Citrus Sinensis ID: 004691

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730------

MESPLPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI

cccccccccEEccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcEEEEcccccccccccccccccccEEEEEccccccccHHHHHHHHHHHHccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHccccccccccccccccccEEEEEEccccccccccccccHHHHHHHHHcccccccEEEEccccccccccHHHHHHccccccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHcccEEEEEccccccccccccccHHHHHHHHHHccccHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHEEcc

ccccccccccccccHHHcHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHccccccccccEEEEEcccccccccEEEHHHHHHHHHccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEccccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHccccccccEEEEEccccccccccccccccccEEEEEEEccccccccccEEEccccHEEHEEEcccccccccccccccccccccccHcccccHHHHcccccccccHHHHHHHHHHHHcccccccccccccEEEEEcccccEEEcccHEcccccEEEEEccccccccccccccHHHHHHHHHHHHcccEEEEEcccccEEEcccccHHHHHHHHHHHccccHHcHHHHHHHHHHHHHHHccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccEEEEcHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccHHHHHHHHEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHc

mesplplhvchvNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRaylwrpvsrtvfperlpeddklpaidvfictadpekeptfgVMNTVLSAMaldypvdklhvylsddggspitLRGMREAFRFAKWwipfcrryrikticpqayfseaesdenfgdsefvtEKRKIKEKYEMFEEQVMKAVedgeygnsrnhSTIIEIIqdtsgenetiRQADLVEMPLLVYvsrekspehlhhfkGGALNVLLRVSgvisnspyilgldcdmycndptsarqamcfhldpktssslafvqfpqkfhnfnehdiydgslrsgyrlqwpgmdglkgpfltgtghyirreslygnfkhkgidlaelkdtfgesNLFIKSLHQSYehknvngenlSNVLQQETEVLASCSYEhqtkwgeevgFSYQSVSEDFFTGFILHckgwtstyldpsrpqflgtsttnLNDVLIQGTRWASGLIDVSisrfcpllygpsrMSLLLSMCygemslfpllyclplwcfatlpqlcllngiplypevsspffmVFSFIFLSAICKHLQEVIStggsvytwrnEQRIWMIKSVTSHFYGSMDAIMKLLGLrkasflptnkvldneqvkryemgqfdfqtssvFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIvrkdkgrispsaiLLSSVFFVTFLFFGSIILI

MESPLPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFperlpeddklPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFseaesdenfgdsefVTEKRKIKEKYEMFEEQVMKAVedgeygnsrNHSTIIEiiqdtsgenETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI

*****PLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS**********************************************STIIEIIQDTSG*NETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIIL*

****LPL*VCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSE************VTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYE**********NVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTN*********RYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI

****LPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI

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MESPLPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEAESDENFGDSEFVTExxxxxxxxxxxxxxxxxxxxxGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		736	2.2.26 [Sep-21-2011]
Q651X6		728	Cellulose synthase-like p	yes	no	0.929	0.939	0.379	1e-138
Q651X7		737	Cellulose synthase-like p	yes	no	0.927	0.926	0.368	1e-137
Q8VYR4		722	Cellulose synthase-like p	yes	no	0.926	0.944	0.358	1e-132
Q0WVN5		751	Cellulose synthase-like p	no	no	0.944	0.925	0.355	1e-130
Q570S7		760	Cellulose synthase-like p	no	no	0.921	0.892	0.359	1e-130
Q0DXZ1		745	Cellulose synthase-like p	no	no	0.911	0.900	0.355	1e-129
Q8VZK9		729	Cellulose synthase-like p	no	no	0.889	0.898	0.348	1e-123
Q8LPK5		985	Cellulose synthase A cata	no	no	0.923	0.690	0.326	1e-115
Q69P51		1055	Cellulose synthase A cata	no	no	0.951	0.663	0.313	1e-112
A2Z1C8		1055	Cellulose synthase A cata	N/A	no	0.951	0.663	0.313	1e-112

>sp\|Q651X6\|CSLE6_ORYSJ Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1	Back alignment and function desciption

 Score =  493 bits (1270), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 279/735 (37%), Positives = 410/735 (55%), Gaps = 51/735 (6%)

Query: 21  KLHAFLHCIAIALLIYYRASYL--LQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRP 78
           +L A      I L++YYRA+ +    E RA     WL + A+EL  +  W++ ++  W P
Sbjct: 24  RLQAATVAAGILLVLYYRATRVPAAGEGRA----AWLGMAAAELWFAVYWVITQSVRWCP 79

Query: 79  VSRTVFPERLPE--DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLS 136
           V R  F  RL E   + LP +DVF+CTADP  EP   V++T+LS MA +YP +K+ VYLS
Sbjct: 80  VRRRTFKNRLAERYKENLPGVDVFVCTADPHAEPPSLVISTILSVMAYNYPSEKISVYLS 139

Query: 137 DDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEAESDENFGDSEFVTEKRK 196
           DDGGS +T   + EA  FAK W+PFCRRY I+   P AYFSE+E   N    +   E   
Sbjct: 140 DDGGSILTFYALWEASMFAKKWLPFCRRYNIEPRSPAAYFSESEGHHNLCSPK---EWSF 196

Query: 197 IKEKYEMFEEQVMKAVEDGEYG-----------------NSRNHSTIIEIIQDTSGENET 239
           IK  YE   E++  AV  G+                    S+NH  I++++ D   +N  
Sbjct: 197 IKNLYEEMRERIDSAVMSGKIPEEIKLKHKGFDEWNSEMTSKNHQPIVQVLIDGKSQNAV 256

Query: 240 IRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDP 299
               ++  +P LVY++REKSP++ H+FK GALN L+RVS +IS+SP IL +DCDMY N+ 
Sbjct: 257 DDDGNV--LPTLVYMAREKSPQYHHNFKAGALNALIRVSALISDSPVILNVDCDMYSNNS 314

Query: 300 TSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFL 359
            S R A+CF LD + S  + FVQ+PQ ++N  +++IY  SL     ++  G+D   G   
Sbjct: 315 DSIRDALCFFLDEEMSHKIGFVQYPQNYNNMTKNNIYGNSLNVINHVEMRGLDSAGGCLY 374

Query: 360 TGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQ 419
            GTG + RRE L G    K     + K+ +G          +   H+N++       +++
Sbjct: 375 IGTGCFHRREILCGKKFSK-----DYKEDWGRG-------IKERGHENIDE------IEE 416

Query: 420 ETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTT 479
           + + LA+C+YE +T+WG E+G  Y    ED  TG  +HC+GW S Y++P R  F+G +  
Sbjct: 417 KAKSLATCTYELRTQWGNEIGVKYGCPVEDVITGLAIHCRGWESVYMEPQRAAFVGVAPA 476

Query: 480 NLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFA 539
            L   ++Q  RW+ G   + +S+    L+G  ++SL L M Y    L+     LP   + 
Sbjct: 477 TLAQTILQHKRWSEGNFTIFLSKHNTFLFGHGKISLQLQMGYCIYGLWA-ANSLPTIYYV 535

Query: 540 TLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIK 599
            +P L L+ G PL+PE+ SP+   F ++F       L E + +G ++  W N QR+WM+K
Sbjct: 536 MIPALGLVKGTPLFPEIMSPWATPFIYVFCVKTLYSLYEALLSGDTLKGWWNGQRMWMVK 595

Query: 600 SVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLM 659
            +TS+ YG +D I KLLGL K SF  T KV D ++ KRYE    +F +SS   V + ++ 
Sbjct: 596 RITSYLYGFIDTIRKLLGLSKMSFEITAKVSDGDEAKRYEQEILEFGSSSPEFVIIATVA 655

Query: 660 ILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILL 719
           +LN   LV G+ +++A G W+    QV+L   I+I N  I E M VRKDKGRI P  + L
Sbjct: 656 LLNFVCLVAGLSKIMA-GVWNVFLPQVILCGLIVITNIPIYEAMFVRKDKGRI-PLPVTL 713

Query: 720 SSVFFVTFLFFGSII 734
           +S+ FV   F   I+
Sbjct: 714 ASIGFVMLAFLLPIV 728

Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp\|Q651X7\|CSLE1_ORYSJ Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2	Back alignment and function description

