synthase catalytic subun	4e-09
cd06421		234	cd06421, CESA_CelA_like, CESA_CelA_like are involv	2e-08
TIGR03030		713	TIGR03030, CelA, cellulose synthase catalytic subu	4e-07
COG1215		439	COG1215, COG1215, Glycosyltransferases, probably i	1e-05
PRK11498		852	PRK11498, bcsA, cellulose synthase catalytic subun	2e-04
pfam13632		194	pfam13632, Glyco_trans_2_3, Glycosyl transferase f	0.004

>gnl\|CDD\|215483 PLN02893, PLN02893, Cellulose synthase-like protein	Back alignment and domain information

 Score =  623 bits (1609), Expect = 0.0
 Identities = 291/762 (38%), Positives = 436/762 (57%), Gaps = 72/762 (9%)

Query: 6   PLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLS 65
           PLH CH      I N++ A ++  AI  L+Y+    LL  T   + +  LL+  ++++L+
Sbjct: 13  PLHTCHPMR-RTIANRVFAVVYSCAILALLYHHVIALLHST---TTLITLLLLLADIVLA 68

Query: 66  FIWLLGRAYLWRPVSRTVFPERL----PEDDKLPAIDVFICTADPEKEPTFGVMNTVLSA 121
           F+W   +A+   PV R VF E L     E D  P +DVFICTADP KEP  GV+NT LS 
Sbjct: 69  FMWATTQAFRMCPVHRRVFIEHLEHYAKESD-YPGLDVFICTADPYKEPPMGVVNTALSV 127

Query: 122 MALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEAES 181
           MA DYP +KL VY+SDDGGS +TL    EA +FA  W+PFC++ +I   CP+AYFS    
Sbjct: 128 MAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHWLPFCKKNKIVERCPEAYFSSNSH 187

Query: 182 DENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNS--------------------R 221
                   +  E  +IK  YE  + +V   VE G+                        +
Sbjct: 188 -------SWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQ 240

Query: 222 NHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGV 281
           +H T+I Q++ + SG+++ I       MP L+YVSREKS    HHFK GALN LLRVS  
Sbjct: 241 DHPTVI-QVLLE-SGKDKDITGHT---MPNLIYVSREKSKNSPHHFKAGALNTLLRVSAT 295

Query: 282 ISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSL 341
           ++N+P IL LDCDMY NDP +  +A+C+ LDP     L +VQFPQ FH  N++DIY G L
Sbjct: 296 MTNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGEL 355

Query: 342 RSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLH 401
           +  +++   GMDGL GP   GTG + RR   YG                G S+L      
Sbjct: 356 KRLFQINMIGMDGLAGPNYVGTGCFFRRRVFYG----------------GPSSLI----- 394

Query: 402 QSYEHKNVNGENLSNVLQQETEVLAS------CSYEHQTKWGEEVGFSYQSVSEDFFTGF 455
              E   +N ++L +   +  EVLA       C+YE+QT WG ++GF Y S+ ED++TG+
Sbjct: 395 -LPEIPELNPDHLVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGY 453

Query: 456 ILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMS 515
            L C+GW S + +P RP FLG S  NL+DVL Q  RW+ GL++V+ S++ P+ +G   + 
Sbjct: 454 RLQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIG 513

Query: 516 LLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICK 575
           LL+ + Y   + +P ++ +P+  +A LPQL LLNG+ ++P+ S P+F ++ F+FL A  +
Sbjct: 514 LLMGLGYAHYAFWP-IWSIPITIYAFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQ 572

Query: 576 HLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQ 635
            L + + +GG++  W N+QR+WMI+ ++S  +G ++ ++K LG+    F  T+KV+D EQ
Sbjct: 573 DLLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVTSKVVDEEQ 632

Query: 636 VKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILI 695
            KRYE G F+F  SS   +P+ +  I+N+ + + G+ ++    N + LF Q+ L+ + ++
Sbjct: 633 SKRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQRNLEGLFLQMFLAGFAVV 692

Query: 696 INFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFF-GSIIL 736
             + I E M++R D G++ P  I L S+     L+   S   
Sbjct: 693 NCWPIYEAMVLRTDDGKL-PVKITLISIVLAWALYLASSFAF 733

Length = 734

>gnl\|CDD\|215121 PLN02189, PLN02189, cellulose synthase	Back alignment and domain information

>gnl\|CDD\|215122 PLN02190, PLN02190, cellulose synthase-like protein	Back alignment and domain information

>gnl\|CDD\|215239 PLN02436, PLN02436, cellulose synthase A	Back alignment and domain information

>gnl\|CDD\|217611 pfam03552, Cellulose_synt, Cellulose synthase	Back alignment and domain information

>gnl\|CDD\|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit	Back alignment and domain information

>gnl\|CDD\|215124 PLN02195, PLN02195, cellulose synthase A	Back alignment and domain information

>gnl\|CDD\|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit	Back alignment and domain information

>gnl\|CDD\|215224 PLN02400, PLN02400, cellulose synthase	Back alignment and domain information

>gnl\|CDD\|215138 PLN02248, PLN02248, cellulose synthase-like protein	Back alignment and domain information

