Citrus Sinensis ID: 004714

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730----
Protein Sequence
MDSSSLEGVALDPSKCSKLSMEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLVSEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLPVPVTDAAMNNSGSDLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVESLDKMISNTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDRDPNDAQVNNYYTYSKETDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDSHVQKLESKHPPEGRIIEEMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEILKDAQARNGRSKLNSKDMENGTGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKVIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKLWH
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHHHHHHHHHHHccccHHHHHcHHcHHHHHHHHHHHHccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccccccEEEEccccccccccccEEEccccccccccccccHHHHHHHHcccccccccccccccccEEEEEccccccccHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHcccHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHccccHHHHHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEcEEEEEEccccccccccccEEEEEEEcccccccccccEEEcccccEEEEcccccccEEEEEEEEEccccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEEcccccccccccEEEEEEcccccccEEEHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccccccccEEcccHcccccHHHHHHHHHHHHHccccHHHHHHcccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEccHHHHcccccccHHHccEEEEEEcccccccccEEEEEccccccccccccccHHHHHHHHccccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEEcccEEEEEEEccccccccccEEEEEEEcccccccccccEEEEccccEEEEEccccccEEEEEEEEEccccccccEEEEEEcccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccHcccccccccccHHcccccccccccccccccccHHcccccccccccccHccccccccccccEEEEccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccccccHHHHHcc
Coil and Loop (DISEMBL)
mdssslegvaldpskcsklsMEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGkerkytglTKLKIIENLLKLVSEKksgereaktdiepqsspassqrpskrqrkndnparlpvpvtdaamnnsgsdLVNAIYCKNSACRATLRKEdvfckrcsccicrkyddnkdpslwltcsseppfggdscgmschLECALknersgigkdrcysgldgsfyciscRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEdevgpltglpvkmgrgivnrlssgpEVQKLCACAVESLDKMIsntilpnpsvqgsnvivpnmvkfeDVRATSLTVVlgsedpspgniiSYTLWHrrahegfparptctlfapntrfvvtglcpateyQFKVvssngttelgrceiwfstgssrdevtncsviersqspatncsslsnpssvedetnnvtpdrdpndaqvnnyytysketdkiastnlcddaidctvlgrgttpadaVSLLDeerannidgsmpdshvqkleskhppegriieemstdngvdtpvptgmecvpymrsleaglpitpckIEILKDAQarngrsklnskdmengtgnrdepqdgstskkrssesrdedctanglsdmdfEHCVKVIRWLECEGHIERNFRQKFLtwyslratpqeVRIVKVFVDTFVEDPASLAEQLMDTFSDcissrrssvvpagfcmklwh
Flexible Loop (DISEMBL)
mdssslegvaldpskcsklsmEEKRELVYQLSKqshsasetlrswtrQEILQILCAElgkerkytgltkLKIIENLLKLVsekksgereaktdiepqsspassqrpskrqrkndnparlpvpvtdaamnnsGSDLVNAIYCKNSACRATLRKEDVFCKRCSCCICrkyddnkdpsLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLvvakntrrvDILCyrlslgqklvnatekyknLSKIVDDAVKMLEDEVGpltglpvkmGRGIVNRLSSGPEVQKLCACAVESLDKMISNTilpnpsvqgsnVIVPNMVKFEDVRATSLTvvlgsedpspgNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKvvssngttelGRCEIWfstgssrdevTNCSVIersqspatncsslsnpssvedetnnvtpdrdpndaqVNNYYTYSKETDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANnidgsmpdshvqkLESKHPPEGRIIEemstdngvdtpvPTGMECVPYMRSLEAGLPITPCKIEILKDAqarngrsklnskdmengtgnrdepqdgstskkrssesrdedctanglsdmdfEHCVKVIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCissrrssvvpagfcmklwh
Low Complexity Region (SEG)
MDSSSLEGVALDPSKCSKLSMEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLVSEKKSGEREAKTDIEpqsspassqrpskrqrkNDNPARLPVPVTDAAMNNSGSDLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVESLDKMISNTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDRDPNDAQVNNYYTYSKETDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDSHVQKLESKHPPEGRIIEEMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEILKDAQARNGRSKLNSKDMENGTGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKVIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKLWH
Disordered region (IsUnstruct)
******************************************RSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLV*****************************************************DLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVESLDKMISNTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTG*************************************************NNYYTYSKETDKIASTNLCDDAIDCTVLGRGTTP****************************************************TGMECVPYMRSLEAGLPITPCKIEILK************************************************LSDMDFEHCVKVIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKLW*
Disordered Region (DISOPRED)
******E*************************K******ETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLK********************************************************LVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNE************LDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVESLD**********************MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGR******************************************************************************************************************************************************************************************************************************DFEHCVKVIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKLWH
Disordered Region (DISEMBL)
************PSKCSKLSMEE*******************RSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLVSEK********************************PARLPVPVTDAAMNNSGSDLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVESLDKMISNTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQ***********************PDRDPNDAQVNNYYTYSKETDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDSHVQKLESKHPPEGRIIEEMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEILKDAQARNGRSKLNSKDME****************************ANGLSDMDFEHCVKVIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKLWH
Disordered Region (DISPRO)
*******GVALDPSKCSKLSMEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLVSE***************************************************DLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVESLDKMISNT**********NVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSS******************************************************************************************************SH*Q*****HP**GRIIEEMS**************************************************************************************SDMDFEHCVKVIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFC*****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MDSSSLEGVALDPSKCSKLSMEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLVSEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLPVPVTDAAMNNSGSDLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVESLDKMISNTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDRDPNDAQVNNYYTYSKETDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDSHVQKLESKHPPEGRIIEEMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEILKDAQARNGRSKLNSKDMENGTGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKVIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKLWH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	734	2.2.26 [Sep-21-2011]
Q9FIE3	620	Protein VERNALIZATION INS	no	no	0.566	0.670	0.470	1e-103
Q84TI3	1162	Protein OBERON 4 OS=Arabi	no	no	0.205	0.129	0.232	2e-07
Q84N38	549	OBERON-like protein OS=Ni	N/A	no	0.125	0.167	0.292	0.0003
Q94B71	733	Protein OBERON 3 OS=Arabi	no	no	0.193	0.193	0.236	0.0004

>sp|Q9FIE3|VIN3_ARATH Protein VERNALIZATION INSENSITIVE 3 OS=Arabidopsis thaliana GN=VIN3 PE=2 SV=2

 Score =  378 bits (970), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 226/480 (47%), Positives = 295/480 (61%), Gaps = 64/480 (13%)

Query: 1   MDSSSLE-GVALDPSKCSKLSMEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELG 59
           MDSSS E    ++  K + L++ E+REL++ LS Q   ASE L SW+R EI++I+CAE+G
Sbjct: 21  MDSSSFEDNECIETCKPNVLNVSERRELIHALSNQPEEASELLNSWSRNEIMKIICAEMG 80

Query: 60  KERKYTGLTKLKIIENLLKLVSEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARL 119
           KERKYTGL K K+IENLL LVS              P    + S R + R+++      +
Sbjct: 81  KERKYTGLNKPKLIENLLNLVS-------------RPLGETSCSDRRNSRKKEKKMIGYI 127

Query: 120 PVPVTDAAMNNSGSDLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLT 179
                              I C+N ACRA L  +D FC+RCSCCIC+K+DDNKDPSLWLT
Sbjct: 128 -------------------ICCENLACRAALGCDDTFCRRCSCCICQKFDDNKDPSLWLT 168

Query: 180 CSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQ 239
           C        D+CG SCHLEC LK +R GIG D     LDG FYC  C K NDLLGCW+KQ
Sbjct: 169 C--------DACGSSCHLECGLKQDRYGIGSD----DLDGRFYCAYCGKDNDLLGCWRKQ 216

Query: 240 LVVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGR 299
           + VAK TRRVD+LCYRLSLGQKL+  T KY+NL +++D+AVK LE +VGPL+G  +KM R
Sbjct: 217 VKVAKETRRVDVLCYRLSLGQKLLRGTTKYRNLLELMDEAVKKLEGDVGPLSGWAMKMAR 276

Query: 300 GIVNRLSSGPEVQKLCACAVESLDKMISNTILPNPSVQGSNVIVPNMVKFEDVRATSLTV 359
           GIVNRLSSG  VQKLC+ A+E+LDK++S    P+ SV G    +   V+ E+++A S+TV
Sbjct: 277 GIVNRLSSGVHVQKLCSQAMEALDKVVS----PSESVSGQGDKMT--VRVEEIQARSVTV 330

Query: 360 VLGSEDPSP---GNIISYTLWHRRAH-EGFPARPTCTLFAPNTRFVVTGLCPATEYQFKV 415
            + SE+PS      I  + L+ R++  E   ++  C ++ P T   + GL P TE+  +V
Sbjct: 331 RVDSEEPSSSTQNKITGFRLFCRKSKDEECSSQGNCVVYLPETTSAIQGLEPDTEFCLRV 390

Query: 416 VSSNGTTELGRCEIWFST-GSSRDEVTNCSVIERSQSPATNCSS--LSNPSSVEDETNNV 472
           VS N   +L   E+ F+T     DE  +       QSP TN SS   SNPS  EDE+NNV
Sbjct: 391 VSFNEEGDLDESELRFTTLKDDGDEAGD------QQSPLTNSSSGLCSNPSLPEDESNNV 444

Plays a central role in vernalization by mediating the initial transcriptional repression of the homeotic gene FLC, a floral repressor, after a cold treatment. However, due to its transient expression, it can not maintain repression of FLC, which is then maintained by Polycomb Group complexes containing VRN2 throughout development. Required to deacetylate histones on the FLC promoter.
Arabidopsis thaliana (taxid: 3702)

>sp|Q84TI3|OBE4_ARATH Protein OBERON 4 OS=Arabidopsis thaliana GN=OBE4 PE=1 SV=2

 Score = 58.2 bits (139), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 25/176 (14%)

Query: 133 SDLVNAIYCKNSACRATL----------RKEDVFCKRCSCCICRKYDDNKDPSLWLTCSS 182
           +++   + CKN +CR  L           ++D FC  C C +C  +D   +   W+ C  
Sbjct: 799 AEIFMNMRCKNLSCRVLLPVDECDCRVCSRKDGFCSACMCLVCSNFDMASNTCSWVGC-- 856

Query: 183 EPPFGGDSCGMSCHLECALKNE--RSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQL 240
                 D C   CH +C +K    R+GI         +  F+C++C   +++ G  K+  
Sbjct: 857 ------DVCLHWCHTDCGIKESYIRNGINASGAPGMTEMQFHCVACNHPSEMFGFVKEVF 910

Query: 241 VVAKNTRRVDILCYRLSLGQKLVNATE--KYKNLSKIVDDAVKMLEDEVGPLTGLP 294
           +      + +  C  L    K+ ++++  + K L +  D    ML      L GLP
Sbjct: 911 LNFAREWKFERFCKELEYVNKIFSSSKDSRGKQLRQAAD---AMLASLKSKLIGLP 963

Arabidopsis thaliana (taxid: 3702)

>sp|Q84N38|PVIP_NICBE OBERON-like protein OS=Nicotiana benthamiana GN=PVIP PE=1 SV=1

 Score = 48.1 bits (113), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 21/113 (18%)

Query: 141 CKNSACRATL----------RKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDS 190
           C+N AC + L           K++ FC  C C IC K+D   +   W+ C        D 
Sbjct: 196 CRNIACGSMLPAEECSCEICAKKNGFCNLCMCVICYKFDFEVNSCRWIGC--------DL 247

Query: 191 CGMSCHLECALKNERSGIGKD--RCYSGLDGSFYCISCRKVNDLLGCWKKQLV 241
           C    H +CA+ N + G G       S  +  F C +C + ++LLG W K + 
Sbjct: 248 CSHWTHTDCAISNGQIGTGPSVKNGASSAETLFRCHACSRTSELLG-WVKDVF 299

Required for the maintenance and/or establishment of both the shoot and root meristems, probably by controlling the expression of the meristem genes and of genes required for auxin responses. Involved in the development of the basal pole and in auxin-mediated root and vascular development in the embryo (By similarity). Confers sensitivity to turnip mosaic virus (TuMV) probably by promoting viral movement and multiplication via interaction with TuMV VPg.

Nicotiana benthamiana (taxid: 4100)

>sp|Q94B71|OBE3_ARATH Protein OBERON 3 OS=Arabidopsis thaliana GN=OBE3 PE=1 SV=1

 Score = 47.4 bits (111), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 27/169 (15%)

Query: 139 IYCKNSACRATLRKEDV----------FCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGG 188
           + C+N  C++ L  +D           FC  C C +C ++D   +   W+ C        
Sbjct: 406 LRCRNVNCKSLLPVDDCECKICSNNKGFCSSCMCPVCLRFDSASNTCSWVGC-------- 457

Query: 189 DSCGMSCHLECALKNERSGIGKDRCYSGLDGS----FYCISCRKVNDLLGCWKKQLVVAK 244
           D C   CH  C +  +++ I       G  G+    F+CI C   +++ G  K   V   
Sbjct: 458 DVCSHWCHAACGI--QKNLIKPGHSLKGQRGTTEMMFHCIGCAHKSEMFGFVKDVFVCCA 515

Query: 245 NTRRVDILCYRLSLGQKLVNATE--KYKNLSKIVDDAVKMLED-EVGPL 290
               ++ L   L   +K+   ++  K K L    ++ VK LE  ++ PL
Sbjct: 516 KNWGLETLIKELDCVRKVFRGSDDAKGKALHLKANEMVKKLESKQISPL 564

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	734
356562279	737	PREDICTED: protein VERNALIZATION INSENSI	0.993	0.989	0.661	0.0
356546032	736	PREDICTED: protein VERNALIZATION INSENSI	0.991	0.989	0.662	0.0
225446034	738	PREDICTED: protein VERNALIZATION INSENSI	0.994	0.989	0.654	0.0
255580419	710	conserved hypothetical protein [Ricinus	0.957	0.990	0.668	0.0
357479623	730	Protein VERNALIZATION INSENSITIVE [Medic	0.987	0.993	0.630	0.0
449457169	737	PREDICTED: protein VERNALIZATION INSENSI	0.997	0.993	0.588	0.0
224126067	679	predicted protein [Populus trichocarpa]	0.905	0.979	0.632	0.0
297735403	652	unnamed protein product [Vitis vinifera]	0.882	0.993	0.607	0.0
380710177	739	vernalization insensitive 3 [Solanum lyc	0.995	0.989	0.578	0.0
449507054	734	PREDICTED: protein VERNALIZATION INSENSI	0.989	0.989	0.589	0.0

>gi|356562279|ref|XP_003549399.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max]

 Score =  989 bits (2556), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/735 (66%), Positives = 579/735 (78%), Gaps = 6/735 (0%)

Query: 4   SSLEGVALDPSKCSKLSMEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERK 63
           SS EG+ALDPSKCSKLSMEEKRELVY++SK SH ASE L+SW+RQEILQILCAE+GKERK
Sbjct: 5   SSFEGLALDPSKCSKLSMEEKRELVYEVSKWSHGASEMLQSWSRQEILQILCAEMGKERK 64

Query: 64  YTGLTKLKIIENLLKLVSEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLPVPV 123
           YTGLTKLKIIENLLK+VSEKKSG  E  TD EPQSSPA  Q+P+KRQRK++NP+ +PVP 
Sbjct: 65  YTGLTKLKIIENLLKIVSEKKSGGNETATDPEPQSSPAPGQKPAKRQRKSENPSHVPVPA 124

Query: 124 TDAAMNNSGSDLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSE 183
           T   +NN G D VN  YCKNSAC+ATL +   FCKRCSCCIC +YDDNKDPSLWL CSSE
Sbjct: 125 TSITVNNGG-DSVNTAYCKNSACKATLNQSYAFCKRCSCCICHQYDDNKDPSLWLICSSE 183

Query: 184 PPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVA 243
            PF G SCG+SCHLECALK++ SGI KD  +  LDG FYC+SC KVNDLLGCW+KQL+VA
Sbjct: 184 NPFPGVSCGLSCHLECALKHDGSGIAKDGEHPKLDGGFYCVSCGKVNDLLGCWRKQLMVA 243

Query: 244 KNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVN 303
           K+TRRVDILCYR+SL Q+L+  TE Y+ L KIVD+AVK LE EVGPL G PVK+GRGIVN
Sbjct: 244 KDTRRVDILCYRVSLSQRLLQGTEVYEELYKIVDEAVKKLEPEVGPLIGSPVKIGRGIVN 303

Query: 304 RLSSGPEVQKLCACAVESLDKMISNTILPN---PSVQGSNVIVPNMVKFEDVRATSLTVV 360
           RLSSGPEVQKLC  A+ESLD ++S  ILP+   P+ Q ++++ PNMV+FEDV AT+LT++
Sbjct: 304 RLSSGPEVQKLCGFALESLDSLLSKRILPSSPKPTTQDAHLLAPNMVRFEDVTATTLTII 363

Query: 361 LGSEDPSPGNIISYTLWHRRAHE-GFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN 419
           LGSE+PS   I  YTLWHR+  +  +P  PTCT   PN RF V+GL P TEY FKVVS N
Sbjct: 364 LGSEEPSGEIIAGYTLWHRKVDDVDYPTDPTCTSLLPNRRFRVSGLIPGTEYSFKVVS-N 422

Query: 420 GTTELGRCEIWFSTGSSRDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDRDPN 479
              E G CE+  ST    +EV NCS  ERSQSP TNCSSLSNPSSVEDETNN  P  D  
Sbjct: 423 DLRESGMCEVQVSTEHGEEEVPNCSATERSQSPVTNCSSLSNPSSVEDETNNCNPYSDLT 482

Query: 480 DAQVNNYYTYSKETDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDS 539
           D + ++Y +Y K+++++AS NL +D I+C+ LG    P DA SL D++ A     S+P S
Sbjct: 483 DNRADHYPSYHKDSNQLASGNLSNDVINCSNLGSVGLPPDADSLSDKQHAGGTTASIPSS 542

Query: 540 HVQKLESKHPPEGRIIEEMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEILKDAQ 599
            V KLE+KH PE ++ E+MSTD+G+++P  TG ECVP + S + GLP TPCK+E LKD  
Sbjct: 543 DVLKLENKHSPEEQVTEDMSTDDGLNSPALTGRECVPLVGSSKGGLPNTPCKLETLKDGP 602

Query: 600 ARNGRSKLNSKDMENGTGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKVIRW 659
            +N RSK + KD EN +G R+ PQDGSTSKKRS E ++E   ANG SD DFE+ VKVIRW
Sbjct: 603 GKNKRSKSSGKDQENVSGKREGPQDGSTSKKRSGERQEEGRVANGFSDRDFEYYVKVIRW 662

Query: 660 LECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSR 719
           LECEGHIE+NFRQKFLTWYSLRAT QEVRIVK+++DTF+EDPASLAEQL+DTFS+CISS+
Sbjct: 663 LECEGHIEKNFRQKFLTWYSLRATSQEVRIVKIYIDTFLEDPASLAEQLVDTFSECISSK 722

Query: 720 RSSVVPAGFCMKLWH 734
           R+SVVPAGFCMKLWH
Sbjct: 723 RTSVVPAGFCMKLWH 737

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356546032|ref|XP_003541436.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Glycine max]

 Score =  986 bits (2550), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 487/735 (66%), Positives = 578/735 (78%), Gaps = 7/735 (0%)

Query: 4   SSLEGVALDPSKCSKLSMEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERK 63
           SS EG+ALDPSKCSKLSMEEKRELVY++S  SH ASE L+SW+RQEILQILCAE+GKERK
Sbjct: 5   SSFEGLALDPSKCSKLSMEEKRELVYEVSNWSHGASEMLQSWSRQEILQILCAEMGKERK 64

Query: 64  YTGLTKLKIIENLLKLVSEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLPVPV 123
           YTGLTKLKIIENLLK+VSEKKSG  E  TD EPQSSPA  Q+P+KRQRK++NP+ +PVP 
Sbjct: 65  YTGLTKLKIIENLLKIVSEKKSGGNETATDPEPQSSPAPGQKPAKRQRKSENPSHIPVPA 124

Query: 124 TDAAMNNSGSDLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSE 183
           T   +NN G D +N  +CKNSAC+ATL + D FCKRCSCCIC +YDDNKDPSLWL CSSE
Sbjct: 125 TSVPVNNGG-DSINTTFCKNSACKATLNQSDAFCKRCSCCICHQYDDNKDPSLWLICSSE 183

Query: 184 PPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVA 243
            PF G SCG+SCHLECALK++ SGIGKD     LDG FYC+SC K+NDLLGCW+KQL+VA
Sbjct: 184 NPFPGVSCGLSCHLECALKHDGSGIGKDGERPKLDGGFYCVSCWKINDLLGCWRKQLMVA 243

Query: 244 KNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVN 303
           K+TRRVDILCYR+SL Q+L+  TE Y+ L KIVD+AVK LE EVGPLTG PVK+GRGIVN
Sbjct: 244 KDTRRVDILCYRVSLSQRLLQGTEMYEELYKIVDEAVKKLEPEVGPLTGSPVKIGRGIVN 303

Query: 304 RLSSGPEVQKLCACAVESLDKMISNTILP---NPSVQGSNVIVPNMVKFEDVRATSLTVV 360
           RLSSGPEVQKLC  A+ESLD + S  ILP    P+ Q + ++ PNM++FEDV AT+LT++
Sbjct: 304 RLSSGPEVQKLCGFALESLDSL-SKRILPLSPKPTNQDAYLLAPNMLRFEDVTATTLTII 362

Query: 361 LGSEDPSPGNIISYTLWHRRAHE-GFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN 419
           LGSE+PS   +  YTLWHR+  +  +P  PTCT   PN RF V+GL P TEY FKVVS N
Sbjct: 363 LGSEEPSGEILAGYTLWHRKVDDVDYPMDPTCTSLLPNRRFSVSGLIPGTEYSFKVVS-N 421

Query: 420 GTTELGRCEIWFSTGSSRDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDRDPN 479
              E G CE+  ST    +EV NCS  ERSQSP TNCSSLSNPSSVEDETNN  P  D  
Sbjct: 422 DLRESGMCEVQVSTEHGEEEVPNCSATERSQSPVTNCSSLSNPSSVEDETNNCNPYSDLT 481

Query: 480 DAQVNNYYTYSKETDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDS 539
           D + ++Y +Y K+++K+AS NL +DAI+C+ LG    P DA SL D++ A     S+P S
Sbjct: 482 DNRADHYPSYHKDSNKLASGNLSNDAINCSNLGGAGLPPDADSLSDKQHAGGTTASIPSS 541

Query: 540 HVQKLESKHPPEGRIIEEMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEILKDAQ 599
            V KLE+KH PE +I E+MSTD+G+ +P  TG ECVP + S E GLP TPCK+E LKD  
Sbjct: 542 DVLKLENKHSPEEQITEDMSTDDGLISPALTGRECVPLVGSSEGGLPNTPCKLETLKDGP 601

Query: 600 ARNGRSKLNSKDMENGTGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKVIRW 659
            +N RSK + KD EN +G R+ PQDGSTSKKRS E ++E   ANG SD DFE+ VKVIRW
Sbjct: 602 GKNKRSKSSGKDQENVSGKREGPQDGSTSKKRSGERQEEGRVANGFSDRDFEYYVKVIRW 661

Query: 660 LECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSR 719
           LECEGHIE+NFRQKFLTWYSLRATPQEVRIVK+++DTF+EDPASLAEQL+DTFS+C+SS+
Sbjct: 662 LECEGHIEKNFRQKFLTWYSLRATPQEVRIVKIYIDTFLEDPASLAEQLVDTFSECLSSK 721

Query: 720 RSSVVPAGFCMKLWH 734
           R+SVVPAGFCMKLWH
Sbjct: 722 RTSVVPAGFCMKLWH 736

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225446034|ref|XP_002270335.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Vitis vinifera]

 Score =  966 bits (2497), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 486/742 (65%), Positives = 584/742 (78%), Gaps = 12/742 (1%)

Query: 1   MDSSSLEGVALDPSKCSKLSMEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGK 60
           MDSSS EG+  DPSK +KLSMEEKRELVY +SK S    E L+SW+RQEILQILCAE+GK
Sbjct: 1   MDSSS-EGIVYDPSKINKLSMEEKRELVYAVSKWSRGGPEMLQSWSRQEILQILCAEMGK 59

Query: 61  ERKYTGLTKLKIIENLLKLVSEKKSGEREAKTDIE----PQSSPASSQRPSKRQRKNDNP 116
           ERKYTGLTKLKIIE+LL++VSEK S E+E  T+ E     Q S A++QR SKRQRK D+P
Sbjct: 60  ERKYTGLTKLKIIEHLLRVVSEKNSVEQEVVTNHEINHESQPSAATNQRTSKRQRKADHP 119

Query: 117 ARLPVPVTDAAMNNSGSDLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSL 176
           +RLPV   + +++N   DL NAIYCKN ACRA L +E  FCKRCSCCIC +YDDNKDPSL
Sbjct: 120 SRLPVAANNHSISNGDGDLGNAIYCKNLACRANLSREYEFCKRCSCCICHQYDDNKDPSL 179

Query: 177 WLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCW 236
           WLTCSS+PPF G SCGMSCHLECA K+E+SGI KD  +  LDGSFYC+SC KVND+LGCW
Sbjct: 180 WLTCSSDPPFQGVSCGMSCHLECAFKHEKSGIAKDGRHVRLDGSFYCVSCGKVNDMLGCW 239

Query: 237 KKQLVVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVK 296
           +KQL++AK TRRVDILCYR+SL QKL+N T+KY+ L +IV++AVK LE EVGPLTGLPVK
Sbjct: 240 RKQLMMAKETRRVDILCYRVSLSQKLLNGTKKYQKLYEIVEEAVKKLEAEVGPLTGLPVK 299

Query: 297 MGRGIVNRLSSGPEVQKLCACAVESLDKMISNTI---LPNPSVQGSNVIVPNMVKFEDVR 353
             RGIVNRLSSGPEVQ+LCA A+ESLD ++SN+     P P +Q + ++ P+ ++FEDV 
Sbjct: 300 TARGIVNRLSSGPEVQRLCALALESLDSVLSNSHPRPAPGPKIQDAGLVAPS-IRFEDVC 358

Query: 354 ATSLTVVLGSEDPSPGNIISYTLWHRRAHE-GFPARPTCTLFAPNTRFVVTGLCPATEYQ 412
           +TSLTV+LGSED S  N+ISY LWHR++++  +PA P CT+ APN RF  + L P+TEY 
Sbjct: 359 STSLTVILGSEDSSTDNVISYKLWHRKSNDLEYPAEPACTMLAPNKRFTFSDLTPSTEYV 418

Query: 413 FKVVSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNV 472
           FKVVS   T ELG  E+ FST SS D++    V ERSQSPATNCSSLSNPSSVEDETNNV
Sbjct: 419 FKVVSFQDTRELGMGEVQFSTSSSGDDIPKSLVAERSQSPATNCSSLSNPSSVEDETNNV 478

Query: 473 TPDRDPNDAQVNNYYTYSKETDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNI 532
           TP  D N+ + +NY  Y K TDK  STNL ++A +CT   +   PAD+V + D+ER   +
Sbjct: 479 TPYHDQNENREDNYPGYCKGTDKTVSTNLSNEATNCTGTDQEGNPADSVFVSDDERDLRV 538

Query: 533 DGSMPDSHVQKLESKHPPEGRIIEEMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKI 592
             SMP   V K ++K   E +IIEEMSTD   +TPV TGMECVP++ S EAGLPITPCK+
Sbjct: 539 VVSMP--KVLKPDNKTSLECQIIEEMSTDKEANTPVRTGMECVPFVGSSEAGLPITPCKL 596

Query: 593 EILKDAQARNGRSKLNSKDMENGTGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEH 652
           EI KD   RNGR K ++ D+++G+G  DEPQ GS+SKKRS+E +DE+C ANG SD DFE+
Sbjct: 597 EIFKDGLGRNGRPKPSTMDLDDGSGKGDEPQAGSSSKKRSAERQDEECAANGPSDRDFEY 656

Query: 653 CVKVIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTF 712
            VKVIRWLECEGH+E+NFRQKFLTWYSLRATPQEVRIVKVFVDT +EDPASLAEQL+DTF
Sbjct: 657 YVKVIRWLECEGHVEKNFRQKFLTWYSLRATPQEVRIVKVFVDTLIEDPASLAEQLIDTF 716

Query: 713 SDCISSRRSSVVPAGFCMKLWH 734
           S+ ISS+RSSVVPAGFCMKLWH
Sbjct: 717 SETISSKRSSVVPAGFCMKLWH 738

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255580419|ref|XP_002531036.1| conserved hypothetical protein [Ricinus communis] gi|223529389|gb|EEF31353.1| conserved hypothetical protein [Ricinus communis]

 Score =  962 bits (2486), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 482/721 (66%), Positives = 573/721 (79%), Gaps = 18/721 (2%)

Query: 21  MEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLV 80
           M+EKRELVYQLSK S  ASE L+SW+RQEILQILC E+GKERKYTGLTKLKIIE+LLK+V
Sbjct: 1   MDEKRELVYQLSKCS-GASEMLQSWSRQEILQILCVEMGKERKYTGLTKLKIIEHLLKIV 59

Query: 81  SEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLPVPVTDAAMNNSGSDLVNAIY 140
           SEKK+GE E  TD E +SSPAS +R SKRQRK DNP+RL VPV   A +N+G+DL N IY
Sbjct: 60  SEKKAGECEVTTDAETESSPASVRRSSKRQRKIDNPSRLTVPVNYTATSNAGNDLANVIY 119

Query: 141 CKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECA 200
           CKNSACRATL+++D FCKRCSCCIC KYDDNKDPSLWLTCSS+PPF   +CGMSCHL+CA
Sbjct: 120 CKNSACRATLKQDDAFCKRCSCCICYKYDDNKDPSLWLTCSSDPPFQAVTCGMSCHLDCA 179

Query: 201 LKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQ 260
           LK+E SGIGKD    G DGSF CI+C KVNDLLGCW+KQL++AK+TRRVDILCYRLSL Q
Sbjct: 180 LKHESSGIGKD----GYDGSFRCIACWKVNDLLGCWRKQLLMAKDTRRVDILCYRLSLSQ 235

Query: 261 KLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACAVE 320
           KL++ + KY+NL +IVD+AVK LEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCA A+E
Sbjct: 236 KLISRSGKYQNLYEIVDEAVKKLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCAFALE 295

Query: 321 SLDKMISNTI---LPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLW 377
           SLDK++S+T       P +   N+    +V+ EDV +TSLTVVLGSED S   ++ YTLW
Sbjct: 296 SLDKLLSSTTAHSFSAPVITDLNLTASTIVRIEDVNSTSLTVVLGSEDTSLDTVVGYTLW 355

Query: 378 HRRAHE-GFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT-TELGRCEIWFSTGS 435
           HR+  + G+PA PTCTLF PNTRFVVTGLC AT+Y FK VS N    E+G CE+   T  
Sbjct: 356 HRKTRDTGYPAEPTCTLFVPNTRFVVTGLCSATDYHFKAVSFNDERREMGTCEVRCCT-- 413

Query: 436 SRDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDRDPNDAQVNNYYTYSKETDK 495
            +DEV NCS +ERSQSPATNCSSLSNPSSVEDETN+  P  D    +  NY +Y K+ +K
Sbjct: 414 -QDEVPNCSAVERSQSPATNCSSLSNPSSVEDETNHNAPCGDQTVNRAYNYPSYCKDGNK 472

Query: 496 IASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDSHVQKLESKHPPEGRII 555
           I S+N+ +  I C  +G G T  +AV LLDEE    +  SMP   +QKL+++H  E +I+
Sbjct: 473 IVSSNVLNGIISCAGMGEGRTLTNAVPLLDEEHTVQVVTSMPCCDMQKLQNEHSHEDQIV 532

Query: 556 EEMSTDNGVDTPVPTGMECVPY--MRSLEAGLPITPCKIEILKDAQARNGRSKLNSKDME 613
           +E ST+NG D P+ T +ECVP+    ++E  LPITPCK++++KD Q R+GRSK ++KD+ 
Sbjct: 533 DETSTENGSDAPIHTDLECVPFEGKGNIETSLPITPCKLDMIKDGQGRHGRSKSSNKDLL 592

Query: 614 NGTGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKVIRWLECEGHIERNFRQK 673
           NGTG  +EPQD STSKKRS E RDE+CT    SD DFE+ VKVIR LECEGHIE+NFRQK
Sbjct: 593 NGTGKGEEPQDASTSKKRSGERRDEECTH---SDRDFEYYVKVIRLLECEGHIEKNFRQK 649

Query: 674 FLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVVPAGFCMKLW 733
           FLTWYSLRATPQEVR+VK FVDTF++DPASLAEQL+DTFS+CISSRRSSVVPAGFCMKLW
Sbjct: 650 FLTWYSLRATPQEVRVVKAFVDTFIQDPASLAEQLVDTFSECISSRRSSVVPAGFCMKLW 709

Query: 734 H 734
           H
Sbjct: 710 H 710

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357479623|ref|XP_003610097.1| Protein VERNALIZATION INSENSITIVE [Medicago truncatula] gi|355511152|gb|AES92294.1| Protein VERNALIZATION INSENSITIVE [Medicago truncatula]

 Score =  915 bits (2364), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 466/739 (63%), Positives = 560/739 (75%), Gaps = 14/739 (1%)

Query: 1   MDSSSLEGVALDPSKCSKLSMEEKRELVYQLSKQSH-SASETLRSWTRQEILQILCAELG 59
           M + S   VALDPSK SKLSMEEKRELVY++SK SH  ASE L+SW+RQEILQILCAE+G
Sbjct: 1   MATDSSSQVALDPSKFSKLSMEEKRELVYEISKSSHDGASEILQSWSRQEILQILCAEMG 60

Query: 60  KERKYTGLTKLKIIENLLKLVSEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARL 119
           KERKYTGLTK+KIIENLLK+VSEKKS   +  TD EP S P + Q+P+KRQRK +NP+RL
Sbjct: 61  KERKYTGLTKVKIIENLLKIVSEKKSSGHDIATDPEPHSFPENGQKPAKRQRKIENPSRL 120

Query: 120 PVPVTDAAMNNSGSDLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLT 179
            VP  +  +NNSG    N  YCKNSAC+ATL + D FCKRCSCCIC +YDDNKDPSLWL 
Sbjct: 121 AVPENNVFVNNSGDVNHNTSYCKNSACKATLNQGDAFCKRCSCCICHQYDDNKDPSLWLI 180

Query: 180 CSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQ 239
           CSSE PF G SCG+SCHLECALK++ SGIGKD      DG FYC+SC KVNDLLGCW+KQ
Sbjct: 181 CSSEAPFPGVSCGLSCHLECALKHDGSGIGKDGKRPKHDGGFYCVSCGKVNDLLGCWRKQ 240

Query: 240 LVVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGR 299
           L+VAK+ RRVDILCYR+SL QKL+  TE Y+ L +IVD+AVK LE EVGPLTG P+K+GR
Sbjct: 241 LMVAKDARRVDILCYRVSLSQKLLQGTEMYRELYEIVDEAVKKLEPEVGPLTGSPLKIGR 300

Query: 300 GIVNRLSSGPEVQKLCACAVESLDKMISNTI---LPNPSVQGSNVIVPNMVKFEDVRATS 356
           GIVNRLSSGPEVQKLC  A+ESLD M+S  I    PNP++Q ++++ PNMV+FEDV ATS
Sbjct: 301 GIVNRLSSGPEVQKLCGVALESLDSMLSKRISPLSPNPTIQDASLLAPNMVRFEDVTATS 360

Query: 357 LTVVLGSEDPSPGNIISYTLWHRRAHE-GFPARPTCTLFAPNTRFVVTGLCPATEYQFKV 415
           LTV+L SED S  N  SY +WHR+A +  +P  PTCT+  PN R  + GL P TEY+FK 
Sbjct: 361 LTVILCSEDASGENSASYAVWHRKADDVNYPLDPTCTILLPNRRLGIEGLLPDTEYRFKF 420

Query: 416 VSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPD 475
           V SN    L  CE+   T    DEV NCS  ERSQSP TN SSLSNPSSVEDETN+    
Sbjct: 421 V-SNDPRMLCACEVQVLTAHGEDEVPNCSATERSQSPVTNGSSLSNPSSVEDETNH---- 475

Query: 476 RDPNDAQVNNYYTYSKETDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGS 535
            D  D + +NY +Y K++D++A  NL +DA +C+ LG    P +A SL D++        
Sbjct: 476 SDQTDNRSDNYPSYHKDSDQLAPGNLSNDANNCSGLGGVGIPNNADSLSDKQADVGTTAI 535

Query: 536 MPDSHVQKLESKHPPEGRIIEEMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEIL 595
           +  S V KLE+KH  E ++ E+MST++G    VPTG ECVP + S + GLP TPCK+EI+
Sbjct: 536 IASSDVPKLENKHSQEEQVAEDMSTEDG---SVPTGRECVPLVGSSKGGLPNTPCKLEII 592

Query: 596 KDAQARNGRSKLNSKDMENGTGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVK 655
           KD + R GRSK + KD+ENG+G R+  +DGSTSKKRSSE +DE C AN  SD DFE+ VK
Sbjct: 593 KDGRGRKGRSKFSGKDLENGSGKRNVLRDGSTSKKRSSERQDEGCKANSFSDQDFEYYVK 652

Query: 656 VIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDC 715
           VIR LECEGHIE+NFRQKFLTWYSLRAT QE+RIVK++VDTF+ED ASLAEQL+DTFS+C
Sbjct: 653 VIRRLECEGHIEKNFRQKFLTWYSLRATSQEIRIVKIYVDTFLEDSASLAEQLVDTFSEC 712

Query: 716 ISSRRSSVVPAGFCMKLWH 734
           +S++RSS VPAGFCMKLWH
Sbjct: 713 VSNKRSS-VPAGFCMKLWH 730

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457169|ref|XP_004146321.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Cucumis sativus] gi|449502927|ref|XP_004161782.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Cucumis sativus]

 Score =  889 bits (2296), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/739 (58%), Positives = 564/739 (76%), Gaps = 7/739 (0%)

Query: 1   MDSSSLEGVALDPSKCSKLSMEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGK 60
           M S SL   AL+P K S +S+E+KR LVY++S Q H A E L+SW+RQEIL+ILCAE+GK
Sbjct: 1   MPSDSLSEAALEPLKSSMMSLEKKRNLVYEISDQPH-APELLQSWSRQEILEILCAEMGK 59

Query: 61  ERKYTGLTKLKIIENLLKLVSEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLP 120
           ERKYTGLTKLKIIENLLK+V +KKSG  E  TD++ QSSP  S   SKRQRK D PARLP
Sbjct: 60  ERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDNQSSPCPSPNISKRQRKIDQPARLP 119

Query: 121 VPVTDAAMNNSGSDLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTC 180
           VPV ++ ++N+ +D   A+YC+NSAC+A + ++D FCKRCSCCIC +YDDNKDPSLWL+C
Sbjct: 120 VPVNNSPISNTRTDSNIAVYCRNSACKANINQDDKFCKRCSCCICYQYDDNKDPSLWLSC 179

Query: 181 SSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQL 240
           SS+PPF   SC MSCHLECALK+E+SGI + +  +G++G+F C+SC KVNDL+GCW+KQL
Sbjct: 180 SSDPPFQSTSCRMSCHLECALKHEKSGISRGQ-QTGIEGTFCCVSCGKVNDLIGCWRKQL 238

Query: 241 VVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRG 300
           + AK TRRV ILCYR+SL +KL++  EK++++ +IVD+AVK LE EVGPL G+PV  GRG
Sbjct: 239 MKAKETRRVAILCYRISLSKKLLSEDEKFQDVYQIVDEAVKKLEAEVGPLAGVPVGTGRG 298

Query: 301 IVNRLSSGPEVQKLCACAVESLDKMISNTI---LPNPSVQGSNVIVPNMVKFEDVRATSL 357
           IVNRLSSGPEVQKLC+ A++SLD ++S  I   LP+  +Q +N++  N ++FEDV AT +
Sbjct: 299 IVNRLSSGPEVQKLCSLAIDSLDTLLSTKILHHLPSSMIQDTNLVATNFLRFEDVDATYV 358

Query: 358 TVVLGSEDPSPGNIISYTLWHRRAHE-GFPARPTCTLFAPNTRFVVTGLCPATEYQFKVV 416
            VV+G+ED S G  I Y LWHR+A E  +P  PTCTL  PN RFVV GL P++EY FK +
Sbjct: 359 AVVVGTEDVSCGETIGYRLWHRKAGETDYPIEPTCTLSQPNLRFVVRGLTPSSEYYFKAI 418

Query: 417 SSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDR 476
           S +GT +LG CE+  ST   R++  +C VIERSQSP TN S LSNPSSVEDETNN+ P  
Sbjct: 419 SFDGTGDLGTCEVQVSTAIPREDDASCLVIERSQSPVTNFSELSNPSSVEDETNNIVPCS 478

Query: 477 DPNDAQVNNYYTYSKETDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSM 536
           D  D+Q  ++ +Y KE++KI +TN  +D I+CT +    T  D+VS LDEE        +
Sbjct: 479 DQTDSQTGSFLSYCKESNKIITTNQSEDRINCTDVSGIGTAKDSVSSLDEEHVTRKSSML 538

Query: 537 PDSHVQKLESKHPPEGRIIEEMSTDN-GVDTPVPTGMECVPYMRSLEAGLPITPCKIEIL 595
           PD +V KLE +H  + +IIE  ++ N G ++ +  G +  P++ S EAGLP+TPCK+EIL
Sbjct: 539 PDPNVSKLEDRHSSQVQIIEGTTSMNKGSNSAIQQGTKSTPFVSSSEAGLPVTPCKMEIL 598

Query: 596 KDAQARNGRSKLNSKDMENGTGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVK 655
           KD   R+GRSK ++KD ++     +E ++GSTSKKR++E +D DCTANG+SD DFE+ VK
Sbjct: 599 KDVLGRSGRSKSSTKDRDDKGSGGEELRNGSTSKKRNAERQDVDCTANGISDKDFEYYVK 658

Query: 656 VIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDC 715
           +IRWLECEGHIE+NFRQKFLTWYSLRAT QEVRIVK FVD F+EDP++LAEQL+DTFS+C
Sbjct: 659 LIRWLECEGHIEKNFRQKFLTWYSLRATTQEVRIVKAFVDNFIEDPSALAEQLVDTFSEC 718

Query: 716 ISSRRSSVVPAGFCMKLWH 734
           ISS+++  VP+GFCMKLWH
Sbjct: 719 ISSKKTCAVPSGFCMKLWH 737

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224126067|ref|XP_002329653.1| predicted protein [Populus trichocarpa] gi|222870534|gb|EEF07665.1| predicted protein [Populus trichocarpa]

 Score =  875 bits (2260), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 462/730 (63%), Positives = 535/730 (73%), Gaps = 65/730 (8%)

Query: 19  LSMEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLK 78
           LSM EKRELVYQLSK    ASE L+SW+RQEILQILCAE+GKERKYTGLTKLKIIE+LLK
Sbjct: 1   LSMNEKRELVYQLSKWP-GASERLQSWSRQEILQILCAEMGKERKYTGLTKLKIIEHLLK 59

Query: 79  LVSEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLPVPVTDAAMNNSGSDLVNA 138
           LVSEKKSGE EA  D+E + S AS Q  SKRQRK DNP+R+PV ++  A NN  SD  N 
Sbjct: 60  LVSEKKSGECEASPDLETKISAASIQGASKRQRKTDNPSRVPVSLSCVATNNGISDQGNT 119

Query: 139 IYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLE 198
           +YCKNSACRATLR  D FCKRCSCCICR+YDDNKDPSLWL CSSEPPF G +C MSCHL+
Sbjct: 120 VYCKNSACRATLRPADTFCKRCSCCICRQYDDNKDPSLWLICSSEPPFQGVACSMSCHLD 179

Query: 199 CALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSL 258
           CALK E SGIGK+  +  LDGSF C SC KVNDLLGCW+KQL++AK+TRRVDILCYR+SL
Sbjct: 180 CALKQESSGIGKNGRHGRLDGSFCCFSCGKVNDLLGCWRKQLMMAKDTRRVDILCYRVSL 239

Query: 259 GQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACA 318
            QKL+N TEKY+ L +IV +A   LE EVGPL GLPVKMGRGIVNRLSSG EVQKLC  A
Sbjct: 240 SQKLLNGTEKYQKLLEIVGEAATKLEAEVGPLIGLPVKMGRGIVNRLSSGSEVQKLCTFA 299

Query: 319 VESLDKMISNTI---LPNPSVQG----------SNVIVPNMVKFEDVRATSLTVVLGSED 365
           +ESLDKM+SNTI   LP+P +QG          SN+I P  V FEDV +TSL +VLG ED
Sbjct: 300 LESLDKMLSNTISHPLPDPKMQGNHWCSHVSTDSNMIAPITVNFEDVHSTSLALVLGYED 359

Query: 366 PSPGNIISYTLWHRRAHE-GFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL 424
            S  +I+ YTLWHR+ H+  +PA PTC LF PNTR+VV GL PATEY FKVV  NG  EL
Sbjct: 360 SSADDIVGYTLWHRKGHDLDYPAEPTCRLFLPNTRYVVAGLSPATEYHFKVVPFNGVREL 419

Query: 425 GRCEIWFSTGSSRDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDRDPNDAQVN 484
           G CE+  STG +++EV N S++ERSQSP TNCSSLSNPSSVEDETNN  P  D    + +
Sbjct: 420 GTCEVQCSTGMTQEEVLNYSIVERSQSPNTNCSSLSNPSSVEDETNNNPPCNDQIVNRAD 479

Query: 485 NYYTYSKETDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDSHVQKL 544
           NY T  K++DKI S N  + A++ +      T ADA+ LLDEE A  +            
Sbjct: 480 NYRTCLKDSDKIVSANKSNGALNFS-----GTLADAIPLLDEEHATQV------------ 522

Query: 545 ESKHPPEGRIIEEMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEILKDAQARNGR 604
                        + TDNG D PV T MEC+P++ + EA LPITPCK+E+ KD Q RNGR
Sbjct: 523 -------------LITDNGSDAPVQTAMECMPFVSNSEASLPITPCKLEMHKDGQGRNGR 569

Query: 605 SKLNSKDMENGTGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKVIRWLECEG 664
            K + KD+ NG                    RDE+C ANG SD DFE+ VK+IRWLECEG
Sbjct: 570 FKSSDKDIVNG--------------------RDEECMANGNSDRDFEYYVKIIRWLECEG 609

Query: 665 HIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSRRSSVV 724
           HIE+NFRQKFLTWY LRAT QEVR+VK FVDTF+EDPASLAEQ++DTFS+CISSRRSSVV
Sbjct: 610 HIEKNFRQKFLTWYGLRATEQEVRVVKTFVDTFIEDPASLAEQIVDTFSECISSRRSSVV 669

Query: 725 PAGFCMKLWH 734
           P+GFCMKLWH
Sbjct: 670 PSGFCMKLWH 679

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297735403|emb|CBI17843.3| unnamed protein product [Vitis vinifera]

 Score =  863 bits (2230), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 448/738 (60%), Positives = 532/738 (72%), Gaps = 90/738 (12%)

Query: 1   MDSSSLEGVALDPSKCSKLSMEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGK 60
           MDSSS EG+  DPSK +KLSMEEKRELVY +SK S    E L+SW+RQEILQILCAE+GK
Sbjct: 1   MDSSS-EGIVYDPSKINKLSMEEKRELVYAVSKWSRGGPEMLQSWSRQEILQILCAEMGK 59

Query: 61  ERKYTGLTKLKIIENLLKLVSEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLP 120
           ERKYTGLTKLKIIE+LL++                             RQRK D+P+RLP
Sbjct: 60  ERKYTGLTKLKIIEHLLRV-----------------------------RQRKADHPSRLP 90

Query: 121 VPVTDAAMNNSGSDLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTC 180
           V   + +++N   DL NAIYCKN ACRA L +E  FCKRCSCCIC +YDDNKDPSLWLTC
Sbjct: 91  VAANNHSISNGDGDLGNAIYCKNLACRANLSREYEFCKRCSCCICHQYDDNKDPSLWLTC 150

Query: 181 SSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQL 240
           SS+PPF G SCGMSCHLECA K+E+SGI KD  +  LDGSFYC+SC KVND+LGCW+KQL
Sbjct: 151 SSDPPFQGVSCGMSCHLECAFKHEKSGIAKDGRHVRLDGSFYCVSCGKVNDMLGCWRKQL 210

Query: 241 VVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRG 300
           ++AK TRRVDILCYR+SL QKL+N T+KY+ L +IV++AVK LE EVGPLTGLPVK  RG
Sbjct: 211 MMAKETRRVDILCYRVSLSQKLLNGTKKYQKLYEIVEEAVKKLEAEVGPLTGLPVKTARG 270

Query: 301 IVNRLSSGPEVQKLCACAVESLDKMISNTI---LPNPSVQGSNVIVPNMVKFEDVRATSL 357
           IVNRLSSGPEVQ+LCA A+ESLD ++SN+     P P +Q + ++ P+ ++FEDV +TSL
Sbjct: 271 IVNRLSSGPEVQRLCALALESLDSVLSNSHPRPAPGPKIQDAGLVAPS-IRFEDVCSTSL 329

Query: 358 TVVLGSEDPSPGNIISYTLWHRRAHE-GFPARPTCTLFAPNTRFVVTGLCPATEYQFKVV 416
           TV+LGSED S  N+ISY LWHR++++  +PA P CT+ APN RF  + L P+TEY FKVV
Sbjct: 330 TVILGSEDSSTDNVISYKLWHRKSNDLEYPAEPACTMLAPNKRFTFSDLTPSTEYVFKVV 389

Query: 417 SSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDR 476
           S   T ELG  E+ FST SS D++    V ERSQSPATNCSSLSNPSSVEDETNNVTP  
Sbjct: 390 SFQDTRELGMGEVQFSTSSSGDDIPKSLVAERSQSPATNCSSLSNPSSVEDETNNVTPYH 449

Query: 477 DPNDAQVNNYYTYSKETDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSM 536
           D N+ + +NY                                D+V + D+ER   +  SM
Sbjct: 450 DQNENREDNY-------------------------------PDSVFVSDDERDLRVVVSM 478

Query: 537 PDSHVQKLESKHPPEGRIIEEMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEILK 596
           P   V K ++K   E +IIEEMSTD   +TPV TGMECVP++ S EAGLPITPCK+EI K
Sbjct: 479 P--KVLKPDNKTSLECQIIEEMSTDKEANTPVRTGMECVPFVGSSEAGLPITPCKLEIFK 536

Query: 597 DAQARNGRSKLNSKDMENGTGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKV 656
           D                      DEPQ GS+SKKRS+E +DE+C ANG SD DFE+ VKV
Sbjct: 537 D----------------------DEPQAGSSSKKRSAERQDEECAANGPSDRDFEYYVKV 574

Query: 657 IRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCI 716
           IRWLECEGH+E+NFRQKFLTWYSLRATPQEVRIVKVFVDT +EDPASLAEQL+DTFS+ I
Sbjct: 575 IRWLECEGHVEKNFRQKFLTWYSLRATPQEVRIVKVFVDTLIEDPASLAEQLIDTFSETI 634

Query: 717 SSRRSSVVPAGFCMKLWH 734
           SS+RSSVVPAGFCMKLWH
Sbjct: 635 SSKRSSVVPAGFCMKLWH 652

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|380710177|gb|AFD98847.1| vernalization insensitive 3 [Solanum lycopersicum]