>sp\|Q8VYR4\|CSLG2_ARATH Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1	Back alignment and function description

>sp\|Q0WVN5\|CSLG3_ARATH Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2	Back alignment and function description

>sp\|Q570S7\|CSLG1_ARATH Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1	Back alignment and function description

>sp\|Q0DXZ1\|CSLE2_ORYSJ Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1	Back alignment and function description

>sp\|Q8VZK9\|CSLE1_ARATH Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1	Back alignment and function description

>sp\|Q8LPK5\|CESA8_ARATH Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1	Back alignment and function description

>sp\|Q69P51\|CESA9_ORYSJ Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1	Back alignment and function description

>sp\|A2Z1C8\|CESA9_ORYSI Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		736
224111028		857	predicted protein [Populus trichocarpa]	0.997	0.856	0.594	0.0
359477703		733	PREDICTED: cellulose synthase-like prote	0.983	0.987	0.607	0.0
297737188		822	unnamed protein product [Vitis vinifera]	0.982	0.879	0.587	0.0
255576870		762	cellulose synthase, putative [Ricinus co	0.957	0.925	0.610	0.0
356548660		736	PREDICTED: cellulose synthase-like prote	0.971	0.971	0.609	0.0
356535446		740	PREDICTED: cellulose synthase-like prote	0.975	0.970	0.585	0.0
429326514		723	cellulose synthase-like protein [Populus	0.968	0.986	0.591	0.0
224111026		723	predicted protein [Populus trichocarpa]	0.968	0.986	0.588	0.0
359477392		678	PREDICTED: cellulose synthase-like prote	0.904	0.982	0.560	0.0
255576868		711	cellulose synthase, putative [Ricinus co	0.948	0.981	0.563	0.0

>gi\|224111028\|ref\|XP_002315722.1\| predicted protein [Populus trichocarpa] gi\|222864762\|gb\|EEF01893.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  949 bits (2454), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 483/813 (59%), Positives = 597/813 (73%), Gaps = 79/813 (9%)

Query: 1   MESPLPLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIP---WLLV 57
           ME   PLH+CHV+  S+ +N+LH  LH IAIA LIYYRAS+L QE +  + +P   WLLV
Sbjct: 46  MEISPPLHLCHVSKTSIFINRLHGLLHSIAIAFLIYYRASFLFQEPQTKATVPMLLWLLV 105

Query: 58  FASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNT 117
           F +ELLLSFIWL+G+AY W PVSRTVFPERLPEDDKLPAIDVFICT DP+KEPT  VMNT
Sbjct: 106 FVAELLLSFIWLIGQAYHWHPVSRTVFPERLPEDDKLPAIDVFICTVDPDKEPTLDVMNT 165

Query: 118 VLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS 177
           VLSAMALDYP +KL++YLSDDGG+ +TL GM+EA+RFAK W+PFC++Y IKT CP+AYFS
Sbjct: 166 VLSAMALDYPAEKLNLYLSDDGGAAVTLHGMKEAWRFAKSWLPFCKKYGIKTRCPKAYFS 225

Query: 178 E-AESDENFGDS-EFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNS------RNHSTIIE- 228
             ++ D++FG S EF+ +++ I+EKYE F+E+VM+  ED     +      R+H  +IE 
Sbjct: 226 ATSKDDDSFGSSNEFMADRQIIQEKYEDFKERVMRFREDFVLEETKSDITGRDHPALIEA 285

Query: 229 -------------------------------IIQDTSGENETIRQADLVEMPLLVYVSRE 257
                                          +IQD S E     +A+  EMPLLVYVSRE
Sbjct: 286 FLKKKELSPNWSLVIGKGKGGLTDAEHEADTVIQDNSNEEAPKDEAN--EMPLLVYVSRE 343

Query: 258 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSS 317
           K P H HHFK GALNVLLRVSGVISNSP+IL LDCDMYCNDPTSARQAMCF  DP  SSS
Sbjct: 344 KRPSHPHHFKAGALNVLLRVSGVISNSPHILVLDCDMYCNDPTSARQAMCFFFDPNISSS 403

Query: 318 LAFVQFPQKFHNFNEHDIYDGSLRSGY-------------RLQWPGMDGLKGPFLTGTGH 364
           LAFVQFPQ+FHN ++HDIYD  LRS +             ++ W G+DGLKGP L+GTG 
Sbjct: 404 LAFVQFPQRFHNISKHDIYDSQLRSTFGVRLVFIDFTLLNQILWQGLDGLKGPVLSGTGF 463

Query: 365 YIRRESLYGNFKHKGI---------------------DLAELKDTFGESNLFIKSLHQSY 403
           YI+R SLYG+   KG+                     +L EL+DTFG SN F+ S+ Q+Y
Sbjct: 464 YIKRNSLYGDSMQKGLVLSNPNHAASSQHALDDPKSCNLLELRDTFGLSNEFVNSIRQNY 523

Query: 404 EHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTS 463
           +   ++  ++S++L QET +LASC Y   TKWGEE  F Y SV+EDFFTGFILHCKGW S
Sbjct: 524 KANPMSYGSVSSMLLQETRILASCDYPRHTKWGEEACFLYHSVAEDFFTGFILHCKGWLS 583

Query: 464 TYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGE 523
            YL+PSRPQFLGTS T+LND+LIQGTRW+SGL++V +SRFCPL+YG  RMS L S+CY E
Sbjct: 584 VYLNPSRPQFLGTSITSLNDLLIQGTRWSSGLVEVGLSRFCPLIYGTLRMSFLESLCYAE 643

Query: 524 MSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTG 583
           +SLFPL YCLPLWCFAT+PQLCLLNGIPLYP+VSS FF+VFSFIFLSA+ KHL EV+ +G
Sbjct: 644 ISLFPLFYCLPLWCFATIPQLCLLNGIPLYPKVSSSFFIVFSFIFLSAVSKHLYEVLKSG 703

Query: 584 GSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQF 643
           GS+ T   EQR+WM+KSV++H YGS+DA+MK +G+R+ASFLPTNK  D E+ K Y+MG+F
Sbjct: 704 GSINTLVYEQRLWMMKSVSTHTYGSLDAVMKRIGVREASFLPTNKAADEEKFKLYQMGKF 763

Query: 644 DFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGM 703
           DF+TSS+ LVPMV+++ILN+A+ V GVIR+I  GNWD +  QV LS YIL++N AI+EGM
Sbjct: 764 DFKTSSMLLVPMVTVIILNMASFVLGVIRIIIAGNWDSMVVQVFLSSYILVMNSAIIEGM 823

Query: 704 IVRKDKGRISPSAILLSSVFFVTFLFFGSIILI 736
            +RKDKG I  S I+LS+VF + FL  GS  L+
Sbjct: 824 TIRKDKGCIPLSVIVLSTVFSIIFLCLGSFFLM 856

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359477703\|ref\|XP_002280696.2\| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|297737188\|emb\|CBI26389.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255576870\|ref\|XP_002529321.1\| cellulose synthase, putative [Ricinus communis] gi\|223531245\|gb\|EEF33090.1\| cellulose synthase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|356548660\|ref\|XP_003542718.1\| PREDICTED: cellulose synthase-like protein G2-like [Glycine max]	Back alignment and taxonomy information

>gi\|356535446\|ref\|XP_003536256.1\| PREDICTED: cellulose synthase-like protein G2-like [Glycine max]	Back alignment and taxonomy information

>gi\|429326514\|gb\|AFZ78597.1\| cellulose synthase-like protein [Populus tomentosa]	Back alignment and taxonomy information

