Citrus Sinensis ID: 004710

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730----
MDRETGVYQNLVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEIFGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNGQLADEELSEYKKDVSSLGPKSSFGSKLKSTLESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVFSAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHRKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTEGIQMSEDDVIVNIDSPGTSELREIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV
cccccccccccccccHHHHHHHHHHHHHcEEEccccccHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHEEEEEEEccccccHHHHHHHHHHcccccccccccccHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccccccccccEEEHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccccccccEEEHHHHHHHHHHHHHEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccccccccccccEEEEcccccccHHHHHHHHHccccccEEEEEEEEEEEccccccccccEEEEEEccccccEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEccccccccccccccccEEEccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHccEEEEEEcEEEEEcccccHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEEc
ccHHHcccccccccccHHHHHHHHHHHccEEEcccccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHEEEEEEcccccccHHHHHHHHHHHHHcHccccccccHHHHHHHccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHEHEccccccHHHHHHHHHcccEEcccccccccEEHHHHHHHHHHHHHHHHccccccccccEEEEcccEEEEEccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccEEEcHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcHHHEEEHHcccccHHHHHHHccccccEEcccEEEEHHHHHccccHHHHHHHHccccHEEEEEEEEEEEcccccccHHHEEEEEEcccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccEEEEEccccccccHHHHHHHHHHHHHHHccEEEEEEccEEEEccccHHHHHHHHHHHHHHHHHHcccccEEEEcccHHHEEEcEEEEc
MDRETGVYQNLVKKESWRTVLTLAYQSLGvvygdlstsplyvykstfaedikhsetneEIFGALSFIFWTLTLVPLLKYVFIVLRaddngeggTFALYSLLCRHArvnslpngqlaDEELSEYKkdvsslgpkssfgskLKSTLESYRVLQRFLLVLTLIGTcmvigdgvltpALSVFSAVSGlelstakehhkyvEVPVACIILIGLFALQhygthrktqkggwmslGGILLCITgseamfadlghfsqLSIKIAFTSLVYPSLILAYMGQAAYlsqhhvldndyrigfyvsvpeklrwPVLVIAILAAVVGSQAIITGTFSIIKQcsalgcfprvkivhtsskihgqiyipeINWILMILCLAVTIgfrdtkrmgnASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLslgpslgivRVRGIGLIHtelvsgipaifSHFVTNLPAFHQVLVFLCIksvpvphvrpeerflvghigprqYRIYRCIVRygyrdvhkddmEFEKDLVCSIAEFIRsgsvginganedpykdddkmtvvgtcsshtegiqmseddvivnidspgtselreiqsptvikpkkrvrfvvpespkiDREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEflrrntrvpsyalsvphastlevgmiyhv
mdretgvyqnlvkkeswrTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEIFGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNGQLADEELSEYKkdvsslgpkssfgskLKSTLESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVFSAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHRKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEErflvghigprqyriYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFirsgsvginganedpykdddKMTVVGTCSShtegiqmseddVIVNIDSpgtselreiqsptvikpkkrvrfvvpespkidREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRrntrvpsyalsvphastlevgMIYHV
MDRETGVYQNLVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEIFGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNGQLADEELSEYKKDVSSLGPKSSFGSKLKSTLESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVFSAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHRKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPvlviailaavvGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVffaicfvfffGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTEGIQMSEDDVIVNIDSPGTSELREIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV
******VYQNLVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEIFGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVN**********************************TLESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVFSAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHRKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVG*************************************************************************************AREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIY**
********************LTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEIFGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNGQLADEELSEYKK**************LKSTLESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVFSAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHRKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFI********************MTV***************************************************************QELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV
MDRETGVYQNLVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEIFGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNGQLADEEL********************KSTLESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVFSAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHRKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTEGIQMSEDDVIVNIDSPGTSELREIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV
**************ESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEIFGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNGQLADEELSEYKKDVSSLGPKSSFGSKLKSTLESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVFSAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHRKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGI**********************************************************KRVRFVVPESPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV
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MDRETGVYQNLVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEIFGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNGQLADEELSEYKKDVSSLGPKSSFGSKLKSTLESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVFSAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHRKTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTEGIQMSEDDVIVNIDSPGTSELREIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query734 2.2.26 [Sep-21-2011]
Q8W4I4782 Potassium transporter 6 O yes no 0.998 0.937 0.750 0.0
Q9M7J9781 Potassium transporter 8 O no no 0.991 0.932 0.710 0.0
Q6YWQ4770 Potassium transporter 25 yes no 0.957 0.912 0.684 0.0
Q67VS5843 Potassium transporter 10 no no 0.983 0.856 0.655 0.0
Q5Z6K9772 Potassium transporter 24 no no 0.959 0.911 0.644 0.0
Q7XIV8788 Probable potassium transp no no 0.991 0.923 0.606 0.0
O22881794 Potassium transporter 2 O no no 0.974 0.900 0.601 0.0
Q8VXB5793 Putative potassium transp no no 0.991 0.918 0.589 0.0
Q8H3P9811 Potassium transporter 7 O no no 0.982 0.889 0.537 0.0
Q942X8783 Probable potassium transp no no 0.987 0.925 0.510 0.0
>sp|Q8W4I4|POT6_ARATH Potassium transporter 6 OS=Arabidopsis thaliana GN=POT6 PE=2 SV=1 Back     alignment and function desciption
 Score = 1165 bits (3015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 588/783 (75%), Positives = 655/783 (83%), Gaps = 50/783 (6%)

Query: 1   MDRETGVYQNLVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEI 60
           M+ E+G YQN  KKESWRTVLTLAYQSLGVVYGDLS SPLYVYKSTFAEDI HSE+NEEI
Sbjct: 1   MEIESGSYQN-AKKESWRTVLTLAYQSLGVVYGDLSISPLYVYKSTFAEDIHHSESNEEI 59