>gnl\|CDD\|217611 pfam03552, Cellulose_synt, Cellulose synthase	Back alignment and domain information

>gnl\|CDD\|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit	Back alignment and domain information

>gnl\|CDD\|215124 PLN02195, PLN02195, cellulose synthase A	Back alignment and domain information

>gnl\|CDD\|215239 PLN02436, PLN02436, cellulose synthase A	Back alignment and domain information

>gnl\|CDD\|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit	Back alignment and domain information

>gnl\|CDD\|215224 PLN02400, PLN02400, cellulose synthase	Back alignment and domain information

>gnl\|CDD\|215138 PLN02248, PLN02248, cellulose synthase-like protein	Back alignment and domain information

>gnl\|CDD\|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming)	Back alignment and domain information

>gnl\|CDD\|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>gnl\|CDD\|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>gnl\|CDD\|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional	Back alignment and domain information

>gnl\|CDD\|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>gnl\|CDD\|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming)	Back alignment and domain information

>gnl\|CDD\|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>gnl\|CDD\|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional	Back alignment and domain information

>gnl\|CDD\|222273 pfam13632, Glyco_trans_2_3, Glycosyl transferase family group 2	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		737
PLN02638		1079	cellulose synthase A (UDP-forming), catalytic subu	100.0
PLN02195		977	cellulose synthase A	100.0
PLN02436		1094	cellulose synthase A	100.0
PLN02400		1085	cellulose synthase	100.0
PLN02189		1040	cellulose synthase	100.0
PLN02190		756	cellulose synthase-like protein	100.0
PLN02893		734	Cellulose synthase-like protein	100.0
PLN02248		1135	cellulose synthase-like protein	100.0
PLN02915		1044	cellulose synthase A [UDP-forming], catalytic subu	100.0
PF03552		720	Cellulose_synt: Cellulose synthase; InterPro: IPR0	100.0
PRK11498		852	bcsA cellulose synthase catalytic subunit; Provisi	100.0
TIGR03030		713	CelA cellulose synthase catalytic subunit (UDP-for	100.0
PRK05454		691	glucosyltransferase MdoH; Provisional	100.0
PRK14583		444	hmsR N-glycosyltransferase; Provisional	100.0
cd04191		254	Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon	100.0
COG1215		439	Glycosyltransferases, probably involved in cell wa	100.0
PRK11204		420	N-glycosyltransferase; Provisional	100.0
TIGR03111		439	glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0	100.0
PRK14716		504	bacteriophage N4 adsorption protein B; Provisional	100.0
cd06437		232	CESA_CaSu_A2 Cellulose synthase catalytic subunit	99.97
cd06421		234	CESA_CelA_like CESA_CelA_like are involved in the	99.97
PRK11234		727	nfrB bacteriophage N4 adsorption protein B; Provis	99.97
cd06427		241	CESA_like_2 CESA_like_2 is a member of the cellulo	99.96
cd06435		236	CESA_NdvC_like NdvC_like proteins in this family a	99.96
PF13641		228	Glyco_tranf_2_3: Glycosyltransferase like family 2	99.95
TIGR03472		373	HpnI hopanoid biosynthesis associated glycosyl tra	99.95
cd04190		244	Chitin_synth_C C-terminal domain of Chitin Synthas	99.94
cd02520		196	Glucosylceramide_synthase Glucosylceramide synthas	99.93
PRK15489		703	nfrB bacteriophage N4 adsorption protein B; Provis	99.93
cd04192		229	GT_2_like_e Subfamily of Glycosyltransferase Famil	99.92
cd06439		251	CESA_like_1 CESA_like_1 is a member of the cellulo	99.92
cd06434		235	GT2_HAS Hyaluronan synthases catalyze polymerizati	99.92
TIGR03469		384	HonB hopene-associated glycosyltransferase HpnB. T	99.91
COG2943		736	MdoH Membrane glycosyltransferase [Cell envelope b	99.91
cd02525		249	Succinoglycan_BP_ExoA ExoA is involved in the bios	99.86
cd06438		183	EpsO_like EpsO protein participates in the methano	99.81
cd06436		191	GlcNAc-1-P_transferase N-acetyl-glucosamine transf	99.8
PF13632		193	Glyco_trans_2_3: Glycosyl transferase family group	99.75
cd04184		202	GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot	99.74
cd04195		201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	99.71
cd02510		299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	99.67
cd06433		202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	99.66
PLN02726		243	dolichyl-phosphate beta-D-mannosyltransferase	99.65
cd04196		214	GT_2_like_d Subfamily of Glycosyltransferase Famil	99.64
cd02522		221	GT_2_like_a GT_2_like_a represents a glycosyltrans	99.6
cd06442		224	DPM1_like DPM1_like represents putative enzymes si	99.6
cd06913		219	beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran	99.6
cd06420		182	GT2_Chondriotin_Pol_N N-terminal domain of Chondro	99.59
cd04186		166	GT_2_like_c Subfamily of Glycosyltransferase Famil	99.58
PRK10073		328	putative glycosyl transferase; Provisional	99.58
PF13506		175	Glyco_transf_21: Glycosyl transferase family 21	99.55
cd04185		202	GT_2_like_b Subfamily of Glycosyltransferase Famil	99.54
cd06423		180	CESA_like CESA_like is the cellulose synthase supe	99.52
cd04188		211	DPG_synthase DPG_synthase is involved in protein N	99.51
PRK10018		279	putative glycosyl transferase; Provisional	99.5
cd02526		237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	99.5
PRK10063		248	putative glycosyl transferase; Provisional	99.49
PF00535		169	Glycos_transf_2: Glycosyl transferase family 2; In	99.46
PTZ00260		333	dolichyl-phosphate beta-glucosyltransferase; Provi	99.43
PF03142		527	Chitin_synth_2: Chitin synthase; InterPro: IPR0048	99.42
cd04179		185	DPM_DPG-synthase_like DPM_DPG-synthase_like is a m	99.41
TIGR01556		281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	99.28
cd04187		181	DPM1_like_bac Bacterial DPM1_like enzymes are rela	99.26
PRK13915		306	putative glucosyl-3-phosphoglycerate synthase; Pro	99.2
PRK10714		325	undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi	99.2
PF10111		281	Glyco_tranf_2_2: Glycosyltransferase like family 2	99.18
cd00761		156	Glyco_tranf_GTA_type Glycosyltransferase family A	99.15
KOG2571		862	consensus Chitin synthase/hyaluronan synthase (gly	99.1
COG1216		305	Predicted glycosyltransferases [General function p	99.09
COG0463		291	WcaA Glycosyltransferases involved in cell wall bi	98.85
cd02511		229	Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4	98.8
KOG2547		431	consensus Ceramide glucosyltransferase [Lipid tran	98.73
KOG2978		238	consensus Dolichol-phosphate mannosyltransferase [	98.22
KOG2977		323	consensus Glycosyltransferase [General function pr	97.96
cd02514		334	GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es	97.73
KOG3737		603	consensus Predicted polypeptide N-acetylgalactosam	95.91
PF02364		817	Glucan_synthase: 1,3-beta-glucan synthase componen	95.81
PF13704		97	Glyco_tranf_2_4: Glycosyl transferase family 2	95.22
KOG3738		559	consensus Predicted polypeptide N-acetylgalactosam	95.15
KOG3736		578	consensus Polypeptide N-acetylgalactosaminyltransf	94.61
PF13712		217	Glyco_tranf_2_5: Glycosyltransferase like family;	93.53
TIGR02460		381	osmo_MPGsynth mannosyl-3-phosphoglycerate synthase	86.49
COG4092		346	Predicted glycosyltransferase involved in capsule	86.42
PF03452		269	Anp1: Anp1; InterPro: IPR005109 The members of thi	86.35
KOG0916		1679	consensus 1,3-beta-glucan synthase/callose synthas	85.35
PF03071		434	GNT-I: GNT-I family; InterPro: IPR004139 The biosy	84.91
PRK14503		393	mannosyl-3-phosphoglycerate synthase; Provisional	83.85
PF09488		381	Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthas	81.55