>gi\|224111026\|ref\|XP_002315721.1\| predicted protein [Populus trichocarpa] gi\|222864761\|gb\|EEF01892.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|359477392\|ref\|XP_002280640.2\| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255576868\|ref\|XP_002529320.1\| cellulose synthase, putative [Ricinus communis] gi\|223531244\|gb\|EEF33089.1\| cellulose synthase, putative [Ricinus communis]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		736
TAIR\|locus:2124167		985	IRX1 "IRREGULAR XYLEM 1" [Arab	0.463	0.346	0.380	1.6e-105
TAIR\|locus:2176090		1084	CESA6 "cellulose synthase 6" [	0.463	0.314	0.385	5.3e-102
TAIR\|locus:2178935		1026	IRX3 "IRREGULAR XYLEM 3" [Arab	0.394	0.282	0.389	5.8e-102
TAIR\|locus:2136308		1084	CESA2 "cellulose synthase A2"	0.375	0.254	0.404	1.1e-101
TAIR\|locus:2052576		1088	CESA9 "cellulose synthase A9"	0.485	0.328	0.357	1.8e-101
TAIR\|locus:2178193		1069	CESA5 "cellulose synthase 5" [	0.463	0.318	0.374	3.7e-101
TAIR\|locus:2172457		1049	CESA4 "cellulose synthase A4"	0.385	0.270	0.386	5.1e-100
TAIR\|locus:2156789		1065	CEV1 "CONSTITUTIVE EXPRESSION	0.461	0.319	0.360	1.6e-99
TAIR\|locus:2040080		1065	CESA10 "cellulose synthase 10"	0.486	0.336	0.355	1.4e-98
TAIR\|locus:2127776		1081	CESA1 "cellulose synthase 1" [	0.463	0.315	0.358	1.3e-97

TAIR\|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 576 (207.8 bits), Expect = 1.6e-105, Sum P(2) = 1.6e-105
 Identities = 141/371 (38%), Positives = 205/371 (55%)

Query:    26 LHCIAIALLIYYRASYLLQETRAI---SIIPWLLVFASELLLSFI-WL-LGR-AYLWRPV 79
             +  I +AL   YR ++ +     +   S+I  +    S +L  F  W  + R  Y+ R  
Sbjct:   189 MRLIILALFFNYRITHPVDSAYGLWLTSVICEIWFAVSWVLDQFPKWSPINRETYIDRLS 248

Query:    80 SRTVFPERLPEDDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDG 139
             +R  F ER  E  +L A+D F+ T DP KEP     NTVLS +ALDYPVDK+  Y+SDDG
Sbjct:   249 AR--F-EREGEQSQLAAVDFFVSTVDPLKEPPLITANTVLSILALDYPVDKVSCYVSDDG 305

Query:   140 GSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS-EAESDENFGDSEFVTEKRKIK 198
              + ++   + E   FA+ W+PFC++Y I+   P+ YFS + +   +     FV E+R +K
Sbjct:   306 AAMLSFESLVETADFARKWVPFCKKYSIEPRAPEFYFSLKIDYLRDKVQPSFVKERRAMK 365

Query:   199 EKYEMFEEQ----VMKAVEDGEYG------------NSRNHSTIIEIIQDTSGENETIRQ 242
               YE F+ +    V KA +  E G            N+R+H  +I++    SG     R 
Sbjct:   366 RDYEEFKIRMNALVAKAQKTPEEGWTMQDGTSWPGNNTRDHPGMIQVFLGYSGA----RD 421

Query:   243 ADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSA 302
              +  E+P LVYVSREK P + HH K GA N L+RVS V++N+P+IL LDCD Y N+  + 
Sbjct:   422 IEGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPFILNLDCDHYVNNSKAV 481

Query:   303 RQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGT 362
             R+AMCF +DP     + FVQFPQ+F   ++ D Y       + +   G+DG++GP   GT
Sbjct:   482 REAMCFLMDPVVGQDVCFVQFPQRFDGIDKSDRYANRNIVFFDVNMRGLDGIQGPVYVGT 541

Query:   363 GHYIRRESLYG 373
             G   RR++LYG
Sbjct:   542 GTVFRRQALYG 552

GO:0005886 "plasma membrane" evidence=ISM;TAS

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0016759 "cellulose synthase activity" evidence=ISS;IMP

GO:0016760 "cellulose synthase (UDP-forming) activity" evidence=IEA

GO:0030244 "cellulose biosynthetic process" evidence=IEA;IMP

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0005618 "cell wall" evidence=IDA

GO:0006970 "response to osmotic stress" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0009863 "salicylic acid mediated signaling pathway" evidence=IGI

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=IGI

GO:0009873 "ethylene mediated signaling pathway" evidence=IGI

GO:0010116 "positive regulation of abscisic acid biosynthetic process" evidence=IGI

GO:0042742 "defense response to bacterium" evidence=IMP

GO:0050832 "defense response to fungus" evidence=IMP

GO:0052386 "cell wall thickening" evidence=IMP

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR\|locus:2176090 CESA6 "cellulose synthase 6" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2136308 CESA2 "cellulose synthase A2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2052576 CESA9 "cellulose synthase A9" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2127776 CESA1 "cellulose synthase 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8VYR4	CSLG2_ARATH	2, ., 4, ., 1, ., -	0.3586	0.9266	0.9445	yes	no
Q651X7	CSLE1_ORYSJ	2, ., 4, ., 1, ., -	0.3689	0.9279	0.9267	yes	no
Q651X6	CSLE6_ORYSJ	2, ., 4, ., 1, ., -	0.3795	0.9293	0.9395	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.691
4th Layer	2.4.1.12	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_X0687	hypothetical protein (857 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		736
PLN02893		734	PLN02893, PLN02893, Cellulose synthase-like protei	0.0
PLN02189		1040	PLN02189, PLN02189, cellulose synthase	1e-134
PLN02190		756	PLN02190, PLN02190, cellulose synthase-like protei	1e-123
PLN02248		1135	PLN02248, PLN02248, cellulose synthase-like protei	1e-98
PLN02436		1094	PLN02436, PLN02436, cellulose synthase A	6e-77
pfam03552		716	pfam03552, Cellulose_synt, Cellulose synthase	5e-76
PLN02915		1044	PLN02915, PLN02915, cellulose synthase A [UDP-form	4e-75
PLN02195		977	PLN02195, PLN02195, cellulose synthase A	1e-74
PLN02638		1079	PLN02638, PLN02638, cellulose synthase A (UDP-form	8e-74
PLN02400		1085	PLN02400, PLN02400, cellulose synthase	4e-72
pfam03552		716	pfam03552, Cellulose_synt, Cellulose synthase	4e-53
PLN02915		1044	PLN02915, PLN02915, cellulose synthase A [UDP-form	6e-53
PLN02195		977	PLN02195, PLN02195, cellulose synthase A	9e-52
PLN02436		1094	PLN02436, PLN02436, cellulose synthase A	4e-49
PLN02638		1079	PLN02638, PLN02638, cellulose synthase A (UDP-form	9e-49
PLN02400		1085	PLN02400, PLN02400, cellulose synthase	8e-48
TIGR03030		713	TIGR03030, CelA, cellulose synthase catalytic subu	2e-12
cd06421		234	cd06421, CESA_CelA_like, CESA_CelA_like are involv	2e-10
cd06421		234	cd06421, CESA_CelA_like, CESA_CelA_like are involv	7e-10
PRK11498		852	PRK11498, bcsA, cellulose synthase catalytic subun	4e-09
cd06421		234	cd06421, CESA_CelA_like, CESA_CelA_like are involv	2e-08
TIGR03030		713	TIGR03030, CelA, cellulose synthase catalytic subu	4e-07
COG1215		439	COG1215, COG1215, Glycosyltransferases, probably i	1e-05
PRK11498		852	PRK11498, bcsA, cellulose synthase catalytic subun	2e-04
pfam13632		194	pfam13632, Glyco_trans_2_3, Glycosyl transferase f	0.004

>gnl\|CDD\|215483 PLN02893, PLN02893, Cellulose synthase-like protein	Back alignment and domain information

 Score =  625 bits (1614), Expect = 0.0
 Identities = 290/761 (38%), Positives = 436/761 (57%), Gaps = 71/761 (9%)

Query: 6   PLHVCHVNNLSVILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLS 65
           PLH CH      I N++ A ++  AI  L+Y+    LL  T   + +  LL+  ++++L+
Sbjct: 13  PLHTCHPMR-RTIANRVFAVVYSCAILALLYHHVIALLHST---TTLITLLLLLADIVLA 68