Query: 61  FGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNGQLADEEL 120
           FG LSFIFWT+TLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLP+ QLADE+L
Sbjct: 60  FGVLSFIFWTITLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPSCQLADEQL 119

Query: 121 SEYKKDV--SSLGPKSSFGSKLKSTLESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVF 178
            EYK D   SS  P+S F + LKSTLE + VLQ+ LLVL LIGTCMVIGDGVLTPA+SVF
Sbjct: 120 IEYKTDSIGSSSMPQSGFAASLKSTLEKHGVLQKILLVLALIGTCMVIGDGVLTPAISVF 179

Query: 179 SAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHR-------------------- 218
           SAVSG+ELS +KEHHKY+E+P AC+ILIGLFALQHYGTHR                    
Sbjct: 180 SAVSGVELSMSKEHHKYIELPAACVILIGLFALQHYGTHRVGFLFAPVILLWLMCISAIG 239

Query: 219 -------------------------KTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSI 253
                                    KTQ  GWMSLGGILLCITGSEAMFADLGHFSQLSI
Sbjct: 240 VYNIFHWNPHVYQALSPYYMYKFLKKTQSRGWMSLGGILLCITGSEAMFADLGHFSQLSI 299

Query: 254 KIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAVVG 313
           KIAFTSLVYPSLILAYMGQAAYLSQHH+++++Y IGFYVSVPE+LRWPVLVIAILAAVVG
Sbjct: 300 KIAFTSLVYPSLILAYMGQAAYLSQHHIIESEYNIGFYVSVPERLRWPVLVIAILAAVVG 359

Query: 314 SQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDT 373
           SQAIITGTFSIIKQCSALGCFP+VKIVHTSSKIHGQIYIPEINWILM+LCLAVTIGFRDT
Sbjct: 360 SQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPEINWILMVLCLAVTIGFRDT 419

Query: 374 KRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFL 433
           KR+GNASGLAVITVMLVTTCLMSLVIVLCW KSV FAI FV FFGTIE+LYFSASLIKFL
Sbjct: 420 KRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVIFAIVFVVFFGTIESLYFSASLIKFL 479

Query: 434 EGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIH 493
           EGAWVPIALAF FL+ MC WHYGTLK+YE+D+QNKVS+NWLLSL  +LGI RVRG+GLIH
Sbjct: 480 EGAWVPIALAFCFLLAMCTWHYGTLKRYEYDVQNKVSVNWLLSLSQTLGIARVRGLGLIH 539

Query: 494 TELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCI 553
           TELVSG+PAIFSHFVTNLPAFHQVLVFLC+KSVPVPHVRP+ERFLVG IGP+++RIYRCI
Sbjct: 540 TELVSGVPAIFSHFVTNLPAFHQVLVFLCVKSVPVPHVRPQERFLVGRIGPKEFRIYRCI 599

Query: 554 VRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTEG 613
           VR+GYRDVHKDD EFE DLVCSIAEFIR+ +     A E   +DDD+M+VVGTCS++ +G
Sbjct: 600 VRFGYRDVHKDDFEFEGDLVCSIAEFIRTEAETAATAAETNGEDDDRMSVVGTCSTYMQG 659

Query: 614 IQMSEDDVIVNIDSPGTSEL--REIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELME 671
           I+   +  I + D PGTSE+   + +  +  K KKRVRFVVPE+PKI++E  +EL EL E
Sbjct: 660 IEDHYESDIDDPDKPGTSEIRSPKPKKKSKSKVKKRVRFVVPETPKIEKETRQELMELTE 719

Query: 672 AREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMI 731
           ARE G+AYI+G++Y+KAK GS  LK+L IN GYEFLRRNTR P   L+ PHASTLEVGMI
Sbjct: 720 AREGGVAYIMGNAYMKAKPGSGLLKRLAINIGYEFLRRNTRGPRNMLTSPHASTLEVGMI 779

Query: 732 YHV 734
           Y+V
Sbjct: 780 YNV 782
Probable potassium transporter.
Arabidopsis thaliana (taxid: 3702)
>sp|Q9M7J9|POT8_ARATH Potassium transporter 8 OS=Arabidopsis thaliana GN=POT8 PE=2 SV=2 Back     alignment and function description
>sp|Q6YWQ4|HAK25_ORYSJ Potassium transporter 25 OS=Oryza sativa subsp. japonica GN=HAK25 PE=2 SV=1 Back     alignment and function description
>sp|Q67VS5|HAK10_ORYSJ Potassium transporter 10 OS=Oryza sativa subsp. japonica GN=HAK10 PE=2 SV=1 Back     alignment and function description
>sp|Q5Z6K9|HAK24_ORYSJ Potassium transporter 24 OS=Oryza sativa subsp. japonica GN=HAK24 PE=2 SV=1 Back     alignment and function description
>sp|Q7XIV8|HAK9_ORYSJ Probable potassium transporter 9 OS=Oryza sativa subsp. japonica GN=HAK9 PE=2 SV=1 Back     alignment and function description
>sp|O22881|POT2_ARATH Potassium transporter 2 OS=Arabidopsis thaliana GN=POT2 PE=1 SV=2 Back     alignment and function description
>sp|Q8VXB5|HAK8_ORYSJ Putative potassium transporter 8 OS=Oryza sativa subsp. japonica GN=HAK8 PE=2 SV=2 Back     alignment and function description
>sp|Q8H3P9|HAK7_ORYSJ Potassium transporter 7 OS=Oryza sativa subsp. japonica GN=HAK7 PE=2 SV=3 Back     alignment and function description
>sp|Q942X8|HAK2_ORYSJ Probable potassium transporter 2 OS=Oryza sativa subsp. japonica GN=HAK2 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query734
224111286780 predicted protein [Populus trichocarpa] 0.998 0.939 0.819 0.0
224099721780 predicted protein [Populus trichocarpa] 0.998 0.939 0.818 0.0
255587842774 Potassium transporter, putative [Ricinus 0.980 0.930 0.826 0.0
147771543779 hypothetical protein VITISV_038658 [Viti 0.998 0.940 0.816 0.0
359473437794 PREDICTED: potassium transporter 6-like 0.983 0.909 0.820 0.0
359488715775 PREDICTED: potassium transporter 8-like 0.980 0.929 0.762 0.0
311692753786 high affinity potassium transporter [Sal 0.998 0.932 0.758 0.0
255552638767 Potassium transporter, putative [Ricinus 0.976 0.934 0.764 0.0
297841767783 hypothetical protein ARALYDRAFT_894830 [ 0.998 0.936 0.753 0.0
449446644771 PREDICTED: potassium transporter 8-like 0.989 0.941 0.748 0.0
>gi|224111286|ref|XP_002315804.1| predicted protein [Populus trichocarpa] gi|222864844|gb|EEF01975.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1297 bits (3356), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 640/781 (81%), Positives = 691/781 (88%), Gaps = 48/781 (6%)