 Score =  842 bits (2175), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/742 (57%), Positives = 536/742 (72%), Gaps = 11/742 (1%)

Query: 1   MDSSSLEGVALDPSKCSKLSMEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGK 60
           MD SS EG+ALDPSKCSKLSMEEKRELVY+LSKQSH A E L+SW+RQEILQILCAE+GK
Sbjct: 1   MDFSSFEGIALDPSKCSKLSMEEKRELVYELSKQSHGAPEMLQSWSRQEILQILCAEMGK 60

Query: 61  ERKYTGLTKLKIIENLLKLVSEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLP 120
           ERKYTGLTKLKIIENLLK+VSEKKS E+E  +++E Q S  S QR SKRQRK ++P+R P
Sbjct: 61  ERKYTGLTKLKIIENLLKIVSEKKSLEQENTSNLEMQPSSESGQRSSKRQRKAEHPSRFP 120

Query: 121 VPVTDAAMNNSGSDLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTC 180
           +    ++  N+   L N +YCKN ACRA L  +D FCKRCSCCICR YDDNKDPSLWL C
Sbjct: 121 IEANTSSTTNTNVSLANVVYCKNLACRAKLSGQDAFCKRCSCCICRNYDDNKDPSLWLIC 180

Query: 181 SSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQL 240
           SSEPPF GDSCGMSCHLECA+K+ +S I  D+   G +G+FYC+SC K NDLL   KKQL
Sbjct: 181 SSEPPFQGDSCGMSCHLECAMKHGKSCITTDKSDKGNNGTFYCVSCGKANDLLSSLKKQL 240

Query: 241 VVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRG 300
           +VA++TRRVDILCYRLSL QKL    E    L +++D+AV  LE +VGPLTGLPVKM RG
Sbjct: 241 IVARDTRRVDILCYRLSLSQKLSFGAENCPKLYEVLDEAVNKLEADVGPLTGLPVKMARG 300

Query: 301 IVNRLSSGPEVQKLCACAVESLDKMISNTILPNPS---VQGSNVIVPNMVKFEDVRATSL 357
           IVNRLS GP VQ+LC  AVE +D ++S  +   PS   V+   VI   +V+FEDV  +S+
Sbjct: 301 IVNRLSFGPAVQQLCGLAVEYIDALLSERVSEMPSNAKVKDCEVIESKLVRFEDVFPSSV 360

Query: 358 TVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVV 416
           TVVL SE  S  N++ Y+LWHR+A E  +P  PT TLF+PNTRFV++ L PAT+Y  K+V
Sbjct: 361 TVVLSSEGSSMENVVGYSLWHRKAVETEYPVEPTRTLFSPNTRFVLSDLMPATDYVLKIV 420

Query: 417 SSNGTTELGRCEIWFSTGSSRDEVTNCSV----IERSQSPATNCSSLSNPSSVEDETNNV 472
           S +   ELG  E+ F +  + +E++N ++    +ERSQSP TNCS+LSNPSSVEDETNN+
Sbjct: 421 SLDSKKELGMFEVQFCSSKAENELSNLNMKSLEVERSQSPPTNCSNLSNPSSVEDETNNI 480

Query: 473 TPDRDPNDAQVNNYYTYSKETDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNI 532
               +  + + +N  +    TDK  ST+LC   +              VSL DEE +   
Sbjct: 481 VLCSNEAENRGDNCLSCCDNTDKAISTDLCCTTVAFASKSHIGNEEVMVSLGDEEDSIVK 540

Query: 533 DGSMPDSHVQKLESKHPPEGRIIEEMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKI 592
             S+P++    LE+K   + +  EE STDNG + P+ T +E  P++ S++AGLPITPCK+
Sbjct: 541 VTSLPNTDAINLENKQCSDVQTTEETSTDNGSNAPLQTALEFAPFVGSVDAGLPITPCKM 600

Query: 593 EILKDAQARNGRSKLNSKDMENGTGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEH 652
           E +K +  R G+S+  SKD++NG+G  D PQ G +SKKR  E   E+C   G  D DFE+
Sbjct: 601 ENVKGSLGRKGKSEHCSKDLDNGSGKEDGPQVGCSSKKRVGEWH-EECAGTG--DKDFEY 657

Query: 653 CVKVIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTF 712
            VKV+RWLEC  HI++ FRQKFLTWYSLRATPQ+VRIVK FVDT +EDPASLA QL+DTF
Sbjct: 658 YVKVVRWLECGEHIDKTFRQKFLTWYSLRATPQDVRIVKAFVDTLIEDPASLAGQLVDTF 717

Query: 713 SDCISSRRSSVVPAGFCMKLWH 734
           SD ISS+R+SVVPAGFC+KLWH
Sbjct: 718 SDVISSKRASVVPAGFCLKLWH 739

Source: Solanum lycopersicum

Species: Solanum lycopersicum

Genus: Solanum

Family: Solanaceae

Order: Solanales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449507054|ref|XP_004162921.1| PREDICTED: protein VERNALIZATION INSENSITIVE 3-like [Cucumis sativus]

 Score =  828 bits (2140), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 433/735 (58%), Positives = 545/735 (74%), Gaps = 9/735 (1%)

Query: 4   SSLEGVALDPSKCSKLSMEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGKERK 63
           SS +G   D  KCSKL+M+EKRELV+++SK S+ ASETL+SW+RQ+ILQ+LCAE+GKERK
Sbjct: 5   SSCDGAIFDSPKCSKLTMQEKRELVHEISK-SNVASETLQSWSRQDILQVLCAEMGKERK 63

Query: 64  YTGLTKLKIIENLLKLVSEKKSGEREAKTDIEPQSSPASSQRPSKRQRKNDNPARLPVPV 123
           YTGLTK KII++LL+LVSEKKS   E   ++EPQ SP+   + +KRQRK+++ A+L VP 
Sbjct: 64  YTGLTKQKIIKHLLRLVSEKKSSVSEVLKNLEPQ-SPSGGHKITKRQRKSEHVAQLSVPA 122

Query: 124 TDAAMNNSGSDLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSE 183
           TD   ++S +DLV+   CKN ACRATL   D FC+RCSCCICR+YDDNKDPSLW++CS+E
Sbjct: 123 TDFPTSSSHNDLVSTACCKNLACRATLNPGDAFCRRCSCCICRQYDDNKDPSLWISCSAE 182

Query: 184 PPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVA 243
           PPF GDSC MSCHLECALK+ RSGI K     G+DGSFYC+SC K+NDLLGC +KQL+ A
Sbjct: 183 PPFQGDSCNMSCHLECALKDVRSGILKAGRSKGIDGSFYCVSCGKLNDLLGCCRKQLIHA 242

Query: 244 KNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVN 303
           K+TRRVDILCYR+SL QKL++ TEKYK L +IVD++V+ LE+EVGP+ G+PVKMGRGIVN
Sbjct: 243 KDTRRVDILCYRVSLSQKLLHGTEKYKVLYQIVDESVRKLEEEVGPIAGVPVKMGRGIVN 302

Query: 304 RLSSGPEVQKLCACAVESLDKMISNTIL---PNPSVQGSNVIVPNMVKFEDVRATSLTVV 360
           RLSSGPEVQKLCA A+E LD M+S+  L   PNP VQ +N +  NM++FEDV++TSLT+V
Sbjct: 303 RLSSGPEVQKLCASAIELLDSMVSSQSLHLSPNPDVQDANFVPANMIRFEDVKSTSLTLV 362

Query: 361 LGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN 419
           L  E+ S  N I +TLWHR+A +  +PA PTC L  P  R +V GL PAT+Y FK+V   
Sbjct: 363 LSYENGSSENQIGFTLWHRKADDADYPAEPTCILRQPKARCLVMGLSPATKYHFKIVQFE 422

Query: 420 GTTELGRCEIWFSTGSSRDEVTNCSVIERSQSPATNCSSLSNPSSVEDETNNVTPDRDPN 479
           GT EL   E+ FST    +E   C  IERSQS ATNCS LSNPSSVEDET ++ P  D  
Sbjct: 423 GTRELREFEVQFSTIGEVEENPGCLEIERSQSHATNCSDLSNPSSVEDETTDILPYGDRT 482

Query: 480 DAQVNNYYTYSKETDKIASTNLCDDAIDCTVLGRGTTPADAVSLLDEERANNIDGSMPDS 539
           +    N   YSK  + ++S  L  DA + +  G    PA  VS L+E  A  + G +P+S
Sbjct: 483 NNLGKNSPAYSKGIEILSSAILSTDAFNLSDNGEEGMPAGTVSALNEATAAGMVGLIPNS 542

Query: 540 HVQKLESKHPPEGRIIEEMSTDNGVDTPVPTGMECVPYMRSLEAGLPITPCKIEILKDAQ 599
              KLE++H P      +++TDN + T V +GM+   ++   + GLPITPCK+E+LKD+ 
Sbjct: 543 AGSKLENRHGPAA---PKLNTDNQLSTLVRSGMDGQQFVSCSQDGLPITPCKLEVLKDSL 599

Query: 600 ARNGRSKLNSKDMENGTGNRDEPQDGSTSKKRSSESRDEDCTANGLSDMDFEHCVKVIRW 659
            R  R K + KD EN T    EPQDG TSK R+ E +D+ C  NG+SD DFEH VKVIRW
Sbjct: 600 GRGERPKSSCKDQENRTRKGGEPQDGGTSKMRTGERQDDKCAENGVSDRDFEHYVKVIRW 659

Query: 660 LECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQLMDTFSDCISSR 719
           LEC+G+IE+NFRQKFLTWYSLRA+ QEV+IVKVFVDTF+EDPASLAEQL+DTFS+CISS+
Sbjct: 660 LECKGYIEKNFRQKFLTWYSLRASQQEVKIVKVFVDTFIEDPASLAEQLVDTFSECISSK 719

Query: 720 RSSVVPAGFCMKLWH 734
           + +  P GFCMKLWH
Sbjct: 720 KPTTTPPGFCMKLWH 734

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	734
TAIR|locus:2173004	620	VIN3 "VERNALIZATION INSENSITIV	0.441	0.522	0.495	1.9e-136
TAIR|locus:2128946	714	VEL1 "vernalization5/VIN3-like	0.801	0.823	0.435	1.9e-115
TAIR|locus:2044405	529	VEL2 "AT2G18880" [Arabidopsis	0.426	0.591	0.439	1e-103
TAIR|locus:2094859	602	VRN5 "AT3G24440" [Arabidopsis	0.376	0.458	0.426	1.5e-81
TAIR|locus:2044500	239	VEL3 "AT2G18870" [Arabidopsis	0.103	0.317	0.578	1.8e-18
TAIR|locus:2087403	1162	TTA2 "TITANIA 2" [Arabidopsis	0.193	0.122	0.246	1e-05
UNIPROTKB|Q84N38	549	PVIP "OBERON-like protein" [Ni	0.123	0.165	0.294	0.00011

TAIR|locus:2173004 VIN3 "VERNALIZATION INSENSITIVE 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 809 (289.8 bits), Expect = 1.9e-136, Sum P(3) = 1.9e-136
 Identities = 175/353 (49%), Positives = 227/353 (64%)

Query:   139 IYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLE 198
             I C+N ACRA L  +D FC+RCSCCIC+K+DDNKDPSLWLTC        D+CG SCHLE
Sbjct:   128 ICCENLACRAALGCDDTFCRRCSCCICQKFDDNKDPSLWLTC--------DACGSSCHLE 179

Query:   199 CALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSL 258
             C LK +R GIG D     LDG FYC  C K NDLLGCW+KQ+ VAK TRRVD+LCYRLSL
Sbjct:   180 CGLKQDRYGIGSD----DLDGRFYCAYCGKDNDLLGCWRKQVKVAKETRRVDVLCYRLSL 235

Query:   259 GQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSSGPEVQKLCACA 318
             GQKL+  T KY+NL +++D+AVK LE +VGPL+G  +KM RGIVNRLSSG  VQKLC+ A
Sbjct:   236 GQKLLRGTTKYRNLLELMDEAVKKLEGDVGPLSGWAMKMARGIVNRLSSGVHVQKLCSQA 295

Query:   319 VESLDKMISNTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGN---IISYT 375
             +E+LDK++S    P+ SV G    +   V+ E+++A S+TV + SE+PS      I  + 
Sbjct:   296 MEALDKVVS----PSESVSGQGDKMT--VRVEEIQARSVTVRVDSEEPSSSTQNKITGFR 349

Query:   376 LWHRRAH-EGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTG 434
             L+ R++  E   ++  C ++ P T   + GL P TE+  +VVS N   +L   E+ F+T 
Sbjct:   350 LFCRKSKDEECSSQGNCVVYLPETTSAIQGLEPDTEFCLRVVSFNEEGDLDESELRFTT- 408

Query:   435 SSRDEVTNCSVIERSQSPATNCSS--LSNPSSVEDETNNVTPDRDPNDAQVNN 485
               +D+          QSP TN SS   SNPS  EDE+NNV       +   +N
Sbjct:   409 -LKDDGDEAG---DQQSPLTNSSSGLCSNPSLPEDESNNVNKSCSKGNGDKDN 457

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009409 "response to cold" evidence=IEP

GO:0010048 "vernalization response" evidence=IEP

GO:0001666 "response to hypoxia" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2128946 VEL1 "vernalization5/VIN3-like 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1138 (405.7 bits), Expect = 1.9e-115, P = 1.9e-115
 Identities = 286/657 (43%), Positives = 378/657 (57%)

Query:     1 MDSSSLEGVALDPSKCSKLSMEEKRELVYQLSKQSHSASETLRSWTRQEILQILCAELGK 60
             MDSS L+G A D SKCS++S++EKR+LVY+LSKQSH A+E L++W+RQEILQILCAE+GK
Sbjct:     1 MDSS-LDGAAGDSSKCSEMSVDEKRQLVYELSKQSHLAAEVLQAWSRQEILQILCAEMGK 59

Query:    61 ERKYTGLTKLKIIENLLKLVSEKKSGEREAKTDIEXXXXXXXXXXXXXXXXXNDNPARLP 120
             ERKYTGLTK+KIIE LLK+VSEK SGE E K   +                  DNP+R  
Sbjct:    60 ERKYTGLTKVKIIETLLKIVSEKNSGECEGK---KRDSDCLPIQRNTKRQRKVDNPSRYV 116

Query:   121 VPVTDAAMNN--SGS-DLVNA------IYCKNSACRATLRKEDVFCKRCSCCICRKYDDN 171
             +P T+   +N  SGS   VN       IYCKN ACRA LR+ED FC+RCSCCICRKYDDN
Sbjct:   117 IPATNIVTSNNASGSCSSVNTKGESTTIYCKNLACRAVLRQEDSFCRRCSCCICRKYDDN 176

Query:   172 KDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVND 231
             KDPSLWLTCSS+PPF G+SCG SCHLECA   E+SG+GKD+   G    FYC+SC K N 
Sbjct:   177 KDPSLWLTCSSDPPFEGESCGFSCHLECAFNTEKSGLGKDKQSEGC--CFYCVSCGKANS 234

Query:   232 LLGCWKKQLVVAKNTRRVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLT 291
             LL CWKKQL +AK TRRV++LCYRL L QKL+ ++ KY+NL ++VD+AVK LE +VGPLT
Sbjct:   235 LLECWKKQLTIAKETRRVEVLCYRLFLVQKLLKSSTKYRNLCEVVDEAVKTLEADVGPLT 294

Query:   292 GLPVKMGRGIVNRLSSGPEVQKLCACAVESLDKMISN----TILPNPSV----QGSNVIV 343
             GLP+KMGRGIVNRL SGP+VQKLC+ A+ESL+ + +       LP+P      Q  + ++
Sbjct:   295 GLPMKMGRGIVNRLHSGPDVQKLCSSALESLETIATTPPDVAALPSPRSSKMQQDCSYVL 354

Query:   344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFA------PN 397
              N +  +   AT+ +  +  ED    N  S T+    A    P+ P    ++      P 
Sbjct:   355 SNEISADT--ATTGSTKIRFEDV---NATSLTVV--LASNEIPSPPNIVHYSIWHRKVPE 407

Query:   398 TRFVVTGLCPATEYQFKVVSSNGTTELGRC-EIWFSTGSSRDEVTNCSVIERSQSPATNC 456
               +     C       + V S        C ++   +G+    V   +V+ RS     NC
Sbjct:   408 KDYPEKSTCTLFIPNTRFVVSGLAPASEYCFKVVSYSGTREMGVDEINVLTRSAEEGANC 467

Query:   457 SSLSNPSSVEDETNNVTPDRDPN--DAQVNNYYTYSKE-TDKIASTNLCDDAIDCTVLGR 513
             SS     SV   TN  T   +P+  +A+ NN Y   K+ + K    N    ++D +   R
Sbjct:   468 SSAVE-RSVSPLTNCSTLSSNPSSVEAESNNDYIVPKKPSSKNEDNN--SPSVDESAAKR 524

Query:   514 --GTTPADAVSL-LDEERANNIDGSMPDSHVQKLESKHPPEGRIIEEMSTDNGVDTPVPT 570
                TT +D V +  D E+   +D    ++ + K ES+ P                  V T
Sbjct:   525 MKRTTDSDIVQIEKDVEQIVLLDDEEQEAVLDKTESETPV-----------------VVT 567

Query:   571 GMECVPYMRSLEAGLPITPCKIEILKDAQARNGRSKLNSKDMENGTGNRDEPQDGST 627
                 V    S +A LPITP + + +K+ QAR    +++ KD  N   N D   +G T
Sbjct:   568 TKSLVGNRNSSDASLPITPFRSDEIKNRQAR---IEISMKDNCN---NGDHSANGGT 618

GO:0005634 "nucleus" evidence=ISM

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA;IPI

GO:0031519 "PcG protein complex" evidence=IDA

GO:0035064 "methylated histone residue binding" evidence=IDA

GO:0048587 "regulation of short-day photoperiodism, flowering" evidence=IMP

GO:0009506 "plasmodesma" evidence=IDA

GO:0007155 "cell adhesion" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0016926 "protein desumoylation" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0050665 "hydrogen peroxide biosynthetic process" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

TAIR|locus:2044405 VEL2 "AT2G18880" [Arabidopsis thaliana (taxid:3702)]

 Score = 664 (238.8 bits), Expect = 1.0e-103, Sum P(3) = 1.0e-103
 Identities = 146/332 (43%), Positives = 204/332 (61%)

Query:   139 IYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLE 198
             +YC+N AC+  LR+E  FCKRCSCCIC KYDDNKDPSLWLTC+S+  F G+SCG+SCHL 
Sbjct:   117 MYCQNLACQNKLREEATFCKRCSCCICFKYDDNKDPSLWLTCNSDSQFDGESCGLSCHLN 176

Query:   199 CALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSL 258
             CA  +E+SG+ +D   S +DG F C+SC K N  + C KKQL++A   RRV + CYR+ L
Sbjct:   177 CAFDSEKSGLKEDTPSSDIDGCFNCVSCGKTNSKIECLKKQLIIANEERRVGVFCYRILL 236

Query:   259 GQKLVNATEKYKNLSKIVDDAVKMLEDEVG-PLTGLPVKMGRGIVNRLSSGPEVQKLCAC 317
               KL+  T+KY  +S+ V+ AV  L++E G P++ LP KM RG+VNRL    +V+K C+ 
Sbjct:   237 AHKLLKGTKKYIIVSEEVEKAVMHLKNEFGVPISCLPSKMSRGLVNRLCCAEKVKKHCSS 296

Query:   318 AVESLDKMISNTILPNPS-VQGSNVIVPNMVKFEDVRATSLTVVLGSEDP-SPGNIISYT 375
             A++ LD       LP PS +QGS  I     + E V ATS+T  + +E+  S G+   Y 
Sbjct:   297 ALKELDG------LPLPSTIQGSMKI-----RIESVLATSVTFDIEAEESFSWGDTNHYR 345

Query:   376 LWHRRAHEGFPARP-TCTLFAPNT--RFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFS 432
             + +R+  E   ++  T  LF+ ++  RF V  L PATEY FK+VS +G  EL   E   S
Sbjct:   346 MVYRKVSEKHSSKDLTRELFSTSSHQRFTVMELTPATEYWFKIVSFSGVEELSVDEFIVS 405

Query:   433 TGSSRDEVTNCSVIERSQSPATNCSSLSNPSS 464
             T + +DE    + +  + S   N + +    S
Sbjct:   406 TKTLQDE--EVAAVLLNMSNCNNANKMEKSGS 435

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2094859 VRN5 "AT3G24440" [Arabidopsis thaliana (taxid:3702)]

 Score = 578 (208.5 bits), Expect = 1.5e-81, Sum P(2) = 1.5e-81
 Identities = 127/298 (42%), Positives = 172/298 (57%)

Query:   128 MNNSGSDLVNAIYCKNSACRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFG 187
             ++  G  L ++  CKN++CRA + KED FCKRCSCC+C  +D+NKDPSLWL C  E    
Sbjct:    36 VDGGGGCLRSSWICKNASCRANVPKEDSFCKRCSCCVCHNFDENKDPSLWLVCEPEKSDD 95

Query:   188 GDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTR 247
              + CG+SCH+ECA +  + G+        LDG F C SC KV+ +LGCWKKQLV AK  R
Sbjct:    96 VEFCGLSCHIECAFREVKVGVIALGNLMKLDGCFCCYSCGKVSQILGCWKKQLVAAKEAR 155

Query:   248 RVDILCYRLSLGQKLVNATEKYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGRGIVNRLSS 307
             R D LCYR+ LG +L+N T ++  L +IV  A  MLEDEVGPL G   +  RGIV+RL  
Sbjct:   156 RRDGLCYRIDLGYRLLNGTSRFSELHEIVRAAKSMLEDEVGPLDGPTARTDRGIVSRLPV 215

Query:   308 GPEVQKLCACAVESLDKMISNTILPNPSVQGSNVIVPNMVKF--EDVRATSLTVVLGSED 365
                VQ+LC  A++   ++ +N         G + +VP   +F  ED+    +T+ L  E 
Sbjct:   216 AANVQELCTSAIKKAGELSANA--------GRD-LVPAACRFHFEDIAPKQVTLRL-IEL 265

Query:   366 PSPG--NIISYTLWHRRAHEGFPARPTCTLFAP----NTRFVVTGLCPATEYQFKVVS 417
             PS    ++  Y LW+ +  E     P   LF        R V++ L P TEY F+VVS
Sbjct:   266 PSAVEYDVKGYKLWYFKKGE----MPEDDLFVDCSRTERRMVISDLEPCTEYTFRVVS 319

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0009909 "regulation of flower development" evidence=IGI;RCA

GO:0010048 "vernalization response" evidence=IMP

GO:0016568 "chromatin modification" evidence=IMP

GO:0016571 "histone methylation" evidence=RCA;IMP

GO:0006306 "DNA methylation" evidence=RCA

GO:0006342 "chromatin silencing" evidence=RCA

GO:0009640 "photomorphogenesis" evidence=RCA

GO:0009793 "embryo development ending in seed dormancy" evidence=RCA

GO:0009845 "seed germination" evidence=RCA

GO:0009933 "meristem structural organization" evidence=RCA

GO:0010162 "seed dormancy process" evidence=RCA

GO:0010182 "sugar mediated signaling pathway" evidence=RCA

GO:0010228 "vegetative to reproductive phase transition of meristem" evidence=RCA

GO:0010388 "cullin deneddylation" evidence=RCA

GO:0016567 "protein ubiquitination" evidence=RCA

GO:0016572 "histone phosphorylation" evidence=RCA

GO:0016579 "protein deubiquitination" evidence=RCA

GO:0019915 "lipid storage" evidence=RCA

GO:0031047 "gene silencing by RNA" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

GO:0050826 "response to freezing" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

TAIR|locus:2044500 VEL3 "AT2G18870" [Arabidopsis thaliana (taxid:3702)]

 Score = 233 (87.1 bits), Expect = 1.8e-18, P = 1.8e-18
 Identities = 44/76 (57%), Positives = 56/76 (73%)

Query:   648 MDFEHCVKVIRWLECEGHIERNFRQKFLTWYSLRATPQEVRIVKVFVDTFVEDPASLAEQ 707
             +  E CVK+IR LEC G++E  FRQKFLTW+SLRAT QE   V  F++ F +D  +LAEQ
Sbjct:   142 LGLEQCVKIIRKLECSGYVESTFRQKFLTWFSLRATSQERNTVTTFMNAFNDDSMALAEQ 201

Query:   708 LMDTFSDCISSRRSSV 723
             L+DTFSDCI S+ S +
Sbjct:   202 LVDTFSDCIWSKGSVI 217

GO:0003674 "molecular_function" evidence=ND

GO:0005634 "nucleus" evidence=ISM

GO:0008150 "biological_process" evidence=ND

TAIR|locus:2087403 TTA2 "TITANIA 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 142 (55.0 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 39/158 (24%), Positives = 67/158 (42%)

Query:   146 CRATLRKEDVFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNE- 204
             CR   RK D FC  C C +C  +D   +   W+ C        D C   CH +C +K   
Sbjct:   823 CRVCSRK-DGFCSACMCLVCSNFDMASNTCSWVGC--------DVCLHWCHTDCGIKESY 873

Query:   205 -RSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQKLV 263
              R+GI         +  F+C++C   +++ G  K+  +      + +  C  L    K+ 
Sbjct:   874 IRNGINASGAPGMTEMQFHCVACNHPSEMFGFVKEVFLNFAREWKFERFCKELEYVNKIF 933

Query:   264 NATE--KYKNLSKIVDDAVKMLEDEVGPLTGLPVKMGR 299
             ++++  + K L +  D  +  L+ +   L GLP    R
Sbjct:   934 SSSKDSRGKQLRQAADAMLASLKSK---LIGLPEACNR 968

GO:0005634 "nucleus" evidence=ISM

GO:0005515 "protein binding" evidence=IPI

GO:0001708 "cell fate specification" evidence=IGI

GO:0009880 "embryonic pattern specification" evidence=IGI

GO:0090421 "embryonic meristem initiation" evidence=IGI

UNIPROTKB|Q84N38 PVIP "OBERON-like protein" [Nicotiana benthamiana (taxid:4100)]

 Score = 122 (48.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
 Identities = 33/112 (29%), Positives = 48/112 (42%)

Query:   141 CKNSACRATLRKEDV----------FCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDS 190
             C+N AC + L  E+           FC  C C IC K+D   +   W+ C        D 
Sbjct:   196 CRNIACGSMLPAEECSCEICAKKNGFCNLCMCVICYKFDFEVNSCRWIGC--------DL 247

Query:   191 CGMSCHLECALKNERSGIGKD--RCYSGLDGSFYCISCRKVNDLLGCWKKQL 240
             C    H +CA+ N + G G       S  +  F C +C + ++LLG W K +
Sbjct:   248 CSHWTHTDCAISNGQIGTGPSVKNGASSAETLFRCHACSRTSELLG-WVKDV 298

GO:0046740 "spread of virus in host, cell to cell" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.121.55.1 hypothetical protein (679 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	734
pfam07227	446	pfam07227, DUF1423, Protein of unknown function (D	4e-07
cd00063	93	cd00063, FN3, Fibronectin type 3 domain; One of th	5e-06
smart00060	83	smart00060, FN3, Fibronectin type 3 domain	2e-04
pfam00041	84	pfam00041, fn3, Fibronectin type III domain	2e-04

>gnl|CDD|219342 pfam07227, DUF1423, Protein of unknown function (DUF1423)

 Score = 52.8 bits (127), Expect = 4e-07
 Identities = 38/160 (23%), Positives = 68/160 (42%), Gaps = 26/160 (16%)

Query: 141 CKNSACRATLRKEDV----------FCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDS 190
           C+N AC++ L  +D           FC  C C +C K+D   +   W+ C        D 
Sbjct: 100 CRNIACQSLLPVDDCDCKICSNKKGFCSLCMCVVCSKFDFAVNTCRWVGC--------DV 151

Query: 191 CGMSCHLECALKNE--RSGIGKDRCYSGLDGSFYCISCRKVNDLLGCWKKQLVV--AKNT 246
           C   CH +CA+++   R G          +  F+C +C   +++ G + K +    A N 
Sbjct: 152 CSHWCHTDCAIRDGLIRPGPSLKGGSGTTEMQFHCRACNHTSEMFG-FVKDVFQHCAPNW 210

Query: 247 RRVDILCYRLSLGQKLVNATE--KYKNLSKIVDDAVKMLE 284
            R + L   L   +K+   +E  + K L    ++ ++ L+
Sbjct: 211 DR-ETLIKELDFVRKIFRGSEDARGKKLFWKCEELIEKLK 249

This family represents a conserved region approximately 500 residues long within a number of Arabidopsis thaliana proteins of unknown function. Length = 446

>gnl|CDD|238020 cd00063, FN3, Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin

 Score = 45.2 bits (107), Expect = 5e-06
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 1/77 (1%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  ++  DV +TS+T+     +   G I  Y + +R    G             T + +T
Sbjct: 4   PTNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKGSGDWKEVE-VTPGSETSYTLT 62

Query: 404 GLCPATEYQFKVVSSNG 420
           GL P TEY+F+V + NG
Sbjct: 63  GLKPGTEYEFRVRAVNG 79

Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases. Length = 93

>gnl|CDD|214495 smart00060, FN3, Fibronectin type 3 domain

 Score = 40.7 bits (95), Expect = 2e-04
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 5/79 (6%)

Query: 344 PNMVKFEDVRATSLTVVLGS-EDPSPGNIISYTL-WHRRAHEGFPARPTCTLFAPNTRFV 401
           P+ ++  DV +TS+T+   S E P    I  Y + +     E         +   +T + 
Sbjct: 4   PSNLRVTDVTSTSVTL---SWEPPPDDGITGYIVGYRVEYREEGSEWKEVNVTPSSTSYT 60

Query: 402 VTGLCPATEYQFKVVSSNG 420
           +TGL P TEY+F+V + NG
Sbjct: 61  LTGLKPGTEYEFRVRAVNG 79

One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins. Length = 83

>gnl|CDD|200951 pfam00041, fn3, Fibronectin type III domain

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)

Query: 347 VKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTG 404
           +   DV +TSLT+   S  P PGN  I  Y + +R  + G   +   T+    T + +TG
Sbjct: 6   LTVTDVTSTSLTL---SWSPPPGNGPITGYEVEYRPVNGGEEWK-EITVPGTTTSYTLTG 61

Query: 405 LCPATEYQFKVVSSNGTTE 423
           L P TEY+ +V + NG  E
Sbjct: 62  LKPGTEYEVRVQAVNGAGE 80

Length = 84

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	734
PF07227	446	DUF1423: Protein of unknown function (DUF1423); In	100.0
PF00041	85	fn3: Fibronectin type III domain; InterPro: IPR003	98.57
cd00063	93	FN3 Fibronectin type 3 domain; One of three types	97.97
smart00060	83	FN3 Fibronectin type 3 domain. One of three types	97.06
KOG4221	1381	consensus Receptor mediating netrin-dependent axon	95.67
PF09294	106	Interfer-bind: Interferon-alpha/beta receptor, fib	95.55
KOG4221	1381	consensus Receptor mediating netrin-dependent axon	94.33
KOG3513	1051	consensus Neural cell adhesion molecule L1 [Signal	94.23
smart00249	47	PHD PHD zinc finger. The plant homeodomain (PHD) f	93.83
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	93.24
KOG3513	1051	consensus Neural cell adhesion molecule L1 [Signal	85.22
PF00628	51	PHD: PHD-finger; InterPro: IPR019787 Zinc finger (	84.69
PF07498	43	Rho_N: Rho termination factor, N-terminal domain;	82.73

>PF07227 DUF1423: Protein of unknown function (DUF1423); InterPro: IPR004082 A total of 715 potential protein-coding genes have been identified in the nucleotide sequence of Arabidopsis thaliana chromosome 5, with an average gene density of 1 gene per 4001 bp []

Probab=100.00  E-value=2.2e-52  Score=450.10  Aligned_cols=152  Identities=39%  Similarity=0.770  Sum_probs=143.2

Q ss_pred             CCCCCccccccCccccccccCCc----------CCcCCceeeeeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhh
Q 004714          132 GSDLVNAIYCKNSACRATLRKED----------VFCKRCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECAL  201 (734)
Q Consensus       132 ~~~~~~~~~C~N~aCra~L~~ed----------~FCr~CsC~IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCAL  201 (734)
                      =.++|.+.+|||+||||+||++|          |||++||||||+|||+|+|||+||+||        +||||||+||||
T Consensus        91 LveiFl~~rCrN~aC~s~LP~ddc~C~iC~~~~gFC~~C~C~iC~kfD~~~n~~~Wi~Cd--------~CgH~cH~dCAL  162 (446)
T PF07227_consen   91 LVEIFLYKRCRNLACRSQLPVDDCDCKICCSEPGFCRRCMCCICSKFDDNKNTCSWIGCD--------VCGHWCHLDCAL  162 (446)
T ss_pred             HHHHHHHHhcCCHHhhccCCccccCcchhcCCCCccccCCccccCCcccCCCCeeEEecc--------CCCceehhhhhc
Confidence            35689999999999999999976          999999999999999999999999998        999999999999


Q ss_pred             hcccccccc--CCCccccceeEEeccCCCccchhHHHHHHHHHhhccccchhhhhhhhchhhhccccHH--HHHHHHHHH
Q 004714          202 KNERSGIGK--DRCYSGLDGSFYCISCRKVNDLLGCWKKQLVVAKNTRRVDILCYRLSLGQKLVNATEK--YKNLSKIVD  277 (734)
Q Consensus       202 r~~~~G~~~--~g~~~~lD~~f~C~~Cgk~sdLlg~w~Kql~~ake~rrvD~Lc~rL~l~~kll~GS~~--~k~L~~~ve  277 (734)
                      |+++||+|.  .|+.+++||+|||++|||+|||||||+++|.+|+++||+|+||+||++++|||+||++  ||+||++++
T Consensus       163 r~~~i~~G~s~~g~~g~~d~~f~C~~C~~~seLlG~vk~vf~~ca~~~~~d~L~~eL~l~~rIf~GSed~rgk~L~~~~e  242 (446)
T PF07227_consen  163 RHELIGTGPSVKGSIGTLDMQFHCRACGKTSELLGFVKKVFQTCAKAWRVDVLCKELDLVRRIFRGSEDYRGKELHEKVE  242 (446)
T ss_pred             ccccccCCccCCCCCccCceEEEccCCCChhhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhCccchhHHHHHHHHH
Confidence            999997765  4666889999999999999999999999999999999999999999999999999994  799999999


Q ss_pred             HHHHHhhhccCCCC
Q 004714          278 DAVKMLEDEVGPLT  291 (734)
Q Consensus       278 ~A~~KLe~evgpl~  291 (734)
                      +|++|||++++++.
T Consensus       243 ~al~KL~~~~~~~~  256 (446)
T PF07227_consen  243 EALAKLENGVIDSS  256 (446)
T ss_pred             HHHHHHhCCCCCHH
Confidence            99999999997653

Amongst the gene products is a well-conserved family of 130.7kDa proteins that share no sequence similarity with any other known proteins, other than in plants. The sequences are characterised by an N-terminal domain of variable length, a central cysteine-rich region and a relatively acidic C-terminal domain. The sequences may possess a PHD finger.

>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []

Probab=98.57  E-value=3.2e-07  Score=75.51  Aligned_cols=82  Identities=26%  Similarity=0.403  Sum_probs=67.8

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ++..+++.+++++||+|-+.........+.||.|.++..... .......+....+.++|.||.|.|.|.|||.+++..|
T Consensus         2 ~P~~l~v~~~~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~~~~g   80 (85)
T PF00041_consen    2 APENLSVSNISPTSVTVSWKPPSSGNGPITGYRVEYRSVNST-SDWQEVTVPGNETSYTITGLQPGTTYEFRVRAVNSDG   80 (85)
T ss_dssp             SSEEEEEEEECSSEEEEEEEESSSTSSSESEEEEEEEETTSS-SEEEEEEEETTSSEEEEESCCTTSEEEEEEEEEETTE
T ss_pred             cCcCeEEEECCCCEEEEEEECCCCCCCCeeEEEEEEEecccc-eeeeeeeeeeeeeeeeeccCCCCCEEEEEEEEEeCCc
Confidence            456799999999999999998875678899999999887664 1233445677777999999999999999999999888


Q ss_pred             cCcc
Q 004714          423 ELGR  426 (734)
Q Consensus       423 elg~  426 (734)
                       .|.
T Consensus        81 -~g~   83 (85)
T PF00041_consen   81 -EGP   83 (85)
T ss_dssp             -EEE
T ss_pred             -CcC
Confidence             544

They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....

>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin

Probab=97.97  E-value=7.8e-05  Score=59.44  Aligned_cols=72  Identities=31%  Similarity=0.465  Sum_probs=56.9

Q ss_pred             EEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeee---cCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          347 VKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLF---APNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       347 ~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~---~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      |++....+.++.|.+.........+.+|.|++++..+.    ....+.   ....++.|.+|.|.|.|.|+|.++...+
T Consensus         7 ~~~~~~~~~~~~v~W~~~~~~~~~~~~y~v~~~~~~~~----~~~~~~~~~~~~~~~~i~~l~p~~~Y~~~v~a~~~~~   81 (93)
T cd00063           7 LRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKGSG----DWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNGGG   81 (93)
T ss_pred             cEEEEecCCEEEEEECCCCCCCCcceeEEEEEeeCCCC----CCEEeeccCCcccEEEEccccCCCEEEEEEEEECCCc
Confidence            67888889999999988875446789999999987521    111222   3778999999999999999999998744

Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.

>smart00060 FN3 Fibronectin type 3 domain

Probab=97.06  E-value=0.0058  Score=47.08  Aligned_cols=74  Identities=28%  Similarity=0.385  Sum_probs=52.3

Q ss_pred             EEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecC-CceeEeecCCcceeeeEEEEeccCCc
Q 004714          347 VKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAP-NTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       347 ~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p-~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      +..+.+.+.++.|-.+..... .. .+|.+++.........+-..+...+ +.++.|.+|.|.|-|.|+|.+++..|
T Consensus         7 ~~~~~~~~~~~~v~W~~~~~~-~~-~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~v~v~a~~~~g   81 (83)
T smart00060        7 LRVTDVTSTSVTLSWEPPPDD-GI-TGYIVGYRVEYREEGSSWKEVNVTPSSTSYTLTGLKPGTEYEFRVRAVNGAG   81 (83)
T ss_pred             EEEEEEeCCEEEEEECCCCCC-CC-CccEEEEEEEEecCCCccEEEEecCCccEEEEeCcCCCCEEEEEEEEEcccC
Confidence            778888888899888733222 22 8999998877554211222222223 58999999999999999999988643

One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.

>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]

Probab=95.67  E-value=0.018  Score=70.85  Aligned_cols=76  Identities=21%  Similarity=0.305  Sum_probs=60.9

Q ss_pred             ceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCC-CCCCCceeeec-CCceeEeecCCcceeeeEEEEeccC
Q 004714          345 NMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEG-FPARPTCTLFA-PNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~-y~~ept~~~~~-p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      .-++.|-+.++||.|-+....+  .-..|+||++=||+...+ +-.   -++.. -.++.++.+|.|.|+|.|||-++|-
T Consensus       620 ~Nl~lev~sStsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~---~t~v~~n~~~~l~~~Lep~T~Y~vrIsa~t~  696 (1381)
T KOG4221|consen  620 QNLSLEVVSSTSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVN---ETVVKGNTTQYLFNGLEPNTQYRVRISAMTV  696 (1381)
T ss_pred             cceEEEecCCCeEEEEccCCCcccccceEEEEEEEecccCcccccc---eeecccchhhhHhhcCCCCceEEEEEEEecc
Confidence            3489999999999999998875  467899999999966554 221   24444 6788899999999999999999987


Q ss_pred             Ccc
Q 004714          421 TTE  423 (734)
Q Consensus       421 ~~e  423 (734)
                      -|.
T Consensus       697 nGt  699 (1381)
T KOG4221|consen  697 NGT  699 (1381)
T ss_pred             CCC
Confidence            553

>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology

Probab=95.55  E-value=0.031  Score=49.45  Aligned_cols=85  Identities=18%  Similarity=0.164  Sum_probs=56.9

Q ss_pred             CceEEEEEeeceeEEEEeCcCC---------CCCCCcce---EEEEeeecCCCCCCCCceeeecCCceeEeecCCcceee
Q 004714          344 PNMVKFEDVRATSLTVVLGSED---------PSPGNIIS---YTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEY  411 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~---------~s~~~i~G---y~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY  411 (734)
                      +..|.+ .+...+|.|.+....         .+..++-+   |+|-||+....   .-+-.+...++.++|.+|.|.|+|
T Consensus         5 PP~v~v-~~~~~~l~V~i~~P~~~~~~~~~~~~l~~~~~~~~Y~v~~~~~~~~---~~~~~~~~~~~~~~l~~L~p~t~Y   80 (106)
T PF09294_consen    5 PPSVNV-SSCGGSLHVTIKPPMTPLRAGGKNSSLRDIYPSLSYNVSYWKNGSN---EKKKEIETKNSSVTLSDLKPGTNY   80 (106)
T ss_dssp             SSEEEE-EEETTEEEEEEEESEEEEECSSSEEEHHHHHGG-EEEEEEEETTTS---CEEEEEESSSEEEEEES--TTSEE
T ss_pred             CCEEEE-EECCCEEEEEEECCCcccccCCCCCcHHHhCCCeEEEEEEEeCCCc---cceEEEeecCCEEEEeCCCCCCCE
Confidence            345777 788888888776654         12344544   99999998764   234466778889999999999999


Q ss_pred             eEEEEeccCCc-cCc-ceeeEEe
Q 004714          412 QFKVVSSNGTT-ELG-RCEIWFS  432 (734)
Q Consensus       412 ~fkvvsF~~~~-elg-~~E~k~~  432 (734)
                      +|+|-+|.... .-| .++.+|.
T Consensus        81 Cv~V~~~~~~~~~~s~~S~~~C~  103 (106)
T PF09294_consen   81 CVSVQAFSPSQNKNSQPSEPQCI  103 (106)
T ss_dssp             EEEEEEEECSSTEEEEEBSEEEE
T ss_pred             EEEEEEEeccCCCcCCCCCCEeE
Confidence            99999844322 222 3344554

They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....

>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]

Probab=94.33  E-value=0.16  Score=62.99  Aligned_cols=88  Identities=22%  Similarity=0.261  Sum_probs=65.3

Q ss_pred             EEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc-cCc
Q 004714          347 VKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT-ELG  425 (734)
Q Consensus       347 ~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~-elg  425 (734)
                      +.--...++++.|+.....--.+.|+||+|.|-..+..+  +  .-+-...+-..|.||.|-|||.|+||+|+..| -..
T Consensus       527 ~~a~ats~~ti~v~WepP~~~n~~I~~yk~~ys~~~~~~--~--~~~~~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~s  602 (1381)
T KOG4221|consen  527 LQAYATSPTTILVTWEPPPFGNGPITGYKLFYSEDDTGK--E--LRVENNATEYTINGLEKYTEYSIRVVAYNSAGSGVS  602 (1381)
T ss_pred             ccccccCcceEEEEecCCCCCCCCceEEEEEEEcCCCCc--e--EEEecCccEEEeecCCCccceEEEEEEecCCCCCCC
Confidence            444446677777777766545678999999998883321  0  11233466889999999999999999999988 567


Q ss_pred             ceeeEEecCcccc
Q 004714          426 RCEIWFSTGSSRD  438 (734)
Q Consensus       426 ~~E~k~~T~s~e~  438 (734)
                      ..++++.|.+..-
T Consensus       603 S~~i~V~Tlsd~P  615 (1381)
T KOG4221|consen  603 SADITVRTLSDVP  615 (1381)
T ss_pred             CCceEEEeccCCC
Confidence            8899999986543

>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]

Probab=94.23  E-value=0.19  Score=61.95  Aligned_cols=88  Identities=16%  Similarity=0.226  Sum_probs=74.1

Q ss_pred             CCcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 004714          339 SNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  418 (734)
Q Consensus       339 ~~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  418 (734)
                      -...++..+....++++.++|..+-..---+-++||.|=||+..+.|-..+...+....++..|+||.|-|-|.|.|-++
T Consensus       818 ~P~~ap~~~~~~~~s~s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~~~~~~~~~~i~~~~~~~~ltgL~~~T~Y~~~vrA~  897 (1051)
T KOG3513|consen  818 EPPVAPTKLSAKPLSSSEVNLSWKPPLWDNGKLTGYEVKYWKINEKEGSLSRVQIAGNRTSWRLTGLEPNTKYRFYVRAY  897 (1051)
T ss_pred             CCCCCCccceeecccCceEEEEecCcCccCCccceeEEEEEEcCCCcccccceeecCCcceEeeeCCCCCceEEEEEEEe
Confidence            33556677888899999999998655322378999999999999988777887788888999999999999999999999


Q ss_pred             cCCccCcce
Q 004714          419 NGTTELGRC  427 (734)
Q Consensus       419 ~~~~elg~~  427 (734)
                      |..| .|..
T Consensus       898 nsaG-~Gp~  905 (1051)
T KOG3513|consen  898 TSAG-GGPA  905 (1051)
T ss_pred             cCCC-CCCC
Confidence            9999 7744

>smart00249 PHD PHD zinc finger

Probab=93.83  E-value=0.062  Score=40.16  Aligned_cols=46  Identities=33%  Similarity=0.681  Sum_probs=34.9

Q ss_pred             eeeeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccccceeEEeccC
Q 004714          162 CCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISC  226 (734)
Q Consensus       162 C~IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~C  226 (734)
                      |.+|.+.+   ++-.||.|+        .|..|-|+.|+=....        .......|+|..|
T Consensus         2 C~~C~~~~---~~~~~i~C~--------~C~~~~H~~C~~~~~~--------~~~~~~~~~C~~C   47 (47)
T smart00249        2 CSVCGKPD---DGGELLQCD--------GCDRWYHQTCLGPPLL--------EEEPDGKWYCPKC   47 (47)
T ss_pred             cccCCCcC---CCCCEEECC--------CCCchhhhhhCCCccc--------CCCCCCCEECcCC
Confidence            67888876   678899999        9999999999633222        1335668899877

The plant homeodomain (PHD) finger is a C4HC3 zinc-finger-like motif found in nuclear proteins thought to be involved in epigenetics and chromatin-mediated transcriptional regulation. The PHD finger binds two zinc ions using the so-called 'cross-brace' motif and is thus structurally related to the

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=93.24  E-value=0.28  Score=59.06  Aligned_cols=88  Identities=23%  Similarity=0.295  Sum_probs=70.6

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc--
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT--  422 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~--  422 (734)
                      .-+|.+.++++||++-+...+.....|.-|-|=|+...+.  +.--.++..+.++..|.+|.|.|.|.|+|=+.|..|  
T Consensus       447 ~~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~--e~~~~~~~t~~~~~ti~gL~p~t~YvfqVRarT~aG~G  524 (996)
T KOG0196|consen  447 SVLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDED--ERSYSTLKTKTTTATITGLKPGTVYVFQVRARTAAGYG  524 (996)
T ss_pred             ceEEEeeeccCceEEecCCCCCCCCcceeEEEEEeecccc--ccceeEEecccceEEeeccCCCcEEEEEEEEecccCCC
Confidence            4699999999999999999997777799999988887643  112236777889999999999999999999999865  


Q ss_pred             cCc-ceeeEEecC
Q 004714          423 ELG-RCEIWFSTG  434 (734)
Q Consensus       423 elg-~~E~k~~T~  434 (734)
                      -|+ ..|++..+.
T Consensus       525 ~~S~~~~fqT~~~  537 (996)
T KOG0196|consen  525 PYSGKHEFQTLPS  537 (996)
T ss_pred             CCCCceeeeecCc
Confidence            333 556666654

>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]

Probab=85.22  E-value=2.3  Score=52.84  Aligned_cols=85  Identities=28%  Similarity=0.342  Sum_probs=57.4

Q ss_pred             CCCCCcccCceEEEEEeeceeEEEEeCcCC-CCCCCcceEEEEeeecCCC-CCCCCceeeecCCc---eeEeecCCccee
Q 004714          336 VQGSNVIVPNMVKFEDVRATSLTVVLGSED-PSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNT---RFVVTGLCPATE  410 (734)
Q Consensus       336 ~q~~~l~~~~~~rFE~vt~tSv~vvL~~~~-~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~---r~~vs~L~P~TE  410 (734)
                      +++...|+. .+..++|+++++.|-..-.. .-+. |.+|.+=.|-..-. .-. -+ +++--.+   ...|-||.|=+|
T Consensus       611 V~gpPgpP~-~v~~~~i~~t~~~lsW~~g~dn~Sp-I~~Y~iq~rt~~~~~W~~-v~-~vp~~~~~~~sa~vv~L~Pwv~  686 (1051)
T KOG3513|consen  611 VRGPPGPPP-DVHVDDISDTTARLSWSPGSDNNSP-IEKYTIQFRTPFPGKWKA-VT-TVPGNITGDESATVVNLSPWVE  686 (1051)
T ss_pred             EecCCCCCC-ceeEeeeccceEEEEeecCCCCCCC-ceEEeEEecCCCCCcceE-ee-ECCCcccCccceeEEccCCCcc
Confidence            344333333 79999999999999888775 3234 99999866654332 111 11 2222222   477899999999


Q ss_pred             eeEEEEeccCCccC
Q 004714          411 YQFKVVSSNGTTEL  424 (734)
Q Consensus       411 Y~fkvvsF~~~~el  424 (734)
                      |.|||++++..|.=
T Consensus       687 YeFRV~AvN~iG~g  700 (1051)
T KOG3513|consen  687 YEFRVVAVNSIGIG  700 (1051)
T ss_pred             eEEEEEEEcccccC
Confidence            99999999987643

>PF00628 PHD: PHD-finger; InterPro: IPR019787 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=84.69  E-value=0.18  Score=39.80  Aligned_cols=48  Identities=31%  Similarity=0.719  Sum_probs=34.6

Q ss_pred             eeeeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccccceeEEeccCC
Q 004714          162 CCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCR  227 (734)
Q Consensus       162 C~IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~Cg  227 (734)
                      |.||.+   ..+...||.|+        .|+.|-|+.|.--....-..       .+..|+|..|-
T Consensus         2 C~vC~~---~~~~~~~i~C~--------~C~~~~H~~C~~~~~~~~~~-------~~~~w~C~~C~   49 (51)
T PF00628_consen    2 CPVCGQ---SDDDGDMIQCD--------SCNRWYHQECVGPPEKAEEI-------PSGDWYCPNCR   49 (51)
T ss_dssp             BTTTTS---SCTTSSEEEBS--------TTSCEEETTTSTSSHSHHSH-------HSSSBSSHHHH
T ss_pred             CcCCCC---cCCCCCeEEcC--------CCChhhCcccCCCChhhccC-------CCCcEECcCCc
Confidence            678888   45588999999        99999999997554442222       22278887763

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents the PHD (homeodomain) zinc finger domain [,], which is a C4HC3 zinc-finger-like motif found in nuclear proteins thought to be involved in chromatin-mediated transcriptional regulation. The PHD finger motif is reminiscent of, but distinct from the C3HC4 type RING finger. The function of this domain is not yet known but in analogy with the LIM domain it could be involved in protein-protein interaction and be important for the assembly or activity of multicomponent complexes involved in transcriptional activation or repression. Alternatively, the interactions could be intra-molecular and be important in maintaining the structural integrity of the protein. In similarity to the RING finger and the LIM domain, the PHD finger is thought to bind two zinc ions. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0005515 protein binding; PDB: 3ZVY_A 2LGG_A 3SOW_A 3SOU_B 3ASL_A 3ASK_A 3ZVZ_B 3T6R_A 2LGK_A 3SOX_B ....