Query: 66  FIWLLGRAYLWRPVSRTVFPERL----PEDDKLPAIDVFICTADPEKEPTFGVMNTVLSA 121
           F+W   +A+   PV R VF E L     E D  P +DVFICTADP KEP  GV+NT LS 
Sbjct: 69  FMWATTQAFRMCPVHRRVFIEHLEHYAKESD-YPGLDVFICTADPYKEPPMGVVNTALSV 127

Query: 122 MALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFSEAES 181
           MA DYP +KL VY+SDDGGS +TL    EA +FA  W+PFC++ +I   CP+AYFS    
Sbjct: 128 MAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHWLPFCKKNKIVERCPEAYFSSNSH 187

Query: 182 DENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNS--------------------R 221
                   +  E  +IK  YE  + +V   VE G+                        +
Sbjct: 188 -------SWSPETEQIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQ 240

Query: 222 NHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVI 281
           +H T+I+++ + SG+++ I       MP L+YVSREKS    HHFK GALN LLRVS  +
Sbjct: 241 DHPTVIQVLLE-SGKDKDITGHT---MPNLIYVSREKSKNSPHHFKAGALNTLLRVSATM 296

Query: 282 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLR 341
           +N+P IL LDCDMY NDP +  +A+C+ LDP     L +VQFPQ FH  N++DIY G L+
Sbjct: 297 TNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELK 356

Query: 342 SGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQ 401
             +++   GMDGL GP   GTG + RR   YG                G S+L       
Sbjct: 357 RLFQINMIGMDGLAGPNYVGTGCFFRRRVFYG----------------GPSSLI------ 394

Query: 402 SYEHKNVNGENLSNVLQQETEVLAS------CSYEHQTKWGEEVGFSYQSVSEDFFTGFI 455
             E   +N ++L +   +  EVLA       C+YE+QT WG ++GF Y S+ ED++TG+ 
Sbjct: 395 LPEIPELNPDHLVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYR 454

Query: 456 LHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSL 515
           L C+GW S + +P RP FLG S  NL+DVL Q  RW+ GL++V+ S++ P+ +G   + L
Sbjct: 455 LQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGL 514

Query: 516 LLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKH 575
           L+ + Y   + +P ++ +P+  +A LPQL LLNG+ ++P+ S P+F ++ F+FL A  + 
Sbjct: 515 LMGLGYAHYAFWP-IWSIPITIYAFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQD 573

Query: 576 LQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQV 635
           L + + +GG++  W N+QR+WMI+ ++S  +G ++ ++K LG+    F  T+KV+D EQ 
Sbjct: 574 LLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVTSKVVDEEQS 633

Query: 636 KRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILII 695
           KRYE G F+F  SS   +P+ +  I+N+ + + G+ ++    N + LF Q+ L+ + ++ 
Sbjct: 634 KRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQRNLEGLFLQMFLAGFAVVN 693

Query: 696 NFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFF-GSIIL 735
            + I E M++R D G++ P  I L S+     L+   S   
Sbjct: 694 CWPIYEAMVLRTDDGKL-PVKITLISIVLAWALYLASSFAF 733

Length = 734

>gnl\|CDD\|215121 PLN02189, PLN02189, cellulose synthase	Back alignment and domain information

>gnl\|CDD\|215122 PLN02190, PLN02190, cellulose synthase-like protein	Back alignment and domain information

>gnl\|CDD\|215138 PLN02248, PLN02248, cellulose synthase-like protein	Back alignment and domain information

>gnl\|CDD\|215239 PLN02436, PLN02436, cellulose synthase A	Back alignment and domain information

>gnl\|CDD\|217611 pfam03552, Cellulose_synt, Cellulose synthase	Back alignment and domain information

>gnl\|CDD\|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit	Back alignment and domain information

>gnl\|CDD\|215124 PLN02195, PLN02195, cellulose synthase A	Back alignment and domain information

>gnl\|CDD\|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit	Back alignment and domain information

>gnl\|CDD\|215224 PLN02400, PLN02400, cellulose synthase	Back alignment and domain information

>gnl\|CDD\|217611 pfam03552, Cellulose_synt, Cellulose synthase	Back alignment and domain information

>gnl\|CDD\|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit	Back alignment and domain information

>gnl\|CDD\|215124 PLN02195, PLN02195, cellulose synthase A	Back alignment and domain information

>gnl\|CDD\|215239 PLN02436, PLN02436, cellulose synthase A	Back alignment and domain information

>gnl\|CDD\|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit	Back alignment and domain information

>gnl\|CDD\|215224 PLN02400, PLN02400, cellulose synthase	Back alignment and domain information

>gnl\|CDD\|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming)	Back alignment and domain information

>gnl\|CDD\|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>gnl\|CDD\|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>gnl\|CDD\|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional	Back alignment and domain information

>gnl\|CDD\|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>gnl\|CDD\|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming)	Back alignment and domain information

>gnl\|CDD\|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>gnl\|CDD\|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional	Back alignment and domain information