>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit	Back alignment and domain information

Probab=100.00  E-value=6.4e-172  Score=1490.71  Aligned_cols=711  Identities=33%  Similarity=0.647  Sum_probs=655.1

Q ss_pred             CCCCceeeeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheeccc
Q 004688            3 SPLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSR   81 (737)
Q Consensus         3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r   81 (737)
                      ..+|||++++.+++. .+||+++++++++++++++||+++..    .++.|+|+++++||+||+|+|+|.|+.||+|++|
T Consensus       253 ~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv~R  328 (1079)
T PLN02638        253 ARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPV----RNAYALWLISVICEIWFALSWILDQFPKWLPVNR  328 (1079)
T ss_pred             CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccC----CccHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence            478899999988873 67999999999999999999999843    3568999999999999999999999999999999


Q ss_pred             cCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHh
Q 004688           82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRF  154 (737)
Q Consensus        82 ~~~~~~l~~-------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~  154 (737)
                      .+++++|.+       ++++|.||||||||||++|||.+++|||+|+|++|||.|||.|||+|||++.+|+++|.||++|
T Consensus       329 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F  408 (1079)
T PLN02638        329 ETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEF  408 (1079)
T ss_pred             ccCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence            999998864       2469999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC---------C
Q 004688          155 AKWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVE-------DGE---------Y  217 (737)
Q Consensus       155 a~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~-------~~~---------~  217 (737)
                      ||+||||||||+|||||||+||+.+ ++.+++.+++|++||++||++|||||+|||.+.+       +|+         +
T Consensus       409 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g  488 (1079)
T PLN02638        409 ARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPG  488 (1079)
T ss_pred             HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCC
Confidence            9999999999999999999999988 5567788899999999999999999999998752       122         4


Q ss_pred             CCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCC
Q 004688          218 GNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYC  297 (737)
Q Consensus       218 ~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~  297 (737)
                      .+++|||+|+|+++.++++.     |.++.++|+|+||+|||||+++||+||||||+++|+|++|||||||+++||||++
T Consensus       489 ~~~~dHp~IiqVll~~~~~~-----d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYi  563 (1079)
T PLN02638        489 NNTRDHPGMIQVFLGHSGGL-----DTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYI  563 (1079)
T ss_pred             CCCCCCHHHHHHHhcCCCcc-----ccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCccc
Confidence            57899999999776554332     3456789999999999999999999999999999999999999999999999999