>PF07498 Rho_N: Rho termination factor, N-terminal domain; InterPro: IPR011112 The Rho termination factor disengages newly transcribed RNA from its DNA template at certain, specific transcripts

Probab=82.73  E-value=2.1  Score=33.87  Aligned_cols=39  Identities=36%  Similarity=0.514  Sum_probs=32.1

Q ss_pred             hchhcHHHHHHHHHHHhCCcccccCcchHHHHHHHHHhhcc
Q 004714           42 LRSWTRQEILQILCAELGKERKYTGLTKLKIIENLLKLVSE   82 (734)
Q Consensus        42 LqswsR~Eil~ilCAe~gkERKytgltK~k~ie~Llk~vs~   82 (734)
                      |+++|..||.+ |+.++|-+ .|+++.|..+|..|++.-++
T Consensus         2 L~~~~~~eL~~-iAk~lgI~-~~~~~~K~eLI~~Il~~q~~   40 (43)
T PF07498_consen    2 LKSMTLSELRE-IAKELGIE-GYSKMRKQELIFAILKAQAE   40 (43)
T ss_dssp             HHCS-HHHHHH-HHHCTT-T-TGCCS-HHHHHHHHHHHHCT
T ss_pred             cccCCHHHHHH-HHHHcCCC-CCCcCCHHHHHHHHHHHHHH
Confidence            78889999988 89999998 58999999999999998874

It is thought that two copies of Rho bind to RNA and that Rho functions as a hexamer of protomers []. This domain is found to the N terminus of the RNA binding domain (IPR011113 from INTERPRO).; GO: 0006353 transcription termination, DNA-dependent; PDB: 1A8V_B 1PVO_A 1PV4_D 3ICE_A 1XPU_C 1XPO_D 1XPR_F 2A8V_B 2HT1_B 1A63_A ....

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	734
3b83_A	100	Ten-D3; beta sheet, computational redesigned prote	9e-10
2ocf_D	121	Fibronectin; estrogen receptor, LBD, monobody, est	1e-09
1j8k_A	94	Fibronectin; EDA, TYPEIII domain, protein binding;	1e-09
3teu_A	98	Fibcon; FN3 domain, fibronectin TPYE III domain, c	2e-09
2rb8_A	104	Tenascin; beta sheet,loop design, alternative spli	1e-08
3tes_A	98	Tencon; fibronectin type III domain, FN3, consensu	2e-08
2ekj_A	105	Collagen alpha-1(XX) chain; KIAA1510, structural g	3e-08
2ee3_A	108	Collagen alpha-1(XX) chain; KIAA1510, structural g	3e-08
3qht_C	97	Monobody YSMB-1; fibronectin type III, yeast small	5e-08
3qwq_B	114	Adnectin; cell surface receptor, tyrosine kinase,	6e-08
1x5f_A	120	Neogenin; RGM binding, fibronectin type III domain	9e-08
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	1e-07
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	6e-07
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	9e-06
2yrz_A	118	Integrin beta-4; GP150, CD104 antigen, structural	2e-07
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	2e-07
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	3e-06
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	2e-07
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	1e-06
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	5e-05
2cuh_A	115	Tenascin-X; fibronectin type III domain, extracell	2e-07
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	3e-07
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	1e-05
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	3e-07
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	4e-07
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	1e-05
2cum_A	105	Tenascin-X; hexabrachion-like, fibronectin type II	5e-07
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	5e-07
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	2e-06
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	2e-06
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	3e-05
2h41_A	95	Fibronectin; beta sandwich, cell adhesion, structu	6e-07
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	8e-07
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	1e-06
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	3e-06
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	1e-05
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	2e-06
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	3e-06
3k2m_C	101	Monobody HA4; engineered binding protein, antibody	3e-06
2dju_A	106	Receptor-type tyrosine-protein phosphatase F; LAR	4e-06
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	4e-06
3t04_D	103	Monobody 7C12; engineered binding protein, antibod	5e-06
2e7h_A	109	Ephrin type-B receptor 4; FN3 domain, tyrosine- pr	5e-06
2kbg_A	114	N-CAM 2, neural cell adhesion molecule 2; fibronec	6e-06
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	7e-06
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	8e-06
2haz_A	105	N-CAM 1, neural cell adhesion molecule 1; fibronec	8e-06
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	8e-06
1uey_A	127	KIAA0343 protein; immunoglobulin-like beta-sandwic	1e-05
2db8_A	110	Tripartite motif protein 9, isoform 2; ring finger	1e-05
1x3d_A	118	Fibronectin type-III domain containing protein 3A;	1e-05
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	2e-05
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	4e-05
2cui_A	112	Tenascin-X; fibronectin type III domain, extracell	2e-05
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	2e-05
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	2e-05
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	9e-05
2edb_A	116	Netrin receptor DCC; tumor suppressor protein DCC,	2e-05
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	3e-05
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	1e-04
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	3e-05
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	3e-05
2yuw_A	110	Myosin binding protein C, SLOW type; fibronectin I	3e-05
1x5x_A	109	Fibronectin type-III domain containing protein 3A;	3e-05
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	4e-05
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	5e-05
2dkm_A	104	Collagen alpha-1(XX) chain; FN3 domain, KIAA1510,	6e-05
2djs_A	108	Ephrin type-B receptor 1; tyrosine-protein kinase	7e-05
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	8e-05
1wfu_A	120	Unnamed protein product; FN3 domain, similar to 17	9e-05
2dlh_A	121	Receptor-type tyrosine-protein phosphatase delta;	1e-04
2ic2_A	115	CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t	1e-04
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	1e-04
1x4z_A	121	Biregional cell adhesion molecule-related/DOWN- re	1e-04
1x5y_A	111	Myosin binding protein C, fast-type; fast MYBP-C,	1e-04
1x5a_A	107	Ephrin type-A receptor 1; tyrosine-protein kinase	2e-04
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	2e-04
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	2e-04
1x5j_A	113	Neogenin; RGM binding, fibronectin type III domain	3e-04
1wf5_A	121	Sidekick 2 protein; FNIII domain, structural genom	3e-04
1wis_A	124	KIAA1514 protein; FNIII domain, sidekick-2, struct	3e-04
2edd_A	123	Netrin receptor DCC; tumor suppressor protein DCC,	4e-04
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	4e-04
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	4e-04
1x5i_A	126	Neogenin; RGM binding, fibronectin type III domain	5e-04
2edy_A	103	Receptor-type tyrosine-protein phosphatase F; LAR	7e-04
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	9e-04

>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens} Length = 100

 Score = 55.5 bits (134), Expect = 9e-10
 Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 4/94 (4%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  +K  ++  T+  V   +  P    I    +             T  L +  T   +T
Sbjct: 5   PFNIKVTNITLTTAVV---TWQPPILPIEGILV-TFGRKNDPSDETTVDLTSSITSLTLT 60

Query: 404 GLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSR 437
            L P T Y+ ++V+ NG          F+TGS  
Sbjct: 61  NLEPNTTYEIRIVARNGQQYSPPVSTTFTTGSLE 94

>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens} Length = 121

 Score = 55.7 bits (134), Expect = 1e-09
 Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 4/90 (4%)

Query: 332 PNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTC 391
            N   QGS   VP  ++      TSL +   S D     +  Y + +       P +   
Sbjct: 20  ENLYFQGSVSDVPTKLEVVAATPTSLLI---SWDAPAVTVRYYRITYGETGGNSPVQ-EF 75

Query: 392 TLFAPNTRFVVTGLCPATEYQFKVVSSNGT 421
           T+    +   ++GL P  +Y   V +  G 
Sbjct: 76  TVPGSKSTATISGLKPGVDYTITVYAVTGL 105

>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 94

 Score = 54.7 bits (132), Expect = 1e-09
 Identities = 16/80 (20%), Positives = 29/80 (36%), Gaps = 4/80 (5%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  + F DV   S+ +   + +   G +  Y + +    +G                 + 
Sbjct: 5   PKGLAFTDVDVDSIKI---AWESPQGQVSRYRVTYSSPEDGIH-ELFPAPDGEEDTAELQ 60

Query: 404 GLCPATEYQFKVVSSNGTTE 423
           GL P +EY   VV+ +   E
Sbjct: 61  GLRPGSEYTVSVVALHDDME 80

>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic} Length = 98

 Score = 54.0 bits (130), Expect = 2e-09
 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 4/77 (5%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  ++  +V  TS+TV   S  P    I  Y + +  ++ G       T+   +T   +T
Sbjct: 5   PTDLQVTNVTDTSITV---SWTPPSATITGYRITYTPSN-GPGEPKELTVPPSSTSVTIT 60

Query: 404 GLCPATEYQFKVVSSNG 420
           GL P  EY   V +   
Sbjct: 61  GLTPGVEYVVSVYALKD 77

>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A Length = 104

 Score = 52.4 bits (126), Expect = 1e-08
 Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 4/91 (4%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P+ ++ +DV  T+  +   +  P    +  + L +           T  L     ++ + 
Sbjct: 6   PSQIEVKDVTDTTALI---TWMPPSQPVDGFELTYGIKDVPGDRT-TIDLTEDENQYSIG 61

Query: 404 GLCPATEYQFKVVSSNGTTELGRCEIWFSTG 434
            L P TEY+  ++S  G       +  F+TG
Sbjct: 62  NLKPDTEYEVSLISRRGDMSSNPAKETFTTG 92

>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} Length = 98

 Score = 51.3 bits (123), Expect = 2e-08
 Identities = 19/94 (20%), Positives = 33/94 (35%), Gaps = 4/94 (4%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  +   +V   SL +   S         S+ + ++ + +   A    T+      + +T
Sbjct: 5   PKNLVVSEVTEDSLRL---SWTAPDAAFDSFMIQYQESEKVGEAINL-TVPGSERSYDLT 60

Query: 404 GLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSR 437
           GL P TEY   +    G          F+TG   
Sbjct: 61  GLKPGTEYTVSIYGVKGGHRSNPLSAEFTTGGHH 94

>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 105

 Score = 51.3 bits (123), Expect = 3e-08
 Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 4/77 (5%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P+ +        SL V   S  P  G ++ Y L +  A    P +   ++    +   + 
Sbjct: 11  PSNLALASETPDSLQV---SWTPPLGRVLHYWLTYAPASGLGPEKSV-SVPGARSHVTLP 66

Query: 404 GLCPATEYQFKVVSSNG 420
            L  AT+Y+  V +   
Sbjct: 67  DLQAATKYRVLVSAIYA 83

>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 108

 Score = 51.3 bits (123), Expect = 3e-08
 Identities = 12/80 (15%), Positives = 24/80 (30%), Gaps = 5/80 (6%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  + F DV   +  V     + +P  +    + +  +  G             T  ++ 
Sbjct: 11  PRHLGFSDVSHDAARV---FWEGAPRPVRLVRVTYVSSEGGHS--GQTEAPGNATSAMLG 65

Query: 404 GLCPATEYQFKVVSSNGTTE 423
            L  +T Y  +V        
Sbjct: 66  PLSSSTTYTVRVTCLYPGGG 85

>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene} Length = 97

 Score = 50.1 bits (120), Expect = 5e-08
 Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 4/78 (5%)

Query: 343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 402
           VP  ++      TSL +   S D S  ++  Y + +       P +   T+   ++   +
Sbjct: 7   VPTKLEVVAATPTSLLI---SWDASSSSVSYYRITYGETGGNSPVQEF-TVPGSSSTATI 62

Query: 403 TGLCPATEYQFKVVSSNG 420
           +GL P  +Y   V +   
Sbjct: 63  SGLSPGVDYTITVYAYYS 80

>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D* Length = 114

 Score = 50.7 bits (121), Expect = 6e-08
 Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 4/83 (4%)

Query: 343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 402
           VP  ++      TSL +   S D   G+   Y + +       P +   T+  P     +
Sbjct: 6   VPRDLEVVAATPTSLLI---SWDSGRGSYQYYRITYGETGGNSPVQEF-TVPGPVHTATI 61

Query: 403 TGLCPATEYQFKVVSSNGTTELG 425
           +GL P  +Y   V +        
Sbjct: 62  SGLKPGVDYTITVYAVTDHKPHA 84

>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 120

 Score = 50.1 bits (120), Expect = 9e-08
 Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 344 PNMVKFEDVRATSLTV--VLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFV 401
           P  V    V    + +     + DP  G+ ++Y++++ +       R   T      +  
Sbjct: 21  PRDVVASLVSTRFIKLTWRTPASDP-HGDNLTYSVFYTKEGIA-RERVENTSHPGEMQVT 78

Query: 402 VTGLCPATEYQFKVVSSN 419
           +  L PAT Y F+V++ N
Sbjct: 79  IQNLMPATVYIFRVMAQN 96

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290

 Score = 52.9 bits (127), Expect = 1e-07
 Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 4/77 (5%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P+ ++F      SL V   S  P    I  Y + + +     P           T   +T
Sbjct: 205 PSNLRFLATTPNSLLV---SWQPPRARITGYIIKYEKP-GSPPREVVPRPRPGVTEATIT 260

Query: 404 GLCPATEYQFKVVSSNG 420
           GL P TEY   V++   
Sbjct: 261 GLEPGTEYTIYVIALKN 277

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290

 Score = 51.0 bits (122), Expect = 6e-07
 Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  +KF  V  TSL+       P    +  Y +      +  P      L   ++  VV+
Sbjct: 24  PTDLKFTQVTPTSLSA---QWTPPNVQLTGYRVRVTPKEKTGP-MKEINLAPDSSSVVVS 79

Query: 404 GLCPATEYQFKVVSSNG 420
           GL  AT+Y+  V +   
Sbjct: 80  GLMVATKYEVSVYALKD 96

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A Length = 290

 Score = 47.1 bits (112), Expect = 9e-06
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 5/77 (6%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P   +  D   T++T+   S       I  + +    A+   P + T         + +T
Sbjct: 116 PRRARVTDATETTITI---SWRTKTETITGFQVDAVPANGQTPIQRTIK--PDVRSYTIT 170

Query: 404 GLCPATEYQFKVVSSNG 420
           GL P T+Y+  + + N 
Sbjct: 171 GLQPGTDYKIYLYTLND 187

>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 118

 Score = 49.3 bits (118), Expect = 2e-07
 Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 6/78 (7%)

Query: 344 PNMVKFEDVRATSLTVVLGS--EDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFV 401
           P  + F  +  TSL V   S  E      +  Y++ ++  + G             T  V
Sbjct: 21  PTRLVFSALGPTSLRV---SWQEPRCERPLQGYSVEYQLLNGG-ELHRLNIPNPAQTSVV 76

Query: 402 VTGLCPATEYQFKVVSSN 419
           V  L P   Y F+V + +
Sbjct: 77  VEDLLPNHSYVFRVRAQS 94

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} Length = 201

 Score = 51.2 bits (122), Expect = 2e-07
 Identities = 14/119 (11%), Positives = 32/119 (26%), Gaps = 7/119 (5%)

Query: 302 VNRLSSGPEVQKLCACAVESLDKMISNTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVL 361
           + +       +        S     +               V       ++ A+S  V  
Sbjct: 76  IQQYGHQEVTRFDFTTTSTSTPVTSNTVTGETTPFSPL---VATSESVTEITASSFVV-- 130

Query: 362 GSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG 420
            S   +   +  + + +  + EG   +    L +  T   +  L P  +Y   V   + 
Sbjct: 131 -SWVSASDTVSGFRVEYELSEEGDEPQYL-DLPSTATSVNIPDLLPGRKYIVNVYQISE 187

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens} Length = 201

 Score = 47.7 bits (113), Expect = 3e-06
 Identities = 25/159 (15%), Positives = 50/159 (31%), Gaps = 18/159 (11%)

Query: 343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 402
           V   +     +  S  +   +  P P +I  Y L  R  +     +   T+      + +
Sbjct: 4   VEVFITETPSQPNSHPIQWNA--PQPSHISKYILRWRPKNSVGRWK-EATIPGHLNSYTI 60

Query: 403 TGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQSPATNCSSLSNP 462
            GL P   Y+ +++S             F+T S+   VT         +  T  ++  +P
Sbjct: 61  KGLKPGVVYEGQLISIQQYGHQEVTRFDFTTTSTSTPVT--------SNTVTGETTPFSP 112

Query: 463 SSVEDET-NNVTPDR-----DPNDAQVNNYY-TYSKETD 494
                E+   +T              V+ +   Y    +
Sbjct: 113 LVATSESVTEITASSFVVSWVSASDTVSGFRVEYELSEE 151

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283

 Score = 52.1 bits (125), Expect = 2e-07
 Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 6/80 (7%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  +       TS+++       + G I  Y +    +          T+    T + +T
Sbjct: 200 PRDLMVTASSETSISL---IWTKASGPIDHYRITFTPSSGI---SSEVTVPRDRTSYTLT 253

Query: 404 GLCPATEYQFKVVSSNGTTE 423
            L P  EY   + +  G  +
Sbjct: 254 DLEPGAEYIISITAERGRQQ 273

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283

 Score = 49.8 bits (119), Expect = 1e-06
 Identities = 24/108 (22%), Positives = 38/108 (35%), Gaps = 6/108 (5%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  +   DV  T   V      P    +    L +     G   + T  L  P +++ V 
Sbjct: 18  PTQILVRDVSDTVAFV---EWTPPRAKVDFILLKYGLVG-GEGGKTTFRLQPPLSQYSVQ 73

Query: 404 GLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQS 451
            L P + Y+  + +  GT E       F+T    D   N  V  R+ +
Sbjct: 74  ALRPGSRYEVSISAVRGTNESDASSTQFTTEI--DAPKNLRVGSRTAT 119

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 Length = 283

 Score = 44.8 bits (106), Expect = 5e-05
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 4/81 (4%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTL-WHRRAHEGFPARPTCTLFAPNTRFVV 402
           P  ++     ATSL +     D S      Y + +   A E +          P T+  +
Sbjct: 108 PKNLRVGSRTATSLDL---EWDNSEAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTL 164

Query: 403 TGLCPATEYQFKVVSSNGTTE 423
           T L P TEY   + +   + +
Sbjct: 165 TDLVPGTEYGVGISAVMNSKQ 185

>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 49.0 bits (117), Expect = 2e-07
 Identities = 16/111 (14%), Positives = 31/111 (27%), Gaps = 8/111 (7%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  ++  ++      +      P    + +Y +       G P             + + 
Sbjct: 11  PTQLRALNLTEGFAVL---HWKPPQNPVDTYDIQVT--APGAPPL-QAETPGSAVDYPLH 64

Query: 404 GLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQSPAT 454
            L   T Y   V    G        I F+TG   +   +    E + S  +
Sbjct: 65  DLVLHTNYTATVRGLRGPNLTSPASITFTTGL--EAPRDLEAKEVTPSGPS 113

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A Length = 203

 Score = 51.0 bits (122), Expect = 3e-07
 Identities = 21/109 (19%), Positives = 35/109 (32%), Gaps = 7/109 (6%)

Query: 344 PNMVKFEDVRATSLTVVLGS-EDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 402
           P  + F D+  +S+ +        +   II Y +    A EG P      + +    + V
Sbjct: 26  PTDLSFVDITDSSIGL---RWTPLNSSTIIGYRITVVAAGEGIPIF-EDFVDSSVGYYTV 81

Query: 403 TGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQS 451
           TGL P  +Y   V +     E     +   T       T+         
Sbjct: 82  TGLEPGIDYDISVYTVKNGGESTPTTLTQQTAV--PPPTDLRFTNIGPD 128

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A Length = 203

 Score = 46.0 bits (109), Expect = 1e-05
 Identities = 14/81 (17%), Positives = 31/81 (38%), Gaps = 5/81 (6%)

Query: 344 PNMVKFEDVRATSLTVVLGS-EDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 402
           P  ++F ++   ++ V   +   P   ++ ++ + +             ++   +   V+
Sbjct: 117 PTDLRFTNIGPDTMRV---TWAPPPSIDLTNFLVRYSPVKNEEDVAEL-SISPSDNAVVL 172

Query: 403 TGLCPATEYQFKVVSSNGTTE 423
           T L P TEY   V S     E
Sbjct: 173 TNLLPGTEYVVSVSSVYEQHE 193

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 115

 Score = 48.5 bits (116), Expect = 3e-07
 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 7/77 (9%)

Query: 344 PNMVKFEDVRATSLTVVLGS-EDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 402
           P   K E    TS+ +   S   P    I +Y L ++    G   R T     P T + +
Sbjct: 21  PLNFKAEPESETSILL---SWTPPRSDTIANYELVYKDGEHGEEQRIT---IEPGTSYRL 74

Query: 403 TGLCPATEYQFKVVSSN 419
            GL P + Y F++ + +
Sbjct: 75  QGLKPNSLYYFRLAARS 91

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 Length = 186

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 5/77 (6%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  + F D+   S TV   S  P    + SY + +     G P     T+    TR  + 
Sbjct: 98  PKGISFSDITENSATV---SWTPPRSRVDSYRVSYVPITGGTPN--VVTVDGSKTRTKLV 152

Query: 404 GLCPATEYQFKVVSSNG 420
            L P  +Y   ++S  G
Sbjct: 153 KLVPGVDYNVNIISVKG 169

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 Length = 186

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 8/108 (7%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  ++  D   T+L++              Y L +         +    +   +T F++ 
Sbjct: 10  PKDLEVSDPTETTLSL---RWRRPVAKFDRYRLTYVSPSGK---KNEMEIPVDSTSFILR 63

Query: 404 GLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQS 451
           GL   TEY   +V+  G  +     I  ST          S  + +++
Sbjct: 64  GLDAGTEYTISLVAEKGRHKSKPTTIKGSTVVGS--PKGISFSDITEN 109

>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 47.8 bits (114), Expect = 5e-07
 Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 6/94 (6%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  ++ ++V   +  +   +    P     Y L                L    T   + 
Sbjct: 11  PRDLEAKEVTPRTALL---TWTEPPVRPAGYLLSFHTPGG---QTQEILLPGGITSHQLL 64

Query: 404 GLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSR 437
           GL P+T Y  ++ +  G + L      F+TG  R
Sbjct: 65  GLFPSTSYNARLQAMWGQSLLPPVSTSFTTGGLR 98

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score = 51.4 bits (123), Expect = 5e-07
 Identities = 21/77 (27%), Positives = 28/77 (36%), Gaps = 4/77 (5%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  + F D+ A S TV           I  Y + H   H     R    +        +T
Sbjct: 189 PTGIDFSDITANSFTV---HWIAPRATITGYRIRHHPEHFSGRPRED-RVPHSRNSITLT 244

Query: 404 GLCPATEYQFKVVSSNG 420
            L P TEY   +V+ NG
Sbjct: 245 NLTPGTEYVVSIVALNG 261

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score = 49.8 bits (119), Expect = 2e-06
 Identities = 16/78 (20%), Positives = 29/78 (37%), Gaps = 4/78 (5%)

Query: 343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 402
           VP  ++      TSL +   S D     +  Y + +       P +   T+    +   +
Sbjct: 278 VPRDLEVVAATPTSLLI---SWDAPAVTVRYYRITYGETGGNSPVQEF-TVPGSKSTATI 333

Query: 403 TGLCPATEYQFKVVSSNG 420
           +GL P  +Y   V +  G
Sbjct: 334 SGLKPGVDYTITVYAVTG 351

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score = 49.4 bits (118), Expect = 2e-06
 Identities = 13/80 (16%), Positives = 23/80 (28%), Gaps = 1/80 (1%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  +  E    T   + +  E  +  +I  Y +     +          + A  +     
Sbjct: 5   PTNLHLEANPDTG-VLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFD 63

Query: 404 GLCPATEYQFKVVSSNGTTE 423
            L P  EY   V +     E
Sbjct: 64  NLSPGLEYNVSVYTVKDDKE 83

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A Length = 368

 Score = 46.0 bits (109), Expect = 3e-05
 Identities = 14/81 (17%), Positives = 31/81 (38%), Gaps = 5/81 (6%)

Query: 344 PNMVKFEDVRATSLTVVLGS-EDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 402
           P  ++F ++   ++ V   +   P   ++ ++ + +             ++   +   V+
Sbjct: 98  PTDLRFTNIGPDTMRV---TWAPPPSIDLTNFLVRYSPVKNEEDVAEL-SISPSDNAVVL 153

Query: 403 TGLCPATEYQFKVVSSNGTTE 423
           T L P TEY   V S     E
Sbjct: 154 TNLLPGTEYVVSVSSVYEQHE 174

>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A Length = 95

 Score = 47.1 bits (112), Expect = 6e-07
 Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 4/82 (4%)

Query: 342 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFV 401
           +V       ++ A+S  V   S   +   +  + + +  + EG   +    L +  T   
Sbjct: 7   LVATSESVTEITASSFVV---SWVSASDTVSGFRVEYELSEEGDEPQYL-DLPSTATSVN 62

Query: 402 VTGLCPATEYQFKVVSSNGTTE 423
           +  L P  +Y   V   +   E
Sbjct: 63  IPDLLPGRKYIVNVYQISEDGE 84

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score = 51.0 bits (122), Expect = 8e-07
 Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 5/81 (6%)

Query: 344 PNMVKFEDVRATSLTVVLGS-EDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 402
              + F D+  +S+ +        +   II Y +    A EG P      + +    + V
Sbjct: 99  LTDLSFVDITDSSIGL---RWTPLNSSTIIGYRITVVAAGEGIPIFED-FVDSSVGYYTV 154

Query: 403 TGLCPATEYQFKVVSSNGTTE 423
           TGL P  +Y   V++     E
Sbjct: 155 TGLEPGIDYDISVITLINGGE 175

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score = 50.6 bits (121), Expect = 1e-06
 Identities = 22/80 (27%), Positives = 29/80 (36%), Gaps = 4/80 (5%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  + F D+ A S TV           I  Y + H   H     R    +        +T
Sbjct: 281 PTGIDFSDITANSFTV---HWIAPRATITGYRIRHHPEHFSGRPRED-RVPHSRNSITLT 336

Query: 404 GLCPATEYQFKVVSSNGTTE 423
            L P TEY   +V+ NG  E
Sbjct: 337 NLTPGTEYVVSIVALNGREE 356

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score = 49.0 bits (117), Expect = 3e-06
 Identities = 14/81 (17%), Positives = 31/81 (38%), Gaps = 5/81 (6%)

Query: 344 PNMVKFEDVRATSLTVVLGS-EDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 402
           P  ++F ++   ++ V   +   P   ++ ++ + +             ++   +   V+
Sbjct: 190 PTDLRFTNIGPDTMRV---TWAPPPSIDLTNFLVRYSPVKNEEDVAEL-SISPSDNAVVL 245

Query: 403 TGLCPATEYQFKVVSSNGTTE 423
           T L P TEY   V S     E
Sbjct: 246 TNLLPGTEYVVSVSSVYEQHE 266

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} Length = 375

 Score = 47.1 bits (112), Expect = 1e-05
 Identities = 16/108 (14%), Positives = 32/108 (29%), Gaps = 3/108 (2%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  +  E    T   + +  E  +  +I  Y +     +          + A  +     
Sbjct: 6   PTNLHLEANPDTG-VLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFD 64

Query: 404 GLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRDEVTNCSVIERSQS 451
            L P  EY   V +     E               ++T+ S ++ + S
Sbjct: 65  NLSPGLEYNVSVYTVKDDKESVPISDTIIPEV--PQLTDLSFVDITDS 110

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 130

 Score = 47.0 bits (112), Expect = 2e-06
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 8/80 (10%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSP----GNIISYTLWHRRAHEGFPARPTCTLFAPNTR 399
           P  + F +VR TS+ +      P P    G I++Y + HR             L     +
Sbjct: 31  PMGILFPEVRTTSVRL---IWQP-PAAPNGIILAYQITHRLNTTTANTATVEVLAPSARQ 86

Query: 400 FVVTGLCPATEYQFKVVSSN 419
           +  TGL P + Y F++ +  
Sbjct: 87  YTATGLKPESVYLFRITAQT 106

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A Length = 234

 Score = 48.2 bits (115), Expect = 3e-06
 Identities = 12/77 (15%), Positives = 25/77 (32%), Gaps = 5/77 (6%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P     +   +  +     +  P  G  + Y + +    +G        L +      +T
Sbjct: 9   PQNPNAKAAGSRKIHF---NWLPPSGKPMGYRVKYWI--QGDSESEAHLLDSKVPSVELT 63

Query: 404 GLCPATEYQFKVVSSNG 420
            L P  +Y+ KV +   
Sbjct: 64  NLYPYCDYEMKVCAYGA 80

>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A Length = 101

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 6/80 (7%)

Query: 343 VPNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRF 400
           VP  ++      TSL +   S D   S  ++  Y + +       P +   T+   ++  
Sbjct: 7   VPTKLEVVAATPTSLLI---SWDAPMSSSSVYYYRITYGETGGNSPVQ-EFTVPYSSSTA 62

Query: 401 VVTGLCPATEYQFKVVSSNG 420
            ++GL P  +Y   V +   
Sbjct: 63  TISGLSPGVDYTITVYAWGE 82

>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score = 45.0 bits (107), Expect = 4e-06
 Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 17/95 (17%)

Query: 327 SNTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-- 384
           S +  P P         P  +   +  ATS  V L  +  +   +  Y + +R A     
Sbjct: 3   SGSSGPKP---------PIDLVVTETTATS--VTLTWDSGNSEPVTYYGIQYRAAGTEGP 51

Query: 385 FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN 419
           F            TR+ + GL P +EY F+V++ N
Sbjct: 52  FQEVDGV----ATTRYSIGGLSPFSEYAFRVLAVN 82

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 45.5 bits (108), Expect = 4e-06
 Identities = 19/80 (23%), Positives = 32/80 (40%), Gaps = 9/80 (11%)

Query: 344 PNMVKFEDVRATSLTVVLGS----EDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTR 399
           P  V    V +  + +   S     +   GNI ++T++  R  +    R   T    + +
Sbjct: 21  PRDVVPVLVSSRFVRL---SWRPPAEAK-GNIQTFTVFFSREGDN-RERALNTTQPGSLQ 75

Query: 400 FVVTGLCPATEYQFKVVSSN 419
             V  L P   Y F+VV+ N
Sbjct: 76  LTVGNLKPEAMYTFRVVAYN 95

>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens} Length = 103

 Score = 44.7 bits (106), Expect = 5e-06
 Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 1/78 (1%)

Query: 343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 402
           VP  ++  D   TSL +   +   S  N+  Y + +       P +   T+    +   +
Sbjct: 10  VPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQ-EFTVPGYYSTATI 68

Query: 403 TGLCPATEYQFKVVSSNG 420
           +GL P  +Y   V + + 
Sbjct: 69  SGLKPGVDYTITVYAYDT 86

>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 109

 Score = 44.8 bits (106), Expect = 5e-06
 Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 1/72 (1%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
            + ++      +SL++         G ++ Y + +       P+     L     R  + 
Sbjct: 11  VSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSS-VRFLKTSENRAELR 69

Query: 404 GLCPATEYQFKV 415
           GL     Y  +V
Sbjct: 70  GLKRGASYLVQV 81

>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens} Length = 114

 Score = 44.8 bits (106), Expect = 6e-06
 Identities = 8/75 (10%), Positives = 24/75 (32%), Gaps = 5/75 (6%)

Query: 347 VKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTG 404
           +  +     S  + +       G   I+ Y + +R   +         +       ++  
Sbjct: 14  IHGQPSSGKSFKLSI--TKQDDGGAPILEYIVKYRSKDKEDQ-WLEKKVQGNKDHIILEH 70

Query: 405 LCPATEYQFKVVSSN 419
           L     Y+ ++ ++N
Sbjct: 71  LQWTMGYEVQITAAN 85

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 106

 Score = 44.2 bits (105), Expect = 7e-06
 Identities = 15/79 (18%), Positives = 23/79 (29%), Gaps = 10/79 (12%)

Query: 344 PNMVKFEDVRATSLTVVLGS-EDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPNTRF 400
               +     AT   V   + E P      +  Y L                   P   +
Sbjct: 11  CKPPQVTCRSATCAQV---NWEVPLSNGTDVTEYRLEWGGVEGSM----QICYCGPGLSY 63

Query: 401 VVTGLCPATEYQFKVVSSN 419
            + GL PAT Y  +V + +
Sbjct: 64  EIKGLSPATTYYCRVQALS 82

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 Length = 205

 Score = 46.6 bits (111), Expect = 8e-06
 Identities = 16/86 (18%), Positives = 26/86 (30%), Gaps = 6/86 (6%)

Query: 336 VQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTCTL 393
           VQ     VPN  K   +   +    +  E        I+ YT+    +            
Sbjct: 2   VQD----VPNAPKLTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEK 57

Query: 394 FAPNTRFVVTGLCPATEYQFKVVSSN 419
                   V  + P   Y F+V++ N
Sbjct: 58  VPNTDSSFVVQMSPWANYTFRVIAFN 83

>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1 Length = 105

 Score = 44.3 bits (105), Expect = 8e-06
 Identities = 19/88 (21%), Positives = 33/88 (37%), Gaps = 5/88 (5%)

Query: 338 GSNVIVPNMVKFEDVRATSLTVVLGSEDP-SPGN--IISYTLWHRRAHEGFPARPTCTLF 394
           GS++  P+    + V   S T  +  ++P + G   I+ Y    R   E           
Sbjct: 1   GSHMDTPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAK 60

Query: 395 APN--TRFVVTGLCPATEYQFKVVSSNG 420
             +      + GL P T Y  ++ + NG
Sbjct: 61  EASMEGIVTIVGLKPETTYAVRLAALNG 88

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens} Length = 122

 Score = 44.8 bits (106), Expect = 8e-06
 Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 5/74 (6%)

Query: 352 VRATSLTVVLGSEDP-SPGN--IISYTLWHRRAHEGFPARPTCTLFAP--NTRFVVTGLC 406
           V   S T  +  ++P + G   I+ Y    R   E                    + GL 
Sbjct: 16  VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLK 75

Query: 407 PATEYQFKVVSSNG 420
           P T Y  ++ + NG
Sbjct: 76  PETTYAVRLAALNG 89

>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 127

 Score = 44.3 bits (105), Expect = 1e-05
 Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 4/78 (5%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPNTRFV 401
           P  ++  D    S  V L        N  I  + + +  A          T  +      
Sbjct: 20  PFDLELTDQLDKS--VQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTA 77

Query: 402 VTGLCPATEYQFKVVSSN 419
              L P   Y F+V++ N
Sbjct: 78  QLNLSPYVNYSFRVMAVN 95

>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 44.0 bits (104), Expect = 1e-05
 Identities = 13/71 (18%), Positives = 18/71 (25%), Gaps = 7/71 (9%)

Query: 351 DVRATSLTVV--LGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPA 408
                S T+          P     Y L     + G             T   V GL   
Sbjct: 21  CTHNNSATLSWKQPPLSTVP--ADGYILELDDGNGGQFREVYVG---KETMCTVDGLHFN 75

Query: 409 TEYQFKVVSSN 419
           + Y  +V + N
Sbjct: 76  STYNARVKAFN 86

>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 118

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 6/79 (7%)

Query: 343 VPNMVKFEDVRATSLTVV--LGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRF 400
           +PN  +  +    SLT+     S++ S   I ++ L                      +F
Sbjct: 20  IPNPPRIANRTKNSLTLQWKAPSDNGSK--IQNFVLEWDEGKGNGEFCQCYM--GSQKQF 75

Query: 401 VVTGLCPATEYQFKVVSSN 419
            +T L PA   +F++ + N
Sbjct: 76  KITKLSPAMGCKFRLSARN 94

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A Length = 211

 Score = 45.6 bits (108), Expect = 2e-05
 Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 6/81 (7%)

Query: 344 PNMVKFEDVRATSLTV----VLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTR 399
           P  V+   +   ++ +        +     +   YT+  +               A    
Sbjct: 8   PVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNAN--ATTLS 65

Query: 400 FVVTGLCPATEYQFKVVSSNG 420
           ++VTGL P T Y+F V+ + G
Sbjct: 66  YLVTGLKPNTLYEFSVMVTKG 86

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A Length = 211

 Score = 44.4 bits (105), Expect = 4e-05
 Identities = 15/79 (18%), Positives = 25/79 (31%), Gaps = 3/79 (3%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSP--GNIISYTLWHRRAHEGFPARPTCTLFAPN-TRF 400
           P  V          T+++  + PS   G I  Y +++                  N    
Sbjct: 109 PKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTH 168

Query: 401 VVTGLCPATEYQFKVVSSN 419
            +  L   T Y FK+ + N
Sbjct: 169 QIQELTLDTPYYFKIQARN 187

>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 112

 Score = 43.4 bits (102), Expect = 2e-05
 Identities = 13/87 (14%), Positives = 24/87 (27%), Gaps = 10/87 (11%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTC-------TLFAP 396
            + +   DV  +SL +   + +  PG   S+ L                       +   
Sbjct: 12  LSQLSVTDVTTSSLRL---NWEAPPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGT 68

Query: 397 NTRFVVTGLCPATEYQFKVVSSNGTTE 423
               V+  L   T Y   +    G  +
Sbjct: 69  RHSAVLRDLRSGTLYSLTLYGLRGPHK 95

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 107

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 4/79 (5%)

Query: 343 VPN--MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRF 400
            P    +        +  +        PG ++ Y L + RA E  P   T      +  F
Sbjct: 7   GPGRPTMMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPN--TIDFGKDDQHF 64

Query: 401 VVTGLCPATEYQFKVVSSN 419
            VTGL   T Y F++ + N
Sbjct: 65  TVTGLHKGTTYIFRLAAKN 83

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} Length = 731

 Score = 46.7 bits (110), Expect = 2e-05
 Identities = 15/84 (17%), Positives = 25/84 (29%), Gaps = 6/84 (7%)

Query: 343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARP------TCTLFAP 396
           VP            + +       + G I  Y + ++      P           +    
Sbjct: 465 VPTESIQGSTFEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGN 524

Query: 397 NTRFVVTGLCPATEYQFKVVSSNG 420
            T F+  GL P T Y F + +S  
Sbjct: 525 ETHFLFFGLYPGTTYSFTIRASTA 548

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens} Length = 731

 Score = 44.8 bits (105), Expect = 9e-05
 Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 5/77 (6%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSP-GNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 402
               +   V AT L + L +   +  G I++  + +  A   +  R        +T + +
Sbjct: 265 IAPPQLASVGATYLWIQLNANSINGDGPIVAREVEYCTASGSWNDRQP----VDSTSYKI 320

Query: 403 TGLCPATEYQFKVVSSN 419
             L P TEY+  V+ + 
Sbjct: 321 GHLDPDTEYEISVLLTR 337

>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 116

 Score = 43.2 bits (102), Expect = 2e-05
 Identities = 8/76 (10%), Positives = 23/76 (30%), Gaps = 4/76 (5%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P+ +         + +           +  Y + +     G P   T  + +    + + 
Sbjct: 21  PSSLHVRPQ-TNCIIMSWTPPLNPNIVVRGYIIGYG---VGSPYAETVRVDSKQRYYSIE 76

Query: 404 GLCPATEYQFKVVSSN 419
            L  ++ Y   + + N
Sbjct: 77  RLESSSHYVISLKAFN 92

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score = 46.5 bits (109), Expect = 3e-05
 Identities = 20/116 (17%), Positives = 42/116 (36%), Gaps = 11/116 (9%)

Query: 309 PEVQKLCACAVESLDKMISNTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSP 368
             V+K C+       ++        P            ++F ++++  L V   S+    
Sbjct: 135 SGVKKCCSNGCGHTCQVPKTLYKGVPLKP------RKELRFTELQSGQLEVKWSSKFNIS 188

Query: 369 GNIISYTLWHRRAHEGFPARPTCTLF-----APNTRFVVTGLCPATEYQFKVVSSN 419
              + Y +  R  +   P+    T +       + R  +T + P+  YQF+V + N
Sbjct: 189 IEPVIYVVQRRWNYGIHPSEDDATHWQTVAQTTDERVQLTDIRPSRWYQFRVAAVN 244

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens} Length = 680

 Score = 44.2 bits (103), Expect = 1e-04
 Identities = 16/143 (11%), Positives = 39/143 (27%), Gaps = 5/143 (3%)

Query: 328 NTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRR---AHEG 384
             I      Q      P  V     +   L V +  +      +  Y +       AH  
Sbjct: 389 GGIQTQLPFQRRRPTRPLEVGAPFYQDGQLQVKVYWKKTEDPTVNRYHVRWFPEACAHNR 448

Query: 385 FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSRD--EVTN 442
                  +        ++  L  + +Y+  V      +      ++F+T         ++
Sbjct: 449 TTGSEASSGMTHENYIILQDLSFSCKYKVTVQPIRPKSHSKAEAVFFTTPPCSALKGKSH 508

Query: 443 CSVIERSQSPATNCSSLSNPSSV 465
             +    ++       L+ P ++
Sbjct: 509 KPIGCLGEAGHVLSKVLAKPENL 531

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A Length = 214

 Score = 44.8 bits (106), Expect = 3e-05
 Identities = 13/89 (14%), Positives = 26/89 (29%), Gaps = 15/89 (16%)

Query: 344 PNMVKFEDVRATSLTVV--LGSEDPSPGNIISYTL----------WHRRAHEGFPARPTC 391
           P       +   S+ +   +   D  P  I+ + +          W          +P  
Sbjct: 5   PTPPNVTRLSDESVMLRWMVPRNDGLP--IVIFKVQYRMVGKRKNWQTTNDNIPYGKPKW 62

Query: 392 TLFAPN-TRFVVTGLCPATEYQFKVVSSN 419
                      VT L P   Y+F++++  
Sbjct: 63  NSELGKSFTASVTDLKPQHTYRFRILAVY 91

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 111

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 8/79 (10%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDP---SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRF 400
             +++ E    TS+++            G I+ Y + +    +   +    TL A  TR 
Sbjct: 14  VVVIRQERAGQTSVSL---LWQEPEQPNGIILEYEIKYYEKDKEMQS--YSTLKAVTTRA 68

Query: 401 VVTGLCPATEYQFKVVSSN 419
            V+GL P T Y F+V +  
Sbjct: 69  TVSGLKPGTRYVFQVRART 87

>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 110

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 6/79 (7%)

Query: 344 PNMVKFEDVRATSLTVV-LGSEDPSPGNIISYTLWHRR--AHEGFPARPTCTLFAPNTRF 400
           P ++  + V  T++T+     +      +  Y L +      +   A          T+F
Sbjct: 11  PTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVANKDLI---DKTKF 67

Query: 401 VVTGLCPATEYQFKVVSSN 419
            +TGL    +   +V + N
Sbjct: 68  TITGLPTDAKIFVRVKAVN 86

>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 109

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 17/77 (22%), Positives = 28/77 (36%), Gaps = 3/77 (3%)

Query: 344 PNMVKFEDVRATSLTVV-LGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 402
           P          T L++             ISY L       G+  +P       +  + V
Sbjct: 11  PASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFKPKYDG--EDLAYTV 68

Query: 403 TGLCPATEYQFKVVSSN 419
             L  +T+Y+FKV++ N
Sbjct: 69  KNLRRSTKYKFKVIAYN 85

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 119

 Score = 42.4 bits (100), Expect = 4e-05
 Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
              + F ++  TSL V         G +  Y +     +     R T  L      + VT
Sbjct: 21  VGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNT-RVTHYLPNVTLEYRVT 79

Query: 404 GLCPATEYQFKVVSSN 419
           GL   T Y  +V +  
Sbjct: 80  GLTALTTYTIEVAAMT 95

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A Length = 209

 Score = 44.0 bits (104), Expect = 5e-05
 Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 2/76 (2%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P +         S+ V L  +D     I  Y + +R     +  +P   L + +   ++ 
Sbjct: 113 PKLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEW--KPEIRLPSGSDHVMLK 170

Query: 404 GLCPATEYQFKVVSSN 419
            L    EY+  VV+ N
Sbjct: 171 SLDWNAEYEVYVVAEN 186

>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 104

 Score = 41.7 bits (98), Expect = 6e-05
 Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 5/93 (5%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  +    V   ++ +   +  PS G    Y +    A           +       ++ 
Sbjct: 12  PRALTLAAVTPRTVHL---TWQPSAG-ATHYLVRCSPASPKGEEEER-EVQVGRPEVLLD 66

Query: 404 GLCPATEYQFKVVSSNGTTELGRCEIWFSTGSS 436
           GL P  +Y+  V S  G        I   T +S
Sbjct: 67  GLEPGRDYEVSVQSLRGPEGSEARGIRARTPTS 99

>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 108

 Score = 41.7 bits (98), Expect = 7e-05
 Identities = 12/77 (15%), Positives = 24/77 (31%), Gaps = 3/77 (3%)

Query: 343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 402
           VP  +        S+T+     +   G I+ Y + +           +    +      +
Sbjct: 11  VPI-MHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFN--SSMARSQTNTARI 67

Query: 403 TGLCPATEYQFKVVSSN 419
            GL P   Y  +V +  
Sbjct: 68  DGLRPGMVYVVQVRART 84

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} Length = 197

 Score = 43.1 bits (102), Expect = 8e-05
 Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 3/77 (3%)

Query: 344 PNMVKFEDVRATSLTVV-LGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 402
           P  +K ++V  TS+T+            I +Y +  R +     +          T + V
Sbjct: 9   PQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATN--CHKTSWKV 66

Query: 403 TGLCPATEYQFKVVSSN 419
             L     Y F+V++ N
Sbjct: 67  DQLQEGCSYYFRVLAEN 83

>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1 Length = 120

 Score = 41.9 bits (98), Expect = 9e-05
 Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 2/78 (2%)

Query: 344 PNMVKFEDVRATSLTVV-LGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAP-NTRFV 401
           P+      V   S+ +     +           L      E         ++    TR V
Sbjct: 19  PHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGYATRHV 78

Query: 402 VTGLCPATEYQFKVVSSN 419
           V GL P T Y+F++  ++
Sbjct: 79  VEGLEPRTLYKFRLKVTS 96

>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 121

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 13/78 (16%), Positives = 26/78 (33%)

Query: 343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 402
            P  V+   + +T++ V     +   G I  Y +++                A +    +
Sbjct: 21  APRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTI 80

Query: 403 TGLCPATEYQFKVVSSNG 420
             L P   Y  KV++   
Sbjct: 81  GNLVPQKTYSVKVLAFTS 98

>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1 Length = 115

 Score = 41.1 bits (96), Expect = 1e-04
 Identities = 13/89 (14%), Positives = 30/89 (33%), Gaps = 15/89 (16%)

Query: 344 PNMVKFEDVRATSLTV--VLGSEDPSPGNIISYTLWHRR---------AHEGFPARPTCT 392
           P       +   S+ +  ++   D  P  I+ + + +R           ++  P      
Sbjct: 6   PTPPNVTRLSDESVMLRWMVPRNDGLP--IVIFKVQYRMVGKRKNWQTTNDNIPYGKPKW 63

Query: 393 LFAP--NTRFVVTGLCPATEYQFKVVSSN 419
                 +    VT L P   Y+F++++  
Sbjct: 64  NSELGKSFTASVTDLKPQHTYRFRILAVY 92

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens} Length = 589

 Score = 44.2 bits (104), Expect = 1e-04
 Identities = 35/231 (15%), Positives = 66/231 (28%), Gaps = 32/231 (13%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPN-TRF 400
           P+ +   +    S  + L   +PS  +  I+ Y + +R       ++      A   + F
Sbjct: 202 PHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSF 261

Query: 401 VVTGLCPATEYQFKVVSSNGTTELGRC-------EIWFSTGSSRDEVTNCSVIERSQSPA 453
            V  L P TEY F++       E G+        E    T   R         +   S  
Sbjct: 262 TVQDLKPFTEYVFRIRCMK---EDGKGYWSDWSEEASGITYEDRPSKAPSFWYKIDPSHT 318

Query: 454 TNCSSLSNPSSVEDETNNVTPDRDPNDAQVNNYYTYSKETDKIASTNLCDDAIDCTVLGR 513
               ++     +  +T    P  + N  ++ +Y             N   +A   TV   
Sbjct: 319 QGYRTV----QLVWKT---LPPFEAN-GKILDYEVTLTRWKS-HLQNYTVNATKLTVNLT 369

Query: 514 GTTPADAVSLLDEERANNIDGSMPDSHV----QKLESKHPPEGRIIEEMST 560
                  +         N+ G    + +       ++ HP           
Sbjct: 370 NDRYLATL------TVRNLVGKSDAAVLTIPACDFQATHPVMDLKAFPKDN 414

>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1 Length = 121

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 5/79 (6%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHE-GFPARPTCTLFAPNTRF 400
           P+         TS+ V         G   I S+ + +++  + G     T  +       
Sbjct: 21  PDRPTISTASETSVYVTW--IPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSV 78

Query: 401 VVTGLCPATEYQFKVVSSN 419
            +TGL     Y+F+V + N
Sbjct: 79  EITGLEKGISYKFRVRALN 97

>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1 Length = 111

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 17/77 (22%), Positives = 23/77 (29%), Gaps = 2/77 (2%)

Query: 344 PNMVKFEDVRATSLTVV-LGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 402
           P  +  EDV  T+ T+     +    G I  Y +            P          F V
Sbjct: 12  PQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLV-EYCLEGSEEWVPANKEPVERCGFTV 70

Query: 403 TGLCPATEYQFKVVSSN 419
             L       F+VV  N
Sbjct: 71  KDLPTGARILFRVVGVN 87

>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1 Length = 107

 Score = 40.5 bits (95), Expect = 2e-04
 Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 7/74 (9%)

Query: 347 VKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGL 405
           +K        L +      P +PG  +SY L      E +             R ++T L
Sbjct: 16  LKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEEWHQMVL------EPRVLLTKL 69

Query: 406 CPATEYQFKVVSSN 419
            P T Y  +V +  
Sbjct: 70  QPDTTYIVRVRTLT 83

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A* Length = 536

 Score = 44.0 bits (103), Expect = 2e-04
 Identities = 15/76 (19%), Positives = 25/76 (32%), Gaps = 3/76 (3%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  V+ E    TSL+V      P    +  Y + +R+  +                  + 
Sbjct: 444 PPKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDSNSYN---VRRTEGFSVTLD 500

Query: 404 GLCPATEYQFKVVSSN 419
            L P T Y  +V +  
Sbjct: 501 DLAPDTTYLVQVQALT 516

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 119

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 4/78 (5%)

Query: 344 PNMVKFEDVRATSLTVVLGS-EDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 402
           P  V  + + ++ ++V     E      + SY + +  AH+   A     + +      +
Sbjct: 22  PTEVGVKVLSSSEISV---HWEHVLEKIVESYQIRYWAAHDKEEAANRVQVTSQEYSARL 78

Query: 403 TGLCPATEYQFKVVSSNG 420
             L P T+Y  +V + N 
Sbjct: 79  ENLLPDTQYFIEVGACNS 96

>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 113

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 15/82 (18%), Positives = 29/82 (35%), Gaps = 6/82 (7%)

Query: 343 VPNMVKFEDVRATSLTV----VLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNT 398
            P  V+   +   ++ +        +     +   YT+  +               A   
Sbjct: 11  PPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANT--KYKNANATTL 68

Query: 399 RFVVTGLCPATEYQFKVVSSNG 420
            ++VTGL P T Y+F V+ + G
Sbjct: 69  SYLVTGLKPNTLYEFSVMVTKG 90

>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 121

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 18/76 (23%), Positives = 29/76 (38%), Gaps = 5/76 (6%)

Query: 346 MVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           +     V   +  + L    P  GN  +I Y L     +  +      ++    T   V 
Sbjct: 25  VATLSTVERRA--INLTWTKPFDGNSPLIRYILEMSENNAPWTVLLA-SVDPKATSVTVK 81