>gnl\|CDD\|222273 pfam13632, Glyco_trans_2_3, Glycosyl transferase family group 2	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		736
PLN02638		1079	cellulose synthase A (UDP-forming), catalytic subu	100.0
PLN02436		1094	cellulose synthase A	100.0
PLN02400		1085	cellulose synthase	100.0
PLN02195		977	cellulose synthase A	100.0
PLN02189		1040	cellulose synthase	100.0
PLN02190		756	cellulose synthase-like protein	100.0
PLN02893		734	Cellulose synthase-like protein	100.0
PLN02915		1044	cellulose synthase A [UDP-forming], catalytic subu	100.0
PLN02248		1135	cellulose synthase-like protein	100.0
PF03552		720	Cellulose_synt: Cellulose synthase; InterPro: IPR0	100.0
PRK11498		852	bcsA cellulose synthase catalytic subunit; Provisi	100.0
TIGR03030		713	CelA cellulose synthase catalytic subunit (UDP-for	100.0
PRK05454		691	glucosyltransferase MdoH; Provisional	100.0
PRK14583		444	hmsR N-glycosyltransferase; Provisional	100.0
cd04191		254	Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon	100.0
TIGR03111		439	glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0	100.0
COG1215		439	Glycosyltransferases, probably involved in cell wa	100.0
PRK11204		420	N-glycosyltransferase; Provisional	100.0
PRK14716		504	bacteriophage N4 adsorption protein B; Provisional	100.0
cd06437		232	CESA_CaSu_A2 Cellulose synthase catalytic subunit	99.97
cd06421		234	CESA_CelA_like CESA_CelA_like are involved in the	99.97
PRK11234		727	nfrB bacteriophage N4 adsorption protein B; Provis	99.97
cd06427		241	CESA_like_2 CESA_like_2 is a member of the cellulo	99.97
cd06435		236	CESA_NdvC_like NdvC_like proteins in this family a	99.96
PF13641		228	Glyco_tranf_2_3: Glycosyltransferase like family 2	99.95
TIGR03472		373	HpnI hopanoid biosynthesis associated glycosyl tra	99.95
cd04190		244	Chitin_synth_C C-terminal domain of Chitin Synthas	99.94
PRK15489		703	nfrB bacteriophage N4 adsorption protein B; Provis	99.93
cd02520		196	Glucosylceramide_synthase Glucosylceramide synthas	99.93
cd04192		229	GT_2_like_e Subfamily of Glycosyltransferase Famil	99.92
cd06439		251	CESA_like_1 CESA_like_1 is a member of the cellulo	99.92
cd06434		235	GT2_HAS Hyaluronan synthases catalyze polymerizati	99.92
COG2943		736	MdoH Membrane glycosyltransferase [Cell envelope b	99.92
TIGR03469		384	HonB hopene-associated glycosyltransferase HpnB. T	99.92
cd02525		249	Succinoglycan_BP_ExoA ExoA is involved in the bios	99.86
cd06438		183	EpsO_like EpsO protein participates in the methano	99.81
cd06436		191	GlcNAc-1-P_transferase N-acetyl-glucosamine transf	99.81
PF13632		193	Glyco_trans_2_3: Glycosyl transferase family group	99.75
cd04184		202	GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot	99.74
cd04195		201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	99.71
cd02510		299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	99.67
cd06433		202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	99.67
PLN02726		243	dolichyl-phosphate beta-D-mannosyltransferase	99.66
cd04196		214	GT_2_like_d Subfamily of Glycosyltransferase Famil	99.64
cd02522		221	GT_2_like_a GT_2_like_a represents a glycosyltrans	99.61
cd06442		224	DPM1_like DPM1_like represents putative enzymes si	99.6
cd06913		219	beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran	99.6
cd06420		182	GT2_Chondriotin_Pol_N N-terminal domain of Chondro	99.59
cd04186		166	GT_2_like_c Subfamily of Glycosyltransferase Famil	99.59
PRK10073		328	putative glycosyl transferase; Provisional	99.58
PF13506		175	Glyco_transf_21: Glycosyl transferase family 21	99.57
cd04185		202	GT_2_like_b Subfamily of Glycosyltransferase Famil	99.53
cd04188		211	DPG_synthase DPG_synthase is involved in protein N	99.52
cd06423		180	CESA_like CESA_like is the cellulose synthase supe	99.51
PRK10063		248	putative glycosyl transferase; Provisional	99.5
PRK10018		279	putative glycosyl transferase; Provisional	99.5
cd02526		237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	99.5
PF03142		527	Chitin_synth_2: Chitin synthase; InterPro: IPR0048	99.49
PF00535		169	Glycos_transf_2: Glycosyl transferase family 2; In	99.45
PTZ00260		333	dolichyl-phosphate beta-glucosyltransferase; Provi	99.44
cd04179		185	DPM_DPG-synthase_like DPM_DPG-synthase_like is a m	99.42
TIGR01556		281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	99.29
cd04187		181	DPM1_like_bac Bacterial DPM1_like enzymes are rela	99.26
PRK13915		306	putative glucosyl-3-phosphoglycerate synthase; Pro	99.23
PRK10714		325	undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi	99.22
PF10111		281	Glyco_tranf_2_2: Glycosyltransferase like family 2	99.18
cd00761		156	Glyco_tranf_GTA_type Glycosyltransferase family A	99.15
KOG2571		862	consensus Chitin synthase/hyaluronan synthase (gly	99.1
COG1216		305	Predicted glycosyltransferases [General function p	99.07
COG0463		291	WcaA Glycosyltransferases involved in cell wall bi	98.83
cd02511		229	Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4	98.81
KOG2547		431	consensus Ceramide glucosyltransferase [Lipid tran	98.68
KOG2978		238	consensus Dolichol-phosphate mannosyltransferase [	98.26
KOG2977		323	consensus Glycosyltransferase [General function pr	98.02
cd02514		334	GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es	97.75
KOG3737		603	consensus Predicted polypeptide N-acetylgalactosam	96.33
KOG3738		559	consensus Predicted polypeptide N-acetylgalactosam	95.99
PF02364		817	Glucan_synthase: 1,3-beta-glucan synthase componen	95.98
KOG3736		578	consensus Polypeptide N-acetylgalactosaminyltransf	95.03
PF13704		97	Glyco_tranf_2_4: Glycosyl transferase family 2	94.82
PF13712		217	Glyco_tranf_2_5: Glycosyltransferase like family;	94.3
TIGR02460		381	osmo_MPGsynth mannosyl-3-phosphoglycerate synthase	91.89
PRK14503		393	mannosyl-3-phosphoglycerate synthase; Provisional	91.53
PF09488		381	Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthas	90.55
COG4092		346	Predicted glycosyltransferase involved in capsule	88.08
PRK14502		694	bifunctional mannosyl-3-phosphoglycerate synthase/	87.8
PF03452		269	Anp1: Anp1; InterPro: IPR005109 The members of thi	86.91
PF03071		434	GNT-I: GNT-I family; InterPro: IPR004139 The biosy	86.18
KOG0916		1679	consensus 1,3-beta-glucan synthase/callose synthas	82.69
PF01644		163	Chitin_synth_1: Chitin synthase; InterPro: IPR0048	81.53
cd00899		219	b4GalT Beta-4-Galactosyltransferase is involved in	80.67

>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit	Back alignment and domain information

Probab=100.00  E-value=1e-171  Score=1487.86  Aligned_cols=711  Identities=33%  Similarity=0.646  Sum_probs=658.0

Q ss_pred             CCCCceEEeecCchh-hHHHHHHHHHHHHHHHHHHHhhhcccccccchhhHHHHHHHHHHHHHHHHHHHHHHhhheeccc
Q 004691            3 SPLPLHVCHVNNLSV-ILNKLHAFLHCIAIALLIYYRASYLLQETRAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSR   81 (736)
Q Consensus         3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~~l~wR~~~~~~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r   81 (736)
                      +.+|||++++.++.. .+||+++++++++++++++||+++..    .++.|+|+++++||+||+|+|+|.|+.||+|++|
T Consensus       253 ~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv~R  328 (1079)
T PLN02638        253 ARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPV----RNAYALWLISVICEIWFALSWILDQFPKWLPVNR  328 (1079)
T ss_pred             CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccC----CccHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence            478899999988873 57999999999999999999999853    3568999999999999999999999999999999


Q ss_pred             cCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHh
Q 004691           82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRF  154 (736)
Q Consensus        82 ~~~~~~l~~-------~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~  154 (736)
                      .+++++|.+       +++||.|||||+|+||++|||.+++|||+|+||.|||.|||.|||+|||++.+|+++|.||++|
T Consensus       329 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F  408 (1079)
T PLN02638        329 ETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEF  408 (1079)
T ss_pred             ccCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence            999998753       2469999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhhhhcccccCCcccccccc-ccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-------CC---------C
Q 004691          155 AKWWIPFCRRYRIKTICPQAYFSEA-ESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVED-------GE---------Y  217 (736)
Q Consensus       155 a~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~-------g~---------~  217 (736)
                      ||+||||||||+|||||||+||+.+ ++.+++.+++|++||++||++|||||+|||.+.++       |+         +
T Consensus       409 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g  488 (1079)
T PLN02638        409 ARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPG  488 (1079)
T ss_pred             HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCC
Confidence            9999999999999999999999988 55678888999999999999999999999987522       11         4


Q ss_pred             CCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 004691          218 GNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCN  297 (736)
Q Consensus       218 ~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~  297 (736)
                      .+++|||+||||+++++++.    |.++.++|+|+||+||||||++||+||||||+++|+|++|||||||+++||||++|
T Consensus       489 ~~~~dHp~IiqVll~~~~~~----d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiN  564 (1079)
T PLN02638        489 NNTRDHPGMIQVFLGHSGGL----DTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYIN  564 (1079)
T ss_pred             CCCCCCHHHHHHHhcCCCcc----ccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccC
Confidence            57899999999999987753    45677899999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHhhcCCCCCCceEEEccCceeccCCcCChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccC-Ccc
Q 004691          298 DPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-NFK  376 (736)
Q Consensus       298 ~p~~L~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~-~~~  376 (736)
                      ||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++++|+||+|||+||||||+|||+|||| .|+
T Consensus       565 ns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~  644 (1079)
T PLN02638        565 NSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPP  644 (1079)
T ss_pred             chHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcCCc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999 443


Q ss_pred             ccc--------------------------c-------------------------------ch-------HhhHhhhcCc
Q 004691          377 HKG--------------------------I-------------------------------DL-------AELKDTFGES  392 (736)
Q Consensus       377 ~~~--------------------------~-------------------------------d~-------~~~~~~~~~~  392 (736)
                      ...                          .                               +.       ..++++||+|
T Consensus       645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S  724 (1079)
T PLN02638        645 IKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQS  724 (1079)
T ss_pred             ccccccccccccccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhcccc
Confidence            210                          0                               00       1345789999


Q ss_pred             hhHHHhhhhhccccccCCccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCe
Q 004691          393 NLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQ  472 (736)
Q Consensus       393 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~  472 (736)
                      .+|++|+..+.++..  ....+++++++|+.|++|.||++|+||+++||.|+|+|||+.||++||++||||+||+|++++
T Consensus       725 ~~fi~S~~~~~~~~~--~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~A  802 (1079)
T PLN02638        725 AVFVASTLMENGGVP--QSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPA  802 (1079)
T ss_pred             HHHHHHHHHhhcCCC--CCCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchH
Confidence            999999988875543  234568999999999999999999999999999999999999999999999999999877789


