Citrus Sinensis ID: 004692

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730------

MDSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI

ccccccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEccccccccccccccccccccEEEEccccccccHHHHHHHHHHHHcccccccccEEEEEcccccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHcccccccHHHccccccccEEEEEEccccccccccccccHHHHHHHHHcccccccEEEEcccccccccccHHHHHccccccccccccEEEEEcccccccccccccccccccccEEcccccccccccccccccccEEccccccccccccccccccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHccccEEEEcccccccccccccccHHHHHHHHHHccccHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHccccccEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHEEcc

ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHcccccccccEEEEEcccccccccEEEHHHHHHHHHccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEccccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHccccccccEEEEEccccccccccccccccccEEEEEEEccccccccccEEEccccHEEHEHEcccccccccccccccccccccHHHcccccHHHHcccccccccHHHHHHHHHHHHcccccccccccccEEEEEcccccEEEcccEEcccccEEEEEccccccccccccccHHHHHHHHHHHHcccEEEEEcccccEEEcccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccEEEEcHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccHHHHHHHHEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHc

mdsplplhvchvNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRaylwrpvsrtvfperlpeddklpaidvfictadpekepaiGVMNTVLSAMaldypvdklhvylsddggspitlHGMREACRFAKWwlpfcrrygikticpqayfseadsddyfgdseFMVEKKKIKEKYEMFEEHVTKAvedgeygnsqnhSTIIEIIqdtsgenetiRQADLVEMPLLVYvsrekspehlhhfkGGALNVLLRVSgvisnspyilgldcdmycndptsarqamcfhldpktssslafvqfpqkfhnfnehdiydgslrsgyrlqwpgmdglkgpfltgtghyirreslygnfkhkgidlaelkdtfgesNLFIKSLHQSYehknvngenlSNVLQQETEVLASCSYEhqtkwgeevgFSYQSVSEDFFTGFILHckgwtstyldpsrpqflgtsttnLNDVLIQGTRWASGLIDVSisrfcpllygpsrMSLLLSMCygemslfpllyclplwcfatlpqlcllngiplypevsspffmVFSFIFLSAICKHLQEVIStggsvytwrnEQRIWMIKSVTSHFYGSMDAIMKLLGLrkasflptnkvldneqvkryemgqfdfqtssvFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIvrkdkgrispsaiLLSSVFFVTFLFFGSIILI

MDSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFperlpeddklpAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAvedgeygnsqNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI

*****PLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAV***********STIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIIL*

***PLPL*VCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEA****YFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTS*ENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQ*************NVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLP*************EMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI

****LPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFFGSIILI

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iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoo

SSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiii

iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHo

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no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		736	2.2.26 [Sep-21-2011]
Q651X6		728	Cellulose synthase-like p	yes	no	0.932	0.942	0.377	1e-137
Q651X7		737	Cellulose synthase-like p	yes	no	0.930	0.929	0.367	1e-137
Q8VYR4		722	Cellulose synthase-like p	yes	no	0.926	0.944	0.364	1e-133
Q570S7		760	Cellulose synthase-like p	no	no	0.917	0.888	0.362	1e-131
Q0WVN5		751	Cellulose synthase-like p	no	no	0.940	0.921	0.358	1e-131
Q0DXZ1		745	Cellulose synthase-like p	no	no	0.879	0.868	0.359	1e-128
Q8VZK9		729	Cellulose synthase-like p	no	no	0.921	0.930	0.341	1e-122
Q8LPK5		985	Cellulose synthase A cata	no	no	0.949	0.709	0.323	1e-115
Q69P51		1055	Cellulose synthase A cata	no	no	0.936	0.653	0.317	1e-114
A2Z1C8		1055	Cellulose synthase A cata	N/A	no	0.936	0.653	0.317	1e-114

>sp\|Q651X6\|CSLE6_ORYSJ Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1	Back alignment and function desciption

 Score =  491 bits (1263), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 278/737 (37%), Positives = 409/737 (55%), Gaps = 51/737 (6%)

Query: 19  INRLHALLHCIAIGFLIYYRASYL--LQETRAIPIILWLLVFASELLLSFIWLLGRAYLW 76
           + RL A      I  ++YYRA+ +    E RA     WL + A+EL  +  W++ ++  W
Sbjct: 22  VYRLQAATVAAGILLVLYYRATRVPAAGEGRAA----WLGMAAAELWFAVYWVITQSVRW 77

Query: 77  RPVSRTVFPERLPE--DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVY 134
            PV R  F  RL E   + LP +DVF+CTADP  EP   V++T+LS MA +YP +K+ VY
Sbjct: 78  CPVRRRTFKNRLAERYKENLPGVDVFVCTADPHAEPPSLVISTILSVMAYNYPSEKISVY 137

Query: 135 LSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEK 194
           LSDDGGS +T + + EA  FAK WLPFCRRY I+   P AYFSE++        +   E 
Sbjct: 138 LSDDGGSILTFYALWEASMFAKKWLPFCRRYNIEPRSPAAYFSESEGHHNLCSPK---EW 194

Query: 195 KKIKEKYEMFEEHVTKAVEDGEYG-----------------NSQNHSTIIEIIQDTSGEN 237
             IK  YE   E +  AV  G+                    S+NH  I++++ D   +N
Sbjct: 195 SFIKNLYEEMRERIDSAVMSGKIPEEIKLKHKGFDEWNSEMTSKNHQPIVQVLIDGKSQN 254

Query: 238 ETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCN 297
                 ++  +P LVY++REKSP++ H+FK GALN L+RVS +IS+SP IL +DCDMY N
Sbjct: 255 AVDDDGNV--LPTLVYMAREKSPQYHHNFKAGALNALIRVSALISDSPVILNVDCDMYSN 312

Query: 298 DPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGP 357
           +  S R A+CF LD + S  + FVQ+PQ ++N  +++IY  SL     ++  G+D   G 
Sbjct: 313 NSDSIRDALCFFLDEEMSHKIGFVQYPQNYNNMTKNNIYGNSLNVINHVEMRGLDSAGGC 372

Query: 358 FLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVNGENLSNVL 417
              GTG + RRE L G    K     + K+ +G          +   H+N++       +
Sbjct: 373 LYIGTGCFHRREILCGKKFSK-----DYKEDWGRG-------IKERGHENIDE------I 414

Query: 418 QQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTS 477
           +++ + LA+C+YE +T+WG E+G  Y    ED  TG  +HC+GW S Y++P R  F+G +
Sbjct: 415 EEKAKSLATCTYELRTQWGNEIGVKYGCPVEDVITGLAIHCRGWESVYMEPQRAAFVGVA 474

Query: 478 TTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWC 537
              L   ++Q  RW+ G   + +S+    L+G  ++SL L M Y    L+     LP   
Sbjct: 475 PATLAQTILQHKRWSEGNFTIFLSKHNTFLFGHGKISLQLQMGYCIYGLWA-ANSLPTIY 533

Query: 538 FATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWM 597
           +  +P L L+ G PL+PE+ SP+   F ++F       L E + +G ++  W N QR+WM
Sbjct: 534 YVMIPALGLVKGTPLFPEIMSPWATPFIYVFCVKTLYSLYEALLSGDTLKGWWNGQRMWM 593

Query: 598 IKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSSVFLVPMVS 657
           +K +TS+ YG +D I KLLGL K SF  T KV D ++ KRYE    +F +SS   V + +
Sbjct: 594 VKRITSYLYGFIDTIRKLLGLSKMSFEITAKVSDGDEAKRYEQEILEFGSSSPEFVIIAT 653

Query: 658 LMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRISPSAI 717
           + +LN   LV G+ +++A G W+    QV+L   I+I N  I E M VRKDKGRI P  +
Sbjct: 654 VALLNFVCLVAGLSKIMA-GVWNVFLPQVILCGLIVITNIPIYEAMFVRKDKGRI-PLPV 711

Query: 718 LLSSVFFVTFLFFGSII 734
            L+S+ FV   F   I+
Sbjct: 712 TLASIGFVMLAFLLPIV 728

Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -

>sp\|Q651X7\|CSLE1_ORYSJ Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2	Back alignment and function description

>sp\|Q8VYR4\|CSLG2_ARATH Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1	Back alignment and function description

>sp\|Q570S7\|CSLG1_ARATH Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1	Back alignment and function description