Query: 1   MDRETGVYQNLVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEI 60
           MD E+GV+QN VKKESW+TVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDI+HSETNEEI
Sbjct: 1   MDLESGVFQNHVKKESWKTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEI 60

Query: 61  FGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNGQLADEEL 120
           +G LSF+FWTLTLVPLLKYVFIVL+ADDNGEGGTFALYSLLCRHAR+NSLPN Q+ADEEL
Sbjct: 61  YGVLSFVFWTLTLVPLLKYVFIVLKADDNGEGGTFALYSLLCRHARINSLPNCQVADEEL 120

Query: 121 SEYKKDVSS--LGPKSSFGSKLKSTLESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVF 178
            EYKKD ++  L P ++FG +LKSTLE +RVLQRFLL+L LIGTCMVIGDGVLTPALSVF
Sbjct: 121 YEYKKDAANTCLTPTTAFGLRLKSTLEKHRVLQRFLLLLALIGTCMVIGDGVLTPALSVF 180

Query: 179 SAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHR-------------------- 218
           SAVSGLELS AKEHHKYVEVPVAC ILI LFALQHYGTHR                    
Sbjct: 181 SAVSGLELSMAKEHHKYVEVPVACTILICLFALQHYGTHRVGFLFAPVVLMWLLCISAIG 240

Query: 219 -------------------------KTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSI 253
                                    KTQ+GGWMSLGGILLCITGSEAMFADLGHFSQLSI
Sbjct: 241 IYNIIHWNPHVYQALSPYYMYKFLRKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSI 300

Query: 254 KIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAVVG 313
           +IAFTSLVYPSLILAYMGQAAYLSQHHV+DNDY IGFYVSVP KLRWPVLVIAILAAVVG
Sbjct: 301 QIAFTSLVYPSLILAYMGQAAYLSQHHVIDNDYHIGFYVSVPGKLRWPVLVIAILAAVVG 360

Query: 314 SQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDT 373
           SQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINW LM+LCLAVTIGFRDT
Sbjct: 361 SQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWTLMLLCLAVTIGFRDT 420

Query: 374 KRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFL 433
           KR+GNASGLAVITVMLVTTCLMSLVIVLCW K+VF AICFV FFGTIEALYFSASLIKFL
Sbjct: 421 KRLGNASGLAVITVMLVTTCLMSLVIVLCWHKTVFLAICFVCFFGTIEALYFSASLIKFL 480

Query: 434 EGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIH 493
           EGAWVPIAL+FIFLIVMCVWHYGTLK YEFD+QNKVSINWLLSLGPSLGIVRVRGIGLIH
Sbjct: 481 EGAWVPIALSFIFLIVMCVWHYGTLKAYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIH 540

Query: 494 TELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCI 553
           TELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVR +ERFL+GHIGPR+YR+YRCI
Sbjct: 541 TELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRAKERFLIGHIGPREYRLYRCI 600

Query: 554 VRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTEG 613
           VRYGYRDVHKDDMEFEKDLVCSIAE+IR+G+   NGA ++   +DDKMTVVGTC +HT+G
Sbjct: 601 VRYGYRDVHKDDMEFEKDLVCSIAEYIRTGNAEPNGARDEMESEDDKMTVVGTCCTHTDG 660

Query: 614 IQMSEDDVIVNIDSPGTSELREIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAR 673
           IQ+ EDDV   I+S GTSELREI+SP V++P+KRVRF+VP+SPKI+R A +EL ELMEAR
Sbjct: 661 IQLREDDVD-KIESAGTSELREIRSPPVMQPRKRVRFIVPDSPKINRGAREELHELMEAR 719

Query: 674 EAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYH 733
           EAGIAYILGH YV+AKQGSS LKKLV+NYGYEFLRRN+R P+YALSVPHASTLEVGM+Y 
Sbjct: 720 EAGIAYILGHCYVRAKQGSSMLKKLVVNYGYEFLRRNSRAPAYALSVPHASTLEVGMVYR 779