Q ss_pred             eeeccCCCHHHHHHHHHHHhccchhhhhhhcCccccC-CCCCChhHHHHHHhhhHhhHHhHHHHHHHHHHHHHHHHcCCC
Q 004691          473 FLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYG-PSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIP  551 (736)
Q Consensus       473 ~~g~aP~tl~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~  551 (736)
                      +.|+||+|+.+++.||+|||+|++||+++|+||+++| .++|++.||++|+++++|| ++++|.++|+++|++||++|++
T Consensus       803 F~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp-~~sip~liY~llP~l~Ll~G~~  881 (1079)
T PLN02638        803 FKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYP-ITSIPLLLYCTLPAVCLLTGKF  881 (1079)
T ss_pred             hcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCc
Confidence            9999999999999999999999999999999999976 3789999999999999999 9999999999999999999999


Q ss_pred             cccccchhhHHHHHHHHHHHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcc
Q 004691          552 LYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLD  631 (736)
Q Consensus       552 ~~~~~~~~~~~~~~~l~i~~~~~~ll~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~  631 (736)
                      ++|.++.+++++|+++|+++++++++|++|+|.++++|||+||+|+|.+++++++++++++++++|+++++|.||+|..+
T Consensus       882 i~P~vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTsK~~d  961 (1079)
T PLN02638        882 IIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASD  961 (1079)
T ss_pred             cCCCccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHccCcccceecccccc
Confidence            99999999899999999999999999999999999999999999999999999999999999999999999999999876


Q ss_pred             hhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHhhhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 004691          632 NEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRKDK  709 (736)
Q Consensus       632 ~~~~~~y~~~~f~f~~~~~~~~P~~~l~~l~l~al~~g~~r~~~~~--~~~~~~~~~~~~~~~l~~l~p~~~al~~r~~~  709 (736)
                      .+..   ++++|+|+ ++++++|.++++++|++|+++|+++.+.++  .|+++++++|+++|++++++||++||++||  
T Consensus       962 ~~~~---~~ely~f~-wS~l~iP~ttl~iiNlvaiv~g~~~~~~~g~~~~~~~~~~~~~~~wvv~~l~Pf~kgl~gR~-- 1035 (1079)
T PLN02638        962 EDGD---FAELYMFK-WTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ-- 1035 (1079)
T ss_pred             cccc---ccceeEec-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccC--
Confidence            4432   25899999 999999999999999999999999998755  688999999999999999999999999997  


Q ss_pred             CCCChhHHHHHHHHHHHHHHh
Q 004691          710 GRISPSAILLSSVFFVTFLFF  730 (736)
Q Consensus       710 ~~~p~~~~~~~~~~~~~~~~~  730 (736)
                      +|+|+++++||++|+++|+++
T Consensus      1036 ~r~P~~v~v~s~ll~~~~~l~ 1056 (1079)
T PLN02638       1036 NRTPTIVVVWSILLASIFSLL 1056 (1079)
T ss_pred             CCCCeeehHHHHHHHHHHHHH
Confidence            888999999999999999985

>PLN02436 cellulose synthase A	Back alignment and domain information

>PLN02400 cellulose synthase	Back alignment and domain information

>PLN02195 cellulose synthase A	Back alignment and domain information

>PLN02189 cellulose synthase	Back alignment and domain information

>PLN02190 cellulose synthase-like protein	Back alignment and domain information

>PLN02893 Cellulose synthase-like protein	Back alignment and domain information

>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit	Back alignment and domain information

>PLN02248 cellulose synthase-like protein	Back alignment and domain information

>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals	Back alignment and domain information

>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional	Back alignment and domain information

>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming)	Back alignment and domain information

>PRK05454 glucosyltransferase MdoH; Provisional	Back alignment and domain information

>PRK14583 hmsR N-glycosyltransferase; Provisional	Back alignment and domain information

>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan	Back alignment and domain information

>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111	Back alignment and domain information

>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PRK11204 N-glycosyltransferase; Provisional	Back alignment and domain information

>PRK14716 bacteriophage N4 adsorption protein B; Provisional	Back alignment and domain information

>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex	Back alignment and domain information

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional	Back alignment and domain information

>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily	Back alignment and domain information

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase	Back alignment and domain information

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A	Back alignment and domain information

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI	Back alignment and domain information

>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin	Back alignment and domain information

>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional	Back alignment and domain information

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis	Back alignment and domain information

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily	Back alignment and domain information

>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan	Back alignment and domain information

>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB	Back alignment and domain information

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan	Back alignment and domain information

>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis	Back alignment and domain information

>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine	Back alignment and domain information

>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2	Back alignment and domain information

>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis	Back alignment and domain information

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis	Back alignment and domain information

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans	Back alignment and domain information

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis	Back alignment and domain information

>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase	Back alignment and domain information

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function	Back alignment and domain information

>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1	Back alignment and domain information

>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine	Back alignment and domain information

>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase	Back alignment and domain information

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>PRK10073 putative glycosyl transferase; Provisional	Back alignment and domain information

>PF13506 Glyco_transf_21: Glycosyl transferase family 21	Back alignment and domain information

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation	Back alignment and domain information

>cd06423 CESA_like CESA_like is the cellulose synthase superfamily	Back alignment and domain information

>PRK10063 putative glycosyl transferase; Provisional	Back alignment and domain information

>PRK10018 putative glycosyl transferase; Provisional	Back alignment and domain information

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase	Back alignment and domain information

>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2	Back alignment and domain information

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional	Back alignment and domain information

>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	Back alignment and domain information

>TIGR01556 rhamnosyltran L-rhamnosyltransferase	Back alignment and domain information

>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1	Back alignment and domain information

>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional	Back alignment and domain information

>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional	Back alignment and domain information

>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ]	Back alignment and domain information

>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold	Back alignment and domain information

>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>COG1216 Predicted glycosyltransferases [General function prediction only]	Back alignment and domain information

>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	Back alignment and domain information

>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]	Back alignment and domain information

>KOG2977 consensus Glycosyltransferase [General function prediction only]	Back alignment and domain information

>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides	Back alignment and domain information

>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2	Back alignment and domain information

>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B	Back alignment and domain information

>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase	Back alignment and domain information

>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional	Back alignment and domain information

>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis	Back alignment and domain information

>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional	Back alignment and domain information

>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function	Back alignment and domain information

>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2	Back alignment and domain information

>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		736
4hg6_A		802	Structure Of A Cellulose Synthase - Cellulose Trans		3e-04

>pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802

Back alignment and structure

Iteration: 1

Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 12/132 (9%) Query: 425 ASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDV 484 S + + E GF+ ++++ED T +H +GW S Y+D R G Sbjct: 319 GSAAVLRRRALDEAGGFAGETITEDAETALEIHSRGWKSLYID--RAMIAGLQPETFASF 376 Query: 485 LIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCY-GEMS--LFPLLYCLPLWCFATL 541 + Q RWA+G++ + + + G + + +CY MS FPL+ + F Sbjct: 377 IQQRGRWATGMMQMLLLKNPLFRRG---LGIAQRLCYLNSMSFWFFPLVRMM----FLVA 429 Query: 542 PQLCLLNGIPLY 553 P + L GI ++ Sbjct: 430 PLIYLFFGIEIF 441

PyMOL of 4hg6

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		736
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 47.9 bits (113), Expect = 1e-05
 Identities = 90/638 (14%), Positives = 168/638 (26%), Gaps = 213/638 (33%)

Query: 115 MNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI--CP 172
           M+         Y  D L V+                          F   +  K +   P
Sbjct: 7   MDFETGEHQYQYK-DILSVFEDA-----------------------FVDNFDCKDVQDMP 42

Query: 173 QAYFSEAESDENFGDSEFVTEKRKIKEKYEMF-------EEQVMKAVEDGEYGNSRNHST 225
           ++  S+ E D        +  K  +     +F       EE V K VE+       N+  
Sbjct: 43  KSILSKEEIDH------IIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVL---RINYKF 93