Query: 404 GLCPATEYQFKVVSSN 419
           GL PA  YQF++ + N
Sbjct: 82  GLVPARSYQFRLCAVN 97

>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 124

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 14/82 (17%), Positives = 23/82 (28%), Gaps = 8/82 (9%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPAR----PTCTLFAPN 397
           P  +   ++   S  V L       G   I  + +  +    G           +     
Sbjct: 21  PTNLGISNIGPRS--VTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDA 78

Query: 398 TRFVVTGLCPATEYQFKVVSSN 419
               V  L P T Y F++   N
Sbjct: 79  RSMEVPDLNPFTCYSFRMRQVN 100

>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 123

 Score = 39.9 bits (93), Expect = 4e-04
 Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 6/82 (7%)

Query: 343 VPNMVKFEDVRATSLTV----VLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNT 398
            P  V+   +   ++ V        ++     +  YT+  R +        +      + 
Sbjct: 21  PPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAKYKSED--TTSL 78

Query: 399 RFVVTGLCPATEYQFKVVSSNG 420
            +  TGL P T Y+F V+ +  
Sbjct: 79  SYTATGLKPNTMYEFSVMVTKN 100

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 116

 Score = 39.6 bits (93), Expect = 4e-04
 Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 10/79 (12%)

Query: 344 PNMVKFEDVRATSLTVVLGS-EDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPNTRF 400
              ++      TS+TV   + E P  GN  I +Y L++              +   +  +
Sbjct: 21  APNLRAYAASPTSITV---TWETPVSGNGEIQNYKLYYMEKGTD----KEQDVDVSSHSY 73

Query: 401 VVTGLCPATEYQFKVVSSN 419
            + GL   TEY F+VV+ N
Sbjct: 74  TINGLKKYTEYSFRVVAYN 92

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 106

 Score = 39.2 bits (92), Expect = 4e-04
 Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 10/79 (12%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSP---GNIISYTLWHRRAHEGFPARPTCTLFAPNTRF 400
              ++      TS+ +   + +P     G +  Y L+      G               +
Sbjct: 11  VENLQAVSTSPTSILI---TWEPPAYANGPVQGYRLFCTEVSTGKEQNIE----VDGLSY 63

Query: 401 VVTGLCPATEYQFKVVSSN 419
            + GL   TEY  + ++ N
Sbjct: 64  KLEGLKKFTEYSLRFLAYN 82

>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1 Length = 126

 Score = 39.7 bits (93), Expect = 5e-04
 Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 5/79 (6%)

Query: 343 VPNMVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPNTRF 400
           VP +     VR    ++V+    P   N  +  Y + +     G P   T  +      +
Sbjct: 27  VPEVPSSLHVRPLVTSIVVSWTPPENQNIVVRGYAIGYG---IGSPHAQTIKVDYKQRYY 83

Query: 401 VVTGLCPATEYQFKVVSSN 419
            +  L P++ Y   + + N
Sbjct: 84  TIENLDPSSHYVITLKAFN 102

>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 103

 Score = 38.8 bits (91), Expect = 7e-04
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 12/82 (14%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSP-----GNIISYTLWHRRAHEGFPARPTCTLFAPNT 398
           P  +    +  ++  +   + DP       G IISYT+  R  +     +        +T
Sbjct: 12  PQNLHVTGLTTSTTEL---AWDPPVLAERNGRIISYTVVFRDINS----QQELQNITTDT 64

Query: 399 RFVVTGLCPATEYQFKVVSSNG 420
           RF +TGL P T Y  KV +   
Sbjct: 65  RFTLTGLKPDTTYDIKVRAWTS 86

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens} Length = 215

 Score = 40.6 bits (95), Expect = 9e-04
 Identities = 16/82 (19%), Positives = 27/82 (32%), Gaps = 5/82 (6%)

Query: 343 VPNMVKFEDVRATSLTVVLGSEDPSP-GN--IISYTLWHRRAHEG--FPARPTCTLFAPN 397
            P+    + V   S T  +  ++P   G   I+ Y    R   E             +  
Sbjct: 113 TPSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASME 172

Query: 398 TRFVVTGLCPATEYQFKVVSSN 419
               + GL P T Y  ++ + N
Sbjct: 173 GIVTIVGLKPETTYAVRLAALN 194

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	734
3b83_A	100	Ten-D3; beta sheet, computational redesigned prote	98.72
1x4y_A	114	Biregional cell adhesion molecule-related/DOWN- re	98.71
3tes_A	98	Tencon; fibronectin type III domain, FN3, consensu	98.7
3n1f_C	102	Cell adhesion molecule-related/DOWN-regulated BY;	98.64
2dn7_A	107	Receptor-type tyrosine-protein phosphatase F; LAR	98.64
2ee3_A	108	Collagen alpha-1(XX) chain; KIAA1510, structural g	98.63
2djs_A	108	Ephrin type-B receptor 1; tyrosine-protein kinase	98.63
1x5g_A	116	Neogenin; RGM binding, fibronectin type III domain	98.58
1uen_A	125	KIAA0343 protein; immunoglobulin-like beta-sandwic	98.56
1wfo_A	130	Sidekick 2; FN3, cell adhesion, structural genomic	98.55
3t04_D	103	Monobody 7C12; engineered binding protein, antibod	98.54
2rb8_A	104	Tenascin; beta sheet,loop design, alternative spli	98.53
1j8k_A	94	Fibronectin; EDA, TYPEIII domain, protein binding;	98.52
2edx_A	134	Protein tyrosine phosphatase, receptor type, F; LA	98.49
1x5l_A	111	Ephrin type-A receptor 8; FN3 domain, structural g	98.49
1x5z_A	115	Receptor-type tyrosine-protein phosphatase delta;	98.48
2ee2_A	119	Contactin-1; neural cell surface protein F3, glyco	98.46
2ed8_A	106	Netrin receptor DCC; tumor suppressor protein DCC,	98.45
2dlh_A	121	Receptor-type tyrosine-protein phosphatase delta;	98.45
2cum_A	105	Tenascin-X; hexabrachion-like, fibronectin type II	98.44
3teu_A	98	Fibcon; FN3 domain, fibronectin TPYE III domain, c	98.44
1ujt_A	120	KIAA1568 protein; fibronectin type III domain, str	98.42
2ede_A	114	Netrin receptor DCC; tumor suppressor protein DCC,	98.42
2yrz_A	118	Integrin beta-4; GP150, CD104 antigen, structural	98.41
2e7h_A	109	Ephrin type-B receptor 4; FN3 domain, tyrosine- pr	98.41
1va9_A	122	DOWN syndrome cell adhesion molecule like- protein	98.41
3k2m_C	101	Monobody HA4; engineered binding protein, antibody	98.4
2ed9_A	124	Netrin receptor DCC; tumor suppressor protein DCC,	98.4
2dkm_A	104	Collagen alpha-1(XX) chain; FN3 domain, KIAA1510,	98.39
2cuh_A	115	Tenascin-X; fibronectin type III domain, extracell	98.39
1x5f_A	120	Neogenin; RGM binding, fibronectin type III domain	98.38
1x5j_A	113	Neogenin; RGM binding, fibronectin type III domain	98.36
2edy_A	103	Receptor-type tyrosine-protein phosphatase F; LAR	98.36
3qht_C	97	Monobody YSMB-1; fibronectin type III, yeast small	98.35
2edb_A	116	Netrin receptor DCC; tumor suppressor protein DCC,	98.35
2edd_A	123	Netrin receptor DCC; tumor suppressor protein DCC,	98.35
2ekj_A	105	Collagen alpha-1(XX) chain; KIAA1510, structural g	98.34
2dju_A	106	Receptor-type tyrosine-protein phosphatase F; LAR	98.32
1wfn_A	119	Sidekick 2; FN3, cell adhesion, structural genomic	98.32
2ed7_A	119	Netrin receptor DCC; tumor suppressor protein DCC,	98.3
2dbj_A	124	Proto-oncogene tyrosine-protein kinase MER precurs	98.29
3qwq_B	114	Adnectin; cell surface receptor, tyrosine kinase,	98.26
2ocf_D	121	Fibronectin; estrogen receptor, LBD, monobody, est	98.26
1x5i_A	126	Neogenin; RGM binding, fibronectin type III domain	98.26
1x4x_A	106	Fibronectin type-III domain containing protein 3A;	98.24
1x5x_A	109	Fibronectin type-III domain containing protein 3A;	98.23
1bpv_A	112	Titin, A71, connectin; fibronectin type III; NMR {	98.23
1x4z_A	121	Biregional cell adhesion molecule-related/DOWN- re	98.21
2haz_A	105	N-CAM 1, neural cell adhesion molecule 1; fibronec	98.19
2cui_A	112	Tenascin-X; fibronectin type III domain, extracell	98.17
1x3d_A	118	Fibronectin type-III domain containing protein 3A;	98.17
2dm4_A	108	Sortilin-related receptor; beta-sandwich, sorting	98.16
1x5y_A	111	Myosin binding protein C, fast-type; fast MYBP-C,	98.16
2ic2_A	115	CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin t	98.16
1uem_A	117	KIAA1568 protein; immunoglobulin-like beta-sandwic	98.15
1x5h_A	132	Neogenin; RGM binding, fibronectin type III domain	98.14
1wis_A	124	KIAA1514 protein; FNIII domain, sidekick-2, struct	98.13
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	98.12
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	98.11
2qbw_A	195	PDZ-fibronectin fusion protein; fibronectin PDZ, u	98.09
1x5a_A	107	Ephrin type-A receptor 1; tyrosine-protein kinase	98.09
1uey_A	127	KIAA0343 protein; immunoglobulin-like beta-sandwic	98.08
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	98.08
2gee_A	203	Hypothetical protein; fibronectin, EIIIB, cancer,	98.04
2yuw_A	110	Myosin binding protein C, SLOW type; fibronectin I	98.03
2kbg_A	114	N-CAM 2, neural cell adhesion molecule 2; fibronec	98.02
2e3v_A	122	Neural cell adhesion molecule 1, 140 kDa isoform;	98.02
2yux_A	120	Myosin-binding protein C, SLOW-type; fibronectin I	98.01
1wf5_A	121	Sidekick 2 protein; FNIII domain, structural genom	98.01
1wj3_A	117	KIAA1496 protein; beta sandwich, PANG, structural	98.01
2h41_A	95	Fibronectin; beta sandwich, cell adhesion, structu	98.0
2dmk_A	127	Midline 2 isoform 2; midline defect 2, tripartite	98.0
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	97.99
2crz_A	110	Fibronectin type-III domain containing protein 3A;	97.98
2crm_A	120	Fibronectin type-III domain containing protein 3A;	97.98
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	97.97
2db8_A	110	Tripartite motif protein 9, isoform 2; ring finger	97.97
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	97.92
1qr4_A	186	Protein (tenascin); fibronectin type-III, heparin,	97.92
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	97.89
3p4l_A	211	Neogenin; iron homeostasis, hemojuvelin receptor,	97.88
1v5j_A	108	KIAA1355 protein, RSGI RUH-008; FN3 domain, human	97.88
1i1r_A	303	GP130, interleukin-6 receptor beta chain; cytokine	97.85
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	97.84
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	97.83
1k85_A	88	Chitinase A1; fibronectin type III domain, chitin	97.82
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	97.82
3f7q_A	234	Integrin beta-4, GP150; hemidesmosome, cell adhesi	97.81
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	97.81
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	97.8
2ha1_A	201	Fibronectin; beta sandwich, protein-protein comple	97.8
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	97.78
2w1n_A	238	O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrol	97.78
2ibg_A	214	CG9211-PA, GH03927P; IHOG, fibronectin type III, p	97.78
1cfb_A	205	Drosophila neuroglian; neural adhesion molecule; H	97.76
1bqu_A	215	Protein (GP130); cytokine receptor, glycoprotein 1	97.75
1tdq_A	283	Tenascin-R; extracellular matrix, lecticans, tenas	97.74
1wk0_A	137	KIAA0970 protein; fibronectin type III domain, str	97.74
3r8q_A	290	Fibronectin; heparin, FNIII, heparin binding, cell	97.68
3csg_A	461	MBP, maltose-binding protein monobody YS1 fusion,	97.67
2dle_A	104	Receptor-type tyrosine-protein phosphatase ETA; pr	97.65
3lpw_A	197	A77-A78 domain from titin; intracellular FNIII-tan	97.64
1wfu_A	120	Unnamed protein product; FN3 domain, similar to 17	97.59
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	97.57
4go6_B	232	HCF C-terminal chain 1; tandem fibronectin repeat,	97.52
3n06_B	210	PRL-R, prolactin receptor; PH dependence, hematopo	97.51
3t1w_A	375	Four-domain fibronectin fragment; human fibronecti	97.5
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	97.42
2vkw_A	209	Neural cell adhesion molecule 1,140 kDa isoform; a	97.34
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	97.33
1cd9_B	215	G-CSF-R, protein (G-CSF receptor); class1 cytokine	97.32
1n26_A	325	IL-6 receptor alpha chain; transmembrane, glycopro	97.31
1uc6_A	109	CNTF receptor, ciliary neurotrophic factor recepto	97.3
1fnf_A	368	Fibronectin; RGD, extracellular matrix, cell adhes	97.27
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	97.13
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	97.03
3l5i_A	290	Interleukin-6 receptor subunit beta; cytokine rece	97.01
1zlg_A	680	Anosmin 1; insulin-like growth factor receptor Cys	97.01
2d9q_B	313	Granulocyte colony-stimulating factor receptor; cy	96.99
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	96.97
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	96.95
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	96.92
1bqu_A	215	Protein (GP130); cytokine receptor, glycoprotein 1	96.8
3lqm_A	201	Interleukin-10 receptor subunit beta; IL-10R2, com	96.62
3l5h_A	589	Interleukin-6 receptor subunit beta; IG-like, FNII	96.61
2v5y_A	731	Receptor-type tyrosine-protein phosphatase MU; mem	96.59
3s98_A	306	Interferon alpha/beta receptor 1; human, type I in	96.46
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	96.36
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	96.34
1i1r_A	303	GP130, interleukin-6 receptor beta chain; cytokine	96.14
2b5i_B	214	Interleukin-2 receptor beta chain; four-helix bund	96.13
3bpo_C	314	Interleukin-13 receptor alpha-1 chain; IL4, IL13,	96.11
1eer_B	227	Epobp, erythropoietin receptor; signal transductio	96.09
4doh_B	206	Interleukin-20 receptor subunit beta; IL10 family	96.08
2jll_A	389	NCAM2, neural cell adhesion molecule 2; immunoglob	95.87
3se4_A	414	Interferon alpha/beta receptor 1; type I interfero	95.86
3mtr_A	215	N-CAM-1, NCAM-1, neural cell adhesion molecule 1;	95.52
2q7n_A	488	Leukemia inhibitory factor receptor; cytokine cell	95.45
3mpc_A	103	FN3-like protein; fibronectin, FN(III), unknown fu	95.09
2gys_A	419	Cytokine receptor common beta chain; dimer of inte	95.01
2nzi_A	305	Titin; IG-domain, FNIII-domain, transferase; 2.90A	94.98
3se4_A	414	Interferon alpha/beta receptor 1; type I interfero	94.93
4go6_B	232	HCF C-terminal chain 1; tandem fibronectin repeat,	94.79
4doh_R	221	Interleukin-20 receptor subunit alpha; IL10 family	94.59
1cd9_B	215	G-CSF-R, protein (G-CSF receptor); class1 cytokine	94.52
1axi_B	236	HGHBP, growth hormone receptor; complex (hormone-r	94.35
3v6o_A	206	Leptin receptor; receptor-antibody complex, cytoki	93.67
3s98_A	306	Interferon alpha/beta receptor 1; human, type I in	93.43
3lqh_A	183	Histone-lysine N-methyltransferase MLL; PHD finger	93.27
3lqm_A	201	Interleukin-10 receptor subunit beta; IL-10R2, com	93.2
2d9q_B	313	Granulocyte colony-stimulating factor receptor; cy	92.81
3n06_B	210	PRL-R, prolactin receptor; PH dependence, hematopo	92.74
3g9v_A	211	Interleukin 22 receptor, alpha 2; cytokine, cytoki	92.63
3e0g_A	483	Leukemia inhibitory factor receptor; IG domain, cy	92.59
2k16_A	75	Transcription initiation factor TFIID subunit 3; p	91.4
3g9v_A	211	Interleukin 22 receptor, alpha 2; cytokine, cytoki	89.92
2b5i_C	199	Cytokine receptor common gamma chain; four-helix b	89.2
2gys_A	419	Cytokine receptor common beta chain; dimer of inte	88.9
3lb6_C	380	IL-13, interleukin-13 receptor subunit alpha-2; cy	86.9
1we9_A	64	PHD finger family protein; structural genomics, PH	86.68
2erj_C	247	Cytokine receptor common gamma chain; immune syste	86.38
2kgg_A	52	Histone demethylase jarid1A; PHD finger, histone m	85.73
3bpo_C	314	Interleukin-13 receptor alpha-1 chain; IL4, IL13,	84.69
1wee_A	72	PHD finger family protein; structural genomics, PH	83.8
3dlq_R	211	Interleukin-22 receptor subunit alpha-1; cytokine-	82.92
1wew_A	78	DNA-binding family protein; structural genomics, P	81.66
3o70_A	68	PHD finger protein 13; PHF13, structural genomics	81.64

>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}

Probab=98.72  E-value=5.1e-08  Score=83.36  Aligned_cols=91  Identities=23%  Similarity=0.244  Sum_probs=72.0

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      ++..+++.+++++||+|-+....   ..|.||.|+|+..... ...  ...+....+.+.|.||.|.|+|.|+|.+++..
T Consensus         4 ~P~~l~~~~~~~~sv~lsW~pP~---~~i~~Y~v~y~~~~~~~~~~--~~~~~~~~t~~~i~~L~p~t~Y~~~V~A~n~~   78 (100)
T 3b83_A            4 PPFNIKVTNITLTTAVVTWQPPI---LPIEGILVTFGRKNDPSDET--TVDLTSSITSLTLTNLEPNTTYEIRIVARNGQ   78 (100)
T ss_dssp             CCEEEEEESCCSSCEEEEEECCS---SCCSEEEEEEEESSCTTTCE--EEEECTTEEEEEECSCCTTCEEEEEEEEEETT
T ss_pred             cCCccEEEEecCCEEEEEEcCCc---ccCCEEEEEEEECCCCCCce--EEEECCcceEEEECCCCCCCEEEEEEEEEeCC
Confidence            44568999999999999986553   3699999999977543 211  23466788999999999999999999999999


Q ss_pred             ccCcceeeEEecCcccc
Q 004714          422 TELGRCEIWFSTGSSRD  438 (734)
Q Consensus       422 ~elg~~E~k~~T~s~e~  438 (734)
                      |.=-.......|...+.
T Consensus        79 g~s~p~~~~~~~~~~~~   95 (100)
T 3b83_A           79 QYSPPVSTTFTTGSLEH   95 (100)
T ss_dssp             EECCCEEEEEECCCCCC
T ss_pred             CCCCCEEEEEEEEeeec
Confidence            87667777777765543

>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1

Probab=98.71  E-value=7.4e-08  Score=83.24  Aligned_cols=92  Identities=14%  Similarity=0.084  Sum_probs=69.4

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  419 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  419 (734)
                      ++..+++++++++||+|-+.....  ....|.||+|+||..... .......++..+.++++|+||.|.|+|.|||.+|+
T Consensus        11 ~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n   90 (114)
T 1x4y_A           11 GPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYDIKMQCFN   90 (114)
T ss_dssp             CCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTCCEEEECSCCTTCEEEEEEEEEC
T ss_pred             CCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeEecCCcEeEEEcCCCCCCCEEEEEEEEEc
Confidence            455689999999999999988753  457899999999976543 11111235566778999999999999999999999


Q ss_pred             CCccCcce-eeEEecC
Q 004714          420 GTTELGRC-EIWFSTG  434 (734)
Q Consensus       420 ~~~elg~~-E~k~~T~  434 (734)
                      ..|+=-.+ .+.+.|.
T Consensus        91 ~~G~g~~S~~v~~~T~  106 (114)
T 1x4y_A           91 EGGESEFSNVMICETK  106 (114)
T ss_dssp             TTCCCCCCCCEEEECC
T ss_pred             CCccCCCcCCEEEEeC
Confidence            98863333 3455554

>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}

Probab=98.70  E-value=6.6e-08  Score=82.94  Aligned_cols=89  Identities=20%  Similarity=0.303  Sum_probs=71.5

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCC-ceeeecCCceeEeecCCcceeeeEEEEecc
Q 004714          341 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARP-TCTLFAPNTRFVVTGLCPATEYQFKVVSSN  419 (734)
Q Consensus       341 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ep-t~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  419 (734)
                      ||++..+++.+++++||+|-+....   +.|.||.|.|+.....  .++ ...+....+++.|+||.|.|+|.|+|.+++
T Consensus         2 lp~P~~l~v~~~t~~Sv~lsW~~p~---~~i~~Y~v~y~~~~~~--~~~~~~~~~~~~t~~~l~gL~P~t~Y~~~V~A~~   76 (98)
T 3tes_A            2 LPAPKNLVVSEVTEDSLRLSWTAPD---AAFDSFMIQYQESEKV--GEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVK   76 (98)
T ss_dssp             BCCCEEEEEESCCSSCEEEEEECCT---TSCSEEEEEEEETTBC--SCCEEEEEETTCSEEEECSCCTTCEEEEEEEEEE
T ss_pred             CCCCCceEEEecCCCeEEEEecCCc---CccceEEEEEEECCCC--CceEEEEcCCCcCEEEECCCCCCCEEEEEEEEEe
Confidence            5677789999999999999998654   4799999999987532  112 234566789999999999999999999999


Q ss_pred             CCccCcceeeEEecC
Q 004714          420 GTTELGRCEIWFSTG  434 (734)
Q Consensus       420 ~~~elg~~E~k~~T~  434 (734)
                      +.|+-........|.
T Consensus        77 ~~g~S~p~~~~~~~~   91 (98)
T 3tes_A           77 GGHRSNPLSAEFTTG   91 (98)
T ss_dssp             TTEEBCCEEEEEECS
T ss_pred             CCcccCCEEEEEEcC
Confidence            987766666666664

>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C

Probab=98.64  E-value=9.6e-08  Score=82.49  Aligned_cols=81  Identities=16%  Similarity=0.164  Sum_probs=62.4

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCCCCCCCc-eeeecCCceeEeecCCcceeeeEEEEecc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEGFPARPT-CTLFAPNTRFVVTGLCPATEYQFKVVSSN  419 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~y~~ept-~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  419 (734)
                      ++..++++.++++||.|-.+....  ....|.||+|+||........+.. .++....++++|.||.|.|.|.|||.+||
T Consensus         7 ~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~v~V~A~n   86 (102)
T 3n1f_C            7 GPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQWHMIGHLQPETSYDIKMQCFN   86 (102)
T ss_dssp             CCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEEEEETTCSEEEECSCCTTCEEEEEEEEEE
T ss_pred             CCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEEEEcCCceEEECCCCCCCCEEEEEEEEEC
Confidence            556889999999999999987753  457899999999986532111222 24445678999999999999999999999


Q ss_pred             CCcc
Q 004714          420 GTTE  423 (734)
Q Consensus       420 ~~~e  423 (734)
                      ..|+
T Consensus        87 ~~G~   90 (102)
T 3n1f_C           87 EGGE   90 (102)
T ss_dssp             TTEE
T ss_pred             CCcC
Confidence            8765

>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.64  E-value=1.9e-07  Score=78.81  Aligned_cols=92  Identities=21%  Similarity=0.200  Sum_probs=70.5

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          341 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       341 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      .|.+..+++..++++||+|...........|.||.|.|+.....  ..-...+....+.+.|.||.|.|.|.|||.+++.
T Consensus         7 ~P~~p~~~v~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~   84 (107)
T 2dn7_A            7 GPGRPTMMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEA--RPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKNR   84 (107)
T ss_dssp             CCCCCEEEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCS--SCEEEEEETTCCEEEEECCCTTCEEEEEEEEEET
T ss_pred             CCCCCcEeEEecCCCEEEEEECCCCCCCCceeEEEEEEEECCCC--CCEEEEeCCCccEEEeCCCCCCCEEEEEEEEEcC
Confidence            34444488999999999999988654455799999999987643  1112345667789999999999999999999999


Q ss_pred             CccCcceeeEEecC
Q 004714          421 TTELGRCEIWFSTG  434 (734)
Q Consensus       421 ~~elg~~E~k~~T~  434 (734)
                      .|.=-.++..+.|.
T Consensus        85 ~G~g~~s~~~~~T~   98 (107)
T 2dn7_A           85 AGLGEEFEKEIRTP   98 (107)
T ss_dssp             TEEEEEEEEEEECC
T ss_pred             CcccCCeeeEEeCC
Confidence            87655566666663

>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=1.7e-07  Score=82.93  Aligned_cols=89  Identities=13%  Similarity=0.082  Sum_probs=73.2

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          341 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       341 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      +.++..++|.+|+++|+.|-++...   ..|.||+|-|+........  ...+....+.+.|.||.|.|+|.|+|.+|++
T Consensus         8 ~~pP~~l~~~~vt~tsi~vsW~pp~---~~i~~Y~I~y~~~~~~~~~--~~~v~~~~t~~~l~~L~p~T~Y~v~V~A~~~   82 (108)
T 2ee3_A            8 LAPPRHLGFSDVSHDAARVFWEGAP---RPVRLVRVTYVSSEGGHSG--QTEAPGNATSAMLGPLSSSTTYTVRVTCLYP   82 (108)
T ss_dssp             CCCSSCEEEESCCSSCEEEEESCCS---SCCSEEEEEEEETTTCCBC--CEEEETTCCEEEECSCCSSCEEEEEEEEECT
T ss_pred             CCCCceEEEEEccCCeEEEEeeCCC---CCccEEEEEEEeCCCCcee--EEEcCCCcCEEEcCCCCCCCEEEEEEEEEeC
Confidence            4566789999999999999998642   5699999999987553211  2345567889999999999999999999999


Q ss_pred             CccCcceeeEEecC
Q 004714          421 TTELGRCEIWFSTG  434 (734)
Q Consensus       421 ~~elg~~E~k~~T~  434 (734)
                      .|+-..++..+.|.
T Consensus        83 ~g~s~p~~~~~~T~   96 (108)
T 2ee3_A           83 GGGSSTLTGRVTTK   96 (108)
T ss_dssp             TSCEEEEEEEEECC
T ss_pred             CCcCCCccCEEEeC
Confidence            99888888888886

>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.63  E-value=2.9e-07  Score=78.22  Aligned_cols=87  Identities=15%  Similarity=0.209  Sum_probs=68.3

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  424 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  424 (734)
                      ..+++++++++||.|.+.........|.||.|.|+.....  ..-..++....+.+.|.||.|.|.|.|+|.+++..| .
T Consensus        12 ~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G-~   88 (108)
T 2djs_A           12 PIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHN--EFNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAG-Y   88 (108)
T ss_dssp             SCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSC--STTCEEEEESSSEEEEESCCTTCEEEEEEEEEESSC-E
T ss_pred             cceEEEecCCCEEEEEECCCCCCCCeEEEEEEEEEECCCC--CcceeEEecCccEEEEcCCCCCCEEEEEEEEEeCCE-E
Confidence            3578999999999999988754455699999999987653  112346677889999999999999999999999987 4


Q ss_pred             cce--eeEEecC
Q 004714          425 GRC--EIWFSTG  434 (734)
Q Consensus       425 g~~--E~k~~T~  434 (734)
                      |.+  .+.+.|.
T Consensus        89 g~~S~~~~~~T~  100 (108)
T 2djs_A           89 GKFSGKMCFQTL  100 (108)
T ss_dssp             EEECCCEEEECC
T ss_pred             CCCCCCEEEEeC
Confidence            443  4455554

>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.58  E-value=2.9e-07  Score=78.75  Aligned_cols=87  Identities=21%  Similarity=0.196  Sum_probs=68.0

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      ++..++++.++++||+|-++........|.||.|+||..... .     .++....+.+.|.||.|.|+|.|||.+++..
T Consensus        20 ~P~~l~~~~~~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~-----~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~   94 (116)
T 1x5g_A           20 PAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKE-----QDVDVSSHSYTINGLKKYTEYSFRVVAYNKH   94 (116)
T ss_dssp             CCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCC-----CCEEECSSEEEECSCCTTCEEEEEEEEECSS
T ss_pred             CCCccEEEecCCCEEEEEEeCCCCCCCcccEEEEEEEECCCCcc-----EEEecCCceEEEcCCCCCCEEEEEEEEEcCC
Confidence            445789999999999999987765556799999999987654 2     3455578999999999999999999999998


Q ss_pred             ccCccee-eEEecC
Q 004714          422 TELGRCE-IWFSTG  434 (734)
Q Consensus       422 ~elg~~E-~k~~T~  434 (734)
                      |.=..++ +.+.|.
T Consensus        95 G~g~~S~~~~~~T~  108 (116)
T 1x5g_A           95 GPGVSTPDVAVRTL  108 (116)
T ss_dssp             CCCCBCCCCCEECC
T ss_pred             CcCCCCCCEEEECC
Confidence            7522232 444443

>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.56  E-value=3.6e-07  Score=78.88  Aligned_cols=92  Identities=22%  Similarity=0.254  Sum_probs=69.7

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCC-CCCC-----CceeeecCCceeEeecCCcceeeeEE
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEG-FPAR-----PTCTLFAPNTRFVVTGLCPATEYQFK  414 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~-y~~e-----pt~~~~~p~~r~~vs~L~P~TEY~fk  414 (734)
                      ++..+++..++++||+|-.+....  ....|.||+|+||..... ....     ....+..+.+.+.|.||.|.|.|.|+
T Consensus        17 ~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~   96 (125)
T 1uen_A           17 APGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLN   96 (125)
T ss_dssp             CCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCSEEEEESCCSSCEEEEE
T ss_pred             CCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEecCCccEEEeCCCCCCCEEEEE
Confidence            445788999999999999988742  345799999999988765 3211     13345677899999999999999999


Q ss_pred             EEeccCCccCccee-eEEecC
Q 004714          415 VVSSNGTTELGRCE-IWFSTG  434 (734)
Q Consensus       415 vvsF~~~~elg~~E-~k~~T~  434 (734)
                      |.+|+..|.=-.++ +.+.|.
T Consensus        97 V~A~n~~G~g~~S~~~~~~T~  117 (125)
T 1uen_A           97 VRVVNGKGEGPASPDRVFNTP  117 (125)
T ss_dssp             EEEEESSCEEEECCCEEEECC
T ss_pred             EEEecCCCCCCCCCCEEEECC
Confidence            99999988622233 455554

>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.55  E-value=7.6e-07  Score=77.78  Aligned_cols=90  Identities=22%  Similarity=0.330  Sum_probs=67.8

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      +..+++..++++||+|.+.........|.||.|+|+........--..++....+.+.|.||.|.|.|.|||.+++..|.
T Consensus        31 P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~  110 (130)
T 1wfo_A           31 PMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGW  110 (130)
T ss_dssp             CCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCEEEECTTCCEEEEESCCSSSEEEEEEEEECSSCE
T ss_pred             CCceEEEecCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCceEEEEEeCCCceEEEEcCCCCCCEEEEEEEEEeCCcC
Confidence            34589999999999999987654455699999999987543111112256677899999999999999999999999886


Q ss_pred             Ccceee-EEec
Q 004714          424 LGRCEI-WFST  433 (734)
Q Consensus       424 lg~~E~-k~~T  433 (734)
                      =-.++. .+.|
T Consensus       111 g~~S~~~~~~T  121 (130)
T 1wfo_A          111 GEAAEALVVTT  121 (130)
T ss_dssp             EEEEEEEEECC
T ss_pred             CCCcccEEEec
Confidence            333444 3444

>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}

Probab=98.54  E-value=4.5e-07  Score=78.22  Aligned_cols=81  Identities=19%  Similarity=0.174  Sum_probs=64.1

Q ss_pred             CcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 004714          340 NVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  418 (734)
Q Consensus       340 ~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  418 (734)
                      .+.++..+++.+++++||+|-..........|.||.|.|+..... ..  -...+....+.+.|.||.|.|+|.|+|.++
T Consensus         7 ~~~~P~~l~v~~~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~--~~~~v~~~~ts~~l~~L~p~t~Y~~~V~A~   84 (103)
T 3t04_D            7 VSSVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPV--QEFTVPGYYSTATISGLKPGVDYTITVYAY   84 (103)
T ss_dssp             CCCCCCSCEEEEEETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCC--EEEEEETTCCEEEECSCCTTCCEEEEEEEE
T ss_pred             cCCCCceeEEEecCCCEEEEEccCCCCCCCccceEEEEEEECCCCCcc--EEEEcCCCcCEEEeCCCCCCCEEEEEEEEE
Confidence            344566799999999999999987654456799999999986432 11  123456678999999999999999999999


Q ss_pred             cC--Cc
Q 004714          419 NG--TT  422 (734)
Q Consensus       419 ~~--~~  422 (734)
                      +.  .|
T Consensus        85 ~~~~~G   90 (103)
T 3t04_D           85 DTFFPG   90 (103)
T ss_dssp             SCCCTT
T ss_pred             eCCCCC
Confidence            87  55

>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A

Probab=98.53  E-value=4.1e-07  Score=78.46  Aligned_cols=88  Identities=19%  Similarity=0.279  Sum_probs=69.8

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCc-eeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPT-CTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept-~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      ++..+++.+|+++||+|-+....   ..|.||.|.|+.....  .+.. ..+....+.+.|.||.|.|+|.|+|.++++.
T Consensus         5 ~P~~l~v~~~t~~sv~lsW~~p~---~~i~~Y~v~y~~~~~~--~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~~~~   79 (104)
T 2rb8_A            5 APSQIEVKDVTDTTALITWMPPS---QPVDGFELTYGIKDVP--GDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRGD   79 (104)
T ss_dssp             CCEEEEEESCCSSCEEEEEECCS---SCCSEEEEEEEETTCT--TCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CCCccEEEEecCCeEEEEEcCCC---CccceEEEEEEECcCC--CceEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEeCC
Confidence            45578999999999999996553   5699999999875421  1122 2356778999999999999999999999999


Q ss_pred             ccCcceeeEEecCc
Q 004714          422 TELGRCEIWFSTGS  435 (734)
Q Consensus       422 ~elg~~E~k~~T~s  435 (734)
                      |.-......+.|.-
T Consensus        80 g~s~p~~~~~~T~~   93 (104)
T 2rb8_A           80 MSSNPAKETFTTGL   93 (104)
T ss_dssp             EECCCEEEEEECCC
T ss_pred             ccCCCEEEEEECCC
Confidence            88777777777753

>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.52  E-value=4.1e-07  Score=76.00  Aligned_cols=88  Identities=22%  Similarity=0.236  Sum_probs=67.1

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCce-eeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          342 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTC-TLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       342 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~-~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      .++..+++.+++++||+|-.+...   ..|.||.|.|+.......  ... ++..+.+.+.|.||.|.|+|.|+|.++++
T Consensus         3 ~~P~~l~~~~~~~~si~lsW~~p~---~~i~~Y~v~y~~~~~~~~--~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~~~   77 (94)
T 1j8k_A            3 DRPKGLAFTDVDVDSIKIAWESPQ---GQVSRYRVTYSSPEDGIH--ELFPAPDGEEDTAELQGLRPGSEYTVSVVALHD   77 (94)
T ss_dssp             CCCCCCEEEEEETTEEEEECCCCS---SCCSCEEEEEEETTTEEE--EECCCCCSSCCEEEECSCCCCSEEEEEEEECSS
T ss_pred             CCCCccEEEeecCCEEEEEEcCCC---CCcceEEEEEEeCCCCCc--eEEecCCCCccEEEeCCCCCCCEEEEEEEEEcC
Confidence            455678999999999999996654   569999999987643200  011 12346889999999999999999999999


Q ss_pred             CccCcceeeEEecC
Q 004714          421 TTELGRCEIWFSTG  434 (734)
Q Consensus       421 ~~elg~~E~k~~T~  434 (734)
                      .|+-........|.
T Consensus        78 ~g~s~p~~~~~~T~   91 (94)
T 1j8k_A           78 DMESQPLIGTQSTA   91 (94)
T ss_dssp             SCCCCCEEEEEECC
T ss_pred             CCcCCCEEeEEEec
Confidence            88766677666664

>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.49  E-value=5e-07  Score=78.71  Aligned_cols=91  Identities=16%  Similarity=0.140  Sum_probs=67.4

Q ss_pred             CceEEEEEeeceeEEEEeCcC--CCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          344 PNMVKFEDVRATSLTVVLGSE--DPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~--~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      +-.+++..+++++|+|-++..  ......|.||.|+||..... ........+....+.+.|.||.|.|.|.|||.+++.
T Consensus        22 P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~  101 (134)
T 2edx_A           22 PQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDGISREHSSWDLVGLEKWTEYRVWVRAHTD  101 (134)
T ss_dssp             SEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCEEECCCBTTCSEEEEESCCTTCEEEEEEEEEET
T ss_pred             CcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccEEEEeeCCCccEEEeCCCCCCCEEEEEEEEEcC
Confidence            448999999999999999887  33456799999999987654 111111122467899999999999999999999999


Q ss_pred             CccCccee-eEEecC
Q 004714          421 TTELGRCE-IWFSTG  434 (734)
Q Consensus       421 ~~elg~~E-~k~~T~  434 (734)
                      .|.=-.++ +.+.|.
T Consensus       102 ~G~g~~S~~~~~~T~  116 (134)
T 2edx_A          102 VGPGPESSPVLVRTD  116 (134)
T ss_dssp             TBCCCCCCCEEEECC
T ss_pred             CCcCCCCCCEEeecC
Confidence            87432333 455554

>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.49  E-value=4.3e-07  Score=77.09  Aligned_cols=87  Identities=26%  Similarity=0.369  Sum_probs=67.9

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  424 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  424 (734)
                      ..+++..++++||+|.++........|.||.|+||.....  .....++....+.+.|.+|.|.|.|.|||.+++..|. 
T Consensus        15 ~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~-   91 (111)
T 1x5l_A           15 VVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKE--MQSYSTLKAVTTRATVSGLKPGTRYVFQVRARTSAGC-   91 (111)
T ss_dssp             CCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSC--CSSCEEEEESSSEEEECSCCTTCEEEECEEEEETTEE-
T ss_pred             ceEEEEEcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCC--ceeEEEecCCCCEEEEcCCCCCCEEEEEEEEEeCCcC-
Confidence            4678889999999999987754455699999999987532  2233466778899999999999999999999999885 


Q ss_pred             cce--eeEEecC
Q 004714          425 GRC--EIWFSTG  434 (734)
Q Consensus       425 g~~--E~k~~T~  434 (734)
                      |.+  .+.+.|.
T Consensus        92 g~~S~~~~~~T~  103 (111)
T 1x5l_A           92 GRFSQAMEVETG  103 (111)
T ss_dssp             CCCCCCEEEECC
T ss_pred             CCCcccEEEEcC
Confidence            543  3444443

>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.48  E-value=4.4e-07  Score=77.22  Aligned_cols=86  Identities=23%  Similarity=0.298  Sum_probs=66.2

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ++..+++..++++||+|.++....  ..|.||.|+||.....   +...+...+.+.+.|.||.|.|+|.|||.+++..|
T Consensus        20 ~P~~l~~~~~~~~sv~l~W~~p~~--~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G   94 (115)
T 1x5z_A           20 QPLNFKAEPESETSILLSWTPPRS--DTIANYELVYKDGEHG---EEQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQG   94 (115)
T ss_dssp             CCEEEEEECSSSSEEEEEEECCSC--CCCCEEEECBEESSSC---CCBCCEECSSSEEEEECCCTTCEEEECEEEECSSC
T ss_pred             CCccCEeeeCCCCEEEEEEcCCCC--CCccEEEEEEEeCCCC---CceEEecCCCcEEEECCCCCCCeEEEEEEEECCCc
Confidence            455789999999999999977643  2799999999987654   11334456789999999999999999999999987


Q ss_pred             cCcce--eeEEecC
Q 004714          423 ELGRC--EIWFSTG  434 (734)
Q Consensus       423 elg~~--E~k~~T~  434 (734)
                      . |.+  .+.+.|.
T Consensus        95 ~-g~~S~~~~~~T~  107 (115)
T 1x5z_A           95 L-GASTAEISARTM  107 (115)
T ss_dssp             E-EEECCCEEEECC
T ss_pred             c-cCCCcCEEEecC
Confidence            4 432  2445553

>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.46  E-value=1.1e-06  Score=75.93  Aligned_cols=89  Identities=18%  Similarity=0.118  Sum_probs=66.5

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      +..+++..++++||+|-+.....  ..|.||.|.||.....-...-...+....+.+.|.||.|.|+|.|+|.+|+..|.
T Consensus        22 P~~l~~~~~~~~sv~l~W~~p~~--g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~   99 (119)
T 2ee2_A           22 PTEVGVKVLSSSEISVHWEHVLE--KIVESYQIRYWAAHDKEEAANRVQVTSQEYSARLENLLPDTQYFIEVGACNSAGC   99 (119)
T ss_dssp             CCSCEEEEEETTEEEEECCCCSC--TTCCEEEEEEEESSSCGGGCEEEEEETTCSEEEECSCCTTCEEEEEEEEECSSSC
T ss_pred             CCcEEEEEccCCEEEEEecCCCC--CccceEEEEEEECCCcccCcEEEEcCCCEeEEEECCCCCCCEEEEEEEEEcCCcc
Confidence            34789999999999999987765  6799999999887543111112234556789999999999999999999999885


Q ss_pred             Cccee-eEEecC
Q 004714          424 LGRCE-IWFSTG  434 (734)
Q Consensus       424 lg~~E-~k~~T~  434 (734)
                      =-.++ +.+.|.
T Consensus       100 g~~S~~~~~~T~  111 (119)
T 2ee2_A          100 GPPSDMIEAFTK  111 (119)
T ss_dssp             CCCCCCEEEECC
T ss_pred             CCCCCCEEEECC
Confidence            33333 455554

>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.45  E-value=6.7e-07  Score=75.67  Aligned_cols=88  Identities=16%  Similarity=0.177  Sum_probs=66.7

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ++..++++.++++||+|..+........|.||+|+||.....   + ...+....+.+.|.||.|.|.|.|+|.+++..|
T Consensus        10 ~P~~l~~~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~---~-~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G   85 (106)
T 2ed8_A           10 PVENLQAVSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTG---K-EQNIEVDGLSYKLEGLKKFTEYSLRFLAYNRYG   85 (106)
T ss_dssp             CCEEEEEECSSTTEEEEEEECCSSCSSCCCEEEEEEEETTTC---C-EEEEEECSSCEEEESCCTTCEEEEEEEEECSSC
T ss_pred             CCceeEEEecCCCEEEEEECCCCCCCCCeeEEEEEEEECCCC---c-eEEEeCCccEEEECCCCCCCEEEEEEEEEeCCc
Confidence            345789999999999999987754456799999999987543   1 124455689999999999999999999999987


Q ss_pred             cCccee-eEEecC
Q 004714          423 ELGRCE-IWFSTG  434 (734)
Q Consensus       423 elg~~E-~k~~T~  434 (734)
                      .=..++ +.+.|.
T Consensus        86 ~g~~S~~~~~~T~   98 (106)
T 2ed8_A           86 PGVSTDDITVVTL   98 (106)
T ss_dssp             EEEECCCEEEECC
T ss_pred             cCCCcCCEEEEcC
Confidence            422233 444443

>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.45  E-value=5.3e-07  Score=77.20  Aligned_cols=92  Identities=16%  Similarity=0.155  Sum_probs=68.4

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ++..+++..++++||+|-.+........|.||.|.|+.........-..+.....+.+.|.+|.|.|.|.|||.+++..|
T Consensus        21 ~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G  100 (121)
T 2dlh_A           21 APRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTIGNLVPQKTYSVKVLAFTSIG  100 (121)
T ss_dssp             CCEEEEECCCSSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTTSCCCCCSSCSEECCBSCCSSCEEEEEEEEEESSC
T ss_pred             CCcccEEEecCCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCccccEEEecCCceEEEecCCCCCCEEEEEEEEEeCCc
Confidence            44578999999999999998875455669999999998754311111222345788999999999999999999999987


Q ss_pred             cCcce-eeEEecC
Q 004714          423 ELGRC-EIWFSTG  434 (734)
Q Consensus       423 elg~~-E~k~~T~  434 (734)
                      .=-.+ .+.+.|.
T Consensus       101 ~g~~S~~~~~~T~  113 (121)
T 2dlh_A          101 DGPLSSDIQVITQ  113 (121)
T ss_dssp             BCCCCCCEEEECC
T ss_pred             cCCCCCCEEEECC
Confidence            63233 3555554

>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.44  E-value=1.4e-06  Score=75.22  Aligned_cols=91  Identities=19%  Similarity=0.176  Sum_probs=71.9

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          342 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       342 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      .++..+++.+|+++||+|-+....   ..|.||.|-|+......  . ...+....+.+.|.||.|.|+|.|+|.++++.
T Consensus         9 ~~P~~l~v~~~~~~sv~lsW~~p~---~~i~~Y~i~y~~~~~~~--~-~~~~~~~~ts~~l~~L~p~t~Y~~~V~A~~~~   82 (105)
T 2cum_A            9 EAPRDLEAKEVTPRTALLTWTEPP---VRPAGYLLSFHTPGGQT--Q-EILLPGGITSHQLLGLFPSTSYNARLQAMWGQ   82 (105)
T ss_dssp             CCCEEEEEESCCSSCEEEEEECCS---SCCSEEEEEEECTTSCE--E-EEEECSSCSEEEECSCCTTCEEEEEEEEEBTT
T ss_pred             CCCCceEEEeccCCEEEEEEcCCC---CccceEEEEEEeCCCce--E-EEEECCCccEEEECCCCCCCEEEEEEEEEeCC
Confidence            345678999999999999986543   36999999988754321  1 22456678999999999999999999999998


Q ss_pred             ccCcceeeEEecCcccc
Q 004714          422 TELGRCEIWFSTGSSRD  438 (734)
Q Consensus       422 ~elg~~E~k~~T~s~e~  438 (734)
                      |.-......+.|.....
T Consensus        83 g~s~~~~~~~~T~~~~~   99 (105)
T 2cum_A           83 SLLPPVSTSFTTGGLRI   99 (105)
T ss_dssp             BCCCCEEEEEECCCSCC
T ss_pred             cccCCEEEEEEeCCcCC
Confidence            88778888888875443

>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}

Probab=98.44  E-value=1.5e-06  Score=73.17  Aligned_cols=86  Identities=22%  Similarity=0.248  Sum_probs=64.7

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCC-ceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          342 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARP-TCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       342 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ep-t~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      .++..+++.+++++||+|.+...   ...|.||.|.|+.....  ... ...+....+.+.|.||.|.|+|.|+|.+++.
T Consensus         3 ~~P~~l~v~~~~~~sv~l~W~~p---~~~i~~Y~v~y~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~   77 (98)
T 3teu_A            3 DAPTDLQVTNVTDTSITVSWTPP---SATITGYRITYTPSNGP--GEPKELTVPPSSTSVTITGLTPGVEYVVSVYALKD   77 (98)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECC---SSCCSEEEEEEEETTSC--SCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEET
T ss_pred             CCCCceEEEEecCCEEEEEEeCC---CCcccEEEEEEEECCCC--CceEEEEcCCCcCEEEecCCCCCCEEEEEEEEEeC
Confidence            35567899999999999998866   36799999999965442  112 2234567889999999999999999999998


Q ss_pred             CccCcceeeEEe
Q 004714          421 TTELGRCEIWFS  432 (734)
Q Consensus       421 ~~elg~~E~k~~  432 (734)
                      .|.--..-....
T Consensus        78 ~G~s~p~~~~~~   89 (98)
T 3teu_A           78 NQESPPLVGTQT   89 (98)
T ss_dssp             TEECCCEEEEEE
T ss_pred             CCCCCCeEEEec
Confidence            874333333333

>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.42  E-value=8.1e-07  Score=80.24  Aligned_cols=89  Identities=17%  Similarity=0.104  Sum_probs=63.0

Q ss_pred             ceEEE---EEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCc-e-eeecCCceeEeecCCcceeeeEEEEec
Q 004714          345 NMVKF---EDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPT-C-TLFAPNTRFVVTGLCPATEYQFKVVSS  418 (734)
Q Consensus       345 ~~~rF---E~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept-~-~~~~p~~r~~vs~L~P~TEY~fkvvsF  418 (734)
                      +.|++   +.+++|||.|-.+. ......|.||+|+||+.... -..+-+ . +.....+.++|+||.|.|+|.|+|.+|
T Consensus        17 ~~v~l~~~~a~sstsi~vsW~~-~~~~g~i~gY~V~Y~~~~~~~~~~~~~~~~v~~~~~~~~~l~~L~p~T~Y~~~V~A~   95 (120)
T 1ujt_A           17 VLVRLHNPVVLTPTTVQVTWTV-DRQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPY   95 (120)
T ss_dssp             CCEEECCCCCCBTTEEEEEEEE-SSCCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCCEEEEESCCSSEEEEEEEEEE
T ss_pred             cEEEeeccEEccCceEEEEEcc-CCCCCcEeeEEEEEEECCCCCCCCccEEEEecCCCcCEEEECCCCCCCEEEEEEEEE
Confidence            45555   45589999999884 33557799999999988651 111111 1 223347899999999999999999999


Q ss_pred             cCCccCccee-eEEecC
Q 004714          419 NGTTELGRCE-IWFSTG  434 (734)
Q Consensus       419 ~~~~elg~~E-~k~~T~  434 (734)
                      +..|+=-.++ +.+.|.
T Consensus        96 n~~G~Gp~S~~v~~~T~  112 (120)
T 1ujt_A           96 FNEFQGMDSESKTVRTT  112 (120)
T ss_dssp             SSSCCCCCCCCEEEEEC
T ss_pred             CCCccCCCCCCEEEECC
Confidence            9887543444 556664

>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.42  E-value=2.3e-06  Score=72.92  Aligned_cols=91  Identities=18%  Similarity=0.199  Sum_probs=67.4

Q ss_pred             cCceEEEEEe--eceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 004714          343 VPNMVKFEDV--RATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  419 (734)
Q Consensus       343 ~~~~~rFE~v--t~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  419 (734)
                      ++-.+++..+  +++||+|-.+........|.||.|.|+..... ...--...+....+.+.|.+|.|.|.|.|||.+++
T Consensus        11 ~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n   90 (114)
T 2ede_A           11 APKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLNLDTMYYFRIQARN   90 (114)
T ss_dssp             CCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEEEEETTCCEEEECSCCSSCEEEEEEEEEC
T ss_pred             CCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEEEECCCceEEEEcCCCCCCEEEEEEEEEe
Confidence            4456888888  89999999987754445799999999986543 11111335567889999999999999999999999


Q ss_pred             CCccCcc-ee-eEEecC
Q 004714          420 GTTELGR-CE-IWFSTG  434 (734)
Q Consensus       420 ~~~elg~-~E-~k~~T~  434 (734)
                      ..|. |. ++ +.+.|.
T Consensus        91 ~~G~-g~~S~~~~~~T~  106 (114)
T 2ede_A           91 SKGV-GPLSDPILFRTL  106 (114)
T ss_dssp             SSCB-CCCCCCEEEECC
T ss_pred             CCcC-cCCcccEEEEec
Confidence            9876 43 33 444453

>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=1.1e-06  Score=75.51  Aligned_cols=90  Identities=20%  Similarity=0.189  Sum_probs=67.0