Q ss_pred             CchHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccC-Cc
Q 004688          298 NDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NF  376 (737)
Q Consensus       298 ~~p~~L~~~v~~f~D~~~~~~vg~VQtPq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~  376 (737)
                      |||++++++||||+||+.++++||||+||+|+|.+++|+|+|++++||+++++|+||+|||+|+||||+|||+|||| .|
T Consensus       564 Nns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p  643 (1079)
T PLN02638        564 NNSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEP  643 (1079)
T ss_pred             CchHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999 44


Q ss_pred             cccc--------------------------c-------------------------------ch-------HhhHhhhcC
Q 004688          377 KHKG--------------------------I-------------------------------DL-------AELKDTFGE  392 (737)
Q Consensus       377 ~~~~--------------------------~-------------------------------d~-------~~~~~~~~~  392 (737)
                      +...                          .                               +.       .+++++||+
T Consensus       644 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~  723 (1079)
T PLN02638        644 PIKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQ  723 (1079)
T ss_pred             cccccccccccccccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhccc
Confidence            3210                          0                               00       134578999


Q ss_pred             chhHHHhhhhhccccccCCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCC
Q 004688          393 SNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRP  472 (737)
Q Consensus       393 ~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~  472 (737)
                      |.+||+|+..+.++..  +...+++++++|+.|++|.||++|+||+++||.|+|+|||+.||++||++||||+||+|+++
T Consensus       724 S~~fi~S~~~~~~~~~--~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~  801 (1079)
T PLN02638        724 SAVFVASTLMENGGVP--QSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRP  801 (1079)
T ss_pred             cHHHHHHHHHhhcCCC--CCCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCch
Confidence            9999999988875533  23456899999999999999999999999999999999999999999999999999987778


Q ss_pred             eeEeccCCCHHHHHHHhHHHhcchhhhHHhhcCCcccC-CCCCchHHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcCC
Q 004688          473 QFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGI  551 (737)
Q Consensus       473 ~~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~L~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~  551 (737)
                      ++.|+||+|+.+++.||+|||+|++||+++|+||++++ .++|++.||++|+++++|| ++++|.++|+++|++||++|+
T Consensus       802 AF~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp-~~sip~liY~llP~l~Ll~G~  880 (1079)
T PLN02638        802 AFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYP-ITSIPLLLYCTLPAVCLLTGK  880 (1079)
T ss_pred             HhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCC
Confidence            99999999999999999999999999999999999976 3789999999999999999 999999999999999999999


Q ss_pred             CccccccchhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCc
Q 004688          552 PLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVL  631 (737)
Q Consensus       552 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~  631 (737)
                      +++|.++.+++++|+++|+++++++++|++|+|.++++|||+||+|+|.++|+++++++++++|+||+++++|.||+|..
T Consensus       881 ~i~P~vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTsK~~  960 (1079)
T PLN02638        881 FIIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKAS  960 (1079)
T ss_pred             ccCCCccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHccCcccceeccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             chhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHHhhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHHcccC
Q 004688          632 DNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKD  709 (737)
Q Consensus       632 ~~~~~~~y~~~~f~f~~~~~~~~P~~~l~~l~l~al~~gi~r~~~~~--~~~~~~~~~~~~~~~~~~l~p~~~al~~r~~  709 (737)
                      +.++.   ++++|+|+ ++++++|.++++++|++|+++|+++++.++  .|+.+++++|+|+|++++++||++||++|| 
T Consensus       961 d~~~~---~~ely~f~-wS~l~iP~ttl~iiNlvaiv~g~~~~~~~g~~~~~~~~~~~~~~~wvv~~l~Pf~kgl~gR~- 1035 (1079)
T PLN02638        961 DEDGD---FAELYMFK-WTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ- 1035 (1079)
T ss_pred             ccccc---ccceeEec-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence            65432   25899999 999999999999999999999999998755  688999999999999999999999999997 


Q ss_pred             CCCCChhHHHHHHHHHHHHHHh
Q 004688          710 KGRISPSAILLSSVFFVTFLFF  731 (737)
Q Consensus       710 k~~~p~~~~~~~~~~~~~~~~~  731 (737)
                       +|+|+++++||++|+++|+++
T Consensus      1036 -~r~P~~v~v~s~ll~~~~~l~ 1056 (1079)
T PLN02638       1036 -NRTPTIVVVWSILLASIFSLL 1056 (1079)
T ss_pred             -CCCCeeehHHHHHHHHHHHHH
Confidence             788999999999999999885

>PLN02195 cellulose synthase A	Back alignment and domain information

>PLN02436 cellulose synthase A	Back alignment and domain information

>PLN02400 cellulose synthase	Back alignment and domain information

>PLN02189 cellulose synthase	Back alignment and domain information

>PLN02190 cellulose synthase-like protein	Back alignment and domain information

>PLN02893 Cellulose synthase-like protein	Back alignment and domain information

>PLN02248 cellulose synthase-like protein	Back alignment and domain information

>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit	Back alignment and domain information