>sp\|Q0WVN5\|CSLG3_ARATH Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2	Back alignment and function description

>sp\|Q0DXZ1\|CSLE2_ORYSJ Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1	Back alignment and function description

>sp\|Q8VZK9\|CSLE1_ARATH Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1	Back alignment and function description

>sp\|Q8LPK5\|CESA8_ARATH Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1	Back alignment and function description

>sp\|Q69P51\|CESA9_ORYSJ Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1	Back alignment and function description

>sp\|A2Z1C8\|CESA9_ORYSI Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		736
224111028		857	predicted protein [Populus trichocarpa]	0.997	0.856	0.602	0.0
359477703		733	PREDICTED: cellulose synthase-like prote	0.983	0.987	0.610	0.0
297737188		822	unnamed protein product [Vitis vinifera]	0.982	0.879	0.589	0.0
255576870		762	cellulose synthase, putative [Ricinus co	0.957	0.925	0.615	0.0
356548660		736	PREDICTED: cellulose synthase-like prote	0.970	0.970	0.612	0.0
356535446		740	PREDICTED: cellulose synthase-like prote	0.975	0.970	0.584	0.0
429326514		723	cellulose synthase-like protein [Populus	0.967	0.984	0.583	0.0
224111026		723	predicted protein [Populus trichocarpa]	0.967	0.984	0.582	0.0
359477392		678	PREDICTED: cellulose synthase-like prote	0.903	0.980	0.564	0.0
255576868		711	cellulose synthase, putative [Ricinus co	0.947	0.980	0.569	0.0

>gi\|224111028\|ref\|XP_002315722.1\| predicted protein [Populus trichocarpa] gi\|222864762\|gb\|EEF01893.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

 Score =  957 bits (2474), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 490/813 (60%), Positives = 599/813 (73%), Gaps = 79/813 (9%)

Query: 1   MDSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQE--TRA-IPIILWLLV 57
           M+   PLH+CHV+  S+ INRLH LLH IAI FLIYYRAS+L QE  T+A +P++LWLLV
Sbjct: 46  MEISPPLHLCHVSKTSIFINRLHGLLHSIAIAFLIYYRASFLFQEPQTKATVPMLLWLLV 105

Query: 58  FASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNT 117
           F +ELLLSFIWL+G+AY W PVSRTVFPERLPEDDKLPAIDVFICT DP+KEP + VMNT
Sbjct: 106 FVAELLLSFIWLIGQAYHWHPVSRTVFPERLPEDDKLPAIDVFICTVDPDKEPTLDVMNT 165

Query: 118 VLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177
           VLSAMALDYP +KL++YLSDDGG+ +TLHGM+EA RFAK WLPFC++YGIKT CP+AYFS
Sbjct: 166 VLSAMALDYPAEKLNLYLSDDGGAAVTLHGMKEAWRFAKSWLPFCKKYGIKTRCPKAYFS 225

Query: 178 E-ADSDDYFGDS-EFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQ------NHSTIIE- 228
             +  DD FG S EFM +++ I+EKYE F+E V +  ED     ++      +H  +IE 
Sbjct: 226 ATSKDDDSFGSSNEFMADRQIIQEKYEDFKERVMRFREDFVLEETKSDITGRDHPALIEA 285

Query: 229 -------------------------------IIQDTSGENETIRQADLVEMPLLVYVSRE 257
                                          +IQD S E     +A+  EMPLLVYVSRE
Sbjct: 286 FLKKKELSPNWSLVIGKGKGGLTDAEHEADTVIQDNSNEEAPKDEAN--EMPLLVYVSRE 343

Query: 258 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSS 317
           K P H HHFK GALNVLLRVSGVISNSP+IL LDCDMYCNDPTSARQAMCF  DP  SSS
Sbjct: 344 KRPSHPHHFKAGALNVLLRVSGVISNSPHILVLDCDMYCNDPTSARQAMCFFFDPNISSS 403

Query: 318 LAFVQFPQKFHNFNEHDIYDGSLRSGY-------------RLQWPGMDGLKGPFLTGTGH 364
           LAFVQFPQ+FHN ++HDIYD  LRS +             ++ W G+DGLKGP L+GTG 
Sbjct: 404 LAFVQFPQRFHNISKHDIYDSQLRSTFGVRLVFIDFTLLNQILWQGLDGLKGPVLSGTGF 463

Query: 365 YIRRESLYGNFKHKGI---------------------DLAELKDTFGESNLFIKSLHQSY 403
           YI+R SLYG+   KG+                     +L EL+DTFG SN F+ S+ Q+Y
Sbjct: 464 YIKRNSLYGDSMQKGLVLSNPNHAASSQHALDDPKSCNLLELRDTFGLSNEFVNSIRQNY 523

Query: 404 EHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTS 463
           +   ++  ++S++L QET +LASC Y   TKWGEE  F Y SV+EDFFTGFILHCKGW S
Sbjct: 524 KANPMSYGSVSSMLLQETRILASCDYPRHTKWGEEACFLYHSVAEDFFTGFILHCKGWLS 583

Query: 464 TYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGE 523
            YL+PSRPQFLGTS T+LND+LIQGTRW+SGL++V +SRFCPL+YG  RMS L S+CY E
Sbjct: 584 VYLNPSRPQFLGTSITSLNDLLIQGTRWSSGLVEVGLSRFCPLIYGTLRMSFLESLCYAE 643

Query: 524 MSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTG 583
           +SLFPL YCLPLWCFAT+PQLCLLNGIPLYP+VSS FF+VFSFIFLSA+ KHL EV+ +G
Sbjct: 644 ISLFPLFYCLPLWCFATIPQLCLLNGIPLYPKVSSSFFIVFSFIFLSAVSKHLYEVLKSG 703

Query: 584 GSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQF 643
           GS+ T   EQR+WM+KSV++H YGS+DA+MK +G+R+ASFLPTNK  D E+ K Y+MG+F
Sbjct: 704 GSINTLVYEQRLWMMKSVSTHTYGSLDAVMKRIGVREASFLPTNKAADEEKFKLYQMGKF 763

Query: 644 DFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILIINFAIVEGM 703
           DF+TSS+ LVPMV+++ILN+A+ V GVIR+I  GNWD +  QV LS YIL++N AI+EGM
Sbjct: 764 DFKTSSMLLVPMVTVIILNMASFVLGVIRIIIAGNWDSMVVQVFLSSYILVMNSAIIEGM 823

Query: 704 IVRKDKGRISPSAILLSSVFFVTFLFFGSIILI 736
            +RKDKG I  S I+LS+VF + FL  GS  L+
Sbjct: 824 TIRKDKGCIPLSVIVLSTVFSIIFLCLGSFFLM 856

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|359477703\|ref\|XP_002280696.2\| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|297737188\|emb\|CBI26389.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255576870\|ref\|XP_002529321.1\| cellulose synthase, putative [Ricinus communis] gi\|223531245\|gb\|EEF33090.1\| cellulose synthase, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|356548660\|ref\|XP_003542718.1\| PREDICTED: cellulose synthase-like protein G2-like [Glycine max]	Back alignment and taxonomy information

>gi\|356535446\|ref\|XP_003536256.1\| PREDICTED: cellulose synthase-like protein G2-like [Glycine max]	Back alignment and taxonomy information

>gi\|429326514\|gb\|AFZ78597.1\| cellulose synthase-like protein [Populus tomentosa]	Back alignment and taxonomy information

>gi\|224111026\|ref\|XP_002315721.1\| predicted protein [Populus trichocarpa] gi\|222864761\|gb\|EEF01892.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|359477392\|ref\|XP_002280640.2\| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255576868\|ref\|XP_002529320.1\| cellulose synthase, putative [Ricinus communis] gi\|223531244\|gb\|EEF33089.1\| cellulose synthase, putative [Ricinus communis]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8VYR4	CSLG2_ARATH	2, ., 4, ., 1, ., -	0.364	0.9266	0.9445	yes	no
Q651X7	CSLE1_ORYSJ	2, ., 4, ., 1, ., -	0.3679	0.9307	0.9294	yes	no
Q651X6	CSLE6_ORYSJ	2, ., 4, ., 1, ., -	0.3772	0.9320	0.9423	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	0.691
4th Layer	2.4.1.12	LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pg.C_LG_X0687	hypothetical protein (857 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
		Sorry, there are no predicted associations at the current settings.