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceee-ecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTL-FAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~-~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      ++..+++.+++++||+|.++..... ..|.||.|.|+.....  ..-...+ ....+.+.|.||.|.|+|.|||.+++..
T Consensus        20 ~P~~l~~~~~~~~sv~l~W~~p~~~-g~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~   96 (118)
T 2yrz_A           20 TPTRLVFSALGPTSLRVSWQEPRCE-RPLQGYSVEYQLLNGG--ELHRLNIPNPAQTSVVVEDLLPNHSYVFRVRAQSQE   96 (118)
T ss_dssp             CCCCCEECCCBTTEEEEECCCCCCS-SCEEEEEEEEEBSSSC--CEEEEEESCTTCCEEEEESCCTTCEEEEEEEEEESS
T ss_pred             CCCceEEEeCCCCEEEEEeCCCCCC-CCccEEEEEEEECCCC--ceEEEEcCCCCcCEEEeCCCCCCCEEEEEEEEEcCC
Confidence            3446799999999999999876543 4799999999986542  1111222 2458999999999999999999999998


Q ss_pred             ccCcceeeEEecCc
Q 004714          422 TELGRCEIWFSTGS  435 (734)
Q Consensus       422 ~elg~~E~k~~T~s  435 (734)
                      |.=-.++..+.+..
T Consensus        97 G~g~~S~~~~~~~t  110 (118)
T 2yrz_A           97 GWGREREGVITIES  110 (118)
T ss_dssp             CEEEEEEEEEECCC
T ss_pred             cCCCCcCCceEeCC
Confidence            85444555555543

>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.41  E-value=2.5e-06  Score=73.08  Aligned_cols=89  Identities=15%  Similarity=0.171  Sum_probs=66.9

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      +..+++++++++||+|-.+........|.||.|.||..... ......++....+.++|.||.|.|+|.|||.+++..|.
T Consensus        11 p~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~   89 (109)
T 2e7h_A           11 VSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAE-GPSSVRFLKTSENRAELRGLKRGASYLVQVRARSEAGY   89 (109)
T ss_dssp             CCCCEEEEEETTEEEEECCCCCCSSSCCCEEEEEEEETTCC-STTTSEEEEESSSEEEEESCCTTSCEEEEEEEECSSCB
T ss_pred             CCccEEEecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCC-CCceeEEEccCCCEEEECCCCCCCeEEEEEEEEeCCcc
Confidence            34688999999999999988764445699999999987521 11122345667889999999999999999999999873


Q ss_pred             Ccce--eeEEecC
Q 004714          424 LGRC--EIWFSTG  434 (734)
Q Consensus       424 lg~~--E~k~~T~  434 (734)
                       |.+  .+.+.|.
T Consensus        90 -g~~S~~~~~~T~  101 (109)
T 2e7h_A           90 -GPFGQEHHSQTQ  101 (109)
T ss_dssp             -CCCCSCEECCCC
T ss_pred             -CCCCCCEEEEcC
Confidence             432  3445554

>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.41  E-value=2.6e-06  Score=73.02  Aligned_cols=91  Identities=18%  Similarity=0.146  Sum_probs=66.6

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCC-CCCCCcee--eecCCceeEeecCCcceeeeEEEEe
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEG-FPARPTCT--LFAPNTRFVVTGLCPATEYQFKVVS  417 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~-y~~ept~~--~~~p~~r~~vs~L~P~TEY~fkvvs  417 (734)
                      ++..+++..+++++|+|-......  ....|.||.|.||..... ........  .....+.+.|.||.|.|.|.|+|.+
T Consensus        18 ~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A   97 (122)
T 1va9_A           18 PPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQA   97 (122)
T ss_dssp             CCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEEESCCSSCCEEEEEEE
T ss_pred             CCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEEEEecCCceeEEEeCCCCCCCEEEEEEEE
Confidence            345799999999999999988764  456799999999988653 21111111  1234589999999999999999999


Q ss_pred             ccCCccCccee-eEEec
Q 004714          418 SNGTTELGRCE-IWFST  433 (734)
Q Consensus       418 F~~~~elg~~E-~k~~T  433 (734)
                      ++..|.=-.++ +.+.|
T Consensus        98 ~n~~G~g~~S~~~~~~T  114 (122)
T 1va9_A           98 FNRAGTGPSSSEINATT  114 (122)
T ss_dssp             EETTEECCCCCCEECCC
T ss_pred             EcCCCCCCCccCEEEEe
Confidence            99988622333 44444

>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A

Probab=98.40  E-value=1.6e-06  Score=74.30  Aligned_cols=80  Identities=16%  Similarity=0.233  Sum_probs=63.3

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          342 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       342 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      .++..+++.+++++||+|-..... ....|.||.|-|+..... ...-...+....+.+.|.||.|.|+|.|+|.++++.
T Consensus         6 ~~P~~l~v~~~t~~Sv~l~W~~p~-~~~~i~~Y~v~y~~~~~~-~~~~~~~v~~~~t~~~l~~L~p~t~Y~~~V~A~~~~   83 (101)
T 3k2m_C            6 SVPTKLEVVAATPTSLLISWDAPM-SSSSVYYYRITYGETGGN-SPVQEFTVPYSSSTATISGLSPGVDYTITVYAWGED   83 (101)
T ss_dssp             BSSCEEEEEEEETTEEEEEECCCC-TTSCCCEEEEEEEETTCS-SCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEEC
T ss_pred             CCCcceEEeecCCCEEEEEecCCC-CCCceeeEEEEEEECCCC-CccEEEEcCCCccEEEECCCCCCCEEEEEEEEEeCC
Confidence            355679999999999999998754 235799999999986432 011123466778999999999999999999999987


Q ss_pred             cc
Q 004714          422 TE  423 (734)
Q Consensus       422 ~e  423 (734)
                      ++
T Consensus        84 ~~   85 (101)
T 3k2m_C           84 SA   85 (101)
T ss_dssp             TT
T ss_pred             cc
Confidence            76

>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.40  E-value=2.5e-06  Score=73.68  Aligned_cols=87  Identities=24%  Similarity=0.274  Sum_probs=67.8

Q ss_pred             CceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      +..+++..++++||+|-++....  ....|.||+|.||.....   ....++....+.+.|.||.|.|.|.|||.+++..
T Consensus        32 P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~  108 (124)
T 2ed9_A           32 PQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRR---GEMETLEPNNLWYLFTGLEKGSQYSFQVSAMTVN  108 (124)
T ss_dssp             CBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSS---CCEEEECSSCSEEEEECCCSSCEEEECEEEECSS
T ss_pred             CeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCC---cceEEecCCcCEEEEcCCCCCCEEEEEEEEEcCC
Confidence            44788999999999999988765  456799999999987654   1123466788999999999999999999999998


Q ss_pred             ccCccee-eEEec
Q 004714          422 TELGRCE-IWFST  433 (734)
Q Consensus       422 ~elg~~E-~k~~T  433 (734)
                      |.=-.++ +.+.|
T Consensus       109 G~g~~S~~~~~~T  121 (124)
T 2ed9_A          109 GTGPPSNWYTAET  121 (124)
T ss_dssp             CBCCCCCCEEEEC
T ss_pred             ccCCCCCCEEEEC
Confidence            7433333 44444

>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.39  E-value=2.5e-06  Score=73.39  Aligned_cols=88  Identities=15%  Similarity=0.166  Sum_probs=65.3

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          342 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       342 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      .++-.+++.+++++||+|-+....    .+.||.|.|+........... .+..+...+.|+||.|.|+|.|+|.++++.
T Consensus        10 ~~P~~l~~~~~~~~sv~lsW~~p~----~~~~Y~v~y~~~~~~~~~~~~-~~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~   84 (104)
T 2dkm_A           10 PPPRALTLAAVTPRTVHLTWQPSA----GATHYLVRCSPASPKGEEEER-EVQVGRPEVLLDGLEPGRDYEVSVQSLRGP   84 (104)
T ss_dssp             CCCCCCEEEEECSSEEEEECCCCS----SCSEEEEEEEESSSCCSSCCE-EEEESSSEEEEESCCTTCCEEEEEEEECSS
T ss_pred             CCCceeEEEecCCCEEEEEEeCCC----CCCeEEEEEEECCCCCCcceE-EEecCCCEEEECCCCCCCEEEEEEEEECCC
Confidence            355678999999999999996543    259999999976542111222 233344499999999999999999999987


Q ss_pred             ccCcceeeEEecC
Q 004714          422 TELGRCEIWFSTG  434 (734)
Q Consensus       422 ~elg~~E~k~~T~  434 (734)
                      +.-....+.+.|.
T Consensus        85 ~~s~p~~~~~~T~   97 (104)
T 2dkm_A           85 EGSEARGIRARTP   97 (104)
T ss_dssp             SBCCCEEEECCCC
T ss_pred             CCCCCEEEEEEcC
Confidence            7766666666664

>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.39  E-value=9.1e-07  Score=77.05  Aligned_cols=86  Identities=13%  Similarity=0.126  Sum_probs=68.5

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ++..+++.+|+++||+|-+....   ..|.||.|.|+.....   .-...+....+.+.|.||.|.|+|.|+|.++++.+
T Consensus        10 ~P~~l~~~~~t~~sv~lsW~~p~---~~i~~Y~v~y~~~~~~---~~~~~v~~~~t~~~l~~L~P~t~Y~~~V~A~~~~~   83 (115)
T 2cuh_A           10 GPTQLRALNLTEGFAVLHWKPPQ---NPVDTYDIQVTAPGAP---PLQAETPGSAVDYPLHDLVLHTNYTATVRGLRGPN   83 (115)
T ss_dssp             SCEEEECCCCSSSCEEEEEECCS---SCCSEEEEEEECSSSC---CEEEEEETTCSEEEECSCCSSSEEEEEEEEEETTE
T ss_pred             CCcceEEEeccCCeEEEEEECCC---CCccEEEEEEEcCCCC---cEEEEECCCccEEEEeCCCCCCEEEEEEEEEeCCC
Confidence            45578999999999999986543   4699999999875432   11234567789999999999999999999999888


Q ss_pred             cCcceeeEEecC
Q 004714          423 ELGRCEIWFSTG  434 (734)
Q Consensus       423 elg~~E~k~~T~  434 (734)
                      .-......+.|.
T Consensus        84 ~s~~~~~~~~T~   95 (115)
T 2cuh_A           84 LTSPASITFTTG   95 (115)
T ss_dssp             ECCCEEEEEESC
T ss_pred             cCCCEEEEEEeC
Confidence            766677777775

>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.38  E-value=1.2e-06  Score=75.25  Aligned_cols=79  Identities=18%  Similarity=0.272  Sum_probs=62.5

Q ss_pred             cCceEEEEEeeceeEEEEeCcCC-CCCCCcceEEEEeeecCCCCCCCCc-eeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          343 VPNMVKFEDVRATSLTVVLGSED-PSPGNIISYTLWHRRAHEGFPARPT-CTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~-~s~~~i~Gy~LWhrks~~~y~~ept-~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      ++..+++..++++||+|.++... .....|.||.|.|+.....  .... .++....+.+.|.||.|.|+|.|||.+++.
T Consensus        20 ~P~~l~~~~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~   97 (120)
T 1x5f_A           20 APRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIA--RERVENTSHPGEMQVTIQNLMPATVYIFRVMAQNK   97 (120)
T ss_dssp             CCEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCC--CCEEEECSSTTCSEEEECSCCTTCEEEEEEEEECS
T ss_pred             CCCCcEEEecCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCC--CceEEEeccCCccEEEeCCCCCCCEEEEEEEEECC
Confidence            44578999999999999998876 4455899999999987542  1111 122345889999999999999999999999


Q ss_pred             Ccc
Q 004714          421 TTE  423 (734)
Q Consensus       421 ~~e  423 (734)
                      .|.
T Consensus        98 ~G~  100 (120)
T 1x5f_A           98 HGS  100 (120)
T ss_dssp             SCE
T ss_pred             Ccc
Confidence            876

>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.36  E-value=2e-06  Score=75.62  Aligned_cols=82  Identities=21%  Similarity=0.298  Sum_probs=60.9

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCC----CCcceEEEEeeecCCCCCCCC-ceeeecCCceeEeecCCcceeeeEEEE
Q 004714          342 IVPNMVKFEDVRATSLTVVLGSEDPSP----GNIISYTLWHRRAHEGFPARP-TCTLFAPNTRFVVTGLCPATEYQFKVV  416 (734)
Q Consensus       342 ~~~~~~rFE~vt~tSv~vvL~~~~~s~----~~i~Gy~LWhrks~~~y~~ep-t~~~~~p~~r~~vs~L~P~TEY~fkvv  416 (734)
                      .++-.++.+.++++||.|-+.-.....    .++.||.|+||...   ..+. ..++....+.++|.||.|.|+|.|+|.
T Consensus        10 ~~P~~l~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~---~~~~~~~~~~~~~~~~~i~gL~P~T~Y~f~V~   86 (113)
T 1x5j_A           10 MPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNI---PANTKYKNANATTLSYLVTGLKPNTLYEFSVM   86 (113)
T ss_dssp             CCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSS---SSSCCCEECCBCSSEEEEESCCTTCEECCEEE
T ss_pred             CCCcceEEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECC---CCCeEEEEEecCcCEEEeCCCCCCcEEEEEEE
Confidence            355679999999999999987654322    34569999999731   1222 223345688999999999999999999


Q ss_pred             eccCCccCcce
Q 004714          417 SSNGTTELGRC  427 (734)
Q Consensus       417 sF~~~~elg~~  427 (734)
                      +|+..|. |.|
T Consensus        87 A~~~~G~-g~~   96 (113)
T 1x5j_A           87 VTKGRRS-STW   96 (113)
T ss_dssp             EECSSCB-CCC
T ss_pred             EecCCcc-CCC
Confidence            9997764 544

>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.36  E-value=6.9e-07  Score=74.63  Aligned_cols=77  Identities=25%  Similarity=0.378  Sum_probs=63.5

Q ss_pred             cCceEEEEEeeceeEEEEeCcCC--CCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          343 VPNMVKFEDVRATSLTVVLGSED--PSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~--~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      ++..+++..++++||+|-+....  .....|.||.|.||.....    ...++....+.+.|.||.|.|.|.|+|.+++.
T Consensus        11 ~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~----~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~   86 (103)
T 2edy_A           11 FPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQ----QELQNITTDTRFTLTGLKPDTTYDIKVRAWTS   86 (103)
T ss_dssp             CCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSC----CEEEEEESSSCCEECSCCTTCCEEEECCEECS
T ss_pred             CCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCC----ccEEEcCCcceEEEcCCCCCCEEEEEEEEECC
Confidence            34468889999999999998873  3456899999999987652    23455677899999999999999999999998


Q ss_pred             Ccc
Q 004714          421 TTE  423 (734)
Q Consensus       421 ~~e  423 (734)
                      .|.
T Consensus        87 ~G~   89 (103)
T 2edy_A           87 KGS   89 (103)
T ss_dssp             SCB
T ss_pred             CCC
Confidence            876

>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}

Probab=98.35  E-value=1.5e-06  Score=73.67  Aligned_cols=77  Identities=16%  Similarity=0.242  Sum_probs=61.2

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ++..+++.+++++||.|-.+..   ...|.||+|.|+.....- ..-...+...++.+.|.||.|.|+|.|+|.+++..|
T Consensus         7 ~P~~l~v~~~t~~Si~lsW~~p---~~~i~~Y~v~y~~~~~~~-~~~~~~v~~~~t~~~l~~L~p~t~Y~v~V~A~~~~G   82 (97)
T 3qht_C            7 VPTKLEVVAATPTSLLISWDAS---SSSVSYYRITYGETGGNS-PVQEFTVPGSSSTATISGLSPGVDYTITVYAYYSYY   82 (97)
T ss_dssp             SSSSCEEEEEETTEEEEECCCC---CSSCCEEEEEEEESSSCS-CCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEEET
T ss_pred             CCCceEEEecCCCEEEEEEeCC---CCCCCEEEEEEEECCCCC-ccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEeCCc
Confidence            4556899999999999999864   257999999998765431 011234566789999999999999999999999877


Q ss_pred             c
Q 004714          423 E  423 (734)
Q Consensus       423 e  423 (734)
                      +
T Consensus        83 ~   83 (97)
T 3qht_C           83 D   83 (97)
T ss_dssp             T
T ss_pred             c
Confidence            5

>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.35  E-value=1.7e-06  Score=75.75  Aligned_cols=88  Identities=9%  Similarity=-0.004  Sum_probs=66.0

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ++..+++.+++ +||+|-++........|.||.|.|+....   .....++....+.++|.||.|.|+|.|+|.+++..|
T Consensus        20 ~P~~l~~~~~~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~---~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G   95 (116)
T 2edb_A           20 QPSSLHVRPQT-NCIIMSWTPPLNPNIVVRGYIIGYGVGSP---YAETVRVDSKQRYYSIERLESSSHYVISLKAFNNAG   95 (116)
T ss_dssp             CCSCEEEEECS-SCEEEEECCCSCTTBCCCEEEEEEEESST---TSEEEEEETTCCEEEECSCCSSSBEEEEEEEEETTE
T ss_pred             CCCCeEEEECC-CEEEEEEcCCCCCCCceeEEEEEEEeCCC---CeEEEEeCCCeeEEEeCCCCCCCEEEEEEEEEeCCc
Confidence            34468999999 99999998765444569999999986321   223345567789999999999999999999999988


Q ss_pred             cCcceeeEEecC
Q 004714          423 ELGRCEIWFSTG  434 (734)
Q Consensus       423 elg~~E~k~~T~  434 (734)
                      .=-.....+.|.
T Consensus        96 ~g~~~~~~~~T~  107 (116)
T 2edb_A           96 EGVPLYESATTR  107 (116)
T ss_dssp             ECSCEEECCBCC
T ss_pred             cCCCCcceeecc
Confidence            533444444443

>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.35  E-value=6.1e-06  Score=73.57  Aligned_cols=93  Identities=16%  Similarity=0.210  Sum_probs=65.5

Q ss_pred             CCcccCceEEEEEeeceeEEEEeCcCCCCCC----CcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEE
Q 004714          339 SNVIVPNMVKFEDVRATSLTVVLGSEDPSPG----NIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFK  414 (734)
Q Consensus       339 ~~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~----~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fk  414 (734)
                      ....++-.++...++++||.|-+........    ++.||.|+||.....  .....++....+.++|.||.|.|+|.|+
T Consensus        17 ~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~--~~~~~~~~~~~~~~~v~gL~P~T~Y~f~   94 (123)
T 2edd_A           17 TPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSA--SAKYKSEDTTSLSYTATGLKPNTMYEFS   94 (123)
T ss_dssp             CSSCCCEEEEEEEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCT--TCCCCCEEESSSEEEEESCCTTCEEEEE
T ss_pred             CCCCCCcceEEEEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCC--CccEEEEeCCceEEEecCCCCCCEEEEE
Confidence            3444666799999999999999985542222    345999999886321  1111234445899999999999999999


Q ss_pred             EEeccCCccCcce--eeEEecC
Q 004714          415 VVSSNGTTELGRC--EIWFSTG  434 (734)
Q Consensus       415 vvsF~~~~elg~~--E~k~~T~  434 (734)
                      |.+|++.|+ |.|  .+.+.|.
T Consensus        95 V~A~n~~g~-g~~S~~v~~~T~  115 (123)
T 2edd_A           95 VMVTKNRRS-STWSMTAHATTY  115 (123)
T ss_dssp             EEECCSSSC-CCCCCCEEEECC
T ss_pred             EEEeCCCcc-cCCCCCEEEEcc
Confidence            999998765 432  3445553

>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=5e-07  Score=77.68  Aligned_cols=87  Identities=16%  Similarity=0.106  Sum_probs=66.8

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ++..+++.+++++||.|-++...   ..|.||.|.|+.....- ..-...+...++.+.|.||.|.|+|.|+|.+++..|
T Consensus        10 ~P~~l~v~~~t~~si~lsW~~p~---g~i~~Y~v~y~~~~~~~-~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~~~~g   85 (105)
T 2ekj_A           10 PPSNLALASETPDSLQVSWTPPL---GRVLHYWLTYAPASGLG-PEKSVSVPGARSHVTLPDLQAATKYRVLVSAIYAAG   85 (105)
T ss_dssp             CCEEEEEEEEETTEEEEEEECCS---SCCSBBCBBCCCTTSCS-CCCCBCCBTTSSEEEECSCCSSCCCBCBBCBBCSSC
T ss_pred             CCCceEEEeCCCCEEEEEEeCCC---CcceEEEEEEEECCCCC-ccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEeCCc
Confidence            45578999999999999998763   57999999998765430 011234556789999999999999999999999887


Q ss_pred             cCcceeeEEec
Q 004714          423 ELGRCEIWFST  433 (734)
Q Consensus       423 elg~~E~k~~T  433 (734)
                      +-........|
T Consensus        86 ~g~~s~~~~~T   96 (105)
T 2ekj_A           86 RSEAVSATGQT   96 (105)
T ss_dssp             BCCCBCCBCCC
T ss_pred             cCCccccEEEc
Confidence            65555554444

>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.32  E-value=4.4e-06  Score=69.84  Aligned_cols=86  Identities=24%  Similarity=0.273  Sum_probs=63.5

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      +-.+++.++++++|+|-+...  ....|.||.|.||.....  ..-..+.....+++.|.||.|.|+|.|||.+++..|.
T Consensus        11 P~~~~~~~~~~~sv~l~W~~~--~~~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~   86 (106)
T 2dju_A           11 PIDLVVTETTATSVTLTWDSG--NSEPVTYYGIQYRAAGTE--GPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGR   86 (106)
T ss_dssp             CEEEEEEEEETTEEEEEEECC--CSSCCSEEEEEEEETTCC--SCCCCBCCCCSSEEEEESCCTTCEEEEEEEEECSSCB
T ss_pred             CCCcEEEeccCCEEEEEEcCC--CCCCceEEEEEEEECCCC--CCeEEccCCCccEEEEeCCCCCcEEEEEEEEEeCCcc
Confidence            446889999999999998855  346799999999887643  0111122346789999999999999999999999885


Q ss_pred             Cccee-eEEec
Q 004714          424 LGRCE-IWFST  433 (734)
Q Consensus       424 lg~~E-~k~~T  433 (734)
                      -..++ +.+.|
T Consensus        87 ~~~S~~~~~~T   97 (106)
T 2dju_A           87 GPPSEAVRART   97 (106)
T ss_dssp             CCCCCCEEEEC
T ss_pred             CCCcccEEeEc
Confidence            44444 34444

>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.32  E-value=3.1e-06  Score=73.01  Aligned_cols=85  Identities=20%  Similarity=0.204  Sum_probs=65.7

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  424 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  424 (734)
                      ..+++.+++++||+|.+.........|.||.|.|+.....- ..-...+....+.+.|.||.|.|.|.|||.+++..|.=
T Consensus        22 ~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g  100 (119)
T 1wfn_A           22 GHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTN-TRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQG  100 (119)
T ss_dssp             SCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGG-GCCCEEECSSCCEEEEESCCTTCEEEEEEEEECSSCEE
T ss_pred             CceEEEECCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCC-ceEEEEeCCCceEEEEcCCCCCCEEEEEEEEEcCCccC
Confidence            46899999999999999877655556999999999875421 01123455678899999999999999999999998863


Q ss_pred             cceeeE
Q 004714          425 GRCEIW  430 (734)
Q Consensus       425 g~~E~k  430 (734)
                      ..++..
T Consensus       101 ~~S~~~  106 (119)
T 1wfn_A          101 QVSAST  106 (119)
T ss_dssp             EEEEEE
T ss_pred             CCCCCE
Confidence            344444

>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.30  E-value=1.8e-06  Score=73.89  Aligned_cols=90  Identities=22%  Similarity=0.233  Sum_probs=66.1

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ++..+++..++++||+|.+.........|.||.|.|+....... ....++....+.+.|.||.|.|.|.|||.+++..|
T Consensus        20 ~P~~l~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G   98 (119)
T 2ed7_A           20 APRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRE-RALNTTQPGSLQLTVGNLKPEAMYTFRVVAYNEWG   98 (119)
T ss_dssp             CCSCCEEEEECSSCEEEECCCCSCCSSCEEEEEEEEEESSCCCC-EEEECCCTTCCEEEECSCCSSSEEEECCEEEESSC
T ss_pred             CCcceEEEecCCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcc-eeeEeecCCceEEEeCCCCCCCEEEEEEEEEcCCc
Confidence            33468899999999999998765445569999999998755311 11112335688999999999999999999999988


Q ss_pred             cCccee-eEEec
Q 004714          423 ELGRCE-IWFST  433 (734)
Q Consensus       423 elg~~E-~k~~T  433 (734)
                      .=..++ +.+.|
T Consensus        99 ~g~~S~~~~~~T  110 (119)
T 2ed7_A           99 PGESSQPIKVAT  110 (119)
T ss_dssp             BCSCCCCEEEEC
T ss_pred             cCCCcCCEEEEe
Confidence            433343 44444

>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.29  E-value=9.7e-07  Score=77.47  Aligned_cols=91  Identities=9%  Similarity=0.087  Sum_probs=65.9

Q ss_pred             cCceEEEE-EeeceeEEEEeCcCC--CCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 004714          343 VPNMVKFE-DVRATSLTVVLGSED--PSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  419 (734)
Q Consensus       343 ~~~~~rFE-~vt~tSv~vvL~~~~--~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  419 (734)
                      ++-.+++. +++++||+|-.+...  .....|.||+|.|+.....-..+-+..+....+.+.|.||.|.|.|.|||.+|+
T Consensus        21 ~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n  100 (124)
T 2dbj_A           21 APLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLEEVGQNGSRARISVQVHNATCTVRIAAVT  100 (124)
T ss_dssp             CCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEEEEEEEEESTTSCEEEECCCSSSEEEECEEEEE
T ss_pred             CCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCccceEEEeCCCcceEEecCCCCCCEEEEEEEEEC
Confidence            34467888 699999999998873  345679999999975322111111223456788999999999999999999999


Q ss_pred             CCccCcce--eeEEecC
Q 004714          420 GTTELGRC--EIWFSTG  434 (734)
Q Consensus       420 ~~~elg~~--E~k~~T~  434 (734)
                      ..|. |.+  .+.+.|.
T Consensus       101 ~~G~-Gp~S~~~~~~T~  116 (124)
T 2dbj_A          101 RGGV-GPFSDPVKIFIP  116 (124)
T ss_dssp             SSCB-CCCCCCEEEECC
T ss_pred             CCcc-CCCCCCEEEEcC
Confidence            9886 532  3555554

>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*

Probab=98.26  E-value=3.7e-06  Score=74.60  Aligned_cols=76  Identities=20%  Similarity=0.254  Sum_probs=61.1

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ++..+++.+++++||+|-+...   ...|.||.|-|+.....- ..-...+....+.+.|.||.|.|+|.|+|.+++..|
T Consensus         6 ~P~~L~v~~~t~~Sv~lsW~~p---~g~i~~Y~v~y~~~~~~~-~~~~~~v~~~~ts~~l~gL~P~T~Y~v~V~A~~~~G   81 (114)
T 3qwq_B            6 VPRDLEVVAATPTSLLISWDSG---RGSYQYYRITYGETGGNS-PVQEFTVPGPVHTATISGLKPGVDYTITVYAVTDHK   81 (114)
T ss_dssp             CCEEEEEEEEETTEEEEEEECC---SCCCSEEEEEEEESSCSS-CCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEEEE
T ss_pred             CCCceEEEecCCCEEEEEEcCC---cCcccEEEEEEEECCCCC-ccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEECCc
Confidence            3457899999999999999764   357999999999865431 011234567789999999999999999999999998

>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}

Probab=98.26  E-value=1.9e-06  Score=77.15  Aligned_cols=80  Identities=18%  Similarity=0.221  Sum_probs=62.2

Q ss_pred             CcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 004714          340 NVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  419 (734)
Q Consensus       340 ~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  419 (734)
                      ...++..+++.+++++||.|-++...   ..|.||+|.|+....... .-...+....+.+.|.||.|.|+|.|+|.+++
T Consensus        28 p~~~P~~l~v~~~t~~Si~lsW~~p~---~~i~~Y~V~y~~~~~~~~-~~~~~v~~~~t~~~l~gL~P~t~Y~~~V~A~~  103 (121)
T 2ocf_D           28 VSDVPTKLEVVAATPTSLLISWDAPA---VTVRYYRITYGETGGNSP-VQEFTVPGSKSTATISGLKPGVDYTITVYAVT  103 (121)
T ss_dssp             -CCSCEEEEEEEECSSCEEEEEECCS---SCCCEEEEEEEETTTCSC-BEEEEEETTCCEEEECCCCTTCEEEEEEEEEC
T ss_pred             CCCCCCccEEEecCCCEEEEEEcCCC---CCCcEEEEEEEECCCCCc-cEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEe
Confidence            34466689999999999999997553   359999999988754211 11234566789999999999999999999999


Q ss_pred             CCcc
Q 004714          420 GTTE  423 (734)
Q Consensus       420 ~~~e  423 (734)
                      ..|+
T Consensus       104 ~~G~  107 (121)
T 2ocf_D          104 GLRL  107 (121)
T ss_dssp             CHHH
T ss_pred             CCCc
Confidence            8764

>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.26  E-value=2.5e-06  Score=75.73  Aligned_cols=89  Identities=15%  Similarity=0.083  Sum_probs=66.9

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ++..+++..++ +||+|-..........|.||.|.|+....   ......+...++.++|.||.|.|+|.|+|.+|+..|
T Consensus        30 ~P~~l~~~~~~-~sv~l~W~~P~~~~g~i~~Y~v~y~~~~~---~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G  105 (126)
T 1x5i_A           30 VPSSLHVRPLV-TSIVVSWTPPENQNIVVRGYAIGYGIGSP---HAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVG  105 (126)
T ss_dssp             SCSEEEEEEET-TEEEEEEECCSCTTBCCCEEEEEECSSCG---GGEEEECCTTCCEEEECSCCSSCEECCEEEEECSSC
T ss_pred             CCCeeEEEecC-CEEEEEEcCCCCCCCCEeEEEEEEEcCCC---CceEEEeCCCeeEEEEeCCCCCCEEEEEEEEEeCCc
Confidence            34478999997 99999998775444569999999985321   112234456678999999999999999999999988


Q ss_pred             cCcceeeEEecCc
Q 004714          423 ELGRCEIWFSTGS  435 (734)
Q Consensus       423 elg~~E~k~~T~s  435 (734)
                      .=-.++..+.|..
T Consensus       106 ~g~~s~~~~~T~~  118 (126)
T 1x5i_A          106 EGIPLYESAVTRP  118 (126)
T ss_dssp             BCCCCCCCEECCC
T ss_pred             cCcceeeEEeccc
Confidence            6555566666653

>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.24  E-value=5.3e-06  Score=71.02  Aligned_cols=85  Identities=16%  Similarity=0.107  Sum_probs=63.5

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccCc
Q 004714          346 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELG  425 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg  425 (734)
                      .+++.+++++||+|-+.........|.||.|-|+.....+    ..+...+.+++.|.||.|.|.|.|||.+++..|.=-
T Consensus        13 ~~~~~~~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~----~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~g~   88 (106)
T 1x4x_A           13 PPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSM----QICYCGPGLSYEIKGLSPATTYYCRVQALSVVGAGP   88 (106)
T ss_dssp             CCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSC----CEEEEESCSEEEEESCCSSCEEEEEEEEECSSCCCC
T ss_pred             CCEEEEcCCCEEEEEEcCCCCCCCcceEEEEEEEcCCCce----EEEEeCCcceEEEcCCCCCCEEEEEEEEEcCCcCCC
Confidence            4667899999999999876543346999999998764322    234456788999999999999999999999987532


Q ss_pred             ce-eeEEecC
Q 004714          426 RC-EIWFSTG  434 (734)
Q Consensus       426 ~~-E~k~~T~  434 (734)
                      .+ .+.+.|.
T Consensus        89 ~S~~v~~~T~   98 (106)
T 1x4x_A           89 FSEVVACVTP   98 (106)
T ss_dssp             BCCCEEEECC
T ss_pred             CcCCEEEECC
Confidence            22 3455554

>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.23  E-value=7.2e-06  Score=69.84  Aligned_cols=85  Identities=21%  Similarity=0.232  Sum_probs=62.2

Q ss_pred             EEEEEeeceeEEEEeCcCCCC-CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccCc
Q 004714          347 VKFEDVRATSLTVVLGSEDPS-PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELG  425 (734)
Q Consensus       347 ~rFE~vt~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg  425 (734)
                      .++.+++++||+|-+...... ...|.||.|.||.....  ..-.-+.....+.+.|.||.|.|+|.|||.+++..|.-.
T Consensus        14 p~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~   91 (109)
T 1x5x_A           14 PVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSG--YGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSEGKSN   91 (109)
T ss_dssp             CEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSS--CCCEEEEEESCSEEEEESCCSSCEEEEEEEEECSSCEEE
T ss_pred             CEEEEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCC--cceEEeEeCCccEEEECCCCCCCEEEEEEEEEeCCCCcC
Confidence            357899999999999877543 44799999999887542  111123344588999999999999999999999988633


Q ss_pred             cee-eEEec
Q 004714          426 RCE-IWFST  433 (734)
Q Consensus       426 ~~E-~k~~T  433 (734)
                      .++ +.+.|
T Consensus        92 ~S~~~~~~T  100 (109)
T 1x5x_A           92 PSEVVEFTT  100 (109)
T ss_dssp             ECCCEEEEC
T ss_pred             CccCEEeEe
Confidence            333 34444

>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.23  E-value=3.3e-06  Score=74.58  Aligned_cols=79  Identities=18%  Similarity=0.243  Sum_probs=59.9

Q ss_pred             eEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          346 MVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      ..++.+|+.+||+|....... -...|.||.|-||..... +..-  .......+.+.|+||.|.|+|.|||.+++..|.
T Consensus        16 ~P~v~~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~--~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~   93 (112)
T 1bpv_A           16 KPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKA--NFSNILENEFTVSGLTEDAAYEFRVIAKNAAGA   93 (112)
T ss_dssp             CCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEEC--CCSCCCSSEEEECSCCSSCCEEEEEEEECTTSC
T ss_pred             CCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEe--ecccCccCEEEECCCCCCCEEEEEEEEEECCCC
Confidence            456679999999999985543 345699999999986543 2110  012345789999999999999999999999998


Q ss_pred             Ccc
Q 004714          424 LGR  426 (734)
Q Consensus       424 lg~  426 (734)
                      +|.
T Consensus        94 ~s~   96 (112)
T 1bpv_A           94 ISP   96 (112)
T ss_dssp             EEE
T ss_pred             CCC
Confidence            664

>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1

Probab=98.21  E-value=4.1e-06  Score=72.78  Aligned_cols=77  Identities=19%  Similarity=0.188  Sum_probs=58.4

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCC-C-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          346 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHE-G-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~-~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      .+++.+++++||+|-..........|.||.|.||.... . +..- ...+....+.+.|.||.|.|+|.|||.+++..|.
T Consensus        23 ~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~-~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~  101 (121)
T 1x4z_A           23 RPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILA-TSAIPPSRLSVEITGLEKGISYKFRVRALNMLGE  101 (121)
T ss_dssp             CCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEE-EEEECTTCCEEEEESCCTTCEEEEEEEEEETTEE
T ss_pred             CCEEEEccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEe-ecccCCCcCEEEECCCCCCCEEEEEEEEEcCCCc
Confidence            57889999999999998433334559999999998752 2 2111 0122456789999999999999999999998774

>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1

Probab=98.19  E-value=2.2e-06  Score=73.31  Aligned_cols=88  Identities=19%  Similarity=0.229  Sum_probs=61.8

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCC-cceEEEEeeecCCC-CCCCCceee--ecCCceeEeecCCcceeeeEEEEeccC
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGN-IISYTLWHRRAHEG-FPARPTCTL--FAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~-i~Gy~LWhrks~~~-y~~ept~~~--~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      ..++++.++.+ |+|-.+........ |.||.|.||..... .... ...+  ..+.+.+.|.||.|.|+|.|||.+++.
T Consensus        11 ~~~~~~~~~~~-v~l~W~~P~~~~G~pi~~Y~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n~   88 (105)
T 2haz_A           11 SIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSK-WYDAKEASMEGIVTIVGLKPETTYAVRLAALNG   88 (105)
T ss_dssp             EEEEEEECSSC-EEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEE-EEEHHHHHHHSEEEECSCCTTCEEEEEEEEEET
T ss_pred             CCCEEEEcCCc-EEEEEcCCcccCCccccEEEEEEEECCCCCCccc-eEEccccCCccEEEECCCCCCCEEEEEEEEEcC
Confidence            46778888888 98888876544444 99999999987643 2111 0112  225789999999999999999999999


Q ss_pred             CccCcce-eeEEecC
Q 004714          421 TTELGRC-EIWFSTG  434 (734)
Q Consensus       421 ~~elg~~-E~k~~T~  434 (734)
                      .|.=-.+ ...|.|.
T Consensus        89 ~G~g~~S~~~~~~T~  103 (105)
T 2haz_A           89 KGLGEISAASEFKTQ  103 (105)
T ss_dssp             TEECCCCCCEEEECC
T ss_pred             CccCCCcCCEeeEEe
Confidence            8742222 3345553

>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.17  E-value=8.6e-06  Score=72.70  Aligned_cols=91  Identities=16%  Similarity=0.131  Sum_probs=70.2

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-C-----CCCC-ceeeecCCceeEeecCCcceeeeE
Q 004714          341 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-F-----PARP-TCTLFAPNTRFVVTGLCPATEYQF  413 (734)
Q Consensus       341 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y-----~~ep-t~~~~~p~~r~~vs~L~P~TEY~f  413 (734)
                      .++...+++.++|++||+|-+.-.   ...|.+|.|=|+..... .     +.++ ...+...++.+.|+||.|.|+|.|
T Consensus         9 pp~p~~L~v~~~T~~Si~LsW~~p---~g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v~~~~t~~~l~gL~PgT~Y~~   85 (112)
T 2cui_A            9 RPRLSQLSVTDVTTSSLRLNWEAP---PGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSGTLYSL   85 (112)
T ss_dssp             CCCCCCCEEESCCSSCEEEECCCC---TTSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEETTCCEEEECSCCTTCEEEE
T ss_pred             CCCCCceEEEeecCCeEEEEECCC---CCCccEEEEEEEeCCCCccccccccCcceEEEcCCCcCEEEeCCCCCCCEEEE
Confidence            455678999999999999999854   35689999999876432 1     1112 345677889999999999999999


Q ss_pred             EEEeccCCccCcceeeEEecC
Q 004714          414 KVVSSNGTTELGRCEIWFSTG  434 (734)
Q Consensus       414 kvvsF~~~~elg~~E~k~~T~  434 (734)
                      .|.++++.++-....+...|.
T Consensus        86 ~V~A~~~~~~s~p~~~~~~T~  106 (112)
T 2cui_A           86 TLYGLRGPHKADSIQGTARTL  106 (112)
T ss_dssp             EEEEECSSSEEEEEEEEEECC
T ss_pred             EEEEEECCcccCCEEEEEEEC
Confidence            999999877666666666664

>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.17  E-value=8.1e-06  Score=70.28  Aligned_cols=88  Identities=19%  Similarity=0.283  Sum_probs=65.3

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      +..+++.+++++||+|...........|.+|.|-||.....  ..-.-+...+.+.+.|.||.|.|.|.|||.+++..|.
T Consensus        21 P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~   98 (118)
T 1x3d_A           21 PNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGN--GEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGT   98 (118)
T ss_dssp             CCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSS--SCCEEEEEESCSEEEEESCCTTCEEEEECCEEESSCB
T ss_pred             CCCcEEeccCCCEEEEEECCCCCCCCcceEEEEEEecCCCC--CCeEEeeccCCcEEEeCCCCCCCEEEEEEEEEECCCC
Confidence            34578899999999999987754456699999999876542  1112234456789999999999999999999999885


Q ss_pred             Cccee-eEEec
Q 004714          424 LGRCE-IWFST  433 (734)
Q Consensus       424 lg~~E-~k~~T  433 (734)
                      -..++ +.+.|
T Consensus        99 s~~S~~~~~~T  109 (118)
T 1x3d_A           99 SGFSEEVLYYT  109 (118)
T ss_dssp             CCCCCCEEEEC
T ss_pred             CCCccCEEEEc
Confidence            44444 33444

>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}

Probab=98.16  E-value=5.7e-06  Score=70.36  Aligned_cols=75  Identities=12%  Similarity=0.007  Sum_probs=58.7

Q ss_pred             ceEEEEE--eeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          345 NMVKFED--VRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       345 ~~~rFE~--vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      -.++++.  ++++||+|-.+........|.||.|.||.....   ... ++....+.++|.||.|.|+|.|||.+++..|
T Consensus        12 ~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~---~~~-~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G   87 (108)
T 2dm4_A           12 RNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSK---MWA-SQRAASNFTEIKNLLVNTLYTVRVAAVTSRG   87 (108)
T ss_dssp             EEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCS---CCE-EEEESSSEEEECSCCSSCEEEEEEEEEESSC
T ss_pred             cCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCC---CeE-EecCCccEEEeCCCCCCCEEEEEEEEECCCc
Confidence            3465555  689999999987764456699999999987653   111 3345678999999999999999999999877


Q ss_pred             c
Q 004714          423 E  423 (734)
Q Consensus       423 e  423 (734)
                      .
T Consensus        88 ~   88 (108)
T 2dm4_A           88 I   88 (108)
T ss_dssp             E
T ss_pred             e
Confidence            4

>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1

Probab=98.16  E-value=6.5e-06  Score=70.48  Aligned_cols=77  Identities=21%  Similarity=0.170  Sum_probs=59.4

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCC-CCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPS-PGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ..+++.+++.+||+|........ ...|.||.|.||..... +..-  .......+.+.|.||.|.|+|.|||.+++..|
T Consensus        13 ~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~--~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G   90 (111)
T 1x5y_A           13 QHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPA--NKEPVERCGFTVKDLPTGARILFRVVGVNIAG   90 (111)
T ss_dssp             EEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEES--SSSCBSSSEEEEECCCTTCCEEEEEEEEETTE
T ss_pred             CCCEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEc--cccCCcccEEEECCCCCCCEEEEEEEEEcCCc
Confidence            46889999999999999876533 34599999999886543 2110  01124578999999999999999999999877


Q ss_pred             c
Q 004714          423 E  423 (734)
Q Consensus       423 e  423 (734)
                      .
T Consensus        91 ~   91 (111)
T 1x5y_A           91 R   91 (111)
T ss_dssp             E
T ss_pred             C
Confidence            5

>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1

Probab=98.16  E-value=2.2e-06  Score=75.86  Aligned_cols=75  Identities=12%  Similarity=0.166  Sum_probs=51.9

Q ss_pred             EEEeeceeEEEEeCcCCCCCCCcceEEEEeeec-CCC-CCCCCcee---------eecCCceeEeecCCcceeeeEEEEe
Q 004714          349 FEDVRATSLTVVLGSEDPSPGNIISYTLWHRRA-HEG-FPARPTCT---------LFAPNTRFVVTGLCPATEYQFKVVS  417 (734)
Q Consensus       349 FE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks-~~~-y~~ept~~---------~~~p~~r~~vs~L~P~TEY~fkvvs  417 (734)
                      +.+|+.+||+|-..........|.||.|.||.. ... +..--..+         +....+++.|.||.|.|+|.|||++
T Consensus        11 v~~~~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~FRV~A   90 (115)
T 2ic2_A           11 VTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRILA   90 (115)
T ss_dssp             EEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEEEE
T ss_pred             eEEEeCCEEEEEEcCCCCCCCCCceEEEEEEECCCCCCceECcccccccccccccccCceeEEEeCCCCCCCEEEEEEEE
Confidence            789999999999887654345699999999987 222 22110101         1123468999999999999999999


Q ss_pred             ccCCcc
Q 004714          418 SNGTTE  423 (734)
Q Consensus       418 F~~~~e  423 (734)
                      .|..|.
T Consensus        91 ~N~~G~   96 (115)
T 2ic2_A           91 VYSNND   96 (115)
T ss_dssp             EETTSC
T ss_pred             EeCCCC
Confidence            998875

>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.15  E-value=4.6e-06  Score=71.31  Aligned_cols=76  Identities=22%  Similarity=0.237  Sum_probs=59.4

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecC-CC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAH-EG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~-~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ..+++.++++++|+|.+.........|.||.|.||... .. +.   ........+++.|.||.|.|+|.|||.+++..|
T Consensus        20 ~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~---~~~~~~~~~~~~i~~L~p~t~Y~frV~A~n~~G   96 (117)
T 1uem_A           20 SKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQ---TVANHVKTTLYTVRGLRPNTIYLFMVRAINPQG   96 (117)
T ss_dssp             CCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEE---EEEEEECSSEEEECSCCTTCEEEEEEEEEETTE
T ss_pred             CCCEEEEecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCcee---EcccccCcCEEEECCCCCCCEEEEEEEEECCCc
Confidence            36788899999999999876544456999999998764 21 21   111244788999999999999999999999876


Q ss_pred             c
Q 004714          423 E  423 (734)
Q Consensus       423 e  423 (734)
                      .
T Consensus        97 ~   97 (117)
T 1uem_A           97 L   97 (117)
T ss_dssp             E
T ss_pred             c
Confidence            4

>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.14  E-value=2.7e-06  Score=74.25  Aligned_cols=90  Identities=19%  Similarity=0.227  Sum_probs=68.3

Q ss_pred             CceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      +-.+++..++++||+|-+.....  ....|.||+|.||..... ....  .++....+.++|.||.|.|.|.|+|.+++.
T Consensus        22 P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~--~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~   99 (132)
T 1x5h_A           22 PQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTE--TLVSGTQLSQLIEGLDRGTEYNFRVAALTI   99 (132)
T ss_dssp             CEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEEEEC--CBCCTTCCEEEEECCCSSCEEEEECEEEET
T ss_pred             CeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCCCccEE--EEeCCCccEEEeCCCCCCCEEEEEEEEEcC
Confidence            34789999999999999987764  456799999999987543 1111  125567889999999999999999999999


Q ss_pred             CccCccee-eEEecCc
Q 004714          421 TTELGRCE-IWFSTGS  435 (734)
Q Consensus       421 ~~elg~~E-~k~~T~s  435 (734)
                      .|.=-.++ +.+.|..
T Consensus       100 ~G~g~~S~~~~~~T~~  115 (132)
T 1x5h_A          100 NGTGPATDWLSAETFE  115 (132)
T ss_dssp             TEEEEECCCEEEECCS
T ss_pred             CccCCCCcCEEeEcCc
Confidence            87433333 5566653

>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.13  E-value=3e-06  Score=74.49  Aligned_cols=86  Identities=13%  Similarity=0.089  Sum_probs=61.1

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecC---CC-CCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAH---EG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  418 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~---~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  418 (734)
                      ++..+++.+++++||+|-+.........|.||.|-||...   .. +..--+..+....+.+.|.||.|.|+|.|||.++
T Consensus        20 ~P~~l~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~   99 (124)
T 1wis_A           20 PPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQV   99 (124)
T ss_dssp             CCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCCTTSEECCCCEEE
T ss_pred             cCCCCEEEEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeEccCCCceEEEeCCCCCCCEEEEEEEEE
Confidence            3446889999999999999544434456999999998742   21 2110000013457899999999999999999999


Q ss_pred             cCCccCccee
Q 004714          419 NGTTELGRCE  428 (734)
Q Consensus       419 ~~~~elg~~E  428 (734)
                      +..|.-..++
T Consensus       100 N~~G~s~~S~  109 (124)
T 1wis_A          100 NIVGTSPPSQ  109 (124)
T ss_dssp             CSSCBCCCCC
T ss_pred             ECCccCCCcC
Confidence            9987644444

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A

Probab=98.12  E-value=1.3e-05  Score=75.24  Aligned_cols=87  Identities=16%  Similarity=0.194  Sum_probs=68.3

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      ++..+++..++++||+|-++...  ...|.||.|.|+..... ..  ....+....+.+.|+||.|.|+|.|+|.++++.
T Consensus       116 ~P~~l~~~~~~~~sv~l~W~~p~--~~~i~~Y~v~~~~~~~~~~~--~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~  191 (203)
T 2gee_A          116 PPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLVRYSPVKNEEDV--AELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQ  191 (203)
T ss_dssp             CCEEEEEEEEETTEEEEEEECCS--SCCCSEEEEEEEETTCGGGC--EEEEECTTCCEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CCCceEEEEcCCCEEEEEEcCCC--CCCccEEEEEEEECCCCCcc--EEEEcCCCcCEEEECCCCCCCEEEEEEEEecCC
Confidence            45678899999999999988764  34799999999986543 11  133456678999999999999999999999988


Q ss_pred             ccCcceeeEEec
Q 004714          422 TELGRCEIWFST  433 (734)
Q Consensus       422 ~elg~~E~k~~T  433 (734)
                      |+=....+...|
T Consensus       192 g~s~p~~~~~~T  203 (203)
T 2gee_A          192 HESTPLRGRQKT  203 (203)
T ss_dssp             EECCCEEEEEEC
T ss_pred             CcCCCeeeEEcC
Confidence            776666666554

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A

Probab=98.11  E-value=1.3e-05  Score=74.56  Aligned_cols=87  Identities=20%  Similarity=0.206  Sum_probs=68.8

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccCc
Q 004714          346 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELG  425 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg  425 (734)
                      .++...+++++|+|-+...+.....|.||.|.||......  .....+....+.+.|.||.|.|.|.|||.+++..|+=.
T Consensus       115 ~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~--~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~  192 (209)
T 2vkw_A          115 LEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEW--KPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSK  192 (209)
T ss_dssp             EEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCC--CCCEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECC
T ss_pred             ccccccccCCeEEEEEECcccCCCCCceEEEEEECCCCCC--ceeeecCCCccEEEecCCCCCCEEEEEEEEEeCCccCC
Confidence            4778889999999999886545678999999999832222  22334555668999999999999999999999999866


Q ss_pred             ceeeEEecC
Q 004714          426 RCEIWFSTG  434 (734)
Q Consensus       426 ~~E~k~~T~  434 (734)
                      .+|....|.
T Consensus       193 ~S~~~~~~~  201 (209)
T 2vkw_A          193 AAHFVFRTA  201 (209)
T ss_dssp             CEEEEEECC
T ss_pred             cchhhhhhh
Confidence            777777664

>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A

Probab=98.09  E-value=1.7e-05  Score=75.28  Aligned_cols=81  Identities=15%  Similarity=0.164  Sum_probs=61.8

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ++..+++++++++|++|-++...   ..|.||+|.|+..... .......+....+.+.|+||.|.|+|.|+|.+++..|
T Consensus       106 ~P~~l~v~~~t~~si~l~W~~p~---~~i~~Y~v~y~~~~~~-~~~~~~~v~~~~t~~~l~gL~p~t~Y~~~V~A~~~~G  181 (195)
T 2qbw_A          106 VPTNLEVVAATPTSLLISWDASY---YGVSYYRITYGETGGN-SPVQEFTVPYSSSTATISGLKPGVDYTITVYAYSDYY  181 (195)
T ss_dssp             SSCCCEEEEEETTEEEEECCCCC---SSCSEEEEEEEETTCC-SCCEEEEEETTCSEEEECSCCTTCEEEEEEEEESSTT
T ss_pred             CCcccEEEeCCCCEEEEEEeCCC---CCccEEEEEEEECCCC-CcceEEEeCCCCCEEEeCCCCCCCEEEEEEEEEeCCc
Confidence            33478899999999999986543   5699999988776432 1122334566679999999999999999999999887