Query: 734 V 734
           V
Sbjct: 780 V 780

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224099721|ref|XP_002311591.1| predicted protein [Populus trichocarpa] gi|222851411|gb|EEE88958.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255587842|ref|XP_002534415.1| Potassium transporter, putative [Ricinus communis] gi|223525338|gb|EEF27967.1| Potassium transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|147771543|emb|CAN75895.1| hypothetical protein VITISV_038658 [Vitis vinifera] Back     alignment and taxonomy information
>gi|359473437|ref|XP_002264992.2| PREDICTED: potassium transporter 6-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|359488715|ref|XP_002274956.2| PREDICTED: potassium transporter 8-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|311692753|gb|ADP95697.1| high affinity potassium transporter [Salicornia europaea] Back     alignment and taxonomy information
>gi|255552638|ref|XP_002517362.1| Potassium transporter, putative [Ricinus communis] gi|223543373|gb|EEF44904.1| Potassium transporter, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|297841767|ref|XP_002888765.1| hypothetical protein ARALYDRAFT_894830 [Arabidopsis lyrata subsp. lyrata] gi|297334606|gb|EFH65024.1| hypothetical protein ARALYDRAFT_894830 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|449446644|ref|XP_004141081.1| PREDICTED: potassium transporter 8-like [Cucumis sativus] gi|449489448|ref|XP_004158314.1| PREDICTED: potassium transporter 8-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query734
TAIR|locus:2016139782 KUP6 "K+ uptake permease 6" [A 0.726 0.681 0.723 2.2e-306
TAIR|locus:2185515781 KUP8 "potassium uptake 8" [Ara 0.720 0.677 0.688 9.2e-288
TAIR|locus:2061838794 KT2 "potassium transporter 2" 0.617 0.570 0.580 2.6e-217
TAIR|locus:2078688789 KUP3 "AT3G02050" [Arabidopsis 0.698 0.650 0.533 3.8e-205
TAIR|locus:2128399775 TRH1 "TINY ROOT HAIR 1" [Arabi 0.701 0.664 0.468 2.7e-178
TAIR|locus:2029589796 KUP10 "K+ uptake permease 10" 0.682 0.629 0.458 3.2e-175
TAIR|locus:2044717793 KUP11 "K+ uptake permease 11" 0.678 0.627 0.456 1.4e-172
TAIR|locus:2119812823 KUP9 "AT4G19960" [Arabidopsis 0.690 0.616 0.438 1.1e-170
TAIR|locus:2195688827 AT1G60160 [Arabidopsis thalian 0.681 0.604 0.446 2e-162
TAIR|locus:2134153855 KUP5 "K+ uptake permease 5" [A 0.698 0.6 0.398 1.6e-143
TAIR|locus:2016139 KUP6 "K+ uptake permease 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2051 (727.0 bits), Expect = 2.2e-306, Sum P(2) = 2.2e-306
 Identities = 397/549 (72%), Positives = 453/549 (82%)

Query:   202 CIILIGLFALQHYGTH--------------RKTQKGGWMSLGGILLCITGSEAMFADLGH 247
             CI  IG++ + H+  H              +KTQ  GWMSLGGILLCITGSEAMFADLGH
Sbjct:   234 CISAIGVYNIFHWNPHVYQALSPYYMYKFLKKTQSRGWMSLGGILLCITGSEAMFADLGH 293

Query:   248 FSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPXXXXXX 307
             FSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHH+++++Y IGFYVSVPE+LRWP      
Sbjct:   294 FSQLSIKIAFTSLVYPSLILAYMGQAAYLSQHHIIESEYNIGFYVSVPERLRWPVLVIAI 353

Query:   308 XXXXXGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVT 367
                  GSQAIITGTFSIIKQCSALGCFP+VKIVHTSSKIHGQIYIPEINWILM+LCLAVT
Sbjct:   354 LAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPEINWILMVLCLAVT 413

Query:   368 IGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVXXXXXXXXXXGTIEALYFSA 427
             IGFRDTKR+GNASGLAVITVMLVTTCLMSLVIVLCW KSV          GTIE+LYFSA
Sbjct:   414 IGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVIFAIVFVVFFGTIESLYFSA 473

Query:   428 SLIKFLEGAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVR 487
             SLIKFLEGAWVPIALAF FL+ MC WHYGTLK+YE+D+QNKVS+NWLLSL  +LGI RVR
Sbjct:   474 SLIKFLEGAWVPIALAFCFLLAMCTWHYGTLKRYEYDVQNKVSVNWLLSLSQTLGIARVR 533

Query:   488 GIGLIHTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQY 547
             G+GLIHTELVSG+PAIFSHFVTNLPAFHQVLVFLC+KSVPVPHVRP+ERFLVG IGP+++
Sbjct:   534 GLGLIHTELVSGVPAIFSHFVTNLPAFHQVLVFLCVKSVPVPHVRPQERFLVGRIGPKEF 593

Query:   548 RIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTC 607
             RIYRCIVR+GYRDVHKDD EFE DLVCSIAEFIR+ +     A E   +DDD+M+VVGTC
Sbjct:   594 RIYRCIVRFGYRDVHKDDFEFEGDLVCSIAEFIRTEAETAATAAETNGEDDDRMSVVGTC 653

Query:   608 SSHTEGIQMSEDDVIVNIDSPGTSELR--EIQSPTVIKPKKRVRFVVPESPKIDREAMKE 665
             S++ +GI+   +  I + D PGTSE+R  + +  +  K KKRVRFVVPE+PKI++E  +E
Sbjct:   654 STYMQGIEDHYESDIDDPDKPGTSEIRSPKPKKKSKSKVKKRVRFVVPETPKIEKETRQE 713

Query:   666 LQELMEAREAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHAST 725
             L EL EARE G+AYI+G++Y+KAK GS  LK+L IN GYEFLRRNTR P   L+ PHAST
Sbjct:   714 LMELTEAREGGVAYIMGNAYMKAKPGSGLLKRLAINIGYEFLRRNTRGPRNMLTSPHAST 773