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		736
PLN02893		734	PLN02893, PLN02893, Cellulose synthase-like protei	0.0
PLN02189		1040	PLN02189, PLN02189, cellulose synthase	1e-135
PLN02190		756	PLN02190, PLN02190, cellulose synthase-like protei	1e-125
PLN02436		1094	PLN02436, PLN02436, cellulose synthase A	5e-77
PLN02915		1044	PLN02915, PLN02915, cellulose synthase A [UDP-form	6e-76
PLN02195		977	PLN02195, PLN02195, cellulose synthase A	1e-75
PLN02400		1085	PLN02400, PLN02400, cellulose synthase	4e-75
pfam03552		716	pfam03552, Cellulose_synt, Cellulose synthase	1e-74
PLN02638		1079	PLN02638, PLN02638, cellulose synthase A (UDP-form	2e-74
PLN02248		1135	PLN02248, PLN02248, cellulose synthase-like protei	9e-60
pfam03552		716	pfam03552, Cellulose_synt, Cellulose synthase	4e-53
PLN02915		1044	PLN02915, PLN02915, cellulose synthase A [UDP-form	6e-53
PLN02195		977	PLN02195, PLN02195, cellulose synthase A	7e-52
PLN02436		1094	PLN02436, PLN02436, cellulose synthase A	4e-49
PLN02638		1079	PLN02638, PLN02638, cellulose synthase A (UDP-form	8e-49
PLN02400		1085	PLN02400, PLN02400, cellulose synthase	7e-48
PLN02248		1135	PLN02248, PLN02248, cellulose synthase-like protei	3e-33
TIGR03030		713	TIGR03030, CelA, cellulose synthase catalytic subu	2e-13
cd06421		234	cd06421, CESA_CelA_like, CESA_CelA_like are involv	2e-10
cd06421		234	cd06421, CESA_CelA_like, CESA_CelA_like are involv	8e-10
cd06421		234	cd06421, CESA_CelA_like, CESA_CelA_like are involv	5e-09
PRK11498		852	PRK11498, bcsA, cellulose synthase catalytic subun	1e-07
TIGR03030		713	TIGR03030, CelA, cellulose synthase catalytic subu	3e-07
COG1215		439	COG1215, COG1215, Glycosyltransferases, probably i	2e-06
PRK11498		852	PRK11498, bcsA, cellulose synthase catalytic subun	2e-04
pfam13632		194	pfam13632, Glyco_trans_2_3, Glycosyl transferase f	0.004

>gnl\|CDD\|215483 PLN02893, PLN02893, Cellulose synthase-like protein	Back alignment and domain information

 Score =  633 bits (1634), Expect = 0.0
 Identities = 293/761 (38%), Positives = 440/761 (57%), Gaps = 71/761 (9%)

Query: 6   PLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLS 65
           PLH CH      I NR+ A+++  AI  L+Y+    LL  T     ++ LL+  ++++L+
Sbjct: 13  PLHTCHPMR-RTIANRVFAVVYSCAILALLYHHVIALLHSTT---TLITLLLLLADIVLA 68

Query: 66  FIWLLGRAYLWRPVSRTVFPERL----PEDDKLPAIDVFICTADPEKEPAIGVMNTVLSA 121
           F+W   +A+   PV R VF E L     E D  P +DVFICTADP KEP +GV+NT LS 
Sbjct: 69  FMWATTQAFRMCPVHRRVFIEHLEHYAKESD-YPGLDVFICTADPYKEPPMGVVNTALSV 127

Query: 122 MALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADS 181
           MA DYP +KL VY+SDDGGS +TL    EA +FA  WLPFC++  I   CP+AYF  ++S
Sbjct: 128 MAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHWLPFCKKNKIVERCPEAYF-SSNS 186

Query: 182 DDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNS--------------------Q 221
             +  ++E      +IK  YE  +  V   VE G+                        Q
Sbjct: 187 HSWSPETE------QIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQ 240

Query: 222 NHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVI 281
           +H T+I+++ + SG+++ I       MP L+YVSREKS    HHFK GALN LLRVS  +
Sbjct: 241 DHPTVIQVLLE-SGKDKDITGHT---MPNLIYVSREKSKNSPHHFKAGALNTLLRVSATM 296

Query: 282 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLR 341
           +N+P IL LDCDMY NDP +  +A+C+ LDP     L +VQFPQ FH  N++DIY G L+
Sbjct: 297 TNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELK 356

Query: 342 SGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQ 401
             +++   GMDGL GP   GTG + RR   YG                G S+L       
Sbjct: 357 RLFQINMIGMDGLAGPNYVGTGCFFRRRVFYG----------------GPSSLI------ 394

Query: 402 SYEHKNVNGENLSNVLQQETEVLAS------CSYEHQTKWGEEVGFSYQSVSEDFFTGFI 455
             E   +N ++L +   +  EVLA       C+YE+QT WG ++GF Y S+ ED++TG+ 
Sbjct: 395 LPEIPELNPDHLVDKSIKSQEVLALAHHVAGCNYENQTNWGSKMGFRYGSLVEDYYTGYR 454

Query: 456 LHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGPSRMSL 515
           L C+GW S + +P RP FLG S  NL+DVL Q  RW+ GL++V+ S++ P+ +G   + L
Sbjct: 455 LQCEGWKSIFCNPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGL 514

Query: 516 LLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFLSAICKH 575
           L+ + Y   + +P ++ +P+  +A LPQL LLNG+ ++P+ S P+F ++ F+FL A  + 
Sbjct: 515 LMGLGYAHYAFWP-IWSIPITIYAFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQD 573

Query: 576 LQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQV 635
           L + + +GG++  W N+QR+WMI+ ++S  +G ++ ++K LG+    F  T+KV+D EQ 
Sbjct: 574 LLDFLLSGGTIQRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVTSKVVDEEQS 633

Query: 636 KRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVGNWDKLFAQVLLSLYILII 695
           KRYE G F+F  SS   +P+ +  I+N+ + + G+ ++    N + LF Q+ L+ + ++ 
Sbjct: 634 KRYEQGIFEFGVSSPMFLPLTTAAIINLVSFLWGIAQIFRQRNLEGLFLQMFLAGFAVVN 693

Query: 696 NFAIVEGMIVRKDKGRISPSAILLSSVFFVTFLFF-GSIIL 735
            + I E M++R D G++ P  I L S+     L+   S   
Sbjct: 694 CWPIYEAMVLRTDDGKL-PVKITLISIVLAWALYLASSFAF 733

Length = 734

>gnl\|CDD\|215121 PLN02189, PLN02189, cellulose synthase	Back alignment and domain information

>gnl\|CDD\|215122 PLN02190, PLN02190, cellulose synthase-like protein	Back alignment and domain information

>gnl\|CDD\|215239 PLN02436, PLN02436, cellulose synthase A	Back alignment and domain information

>gnl\|CDD\|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit	Back alignment and domain information

>gnl\|CDD\|215124 PLN02195, PLN02195, cellulose synthase A	Back alignment and domain information

>gnl\|CDD\|215224 PLN02400, PLN02400, cellulose synthase	Back alignment and domain information

>gnl\|CDD\|217611 pfam03552, Cellulose_synt, Cellulose synthase	Back alignment and domain information

>gnl\|CDD\|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit	Back alignment and domain information

>gnl\|CDD\|215138 PLN02248, PLN02248, cellulose synthase-like protein	Back alignment and domain information

>gnl\|CDD\|217611 pfam03552, Cellulose_synt, Cellulose synthase	Back alignment and domain information

>gnl\|CDD\|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit	Back alignment and domain information

>gnl\|CDD\|215124 PLN02195, PLN02195, cellulose synthase A	Back alignment and domain information

>gnl\|CDD\|215239 PLN02436, PLN02436, cellulose synthase A	Back alignment and domain information

>gnl\|CDD\|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit	Back alignment and domain information

>gnl\|CDD\|215224 PLN02400, PLN02400, cellulose synthase	Back alignment and domain information

>gnl\|CDD\|215138 PLN02248, PLN02248, cellulose synthase-like protein	Back alignment and domain information

>gnl\|CDD\|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming)	Back alignment and domain information