Q ss_pred             cCcce
Q 004714          423 ELGRC  427 (734)
Q Consensus       423 elg~~  427 (734)
                      .=-.+
T Consensus       182 ~g~~S  186 (195)
T 2qbw_A          182 GSHHY  186 (195)
T ss_dssp             SSCBC
T ss_pred             cCCCC
Confidence            64333

>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1

Probab=98.09  E-value=1.3e-05  Score=69.48  Aligned_cols=82  Identities=22%  Similarity=0.253  Sum_probs=58.2

Q ss_pred             ceEEEEEeeceeEEEEe--CcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          345 NMVKFEDVRATSLTVVL--GSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL--~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ..+++++++++||+|-.  ......... .||.|.||.....    -...+.  ...+.|.||.|.|.|.|+|.+++..|
T Consensus        14 ~~l~~~~~~~~sv~l~W~~~~P~~~ng~-~~Y~v~y~~~~~~----~~~~~~--~~~~~i~~L~p~t~Y~f~V~A~~~~G   86 (107)
T 1x5a_A           14 LSLKLVKKEPRQLELTWAGSRPRNPGGN-LSYELHVLNQDEE----WHQMVL--EPRVLLTKLQPDTTYIVRVRTLTPLG   86 (107)
T ss_dssp             CCCCEEEEETTEEEEECCCCCSSCCSSC-CEEEEEEECSSCE----EEEEES--SSEEEEESCCSSCEEEEEEEEECSSS
T ss_pred             CceEEEecCCCEEEEEECCCCCCCCCCc-eEEEEEEEeCCCC----ceEEEe--cceEEECCCCCCCEEEEEEEEECCCc
Confidence            36889999999999999  544333233 9999999876111    122222  23399999999999999999999987


Q ss_pred             cCcce--eeEEecC
Q 004714          423 ELGRC--EIWFSTG  434 (734)
Q Consensus       423 elg~~--E~k~~T~  434 (734)
                      . |.+  .+.+.|.
T Consensus        87 ~-g~~S~~~~~~T~   99 (107)
T 1x5a_A           87 P-GPFSPDHEFRTS   99 (107)
T ss_dssp             C-CCCCCCEEEECC
T ss_pred             c-CCCCCCEEEEEC
Confidence            4 433  3455554

>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.08  E-value=1.7e-05  Score=69.20  Aligned_cols=89  Identities=17%  Similarity=0.144  Sum_probs=61.9

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCC-ceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARP-TCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ep-t~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      ..+++.+++++||+|-+.........|.||.|-||..... ...- ............|.||.|.|+|.|||.+++..|.
T Consensus        21 ~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~-~~~w~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~n~~G~   99 (127)
T 1uey_A           21 FDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHK-PGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIGK   99 (127)
T ss_dssp             EEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTC-TTCEEEEEEEESSCCEEEECCCTTCEECCEEEEEESSCB
T ss_pred             CCcEEEEccCCEEEEEEECCCCCCCCceEEEEEEEECCCC-CCccEEEeeeCCCceEEEecCCCCCEEEEEEEEEeCCcc
Confidence            3488999999999999986543456799999999876421 0100 1111222334468899999999999999999886


Q ss_pred             Ccceee--EEecC
Q 004714          424 LGRCEI--WFSTG  434 (734)
Q Consensus       424 lg~~E~--k~~T~  434 (734)
                      -..++.  .+.|.
T Consensus       100 s~~S~~~~~~~T~  112 (127)
T 1uey_A          100 SLPSEASEQYLTK  112 (127)
T ss_dssp             CCCCSCCCCEECC
T ss_pred             CCccccccceEcC
Confidence            555554  45554

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1

Probab=98.08  E-value=1.6e-05  Score=72.74  Aligned_cols=85  Identities=21%  Similarity=0.261  Sum_probs=67.4

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  424 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  424 (734)
                      ..+++.+++++||+|-+....   ..|.||.|.|+.....  ..-...+....+.+.|+||.|.|+|.|+|.++++.|+=
T Consensus        99 ~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s  173 (186)
T 1qr4_A           99 KGISFSDITENSATVSWTPPR---SRVDSYRVSYVPITGG--TPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEES  173 (186)
T ss_dssp             SCEEEESCCSSCEEEEECCCS---SCCSEEEEEEEETTCC--CCEEEEEETTCCEEEECSCCSSCEEEEEEEEEETTEEC
T ss_pred             CccEEEEeCCCEEEEEEECCC---CcccEEEEEEEeCCCC--CceEEEcCCCcCEEEEcCCCCCCEEEEEEEEEcCCCcC
Confidence            367889999999999998553   4699999999887542  12233456678999999999999999999999988876


Q ss_pred             cceeeEEecC
Q 004714          425 GRCEIWFSTG  434 (734)
Q Consensus       425 g~~E~k~~T~  434 (734)
                      ....+.+.|.
T Consensus       174 ~p~~~~~~T~  183 (186)
T 1qr4_A          174 EPISGILKTA  183 (186)
T ss_dssp             CCEEEEEEC-
T ss_pred             cCEEEEEEec
Confidence            6777777764

>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A

Probab=98.04  E-value=2.3e-05  Score=73.55  Aligned_cols=87  Identities=23%  Similarity=0.293  Sum_probs=67.6

Q ss_pred             CCcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 004714          339 SNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  418 (734)
Q Consensus       339 ~~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  418 (734)
                      ..+|++..++..+++++||+|-.....  ...|.||.|.|+........ ....+....+.+.|+||.|.|.|.|+|.++
T Consensus        21 ~~~P~P~~l~~~~~~~~sv~lsW~~p~--~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~   97 (203)
T 2gee_A           21 MEVPQPTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGIPI-FEDFVDSSVGYYTVTGLEPGIDYDISVYTV   97 (203)
T ss_dssp             SCCCCCEEEEEECCTTTCEEEEEECCS--SSSCCEEEEEEEESSSSSCC-EEEEEETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred             ccCcCCCccEEEecCCCEEEEEecCCC--CCCccEEEEEEEECCCCCCc-eeEEcCCCccEEEeCCCCCCCEEEEEEEEE
Confidence            457778899999999999999987654  34799999999977654111 122455778999999999999999999999


Q ss_pred             cCCccCccee
Q 004714          419 NGTTELGRCE  428 (734)
Q Consensus       419 ~~~~elg~~E  428 (734)
                      ++.|.-....
T Consensus        98 ~~~g~s~~~~  107 (203)
T 2gee_A           98 KNGGESTPTT  107 (203)
T ss_dssp             SSSCBCCCEE
T ss_pred             eCCCccccEe
Confidence            9876533333

>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.03  E-value=1.5e-05  Score=68.02  Aligned_cols=76  Identities=17%  Similarity=0.209  Sum_probs=58.9

Q ss_pred             eEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          346 MVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      .+++.+++.+||+|-+..... -...|.||.|-||..... +..-  .......+.+.|.||.|.|+|.|||.+++..|.
T Consensus        13 ~l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~~~w~~~--~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~   90 (110)
T 2yuw_A           13 LLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGTEDWIVA--NKDLIDKTKFTITGLPTDAKIFVRVKAVNAAGA   90 (110)
T ss_dssp             EEEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTCSSEEEC--CSSCCCSSEEEECSCCTTCEEEEEEEEEETTEE
T ss_pred             ccEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECCCccceEe--ccccCccCEEEECCCCCCCEEEEEEEEEcCCcC
Confidence            588999999999999987653 234699999999987543 2110  001236789999999999999999999999876

>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}

Probab=98.02  E-value=1.7e-05  Score=71.39  Aligned_cols=82  Identities=12%  Similarity=0.117  Sum_probs=64.8

Q ss_pred             eeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccCcceeeEE
Q 004714          352 VRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEIWF  431 (734)
Q Consensus       352 vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg~~E~k~  431 (734)
                      ++++||+|.+.....-..-|.||.+-||..... .-.....+...++.+.|.||.|.|+|.|||++.+..|.--.++..+
T Consensus        19 ~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~-~w~~~~~~~~~~~~~~l~~L~p~t~Y~frV~A~N~~G~s~pS~~~~   97 (114)
T 2kbg_A           19 SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKE-DQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTVYEF   97 (114)
T ss_dssp             CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCC-SCCEEEEEETTTCCEEECCCCTTCCEEEEEEEECTTSCEEEEEEEE
T ss_pred             cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCC-CcEEeEEcCCCcCEEEEcCCCCCCEEEEEEEEEeCCcCcCCcCCEE
Confidence            699999999975443446799999999997432 1112334677889999999999999999999999998777777777


Q ss_pred             ecC
Q 004714          432 STG  434 (734)
Q Consensus       432 ~T~  434 (734)
                      .|.
T Consensus        98 ~T~  100 (114)
T 2kbg_A           98 SMP  100 (114)
T ss_dssp             CCC
T ss_pred             EcC
Confidence            775

>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}

Probab=98.02  E-value=6.7e-06  Score=72.41  Aligned_cols=78  Identities=19%  Similarity=0.263  Sum_probs=56.6

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCC-cceEEEEeeecCCC-CCCCCc-eeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGN-IISYTLWHRRAHEG-FPARPT-CTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~-i~Gy~LWhrks~~~-y~~ept-~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      ..++++.++.+ |+|-++........ |.||.|.||..... ....-. .......+.++|+||.|.|+|.|||.+++..
T Consensus        12 ~~~~~~~~~~t-v~l~W~~P~~~~G~pI~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n~~   90 (122)
T 2e3v_A           12 SIDQVEPYSST-AQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGK   90 (122)
T ss_dssp             EEEEEEECSSC-EEEEEECCCCC--CCEEEEEEEEEETTCCSCEEEEEEHHHHHTTTEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CccEEEecCCc-EEEEECCCCcCCCCcceEEEEEEEECCCCCcccceeeeeecCccceEEeCCCCCCCEEEEEEEEEeCC
Confidence            46788888888 88888766544444 99999999987643 210000 0112467899999999999999999999998


Q ss_pred             cc
Q 004714          422 TE  423 (734)
Q Consensus       422 ~e  423 (734)
                      |.
T Consensus        91 G~   92 (122)
T 2e3v_A           91 GL   92 (122)
T ss_dssp             EE
T ss_pred             cc
Confidence            74

>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}

Probab=98.01  E-value=1.8e-05  Score=68.91  Aligned_cols=80  Identities=23%  Similarity=0.237  Sum_probs=60.5

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCC-CCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPS-PGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      -.+++.+++++||+|.+...... ...|.||.|.||..... +.   .+......+.+.|.||.|.|+|.|||.+.+..|
T Consensus        22 ~~l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~---~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G   98 (120)
T 2yux_A           22 QIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWF---TVIEHYHRTSATITELVIGNEYYFRVFSENMCG   98 (120)
T ss_dssp             SCEEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCE---EEESSCCSSCCEECCCCSSEEEEEEECCCSSSC
T ss_pred             CCCEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceE---EeeecCCcCEEEECCCCCCCEEEEEEEEeeCCc
Confidence            35889999999999999876533 35699999999986543 21   111134678999999999999999999998876


Q ss_pred             cCcce
Q 004714          423 ELGRC  427 (734)
Q Consensus       423 elg~~  427 (734)
                      .=..+
T Consensus        99 ~s~~S  103 (120)
T 2yux_A           99 LSEDA  103 (120)
T ss_dssp             SCSSC
T ss_pred             CCCCc
Confidence            53333

>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.01  E-value=1.1e-05  Score=69.36  Aligned_cols=75  Identities=19%  Similarity=0.297  Sum_probs=57.9

Q ss_pred             EEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          348 KFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       348 rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      ++.+++++||+|-+.........|.||.|.|+.....+..- ...+....+.+.|.||.|.|.|.|||.+++..|.
T Consensus        27 ~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~-~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~  101 (121)
T 1wf5_A           27 TLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWTVL-LASVDPKATSVTVKGLVPARSYQFRLCAVNDVGK  101 (121)
T ss_dssp             EECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCCCEEE-ESSCCTTCCEEEEESCCTTCEEEEEEEEEESSCE
T ss_pred             eeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCCCCceEe-EcccCCCccEEEECCcCCCCEEEEEEEEEcCCcc
Confidence            78899999999999866434457999999999875322100 0123456789999999999999999999998775

>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=98.01  E-value=2.6e-05  Score=68.81  Aligned_cols=84  Identities=12%  Similarity=0.136  Sum_probs=62.2

Q ss_pred             ceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          345 NMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ..++.+. +++||.|-++....  ....|.||+|+||.....   +. .++....+.+.+. |.|.|.|.|+|.+||..|
T Consensus        23 ~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~---~~-~~~~~~~~~~~~~-L~~~t~Y~~~V~A~n~~G   96 (117)
T 1wj3_A           23 GNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQN---NV-QVLNTNKTSAELV-LPIKEDYIIEVKATTDGG   96 (117)
T ss_dssp             CSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCS---SC-EEEEESSSEEEEE-CCCSSCEEEEEEEEESSC
T ss_pred             ccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCC---CC-eEEeCCCcEEEEE-CCCCCEEEEEEEEECCCc
Confidence            3456665 88999999988743  467899999999987653   11 2444455667777 999999999999999988


Q ss_pred             cCcce-eeEEecC
Q 004714          423 ELGRC-EIWFSTG  434 (734)
Q Consensus       423 elg~~-E~k~~T~  434 (734)
                      +=-.+ .+.+.|.
T Consensus        97 ~Gp~S~~v~~~T~  109 (117)
T 1wj3_A           97 DGTSSEQIRIPRI  109 (117)
T ss_dssp             CCCBCCCEEECCC
T ss_pred             cCCCCCCEEEEcC
Confidence            64344 5666665

>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A

Probab=98.00  E-value=1.1e-05  Score=70.92  Aligned_cols=83  Identities=18%  Similarity=0.170  Sum_probs=66.5

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCC-ceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 004714          346 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARP-TCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  424 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ep-t~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  424 (734)
                      .+++.+|+++|+.|-+....   ..|.||+|-|+.+...  .+| ...+...++.+.|+||.|+|+|.+.|.++.+.++-
T Consensus        11 ~l~vt~vt~~S~~lsW~~p~---~~v~~Y~I~y~~~~g~--~~~~~~~v~g~~~s~~l~~L~PgT~Y~V~v~a~~~~~~S   85 (95)
T 2h41_A           11 SESVTEITASSFVVSWVSAS---DTVSGFRVEYELSEEG--DEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQ   85 (95)
T ss_dssp             TTSCCCCGGGCEEEECCCSC---TTEEEEEEEEEETTTC--CCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCE
T ss_pred             EEEEEEeCCCeEEEEECCCC---CCccEEEEEEEeCCCC--CcceEEECCCCccEEEECCCCCCCEEEEEEEEEcCCCcc
Confidence            46778999999999887653   6799999999887653  233 35678889999999999999999999999987776


Q ss_pred             cceeeEEec
Q 004714          425 GRCEIWFST  433 (734)
Q Consensus       425 g~~E~k~~T  433 (734)
                      +...+...|
T Consensus        86 ~p~s~~~~T   94 (95)
T 2h41_A           86 SLILSTSQT   94 (95)
T ss_dssp             EEEEEEEEE
T ss_pred             cCEEEEEEC
Confidence            665555444

>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.00  E-value=5.1e-05  Score=67.51  Aligned_cols=86  Identities=20%  Similarity=0.137  Sum_probs=61.2

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecC------CCCCC--CCceeeecCCceeEeecCCcceeeeEEEEe
Q 004714          346 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAH------EGFPA--RPTCTLFAPNTRFVVTGLCPATEYQFKVVS  417 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~------~~y~~--ept~~~~~p~~r~~vs~L~P~TEY~fkvvs  417 (734)
                      .++..+++.+||+|.+.....  ++|.+|.|-|+.-.      +.+..  .-..+-..+.+++.|.||.|.|+|.|||.+
T Consensus        22 ~~~~~~~~~~sv~L~W~~p~~--~g~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~gL~p~t~Y~frV~A   99 (127)
T 2dmk_A           22 REELCTASHDTITVHWISDDE--FSISSYELQYTIFTGQANFISLYNSVDSWMIVPNIKQNHYTVHGLQSGTRYIFIVKA   99 (127)
T ss_dssp             EEEEEEEETTEEEEEEECSCC--SSEEEEEEEEEEESCCSCHHHHHHTGGGSEEEEEECSSEEEEESCCSSCEEEEEEEE
T ss_pred             CCEEEeeeCCEEEEEECCCCC--CCccceEEEEEEecccccccccccCCCCcEEeecccCCeEEECCCCCCCEEEEEEEE
Confidence            478899999999999987653  33888888887511      00100  111111246889999999999999999999


Q ss_pred             ccCCccCcce-eeEEecC
Q 004714          418 SNGTTELGRC-EIWFSTG  434 (734)
Q Consensus       418 F~~~~elg~~-E~k~~T~  434 (734)
                      .+..|. +.+ ++.+.|.
T Consensus       100 ~N~~G~-~~S~~v~~~T~  116 (127)
T 2dmk_A          100 INQAGS-RNSEPTRLKTN  116 (127)
T ss_dssp             EESSCE-EECCCEEEECC
T ss_pred             EeCCCC-CCCcCeEeEeC
Confidence            999998 533 5566665

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}

Probab=97.99  E-value=2e-05  Score=73.14  Aligned_cols=86  Identities=19%  Similarity=0.212  Sum_probs=65.4

Q ss_pred             ceEEEEEee--ceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCC-ceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          345 NMVKFEDVR--ATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARP-TCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       345 ~~~rFE~vt--~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ep-t~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      -.+++.+|+  ++||+|-....  ....|.||.|.||.....  .+. ...+....+.+.|.||.|.|+|.|+|.+++..
T Consensus         4 ~~l~v~~v~~~~~si~l~W~~p--~~~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~~   79 (201)
T 2ha1_A            4 VEVFITETPSQPNSHPIQWNAP--QPSHISKYILRWRPKNSV--GRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQY   79 (201)
T ss_dssp             CEEECCSCSCCSSCEEEEEECC--SSTTCCEEEEEEEETTCS--SCCEEEEECTTCCEEEECSCCTTEEEEEEEEEECTT
T ss_pred             eeEEEEecCCCCCEEEEEEeCC--CCCCceEEEEEEEECCCC--CceEEEecCCCccEEEecCCCCCCEEEEEEEEEecc
Confidence            467888888  99999998865  345899999988865432  112 22345568899999999999999999999988


Q ss_pred             ccCcceeeEEecC
Q 004714          422 TELGRCEIWFSTG  434 (734)
Q Consensus       422 ~elg~~E~k~~T~  434 (734)
                      |.-......+.|.
T Consensus        80 G~~~~~~~~~~t~   92 (201)
T 2ha1_A           80 GHQEVTRFDFTTT   92 (201)
T ss_dssp             SCEEEEEEEEEEC
T ss_pred             cccCceeEEEecC
Confidence            7655556666664

>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=97.98  E-value=2.2e-05  Score=67.04  Aligned_cols=85  Identities=15%  Similarity=0.163  Sum_probs=61.5

Q ss_pred             eEEE-EEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          346 MVKF-EDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       346 ~~rF-E~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      .+++ +.++++||+|-.+.... ....|.||.|.||.....   +-.-+.....+.+.|.||.|.|.|.|||.+++..|.
T Consensus        14 ~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~   90 (110)
T 2crz_A           14 PPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKD---EPREVYQGSEVECTVSSLLPGKTYSFRLRAANKMGF   90 (110)
T ss_dssp             CCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSC---CCEEEEEESCSEEEEESCCTTCEEEECCEEECSSCB
T ss_pred             CceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCC---ceEEEEeCCcEEEEECCcCCCCEEEEEEEEEcCCcc
Confidence            3455 67899999999975543 346699999999976443   222233557889999999999999999999999886


Q ss_pred             Cccee-eEEec
Q 004714          424 LGRCE-IWFST  433 (734)
Q Consensus       424 lg~~E-~k~~T  433 (734)
                      =..++ +.+.|
T Consensus        91 g~~S~~~~~~T  101 (110)
T 2crz_A           91 GPFSEKCDITT  101 (110)
T ss_dssp             CCCCCCEEEEC
T ss_pred             CCCCCcccccc
Confidence            33333 34444

>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=97.98  E-value=6.1e-05  Score=65.11  Aligned_cols=72  Identities=11%  Similarity=0.188  Sum_probs=55.9

Q ss_pred             EEeeceeEEEEeCcCCCC-CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          350 EDVRATSLTVVLGSEDPS-PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       350 E~vt~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      .+++++||+|-+...... ...|.||.|.+|.....  .+-.-+...+.+.+.|.+|.|.|.|.|||.+++..|.
T Consensus        28 ~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~  100 (120)
T 2crm_A           28 GKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNG--NKWEMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQ  100 (120)
T ss_dssp             EEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSS--CCCEEEECSSCSEEEECSCCTTSCEEEEEEEEETTEE
T ss_pred             eccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCC--cCCEEEEeccccEEEECCCCCCCEEEEEEEEEcCCcc
Confidence            489999999998876533 45699999999987541  1112233456889999999999999999999998774

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A

Probab=97.97  E-value=3.6e-05  Score=76.93  Aligned_cols=91  Identities=12%  Similarity=0.096  Sum_probs=68.2

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          342 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       342 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      |.+..+....+++++|+|-+.........|.||.|+||..... +..  ...+....+.+.|.+|.|.|.|.|||.+++.
T Consensus       294 p~~p~~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~--~~~~~~~~~~~~i~~L~~~t~Y~~~V~A~n~  371 (389)
T 2jll_A          294 PSPPSIHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWL--EKKVQGNKDHIILEHLQWTMGYEVQITAANR  371 (389)
T ss_dssp             CCCCCEEEEEETTTEEEEEECCCCCCSSCCCEEEEEEEC-----CCB--CCEECTTCCEEEECSCCTTCEEEEEEEEEC-
T ss_pred             CCCCccccccCcCCEEEEEEECCCCCCCcccEEEEEEEeCCCCccee--EeeccCCcceEEeCCcCCCCEEEEEEEEEcC
Confidence            4444677788999999999986544456799999999986543 322  2245667788999999999999999999999


Q ss_pred             CccCcceeeEEecC
Q 004714          421 TTELGRCEIWFSTG  434 (734)
Q Consensus       421 ~~elg~~E~k~~T~  434 (734)
                      .|.=..++..+.|.
T Consensus       372 ~G~s~~s~~~~~T~  385 (389)
T 2jll_A          372 LGYSEPTVYEFSMP  385 (389)
T ss_dssp             CCBCCCEEEEEECC
T ss_pred             CcCCCceeeEecCC
Confidence            99766778877775

>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.97  E-value=2e-05  Score=68.33  Aligned_cols=70  Identities=20%  Similarity=0.093  Sum_probs=54.5

Q ss_pred             EeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          351 DVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       351 ~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      .++++||+|-+.........|.||.|-||.....   +-.-+.....+.+.|.||.|.|.|.|||.+++..|.
T Consensus        21 ~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~   90 (110)
T 2db8_A           21 CTHNNSATLSWKQPPLSTVPADGYILELDDGNGG---QFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGV   90 (110)
T ss_dssp             SCSSSEEEECCBCCTTCCSCCSEEEEEECCSSSS---CCEEEEEESCSCEEEECCCSSSCCEEEEEEECSSCB
T ss_pred             ccCCCEEEEEECCCCCCCCCccEEEEEEEeCCCC---ceEEEEeCCcCEEEECCCCCCCEEEEEEEEEeCCcC
Confidence            4678999998887764446799999999876433   112233347889999999999999999999999873

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A

Probab=97.92  E-value=4.2e-05  Score=71.29  Aligned_cols=92  Identities=16%  Similarity=0.194  Sum_probs=67.1

Q ss_pred             cCceEEEEEe--eceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 004714          343 VPNMVKFEDV--RATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  419 (734)
Q Consensus       343 ~~~~~rFE~v--t~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  419 (734)
                      ++..+++..+  ++++|+|...........|.||.|.|+..... ...--...+....+.+.|.||.|.|.|.|+|.+++
T Consensus       108 ~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n  187 (211)
T 3p4l_A          108 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARN  187 (211)
T ss_dssp             CCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGGSEEEEEESSCSEEEECCCCTTCEEEEEEEEEE
T ss_pred             CCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCceEEEEecCCeeEEEEcCCCCCCEEEEEEEEEc
Confidence            3446788877  68999999987654456799999999977554 21112234667788999999999999999999999


Q ss_pred             CCccCccee-eEEecC
Q 004714          420 GTTELGRCE-IWFSTG  434 (734)
Q Consensus       420 ~~~elg~~E-~k~~T~  434 (734)
                      ..|+=-.++ +.+.|.
T Consensus       188 ~~G~g~~S~~v~~~~~  203 (211)
T 3p4l_A          188 SKGMGPMSEAVQFRTP  203 (211)
T ss_dssp             TTEECCCCCCEEEECC
T ss_pred             CCccCCCCCCEEccCc
Confidence            988533333 444443

>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1

Probab=97.92  E-value=4.7e-05  Score=69.59  Aligned_cols=86  Identities=21%  Similarity=0.224  Sum_probs=64.7

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ++..+++.+++++||+|-.+...   +.|.||.|.|+.....   .....+....+.+.|.||.|.|+|.|+|.++++.+
T Consensus         9 ~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~~   82 (186)
T 1qr4_A            9 NPKDLEVSDPTETTLSLRWRRPV---AKFDRYRLTYVSPSGK---KNEMEIPVDSTSFILRGLDAGTEYTISLVAEKGRH   82 (186)
T ss_dssp             CCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECTTCC---EEEEEECTTCSEEEEESCCSSCEEEEEEEEESSSC
T ss_pred             CCCceEEEecCCCEEEEEEeCCC---CCccEEEEEEEeCCCC---eeEEECCCCCCEEEECCCCCCCEEEEEEEEEcCCc
Confidence            44578899999999999987653   4789999999854321   11223445678999999999999999999999766


Q ss_pred             cCcceeeEEecC
Q 004714          423 ELGRCEIWFSTG  434 (734)
Q Consensus       423 elg~~E~k~~T~  434 (734)
                      .-....+.+.|.
T Consensus        83 ~s~~~~~~~~t~   94 (186)
T 1qr4_A           83 KSKPTTIKGSTV   94 (186)
T ss_dssp             BCCCEEEEEECC
T ss_pred             cCCCEEEEEECC
Confidence            555556666663

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A

Probab=97.89  E-value=2.1e-05  Score=73.10  Aligned_cols=89  Identities=18%  Similarity=0.181  Sum_probs=65.0

Q ss_pred             cCceEEEEEeeceeEEEEeCcCC-CCCCCcceEEEEeeecCCCCCCCCceeeec--CCceeEeecCCcceeeeEEEEecc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSED-PSPGNIISYTLWHRRAHEGFPARPTCTLFA--PNTRFVVTGLCPATEYQFKVVSSN  419 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~-~s~~~i~Gy~LWhrks~~~y~~ept~~~~~--p~~r~~vs~L~P~TEY~fkvvsF~  419 (734)
                      ++..+++..++++||+|-..... .....|.||.|.||.....  .+...+...  ..+.+.|+||.|.|.|.|||.+++
T Consensus       118 ~P~~~~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n  195 (214)
T 2ibg_A          118 VPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSA--GEYFKATIEGAHARSFKIAPLETATMYEFKLQSFS  195 (214)
T ss_dssp             CCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCC--SCCEEEEEECTTCCEEEECSCCTTCEEEEEEEEEC
T ss_pred             CCcccEEEEccCCeEEEEEeCCCccCCCCcceEEEEEEECCCC--cceEEeeccCCcceEEEeCCCCCCCEEEEEEEEEc
Confidence            44567888999999999998775 3457799999999987652  122222222  368999999999999999999999


Q ss_pred             CCccCcce-eeEEec
Q 004714          420 GTTELGRC-EIWFST  433 (734)
Q Consensus       420 ~~~elg~~-E~k~~T  433 (734)
                      ..|.=..+ .+.+.|
T Consensus       196 ~~G~g~~S~~~~~~T  210 (214)
T 2ibg_A          196 AASASEFSALKQGRT  210 (214)
T ss_dssp             SSCBCCCCCCEEEEC
T ss_pred             CCccCCCcceEeeEe
Confidence            98753223 344444

>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A

Probab=97.88  E-value=7.4e-05  Score=69.62  Aligned_cols=90  Identities=19%  Similarity=0.197  Sum_probs=65.8

Q ss_pred             cCceEEEEEeeceeEEEEeCcCC-C---CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 004714          343 VPNMVKFEDVRATSLTVVLGSED-P---SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  418 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~-~---s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  418 (734)
                      ++-.+++..++++||+|-..... +   ....|.||.|.||.....  ..-..++....+.+.|+||.|.|+|.|+|.++
T Consensus         7 ~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~   84 (211)
T 3p4l_A            7 PPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPA--NTKYKNANATTLSYLVTGLKPNTLYEFSVMVT   84 (211)
T ss_dssp             CCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC-----CCCEEEEESSSEEEECSCCTTCEEEEEEEEE
T ss_pred             CCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCC--cceEEEeCCCceEEEecCcCCCCEEEEEEEEE
Confidence            44578899999999999998753 1   246799999999986543  11223456678899999999999999999999


Q ss_pred             cCCccCccee-eEEecC
Q 004714          419 NGTTELGRCE-IWFSTG  434 (734)
Q Consensus       419 ~~~~elg~~E-~k~~T~  434 (734)
                      +..|.-..++ +.+.|.
T Consensus        85 n~~g~~~~S~~~~~~t~  101 (211)
T 3p4l_A           85 KGRRSSTWSMTAHGTTF  101 (211)
T ss_dssp             ETTEECCCCCCEEEECC
T ss_pred             cCCCCCccceeEeeecc
Confidence            9877433232 455554

>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=97.88  E-value=1.2e-05  Score=71.59  Aligned_cols=79  Identities=18%  Similarity=0.273  Sum_probs=58.0

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ++..+++.+ +.+||+|-..-.......|+||.|-||+...... .-.-.+....+++.|.||.|.|+|.|||++++..|
T Consensus        10 pP~~l~v~~-~~~sv~L~W~pP~~~~~~I~gY~vey~~~~~~W~-~~~~~~~~~~t~~~v~~L~pg~~Y~FRV~A~n~~G   87 (108)
T 1v5j_A           10 PPRGLVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWE-VLDPAVAGTETELLVPGLIKDVLYEFRLVAFAGSF   87 (108)
T ss_dssp             CCEEEEEEE-CSSSEEEEEECCSCCSSCCCBEEEEEEETTCCCE-EEEEEECSSCCEEECCCCCTTSCEECCBEEEETTE
T ss_pred             CCcceEEEE-eCCEEEEEECCCCCCCCCCcEEEEEEEeCCCCcE-EeeeecCCCcCEEEeCCCCCCCEEEEEEEEEcCCC
Confidence            444567765 5788888887765445669999999998433221 11113556789999999999999999999999876


Q ss_pred             c
Q 004714          423 E  423 (734)
Q Consensus       423 e  423 (734)
                      .
T Consensus        88 ~   88 (108)
T 1v5j_A           88 V   88 (108)
T ss_dssp             E
T ss_pred             C
Confidence            5

>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A

Probab=97.85  E-value=2.8e-05  Score=76.80  Aligned_cols=88  Identities=17%  Similarity=0.174  Sum_probs=61.3

Q ss_pred             eEEEEEe--eceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          346 MVKFEDV--RATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       346 ~~rFE~v--t~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      .++++.+  ++++|+|-..........|.||.|.||..... +..-..-......+.+.|.+|.|.|+|.|||.+++..|
T Consensus       205 ~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~~~~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G  284 (303)
T 1i1r_A          205 NLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDG  284 (303)
T ss_dssp             EEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGGGGCSCCSEEEECSCCTTCEEEEEEEEEETTS
T ss_pred             ceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEccccCCCceeEEEeCCCCCCCEEEEEEEeccCCC
Confidence            4566655  78999999887654345699999999988643 32111000134678999999999999999999999765


Q ss_pred             --cCcce--eeEEec
Q 004714          423 --ELGRC--EIWFST  433 (734)
Q Consensus       423 --elg~~--E~k~~T  433 (734)
                        .++.|  ++.+.|
T Consensus       285 ~G~~S~wS~~~~~~T  299 (303)
T 1i1r_A          285 KGYWSDWSEEASGIT  299 (303)
T ss_dssp             CSCCCCCCCCEEEEC
T ss_pred             CCCcCCCCCccceeC
Confidence              33332  445555

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A

Probab=97.84  E-value=7.8e-05  Score=72.65  Aligned_cols=91  Identities=21%  Similarity=0.212  Sum_probs=70.7

Q ss_pred             CcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 004714          340 NVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  419 (734)
Q Consensus       340 ~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  419 (734)
                      ..+++..+++.+++++||+|-.+..+   ..|.||.|.||.....- ..-...+....+.+.|+||.|.|+|.|+|.+++
T Consensus        20 ~p~~P~~l~~~~~~~~sv~l~W~~p~---~~~~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~   95 (290)
T 3r8q_A           20 AIPAPTDLKFTQVTPTSLSAQWTPPN---VQLTGYRVRVTPKEKTG-PMKEINLAPDSSSVVVSGLMVATKYEVSVYALK   95 (290)
T ss_dssp             CCCCCEEEEEEEECSSCEEEEEECCS---SCCCEEEEEEEESSSSS-CCEEEEECTTCCEEEECSCCSSCEEEEEEEEEE
T ss_pred             CCCCCCceEEEECCCCEEEEEEeCCC---CCeeEEEEEEEeCCCCC-ceEEEEcCCCccEEEeCCCCCCCEEEEEEEEEe
Confidence            34566789999999999999998763   47999999999876431 111223455688999999999999999999999


Q ss_pred             CCccCcceeeEEecC
Q 004714          420 GTTELGRCEIWFSTG  434 (734)
Q Consensus       420 ~~~elg~~E~k~~T~  434 (734)
                      +.|.-..++..+.|.
T Consensus        96 ~~g~s~~s~~~~~t~  110 (290)
T 3r8q_A           96 DTLTSRPAQGVVTTL  110 (290)
T ss_dssp             TTEECCCEEEEEECC
T ss_pred             CCCCCCCcceeEecC
Confidence            888766666666664

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A

Probab=97.83  E-value=6.3e-05  Score=71.77  Aligned_cols=88  Identities=14%  Similarity=0.088  Sum_probs=66.8

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          342 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       342 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      .++-.+++..++++||+|-.+..   ...|.||.|.||.....  ......+....+.+.|+||.|.|+|.|+|.+++..
T Consensus         7 ~~P~~l~~~~~~~~si~l~W~~p---~g~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~   81 (234)
T 3f7q_A            7 GAPQNPNAKAAGSRKIHFNWLPP---SGKPMGYRVKYWIQGDS--ESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQ   81 (234)
T ss_dssp             CCCEEEEEEECSSSCEEEEEECC---SSCCCEEEEEEEETTSC--GGGCEEEEESSSEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CCCcceEEEEcCCCEEEEEEECC---CCccceEEEEEEECCCC--ccceEEEcCCccEEEECCCCCCCEEEEEEEEEeCC
Confidence            45567899999999999998875   35799999999987543  11233556788999999999999999999999987


Q ss_pred             ccCcce-eeEEecC
Q 004714          422 TELGRC-EIWFSTG  434 (734)
Q Consensus       422 ~elg~~-E~k~~T~  434 (734)
                      |.=-.+ .+.+.|.
T Consensus        82 G~g~~s~~~~~~T~   95 (234)
T 3f7q_A           82 GEGPYSSLVSCRTH   95 (234)
T ss_dssp             EECCCCCCEEEECC
T ss_pred             CcCCCCCeEEEEcC
Confidence            632223 3445453

>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1

Probab=97.82  E-value=8.7e-05  Score=61.40  Aligned_cols=71  Identities=14%  Similarity=0.260  Sum_probs=55.4

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  424 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  424 (734)
                      ..++...++++||+|-++.... ..+|.||.|. |..        ..+...+.+.+.+++|.|.|.|.|||.+++..|.-
T Consensus         8 ~~l~~~~~~~~sv~L~W~~~~~-~~~i~~Y~v~-~~~--------~~~~~~~~~~~~~~~L~~~t~Y~~~V~A~n~~G~~   77 (88)
T 1k85_A            8 TNLASTAQTTSSITLSWTASTD-NVGVTGYDVY-NGT--------ALATTVTGTTATISGLAADTSYTFTVKAKDAAGNV   77 (88)
T ss_dssp             EEEEEEEECSSCEEEEEECCSC-CSSEEEEEEE-ESS--------SEEEEESSSEEEECCCCSSCEEEEEEEEEETTTEE
T ss_pred             CccEEEeccCCEEEEEECCCCC-CCCccEEEEE-ECC--------EEEeecCCCEEEeCCCCCCCEEEEEEEEEeCCCCc
Confidence            4688899999999999976542 2359999997 421        12334467899999999999999999999988764


Q ss_pred             c
Q 004714          425 G  425 (734)
Q Consensus       425 g  425 (734)
                      |
T Consensus        78 s   78 (88)
T 1k85_A           78 S   78 (88)
T ss_dssp             C
T ss_pred             C
Confidence            4

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1

Probab=97.82  E-value=6.2e-05  Score=69.80  Aligned_cols=88  Identities=17%  Similarity=0.246  Sum_probs=62.8

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC--CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG--FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~--y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      +..+++.+ +++||+|-..........|.||.|.||.....  +.. -...+....+.+.+ ||.|.|+|.|||.+++..
T Consensus         9 P~~~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~-~~~~~~~~~~~~~~-~L~p~t~Y~~~V~A~n~~   85 (205)
T 1cfb_A            9 PKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDA-AYEKVPNTDSSFVV-QMSPWANYTFRVIAFNKI   85 (205)
T ss_dssp             CEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEE-EEEEEETTCSEEEE-ECCSSEEEEEEEEEEETT
T ss_pred             CCCcEEEe-cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCcee-eeeccCCCceEEEE-eCCCCCEEEEEEEEEECC
Confidence            34688888 99999999986643456799999999876432  211 11233445667776 999999999999999998


Q ss_pred             ccCccee--eEEecC
Q 004714          422 TELGRCE--IWFSTG  434 (734)
Q Consensus       422 ~elg~~E--~k~~T~  434 (734)
                      |.-..++  ..+.|.
T Consensus        86 G~~~~s~~~~~~~T~  100 (205)
T 1cfb_A           86 GASPPSAHSDSCTTQ  100 (205)
T ss_dssp             EECCCCCCCCCEEEC
T ss_pred             ccCCCCCCceeEEcC
Confidence            7654442  555554

>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A

Probab=97.81  E-value=0.0001  Score=70.32  Aligned_cols=84  Identities=18%  Similarity=0.254  Sum_probs=62.6

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCce-e-e-ecCCceeEeecCCcceeeeEEEEeccC
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTC-T-L-FAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~-~-~-~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      ..+++..+++++|+|.+.........|.||.|.|+..... ....+.. + + ....+.+.|.||.|.|.|.|+|.+++.
T Consensus       103 ~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~  182 (234)
T 3f7q_A          103 GRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNG  182 (234)
T ss_dssp             CCCEEEECSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBSSCCEECCCSCTTCCEEEEECCCTTCCEEEEEEEEET
T ss_pred             CccEEEEecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCccCcceEEEecCCcceEEEeCCCCCCCeEEEEEEEECC
Confidence            4588899999999999987654456799999999986554 2111111 1 1 233578999999999999999999999


Q ss_pred             CccCccee
Q 004714          421 TTELGRCE  428 (734)
Q Consensus       421 ~~elg~~E  428 (734)
                      .|.=-.++
T Consensus       183 ~G~g~~S~  190 (234)
T 3f7q_A          183 AGWGPERE  190 (234)
T ss_dssp             TEECCCEE
T ss_pred             CccCCCcC
Confidence            88633444

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}

Probab=97.81  E-value=0.00011  Score=66.34  Aligned_cols=77  Identities=19%  Similarity=0.283  Sum_probs=61.9

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCC-CCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSP-GNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~-~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      +..+++..+++++|+|-........ ..|.||.|.|+.....   +-..+.....+.+.|.+|.|.|.|.|+|.+++..|
T Consensus       106 p~~~~~~~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G  182 (197)
T 3lpw_A          106 PGKITLMDVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSD---KWATCATVKVTEATITGLIQGEEYSFRVSAQNEKG  182 (197)
T ss_dssp             CSCEEEEEECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCS---CCEEEEEESSSEEEECCCCTTCEEEEEEEEEETTE
T ss_pred             CcccEEEeccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCC---ceEEeecccccEEEeCCcCCCCEEEEEEEEEeCCc
Confidence            3468889999999999998865433 4799999999987543   22334556789999999999999999999999877


Q ss_pred             c
Q 004714          423 E  423 (734)
Q Consensus       423 e  423 (734)
                      .
T Consensus       183 ~  183 (197)
T 3lpw_A          183 I  183 (197)
T ss_dssp             E
T ss_pred             c
Confidence            4

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A

Probab=97.80  E-value=3.3e-05  Score=74.84  Aligned_cols=75  Identities=15%  Similarity=0.212  Sum_probs=61.7

Q ss_pred             ceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          345 NMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ..+++..++++||+|-.....+  ....|.||+|.|+.....   .-...+....+.+.|.||.|.|+|.|+|.+++..|
T Consensus       201 p~~~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G  277 (290)
T 3l5i_A          201 PTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGN---ETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG  277 (290)
T ss_dssp             CCEEEEEECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSC---CEEEEEETTCSEEEECSCCTTCEEEEEEEEEETTE
T ss_pred             CeeeEeeccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCC---eEEEEeCCCceEEEeCCCCCCCEEEEEEEEEeCCC
Confidence            3678899999999999985432  356799999999987553   22345677888999999999999999999999998

>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}

Probab=97.80  E-value=3.4e-05  Score=71.57  Aligned_cols=76  Identities=17%  Similarity=0.177  Sum_probs=58.6

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccCc
Q 004714          346 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELG  425 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg  425 (734)
                      .+++.+++++||+|-....   ...|.||.|.|+.....- ..-...+....+.+.|.||.|.|+|.|+|.++++.|+=.
T Consensus       117 ~l~~~~~~~~sv~l~W~~p---~~~i~~Y~v~~~~~~~~~-~~~~~~v~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~~~  192 (201)
T 2ha1_A          117 SESVTEITASSFVVSWVSA---SDTVSGFRVEYELSEEGD-EPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQS  192 (201)
T ss_dssp             CSSCCCCCSCCEEEECCCS---CTTEEEEEEEEEETTTCC-CCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCEE
T ss_pred             ceEEEecCCCeEEEEEeCC---CCCccEEEEEEEECCCCC-ceeEEEcCCceeEEEeCCCCCCCEEEEEEEEEcCCCCcc
Confidence            3577889999999998765   347999999999754321 111234566678999999999999999999999987533

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1

Probab=97.78  E-value=9.2e-05  Score=71.48  Aligned_cols=85  Identities=18%  Similarity=0.222  Sum_probs=66.9

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ++..+++..+++++|+|-++..   ...|.||.|.|+.....   .....+....+.+.|.||.|.|.|.|+|.++++.|
T Consensus       199 ~P~~l~~~~~~~~sv~l~W~~p---~~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g  272 (283)
T 1tdq_A          199 SPRDLMVTASSETSISLIWTKA---SGPIDHYRITFTPSSGI---SSEVTVPRDRTSYTLTDLEPGAEYIISITAERGRQ  272 (283)
T ss_dssp             CCEEEEEEEECSSCEEEEEECC---CSCCSEEEEEEECSSSC---CEEEEEESSCSEEEECCCCTTCCEEEEEEEEETTE
T ss_pred             CCCccEEeEecCCEEEEEEeCC---CCcccEEEEEEEcCCCC---eeEEEeCCCccEEEECCCCCCCEEEEEEEEEcCCC
Confidence            4567899999999999999764   35699999999987542   12334567788999999999999999999999888


Q ss_pred             cCcceeeEEec
Q 004714          423 ELGRCEIWFST  433 (734)
Q Consensus       423 elg~~E~k~~T  433 (734)
                      +=..+.++.+|
T Consensus       273 ~s~~~~~~a~T  283 (283)
T 1tdq_A          273 QSLESTVDAFT  283 (283)
T ss_dssp             ECCCEEEEEC-
T ss_pred             CCcceeeEecC
Confidence            76666665554

>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}

Probab=97.78  E-value=5.7e-05  Score=76.81  Aligned_cols=83  Identities=16%  Similarity=0.194  Sum_probs=67.4

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          342 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       342 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      .++.-++-.+||++||++-++.... ..+|.||+|.+--..       ...+....+.|.+.||.|-|||.|||+++...
T Consensus       152 ~Pp~NL~At~VT~tSVtLsW~aP~~-~~GI~gY~ly~~g~~-------v~~v~~~~tsyt~~gLk~~TeYsF~V~A~d~~  223 (238)
T 2w1n_A          152 NPVRDFKASEINKKNVTVTWTEPET-TEGLEGYILYKDGKK-------VAEIGKDETSYTFKKLNRHTIYNFKIAAKYSN  223 (238)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECCSC-CTTEEEEEEEETTEE-------EEEEETTCCEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CCCCceEEEEccCCeEEEEecCCCC-CCCceeEEEEeCCce-------eEEeeccceEEEecCCCCCCEEEEEEEEEeCC
Confidence            4667899999999999999887643 234999999886532       23578888999999999999999999999999


Q ss_pred             ccCcceeeEEe
Q 004714          422 TELGRCEIWFS  432 (734)
Q Consensus       422 ~elg~~E~k~~  432 (734)
                      |.....|.-..
T Consensus       224 G~~Ss~e~vtV  234 (238)
T 2w1n_A          224 GEVSSKESLTL  234 (238)
T ss_dssp             SCBCCCEEEEE
T ss_pred             CCccccCcEEE
Confidence            98776665443

>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A

Probab=97.78  E-value=4.6e-05  Score=70.75  Aligned_cols=86  Identities=12%  Similarity=0.151  Sum_probs=61.6

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCC-C-CCC-CCcee--------eecCCceeEeecCCcceee
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHE-G-FPA-RPTCT--------LFAPNTRFVVTGLCPATEY  411 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~-~-y~~-ept~~--------~~~p~~r~~vs~L~P~TEY  411 (734)
                      ++..+++.+++++||+|-.+........|.||.|.||.... . +.. .....        .....+.+.|++|.|.|.|
T Consensus         4 pP~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y   83 (214)
T 2ibg_A            4 PPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTY   83 (214)
T ss_dssp             CCCCCEEEEEETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTTCEE
T ss_pred             CCCCCEeeEecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCCCEE
Confidence            34456678899999999998776544679999999998643 1 211 11100        1135678899999999999


Q ss_pred             eEEEEeccCCccCccee
Q 004714          412 QFKVVSSNGTTELGRCE  428 (734)
Q Consensus       412 ~fkvvsF~~~~elg~~E  428 (734)
                      .|||.+++..|.-+.++
T Consensus        84 ~~~V~A~n~~g~~~~s~  100 (214)
T 2ibg_A           84 RFRILAVYSNNDNKESN  100 (214)
T ss_dssp             EEEEEEEETTSCEEECC
T ss_pred             EEEEEEEecCCCCCCCC
Confidence            99999999877654443

>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1

Probab=97.76  E-value=5.3e-05  Score=70.27  Aligned_cols=86  Identities=15%  Similarity=0.093  Sum_probs=64.0

Q ss_pred             ceEEEEEeeceeEEEEeCcCC--CCCCCcceEEEEeeecCCCCCCCCceeeec--CCceeEeecCCcceeeeEEEEeccC
Q 004714          345 NMVKFEDVRATSLTVVLGSED--PSPGNIISYTLWHRRAHEGFPARPTCTLFA--PNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~--~s~~~i~Gy~LWhrks~~~y~~ept~~~~~--p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      ..++...+++++|+|-.....  .....|.||.|.||.....  .+...+...  ..+.+.|+||.|.|.|.|||.+++.
T Consensus       109 ~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~  186 (205)
T 1cfb_A          109 DNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPA--AAWENNNIFDWRQNNIVIADQPTFVKYLIKVVAIND  186 (205)
T ss_dssp             SCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTT--CCCEEEEECCTTCCEEEECSCCSSCEEEEEEEEEET
T ss_pred             eeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCC--CCcEEEEecCCCccEEEEcCCCCCcEEEEEEEEEcC
Confidence            457788999999999998776  2455699999999987653  222222222  4789999999999999999999999


Q ss_pred             CccCcc--e-eeEEec
Q 004714          421 TTELGR--C-EIWFST  433 (734)
Q Consensus       421 ~~elg~--~-E~k~~T  433 (734)
                      .|. |.  + .+.++|
T Consensus       187 ~G~-g~~ss~~v~~~T  201 (205)
T 1cfb_A          187 RGE-SNVAAEEVVGYS  201 (205)
T ss_dssp             TEE-CSSCCCCEEEES
T ss_pred             CCc-CCCCCCcEEEec
Confidence            874 43  2 445555

>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A

Probab=97.75  E-value=4.2e-05  Score=71.26  Aligned_cols=77  Identities=17%  Similarity=0.239  Sum_probs=56.9

Q ss_pred             eEEEEEe--eceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          346 MVKFEDV--RATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       346 ~~rFE~v--t~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      .+++..+  +++||+|-.+........|.||.|.||..... +..-....+....+.+.|.||.|.|+|.|||.+++..|
T Consensus       109 ~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g  188 (215)
T 1bqu_A          109 NLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDG  188 (215)
T ss_dssp             EEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGGGGCSCCSEEEECSCCSSEEEEEEEEEEETTS
T ss_pred             ceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEeccccccCccceEEeCCCCCCCEEEEEEEEccCCC
Confidence            4566655  88999999876654345699999999988643 32211111245678999999999999999999998765

>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1

Probab=97.74  E-value=0.00014  Score=70.29  Aligned_cols=88  Identities=20%  Similarity=0.204  Sum_probs=66.6

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 004714          341 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  419 (734)
Q Consensus       341 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  419 (734)
                      +.++..+++.+++++||+|-.....   ..|.||.|.||..... ..  -...+....+.+.|+||.|.|+|.|+|.+++
T Consensus        15 p~~P~~l~~~~~~~~sv~l~W~~~~---~~~~~Y~v~~~~~~~~~~~--~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~   89 (283)
T 1tdq_A           15 IDGPTQILVRDVSDTVAFVEWTPPR---AKVDFILLKYGLVGGEGGK--TTFRLQPPLSQYSVQALRPGSRYEVSISAVR   89 (283)
T ss_dssp             SCCCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEESSSSCCC--EEEEECTTCSEEEECSCCTTCEEEEEEEEEE
T ss_pred             CCCCcEEEEEecCCCeEEEEEECCC---CceeEEEEEEEEecCCCCc--EEEEeCCCCCEEEecCCCCCCEEEEEEEEEC
Confidence            3456679999999999999988765   6799999999865433 11  1223456788999999999999999999999


Q ss_pred             CCccCcceeeEEec
Q 004714          420 GTTELGRCEIWFST  433 (734)
Q Consensus       420 ~~~elg~~E~k~~T  433 (734)
                      +.|+-......+.|
T Consensus        90 ~~g~s~~~~~~~~t  103 (283)
T 1tdq_A           90 GTNESDASSTQFTT  103 (283)
T ss_dssp             TTEECCCEEEEEEC
T ss_pred             CCCCCCCeeEEEEC
Confidence            87664444444444

>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=97.74  E-value=9.8e-05  Score=68.85  Aligned_cols=87  Identities=16%  Similarity=0.213  Sum_probs=60.5