>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals	Back alignment and domain information

>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional	Back alignment and domain information

>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming)	Back alignment and domain information

>PRK05454 glucosyltransferase MdoH; Provisional	Back alignment and domain information

>PRK14583 hmsR N-glycosyltransferase; Provisional	Back alignment and domain information

>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan	Back alignment and domain information

>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PRK11204 N-glycosyltransferase; Provisional	Back alignment and domain information

>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111	Back alignment and domain information

>PRK14716 bacteriophage N4 adsorption protein B; Provisional	Back alignment and domain information

>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex	Back alignment and domain information

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional	Back alignment and domain information

>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily	Back alignment and domain information

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase	Back alignment and domain information

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A	Back alignment and domain information

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI	Back alignment and domain information

>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin	Back alignment and domain information

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis	Back alignment and domain information

>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional	Back alignment and domain information

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily	Back alignment and domain information

>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan	Back alignment and domain information

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB	Back alignment and domain information

>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan	Back alignment and domain information

>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis	Back alignment and domain information

>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine	Back alignment and domain information

>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2	Back alignment and domain information

>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis	Back alignment and domain information

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis	Back alignment and domain information

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans	Back alignment and domain information

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis	Back alignment and domain information

>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase	Back alignment and domain information

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function	Back alignment and domain information

>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1	Back alignment and domain information

>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine	Back alignment and domain information

>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase	Back alignment and domain information

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>PRK10073 putative glycosyl transferase; Provisional	Back alignment and domain information

>PF13506 Glyco_transf_21: Glycosyl transferase family 21	Back alignment and domain information

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd06423 CESA_like CESA_like is the cellulose synthase superfamily	Back alignment and domain information

>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation	Back alignment and domain information

>PRK10018 putative glycosyl transferase; Provisional	Back alignment and domain information

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase	Back alignment and domain information

>PRK10063 putative glycosyl transferase; Provisional	Back alignment and domain information

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional	Back alignment and domain information

>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2	Back alignment and domain information

>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	Back alignment and domain information

>TIGR01556 rhamnosyltran L-rhamnosyltransferase	Back alignment and domain information

>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1	Back alignment and domain information

>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional	Back alignment and domain information

>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional	Back alignment and domain information

>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ]	Back alignment and domain information

>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold	Back alignment and domain information

>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>COG1216 Predicted glycosyltransferases [General function prediction only]	Back alignment and domain information

>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	Back alignment and domain information

>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]	Back alignment and domain information

>KOG2977 consensus Glycosyltransferase [General function prediction only]	Back alignment and domain information

>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides	Back alignment and domain information

>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2	Back alignment and domain information

>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B	Back alignment and domain information

>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase	Back alignment and domain information

>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function	Back alignment and domain information

>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional	Back alignment and domain information

>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		737
4hg6_A		802	Structure Of A Cellulose Synthase - Cellulose Trans		3e-04

>pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802

Back alignment and structure

Iteration: 1

Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 12/132 (9%) Query: 426 ASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDV 485 S + + E GF+ ++++ED T +H +GW S Y+D R G Sbjct: 319 GSAAVLRRRALDEAGGFAGETITEDAETALEIHSRGWKSLYID--RAMIAGLQPETFASF 376 Query: 486 LIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCY-GEMS--LFPLLYCLPLWCFATL 542 + Q RWA+G++ + + + G + + +CY MS FPL+ + F Sbjct: 377 IQQRGRWATGMMQMLLLKNPLFRRG---LGIAQRLCYLNSMSFWFFPLVRMM----FLVA 429 Query: 543 PQLCLLNGIPLY 554 P + L GI ++ Sbjct: 430 PLIYLFFGIEIF 441

PyMOL of 4hg6

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		737
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 49.1 bits (116), Expect = 5e-06
 Identities = 90/638 (14%), Positives = 168/638 (26%), Gaps = 212/638 (33%)

Query: 115 MNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI--CP 172
           M+         Y  D L V+                          F   +  K +   P
Sbjct: 7   MDFETGEHQYQYK-DILSVFEDA-----------------------FVDNFDCKDVQDMP 42

Query: 173 QAYFSEAESDENFGDSEFVTEKRKIKEKYEMF-------EEQVMKAVEDGEYGNSRNHST 225
           ++  S+ E D        +  K  +     +F       EE V K VE+       N+  
Sbjct: 43  KSILSKEEIDH------IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVL---RINYKF 93

Query: 226 IIEQI---IQDTSGENET-IRQADLV--EMPLLV--YVSREK------------SPEH-- 263
           ++  I    +  S      I Q D +  +  +     VSR +             P    
Sbjct: 94  LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNV 153

Query: 264 -LHHFKGGALNVLLRVSGVISNSPYILGLDCDMY------CNDPTS---ARQAMCFHLDP 313
            +    G     +     V  +      +D  ++      CN P +     Q + + +DP
Sbjct: 154 LIDGVLGSGKTWV--ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDP 211