>gnl\|CDD\|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>gnl\|CDD\|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>gnl\|CDD\|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>gnl\|CDD\|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional	Back alignment and domain information

>gnl\|CDD\|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming)	Back alignment and domain information

>gnl\|CDD\|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>gnl\|CDD\|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional	Back alignment and domain information

>gnl\|CDD\|222273 pfam13632, Glyco_trans_2_3, Glycosyl transferase family group 2	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		736
PLN02436		1094	cellulose synthase A	100.0
PLN02400		1085	cellulose synthase	100.0
PLN02638		1079	cellulose synthase A (UDP-forming), catalytic subu	100.0
PLN02195		977	cellulose synthase A	100.0
PLN02189		1040	cellulose synthase	100.0
PLN02915		1044	cellulose synthase A [UDP-forming], catalytic subu	100.0
PLN02190		756	cellulose synthase-like protein	100.0
PLN02248		1135	cellulose synthase-like protein	100.0
PLN02893		734	Cellulose synthase-like protein	100.0
PF03552		720	Cellulose_synt: Cellulose synthase; InterPro: IPR0	100.0
PRK11498		852	bcsA cellulose synthase catalytic subunit; Provisi	100.0
TIGR03030		713	CelA cellulose synthase catalytic subunit (UDP-for	100.0
PRK05454		691	glucosyltransferase MdoH; Provisional	100.0
PRK14583		444	hmsR N-glycosyltransferase; Provisional	100.0
cd04191		254	Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon	100.0
COG1215		439	Glycosyltransferases, probably involved in cell wa	100.0
PRK11204		420	N-glycosyltransferase; Provisional	100.0
TIGR03111		439	glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0	100.0
PRK14716		504	bacteriophage N4 adsorption protein B; Provisional	100.0
cd06437		232	CESA_CaSu_A2 Cellulose synthase catalytic subunit	99.97
cd06421		234	CESA_CelA_like CESA_CelA_like are involved in the	99.97
PRK11234		727	nfrB bacteriophage N4 adsorption protein B; Provis	99.97
cd06427		241	CESA_like_2 CESA_like_2 is a member of the cellulo	99.97
cd06435		236	CESA_NdvC_like NdvC_like proteins in this family a	99.96
PF13641		228	Glyco_tranf_2_3: Glycosyltransferase like family 2	99.95
TIGR03472		373	HpnI hopanoid biosynthesis associated glycosyl tra	99.95
cd04190		244	Chitin_synth_C C-terminal domain of Chitin Synthas	99.94
PRK15489		703	nfrB bacteriophage N4 adsorption protein B; Provis	99.93
cd02520		196	Glucosylceramide_synthase Glucosylceramide synthas	99.93
cd04192		229	GT_2_like_e Subfamily of Glycosyltransferase Famil	99.93
cd06434		235	GT2_HAS Hyaluronan synthases catalyze polymerizati	99.92
cd06439		251	CESA_like_1 CESA_like_1 is a member of the cellulo	99.92
TIGR03469		384	HonB hopene-associated glycosyltransferase HpnB. T	99.91
COG2943		736	MdoH Membrane glycosyltransferase [Cell envelope b	99.91
cd02525		249	Succinoglycan_BP_ExoA ExoA is involved in the bios	99.87
cd06438		183	EpsO_like EpsO protein participates in the methano	99.8
cd06436		191	GlcNAc-1-P_transferase N-acetyl-glucosamine transf	99.8
PF13632		193	Glyco_trans_2_3: Glycosyl transferase family group	99.75
cd04184		202	GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot	99.75
cd04195		201	GT2_AmsE_like GT2_AmsE_like is involved in exopoly	99.71
cd02510		299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	99.68
cd06433		202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	99.67
PLN02726		243	dolichyl-phosphate beta-D-mannosyltransferase	99.66
cd04196		214	GT_2_like_d Subfamily of Glycosyltransferase Famil	99.65
cd02522		221	GT_2_like_a GT_2_like_a represents a glycosyltrans	99.61
cd06913		219	beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran	99.61
cd06442		224	DPM1_like DPM1_like represents putative enzymes si	99.61
cd06420		182	GT2_Chondriotin_Pol_N N-terminal domain of Chondro	99.59
PRK10073		328	putative glycosyl transferase; Provisional	99.59
cd04186		166	GT_2_like_c Subfamily of Glycosyltransferase Famil	99.59
PF13506		175	Glyco_transf_21: Glycosyl transferase family 21	99.57
PF03142		527	Chitin_synth_2: Chitin synthase; InterPro: IPR0048	99.56
cd04185		202	GT_2_like_b Subfamily of Glycosyltransferase Famil	99.54
cd06423		180	CESA_like CESA_like is the cellulose synthase supe	99.53
cd04188		211	DPG_synthase DPG_synthase is involved in protein N	99.51
cd02526		237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	99.51
PRK10018		279	putative glycosyl transferase; Provisional	99.5
PRK10063		248	putative glycosyl transferase; Provisional	99.5
PF00535		169	Glycos_transf_2: Glycosyl transferase family 2; In	99.48
PTZ00260		333	dolichyl-phosphate beta-glucosyltransferase; Provi	99.42
cd04179		185	DPM_DPG-synthase_like DPM_DPG-synthase_like is a m	99.42
TIGR01556		281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	99.31
PRK13915		306	putative glucosyl-3-phosphoglycerate synthase; Pro	99.28
cd04187		181	DPM1_like_bac Bacterial DPM1_like enzymes are rela	99.27
PRK10714		325	undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi	99.19
KOG2571		862	consensus Chitin synthase/hyaluronan synthase (gly	99.17
cd00761		156	Glyco_tranf_GTA_type Glycosyltransferase family A	99.17
PF10111		281	Glyco_tranf_2_2: Glycosyltransferase like family 2	99.13
COG1216		305	Predicted glycosyltransferases [General function p	99.11
COG0463		291	WcaA Glycosyltransferases involved in cell wall bi	98.86
cd02511		229	Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4	98.82
KOG2547		431	consensus Ceramide glucosyltransferase [Lipid tran	98.6
KOG2978		238	consensus Dolichol-phosphate mannosyltransferase [	98.2
KOG2977		323	consensus Glycosyltransferase [General function pr	97.93
cd02514		334	GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es	97.85
KOG3737		603	consensus Predicted polypeptide N-acetylgalactosam	96.2
PF02364		817	Glucan_synthase: 1,3-beta-glucan synthase componen	95.47
PF13704		97	Glyco_tranf_2_4: Glycosyl transferase family 2	95.36
KOG3738		559	consensus Predicted polypeptide N-acetylgalactosam	94.86
KOG3736		578	consensus Polypeptide N-acetylgalactosaminyltransf	94.43
PF13712		217	Glyco_tranf_2_5: Glycosyltransferase like family;	93.03
PF03071		434	GNT-I: GNT-I family; InterPro: IPR004139 The biosy	91.17
PRK14503		393	mannosyl-3-phosphoglycerate synthase; Provisional	89.06
TIGR02460		381	osmo_MPGsynth mannosyl-3-phosphoglycerate synthase	88.57
PF01644		163	Chitin_synth_1: Chitin synthase; InterPro: IPR0048	87.26
PF09488		381	Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthas	86.13
PF03452		269	Anp1: Anp1; InterPro: IPR005109 The members of thi	83.59
KOG0916		1679	consensus 1,3-beta-glucan synthase/callose synthas	82.1
PRK14502		694	bifunctional mannosyl-3-phosphoglycerate synthase/	81.07

>PLN02436 cellulose synthase A	Back alignment and domain information

Probab=100.00  E-value=1.6e-173  Score=1498.54  Aligned_cols=712  Identities=33%  Similarity=0.646  Sum_probs=656.0

Q ss_pred             CC-CCCceEeeecCchh-HHHHHHHHHHHHHHHHHHHHhhhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHhhhheeec
Q 004692            2 DS-PLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPV   79 (736)
Q Consensus         2 ~~-~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~   79 (736)
                      |+ .+|||++++.++.+ +.||+++++++++++++|+||+++..    ..+.|+|+++++||+||+|+|+|+|+.||+|+
T Consensus       267 ~~~~~pL~~~~~i~~~~~~pyR~~~~~rlv~l~~fl~yRi~~~~----~~a~~~Wl~s~~cE~WFaf~Wll~Q~~Kw~Pv  342 (1094)
T PLN02436        267 DEGRQPLSRKLPIPSSKINPYRMIIILRLVILGLFFHYRILHPV----NDAYGLWLTSVICEIWFAVSWILDQFPKWYPI  342 (1094)
T ss_pred             cccCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccC----cccHHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence            44 78899999998874 56999999999999999999999843    23689999999999999999999999999999