Q ss_pred             eEEEEEeeceeEEEEeCcCCCC-CC------C--cceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEE
Q 004714          346 MVKFEDVRATSLTVVLGSEDPS-PG------N--IISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVV  416 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~s-~~------~--i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvv  416 (734)
                      ..++.+|+++||+|-+...... ..      .  |.+|.|-|+.....  ..-..++....++..|.||.|.|+|.|||.
T Consensus        23 ~p~v~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~--~~~~~~~~g~~ts~~v~~L~P~T~Y~~rV~  100 (137)
T 1wk0_A           23 KPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKD--GKYKSVYVGEETNITLNDLKPAMDYHAKVQ  100 (137)
T ss_dssp             CCEEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTT--SCCEEEEEESCSEEEECSCCTTCEECEEEE
T ss_pred             CcEEEEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCC--CceEEEEecCccEEEEcCCCCCCEEEEEEE
Confidence            4557899999999999887643 21      1  68999876554322  111123457778999999999999999999


Q ss_pred             eccCCccCccee-eEEecC
Q 004714          417 SSNGTTELGRCE-IWFSTG  434 (734)
Q Consensus       417 sF~~~~elg~~E-~k~~T~  434 (734)
                      ++++.|.=-.+| +.|.|.
T Consensus       101 A~n~~G~G~~S~~~~f~T~  119 (137)
T 1wk0_A          101 AEYNSIKGTPSEAEIFTTL  119 (137)
T ss_dssp             EEETTEECCCCCCCCEECC
T ss_pred             EEeCCCcCCCCCCEEEECC
Confidence            999876422333 334444

>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A

Probab=97.68  E-value=0.00013  Score=70.97  Aligned_cols=87  Identities=20%  Similarity=0.156  Sum_probs=65.2

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ++..+++.++++++|+|-.....   ..|.||.|.|+...... ..-..++....+.+.|+||.|.|.|.|+|.++++.|
T Consensus       204 ~P~~l~~~~~~~~sv~l~W~~p~---~~~~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g  279 (290)
T 3r8q_A          204 APSNLRFLATTPNSLLVSWQPPR---ARITGYIIKYEKPGSPP-REVVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQ  279 (290)
T ss_dssp             CCEEEEEEEEETTEEEEEEECCS---SCCCEEEEEEECTTSCC-EECSSCCCTTCCEEEECSCCTTCEEEEEEEEEETTE
T ss_pred             CCCccEEEeeCCCEEEEEEeCCC---CcccEEEEEEEeCCCCc-ceeEeccCCCccEEEECCCCCCCEEEEEEEEEeCCC
Confidence            34578999999999999988654   47999999999875531 111112335688999999999999999999999987


Q ss_pred             cCcceeeEEec
Q 004714          423 ELGRCEIWFST  433 (734)
Q Consensus       423 elg~~E~k~~T  433 (734)
                      .-...-++..|
T Consensus       280 ~s~p~~~~~~T  290 (290)
T 3r8q_A          280 KSEPLIGRKKT  290 (290)
T ss_dssp             ECCCEEEEEEC
T ss_pred             cCCccccccCC
Confidence            65555444443

>3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A*

Probab=97.67  E-value=0.00014  Score=77.06  Aligned_cols=85  Identities=13%  Similarity=0.130  Sum_probs=61.3

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceee-ecCCceeEeecCCcceeeeEEEEeccCC-c
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTL-FAPNTRFVVTGLCPATEYQFKVVSSNGT-T  422 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~-~~p~~r~~vs~L~P~TEY~fkvvsF~~~-~  422 (734)
                      ..+|++++|++||+|-....  ....|..|.|=|+....  ..++.+++ ....++..|+||.|.|+|.|.|.+.+.. |
T Consensus       374 ~~l~~~~~~~~s~~l~W~~p--~~~~~~~y~v~y~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~~~~~g  449 (461)
T 3csg_A          374 TNLEVVAATPTSLLISWDAS--YSSSVSYYRITYGETGG--NSPVQEFTVPGSKSTATISGLSPGVDYTITVYAYSYYYY  449 (461)
T ss_dssp             CCCEEEEECSSCEEEECCCT--TGGGCSEEEEEEEETTC--CSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEECTTSC
T ss_pred             cceEEeccCCCeEEEEecCC--CCCcceEEEEEEEECCC--CccceEEEecCCCceEEecCCCCCCEEEEEEEEEeccCC
Confidence            36899999999999998655  33479999994444321  12245454 4558999999999999999999999987 2


Q ss_pred             cCc-ceeeEEec
Q 004714          423 ELG-RCEIWFST  433 (734)
Q Consensus       423 elg-~~E~k~~T  433 (734)
                      .++ ..|+..+|
T Consensus       450 ~~s~~~~~~~~~  461 (461)
T 3csg_A          450 YYSSPISINYRT  461 (461)
T ss_dssp             BCSCCEEEEEEC
T ss_pred             CCCCCEEEeccC
Confidence            222 23555554

>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}

Probab=97.65  E-value=0.00033  Score=61.70  Aligned_cols=84  Identities=23%  Similarity=0.225  Sum_probs=60.7

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  424 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  424 (734)
                      .-+++.+++.+||++.+...+.....|..|+|=|.....      ..++....+++.|+||.|.|+|.|.|.+..+..+=
T Consensus        12 ~~l~v~~~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~------~~~~~~~~t~~~i~gL~PgT~Y~~~V~A~~~~~~~   85 (104)
T 2dle_A           12 FDVTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGETD------SSNLNVSEPRAVIPGLRSSTFYNITVCPVLGDIEG   85 (104)
T ss_dssp             EEEEEEEECSSCEEEEEEESCSTTCCSCEEEEEEECSSC------EEEEEESSSEEECCSCCSSCEEEEEEEEESSSCCC
T ss_pred             ceEEEEEeecCEEEEEEcCCCCCCCceEEEEEEEECCCC------eEEEcCCCCEEEECCCCCCCEEEEEEEEEECCccc
Confidence            468999999999999997554444557899996653211      23556678999999999999999999998654443


Q ss_pred             cceeeEEecC
Q 004714          425 GRCEIWFSTG  434 (734)
Q Consensus       425 g~~E~k~~T~  434 (734)
                      ...=....|.
T Consensus        86 ~p~~~~~~T~   95 (104)
T 2dle_A           86 TPGFLQVHTP   95 (104)
T ss_dssp             BCEEEEEECC
T ss_pred             CCeeEEEEcc
Confidence            3333444443

>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}

Probab=97.64  E-value=0.00018  Score=64.89  Aligned_cols=76  Identities=21%  Similarity=0.258  Sum_probs=60.6

Q ss_pred             ceEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          345 NMVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ..+++.++++++|+|-++.... ....|.||.|.|+..... +.   ........+.+.|.+|.|.|.|.|+|.+++..|
T Consensus        10 ~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~---~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g   86 (197)
T 3lpw_A           10 QDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYS---TVATNCHKTSWKVDQLQEGCSYYFRVLAENEYG   86 (197)
T ss_dssp             EEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCE---EEEEEECSSEEEECCCCTTCEEEEEEEEEETTE
T ss_pred             CCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccE---EeecCCCccEEEEcCCCCCCEEEEEEEEEcCcc
Confidence            3688999999999999988643 334599999999987643 21   122356788999999999999999999999877


Q ss_pred             c
Q 004714          423 E  423 (734)
Q Consensus       423 e  423 (734)
                      .
T Consensus        87 ~   87 (197)
T 3lpw_A           87 I   87 (197)
T ss_dssp             E
T ss_pred             c
Confidence            5

>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1

Probab=97.59  E-value=0.00024  Score=64.23  Aligned_cols=81  Identities=20%  Similarity=0.282  Sum_probs=57.8

Q ss_pred             EEEeeceeEEEEeCcCCCC----CCC-cceEEEEeeec-CCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          349 FEDVRATSLTVVLGSEDPS----PGN-IISYTLWHRRA-HEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       349 FE~vt~tSv~vvL~~~~~s----~~~-i~Gy~LWhrks-~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      ..+|+++||+|-.+.....    ... |.+|.|- ++. ... |.    -+...+.+.+.|.+|.|.|+|.|||.+++..
T Consensus        24 v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve-~~~~~~~~~~----~v~~~~~t~~~v~gL~p~t~Y~frV~A~n~~   98 (120)
T 1wfu_A           24 VGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIE-EEDPKMHSYG----VIYTGYATRHVVEGLEPRTLYKFRLKVTSPS   98 (120)
T ss_dssp             CCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEE-EECTTTCCEE----EEEEESCSEEEEESCCTTCEEEEEEEEECSS
T ss_pred             eceEECCEEEEEECCCccCCccCCCCceEEEEEE-EecCCCCceE----EEecCCccEEEECCCCCCCEEEEEEEEECCC
Confidence            5699999999999876532    233 9999999 443 222 32    2334557889999999999999999999987


Q ss_pred             ccCccee-eEEecC
Q 004714          422 TELGRCE-IWFSTG  434 (734)
Q Consensus       422 ~elg~~E-~k~~T~  434 (734)
                      |.-.-++ +.+.|.
T Consensus        99 G~s~~S~~~~~~T~  112 (120)
T 1wfu_A           99 GEYEYSPVVSVATT  112 (120)
T ss_dssp             SCEEECCCEEEECC
T ss_pred             CCCCCCccEeeEcC
Confidence            7433233 445554

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B

Probab=97.57  E-value=0.00031  Score=70.55  Aligned_cols=88  Identities=17%  Similarity=0.145  Sum_probs=66.6

Q ss_pred             ccCceEEEEEeece-eEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          342 IVPNMVKFEDVRAT-SLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       342 ~~~~~~rFE~vt~t-Sv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      .++..++++.++++ +|+|-.+....  .+|.||.|.|+.....-...-..++....+.+.|++|.|.|+|.|+|.++++
T Consensus         4 ~~P~~l~~~~~~~~~sv~l~W~~~~~--~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~   81 (375)
T 3t1w_A            4 SPPTNLHLEANPDTGVLTVSWERSTT--PDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKD   81 (375)
T ss_dssp             CCCEEEEEEEETTTTEEEEEEECCSC--SSCCEEEEEEEETTCTTSCCEEEEEETTCCEEEECCCCTTCCEEEEEEEEET
T ss_pred             CCCCccEEEecCCCeEEEEEEeCCCC--CCeeeEEEEEEECCCCCCcceeEEcCCCccEEEEcCCcCCCEEEEEEEEEcC
Confidence            35567899999999 99999986532  4799999999987653111112345667899999999999999999999998


Q ss_pred             CccCcceeeEE
Q 004714          421 TTELGRCEIWF  431 (734)
Q Consensus       421 ~~elg~~E~k~  431 (734)
                      .+.-.......
T Consensus        82 ~g~s~~~~~~~   92 (375)
T 3t1w_A           82 DKESVPISDTI   92 (375)
T ss_dssp             TEECCCEEEEE
T ss_pred             CCCCCcEEeeE
Confidence            77554444443

>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}

Probab=97.52  E-value=0.00029  Score=68.45  Aligned_cols=91  Identities=9%  Similarity=0.094  Sum_probs=63.9

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CC------------------CCCceeeecCCceeEee
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FP------------------ARPTCTLFAPNTRFVVT  403 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~------------------~ept~~~~~p~~r~~vs  403 (734)
                      ++.......++++||+|.+.........|.||.|.|+..... ..                  ....+++........+.
T Consensus        89 ~~~~~~~~~~~~~sv~l~W~~P~~~~G~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  168 (232)
T 4go6_B           89 GAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHI  168 (232)
T ss_dssp             CCCEEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEC-------------CCEEEEEEEEESSSEEEEEHHHHTTBCB
T ss_pred             CCCeeeEEecCCCEEEEEEeCCCCCCCceeeEEEEEEECCCCCcceeeeccCCceeeEEEEeccCceEEEEccccEEeee
Confidence            344556667899999999987765556899999999865443 11                  12234444455566678


Q ss_pred             cCCcceeeeEEEEeccCCccCcceeeEEec
Q 004714          404 GLCPATEYQFKVVSSNGTTELGRCEIWFST  433 (734)
Q Consensus       404 ~L~P~TEY~fkvvsF~~~~elg~~E~k~~T  433 (734)
                      +|.|.|+|.|||.++|..|.=-.+|++..+
T Consensus       169 ~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~  198 (232)
T 4go6_B          169 DYTTKPAIIFRIAARNEKGYGPATQVRWLQ  198 (232)
T ss_dssp             EESSSEEEEEEEEEECSSCBCCCEEEEEEC
T ss_pred             cCccCCceEEEEEEECCCcCCCCcccEEec
Confidence            999999999999999998853356777654

>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A

Probab=97.51  E-value=0.00065  Score=63.68  Aligned_cols=87  Identities=10%  Similarity=0.075  Sum_probs=63.9

Q ss_pred             ceEEEEEee----ceeEEEEeCcCCCCC-C---CcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEE
Q 004714          345 NMVKFEDVR----ATSLTVVLGSEDPSP-G---NIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVV  416 (734)
Q Consensus       345 ~~~rFE~vt----~tSv~vvL~~~~~s~-~---~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvv  416 (734)
                      ..+.++.+.    +++|+|-........ .   .+.+|.|-||.....   +-........+++.|.+|.|.|+|.|||-
T Consensus       107 ~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~---~~~~~~~~~~~~~~l~~L~p~t~Y~v~Vr  183 (210)
T 3n06_B          107 LELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAA---EWEIHFAGQQTEFKILSLHPGQKYLVQVR  183 (210)
T ss_dssp             EEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCS---SCEEEEEETCSEEEECCCCTTCEEEEEEE
T ss_pred             ceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCC---CCEEEeccCceEEEEeccCCCCEEEEEEE
Confidence            346666553    689999887765321 1   379999999987653   12224456788999999999999999999


Q ss_pred             eccCCccCcce--eeEEecC
Q 004714          417 SSNGTTELGRC--EIWFSTG  434 (734)
Q Consensus       417 sF~~~~elg~~--E~k~~T~  434 (734)
                      ++++.|..|.|  ++.+.|.
T Consensus       184 a~~~~g~wS~wS~~~~~~Tp  203 (210)
T 3n06_B          184 CKPDHGYWSAWSPATFIQIP  203 (210)
T ss_dssp             EEESSSCCCCCCCCEEEECC
T ss_pred             EecCCCcccCCCCceeEECc
Confidence            99987777766  5566664

>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B

Probab=97.50  E-value=0.0004  Score=69.76  Aligned_cols=90  Identities=21%  Similarity=0.218  Sum_probs=69.8

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          341 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       341 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      +|++..+++..+++++|+|-.....  ...|.||.|.|+...... ..-..++....+.+.|++|.|.|+|.|+|.+++.
T Consensus        96 ~p~p~~l~~~~~~~~si~l~W~~~~--~~~i~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~  172 (375)
T 3t1w_A           96 VPQLTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGI-PIFEDFVDSSVGYYTVTGLEPGIDYDISVITLIN  172 (375)
T ss_dssp             CCCCSCCEEECCCSSEEEEECCCCC--CTTEEEEEEEEEESSSCC-SCEEEEECTTCCEEEEECCCTTCEEEEEEEEEET
T ss_pred             CCCCceEEEEecCCCeEEEEEECCC--CCCceEEEEEEEECCCCC-ceeEEEcCCCcceEEEeCCCCCCEEEEEEEEEeC
Confidence            3445578899999999999988643  357999999999765431 1112345667899999999999999999999999


Q ss_pred             CccCcceeeEEec
Q 004714          421 TTELGRCEIWFST  433 (734)
Q Consensus       421 ~~elg~~E~k~~T  433 (734)
                      .|.-........|
T Consensus       173 ~g~s~~s~~~~~t  185 (375)
T 3t1w_A          173 GGESAPTTLTQQT  185 (375)
T ss_dssp             TEECCCEEEEEEC
T ss_pred             CcccCCeeeeeec
Confidence            9866666666666

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*

Probab=97.42  E-value=0.00044  Score=77.20  Aligned_cols=86  Identities=20%  Similarity=0.223  Sum_probs=63.4

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  424 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  424 (734)
                      ..+++..++++||+|-++..+.....|.||.|.|+.....   ....++....+.+.|+||.|.|+|.|+|.+++..|. 
T Consensus       445 s~~~~~~~s~tSV~LsW~pP~~~ng~I~~Y~V~y~~~~~~---~~~~~v~~~~ts~~l~gL~P~T~Y~frVrA~n~~G~-  520 (536)
T 3fl7_A          445 PKVRLEGRSTTSLSVSWSIPPPQQSRVWKYEVTYRKKGDS---NSYNVRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQ-  520 (536)
T ss_dssp             CEEEEEECCC-CCEEEEECCTTTTTTCSEEEEEEEEC--C---CCCEEEEESSSEEECCSCCSSCEEEEEEEEECC----
T ss_pred             CCCceeeccCCeEEEEEECCcCCCCcccEEEEEEEECCCC---ceEEEEcCCCCEEEECCCCCCCEEEEEEEEEcCCcc-
Confidence            3556699999999999987654556799999999987653   334466788999999999999999999999999885 


Q ss_pred             cc-e-eeEEecC
Q 004714          425 GR-C-EIWFSTG  434 (734)
Q Consensus       425 g~-~-E~k~~T~  434 (734)
                      |. + .+.+.|.
T Consensus       521 Gp~S~~v~~~T~  532 (536)
T 3fl7_A          521 GAGSKVHEFQTL  532 (536)
T ss_dssp             CEECCCEEEECC
T ss_pred             cCCCCCEEEEeC
Confidence            43 2 4455553

>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A

Probab=97.34  E-value=0.00074  Score=62.73  Aligned_cols=87  Identities=18%  Similarity=0.218  Sum_probs=60.4

Q ss_pred             CceEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCCCCCCCceeee-----cCCceeEeecCCcceeeeEEEEe
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEGFPARPTCTLF-----APNTRFVVTGLCPATEYQFKVVS  417 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~y~~ept~~~~-----~p~~r~~vs~L~P~TEY~fkvvs  417 (734)
                      +-.+++..+++ +++|-.+.... ....|.||.|.||.....   +...+..     ...+.+.|+||.|.|.|.|||.+
T Consensus        12 P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A   87 (209)
T 2vkw_A           12 PSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEE---VWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAA   87 (209)
T ss_dssp             CEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCC---CCEEEEEEHHHHHHHSEEEECCCCTTCEEEEEEEE
T ss_pred             CcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCC---CceEeEeeccCCCccceEEeCCCCCCCeEEEEEEE
Confidence            34678888888 67887777543 334599999999977543   1122222     23568999999999999999999


Q ss_pred             ccCCccCcceee-EEecC
Q 004714          418 SNGTTELGRCEI-WFSTG  434 (734)
Q Consensus       418 F~~~~elg~~E~-k~~T~  434 (734)
                      ++..|.-..++. .+.|.
T Consensus        88 ~n~~G~~~~s~~~~~~T~  105 (209)
T 2vkw_A           88 LNGKGLGEISAASEFKTQ  105 (209)
T ss_dssp             EETTEECCCCCCEEEECC
T ss_pred             EcCCcccCCccccccccc
Confidence            998875433333 34443

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A

Probab=97.33  E-value=0.00078  Score=67.32  Aligned_cols=87  Identities=17%  Similarity=0.153  Sum_probs=65.3

Q ss_pred             cCceEEEEEeece-eEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          343 VPNMVKFEDVRAT-SLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       343 ~~~~~rFE~vt~t-Sv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      ++..+++..++.+ ||+|-.+...  ...|.||.|.|+.........-..++....+.+.|++|.|.|+|.|+|.+++..
T Consensus         4 ~P~~l~~~~~~~~~sv~l~W~~~~--~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~   81 (368)
T 1fnf_A            4 PPTNLHLEANPDTGVLTVSWERST--TPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKDD   81 (368)
T ss_dssp             CCEEEEEEECSSSSCEEEEEECCS--CSSCCEEEEEEEETTTCSSCCEEEEECTTCCEEECCCCCTTSCEEEEEEEEETT
T ss_pred             CCcceEEEecCCCcEEEEEEeCCC--CCCceEEEEEEEECCCCCCceeEEEecCCcCEEEECCCCCCCEEEEEEEEEcCC
Confidence            4457888999987 6999887754  356999999999876542222233456778999999999999999999999988


Q ss_pred             ccCcceeeEE
Q 004714          422 TELGRCEIWF  431 (734)
Q Consensus       422 ~elg~~E~k~  431 (734)
                      |.-......+
T Consensus        82 g~s~~~~~~~   91 (368)
T 1fnf_A           82 KESVPISDTI   91 (368)
T ss_dssp             EECCCEEEEE
T ss_pred             CccCceeeee
Confidence            7544444433

>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A

Probab=97.32  E-value=0.00028  Score=66.09  Aligned_cols=80  Identities=13%  Similarity=0.086  Sum_probs=55.4

Q ss_pred             eEEEEEe------eceeEEEEeCcCCCCCCCcceEEEEee-ecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEe
Q 004714          346 MVKFEDV------RATSLTVVLGSEDPSPGNIISYTLWHR-RAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVS  417 (734)
Q Consensus       346 ~~rFE~v------t~tSv~vvL~~~~~s~~~i~Gy~LWhr-ks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvs  417 (734)
                      .+.++.+      ++++|+|-.........-+.||.|.|| ..... +..  .-.+...++.+.|.+|.|.|+|.|||-+
T Consensus       114 ~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~--~~~~~~~~~~~~l~~L~p~t~Y~~~Vra  191 (215)
T 1cd9_B          114 LQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTL--VFHLPSSKDQFELCGLHQAPVYTLQMRC  191 (215)
T ss_dssp             EEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEE--EEEEESCEEEEEECCCCSCSCEEEEEEE
T ss_pred             EEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEE--EecccCcceEEEEcCCCCCCEEEEEEEe
Confidence            4666666      688999998766543333479999999 54433 221  1123445788999999999999999999


Q ss_pred             ccC--CccCcce
Q 004714          418 SNG--TTELGRC  427 (734)
Q Consensus       418 F~~--~~elg~~  427 (734)
                      ++.  .|.++.|
T Consensus       192 ~~~~g~G~wS~w  203 (215)
T 1cd9_B          192 IRSSLPGFWSPW  203 (215)
T ss_dssp             EESSSCCCCCCC
T ss_pred             eECCCCCCCcCC
Confidence            997  4455544

>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A

Probab=97.31  E-value=0.00057  Score=68.79  Aligned_cols=87  Identities=11%  Similarity=0.065  Sum_probs=61.5

Q ss_pred             ceEEEEEee--ceeEEEEeCcCCC--CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 004714          345 NMVKFEDVR--ATSLTVVLGSEDP--SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  419 (734)
Q Consensus       345 ~~~rFE~vt--~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  419 (734)
                      ..++++.++  +++|+|-......  ...-+.+|.|+||..... +..   ..+...++.++|.+|.|.|+|.|||.+++
T Consensus       201 ~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~---~~~~~~~~~~~l~~L~p~t~Y~~rVrA~n  277 (325)
T 1n26_A          201 ANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTT---WMVKDLQHHCVIHDAWSGLRHVVQLRAQE  277 (325)
T ss_dssp             EEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEE---EECGGGCSEEEESSCCTTCCEEEEEEEEE
T ss_pred             cceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEE---EcccCCceEEEEeCCCCCCeEEEEEEEec
Confidence            357788886  4689998877653  334579999999987543 321   11234578999999999999999999999


Q ss_pred             C--CccCcce-eeEEecC
Q 004714          420 G--TTELGRC-EIWFSTG  434 (734)
Q Consensus       420 ~--~~elg~~-E~k~~T~  434 (734)
                      .  .|.++.| +..+.|.
T Consensus       278 ~~g~G~~S~wS~~~~~~~  295 (325)
T 1n26_A          278 EFGQGEWSEWSPEAMGTP  295 (325)
T ss_dssp             TTTBSCCCCCCCCEEECC
T ss_pred             CCCCCCCcCCCCccceec
Confidence            5  4556654 4444443

>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1

Probab=97.30  E-value=0.0011  Score=57.32  Aligned_cols=72  Identities=15%  Similarity=0.158  Sum_probs=55.1

Q ss_pred             ceEEEEEee--ceeEEEEeCcCCC---CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 004714          345 NMVKFEDVR--ATSLTVVLGSEDP---SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  418 (734)
Q Consensus       345 ~~~rFE~vt--~tSv~vvL~~~~~---s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  418 (734)
                      .-++++.+.  +++|+|-.+....   ....+.+|.|.||..... +.    .+.....+.+.|.+|.|+|+|.|+|-+.
T Consensus        12 ~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~----~~~~~~~~~~~l~~L~p~t~Y~~~VRa~   87 (109)
T 1uc6_A           12 ENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQ----HVELSNGTAHTITDAYAGKEYIIQVAAK   87 (109)
T ss_dssp             EEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCC----CEEESSCSEEEETTCCSSSCEEEEEECC
T ss_pred             cceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcE----EEecccCCEEEEeCCCCCCEEEEEEEEE
Confidence            346777764  5899998877653   223689999999998764 32    2344567899999999999999999998


Q ss_pred             cC
Q 004714          419 NG  420 (734)
Q Consensus       419 ~~  420 (734)
                      +.
T Consensus        88 ~~   89 (109)
T 1uc6_A           88 DN   89 (109)
T ss_dssp             BS
T ss_pred             eC
Confidence            74

>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A

Probab=97.27  E-value=0.001  Score=66.40  Aligned_cols=82  Identities=28%  Similarity=0.375  Sum_probs=63.1

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCC-ceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARP-TCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ep-t~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      ++..+++..+++++|+|-.....   ..|.||+|.|+.....  ..+ ...+....+.+.|.||.|.|.|.|+|.+++..
T Consensus       188 ~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~  262 (368)
T 1fnf_A          188 SPTGIDFSDITANSFTVHWIAPR---ATITGYRIRHHPEHFS--GRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGR  262 (368)
T ss_dssp             CCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECSCCS--SCCEEEEEETTCCEEEEESCCTTCEEEEEEEEEETT
T ss_pred             CCCccEEEEccCCEEEEEEeCCC---CCcCEEEEEEecCCCC--CCccEEEeCCCcCEEEECCCCCCCEEEEEEEEEeCC
Confidence            44568899999999999987653   5799999999977543  112 23445678899999999999999999999988


Q ss_pred             ccCcceee
Q 004714          422 TELGRCEI  429 (734)
Q Consensus       422 ~elg~~E~  429 (734)
                      |+-.....
T Consensus       263 g~~~~~~~  270 (368)
T 1fnf_A          263 EESPLLIG  270 (368)
T ss_dssp             EECCCEEE
T ss_pred             ccCCcccc
Confidence            75333333

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}

Probab=97.13  E-value=0.0012  Score=74.18  Aligned_cols=82  Identities=17%  Similarity=0.132  Sum_probs=59.8

Q ss_pred             EEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCCC--CCCC------ceeeecCCceeEeecCCcceeeeEEEEe
Q 004714          347 VKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEGF--PARP------TCTLFAPNTRFVVTGLCPATEYQFKVVS  417 (734)
Q Consensus       347 ~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~y--~~ep------t~~~~~p~~r~~vs~L~P~TEY~fkvvs  417 (734)
                      |++++++++ |+|-++.... ....|+||+|.|+......  ..-+      +.+++...+.++|+||.|.|+|.|+|.+
T Consensus       535 v~v~~~~~t-i~lsW~pP~~~~ng~I~gY~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A  613 (680)
T 1zlg_A          535 FIVQDVNIT-GHFSWKMAKANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLRPSTLYRLEVQV  613 (680)
T ss_pred             EEEeccCce-EEEEecCCCCCCCCCceeEEEEEEEccCCCccccccceeeecccccCCcccEEEecCCCCCceEEEEEEE
Confidence            788888888 8888876653 3568999999998763321  1111      1234456889999999999999999999


Q ss_pred             ccCCccCcceeeE
Q 004714          418 SNGTTELGRCEIW  430 (734)
Q Consensus       418 F~~~~elg~~E~k  430 (734)
                      |+..|+ |..+..
T Consensus       614 ~n~~G~-G~~~~~  625 (680)
T 1zlg_A          614 LTPGGE-GPATIK  625 (680)
T ss_pred             EcCCCc-CCCcce
Confidence            998874 544433

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}

Probab=97.03  E-value=0.0015  Score=72.75  Aligned_cols=88  Identities=16%  Similarity=0.180  Sum_probs=64.5

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC---CC--CCC-ceeeecCCceeEeecCCcceeeeEEEEecc
Q 004714          346 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG---FP--ARP-TCTLFAPNTRFVVTGLCPATEYQFKVVSSN  419 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~---y~--~ep-t~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  419 (734)
                      .+.... +++||+|-.+........|.||+|.||.....   +.  ... +.++....+.++|+||.|.|.|.|||.+++
T Consensus       469 ~~~~~~-~~~si~l~W~~P~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n  547 (731)
T 2v5y_A          469 SIQGST-FEEKIFLQWREPTQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYSFTIRAST  547 (731)
T ss_dssp             TCEEEE-ETTEEEEECCCCSCCSSCCCEEEEEEEEEEECC---CCCCCEEEEEEETTCCEEEECSCCTTEEEEEEEEEEE
T ss_pred             eEEeee-cCCeEEEEEcCCCCCCCCccceEEEEEECcCCCccccccCcceEEeecCCcceEEecCCCCCCEEEEEEEEEe
Confidence            444443 58899999887654456899999999987542   11  111 223456778999999999999999999999


Q ss_pred             CCccCcceeeEEecC
Q 004714          420 GTTELGRCEIWFSTG  434 (734)
Q Consensus       420 ~~~elg~~E~k~~T~  434 (734)
                      ..|.=-.++..+.|.
T Consensus       548 ~~G~g~~s~~~~~T~  562 (731)
T 2v5y_A          548 AKGFGPPATNQFTTK  562 (731)
T ss_dssp             TTEEEEEEEEEEECC
T ss_pred             CCccCCCcccEEEcC
Confidence            987655567777765

>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A

Probab=97.01  E-value=0.0022  Score=62.05  Aligned_cols=85  Identities=12%  Similarity=-0.054  Sum_probs=58.2

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCC--CCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          346 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFP--ARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~--~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      .++..... +||+|-......   .|.||.|-|+.....-.  .+-..+.....+.++|.||.|.|+|.|+|.+++..|.
T Consensus       107 ~~~~~~~~-~si~l~W~~p~~---~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~  182 (290)
T 3l5i_A          107 DLKAFPKD-NMLWVEWTTPRE---SVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGP  182 (290)
T ss_dssp             EEEEEEET-TEEEEEEECCSS---CCCEEEEEEEEECSSSCCCCEEEEEETTCSEEECCSCCCTTCEEEEEEEEEETTEE
T ss_pred             eeEEEeCC-CeEEEEEeCCCC---CCCcEEEEEEECCCCCCCCcCeEEccCCCcceEEecCcCCccEEEEEEEEEeCCcc
Confidence            45555554 789888876543   79999999888755411  1111223445667888999999999999999999875


Q ss_pred             CcceeeEEecC
Q 004714          424 LGRCEIWFSTG  434 (734)
Q Consensus       424 lg~~E~k~~T~  434 (734)
                      =....+..+|.
T Consensus       183 g~~~~~~~~t~  193 (290)
T 3l5i_A          183 GSPESIKAYLK  193 (290)
T ss_dssp             CCCEEEEEESS
T ss_pred             cccEEEEeEcc
Confidence            43344555554

>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}

Probab=97.01  E-value=0.0019  Score=72.39  Aligned_cols=92  Identities=11%  Similarity=0.167  Sum_probs=64.6

Q ss_pred             cCceEEEEEe--ece---eEEEEeCcCCCCCCCcceEEEEeeecC--C-CCC--CCCceeeecCCceeEeecCCcceeee
Q 004714          343 VPNMVKFEDV--RAT---SLTVVLGSEDPSPGNIISYTLWHRRAH--E-GFP--ARPTCTLFAPNTRFVVTGLCPATEYQ  412 (734)
Q Consensus       343 ~~~~~rFE~v--t~t---Sv~vvL~~~~~s~~~i~Gy~LWhrks~--~-~y~--~ept~~~~~p~~r~~vs~L~P~TEY~  412 (734)
                      ++..+++.++  +++   ||+|.+.........|.||+|.|+...  . ..+  ......+..+.+.+.|+||.|.|+|.
T Consensus       269 ~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~  348 (680)
T 1zlg_A          269 APANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYV  348 (680)
T ss_pred             CCCceEeeeeeecCCCceEEEEEecCCCCCCCceeEEEEEEEecccccccCCccceEEEEEcCCeeEEEeCCCCCCCEEE
Confidence            4456888888  888   999999866544467999999998331  1 111  11223455567899999999999999


Q ss_pred             EEEEeccCCccCccee----eEEecC
Q 004714          413 FKVVSSNGTTELGRCE----IWFSTG  434 (734)
Q Consensus       413 fkvvsF~~~~elg~~E----~k~~T~  434 (734)
                      |||.+++..|.=..++    +.+.|.
T Consensus       349 ~~V~A~n~~G~g~~S~~~~~v~~~T~  374 (680)
T 1zlg_A          349 VELQAITYWGQTRLKSAKVSLHFTST  374 (680)
T ss_pred             EEEEEEECCCcCCCCCCceeEEEECC
Confidence            9999999877532222    555554

>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1

Probab=96.99  E-value=0.00094  Score=66.38  Aligned_cols=86  Identities=16%  Similarity=0.191  Sum_probs=56.5

Q ss_pred             eEEEEEe------eceeEEEEeCcCCCCCCCcceEEEEee-ecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEe
Q 004714          346 MVKFEDV------RATSLTVVLGSEDPSPGNIISYTLWHR-RAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVS  417 (734)
Q Consensus       346 ~~rFE~v------t~tSv~vvL~~~~~s~~~i~Gy~LWhr-ks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvs  417 (734)
                      .++++.+      ++++|+|-.+........+.||.|.|| ..... +...  -.+...++.+.|.+|.|.|+|.|||.+
T Consensus       208 ~~~~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~--~~~~~~~~~~~l~~L~p~t~Y~~rVra  285 (313)
T 2d9q_B          208 LRTMDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALV--GPLPLEALQYELCGLLPATAYTLQIRC  285 (313)
T ss_dssp             EEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEE--EEECSCEEEEEECSCCSCCCEEEEEEE
T ss_pred             eeEEEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCCCCcEEc--ccccCcceEEEEeCCCCCCeEEEEEEe
Confidence            4566665      578999988876533333679999999 44332 3211  112335678999999999999999999


Q ss_pred             ccCC--ccCcce--eeEEec
Q 004714          418 SNGT--TELGRC--EIWFST  433 (734)
Q Consensus       418 F~~~--~elg~~--E~k~~T  433 (734)
                      ++..  |.++.|  ++.+.|
T Consensus       286 ~~~~g~G~wS~wS~~~~~~T  305 (313)
T 2d9q_B          286 IRWPLPGHWSDWSPSLELRT  305 (313)
T ss_dssp             EECSSCCCCCCCCCCEEECC
T ss_pred             eECCCCCccCCCCCccceeC
Confidence            9974  444433  344444

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E

Probab=96.97  E-value=0.001  Score=77.32  Aligned_cols=112  Identities=15%  Similarity=0.214  Sum_probs=75.5

Q ss_pred             HHHHHHHHHhhhhhhcCCCC-CCCCC-------CCCCcccCceEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecC
Q 004714          312 QKLCACAVESLDKMISNTIL-PNPSV-------QGSNVIVPNMVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAH  382 (734)
Q Consensus       312 QKLCs~Aie~~Ds~ls~~~~-~~~~~-------q~~~l~~~~~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~  382 (734)
                      .+||-.-|..++.++..... ....+       +..--...-.+++.+++++||+|.+..... ....|.||.|.||.+.
T Consensus       432 ~~LC~~~i~~~~~~~g~~~~~~~~di~~~tNgd~~~C~~~~~~l~v~~~s~~sv~LsW~~p~~~~~~~i~gY~V~y~~~~  511 (897)
T 2dtg_E          432 PKLCLSEIHKMEEVSGTKGRQERNDIALKTNGDQASCENELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAP  511 (897)
T ss_dssp             TTSCHHHHHHHHHHTTCSSSCCSSSBCSTTBSTTCCCSCCBCCCSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCC
T ss_pred             CcccccccccHHHhcCCcccccccceehhhcCCccccccceeEEEEEEEecCeEEEEecCCCCCCCceeeeEEEEEEeCC
Confidence            47999999999998654321 00001       111122334678999999999999987764 4457999999999863


Q ss_pred             CC----CCCCCce----------eeec--------CCceeEeecCCcceeeeEEEEe-ccCCcc
Q 004714          383 EG----FPARPTC----------TLFA--------PNTRFVVTGLCPATEYQFKVVS-SNGTTE  423 (734)
Q Consensus       383 ~~----y~~ept~----------~~~~--------p~~r~~vs~L~P~TEY~fkvvs-F~~~~e  423 (734)
                      ..    |.....|          ..+.        ..+.++|++|.|.|+|.|||.+ ++..|+
T Consensus       512 ~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~~~~~~l~~L~P~T~Y~~~V~A~~n~~G~  575 (897)
T 2dtg_E          512 YQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLMRGLKPWTQYAIFVKTLVTFSDE  575 (897)
T ss_dssp             TTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCCEEEECSCCSSCBCCBEEEECCCCCSS
T ss_pred             CCCcccccCccccCCCcceEEecCCCccccccccccccceEeCCCCCCcEEEEEEEEEEeccCC
Confidence            11    1111111          0111        2588999999999999999999 998886

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*

Probab=96.95  E-value=0.003  Score=70.57  Aligned_cols=77  Identities=18%  Similarity=0.123  Sum_probs=56.3

Q ss_pred             EEEeeceeEEEEeCcCCCC-CCCcceEEEEeeecCCCC------CCCCc---eeeecCCceeEeecCCcceeeeEEEEec
Q 004714          349 FEDVRATSLTVVLGSEDPS-PGNIISYTLWHRRAHEGF------PARPT---CTLFAPNTRFVVTGLCPATEYQFKVVSS  418 (734)
Q Consensus       349 FE~vt~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~y------~~ept---~~~~~p~~r~~vs~L~P~TEY~fkvvsF  418 (734)
                      ..+|+++||+|-....... ...|.||.|+|++.....      .....   .......+++.|+||.|.|.|.|||.++
T Consensus       341 ~~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~  420 (536)
T 3fl7_A          341 TAVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEAR  420 (536)
T ss_dssp             EEECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECCTTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEE
T ss_pred             EEEecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccCCCceEEEeecCCccceeEeCCCCCCCEEEEEEEEE
Confidence            4579999999999876543 336999999999843210      01100   0122468899999999999999999999


Q ss_pred             cCCccCc
Q 004714          419 NGTTELG  425 (734)
Q Consensus       419 ~~~~elg  425 (734)
                      ++.|..+
T Consensus       421 N~~G~~s  427 (536)
T 3fl7_A          421 NGVSGLV  427 (536)
T ss_dssp             CTTGGGC
T ss_pred             ecCCCCC
Confidence            9988864

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}

Probab=96.92  E-value=0.00027  Score=75.63  Aligned_cols=75  Identities=15%  Similarity=0.212  Sum_probs=61.5

Q ss_pred             ceEEEEEeeceeEEEEeCcCC--CCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          345 NMVKFEDVRATSLTVVLGSED--PSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~--~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ..+++.+++++||+|-.....  .....|.||.|-|+.....   +....+....+.+.|+||.|.|.|.|+|.+++..|
T Consensus       500 p~l~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G  576 (589)
T 3l5h_A          500 PTVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGN---ETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG  576 (589)
T ss_dssp             CCCCEECCCSSCBEEBCCCCCHHHHCSCEEEEEECCBCSSCC---CCCEEECTTCCBCCBCSCCSSCCEECCEEEEETTE
T ss_pred             CeEEEeecccceEEEEecCCCHHHcCccceeEEEEEEeCCCC---eEEEEeCCcccEEEecCCCCCCEEEEEEEEEeCCC
Confidence            458888999999999988743  2356899999999886553   12345667889999999999999999999999998

>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A

Probab=96.80  E-value=0.0038  Score=58.03  Aligned_cols=76  Identities=12%  Similarity=0.025  Sum_probs=57.1

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCcee-eecCCceeEeecC-CcceeeeEEEEeccCCcc
Q 004714          346 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCT-LFAPNTRFVVTGL-CPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~-~~~p~~r~~vs~L-~P~TEY~fkvvsF~~~~e  423 (734)
                      .++...++.++|+|......... .+.||.|.||......   ..|. .....+.+.|.+| .|.|+|.|||.+++..|.
T Consensus        13 ~l~~~~~~~~sv~l~W~~p~~~~-~~~~Y~v~~~~~~~~~---~~~~~~~~~~~~~~i~~L~~~~t~Y~~~V~A~n~~G~   88 (215)
T 1bqu_A           13 NLSCIVNEGKKMRCEWDGGRETH-LETNFTLKSEWATHKF---ADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGK   88 (215)
T ss_dssp             EEEEEEETTSCCEEEEECCSCCS-SCCEEEEEEEETTEEC---CCEECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEE
T ss_pred             eeEeEECCCCcEEEEcCCCCCCC-CCceEEEEEEEcCCCc---cccccccCCcceEEEcCCccccccEEEEEEEEecccC
Confidence            47888889999999888765432 3579999999875431   1122 2334689999999 999999999999998876


Q ss_pred             Cc
Q 004714          424 LG  425 (734)
Q Consensus       424 lg  425 (734)
                      -.
T Consensus        89 ~~   90 (215)
T 1bqu_A           89 VT   90 (215)
T ss_dssp             EE
T ss_pred             cc
Confidence            43

>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}

Probab=96.62  E-value=0.0089  Score=57.01  Aligned_cols=83  Identities=16%  Similarity=0.075  Sum_probs=58.6

Q ss_pred             eEEEEEeeceeEEEEeCcCCCC--CC--------CcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEE
Q 004714          346 MVKFEDVRATSLTVVLGSEDPS--PG--------NIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKV  415 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~s--~~--------~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkv  415 (734)
                      .|++ ++..+||.|.+......  ..        .+.+|.|=||+.....  +  ..+..+++.+.|.+|.|.|+|+|+|
T Consensus        98 ~v~~-~~~~~si~v~w~~P~~~~~~~~~~~~~~~~~l~Y~v~y~~~~~~~--~--~~~~~~~~~~~l~~L~p~t~Ycv~V  172 (201)
T 3lqm_A           98 GMQV-EVLADCLHMRFLAPKIENEYETWTMKNVYNSWTYNVQYWKQGTDE--K--FQITPQYDFEVLRNLEPWTTYCVQV  172 (201)
T ss_dssp             EEEE-EEETTEEEEEEECCEEECSSCEEEHHHHCTTCEEEEEEEETTCCC--C--EEECCSSSEEEECSCCTTCEEEEEE
T ss_pred             EEEE-EEeCCEEEEEEcCCCccCCCcccCHHHhCCceEEEEEEEECCCCc--E--EEEEecCceEEEecCCCCCcEEEEE
Confidence            5777 56789999998776521  21        3789999887754421  1  2345678899999999999999999


Q ss_pred             EeccCC-ccCcc-eeeEEec
Q 004714          416 VSSNGT-TELGR-CEIWFST  433 (734)
Q Consensus       416 vsF~~~-~elg~-~E~k~~T  433 (734)
                      -+++.. +..|. ++..|++
T Consensus       173 ~a~~~~~~~~g~~S~~~c~~  192 (201)
T 3lqm_A          173 RGFLPDRNKAGEWSEPVCEQ  192 (201)
T ss_dssp             EEEETTTTEECCCCCCEEEE
T ss_pred             EEEeccCCCCCCcCCCEeEE
Confidence            999863 33443 3555554

>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}

Probab=96.61  E-value=0.0018  Score=69.26  Aligned_cols=76  Identities=17%  Similarity=0.263  Sum_probs=57.6

Q ss_pred             EEE--EEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          347 VKF--EDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       347 ~rF--E~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      +++  .++++++|+|-..........+.+|.|.||..... +..-.........+.+.|.+|.|.|+|.|||.+++..|
T Consensus       205 ~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g  283 (589)
T 3l5h_A          205 LSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDG  283 (589)
T ss_dssp             CEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTTSSCSCCSEEEECSCCSSCCEEEEEEEEESSS
T ss_pred             EEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccccCcCceeEEEECCCCCCCEEEEEEEEEeCCC
Confidence            445  46889999999887654445789999999988654 43322222334568999999999999999999999765

>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}

Probab=96.59  E-value=0.0023  Score=71.32  Aligned_cols=90  Identities=13%  Similarity=0.123  Sum_probs=65.3

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCC-C--CCCCceeeecCCceeEeecCCcceeeeEEEEe
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEG-F--PARPTCTLFAPNTRFVVTGLCPATEYQFKVVS  417 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~-y--~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvs  417 (734)
                      ++..+++.++++++|+|-......  ....+.||.|.||..... .  -.+....+....+.+.|++|.|.|+|.|||.+
T Consensus       362 ~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A  441 (731)
T 2v5y_A          362 GPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLIL  441 (731)
T ss_dssp             CCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEE
T ss_pred             CCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeEEEEecCCcceEEECCCCCCCEEEEEEEE
Confidence            345788999999999999887642  245678999999987532 1  00101134456789999999999999999999


Q ss_pred             ccCCccCccee-eEEec
Q 004714          418 SNGTTELGRCE-IWFST  433 (734)
Q Consensus       418 F~~~~elg~~E-~k~~T  433 (734)
                      ++..|. |.++ +.+.|
T Consensus       442 ~n~~G~-s~S~~~~~~T  457 (731)
T 2v5y_A          442 MNPEGR-KESQELIVQT  457 (731)
T ss_dssp             ECSSCE-EECCCEEEEC
T ss_pred             EcCCCC-CCCceEEEEc
Confidence            999887 4443 34444

>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}

Probab=96.46  E-value=0.0083  Score=60.73  Aligned_cols=85  Identities=19%  Similarity=0.237  Sum_probs=56.8

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCC-------CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEE
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPS-------PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVV  416 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s-------~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvv  416 (734)
                      +..|+++... +||+|.+. ....       ...+.+|.|-||+....   +. ..+..+.+++.|.||.|.|.|+|+|-
T Consensus       104 pP~v~~~~~~-~si~v~w~-P~~~~~~~~~~~g~~l~Y~v~y~~~~~~---~~-~~~~~~~~~~~l~~L~p~t~Y~~~V~  177 (306)
T 3s98_A          104 PPEVHLEAED-KAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSG---VE-ERIENIYSRHKIYKLSPETTYCLKVK  177 (306)
T ss_dssp             CCEEEEEECS-SCEEEEEE-CC---CCCC-----CCEEEEEEEETTTC---CC-EEEEEECTEEEECSCCTTCEEEEEEE
T ss_pred             CCeEEEEEcC-CEEEEEEE-CCCCCCcceeccCCcEEEEEEEEECCCC---Ce-EEEecccceEEEccCCCCCeEEEEEE
Confidence            3358877544 68999887 3211       24689999999987553   11 22455789999999999999999999


Q ss_pred             eccCC-ccCc-ceeeEEecC
Q 004714          417 SSNGT-TELG-RCEIWFSTG  434 (734)
Q Consensus       417 sF~~~-~elg-~~E~k~~T~  434 (734)
                      +|+.. ...| .++..|.+-
T Consensus       178 A~~~~~~g~g~~S~~~~~~T  197 (306)
T 3s98_A          178 AALLTSWKIGVYSPVHCIKT  197 (306)
T ss_dssp             EEEGGGTEECCCCCCEEEEC
T ss_pred             EEEccCCCCCCCCCcEeeEe
Confidence            99942 2334 345555543

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E

Probab=96.36  E-value=0.0067  Score=70.62  Aligned_cols=39  Identities=15%  Similarity=0.193  Sum_probs=31.3

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecC
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAH  382 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~  382 (734)
                      +-.+++..++++||+|.++........|.||.|+|+...
T Consensus       598 P~~l~~~~~s~tsI~LsW~pP~~~nG~I~~Y~V~~~~~~  636 (897)
T 2dtg_E          598 PLDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQA  636 (897)
T ss_dssp             CEEEEEEECSSSCEEEEEECCCCSSSSCSEEECCEEEEC
T ss_pred             CcceEEEeCCCCEEEEEEeCCCCCCCCeeEEEEEEEECC
Confidence            445899999999999999877544556999999887643

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=96.34  E-value=0.0096  Score=66.28  Aligned_cols=75  Identities=16%  Similarity=0.276  Sum_probs=59.3

Q ss_pred             ceEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          345 NMVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      -...+++|+.+||++.+..... -.-.|+||.|=+|..... ..    .+--.+.+.+.|+||.|.++|.|||.+.|..|
T Consensus        14 ~~P~v~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~----~v~~~~~t~~~V~~L~~g~~Y~FRV~A~N~~G   89 (573)
T 3uto_A           14 RFPIIENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWS----PCAKSRYTYTTIEGLRAGKQYEFRIIAENKHG   89 (573)
T ss_dssp             EEEEEEEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCE----EEEEESSSEEEECCCCTTCEEEEEEEEEETTE
T ss_pred             CCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceE----EeccccCCEEEeCCCCCCCcEeEEEEEEcCce
Confidence            4568999999999999987654 345799999988877654 32    11234788999999999999999999999866


Q ss_pred             c
Q 004714          423 E  423 (734)
Q Consensus       423 e  423 (734)
                      .
T Consensus        90 ~   90 (573)
T 3uto_A           90 Q   90 (573)
T ss_dssp             E
T ss_pred             E
Confidence            3

>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A

Probab=96.14  E-value=0.0097  Score=58.68  Aligned_cols=74  Identities=12%  Similarity=0.023  Sum_probs=55.2

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCcee-eecCCceeEeecC-CcceeeeEEEEeccCCcc
Q 004714          346 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCT-LFAPNTRFVVTGL-CPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~-~~~p~~r~~vs~L-~P~TEY~fkvvsF~~~~e  423 (734)
                      .++.+.++.++|++-........ .++||.|.||......   -.|. .....+.+.|.+| .|.|+|.|||.+++..|.
T Consensus       109 ~l~~~~~~~~~v~l~W~~~~~~~-~~~~Y~v~~~~~~~~~---~~~~~~~~~~~~~~i~~L~~p~t~Y~f~V~A~N~~G~  184 (303)
T 1i1r_A          109 NLSCIVNEGKKMRCEWDGGRETH-LETNFTLKSEWATHKF---ADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGK  184 (303)
T ss_dssp             EEEEEEETTSCCEEEEECCSCCS-SCCEEEEEEEETTEEC---CCEECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEE
T ss_pred             eeEEEECCCCcEEEEccCCCCCC-CCcCEEEEEEecCCCC---ccCCCcCCCceEEEECCcCcccccEEEEEEEEcCCCC
Confidence            37777888899999988665322 3679999999765321   1121 2334688999999 999999999999998775

>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*

Probab=96.13  E-value=0.03  Score=54.52  Aligned_cols=92  Identities=16%  Similarity=0.195  Sum_probs=64.7

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCC--CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPS--PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s--~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      ++..++.+.+...++.|-......+  ...+.-|.|-||+....+.....-++...++.+.|.+|.|.|+|.|+|=+-+.
T Consensus       108 pP~~l~~~~~~~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~~w~~~~~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~  187 (214)
T 2b5i_B          108 APISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVKPL  187 (214)
T ss_dssp             CCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCEEECSCCCEEEECSCCTTCEEEEEEEEEES
T ss_pred             CCceEEEEEecCCeEEEEECCCCccccCCCceEEEEEEecCCCChheeeeeeecccceEEEeccCCCCCEEEEEEEEeeC
Confidence            3446777877778888888776542  23478999999987543433333345667899999999999999999999876