Query: 226 IIEIIQ----DTSGENET-IRQADLV--EMPLLV--YVSREK------------SPEH-- 262
           ++  I+      S      I Q D +  +  +     VSR +             P    
Sbjct: 94  LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNV 153

Query: 263 -LHHFKGGALNVLLRVSGVISNSPYILGLDCDMY------CNDPTS---ARQAMCFHLDP 312
            +    G     +     V  +      +D  ++      CN P +     Q + + +DP
Sbjct: 154 LIDGVLGSGKTWV--ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDP 211

Query: 313 K-TSSSLAFVQFPQKFHNFNEH------------------DIYDGSLRSGYRLQWPGMDG 353
             TS S        + H+                      ++ +          W   + 
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKA-------WNAFN- 263

Query: 354 LKGPFLTGTGHYIRRESLY---GNFKHKGIDLAELKDTFGES---NLFIKSLHQSYEH-- 405
           L    L  T    R + +           I L     T       +L +K L    +   
Sbjct: 264 LSCKILLTT----RFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLP 319

Query: 406 ----------------------------KNVNGENLSNVLQQETEVLASCSYEHQTK--- 434
                                       K+VN + L+ +++    VL    Y        
Sbjct: 320 REVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS 379

Query: 435 ----------------WGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTST 478
                           W + +      V        ++  +   ST   PS   +L    
Sbjct: 380 VFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPS--IYLELKV 437

Query: 479 TNLNDVLIQGTRWASGLID-VSISR-FCPLLYGPSRMS----------LLLSMCYGEMSL 526
              N+  +  +     ++D  +I + F      P  +           L        M+L
Sbjct: 438 KLENEYALHRS-----IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTL 492

Query: 527 FPLLY------------CLPLWCFATLPQLCLLNGIPLYPE---VSSPFF--MVFSFI-F 568
           F +++                W  A+   L  L  +  Y      + P +  +V + + F
Sbjct: 493 FRMVFLDFRFLEQKIRHDSTAWN-ASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDF 551

Query: 569 LSAI------CKH---LQEVIST-GGSVY--TWRNEQR 594
           L  I       K+   L+  +     +++    +  QR
Sbjct: 552 LPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQVQR 589

PyMOL of 1vt4

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		736
4hg6_A		802	Cellulose synthase subunit A; membrane translocati	100.0
2z86_A		625	Chondroitin synthase; GT-A, glycosyltransferase A,	99.78
1xhb_A		472	Polypeptide N-acetylgalactosaminyltransferase 1; g	99.77
3bcv_A		240	Putative glycosyltransferase protein; protein stru	99.76
1qg8_A		255	Protein (spore coat polysaccharide biosynthesis P	99.74
2d7i_A		570	Polypeptide N-acetylgalactosaminyltransferase 10;	99.71
2ffu_A		501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	99.69
2z86_A		625	Chondroitin synthase; GT-A, glycosyltransferase A,	99.67
3ckj_A		329	Putative uncharacterized protein; mycobacteria, un	99.62
3l7i_A		729	Teichoic acid biosynthesis protein F; GT-B fold, m	99.48
4fix_A		657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	99.47
3f1y_A		387	Mannosyl-3-phosphoglycerate synthase; GT-A type gl	99.4
2fy7_A		287	Beta-1,4-galactosyltransferase 1; M339H mutant, AP	99.37
2nxv_A		249	ATP synthase subunits region ORF 6; majastridin, A	99.13
2bo4_A		397	Mannosylglycerate synthase; catalysis, glycosyltra	98.76
2zu9_A		394	Mannosyl-3-phosphoglycerate synthase; GT-A fold, g	98.13
2wvl_A		391	Mannosyl-3-phosphoglycerate synthase; GT-A fold, t	98.02
1fo8_A		343	Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl	97.68

>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}	Back alignment and structure

Probab=100.00  E-value=5.5e-56  Score=532.19  Aligned_cols=509  Identities=20%  Similarity=0.293  Sum_probs=388.3

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhcccccc-cchhhHHHHHHHHHHHHHHHHHHHHHHhhheeccccCCCCCCCCCCCCCce
Q 004691           19 LNKLHAFLHCIAIALLIYYRASYLLQET-RAISIIPWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAI   97 (736)
Q Consensus        19 ~~r~~~~~~~~~~~~~l~wR~~~~~~~~-~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~P~V   97 (736)
                      +..+++++.+++.+.|++||++.+++.. ...+.++|++++++|+++.+.+++..+..++|..|...++.  .+++.|+|
T Consensus        65 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~--~~~~~P~V  142 (802)
T 4hg6_A           65 PRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL--QPEELPTV  142 (802)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC--CTTTCCCE
T ss_pred             hHHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC--CccCCCcE
Confidence            3444555555556789999999999864 34567888899999999999999999999999988755443  24678999


Q ss_pred             EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccCCcccccc
Q 004691           98 DVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTICPQAYFS  177 (736)
Q Consensus        98 dV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r~p~~yf~  177 (736)
                      +|+|||   |||+++++++|+.|+++++||.++++|+|+|||++|.|.+.                              
T Consensus       143 SViIPt---yNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~------------------------------  189 (802)
T 4hg6_A          143 DILVPS---YNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS------------------------------  189 (802)
T ss_dssp             EEEEEC---TTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC------------------------------
T ss_pred             EEEEEE---CCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc------------------------------
Confidence            999999   99998888999999999999999999999999999977531                              


Q ss_pred             ccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCeEEEEecc
Q 004691          178 EAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSRE  257 (736)
Q Consensus       178 ~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~  257 (736)
                              .+++.+++..+..+..+++..+                                         .++.|+.|+
T Consensus       190 --------~d~~i~~~~~~~~~~l~~~~~~-----------------------------------------~~v~~i~~~  220 (802)
T 4hg6_A          190 --------PDPELAQKAQERRRELQQLCRE-----------------------------------------LGVVYSTRE  220 (802)
T ss_dssp             --------SSHHHHHHHHHHHHHHHHHHHH-----------------------------------------HTCEEEECS
T ss_pred             --------CCHHHHHHHHhhhHHHHHHHHh-----------------------------------------cCcEEEEec
Confidence                    1122222211111111111110                                         036788887


Q ss_pred             CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhc-CCCCCCceEEEccCceeccCCcC---
Q 004691          258 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKTSSSLAFVQFPQKFHNFNEH---  333 (736)
Q Consensus       258 k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~~~---  333 (736)
                      ++    +++|+||+|.|++.    ++||||+++|||++++ ||+|++++.+|. ||+    +++||+++.+.|.+..   
T Consensus       221 ~~----~~GKa~alN~gl~~----a~gd~Il~lDaD~~~~-pd~L~~lv~~~~~dp~----v~~V~~~~~~~~~~~~~~~  287 (802)
T 4hg6_A          221 RN----EHAKAGNMSAALER----LKGELVVVFDADHVPS-RDFLARTVGYFVEDPD----LFLVQTPHFFINPDPIQRN  287 (802)
T ss_dssp             SC----CSHHHHHHHHHHHH----CCCSEEEECCTTEEEC-TTHHHHHHHHHHHSSS----CCEEECCCCBSSCCHHHHH
T ss_pred             CC----CCcchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHHhcCCC----eEEEeccEEEeCCchHhhh
Confidence            64    68999999999999    8999999999999975 999999999994 776    9999999999875310   


Q ss_pred             ----ChHHHHHHHhhhhHHhHhhhcCCcccccccceeehhhccCCccccccchHhhHhhhcCchhHHHhhhhhccccccC
Q 004691          334 ----DIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVN  409 (736)
Q Consensus       334 ----d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~AL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~  409 (736)
                          +.+.++.+.++...+.+.+.+++++++|+++++||+++.                                     
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~-------------------------------------  330 (802)
T 4hg6_A          288 LALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALD-------------------------------------  330 (802)
T ss_dssp             HTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHH-------------------------------------
T ss_pred             hhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHH-------------------------------------
Confidence                112234467788899999999999999999999999992                                     