Q ss_pred             cccCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHH
Q 004692           80 SRTVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREAC  152 (736)
Q Consensus        80 ~r~~~~~~l~~-------~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~  152 (736)
                      +|.+++++|.+       ++++|.|||||+|+||++|||.++.|||+|+||.|||.|||+|||+|||++.+|+++|.||+
T Consensus       343 ~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa  422 (1094)
T PLN02436        343 ERETYLDRLSLRYEKEGKPSELASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETS  422 (1094)
T ss_pred             cceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEecCCchHHHHHHHHHHH
Confidence            99999998863       24699999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhhhhhhhhcCCccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhc-CC--------------
Q 004692          153 RFAKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVED-GE--------------  216 (736)
Q Consensus       153 ~fa~~wvpfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~-g~--------------  216 (736)
                      +|||+||||||||+||||+||+||+.+ ++.+++.+++|++||++||++|||||+|||.+.+. +.              
T Consensus       423 ~FAk~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mKreYEe~K~RIe~l~~~~~~vp~~~~~m~dgt~W  502 (1094)
T PLN02436        423 EFARKWVPFCKKFSIEPRAPEWYFSQKMDYLKNKVHPAFVRERRAMKREYEEFKVKINALVATAQKVPEDGWTMQDGTPW  502 (1094)
T ss_pred             HHHHhhcccccccCCCcCCHHHHhhccCCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHhhcccCchhhhhhccCccC
Confidence            999999999999999999999999988 55677788999999999999999999999988653 11              


Q ss_pred             -CCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCC
Q 004692          217 -YGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMY  295 (736)
Q Consensus       217 -~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~  295 (736)
                       +.+++|||+||||+++++++    .|.++.++|+|+||+||||||++||+||||||+++|+|++|||+|||+|+||||+
T Consensus       503 ~g~~~~dHp~IIqVll~~~~~----~d~~g~~LP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaP~ILNLDCDmY  578 (1094)
T PLN02436        503 PGNNVRDHPGMIQVFLGHSGV----RDVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLIRVSAVLSNAPYLLNVDCDHY  578 (1094)
T ss_pred             CCCCCCCCccceEEEecCCCC----cccccccCceEEEEecccCCCCCcchhhhhhhhhhhhheeecCCceEEecccccc
Confidence             45789999999999998764    2557788999999999999999999999999999999999999999999999999


Q ss_pred             CCchHHHHHHHHhhcCCCCCCceEEEccCceeccCCCCchhhhhhhhhhhhhHhhhhhcCCccccccccceehhhccC-C
Q 004692          296 CNDPTSARQAMCFHLDPKTSSSLAFVQFPQKFHNFNEHDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYG-N  374 (736)
Q Consensus       296 ~~~p~~L~~~v~~f~D~~~~~~vg~VQ~pq~f~n~~~~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~-~  374 (736)
                      +|||++++++||||+||+.++++||||+||+|+|.+++|+|+|++++||++.++|+||+|||+|+||||+|||+|||| .
T Consensus       579 iNns~a~r~AMCfllD~~~g~~~afVQFPQrF~gi~k~D~Y~n~~~vffdi~~~GlDGlqGP~YvGTGC~frR~aLYG~~  658 (1094)
T PLN02436        579 INNSKALREAMCFMMDPQSGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGIQGPIYVGTGCVFRRQALYGYD  658 (1094)
T ss_pred             cCchHHHHHhhhhhcCCccCCeeEEEcCCcccCCCCCCCcccccceEeeeccccccccCCCccccccCceeeeeeeeccC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999999 5


Q ss_pred             ccccc----------------------------------------------------------------cchHhhHhhhc
Q 004692          375 FKHKG----------------------------------------------------------------IDLAELKDTFG  390 (736)
Q Consensus       375 ~~~~~----------------------------------------------------------------~d~~~~~~~~~  390 (736)
                      |+...                                                                .+...+.++||
T Consensus       659 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~FG  738 (1094)
T PLN02436        659 APKKKKPPGKTCNCWPKWCCLCCGSRKKKKKKKSKEKKKKKNREASKQIHALENIEEGIEGSNNEKSSETPQLKLEKKFG  738 (1094)
T ss_pred             CccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHhhhc
Confidence            43100                                                                00123457899


Q ss_pred             CchhHHhhhhhhccccccCCccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCC
Q 004692          391 ESNLFIKSLHQSYEHKNVNGENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSR  470 (736)
Q Consensus       391 ~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~  470 (736)
                      +|.+|++|+..+..+.  +....++++++||++|+||+||++|+||+++||.|+|+|||+.||++||++||||+||+|++
T Consensus       739 ~S~~fi~S~~~~~~~~--~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGwiYGSvTEDv~TG~rLH~rGWrSvY~~P~r  816 (1094)
T PLN02436        739 QSPVFVASTLLENGGV--PRNASPASLLREAIQVISCGYEDKTEWGKEIGWIYGSVTEDILTGFKMHCHGWRSVYCIPKR  816 (1094)
T ss_pred             ccHHHHHHHHHhhcCC--CCCCCcHHHHHHHHHhhcCCCcccChhhHhhCeeccceecHHHHHHHHHcCCCceEeCCCCc
Confidence            9999999998887432  23335678999999999999999999999999999999999999999999999999998878


Q ss_pred             CeeEeccCcCHHHHHHhhHHHhcccchhhhhhcCCcccCC-CCCchhHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHhcC
Q 004692          471 PQFLGTSTTNLNDVLIQGTRWASGLIDVSISRFCPLLYGP-SRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNG  549 (736)
Q Consensus       471 ~~~~g~aP~tl~~~l~Qr~RWa~G~~qi~~~~~~p~~~~~-~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g  549 (736)
                      ++|.|+||+|+.+++.||+|||+|++||+++|+||+++|. ++|++.||++|+++++|| +.++|.++|+++|++||++|
T Consensus       817 ~AF~GlAP~~L~d~L~Qr~RWA~G~lQIffsr~nPl~~g~~~~L~l~QRL~Yl~~~ly~-l~Slp~liY~~lP~l~LL~G  895 (1094)
T PLN02436        817 PAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPIWYGYGGGLKWLERFSYINSVVYP-WTSIPLIVYCTLPAICLLTG  895 (1094)
T ss_pred             hhhcCcCCCCHHHHHHHHHHHhhcceeeeeccCCcchhcccccCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcC
Confidence            8999999999999999999999999999999999999763 589999999999999999 99999999999999999999


Q ss_pred             CCcccccChhhHHHHHHHHHHHHHHHHHHHHHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCc
Q 004692          550 IPLYPEVSSPFFMVFSFIFLSAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKV  629 (736)
Q Consensus       550 ~~~~~~~~~~~~~~~~~l~i~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~  629 (736)
                      ++++|.++.+++++|+++|+++++++++|++|+|.++++|||+||+|+|.++++++++++++++++|++++++|.||+|.
T Consensus       896 ~~i~P~vs~~~~~~fi~lfls~~~~~lLE~~wsG~si~~WWrnQq~w~I~~tSa~Lfavl~~iLKvLggs~~~F~VTsK~  975 (1094)
T PLN02436        896 KFIVPEISNYASILFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVNTNFTVTSKA  975 (1094)
T ss_pred             CeecCccchHHHHHHHHHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcccceecccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cchhhhhhccccceeeeccchhHHHHHHHHHHHHHHHHHHHHHHhhcC--CchHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 004692          630 LDNEQVKRYEMGQFDFQTSSVFLVPMVSLMILNVAALVCGVIRMIAVG--NWDKLFAQVLLSLYILIINFAIVEGMIVRK  707 (736)
Q Consensus       630 ~~~~~~~~y~~~~f~f~~~s~~~~P~~~l~ll~l~aiv~gi~r~~~~~--~~~~~~~~~~~~~~~v~~l~p~~~al~~r~  707 (736)
                      .+.+.    ..++|+|+ ++++++|+++++++|++|+++|+++++.+|  .|+.+++++|+++|++++++||++||++| 
T Consensus       976 ~d~~~----~a~ly~f~-~S~L~iP~tti~ilNlvaiv~Gi~~~i~~g~~~~g~l~~~l~~~~wvvv~lyPf~kgL~gr- 1049 (1094)
T PLN02436        976 ADDGE----FSELYLFK-WTSLLIPPTTLLIINIIGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGK- 1049 (1094)
T ss_pred             ccccc----ccceeeec-ceeHhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHhcc-
Confidence            76432    12678998 899999999999999999999999998755  68899999999999999999999999954 