Query:   726 LEVGMIYHV 734
             LEVGMIY+V
Sbjct:   774 LEVGMIYNV 782
GO:0005886 "plasma membrane" evidence=ISM;IDA
GO:0006813 "potassium ion transport" evidence=ISS
GO:0015079 "potassium ion transmembrane transporter activity" evidence=IEA;ISS
GO:0016020 "membrane" evidence=IEA
GO:0071805 "potassium ion transmembrane transport" evidence=IEA
TAIR|locus:2185515 KUP8 "potassium uptake 8" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2061838 KT2 "potassium transporter 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2078688 KUP3 "AT3G02050" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2128399 TRH1 "TINY ROOT HAIR 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2029589 KUP10 "K+ uptake permease 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2044717 KUP11 "K+ uptake permease 11" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2119812 KUP9 "AT4G19960" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2195688 AT1G60160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2134153 KUP5 "K+ uptake permease 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9M7J9POT8_ARATHNo assigned EC number0.71000.99180.9321nono
Q6YWQ4HAK25_ORYSJNo assigned EC number0.68480.95770.9129yesno
Q8W4I4POT6_ARATHNo assigned EC number0.75090.99860.9373yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pm.C_LG_X0355
potassium ion transporter family protein (780 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query734
PLN00149779 PLN00149, PLN00149, potassium transporter; Provisi 0.0
PLN00148785 PLN00148, PLN00148, potassium transporter; Provisi 0.0
PLN00150779 PLN00150, PLN00150, potassium ion transporter fami 0.0
PLN00151852 PLN00151, PLN00151, potassium transporter; Provisi 0.0
TIGR00794688 TIGR00794, kup, potassium uptake protein 0.0
pfam02705534 pfam02705, K_trans, K+ potassium transporter 0.0
COG3158627 COG3158, Kup, K+ transporter [Inorganic ion transp 1e-124
PRK10745622 PRK10745, trkD, potassium transport protein Kup; P 9e-92
TIGR00794688 TIGR00794, kup, potassium uptake protein 1e-11
>gnl|CDD|177753 PLN00149, PLN00149, potassium transporter; Provisional Back     alignment and domain information 
 Score = 1473 bits (3815), Expect = 0.0
 Identities = 648/780 (83%), Positives = 687/780 (88%), Gaps = 47/780 (6%)

Query: 1   MDRETGVYQNLVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEI 60
           MD E G  QN VKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDI+HSETNEEI
Sbjct: 1   MDLEGGSPQNHVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEI 60

Query: 61  FGALSFIFWTLTLVPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNGQLADEEL 120
           FG LSF+FWTLTL+PLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPN QLADEEL
Sbjct: 61  FGVLSFVFWTLTLIPLLKYVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNCQLADEEL 120

Query: 121 SEYKKD-VSSLGPKSSFGSKLKSTLESYRVLQRFLLVLTLIGTCMVIGDGVLTPALSVFS 179
           SEYKKD  SS  P S FGS LKSTLE +RVLQRFLLVL LIGTCMVIGDGVLTPA+SVFS
Sbjct: 121 SEYKKDSGSSSMPLSGFGSSLKSTLEKHRVLQRFLLVLALIGTCMVIGDGVLTPAISVFS 180

Query: 180 AVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHR--------------------- 218
           AVSGLELS +KEHHKYVEVPVACIILIGLFALQHYGTHR                     
Sbjct: 181 AVSGLELSMSKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCISAIGV 240

Query: 219 ------------------------KTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIK 254
                                   KTQ+GGWMSLGGILLCITGSEAMFADLGHFSQLSIK
Sbjct: 241 YNIFHWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIK 300

Query: 255 IAFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAVVGS 314
           IAFTSLVYPSLILAYMGQAAYLS+HHV+++DYRIGFYVSVPEKLRWPVLVIAILAAVVGS
Sbjct: 301 IAFTSLVYPSLILAYMGQAAYLSKHHVIESDYRIGFYVSVPEKLRWPVLVIAILAAVVGS 360

Query: 315 QAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRDTK 374
           QAIITGTFSIIKQCSALGCFP+VKIVHTSSKIHGQIYIPEINW LM+LCLAVT+GFRDTK
Sbjct: 361 QAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPEINWTLMLLCLAVTVGFRDTK 420

Query: 375 RMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLE 434
           R+GNASGLAVITVMLVTTCLMSLVIVLCW KSV  AICF+FFFGTIEALYFSASLIKFLE
Sbjct: 421 RLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLIKFLE 480

Query: 435 GAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHT 494
           GAWVPIAL+FIFL+VM VWHYGTLK+YEFD+QNKVSINWLLSLGPSLGIVRVRGIGLIHT
Sbjct: 481 GAWVPIALSFIFLLVMYVWHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIHT 540

Query: 495 ELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCIV 554
           ELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVG IGP++YR+YRCIV
Sbjct: 541 ELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPEERFLVGRIGPKEYRLYRCIV 600

Query: 555 RYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTEGI 614
           RYGYRDVHKDDMEFEKDLVCSIAEFIRS     NGA E+   +D++MTVVGTCS+H EGI
Sbjct: 601 RYGYRDVHKDDMEFEKDLVCSIAEFIRSEKPEPNGAPENEEGEDERMTVVGTCSTHLEGI 660

Query: 615 QMSEDDVIVNIDSPGTSELREIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEARE 674
           Q+ EDD     +  GTSELREI+SP V +PKKRVRFVVPESPKIDR A +ELQELMEARE
Sbjct: 661 QLREDDSD-KQEPAGTSELREIRSPPVSRPKKRVRFVVPESPKIDRGAREELQELMEARE 719

Query: 675 AGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV 734
           AG+AYILGHSYV+AKQGSS +KKLVINYGY+FLRRN+R P YALSVPHASTLEVGM+YHV
Sbjct: 720 AGMAYILGHSYVRAKQGSSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV 779