Query: 314 K-TSSSLAFVQFPQKFHNFNEH------------------DIYDGSLRSGYRLQWPGMDG 354
             TS S        + H+                      ++ +          W   + 
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKA-------WNAFN- 263

Query: 355 LKGPFLTGTGHYIRRESLY---GNFKHKGIDLAELKDTFGES---NLFIKSLHQSYEH-- 406
           L    L  T    R + +           I L     T       +L +K L    +   
Sbjct: 264 LSCKILLTT----RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP 319

Query: 407 ----------------------------KNVNGENLSNVLQQETEVLASCSYEHQTK--- 435
                                       K+VN + L+ +++    VL    Y        
Sbjct: 320 REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS 379

Query: 436 ----------------WGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTST 479
                           W + +      V        ++  +   ST   PS   +L    
Sbjct: 380 VFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS--IYLELKV 437

Query: 480 TNLNDVLIQGTRWASGLID-VSISR-FCPLLYGPSRMS----------LLLSMCYGEMSL 527
              N+  +  +     ++D  +I + F      P  +           L        M+L
Sbjct: 438 KLENEYALHRS-----IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTL 492

Query: 528 FPLLY------------CLPLWCFATLPQLCLLNGIPLYPE---VSSPFF--MVFSFI-F 569
           F +++                W  A+   L  L  +  Y      + P +  +V + + F
Sbjct: 493 FRMVFLDFRFLEQKIRHDSTAWN-ASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDF 551

Query: 570 LSAI------CKH---LQEVIST-GGSVY--TWRNEQR 595
           L  I       K+   L+  +     +++    +  QR
Sbjct: 552 LPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589

PyMOL of 1vt4

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		737
4hg6_A		802	Cellulose synthase subunit A; membrane translocati	100.0
2z86_A		625	Chondroitin synthase; GT-A, glycosyltransferase A,	99.78
1xhb_A		472	Polypeptide N-acetylgalactosaminyltransferase 1; g	99.77
3bcv_A		240	Putative glycosyltransferase protein; protein stru	99.77
1qg8_A		255	Protein (spore coat polysaccharide biosynthesis P	99.74
2d7i_A		570	Polypeptide N-acetylgalactosaminyltransferase 10;	99.72
2ffu_A		501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	99.69
2z86_A		625	Chondroitin synthase; GT-A, glycosyltransferase A,	99.68
3ckj_A		329	Putative uncharacterized protein; mycobacteria, un	99.61
3l7i_A		729	Teichoic acid biosynthesis protein F; GT-B fold, m	99.48
4fix_A		657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	99.47
3f1y_A		387	Mannosyl-3-phosphoglycerate synthase; GT-A type gl	99.39
2fy7_A		287	Beta-1,4-galactosyltransferase 1; M339H mutant, AP	99.38
2nxv_A		249	ATP synthase subunits region ORF 6; majastridin, A	99.11
2bo4_A		397	Mannosylglycerate synthase; catalysis, glycosyltra	98.69
2zu9_A		394	Mannosyl-3-phosphoglycerate synthase; GT-A fold, g	98.01
2wvl_A		391	Mannosyl-3-phosphoglycerate synthase; GT-A fold, t	97.88
1fo8_A		343	Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl	97.67

>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}	Back alignment and structure

Probab=100.00  E-value=5.2e-56  Score=532.29  Aligned_cols=509  Identities=20%  Similarity=0.294  Sum_probs=388.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcccccc-cchhhHHHHHHHHHHHHHHHHHHHHHHhhheeccccCCCCCCCCCCCCCce
Q 004688           19 LNKLHAFLHCIAIALLIYYRASYLLQET-RAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAI   97 (737)
Q Consensus        19 ~~r~~~~~~~~~~~~yl~wR~~~~~~~~-~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~P~V   97 (737)
                      +..+++++.+++.+.|++||++.+++.. ...+.++|++++++|+++.+.+++..+..++|..|...++.  .+++.|+|
T Consensus        65 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~--~~~~~P~V  142 (802)
T 4hg6_A           65 PRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL--QPEELPTV  142 (802)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC--CTTTCCCE
T ss_pred             hHHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC--CccCCCcE
Confidence            3444455555556789999999999864 34567888899999999999999999999999988765543  24678999


Q ss_pred             EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccccc
Q 004688           98 DVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS  177 (737)
Q Consensus        98 dV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r~p~~yf~  177 (737)
                      +|+|||   |||+++++++|+.|+++++||+++++|+|+|||++|.|.+.                              
T Consensus       143 SViIPt---yNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~------------------------------  189 (802)
T 4hg6_A          143 DILVPS---YNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS------------------------------  189 (802)
T ss_dssp             EEEEEC---TTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC------------------------------
T ss_pred             EEEEEE---CCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc------------------------------
Confidence            999999   99998888999999999999999999999999999977531                              