Q ss_pred             CCCCCChhHHHHHHHHHHHHHHhh
Q 004692          708 DKGRISPSAILLSSVFFVTFLFFG  731 (736)
Q Consensus       708 ~~~~~p~~~~~~~~~~~~~~~~~~  731 (736)
                       ++++|+++++||++||++|+++-
T Consensus      1050 -~~r~P~~v~v~s~lla~~~~l~~ 1072 (1094)
T PLN02436       1050 -QDRMPTIILVWSILLASILTLLW 1072 (1094)
T ss_pred             -CCCCCeeehHHHHHHHHHHHHHH
Confidence             55999999999999999999863

>PLN02400 cellulose synthase	Back alignment and domain information

>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit	Back alignment and domain information

>PLN02195 cellulose synthase A	Back alignment and domain information

>PLN02189 cellulose synthase	Back alignment and domain information

>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit	Back alignment and domain information

>PLN02190 cellulose synthase-like protein	Back alignment and domain information

>PLN02248 cellulose synthase-like protein	Back alignment and domain information

>PLN02893 Cellulose synthase-like protein	Back alignment and domain information

>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals	Back alignment and domain information

>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional	Back alignment and domain information

>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming)	Back alignment and domain information

>PRK05454 glucosyltransferase MdoH; Provisional	Back alignment and domain information

>PRK14583 hmsR N-glycosyltransferase; Provisional	Back alignment and domain information

>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan	Back alignment and domain information

>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>PRK11204 N-glycosyltransferase; Provisional	Back alignment and domain information

>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111	Back alignment and domain information

>PRK14716 bacteriophage N4 adsorption protein B; Provisional	Back alignment and domain information

>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex	Back alignment and domain information

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose	Back alignment and domain information

>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional	Back alignment and domain information

>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily	Back alignment and domain information

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase	Back alignment and domain information

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A	Back alignment and domain information

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI	Back alignment and domain information

>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin	Back alignment and domain information

>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional	Back alignment and domain information

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis	Back alignment and domain information

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan	Back alignment and domain information

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily	Back alignment and domain information

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB	Back alignment and domain information

>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan	Back alignment and domain information

>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis	Back alignment and domain information

>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine	Back alignment and domain information

>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2	Back alignment and domain information

>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis	Back alignment and domain information

>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis	Back alignment and domain information

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans	Back alignment and domain information

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis	Back alignment and domain information

>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase	Back alignment and domain information

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function	Back alignment and domain information

>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine	Back alignment and domain information

>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1	Back alignment and domain information

>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase	Back alignment and domain information

>PRK10073 putative glycosyl transferase; Provisional	Back alignment and domain information

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>PF13506 Glyco_transf_21: Glycosyl transferase family 21	Back alignment and domain information

>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2	Back alignment and domain information

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function	Back alignment and domain information

>cd06423 CESA_like CESA_like is the cellulose synthase superfamily	Back alignment and domain information

>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation	Back alignment and domain information

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase	Back alignment and domain information

>PRK10018 putative glycosyl transferase; Provisional	Back alignment and domain information

>PRK10063 putative glycosyl transferase; Provisional	Back alignment and domain information

>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional	Back alignment and domain information

>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	Back alignment and domain information

>TIGR01556 rhamnosyltran L-rhamnosyltransferase	Back alignment and domain information

>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional	Back alignment and domain information

>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1	Back alignment and domain information

>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional	Back alignment and domain information

>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold	Back alignment and domain information

>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ]	Back alignment and domain information

>COG1216 Predicted glycosyltransferases [General function prediction only]	Back alignment and domain information

>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]	Back alignment and domain information

>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide	Back alignment and domain information

>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only]	Back alignment and domain information

>KOG2977 consensus Glycosyltransferase [General function prediction only]	Back alignment and domain information

>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides	Back alignment and domain information

>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2	Back alignment and domain information

>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones]	Back alignment and domain information

>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B	Back alignment and domain information

>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases	Back alignment and domain information

>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional	Back alignment and domain information

>TIGR02460 osmo_MPGsynth mannosyl-3-phosphoglycerate synthase	Back alignment and domain information

>PF01644 Chitin_synth_1: Chitin synthase; InterPro: IPR004834 This region is found commonly in chitin synthases classes I, II and III 2	Back alignment and domain information

>PF09488 Osmo_MPGsynth: Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth); InterPro: IPR012812 This family consists of examples of mannosyl-3-phosphoglycerate synthase (MPGS), which together with mannosyl-3-phosphoglycerate phosphatase (MPGP), comprises a two-step pathway for mannosylglycerate biosynthesis	Back alignment and domain information

>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function	Back alignment and domain information

>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis]	Back alignment and domain information

>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		736
4hg6_A		802	Structure Of A Cellulose Synthase - Cellulose Trans		2e-04

>pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802

Back alignment and structure

Iteration: 1

Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 12/131 (9%) Query: 426 SCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVL 485 S + + E GF+ ++++ED T +H +GW S Y+D R G + Sbjct: 320 SAAVLRRRALDEAGGFAGETITEDAETALEIHSRGWKSLYID--RAMIAGLQPETFASFI 377 Query: 486 IQGTRWASGLIDVSISRFCPLLYGPSRMSLLLSMCY-GEMS--LFPLLYCLPLWCFATLP 542 Q RWA+G++ + + + G + + +CY MS FPL+ + F P Sbjct: 378 QQRGRWATGMMQMLLLKNPLFRRG---LGIAQRLCYLNSMSFWFFPLVRMM----FLVAP 430 Query: 543 QLCLLNGIPLY 553 + L GI ++ Sbjct: 431 LIYLFFGIEIF 441

PyMOL of 4hg6

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Alignment Graph	Length	Definition	E-value
Query		736
1vt4_I		1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-06

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221	Back alignment and structure

 Score = 48.3 bits (114), Expect = 9e-06
 Identities = 84/606 (13%), Positives = 167/606 (27%), Gaps = 184/606 (30%)

Query: 115 MNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQA 174
             ++LS   +D      H+ +S D                  W L        + +  Q 
Sbjct: 42  PKSILSKEEID------HIIMSKD---------AVSGTLRLFWTL---LSKQEEMV--QK 81

Query: 175 YFSEADSDDY-FGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDT 233
           +  E    +Y F  S    E+++      M+ E   +   D +   ++ + + ++     
Sbjct: 82  FVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV-FAKYNVSRLQPY--- 137

Query: 234 SGENETIRQADLVEMPLLVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCD 293
                 +RQA L+E+     V        +    G     +     V  +      +D  
Sbjct: 138 ----LKLRQA-LLELRPAKNVL-------IDGVLGSGKTWV--ALDVCLSYKVQCKMDFK 183

Query: 294 MY------CNDPTS---ARQAMCFHLDPK-TSSSLAFVQFPQKFHNFNEH---------- 333
           ++      CN P +     Q + + +DP  TS S        + H+              
Sbjct: 184 IFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY 243

Query: 334 --------DIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLY---GNFKHKGIDL 382
                   ++ +          W   + L    L  T    R + +           I L
Sbjct: 244 ENCLLVLLNVQNAKA-------WNAFN-LSCKILLTT----RFKQVTDFLSAATTTHISL 291

Query: 383 AELKDTFGES---NLFIKSLHQSYEH------------------------------KNVN 409
                T       +L +K L    +                               K+VN
Sbjct: 292 DHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVN 351

Query: 410 GENLSNVLQQETEVLASCSYEHQTK-------------------WGEEVGFSYQSVSEDF 450
            + L+ +++    VL    Y                        W + +      V    
Sbjct: 352 CDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKL 411