Length = 779
>gnl|CDD|215077 PLN00148, PLN00148, potassium transporter; Provisional Back     alignment and domain information
>gnl|CDD|215078 PLN00150, PLN00150, potassium ion transporter family protein; Provisional Back     alignment and domain information
>gnl|CDD|215079 PLN00151, PLN00151, potassium transporter; Provisional Back     alignment and domain information
>gnl|CDD|129876 TIGR00794, kup, potassium uptake protein Back     alignment and domain information
>gnl|CDD|217193 pfam02705, K_trans, K+ potassium transporter Back     alignment and domain information
>gnl|CDD|225700 COG3158, Kup, K+ transporter [Inorganic ion transport and metabolism] Back     alignment and domain information
>gnl|CDD|182693 PRK10745, trkD, potassium transport protein Kup; Provisional Back     alignment and domain information
>gnl|CDD|129876 TIGR00794, kup, potassium uptake protein Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 734
PLN00149779 potassium transporter; Provisional 100.0
PLN00148785 potassium transporter; Provisional 100.0
PLN00151852 potassium transporter; Provisional 100.0
PLN00150779 potassium ion transporter family protein; Provisio 100.0
TIGR00794688 kup potassium uptake protein. Proteins of the KUP 100.0
PRK10745622 trkD potassium transport protein Kup; Provisional 100.0
PF02705534 K_trans: K+ potassium transporter; InterPro: IPR00 100.0
COG3158627 Kup K+ transporter [Inorganic ion transport and me 100.0
>PLN00149 potassium transporter; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1.5e-239  Score=2023.06  Aligned_cols=732  Identities=88%  Similarity=1.376  Sum_probs=655.0

Q ss_pred             CCCcccccccccccccHHHHHHHHHhhcceeecccCcchHHHHHHhhcCCCCCCCChhhhhhhhHHHHHHHhHhhhheee
Q 004710            1 MDRETGVYQNLVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIKHSETNEEIFGALSFIFWTLTLVPLLKYV   80 (734)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~l~La~~slGVVyGDIGTSPLYv~~~~f~~~~~~~~~~~~vlGvlSLIfWtLtliv~iKYv   80 (734)
                      ||.|+|.+.+..++.+|+.++.|||||+|||||||||||||||+++|+++++..++++||+|+|||||||||||+++|||
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~~~ilGvLSLIfWtL~Liv~iKYv   80 (779)
T PLN00149          1 MDLEGGSPQNHVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIFGVLSFVFWTLTLIPLLKYV   80 (779)
T ss_pred             CCcccCccccccccccHHHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHhhhHHHHHHHHHHHHHhhhhE
Confidence            79999977667778999999999999999999999999999999999876667799999999999999999999999999


Q ss_pred             eEEEEecCCCCchHHHHHHHHhcccccccCCCCCcchhhhhhhhcccCCCCCC-CCcchhhhhhhhhchhhhHHHHHHHh
Q 004710           81 FIVLRADDNGEGGTFALYSLLCRHARVNSLPNGQLADEELSEYKKDVSSLGPK-SSFGSKLKSTLESYRVLQRFLLVLTL  159 (734)
Q Consensus        81 ~ivl~Adn~GEGG~fALysLl~r~~~~~~~p~~~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~le~~~~~~~~l~~l~l  159 (734)
                      +|||||||||||||||||||+|||+|++++||||++|+++++|+++.|..+.+ .+++.++|++||+++.+|.+++++|+
T Consensus        81 ~ivlrAdn~GEGGtfALysLl~r~~~~~l~pn~~~~d~~ls~~~~~~~~~~~~~~~~~~~~k~~le~~~~~~~~ll~l~l  160 (779)
T PLN00149         81 FIVLRADDNGEGGTFALYSLLCRHARVNSLPNCQLADEELSEYKKDSGSSSMPLSGFGSSLKSTLEKHRVLQRFLLVLAL  160 (779)
T ss_pred             EEEEEecCCCCchHHHHHHHHHHhccccCCccccchhhhhhhhhccccccccccchhhhHHHHHHhhhhHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999877533322 34567899999999999999999999


Q ss_pred             hhhhhhccCccccccceeeeccccceeccCccccceEEehhHHHHHHHHHHhhhcccCC---------------------
Q 004710          160 IGTCMVIGDGVLTPALSVFSAVSGLELSTAKEHHKYVEVPVACIILIGLFALQHYGTHR---------------------  218 (734)
Q Consensus       160 ~G~~m~~gDgvlTPAiSVLSAVeGl~v~~p~l~~~~vvv~is~~ILv~LF~iQ~~GT~k---------------------  218 (734)
                      +|+||+||||||||||||||||||||++.|...++++++||||+||++||++||+||+|                     
T Consensus       161 ~G~~m~igDgvlTPAISVLSAVeGl~v~~~~~~~~~vvv~is~~ILv~LF~~Q~~GT~kvg~~FgPIml~Wf~~i~~iGi  240 (779)
T PLN00149        161 IGTCMVIGDGVLTPAISVFSAVSGLELSMSKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCISAIGV  240 (779)
T ss_pred             HHHHHHHhccccchhHHHHHHhhcccccCCCccCCceehHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999765454665899999999999999999999                     