Q ss_pred             CccchhhHHHhhhhhccceeeccccccccccccCCCccchHHHHHHHHHcCcEEEEeCCCCCeeeeccCCCHHHHHHHHH
Q 004691          410 GENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGT  489 (736)
Q Consensus       410 ~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~~~Qr~  489 (736)
                                                 +.+||++++++||.+++++++++||++.|+++  +.+++.+|+|++++++||.
T Consensus       331 ---------------------------~vGgf~~~~~~ED~~l~~rl~~~G~ri~~~~~--~~~~~~~p~t~~~~~~Qr~  381 (802)
T 4hg6_A          331 ---------------------------EAGGFAGETITEDAETALEIHSRGWKSLYIDR--AMIAGLQPETFASFIQQRG  381 (802)
T ss_dssp             ---------------------------HHTTCCCSSSSHHHHHHHHHHTTTCCEEECCC--CCEEECCCCSHHHHHHHHH
T ss_pred             ---------------------------HcCCcCCCCcchHHHHHHHHHHcCCeEEEecC--CEEEecCCCCHHHHHHHHH
Confidence                                       24689999999999999999999999999986  7899999999999999999


Q ss_pred             HHhccchhhhhhhcCccccCCCCCChhHHHHHHhhhHhhHHhHHHHHHHHHHHHHHHHcCCCcccccchhhHHHHHHHHH
Q 004691          490 RWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFL  569 (736)
Q Consensus       490 RWa~G~~qi~~~~~~pl~~~~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~i  569 (736)
                      ||++|.+|+++ +++|++.  +++++.||++|+....++ +.+++.++++++|++++++|++++......++.++++.++
T Consensus       382 RW~~G~~q~l~-~~~pl~~--~~l~~~~rl~~l~~~~~~-~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~~lp~~l  457 (802)
T 4hg6_A          382 RWATGMMQMLL-LKNPLFR--RGLGIAQRLCYLNSMSFW-FFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYLA  457 (802)
T ss_dssp             HHHHHHHHHHH-HSCTTSC--SSCCHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHH
T ss_pred             HHHccHHHHHH-HhCcccc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHH
Confidence            99999999998 4678774  789999999999988888 8889999999999999999998876544444333333222


Q ss_pred             HHHHHHHHHHHHhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhccccceeeeccc
Q 004691          570 SAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSS  649 (736)
Q Consensus       570 ~~~~~~ll~~~~~g~~~~~w~~~~~~w~i~~~~~~~~~~~~~l~~~lg~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~~  649 (736)
                      ...+  +... ..+.....||++..     .+...++.+..++..++++++.+|+||+|+.+.++      ..     .+
T Consensus       458 ~~~~--~~~~-~~~~~r~~~~~~l~-----~~~~~~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~------~~-----~~  518 (802)
T 4hg6_A          458 VSFL--VQNA-LFARQRWPLVSEVY-----EVAQAPYLARAIVTTLLRPRSARFAVTAKDETLSE------NY-----IS  518 (802)
T ss_dssp             HHHH--HHHH-HHTTTSCTTHHHHH-----HHHHHHHHHHHHHHHHHSTTCCCCCCCCCCCCCSS------CC-----BC
T ss_pred             HHHH--HHHH-HhcCcHHHHHHHHH-----HHHHHHHHHHHHHHHHhCCCCCcceECCCCccccc------cc-----hh
Confidence            2111  1112 23444445665532     23345556666777888999999999999986543      11     13


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHhhhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 004691          650 VFLVPMVSLMILNVAALVCGVIRMIAVG-NWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRIS  713 (736)
Q Consensus       650 ~~~~P~~~l~~l~l~al~~g~~r~~~~~-~~~~~~~~~~~~~~~l~~l~p~~~al~~r~~~~~~p  713 (736)
                      .+++|++++++++++++++|++++.... ......++++|++++++.+.+.+...+-|+..++-|
T Consensus       519 ~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~~l~~~~~~~~~~~~~R~~~  583 (802)
T 4hg6_A          519 PIYRPLLFTFLLCLSGVLATLVRWVAFPGDRSVLLVVGGWAVLNVLLVGFALRAVAEKQQRRAAP  583 (802)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHTTTBCCCCSCCCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhccCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence            5788999999999999999999987543 234456677788777777776666555454444433

PyMOL of 4hg6

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*	Back alignment and structure

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17	Back alignment and structure

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}	Back alignment and structure

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*	Back alignment and structure

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*	Back alignment and structure

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*	Back alignment and structure

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*	Back alignment and structure

>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A	Back alignment and structure

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*	Back alignment and structure

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*	Back alignment and structure

>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*	Back alignment and structure

>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...	Back alignment and structure

>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*	Back alignment and structure

>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*	Back alignment and structure

>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*	Back alignment and structure

>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*	Back alignment and structure

>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		736
d1xhba2		328	Polypeptide N-acetylgalactosaminyltransferase 1, N	99.81
d1qg8a_		255	Spore coat polysaccharide biosynthesis protein Sps	99.57
d1omza_		265	Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga	99.34
d2bo4a1		381	Mannosylglycerate synthase, MGS {Rhodothermus mari	97.89
d1fo8a_		343	N-acetylglucosaminyltransferase I {Rabbit (Oryctol	92.98

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=1.8e-19  Score=190.33  Aligned_cols=119  Identities=18%  Similarity=0.053  Sum_probs=94.1

Q ss_pred             CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchHhHHHHHHhhhhhhhhhhhcccccC
Q 004691           91 DDKLPAIDVFICTADPEKEPTFGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLRGMREAFRFAKWWIPFCRRYRIKTI  170 (736)
Q Consensus        91 ~~~~P~VdV~Vpt~~pynEp~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~~a~~w~pfc~~~~v~~r  170 (736)
                      ++++|.|+|+||+   |||....+.+||.|++++.||....+|+|+||||+|.|..+..|..                  
T Consensus        18 ~~~~P~vSIIIp~---yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~~~l~~~------------------   76 (328)
T d1xhba2          18 PDNLPTTSVVIVF---HNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESY------------------   76 (328)
T ss_dssp             CSCCCCEEEEEEE---SSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHH------------------
T ss_pred             CCCCCCEEEEEec---cCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhHHHHHHHH------------------
Confidence            4678999999999   9997678999999999999998767999999999997654322210                  


Q ss_pred             CccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCCchhhhhccccCcCe
Q 004691          171 CPQAYFSEAESDENFGDSEFVTEKRKIKEKYEMFEEQVMKAVEDGEYGNSRNHSTIIEIIQDTSGENETIRQADLVEMPL  250 (736)
Q Consensus       171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~~~~y~~~~~ri~~~~~~g~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~p~  250 (736)
                                                     .+                                          ..-+.
T Consensus        77 -------------------------------~~------------------------------------------~~~~~   83 (328)
T d1xhba2          77 -------------------------------VK------------------------------------------KLKVP   83 (328)
T ss_dssp             -------------------------------HH------------------------------------------SSSSC
T ss_pred             -------------------------------HH------------------------------------------hcCCC
Confidence                                           00                                          00113


Q ss_pred             EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCC
Q 004691          251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPK  313 (736)
Q Consensus       251 l~yv~R~k~p~~~~~~KAGaLN~al~~~~~~t~g~~Il~lDAD~~~~~p~~L~~~v~~f~D~~  313 (736)
                      +.++..++     +.|+++|.|.|++.    ++||+|+++|+|.++ +|++|.+++..|.+.+
T Consensus        84 i~vi~~~~-----n~G~~~a~N~Gi~~----a~gd~i~flD~D~~~-~p~~l~~l~~~~~~~~  136 (328)
T d1xhba2          84 VHVIRMEQ-----RSGLIRARLKGAAV----SRGQVITFLDAHCEC-TAGWLEPLLARIKHDR  136 (328)
T ss_dssp             EEEEECSS-----CCCHHHHHHHHHHH----CCSSEEEEEESSEEE-CTTCHHHHHHHHHHCT
T ss_pred             eEEEEecc-----cccchHHHHHHHHh----hhcceeeecCccccc-ChhHHHHHHHHHhcCC
Confidence            55554444     57899999999999    999999999999987 5999999999997544

PyMOL of d1xhba2

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}	Back information, alignment and structure

>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}	Back information, alignment and structure