Query: 451 FTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGTRWASGLID-VSISR-FCPLLY 508
               ++  +   ST   PS   +L       N+  +  +     ++D  +I + F     
Sbjct: 412 HKYSLVEKQPKESTISIPS--IYLELKVKLENEYALHRS-----IVDHYNIPKTFDSDDL 464

Query: 509 GPSRMS----------LLLSMCYGEMSLFPLLY------------CLPLWCFATLPQLCL 546
            P  +           L        M+LF +++                W  A+   L  
Sbjct: 465 IPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWN-ASGSILNT 523

Query: 547 LNGIPLYPE---VSSPFF--MVFSFI-FLSAI------CKH---LQEVIST-GGSVY--T 588
           L  +  Y      + P +  +V + + FL  I       K+   L+  +     +++   
Sbjct: 524 LQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEA 583

Query: 589 WRNEQR 594
            +  QR
Sbjct: 584 HKQVQR 589

PyMOL of 1vt4

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Alignment Graph	Length	Definition	Probability
Query		736
4hg6_A		802	Cellulose synthase subunit A; membrane translocati	100.0
1xhb_A		472	Polypeptide N-acetylgalactosaminyltransferase 1; g	99.78
2z86_A		625	Chondroitin synthase; GT-A, glycosyltransferase A,	99.78
3bcv_A		240	Putative glycosyltransferase protein; protein stru	99.77
1qg8_A		255	Protein (spore coat polysaccharide biosynthesis P	99.74
2d7i_A		570	Polypeptide N-acetylgalactosaminyltransferase 10;	99.73
2ffu_A		501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	99.71
2z86_A		625	Chondroitin synthase; GT-A, glycosyltransferase A,	99.69
3ckj_A		329	Putative uncharacterized protein; mycobacteria, un	99.62
3l7i_A		729	Teichoic acid biosynthesis protein F; GT-B fold, m	99.49
4fix_A		657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	99.49
3f1y_A		387	Mannosyl-3-phosphoglycerate synthase; GT-A type gl	99.4
2fy7_A		287	Beta-1,4-galactosyltransferase 1; M339H mutant, AP	99.38
2nxv_A		249	ATP synthase subunits region ORF 6; majastridin, A	99.14
2bo4_A		397	Mannosylglycerate synthase; catalysis, glycosyltra	98.75
2zu9_A		394	Mannosyl-3-phosphoglycerate synthase; GT-A fold, g	98.07
2wvl_A		391	Mannosyl-3-phosphoglycerate synthase; GT-A fold, t	98.05
1fo8_A		343	Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl	97.65
3lw6_A		287	FI08434P, beta-4-galactosyltransferase 7; protein-	83.68

>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}	Back alignment and structure

Probab=100.00  E-value=1e-55  Score=529.55  Aligned_cols=509  Identities=20%  Similarity=0.294  Sum_probs=386.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhhhcccCC-CchhHHHHHHHHHHHHHHHHHHHHHhhhheeeccccCCCCCCCCCCCCCce
Q 004692           19 INRLHALLHCIAIGFLIYYRASYLLQET-RAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAI   97 (736)
Q Consensus        19 ~~r~~~~~~~~~~~~yl~wR~~~~l~~~-~~~~~~~w~~~~~~E~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~P~V   97 (736)
                      +..+++.+.+++.+.|++||++.+++.. .....+++++++++|++..+.|+++.+..++|..|...++.  .+++.|+|
T Consensus        65 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~--~~~~~P~V  142 (802)
T 4hg6_A           65 PRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL--QPEELPTV  142 (802)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC--CTTTCCCE
T ss_pred             hHHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC--CccCCCcE
Confidence            3444455555567789999999999854 35567888999999999999999999999999888765543  35678999


Q ss_pred             EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccCCcccccc
Q 004692           98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS  177 (736)
Q Consensus        98 dV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r~p~~yf~  177 (736)
                      +|+|||   |||+++++++|+.|+++++||+++++|+|+|||++|.|.+.                              
T Consensus       143 SViIPt---yNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~------------------------------  189 (802)
T 4hg6_A          143 DILVPS---YNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS------------------------------  189 (802)
T ss_dssp             EEEEEC---TTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC------------------------------
T ss_pred             EEEEEE---CCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc------------------------------
Confidence            999999   99998888999999999999999999999999999977531                              


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCeEEEEecc
Q 004692          178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPLLVYVSRE  257 (736)
Q Consensus       178 ~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~l~yv~R~  257 (736)
                              .+++.+++..+..+..+++..+                                         .++.|+.|+
T Consensus       190 --------~d~~i~~~~~~~~~~l~~~~~~-----------------------------------------~~v~~i~~~  220 (802)
T 4hg6_A          190 --------PDPELAQKAQERRRELQQLCRE-----------------------------------------LGVVYSTRE  220 (802)
T ss_dssp             --------SSHHHHHHHHHHHHHHHHHHHH-----------------------------------------HTCEEEECS
T ss_pred             --------CCHHHHHHHHhhhHHHHHHHHh-----------------------------------------cCcEEEEec
Confidence                    1122222221111111111111                                         025788887


Q ss_pred             CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhh-cCCCCCCceEEEccCceeccCCC----
Q 004692          258 KSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFH-LDPKTSSSLAFVQFPQKFHNFNE----  332 (736)
Q Consensus       258 k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f-~D~~~~~~vg~VQ~pq~f~n~~~----  332 (736)
                      ++    +++|+||+|.|++.    ++||||+++|||++++ ||++++++.+| .||+    +++||+++.+.|.+.    
T Consensus       221 ~~----~~GKa~alN~gl~~----a~gd~Il~lDaD~~~~-pd~L~~lv~~~~~dp~----v~~V~~~~~~~~~~~~~~~  287 (802)
T 4hg6_A          221 RN----EHAKAGNMSAALER----LKGELVVVFDADHVPS-RDFLARTVGYFVEDPD----LFLVQTPHFFINPDPIQRN  287 (802)
T ss_dssp             SC----CSHHHHHHHHHHHH----CCCSEEEECCTTEEEC-TTHHHHHHHHHHHSSS----CCEEECCCCBSSCCHHHHH
T ss_pred             CC----CCcchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHHhcCCC----eEEEeccEEEeCCchHhhh
Confidence            64    67999999999999    8999999999999975 99999999999 4666    999999999987531    


Q ss_pred             ---CchhhhhhhhhhhhhHhhhhhcCCccccccccceehhhccCCccccccchHhhHhhhcCchhHHhhhhhhccccccC
Q 004692          333 ---HDIYDGSLRSGYRLQWPGMDGLKGPFLTGTGHYIRRESLYGNFKHKGIDLAELKDTFGESNLFIKSLHQSYEHKNVN  409 (736)
Q Consensus       333 ---~d~~~~~~~~f~~~~~~g~d~~~~~~~~Gtg~~~RR~aL~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~  409 (736)
                         -+.+.++.+.++...+.+.+.+++++++|+++++||+++.                                     
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~-------------------------------------  330 (802)
T 4hg6_A          288 LALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALD-------------------------------------  330 (802)
T ss_dssp             HTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHH-------------------------------------
T ss_pred             hhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHH-------------------------------------
Confidence               1223345567889999999999999999999999999992                                     


Q ss_pred             CccchhhHHhhccccccceeeccccccccccccCCCccchHHHHHHHHHCCcEEEEeCCCCCeeEeccCcCHHHHHHhhH
Q 004692          410 GENLSNVLQQETEVLASCSYEHQTKWGEEVGFSYQSVSEDFFTGFILHCKGWTSTYLDPSRPQFLGTSTTNLNDVLIQGT  489 (736)
Q Consensus       410 ~~~~~~~~~~~~~~v~~c~ye~~t~wg~~~G~~~~sitED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~tl~~~l~Qr~  489 (736)
                                                 +.+||+.++++||.+++++++++||++.|+++  +.+.+.+|+|++++++||.
T Consensus       331 ---------------------------~vGgf~~~~~~ED~~l~~rl~~~G~ri~~~~~--~~~~~~~p~t~~~~~~Qr~  381 (802)
T 4hg6_A          331 ---------------------------EAGGFAGETITEDAETALEIHSRGWKSLYIDR--AMIAGLQPETFASFIQQRG  381 (802)
T ss_dssp             ---------------------------HHTTCCCSSSSHHHHHHHHHHTTTCCEEECCC--CCEEECCCCSHHHHHHHHH
T ss_pred             ---------------------------HcCCcCCCCcchHHHHHHHHHHcCCeEEEecC--CEEEecCCCCHHHHHHHHH
Confidence                                       24689999999999999999999999999986  7899999999999999999