Q ss_pred             ------------------------CCCccceeeechhhhhhccchhhhccCCCCCccceeeehhhhhhhHHHHhcccchh
Q 004710          219 ------------------------KTQKGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAA  274 (734)
Q Consensus       219 ------------------------~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~I~~aw~~~V~P~L~L~Y~GQaA  274 (734)
                                              +||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||||
T Consensus       241 yni~~~~p~Vl~AlnP~y~~~f~~~~~~~g~~~LGgV~L~iTG~EALyADlGHF~~~~Ir~aw~~~V~P~L~L~Y~GQaA  320 (779)
T PLN00149        241 YNIFHWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQAA  320 (779)
T ss_pred             HHHHhcCHhHhhhcCHHHHHHHHHHCCCceeEeecchhhcccchhhhhhcccCCCccceeeeehhhHHHHHHHHhhhHHH
Confidence                                    89999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCCCccccCccceeccCcchhHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHcCCCCceeEEecCCccccceeech
Q 004710          275 YLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPE  354 (734)
Q Consensus       275 ~ll~~p~~~~~~~npFf~~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSii~Qai~Lg~fPr~ki~hTS~~~~GQIYIP~  354 (734)
                      ||++||+..++++||||+++|+|++||+|++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+
T Consensus       321 ~l~~~p~~~~~~~~pFy~~iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvhTS~~~~GQIYIP~  400 (779)
T PLN00149        321 YLSKHHVIESDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYIPE  400 (779)
T ss_pred             HHhcCcchhccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHH
Confidence            99999933336677999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHhheeEEeecCcchhcccccceehhHHHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHhhhcccC
Q 004710          355 INWILMILCLAVTIGFRDTKRMGNASGLAVITVMLVTTCLMSLVIVLCWQKSVFFAICFVFFFGTIEALYFSASLIKFLE  434 (734)
Q Consensus       355 vNw~Lmi~~i~vv~~F~~s~~l~~AYGiaV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~Ki~~  434 (734)
                      |||+||++|+++|++||||++||||||+||++||++||||+++||+.+|+||++++++|+++|+++|++|||||+.||+|
T Consensus       401 vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lv~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~  480 (779)
T PLN00149        401 INWTLMLLCLAVTVGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLIKFLE  480 (779)
T ss_pred             HHHHHHHHHHhheeEecChHHHHHHhhhhhehHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccHHHHHHHHHHHHHHHhhhhHHHHHHHhhccCCChHHHHhcCCCCCCccccCcEEEEeCCCCCcchhhhhhhhccccc
Q 004710          435 GAWVPIALAFIFLIVMCVWHYGTLKKYEFDLQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAF  514 (734)
Q Consensus       435 GGW~pl~ia~~~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~~f~t~~~~~vP~~~~h~l~~~~~l  514 (734)
                      |||+||++|++++++|++||||++++|+++.+|++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++
T Consensus       481 GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~~~~~~~l  560 (779)
T PLN00149        481 GAWVPIALSFIFLLVMYVWHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLPAF  560 (779)
T ss_pred             CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhccCCCCcccCcEEEEEcCCCCCCCHHHHHHHHhCCcc
Confidence            99999999999999999999999999999999999999999999988899999999999999999999999999999999


Q ss_pred             ceEEEEEEEEEecccccCCCccEEEEEecCCCccEEEEEEEEeeecccCCchHHHHHHHHHHHHHHHcCCCCCCCCCCCC
Q 004710          515 HQVLVFLCIKSVPVPHVRPEERFLVGHIGPRQYRIYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSGSVGINGANEDP  594 (734)
Q Consensus       515 he~~Vfl~v~~~~vP~V~~~eR~~v~~l~~~~~~~yrv~vRyGy~d~~~~~~~F~~~lv~~L~~FI~~e~~~~~~~~~~~  594 (734)
                      ||++||||||++|+|+||++|||++++++++++++|||++||||||.+++++|||++|+++|++|||+|+.+...++++.
T Consensus       561 he~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~~~~~r~vvryGy~d~~~d~~dFE~~Lve~L~~FI~~e~~~~~~~~~~~  640 (779)
T PLN00149        561 HQVLVFLCIKSVPVPHVRPEERFLVGRIGPKEYRLYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSEKPEPNGAPENE  640 (779)
T ss_pred             cceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEeeccccccchHHHHHHHHHHHHHHHhhhhccccccccc
Confidence            99999999999999999999999999999999999999999999999988899999999999999999875321111100


Q ss_pred             CCCCCCcceecccCCCCCCcccccccc-ccccCCCCCccccccCCCcccCCccccccccCCCCccchHHHHHHHHHHHHH
Q 004710          595 YKDDDKMTVVGTCSSHTEGIQMSEDDV-IVNIDSPGTSELREIQSPTVIKPKKRVRFVVPESPKIDREAMKELQELMEAR  673 (734)
Q Consensus       595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~~f~~~~~~~~~~~v~eEl~~L~~A~  673 (734)
                      ++.++++++.++.+....+....+... ...+.  +..+.....+++....+|+++|+.+++.+.+++++||+++|++||
T Consensus       641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~  718 (779)
T PLN00149        641 EGEDERMTVVGTCSTHLEGIQLREDDSDKQEPA--GTSELREIRSPPVSRPKKRVRFVVPESPKIDRGAREELQELMEAR  718 (779)
T ss_pred             ccccccccccccccccccccccccccccccccc--cccccccccCccccCcccceeeccccccccchhHHHHHHHHHHHH
Confidence            122445555543321111100000000 00000  000001000111012346788876655555688999999999999


Q ss_pred             HcCcEEEEeeeEEEecCCCChhHHHHHHHHHHHHHhccCCCCcccccCCCCEEEeecEEEC
Q 004710          674 EAGIAYILGHSYVKAKQGSSALKKLVINYGYEFLRRNTRVPSYALSVPHASTLEVGMIYHV  734 (734)
Q Consensus       674 eaGVvYIlG~s~VkAk~~Ss~lKK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGmvY~v  734 (734)
                      |+||+||+||++|||||+|+|+||++|||+|+|||||||+|.++|+|||+|||||||+|||
T Consensus       719 eaGVvYIlG~s~v~Ar~~Ss~~KK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v  779 (779)
T PLN00149        719 EAGMAYILGHSYVRAKQGSSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV  779 (779)
T ss_pred             HcCcEEEecCceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence            9999999999999999999999999999999999999999999999999999999999997