Q ss_pred             ccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccCcEEEEec
Q 004688          178 EAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMPLLVYVSR  257 (737)
Q Consensus       178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P~l~yi~R  257 (737)
                              .+++.+++..+..+..+++..+                                          .++.|+.|
T Consensus       190 --------~d~~i~~~~~~~~~~l~~~~~~------------------------------------------~~v~~i~~  219 (802)
T 4hg6_A          190 --------PDPELAQKAQERRRELQQLCRE------------------------------------------LGVVYSTR  219 (802)
T ss_dssp             --------SSHHHHHHHHHHHHHHHHHHHH------------------------------------------HTCEEEEC
T ss_pred             --------CCHHHHHHHHhhhHHHHHHHHh------------------------------------------cCcEEEEe
Confidence                    1122222211111111111110                                          12568888


Q ss_pred             cCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEEccCceeccCCcC--
Q 004688          258 EKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNEH--  334 (737)
Q Consensus       258 ~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQtPq~f~n~~~~--  334 (737)
                      +++    +++|+||+|.|++.    ++||+|+++|||++++ |+++++++.+| .||+    +++||+++.+.|.+..  
T Consensus       220 ~~~----~~GKa~alN~gl~~----a~gd~Il~lDaD~~~~-pd~L~~lv~~~~~dp~----v~~V~~~~~~~~~~~~~~  286 (802)
T 4hg6_A          220 ERN----EHAKAGNMSAALER----LKGELVVVFDADHVPS-RDFLARTVGYFVEDPD----LFLVQTPHFFINPDPIQR  286 (802)
T ss_dssp             SSC----CSHHHHHHHHHHHH----CCCSEEEECCTTEEEC-TTHHHHHHHHHHHSSS----CCEEECCCCBSSCCHHHH
T ss_pred             cCC----CCcchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHHhcCCC----eEEEeccEEEeCCchHhh
Confidence            764    68999999999999    8999999999999975 99999999999 4776    9999999999875310  


Q ss_pred             -----ChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhcccccc
Q 004688          335 -----DIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNV  409 (737)
Q Consensus       335 -----d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~  409 (737)
                           +.+.++.+.++...+.+.+.+++++++|+++++||+++.                                    
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~------------------------------------  330 (802)
T 4hg6_A          287 NLALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALD------------------------------------  330 (802)
T ss_dssp             HHTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHH------------------------------------
T ss_pred             hhhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHH------------------------------------
Confidence                 112234467788899999999999999999999999992                                    


Q ss_pred             CCccchhhHHHhhhhhccccccccccccccccccCCCccchHHHHHHHHHCCCEEEEeCCCCCeeEeccCCCHHHHHHHh
Q 004688          410 NGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQG  489 (737)
Q Consensus       410 ~~~~~~~~~~~~~~~v~~c~ye~~~~wg~~~G~~~~sltED~~t~~~l~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr  489 (737)
                                                  +.+||++++++||.+++++++++||++.|+++  +.+++.+|+|+.++++||
T Consensus       331 ----------------------------~vGgf~~~~~~ED~~l~~rl~~~G~ri~~~~~--~~~~~~~p~t~~~~~~Qr  380 (802)
T 4hg6_A          331 ----------------------------EAGGFAGETITEDAETALEIHSRGWKSLYIDR--AMIAGLQPETFASFIQQR  380 (802)
T ss_dssp             ----------------------------HHTTCCCSSSSHHHHHHHHHHTTTCCEEECCC--CCEEECCCCSHHHHHHHH
T ss_pred             ----------------------------HcCCcCCCCcchHHHHHHHHHHcCCeEEEecC--CEEEecCCCCHHHHHHHH
Confidence                                        24789999999999999999999999999986  789999999999999999


Q ss_pred             HHHhcchhhhHHhhcCCcccCCCCCchHHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHHcCCCccccccchhHHHHHHHH
Q 004688          490 TRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIF  569 (737)
Q Consensus       490 ~RWa~G~~qi~~~~~~pl~~~~~~L~~~qrl~Y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~~~  569 (737)
                      .||++|.+|+++ +++|++.  +++++.||++|+....++ +.+++.++++++|++++++|++++......++.++++.+
T Consensus       381 ~RW~~G~~q~l~-~~~pl~~--~~l~~~~rl~~l~~~~~~-~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~~lp~~  456 (802)
T 4hg6_A          381 GRWATGMMQMLL-LKNPLFR--RGLGIAQRLCYLNSMSFW-FFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYL  456 (802)
T ss_dssp             HHHHHHHHHHHH-HSCTTSC--SSCCHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHH
T ss_pred             HHHHccHHHHHH-HhCcccc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHH
Confidence            999999999998 5678773  789999999999988888 888999999999999999999887654444433333332


Q ss_pred             HHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhccccceeeecc
Q 004688          570 LSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTS  649 (737)
Q Consensus       570 ~~~~~~~ll~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~  649 (737)
                      +...  .+.... .+.....||+...     .+...++.+..++..++++++.+|+||+|+.+.++      +.  |   
T Consensus       457 l~~~--~~~~~~-~~~~r~~~~~~l~-----~~~~~~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~------~~--~---  517 (802)
T 4hg6_A          457 AVSF--LVQNAL-FARQRWPLVSEVY-----EVAQAPYLARAIVTTLLRPRSARFAVTAKDETLSE------NY--I---  517 (802)
T ss_dssp             HHHH--HHHHHH-HTTTSCTTHHHHH-----HHHHHHHHHHHHHHHHHSTTCCCCCCCCCCCCCSS------CC--B---
T ss_pred             HHHH--HHHHHH-hcCcHHHHHHHHH-----HHHHHHHHHHHHHHHHhCCCCCcceECCCCccccc------cc--h---
Confidence            2211  111222 3444445666532     23244555666777888999999999999976543      11  1   