Q ss_pred             HHhcccchhhhhhcCCcccCCCCCchhHHHHHHHHhHhhHHhHHHHHHHHHHHHHHHhcCCCcccccChhhHHHHHHHHH
Q 004692          490 RWASGLIDVSISRFCPLLYGPSRMSLLLSMCYGEMSLFPLLYCLPLWCFATLPQLCLLNGIPLYPEVSSPFFMVFSFIFL  569 (736)
Q Consensus       490 RWa~G~~qi~~~~~~p~~~~~~~l~~~qrl~y~~~~~~~~~~~~~~l~~~~~P~~~ll~g~~~~~~~~~~~~~~~~~l~i  569 (736)
                      ||++|.+|+++ +++|++.  +++++.||++|+...+++ +.+++.++++++|++++++|.+++......++.+++.+++
T Consensus       382 RW~~G~~q~l~-~~~pl~~--~~l~~~~rl~~l~~~~~~-~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~~~lp~~l  457 (802)
T 4hg6_A          382 RWATGMMQMLL-LKNPLFR--RGLGIAQRLCYLNSMSFW-FFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLAYMPGYLA  457 (802)
T ss_dssp             HHHHHHHHHHH-HSCTTSC--SSCCHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHH
T ss_pred             HHHccHHHHHH-HhCcccc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHhhcCHHHHHHHHHHHHH
Confidence            99999999998 5578774  689999999999988888 8889999999999999999998876544443333332222


Q ss_pred             HHHHHHHHHHHHhCCccccccchhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCccchhhhhhccccceeeeccc
Q 004692          570 SAICKHLQEVISTGGSVYTWRNEQRIWMIKSVTSHFYGSMDAIMKLLGLRKASFLPTNKVLDNEQVKRYEMGQFDFQTSS  649 (736)
Q Consensus       570 ~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~y~~~~f~f~~~s  649 (736)
                      ...+  +.... .+.....||++.    + .+...++.+...+..++++++.+|+||+|+...++      .  .|   +
T Consensus       458 ~~~~--~~~~~-~~~~r~~~~~~l----~-~~~~~~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~------~--~~---~  518 (802)
T 4hg6_A          458 VSFL--VQNAL-FARQRWPLVSEV----Y-EVAQAPYLARAIVTTLLRPRSARFAVTAKDETLSE------N--YI---S  518 (802)
T ss_dssp             HHHH--HHHHH-HTTTSCTTHHHH----H-HHHHHHHHHHHHHHHHHSTTCCCCCCCCCCCCCSS------C--CB---C
T ss_pred             HHHH--HHHHH-hcCcHHHHHHHH----H-HHHHHHHHHHHHHHHHhCCCCCcceECCCCccccc------c--ch---h
Confidence            2111  11122 233334466542    2 22244555566667778899999999999986543      1  11   3


Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHhhcCC-chHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 004692          650 VFLVPMVSLMILNVAALVCGVIRMIAVGN-WDKLFAQVLLSLYILIINFAIVEGMIVRKDKGRIS  713 (736)
Q Consensus       650 ~~~~P~~~l~ll~l~aiv~gi~r~~~~~~-~~~~~~~~~~~~~~v~~l~p~~~al~~r~~~~~~p  713 (736)
                      ..+.|++++++++++++++|++++..... .....++++|++++++.+.+.+....-|+.+++-|
T Consensus       519 ~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~~l~~~~~~~~~~~~~R~~~  583 (802)
T 4hg6_A          519 PIYRPLLFTFLLCLSGVLATLVRWVAFPGDRSVLLVVGGWAVLNVLLVGFALRAVAEKQQRRAAP  583 (802)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHTTTBCCCCSCCCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhccCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence            56789999999999999999999876432 33445666777777666666555554444444333

PyMOL of 4hg6

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17	Back alignment and structure

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*	Back alignment and structure

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}	Back alignment and structure

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*	Back alignment and structure

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*	Back alignment and structure

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*	Back alignment and structure

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*	Back alignment and structure

>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A	Back alignment and structure

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*	Back alignment and structure

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*	Back alignment and structure

>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*	Back alignment and structure

>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...	Back alignment and structure

>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*	Back alignment and structure

>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*	Back alignment and structure

>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*	Back alignment and structure

>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*	Back alignment and structure

>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*	Back alignment and structure

>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}	Back alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Alignment Graph	Length	Definition	Probability
Query		736
d1xhba2		328	Polypeptide N-acetylgalactosaminyltransferase 1, N	99.82
d1qg8a_		255	Spore coat polysaccharide biosynthesis protein Sps	99.58
d1omza_		265	Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga	99.37
d2bo4a1		381	Mannosylglycerate synthase, MGS {Rhodothermus mari	97.82
d1fo8a_		343	N-acetylglucosaminyltransferase I {Rabbit (Oryctol	90.61

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=8.5e-20  Score=192.61  Aligned_cols=119  Identities=19%  Similarity=0.064  Sum_probs=94.2

Q ss_pred             CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCceEEEEEcCCCCccchhhHHHHHHhhhhhhhhhhhcCCccC
Q 004692           91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI  170 (736)
Q Consensus        91 ~~~~P~VdV~Ipt~~p~nE~~~~v~~Tv~s~~~~dYP~~kl~v~v~DDg~~~~T~~~l~e~~~fa~~wvpfc~~~~v~~r  170 (736)
                      ++++|.|+|+||+   |||....+.+||.|+++++||....+|+|+||||+|.|.....|.                   
T Consensus        18 ~~~~P~vSIIIp~---yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~~~l~~-------------------   75 (328)
T d1xhba2          18 PDNLPTTSVVIVF---HNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLES-------------------   75 (328)
T ss_dssp             CSCCCCEEEEEEE---SSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHH-------------------
T ss_pred             CCCCCCEEEEEec---cCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhHHHHHHH-------------------
Confidence            4678999999999   999867899999999999999866799999999999765422221                   


Q ss_pred             CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcccEEEeecCCCcchhhhhccccCcCe
Q 004692          171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQDTSGENETIRQADLVEMPL  250 (736)
Q Consensus       171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~ye~~~~ri~~~~~~g~~~~~~~h~~~i~v~~~~~~~~~~~~~~~~~~~p~  250 (736)
                                                    |.          +                                ..-+.
T Consensus        76 ------------------------------~~----------~--------------------------------~~~~~   83 (328)
T d1xhba2          76 ------------------------------YV----------K--------------------------------KLKVP   83 (328)
T ss_dssp             ------------------------------HH----------H--------------------------------SSSSC
T ss_pred             ------------------------------HH----------H--------------------------------hcCCC
Confidence                                          10          0                                00123


Q ss_pred             EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCchHHHHHHHHhhcCCC
Q 004692          251 LVYVSREKSPEHLHHFKGGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPK  313 (736)
Q Consensus       251 l~yv~R~k~p~~~~~~KAGaLN~al~~s~~~s~g~~Il~~DAD~~~~~p~~L~~~v~~f~D~~  313 (736)
                      +.++..++     +.|+++|.|.|++.    ++||+|+++|+|.++ +|++|.+++.+|.+..
T Consensus        84 i~vi~~~~-----n~G~~~a~N~Gi~~----a~gd~i~flD~D~~~-~p~~l~~l~~~~~~~~  136 (328)
T d1xhba2          84 VHVIRMEQ-----RSGLIRARLKGAAV----SRGQVITFLDAHCEC-TAGWLEPLLARIKHDR  136 (328)
T ss_dssp             EEEEECSS-----CCCHHHHHHHHHHH----CCSSEEEEEESSEEE-CTTCHHHHHHHHHHCT
T ss_pred             eEEEEecc-----cccchHHHHHHHHh----hhcceeeecCccccc-ChhHHHHHHHHHhcCC
Confidence            55555444     46899999999999    999999999999986 5999999999987654

PyMOL of d1xhba2

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}	Back information, alignment and structure

>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}	Back information, alignment and structure

>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}	Back information, alignment and structure

>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}	Back information, alignment and structure