>PLN00148 potassium transporter; Provisional Back     alignment and domain information
>PLN00151 potassium transporter; Provisional Back     alignment and domain information
>PLN00150 potassium ion transporter family protein; Provisional Back     alignment and domain information
>TIGR00794 kup potassium uptake protein Back     alignment and domain information
>PRK10745 trkD potassium transport protein Kup; Provisional Back     alignment and domain information
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members Back     alignment and domain information
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query734
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 4e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 56.0 bits (134), Expect = 4e-08
 Identities = 114/726 (15%), Positives = 212/726 (29%), Gaps = 253/726 (34%)

Query: 1   MDRETGVYQNLVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDI--KHSE--- 55
           MD ETG +Q               YQ     Y D+    L V++  F ++   K  +   
Sbjct: 7   MDFETGEHQ---------------YQ-----YKDI----LSVFEDAFVDNFDCKDVQDMP 42

Query: 56  ----TNEE---IFG------ALSFIFWTLTLVP----------LLK--YVFIV--LRADD 88
               + EE   I            +FWTL              +L+  Y F++  ++ + 
Sbjct: 43  KSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQ 102

Query: 89  NGEGGTFALYSLLCRHARVNSLPNGQLADEELSEYKKDVSSLGPKSSFGSKLKSTLESYR 148
                   +Y       + + L N    ++  ++Y  +VS L P      KL+  L   R
Sbjct: 103 RQPSMMTRMYI-----EQRDRLYND---NQVFAKY--NVSRLQPY----LKLRQALLELR 148

Query: 149 VLQRFLLVLTLIGTCMVIGDG--VLTPALSVFSAVSGLELSTAKEHHKYVEVPVACIILI 206
             +     + + G  + +G G   +              L     +       V C +  
Sbjct: 149 PAKN----VLIDG--V-LGSGKTWVA-------------LDVCLSY------KVQCKMDF 182

Query: 207 GLFALQHYGTHRKTQKGGWMSLG------GIL-----LCITGSEAMFADLGHFSQLSIKI 255
            +F               W++L        +L     L         +   H S + ++I
Sbjct: 183 KIF---------------WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI 227

Query: 256 AFTSLVYPSLILAYMGQAAYLSQHHVLDNDYRIGFYVSVPEKLRWPVLVIAILAAV-VGS 314
                    L+ +   +   L    VL N       V   +             A  +  
Sbjct: 228 HSIQAELRRLLKSKPYENCLL----VLLN-------VQNAK----------AWNAFNLSC 266

Query: 315 QAIITGT--FSIIKQCSALGCFPRVKIVHTSSKIHGQIYIPEINWILMILCLAVTIGFRD 372
           + ++T T    +    SA          H S   H     P+      +L   +    +D
Sbjct: 267 KILLT-TRFKQVTDFLSA------ATTTHISLDHHSMTLTPDEV--KSLLLKYLDCRPQD 317

Query: 373 TKR---MGNASGLAVITVMLVTTCLMS--LVIVLCWQKSVFFAICF-VFFFGTIEALYFS 426
             R     N   L++I   +            V C + +        V        ++  
Sbjct: 318 LPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDR 377

Query: 427 ASLIKFLEGAWVPIALAFIFLIVMCV-WHYGTLKKYE-FDLQNKVSINWLLSLGPSLGIV 484
            S+  F   A +P         ++ + W    + K +   + NK+    L+   P    +
Sbjct: 378 LSV--FPPSAHIPTI-------LLSLIW--FDVIKSDVMVVVNKLHKYSLVEKQPKESTI 426

Query: 485 RVRGIGL-----------IHTELVS-------------GIPA----IFSHFVTNLPAFHQ 516
            +  I L           +H  +V                P      +SH        H 
Sbjct: 427 SIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI-----GHHL 481

Query: 517 VLVFLCIKSVPVPHVRPEERFL---VGHIGP------------RQYRIYRCIVRYGYRDV 561
             +    +      V  + RFL   + H               +Q + Y+    Y    +
Sbjct: 482 KNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYK---PY----I 534

Query: 562 HKDDMEFEKDLVCSIAEFIRSGSVGINGANEDPYKDDDKMTVVGTCSSHTEGIQ---MSE 618
             +D ++E+ LV +I +F+           E+             CS +T+ ++   M+E
Sbjct: 535 CDNDPKYER-LVNAILDFLPK-------IEENLI-----------CSKYTDLLRIALMAE 575

Query: 619 DDVIVN 624
           D+ I  
Sbjct: 576 DEAIFE 581
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query734
4djk_A511 Probable glutamate/gamma-aminobutyrate antiporter; 92.19
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A Back     alignment and structure
Probab=92.19  E-value=1.1  Score=48.92  Aligned_cols=36  Identities=19%  Similarity=0.261  Sum_probs=22.2

Q ss_pred             cceeeechhhhhhccchhhhccCCCCC--ccceeeehh
Q 004710          223 GGWMSLGGILLCITGSEAMFADLGHFS--QLSIKIAFT  258 (734)
Q Consensus       223 ~g~~~LG~V~L~iTGaEALyADlGHFg--~~~I~~aw~  258 (734)
                      .+|..+..++.+.+|-|+.-.=-+-.-  +|.|..|=.
T Consensus       202 ~~~~~~~~~~~a~~G~e~~~~~a~E~k~P~k~ip~ai~  239 (511)
T 4djk_A          202 GTLVVFVAFILSYMGVEASATHVNEMSNPGRDYPLAML  239 (511)
T ss_dssp             TTTTTHHHHHHHHTTGGGGTGGGSSSSCCTTTHHHHHH
T ss_pred             hHHHHHHHHHHHHhhHHHHHHHHHhccCcccchhHHHH
Confidence            456677788999999998644333332  344544433

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00