Q ss_pred             chhHHHHHHHHHHHHHHHHHHHHHhhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHcccCCCCCC
Q 004688          650 SVFLVPMVSLMILNVAALVCGVIRMIAVG-NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRIS  714 (737)
Q Consensus       650 ~~~~~P~~~l~~l~l~al~~gi~r~~~~~-~~~~~~~~~~~~~~~~~~l~p~~~al~~r~~k~~~p  714 (737)
                      +.+++|++++++++++++++|++++.... ......++.+|++++++.+.+.+...+-|+.+++-|
T Consensus       518 ~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~~l~~~~~~~~~~~~~R~~~  583 (802)
T 4hg6_A          518 SPIYRPLLFTFLLCLSGVLATLVRWVAFPGDRSVLLVVGGWAVLNVLLVGFALRAVAEKQQRRAAP  583 (802)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHTTTBCCCCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhccCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence            35788999999999999999999987543 234456677788888777777666655554444433

PyMOL of 4hg6

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*	Back alignment and structure

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17	Back alignment and structure

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}	Back alignment and structure

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*	Back alignment and structure

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*	Back alignment and structure

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*	Back alignment and structure

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*	Back alignment and structure

>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A	Back alignment and structure

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*	Back alignment and structure

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*	Back alignment and structure

>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*	Back alignment and structure

>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...	Back alignment and structure

>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*	Back alignment and structure

>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*	Back alignment and structure

>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*	Back alignment and structure

>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*	Back alignment and structure

>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		737
d1xhba2		328	Polypeptide N-acetylgalactosaminyltransferase 1, N	99.81
d1qg8a_		255	Spore coat polysaccharide biosynthesis protein Sps	99.57
d1omza_		265	Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga	99.34
d2bo4a1		381	Mannosylglycerate synthase, MGS {Rhodothermus mari	97.83
d1fo8a_		343	N-acetylglucosaminyltransferase I {Rabbit (Oryctol	91.98

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=1.4e-19  Score=191.13  Aligned_cols=119  Identities=19%  Similarity=0.062  Sum_probs=94.1

Q ss_pred             CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccC
Q 004688           91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI  170 (737)
Q Consensus        91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~V~DDg~~~~T~~~l~ea~~~a~~w~pfc~~~~v~~r  170 (737)
                      ++++|+|+|+||+   |||....+.+||.|++++.||....+|+|+||||+|.|.....|.                   
T Consensus        18 ~~~~P~vSIIIp~---yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~~~l~~-------------------   75 (328)
T d1xhba2          18 PDNLPTTSVVIVF---HNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLES-------------------   75 (328)
T ss_dssp             CSCCCCEEEEEEE---SSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHH-------------------
T ss_pred             CCCCCCEEEEEec---cCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhHHHHHHH-------------------
Confidence            4678999999999   999867899999999999999876799999999999765322211                   


Q ss_pred             CccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcceeeeeecCCCCCchhhhhccccccC
Q 004688          171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEQIIQDTSGENETIRQADLVEMP  250 (737)
Q Consensus       171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~P  250 (737)
                                                    |.+                                           ...+
T Consensus        76 ------------------------------~~~-------------------------------------------~~~~   82 (328)
T d1xhba2          76 ------------------------------YVK-------------------------------------------KLKV   82 (328)
T ss_dssp             ------------------------------HHH-------------------------------------------SSSS
T ss_pred             ------------------------------HHH-------------------------------------------hcCC
Confidence                                          000                                           0012


Q ss_pred             cEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCC
Q 004688          251 LLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPK  314 (737)
Q Consensus       251 ~l~yi~R~k~p~~~~~~KAGaLN~al~~s~~~s~ge~Il~lDAD~~~~~p~~L~~~v~~f~D~~  314 (737)
                      .+.++..++     +.|+++|.|.|++.    ++||+|+++|+|.++. |++|.+++..|.+.+
T Consensus        83 ~i~vi~~~~-----n~G~~~a~N~Gi~~----a~gd~i~flD~D~~~~-p~~l~~l~~~~~~~~  136 (328)
T d1xhba2          83 PVHVIRMEQ-----RSGLIRARLKGAAV----SRGQVITFLDAHCECT-AGWLEPLLARIKHDR  136 (328)
T ss_dssp             CEEEEECSS-----CCCHHHHHHHHHHH----CCSSEEEEEESSEEEC-TTCHHHHHHHHHHCT
T ss_pred             CeEEEEecc-----cccchHHHHHHHHh----hhcceeeecCcccccC-hhHHHHHHHHHhcCC
Confidence            345555444     46899999999999    9999999999999975 999999999887654

PyMOL of d1xhba2

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}	Back information, alignment and structure

>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}	Back information, alignment and structure