Q ss_pred             CccC---cce--eeEEecC
Q 004714          421 TTEL---GRC--EIWFSTG  434 (734)
Q Consensus       421 ~~el---g~~--E~k~~T~  434 (734)
                      .+..   |.|  ++.+.|.
T Consensus       188 ~~~~G~WS~WS~~~~~~T~  206 (214)
T 2b5i_B          188 QGEFTTWSPWSQPLAFRTK  206 (214)
T ss_dssp             CCSSCCCCCCCCCEEEECC
T ss_pred             CCCCCCccCCCCCEEEEcC
Confidence            4433   433  4555553

>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*

Probab=96.11  E-value=0.016  Score=57.88  Aligned_cols=75  Identities=12%  Similarity=0.201  Sum_probs=52.7

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CC---CCCc-e------eeecCCceeEeecCCcceeeeE
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FP---ARPT-C------TLFAPNTRFVVTGLCPATEYQF  413 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~---~ept-~------~~~~p~~r~~vs~L~P~TEY~f  413 (734)
                      ..++++ ++.++|+|-.+........+.+|.|=||..... ..   ..++ |      ......+.+.|.+|.|.|+|.|
T Consensus       204 ~~l~~~-~~~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~~~~~~~~~~~~l~~L~p~t~Y~~  282 (314)
T 3bpo_C          204 HIKNLS-FHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCFMVPGVLPDTLNTV  282 (314)
T ss_dssp             EEEEEE-EETTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEEEEESCCCCCCTTSSCCCSSEEEEEEESCCTTSCEEE
T ss_pred             CEEEEE-EcCCcEEEEEeCCCccCCceEEEEEEEEECCCCcceEEecccccccccccccccCCceEEEEccCCCCCEEEE
Confidence            357787 889999999887764344578999999976543 11   0000 0      0123567899999999999999


Q ss_pred             EEEeccC
Q 004714          414 KVVSSNG  420 (734)
Q Consensus       414 kvvsF~~  420 (734)
                      ||-+.+.
T Consensus       283 qVra~~~  289 (314)
T 3bpo_C          283 RIRVKTN  289 (314)
T ss_dssp             EEEEEEC
T ss_pred             EEEeeec
Confidence            9999885

>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A

Probab=96.09  E-value=0.019  Score=55.19  Aligned_cols=88  Identities=13%  Similarity=0.056  Sum_probs=61.6

Q ss_pred             CceEEEEEee-ceeEEEEeCcCCCC-CCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          344 PNMVKFEDVR-ATSLTVVLGSEDPS-PGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       344 ~~~~rFE~vt-~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      +..++.+.+. +++|.|-....... ...+.+|.|.||..... ...  ...+....+.+.|.+|.|.|+|.|+|-+...
T Consensus       125 P~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~--~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~  202 (227)
T 1eer_B          125 PVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQ--RVEILEGRTECVLSNLRGRTRYTFAVRARMA  202 (227)
T ss_dssp             CEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCC--EEEECTTCCEEEECCCCSSCEEEEEEEEEEC
T ss_pred             CcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEE--EEEEecCceEEEEcccCCCCeEEEEEEEeEC
Confidence            3357777774 88999988776532 23488999999977543 221  1244556789999999999999999999965


Q ss_pred             ----CccCcce--eeEEec
Q 004714          421 ----TTELGRC--EIWFST  433 (734)
Q Consensus       421 ----~~elg~~--E~k~~T  433 (734)
                          .|..|.|  ++.+.|
T Consensus       203 ~~~~~g~wS~WS~~~~~~t  221 (227)
T 1eer_B          203 EPSFGGFWSEWSEPVSLLT  221 (227)
T ss_dssp             TTTCCEECCCCCCCEEEEC
T ss_pred             CCCCCCcCCCCCCCEEEEC
Confidence                2444554  445555

>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}

Probab=96.08  E-value=0.033  Score=53.82  Aligned_cols=89  Identities=11%  Similarity=0.067  Sum_probs=60.0

Q ss_pred             CCcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCc-eeeecCCceeEeecCCcceeeeEEEEe
Q 004714          339 SNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPT-CTLFAPNTRFVVTGLCPATEYQFKVVS  417 (734)
Q Consensus       339 ~~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept-~~~~~p~~r~~vs~L~P~TEY~fkvvs  417 (734)
                      ...+++..|.+. -...+|.|.+...    ..+..|.|=||+....  .+-. -++....+++.|.+|.|.|+|+|+|-+
T Consensus       107 ~t~i~PP~v~v~-~~~~~i~V~~~~p----~~~l~Y~v~y~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Ycv~Vra  179 (206)
T 4doh_B          107 STILTRPGMEIT-KDGFHLVIELEDL----GPQFEFLVAYWRREPG--AEEHVKMVRSGGIPVHLETMEPGAAYCVKAQT  179 (206)
T ss_dssp             GCBCCCCCEEEE-EETTEEEEEECCC----CTTCEEEEEEEESSSS--CCCEEEEECCSSSEEEEEECCSSSCEEEEEEE
T ss_pred             hcccCCCeEEEE-eCCCEEEEEecCC----CCcEEEEEEEEEcCCC--ceeEEeEEccCCeEEEEeCCCCCCcEEEEEEE
Confidence            344555567776 5788999988743    4678999999887543  1111 223334678999999999999999999


Q ss_pred             ccCC-ccCc-ceeeEEecC
Q 004714          418 SNGT-TELG-RCEIWFSTG  434 (734)
Q Consensus       418 F~~~-~elg-~~E~k~~T~  434 (734)
                      ++.. ...| .++..|++-
T Consensus       180 ~~~~~~~~g~~S~~~C~~t  198 (206)
T 4doh_B          180 FVKAIGRYSAFSQTECVEV  198 (206)
T ss_dssp             EEGGGTEECCCCCCEEECC
T ss_pred             EecCCCCCCCCCCCEeEEc
Confidence            9853 1223 245566543

>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A

Probab=95.87  E-value=0.034  Score=55.49  Aligned_cols=77  Identities=21%  Similarity=0.257  Sum_probs=57.7

Q ss_pred             eEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          346 MVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      .+++.+++.++++|.+..... ....|.+|.+++++.... +.   ..........+.|.+|.|.+.|.|+|.+++..|.
T Consensus       201 ~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~~~~---~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~  277 (389)
T 2jll_A          201 GVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASEIWK---IVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQ  277 (389)
T ss_dssp             EEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCSCCE---EEECSTTCSEEEECSCCTTCEEEEEEEEEESSCB
T ss_pred             ceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCcccE---EeeccCCcceEEECCccCCCEEEEEEEEEcCCcc
Confidence            678888999999998875433 344688999998887654 32   1112234578999999999999999999998775


Q ss_pred             Cc
Q 004714          424 LG  425 (734)
Q Consensus       424 lg  425 (734)
                      -.
T Consensus       278 ~~  279 (389)
T 2jll_A          278 GD  279 (389)
T ss_dssp             CC
T ss_pred             CC
Confidence            33

>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*

Probab=95.86  E-value=0.03  Score=58.39  Aligned_cols=71  Identities=20%  Similarity=0.269  Sum_probs=52.8

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCC-------CCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEE
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSP-------GNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVV  416 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~-------~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvv  416 (734)
                      +..|+++.. .+||.|.+. .....       ..+.||+|-||+....  .+  ..+...++++.|.||.|.|+|+|||.
T Consensus       108 pP~v~~~~~-~~si~v~w~-P~~~~g~~~~~~~~~~~Y~v~y~~~~~~--~~--~~~~~~~~~~~i~~L~p~t~Y~~~V~  181 (414)
T 3se4_A          108 PPEVHLEAE-DKAIVIHIS-PGTKDSVMWALDGLSFTYSLVIWKNSSG--VE--ERIENIYSRHKIYKLSPETTYCLKVK  181 (414)
T ss_dssp             CCEEEEEEC-SSCEEEEEE-CSSSSCTTTGGGGSSCEEEEEEEETTTC--CE--EEEEEECSEEEECCCCTTCEEEEEEE
T ss_pred             CCeEEEEEc-CCEEEEEEE-cCCCCCceeeeecCcEEEEEEEEECCCC--ce--EEEecCCcEEEEcCCCCCCeEEEEEE
Confidence            335787655 579999888 43211       3578999999987653  11  22455788999999999999999999


Q ss_pred             eccC
Q 004714          417 SSNG  420 (734)
Q Consensus       417 sF~~  420 (734)
                      +|+.
T Consensus       182 A~n~  185 (414)
T 3se4_A          182 AALL  185 (414)
T ss_dssp             EECT
T ss_pred             EEec
Confidence            9995

>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}

Probab=95.52  E-value=0.028  Score=52.00  Aligned_cols=73  Identities=16%  Similarity=0.206  Sum_probs=50.6

Q ss_pred             EeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCC-CCCCCceee-ecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          351 DVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEG-FPARPTCTL-FAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       351 ~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~-y~~ept~~~-~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      .....+++|.+..... ....|.+|.+.+++.... +.....-+. ......+.|.+|.|.+.|.||+.+.|..|.
T Consensus       123 ~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~  198 (215)
T 3mtr_A          123 EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGL  198 (215)
T ss_dssp             EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCB
T ss_pred             EEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccccccccEEECCCCCCCEEEEEEEEEeCCcc
Confidence            4667788888765442 345689999999988664 221100000 112278999999999999999999988764

>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}

Probab=95.45  E-value=0.0088  Score=65.88  Aligned_cols=75  Identities=20%  Similarity=0.228  Sum_probs=55.4

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeec-CCcee--EeecCCcceeeeEEEEecc
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFA-PNTRF--VVTGLCPATEYQFKVVSSN  419 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~-p~~r~--~vs~L~P~TEY~fkvvsF~  419 (734)
                      +..++++.+++++|+|-.+........+.+|.|-||......-. -...+.. ..+++  .|.+|.|.|+|.|||-+++
T Consensus       390 P~nl~v~~~s~~sl~LsW~pP~~~~g~~l~YeV~Yr~~~~~~w~-~~~~~~~~~~~~~~v~l~~L~P~T~Y~~rVRA~~  467 (488)
T 2q7n_A          390 PTSLKVKDINSTVVTFSWYLPGNFTKINLLCQIEICKANSKKEV-RNATIRGAEDSTYHVAVDKLNPYTAYTFRVRCSS  467 (488)
T ss_dssp             CEEEEEEECSTTCEEEEEEEEEECSSSEEEEEEEEBCTTSCCEE-EEEEEECCEEEEEEEEECSCCSSCCBBCCEEEEE
T ss_pred             CeEEEEEecCCCEEEEEEeCCCCCCCcceEEEEEEEECCCCCce-EEEEEecCCCcEEEEEeCCCCCCceEEEEEEEEE
Confidence            34688999999999999887754456789999999987542100 0112221 24567  9999999999999999999

>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum}

Probab=95.09  E-value=0.11  Score=45.64  Aligned_cols=84  Identities=13%  Similarity=0.122  Sum_probs=54.4

Q ss_pred             eEEEEEe-eceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceee-ecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          346 MVKFEDV-RATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTL-FAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       346 ~~rFE~v-t~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~-~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      -+..... ..++|+|-+...    .++.||.|........ |.    .+- ....+.|..++|.|.|.|.|+|.+++..+
T Consensus        10 ~l~a~~~~~~~~v~LsW~~~----~~~~~Y~VyR~~~~~~~~~----~i~~~~~~tsy~d~~l~~g~~Y~Y~V~Avn~~g   81 (103)
T 3mpc_A           10 GLSAVLDSSGNTANLTWNAA----PGANSYNVKRSTKSGGPYT----TIATNITSTNYTDTGVATGTKYYYVVSAVSNGV   81 (103)
T ss_dssp             EEEEEECTTSCCEEEEEECC----TTCSEEEEEEESSTTCCCE----EEEEEECSSEEEETTCCTTCCCEEEEEEEETTE
T ss_pred             eeEEEEeCCCCEEEEEEECC----CCCCEEEEEEecCCCCCcE----EEeecCCCCEEEECCCCCCCEEEEEEEEEeCcC
Confidence            4666665 357888877763    3589999954433232 32    122 24678999999999999999999999554


Q ss_pred             cCcce-eeEEecCccc
Q 004714          423 ELGRC-EIWFSTGSSR  437 (734)
Q Consensus       423 elg~~-E~k~~T~s~e  437 (734)
                      +=..+ |+...|..++
T Consensus        82 eS~~S~~vs~~~~~~~   97 (103)
T 3mpc_A           82 ETLNSAEAILQYPKLE   97 (103)
T ss_dssp             ECCCCCCEECBCCCCC
T ss_pred             CcCCCccEEEECCccc
Confidence            43322 4444444333

>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A

Probab=95.01  E-value=0.049  Score=56.93  Aligned_cols=78  Identities=15%  Similarity=0.125  Sum_probs=49.9

Q ss_pred             EEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc-cC
Q 004714          347 VKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT-EL  424 (734)
Q Consensus       347 ~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~-el  424 (734)
                      +.+.. +.+++.|-...... ....+.+|.|=||+............+. +++.+.|.+|.|.|.|.|+|-+.+..+ ..
T Consensus       327 l~v~~-~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~~~~w~~~~~~~~~-~~~~~~l~~L~p~t~Y~~qVRa~~~~g~~~  404 (419)
T 2gys_A          327 LQVTK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKTETLQ-NAHSMALPALEPSTRYWARVRVRTSRTGYN  404 (419)
T ss_dssp             EEEC----CCCEEEEEC--------CEEEEEEEECSSSCSTTSCEEEEE-SCSEEECCCCCSSCCCEEEEEEEECCTTCC
T ss_pred             eEEEE-eCCeEEEEECCCcccccccceEEEEEEEcCCCCcceeeccccc-cccEEEeccCCCCCeEEEEEEEEEcCCCCC
Confidence            44443 46788887766542 2236889999999875432222233333 789999999999999999999998863 34


Q ss_pred             cc
Q 004714          425 GR  426 (734)
Q Consensus       425 g~  426 (734)
                      |.
T Consensus       405 G~  406 (419)
T 2gys_A          405 GI  406 (419)
T ss_dssp             BC
T ss_pred             Cc
Confidence            53

>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}

Probab=94.98  E-value=0.031  Score=53.84  Aligned_cols=77  Identities=23%  Similarity=0.255  Sum_probs=56.5

Q ss_pred             ceEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          345 NMVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ..+++.++++++++|....... ....|.+|.+-++..... +..    .-......+.|.+|.|.++|.||+.+++..|
T Consensus       203 ~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~~~w~~----~~~~~~~~~~i~~l~~~~~y~~~~~A~N~~G  278 (305)
T 2nzi_A          203 RGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTAERWLR----VGQARETRYTVINLFGKTSYQFRVIAENKFG  278 (305)
T ss_dssp             EEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTSCCEEE----EEEESSSEEEECSCCSSCEEEEEEEEEETTE
T ss_pred             CCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCCCccEE----CccccCceEEecCCCCCCeEEEEEEEEeCCc
Confidence            3577888999999998876432 344689999988776443 211    1122378899999999999999999998876


Q ss_pred             cCc
Q 004714          423 ELG  425 (734)
Q Consensus       423 elg  425 (734)
                      .-.
T Consensus       279 ~~~  281 (305)
T 2nzi_A          279 LSK  281 (305)
T ss_dssp             ECC
T ss_pred             ccC
Confidence            433

>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*

Probab=94.93  E-value=0.016  Score=60.47  Aligned_cols=78  Identities=14%  Similarity=0.244  Sum_probs=47.4

Q ss_pred             CcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceee-ecCCceeEeecCCcceeeeEEEEe
Q 004714          340 NVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTL-FAPNTRFVVTGLCPATEYQFKVVS  417 (734)
Q Consensus       340 ~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~-~~p~~r~~vs~L~P~TEY~fkvvs  417 (734)
                      .|+++--|+++.+. ++++|-.+.......+|. |.+.|+..... ....+.|.- ......|.+.+|.|.+.|.|||.+
T Consensus         7 ~l~~P~nv~~~~~~-~~~~L~W~p~~~~~~~i~-Y~V~y~~~~~~~W~~~~~c~~~~~~~~~~t~~~l~~~~~Y~~rV~A   84 (414)
T 3se4_A            7 NLKSPQKVEVDIID-DNFILRWNRSDESVGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRA   84 (414)
T ss_dssp             ----CCCCCEEEET-TEEEEC----------CE-EEEEEEESSCCCCEEEEEEEEESCSCEECCSSCCCTTSCEEEEEEE
T ss_pred             CCCCCceeEEEEEC-CceEEEEcCCCCCCCCeE-EEEEEEECCCCCcEECcCccCCCCCEEECCcccccCCCcEEEEEEE
Confidence            56777788898875 556555554443345688 99999986443 333345543 345566777889999999999999


Q ss_pred             cc
Q 004714          418 SN  419 (734)
Q Consensus       418 F~  419 (734)
                      ++
T Consensus        85 ~n   86 (414)
T 3se4_A           85 EK   86 (414)
T ss_dssp             EE
T ss_pred             ee
Confidence            99

>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}

Probab=94.79  E-value=0.012  Score=57.19  Aligned_cols=57  Identities=21%  Similarity=0.186  Sum_probs=31.7

Q ss_pred             CcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccCcceee
Q 004714          370 NIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEI  429 (734)
Q Consensus       370 ~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg~~E~  429 (734)
                      .|++|.|.++.....   .-........+.|.|+||.|.|+|.|||.+++..|.-..++.
T Consensus        21 ~Vt~Y~~~~~~~~~~---~~~~~~~~~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~   77 (232)
T 4go6_B           21 MVTHYFLPPDDAVPS---DDDLGTVPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEI   77 (232)
T ss_dssp             EECEEECCCC---------------------CEEECCTTCEEEEEEEEEETTEEEEECCC
T ss_pred             EEEEEEEEeeCCCCC---cEEEEECCCccEEEeCCCCCCCEEEEEEEEEeCCCccccccc
Confidence            477888876544332   112223445678999999999999999999998875443443

>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}

Probab=94.59  E-value=0.19  Score=49.02  Aligned_cols=86  Identities=21%  Similarity=0.182  Sum_probs=57.5

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCC---CCC----------cceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcce
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPS---PGN----------IISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPAT  409 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s---~~~----------i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~T  409 (734)
                      .+..|.++ ....+|.|.+......   .++          ...|.|=||+......   . .....+..+.|.+|.|.|
T Consensus       110 gPP~v~v~-~~~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~~---~-~~~~~~~~~~l~~L~p~t  184 (221)
T 4doh_R          110 GPPEVALT-TDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNRT---W-SQCVTNHTLVLTWLEPNT  184 (221)
T ss_dssp             CCCEEEEE-CCSSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTEE---E-EEEECSSEEEECSCCTTC
T ss_pred             CCCEEEEE-ECCCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCcE---E-EEeecCcEEEEecCCCCC
Confidence            33458877 6788999988765421   111          3589999998755411   1 122356789999999999


Q ss_pred             eeeEEEEeccCC-ccCcc-eeeEEec
Q 004714          410 EYQFKVVSSNGT-TELGR-CEIWFST  433 (734)
Q Consensus       410 EY~fkvvsF~~~-~elg~-~E~k~~T  433 (734)
                      +|+|+|-+++.. ...|. ++..|++
T Consensus       185 ~Ycv~V~a~~~~~~~~g~~S~~~c~~  210 (221)
T 4doh_R          185 LYCVHVESFVPGPPRRAQPSEKQCAR  210 (221)
T ss_dssp             EEEEEEEEECSSSCCCCCCCEEEEEE
T ss_pred             cEEEEEEEEEcCCCCCCCCCCCEeEe
Confidence            999999999752 23443 4556554

>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A

Probab=94.52  E-value=0.13  Score=48.01  Aligned_cols=76  Identities=13%  Similarity=0.021  Sum_probs=51.2

Q ss_pred             EEEEEe-eceeEEEEeCcCCCCCCCcceEEEEeeecCCC--CCCCC--ceee--ecCCceeEeecCCcceeeeEEEEecc
Q 004714          347 VKFEDV-RATSLTVVLGSEDPSPGNIISYTLWHRRAHEG--FPARP--TCTL--FAPNTRFVVTGLCPATEYQFKVVSSN  419 (734)
Q Consensus       347 ~rFE~v-t~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~--y~~ep--t~~~--~~p~~r~~vs~L~P~TEY~fkvvsF~  419 (734)
                      ++.+.. +.++|++-...... .....+|.|+||+....  +..+.  .|..  -.-..+|.+.+|.|.+.|.|+|.+++
T Consensus        11 l~c~~~~~~~~~~~~W~p~~~-~~~~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~~~V~A~N   89 (215)
T 1cd9_B           11 LSCLMHLTTNSLVCQWEPGPE-THLPTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQYMAIWVQAEN   89 (215)
T ss_dssp             EEEEEETTTTEEEEEEECCSC-CSSCCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSCEEEEEEEEE
T ss_pred             eeeecCCCcccEEEEecCCCC-CCCceeEEEEEEecCCcccccccccccCCCCCCCcEEEECCcccccceEEEEEEEEEC
Confidence            555544 68899998886543 22356899999987543  11111  1111  11235788899999999999999999


Q ss_pred             CCcc
Q 004714          420 GTTE  423 (734)
Q Consensus       420 ~~~e  423 (734)
                      ..|.
T Consensus        90 ~~G~   93 (215)
T 1cd9_B           90 MLGS   93 (215)
T ss_dssp             TTEE
T ss_pred             CCCC
Confidence            8875

>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A

Probab=94.35  E-value=0.088  Score=51.57  Aligned_cols=76  Identities=20%  Similarity=0.242  Sum_probs=54.5

Q ss_pred             EEEEeece----eEEEEeCcCCCC---CC-CcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 004714          348 KFEDVRAT----SLTVVLGSEDPS---PG-NIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  418 (734)
Q Consensus       348 rFE~vt~t----Sv~vvL~~~~~s---~~-~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  418 (734)
                      +++.++.+    +|+|-.+.....   .. .+..|.|-||..... +..    +....++++.|.+|.|+|+|.|+|=+.
T Consensus       140 ~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~----~~~~~~~~~~l~~L~p~t~Y~vqVRa~  215 (236)
T 1axi_B          140 TLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKM----MDPILTTSVPVYSLKVDKEYEVRVRSK  215 (236)
T ss_dssp             EECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEE----CCCBSSSEEEEEEEETTSCEEEEEEEE
T ss_pred             EEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEE----EeccCCCEEEEeccCCCCEEEEEEEEE
Confidence            56677554    488888776532   11 478999999998654 321    223457899999999999999999998


Q ss_pred             cCCc-cCcce
Q 004714          419 NGTT-ELGRC  427 (734)
Q Consensus       419 ~~~~-elg~~  427 (734)
                      +..| .+|.|
T Consensus       216 ~~~gg~ws~W  225 (236)
T 1axi_B          216 QRNSGNYGEF  225 (236)
T ss_dssp             ETTSSCCCCC
T ss_pred             ECCCCCcCCC
Confidence            8764 45554

>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}

Probab=93.67  E-value=0.16  Score=48.26  Aligned_cols=71  Identities=13%  Similarity=-0.004  Sum_probs=43.8

Q ss_pred             EEEEEe-eceeEEEEeCcCCCCCCCcceEEEEeeecCC-C-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          347 VKFEDV-RATSLTVVLGSEDPSPGNIISYTLWHRRAHE-G-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       347 ~rFE~v-t~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~-~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      +.++.+ .+++|.|-...... ...+..|.|=||.... . +..  .-+......++.|.+|.|+|+|.|+|-+-+.
T Consensus       116 l~v~~~~~~~~l~l~W~~P~~-~~~~l~yev~y~~~~~~~~w~~--~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~  189 (206)
T 3v6o_A          116 VKAEITINIGLLKISWEKPVF-PENNLQFQIRYGLSGKEVQWKM--YEVYDAKSKSVSLPVPDLCAVYAVQVRCKRL  189 (206)
T ss_dssp             CEEEEETTTTEEEEEC---------CEEEEEEEEESSSSCCCEE--EEECC---CEEEECCSCTTSCEEEEEEEEET
T ss_pred             eEeEEecCCCeEEEEECCCCC-CCCcEEEEEEEEECCCCCceEE--EecccCcceeEEeecCCCCCEEEEEEEEecC
Confidence            555554 58899998876543 3356899999998753 1 211  1111223357999999999999999998774

>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}

Probab=93.43  E-value=0.086  Score=53.30  Aligned_cols=84  Identities=12%  Similarity=0.203  Sum_probs=45.0

Q ss_pred             CcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceee-ecCCceeEeecCCcceeeeEEEEe
Q 004714          340 NVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTL-FAPNTRFVVTGLCPATEYQFKVVS  417 (734)
Q Consensus       340 ~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~-~~p~~r~~vs~L~P~TEY~fkvvs  417 (734)
                      .|+++--|++..+ .++++|-.+.......+|. |.+-|+..... ...-+.|.- ...+-.|...+|.|.+.|.|||.+
T Consensus         3 ~l~~P~nv~~~~~-n~~~iL~W~pp~~~~~~v~-Y~V~y~~~~~~~W~~~~~c~~~~~~~c~lt~~~l~~~~~Y~~rV~A   80 (306)
T 3s98_A            3 PLKSPQKVEVDII-DDNFILRWNRSDESVGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRA   80 (306)
T ss_dssp             -----CCCEEEEE-TTEEEEECC--------CE-EEEEEEESSCSSCEECTTCSSBSSSEEECCC---CTTSCEEEEEEE
T ss_pred             CCCCCcEeEEEEE-CCeEEEEEcCCCCCCCCeE-EEEEEEECCCCCcEECCCccCCCCCEEEccccccCCCCcEEEEEEE
Confidence            3566777888866 4556665655543446676 99999986543 332244432 222223444567899999999999


Q ss_pred             ccCCccCcce
Q 004714          418 SNGTTELGRC  427 (734)
Q Consensus       418 F~~~~elg~~  427 (734)
                      ++  +..|.|
T Consensus        81 ~n--~~~S~~   88 (306)
T 3s98_A           81 EK--ENTSSW   88 (306)
T ss_dssp             EC--SSCEEE
T ss_pred             Ee--CCcCCC
Confidence            99  446654

>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A

Probab=93.27  E-value=0.043  Score=53.96  Aligned_cols=106  Identities=19%  Similarity=0.411  Sum_probs=62.2

Q ss_pred             eeeeeccccCCC-CCccEEecCCCCCCCCCcccchhhhhhhhhccccccccC-CCcc---ccceeEEeccCCCccchhHH
Q 004714          161 SCCICRKYDDNK-DPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKD-RCYS---GLDGSFYCISCRKVNDLLGC  235 (734)
Q Consensus       161 sC~IC~kfD~nk-d~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~-g~~~---~lD~~f~C~~Cgk~sdLlg~  235 (734)
                      .|.||.+-.++. ...-||.|+        .|..|-|..|.      |+-.. ....   .-+..|+|..|-....-.  
T Consensus         4 ~CpiC~k~Y~~~~~~~~MIqCd--------~C~~W~H~~Cv------gi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~~--   67 (183)
T 3lqh_A            4 FCPLCDKCYDDDDYESKMMQCG--------KCDRWVHSKCE------NLSDEMYEILSNLPESVAYTCVNCTERHPAE--   67 (183)
T ss_dssp             BCTTTCCBCTTCCTTCCEEECT--------TTCCEEEGGGS------SCCHHHHHHHHHSHHHHCCCCTTTCCSSSCH--
T ss_pred             cCCCCcCccCCcccCCCeEECC--------CCCcccchhcc------ccCHHHHHHhhcCCCCCeeECcCCCCCCCHH--
Confidence            488997754443 478899999        99999999997      22110 0000   012489999998887753  


Q ss_pred             HHHHHHHhhccccchhhhhhhh---------------------chhhhccccHHHHHHHHHHHHHHHHhhh
Q 004714          236 WKKQLVVAKNTRRVDILCYRLS---------------------LGQKLVNATEKYKNLSKIVDDAVKMLED  285 (734)
Q Consensus       236 w~Kql~~ake~rrvD~Lc~rL~---------------------l~~kll~GS~~~k~L~~~ve~A~~KLe~  285 (734)
                      |++-|. .+..+.+..|...|.                     +..||=.|  +|+.+.++++++..-+.+
T Consensus        68 ~~~~~~-~el~~~l~~vl~~L~~~~~s~~~~~y~~k~PmDL~~i~kKl~~~--~Y~s~~eF~~Dv~lIf~n  135 (183)
T 3lqh_A           68 WRLALE-KELQISLKQVLTALLNSRTTSHLLRYRQQQPLDLEGVKRKMDQG--NYTSVLEFSDDIVKIIQA  135 (183)
T ss_dssp             HHHHHH-HHHHHHHHHHHHHHHTCHHHHHHHTCCC--CCSHHHHHHHHHTT--CCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHH-HHHHHHHHHHHHHHHhccccHhhhhhhhcCCccHHHHHHHHhcC--CCCCHHHHHHHHHHHHHH
Confidence            665443 121222222222111                     11111122  488888888888888877

>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}

Probab=93.20  E-value=0.3  Score=46.41  Aligned_cols=86  Identities=17%  Similarity=0.145  Sum_probs=62.0

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          341 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       341 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      ||++--|+|+-+.. ++++-.+......+++. |.+-|+.-+ .+.  |.|.-. ..++..|++|.|-+.|.|||.++++
T Consensus         2 lp~P~nv~~~s~n~-~~iL~W~pp~~~~~~v~-Y~V~y~~~~-~w~--~~c~~~-~~~~c~lt~l~~~~~Y~~rV~A~~~   75 (201)
T 3lqm_A            2 VPPPENVRMNSVNF-KNILQWESPAFAKGQLT-FTAQYLSYR-IFQ--DKCMQT-TLTECDFSSLSKYGDHTLRVRAEFA   75 (201)
T ss_dssp             CCCCEEEEEEEETT-EEEEEEECCCCSSSCCE-EEEEEEETT-EEE--EEEEEE-SSSEEECTTSCSSSCEEEEEEEEET
T ss_pred             CCCCcccEEEEECC-ceEEEECCCCCCCCCeE-EEEEEEECC-Ccc--cCcCcc-CCCEEECCCCccCCCEEEEEEEecC
Confidence            56777889887665 45566666654555776 999998752 233  455543 6789999999999999999999998


Q ss_pred             CccCcceeeEEe
Q 004714          421 TTELGRCEIWFS  432 (734)
Q Consensus       421 ~~elg~~E~k~~  432 (734)
                      .+.-.-.|.+|.
T Consensus        76 ~~~S~~s~~~f~   87 (201)
T 3lqm_A           76 DEHSDWVQITFS   87 (201)
T ss_dssp             TEECCCEEEEEC
T ss_pred             CCcCcceeeeee
Confidence            865444565543

>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1

Probab=92.81  E-value=0.57  Score=46.36  Aligned_cols=77  Identities=12%  Similarity=0.016  Sum_probs=50.1

Q ss_pred             eEEEEEe-eceeEEEEeCcCCCCCCCcceEEEEeeecCCC--CCCCCc--eeeecCCceeEe--ecCCcceeeeEEEEec
Q 004714          346 MVKFEDV-RATSLTVVLGSEDPSPGNIISYTLWHRRAHEG--FPARPT--CTLFAPNTRFVV--TGLCPATEYQFKVVSS  418 (734)
Q Consensus       346 ~~rFE~v-t~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~--y~~ept--~~~~~p~~r~~v--s~L~P~TEY~fkvvsF  418 (734)
                      .++.+.. +++++++-....... ....+|.|+||.....  +.....  |......+...|  .+|.|.+.|.|+|.++
T Consensus       104 ~l~c~~~~~~~~~~~~W~~~~~~-~~~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~f~V~A~  182 (313)
T 2d9q_B          104 NLSCLMNLTTSSLICQWEPGPET-HLPTSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHCSIPRKHLLLYQNMGIWVQAE  182 (313)
T ss_dssp             EEEEEEETTTTEEEEEEECCSCC-SSCCEEEEEEEECCTTSCSCCCCEEEECCCTTCSEEEEEGGGCCSSSCEEEEEEEE
T ss_pred             cceeeECCCCccEEEEecCCCCC-CCceeEEEEEEecCCCcccCCcccccCCCCCCCcEEEECccccccceeEEEEEEEE
Confidence            4556666 578999988765432 2256799999987643  211111  111122333444  5699999999999999


Q ss_pred             cCCcc
Q 004714          419 NGTTE  423 (734)
Q Consensus       419 ~~~~e  423 (734)
                      +..|.
T Consensus       183 N~~G~  187 (313)
T 2d9q_B          183 NALGT  187 (313)
T ss_dssp             ETTEE
T ss_pred             CCCCC
Confidence            98876

>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A

Probab=92.74  E-value=0.21  Score=46.53  Aligned_cols=78  Identities=15%  Similarity=0.068  Sum_probs=52.3

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCcee-eecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          346 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCT-LFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~-~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      -|+...+..++|++-....... ...++|.|.||..... ...-|.++ .....-+|.+.+|.|-++|.|+|.+.+..|.
T Consensus         9 nl~c~~~~~~~~~c~W~p~~~~-~~~~~Y~l~y~~~~~~~~~~c~~~~~~~~~~c~~~~~~l~~~~~Y~~~V~A~N~~G~   87 (210)
T 3n06_B            9 IFKCRSPNKETFTCWWRPGTDG-GLPTNYSLTYHREGETLMHECPDYITGGPNSCHFGKQYTSMWRTYIMMVNATNQMGS   87 (210)
T ss_dssp             EEEEEBSSSSCEEEEEECCSSS-CCCSEEEEEEEETTCCCCEECSCSSTTCTTEEEECGGGCCSSSCEEEEEEEEETTEE
T ss_pred             EeEEEeCCCCeEEEEECCCCCC-CCCceEEEEEEECCCCccccCCCCCCCCCeEEEeCCCCcccceeEEEEEEEEcCCCC
Confidence            3777888899999988765432 2257999999986532 10001111 0112345667889999999999999988775


Q ss_pred             C
Q 004714          424 L  424 (734)
Q Consensus       424 l  424 (734)
                      -
T Consensus        88 ~   88 (210)
T 3n06_B           88 S   88 (210)
T ss_dssp             E
T ss_pred             e
Confidence            4

>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}

Probab=92.63  E-value=0.051  Score=52.88  Aligned_cols=73  Identities=14%  Similarity=0.175  Sum_probs=34.3

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCC-----CC-----C--cceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceee
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPS-----PG-----N--IISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEY  411 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s-----~~-----~--i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY  411 (734)
                      +..|.++... .||.|.+......     .+     +  ...|+|.||+....  . -..++...++.+.|.||.|.|+|
T Consensus       110 PP~v~v~~~~-~si~V~~~~P~~~~~~~ng~~~~~~~~~~l~Y~v~y~~~~~~--~-~~~~~~~~~~~~~i~~L~p~t~Y  185 (211)
T 3g9v_A          110 PPVMNITQVN-GSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLE--K-EQKVYEGAHRAVEIEALTPHSSY  185 (211)
T ss_dssp             CCEEECC------CCCEEECCCCGGGGCSSCSSCHHHHTTCEEEEEEC---------CEEEEEESSCCCC----------
T ss_pred             CCEEEEEEcC-CEEEEEEECCCCccccCCCceeeehhcceeEEEEEEEECCCc--c-EEEEEecCCcEEEEecCCCCCeE
Confidence            3356666554 4788877666531     11     1  35699999986442  1 12244467889999999999999


Q ss_pred             eEEEEeccC
Q 004714          412 QFKVVSSNG  420 (734)
Q Consensus       412 ~fkvvsF~~  420 (734)
                      +|+|-+|..
T Consensus       186 cv~V~a~~~  194 (211)
T 3g9v_A          186 CVVAEIYQP  194 (211)
T ss_dssp             CEEEEEEET
T ss_pred             EEEEEEEeC
Confidence            999999863

>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}

Probab=92.59  E-value=0.082  Score=58.47  Aligned_cols=81  Identities=14%  Similarity=0.148  Sum_probs=56.0

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeec---CCceeEeecCCcceeeeEEEEeccC
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFA---PNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~---p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      +..++++.+++++|.|-..........+.+|.|=||........ -+..+..   ....+.|.+|.|.|+|.|||-++ .
T Consensus       385 P~nl~v~~~~stsl~LsW~~P~~~~~~~L~YeVrYr~~~~~~~~-~~vsv~~~~~~~~s~~l~~L~PgT~Y~vrVRA~-~  462 (483)
T 3e0g_A          385 PTSFKVKDINSTAVKLSWHLPGNFAKINFLCEIEIKKSNSVQEQ-RNVTIQGVENSSYLVALDKLNPYTLYTFRIRCS-T  462 (483)
T ss_dssp             CEEEEECCSSSSSCCEEEECCSCCTTSBCCCEEEEECSSSCCCE-EECCCBCCSSSBCCCCCCSCCSSSSCEEEEECC-C
T ss_pred             CeeeEEEEecCCeEEEEECCCCCCCCceEEEEEEEEECCCCCce-EEEEEeccCCceeEEEEeccCCCcEEEEEEEEe-e
Confidence            34578888899999999887765455678999999987653100 0111211   12257899999999999999999 4


Q ss_pred             CccCcce
Q 004714          421 TTELGRC  427 (734)
Q Consensus       421 ~~elg~~  427 (734)
                      . .+|.|
T Consensus       463 ~-g~g~W  468 (483)
T 3e0g_A          463 E-TFWKW  468 (483)
T ss_dssp             S-SCCCC
T ss_pred             C-CCCCc
Confidence            3 34433

>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*

Probab=91.40  E-value=0.063  Score=44.83  Aligned_cols=46  Identities=30%  Similarity=0.640  Sum_probs=33.3

Q ss_pred             eeeeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccccceeEEeccCC
Q 004714          162 CCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCR  227 (734)
Q Consensus       162 C~IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~Cg  227 (734)
                      |.+|.+.++   +..||.||        .|..|-|+.|.      |+...   ...++.|+|..|-
T Consensus        21 C~~C~~~~~---~~~mi~CD--------~C~~wfH~~Cv------~~~~~---~~~~~~w~C~~C~   66 (75)
T 2k16_A           21 CPGCNKPDD---GSPMIGCD--------DCDDWYHWPCV------GIMAA---PPEEMQWFCPKCA   66 (75)
T ss_dssp             BTTTTBCCS---SCCEEECS--------SSSSEEEHHHH------TCSSC---CCSSSCCCCTTTH
T ss_pred             CCCCCCCCC---CCCEEEcC--------CCCcccccccC------CCCcc---CCCCCCEEChhcc
Confidence            557877764   56899999        89999999995      22211   1124789999994

>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}

Probab=89.92  E-value=0.66  Score=45.02  Aligned_cols=92  Identities=11%  Similarity=0.022  Sum_probs=60.2

Q ss_pred             CCcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeec--CCcceeeeEEE
Q 004714          339 SNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTG--LCPATEYQFKV  415 (734)
Q Consensus       339 ~~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~--L~P~TEY~fkv  415 (734)
                      ..|+++.-|+|+-+.... ++-.+....+..++..|.+.|+..... +...|.|.-.. .+..-|++  |.|-+.|.|||
T Consensus         6 ~~lp~P~nv~~~s~n~~~-iL~W~p~~~~~~~~~~Y~Vqy~~~~~~~W~~~~~C~~i~-~~~Cdlt~~~~~~~~~Y~~RV   83 (211)
T 3g9v_A            6 HESLKPQRVQFQSRNFHN-ILQWQPGRALTGNSSVYFVQYKIYGQRQWKNKEDCWGTQ-ELSCDLTSETSDIQEPYYGRV   83 (211)
T ss_dssp             ---CCCEEEEEEEETTEE-EEEEECCCC---CCCEEEEEEEETTCSSCEEEEEEEEEC-CSEEECTGGGCSTTSCEEEEE
T ss_pred             ccCCCCceeEEEEEcCce-EEEECCCCCCCCCCeEEEEEEEECCCCceEECccCCCCC-CCEECCCCcccccCccEEEEE
Confidence            357788899997766655 477777665556689999999876543 44445665543 45666664  47999999999


Q ss_pred             EeccCCccCcceeeEEe
Q 004714          416 VSSNGTTELGRCEIWFS  432 (734)
Q Consensus       416 vsF~~~~elg~~E~k~~  432 (734)
                      .++++.+.-.-.|..-|
T Consensus        84 ~A~~~~~~S~ws~~~~f  100 (211)
T 3g9v_A           84 RAASAGSYSEWSMTPRF  100 (211)
T ss_dssp             EEEETTEECCCEECCCB
T ss_pred             EEECCCCcCCCEecCcc
Confidence            99997665444455433

>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*

Probab=89.20  E-value=1.8  Score=40.78  Aligned_cols=71  Identities=10%  Similarity=0.134  Sum_probs=52.1

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      ..+.++.+....|.|-.+...  ......|.|=||..... ..    -+.+...+++.|.+|.|.|+|.|+|=+=...
T Consensus       103 ~~l~~~~~~~~~l~l~W~~p~--~~~~l~yev~y~~~~~~~w~----~~~~~~~~~~~l~~l~p~~~Y~vqVR~~~~~  174 (199)
T 2b5i_C          103 ENLTLHKLSESQLELNWNNRF--LNHCLEHLVQYRTDWDHSWT----EQSVDYRHKFSLPSVDGQKRYTFRVRSRFNP  174 (199)
T ss_dssp             EEEEEEEEETTEEEEEEECSS--CSTTCEEEEEEEETTCSSCE----EEEECSSCEEEECSCCTTSCEEEEEEEECCS
T ss_pred             cEEEEEECCCCCEEEEECCCC--CCCceEEEEEEeecCCcccE----EEeccCceEEEecCCCCCcEEEEEEEEeccC
Confidence            357888887778888887764  23445899999986553 21    1334456899999999999999999886643

>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A

Probab=88.90  E-value=1.3  Score=46.17  Aligned_cols=73  Identities=10%  Similarity=0.173  Sum_probs=48.4

Q ss_pred             eEEEEEeeceeEEEEeCcCCCC------CCCcceEEEEeeecCCCCCCCCceeeecCCceeEee--cCCcceeeeEEEEe
Q 004714          346 MVKFEDVRATSLTVVLGSEDPS------PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT--GLCPATEYQFKVVS  417 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~s------~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs--~L~P~TEY~fkvvs  417 (734)
                      -+.++... ..|.|-.....+.      ......|.|.||...+.+....+  +....+.+.+.  +|.|.|+|.|||.+
T Consensus       114 ~l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~~~w~~~~~--~~~~~~~~~~~~~~L~p~~~Y~~rVra  190 (419)
T 2gys_A          114 DLQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDSWEDAAI--LLSNTSQATLGPEHLMPSSTYVARVRT  190 (419)
T ss_dssp             EEEEEEET-TEEEEEEECCC-----CCSCGGGEEEEEEEEETTSCSTTCEE--EEESSSEEEECTTTCCTTCEEEEEEEE
T ss_pred             ceEEEecC-CeEEEEECCCccccccchhccCceEEEEEEccCCCChhheee--ecccceEEEechhhcCCCCeEEEEEEE
Confidence            55666655 5777776665431      13468899999998633433322  33334555555  99999999999999


Q ss_pred             ccCC
Q 004714          418 SNGT  421 (734)
Q Consensus       418 F~~~  421 (734)
                      -+..
T Consensus       191 ~~~~  194 (419)
T 2gys_A          191 RLAP  194 (419)
T ss_dssp             EECT
T ss_pred             ecCC
Confidence            9864

>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*

Probab=86.90  E-value=0.35  Score=50.59  Aligned_cols=70  Identities=11%  Similarity=0.107  Sum_probs=30.7

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCC-CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeec-CCcceeeeEEEEecc
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPS-PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTG-LCPATEYQFKVVSSN  419 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~-L~P~TEY~fkvvsF~  419 (734)
                      +..++++.++++++.|-....... ...+.+|.|=||+....+....      ..+++.|.+ |.|.|.|.|||-+-.
T Consensus       241 P~~l~v~~~~~~~l~l~W~~P~~~~~~~~l~Yev~y~~~~~~w~~~~------~~~~~~l~~~L~p~t~Y~~qVRa~~  312 (380)
T 3lb6_C          241 PVYLTFTRESSCEIKLKWSIPLGPIPARCFDYEIEIREDDTTLVTAT------VENETYTLKTTNETRQLCFVVRSKV  312 (380)
T ss_dssp             CEEEEEC-------CEEEECCSSSCCSTTEEEEECC--------CCE------ESSSCC------------CCEEEEE
T ss_pred             CceEEEEEcCCCeEEEEECCCCCCCCcceEEEEEEEEeCCCCceEec------ccceEEEeCccCCCcEEEEEEEEEE
Confidence            336788888889999988876542 4578999999998532232211      134688999 999999999998864

>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2

Probab=86.68  E-value=0.15  Score=41.24  Aligned_cols=48  Identities=23%  Similarity=0.529  Sum_probs=32.5

Q ss_pred             eeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccccceeEEeccCCCc
Q 004714          164 ICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKV  229 (734)
Q Consensus       164 IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~Cgk~  229 (734)
                      +|.+-+++  .-.||.|+        .|..|-|+.|+      |+...  ....-..|+|..|-.+
T Consensus        11 ~C~~~~~~--~~~mI~Cd--------~C~~WfH~~Cv------gl~~~--~~~~~~~~~C~~C~~k   58 (64)
T 1we9_A           11 ACGESYAA--DEFWICCD--------LCEMWFHGKCV------KITPA--RAEHIKQYKCPSCSNK   58 (64)
T ss_dssp             SSCCCCCS--SSCEEECS--------SSCCEEETTTT------TCCTT--GGGGCSSCCCHHHHTT
T ss_pred             CCCCccCC--CCCEEEcc--------CCCCCCCcccc------CcChh--HhcCCCcEECCCCcCc
Confidence            78776432  35899999        99999999997      33211  0112258999999543

>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1

Probab=86.38  E-value=2.2  Score=42.42  Aligned_cols=71  Identities=10%  Similarity=0.134  Sum_probs=52.5

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      ..+.++.+....|.|-.+...+  .....|.|=||..... ..    .+.+...++|.|.+|.|.|+|.|||=+=...
T Consensus       141 ~nl~v~~~~~~~l~l~W~~P~~--~~~L~Yevry~~~~~~~W~----~~~~~~~~~~~l~~L~p~~~Y~vqVR~k~~~  212 (247)
T 2erj_C          141 ENLTLHKLSESQLELNWNNRFL--NHCLEHLVQYRTDWDHSWT----EQSVDYRHKFSLPSVDGQKRYTFRVRSRFNP  212 (247)
T ss_dssp             EEEEEEESSSSCEEEEEECSSC--CTTEEEEEEEECSSCSSCE----EEEECSSCEEEESCCCTTSCEEEEEEEEECS
T ss_pred             CeEEEEECCCCcEEEEECCCCC--CCcEEEEEEEeeCCCCCCE----EEecCCceEEEecCCCCCCEEEEEEEEEeCC
Confidence            3577888877888888877643  3456899999986553 21    1334457899999999999999999886643

>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*

Probab=85.73  E-value=0.26  Score=38.77  Aligned_cols=50  Identities=26%  Similarity=0.748  Sum_probs=36.1

Q ss_pred             CceeeeeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccccceeEEeccC
Q 004714          159 RCSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISC  226 (734)
Q Consensus       159 ~CsC~IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~C  226 (734)
                      -|.|++|.+-++  +.-.||.|+     .  .|.-|-|+.|+      |+...   ...+..|+|..|
T Consensus         2 ~c~cc~C~~p~~--~~~~mI~Cd-----~--~C~~WfH~~Cv------gl~~~---~~~~~~~~C~~C   51 (52)
T 2kgg_A            2 VCAAQNCQRPCK--DKVDWVQCD-----G--GCDEWFHQVCV------GVSPE---MAENEDYICINC   51 (52)
T ss_dssp             CCSCTTCCCCCC--TTCCEEECT-----T--TTCCEEETTTT------TCCHH---HHHHSCCCCSCC
T ss_pred             cccCCCCcCccC--CCCcEEEeC-----C--CCCccCccccc------CCCcc---ccCCCCEECCCC
Confidence            489999988663  357899998     2  79999999996      22211   112367999888

>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*

Probab=84.69  E-value=2  Score=42.69  Aligned_cols=82  Identities=7%  Similarity=-0.057  Sum_probs=51.5

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCC-CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 004714          341 VIVPNMVKFEDVRATSLTVVLGSEDPS-PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  419 (734)
Q Consensus       341 l~~~~~~rFE~vt~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  419 (734)
                      |+++--|+++..++++|+|-.+..... ...+.||.+-++....        ... +...+.+.+|.|.+.|.|||.+-.
T Consensus         4 ~~pP~nl~~~~~~~~~v~l~W~pP~~~~~~~~~~Y~v~~~~~~~--------~~~-~~~~~~~~~~~~~~~y~~~V~a~~   74 (314)
T 3bpo_C            4 QPPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQD--------KKI-APETRRSIEVPLNERICLQVGSQC   74 (314)
T ss_dssp             CCCCEEEEEEEETTTEEEEEEECCSSCCCSSCCCEEECCC--CC--------CEE-ESSSEEEEECCCSSCEEEEEEECC
T ss_pred             CCCCcceEEEeCCceEEEEEEcCCCCCCCCceEEEEEEecccCc--------eEe-ccccEEEEEEcCCCcEEEEEEEEe
Confidence            456678999999999999998875432 4557788876643211        111 234567899999999999999977


Q ss_pred             CCccCcceeeEE
Q 004714          420 GTTELGRCEIWF  431 (734)
Q Consensus       420 ~~~elg~~E~k~  431 (734)
                      +.+.+|.+....
T Consensus        75 ~~~~~g~~s~~~   86 (314)
T 3bpo_C           75 STNESEKPSILV   86 (314)
T ss_dssp             ---------CCE
T ss_pred             cCCCCCCCCcCe
Confidence            677777654433

>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2

Probab=83.80  E-value=0.24  Score=41.24  Aligned_cols=46  Identities=33%  Similarity=0.694  Sum_probs=31.3

Q ss_pred             eeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccccceeEEeccCCC
Q 004714          164 ICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRK  228 (734)
Q Consensus       164 IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~Cgk  228 (734)
                      ||.+-++  ++-.||.|+        .|..|-|+.|.=-...         ..+...|+|..|-.
T Consensus        20 ~C~~~~~--~g~~mI~Cd--------~C~~W~H~~Cvg~~~~---------~~~~~~~~C~~C~~   65 (72)
T 1wee_A           20 KCGTKDD--DGERMLACD--------GCGVWHHTRCIGINNA---------DALPSKFLCFRCIE   65 (72)
T ss_dssp             TTCCCSC--CSSCEEECS--------SSCEEEETTTTTCCTT---------SCCCSCCCCHHHHH
T ss_pred             eCCCccC--CCCcEEECC--------CCCCccCCeeeccCcc---------ccCCCcEECCCccC
Confidence            4555432  356799999        8999999999732211         12346899998853

>3dlq_R Interleukin-22 receptor subunit alpha-1; cytokine-receptor complex, fibronectin-III, cytokine, glycoprotein, polymorphism, secreted, membrane; 1.90A {Homo sapiens} PDB: 3dgc_R*

Probab=82.92  E-value=4.6  Score=39.87  Aligned_cols=71  Identities=15%  Similarity=0.141  Sum_probs=46.7

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCC-C-------------CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDP-S-------------PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPA  408 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~-s-------------~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~  408 (734)
                      .+..|.++. ...+|.|.+..... .             ..+ --|+|-||+....    -. +.--.++.+.|.+|.|.
T Consensus       105 gPP~v~l~~-~~~~l~V~i~~P~~~~~~~~g~~~sl~di~~~-l~Y~V~~~~~~s~----~k-~~~~~~~~~~l~~L~p~  177 (211)
T 3dlq_R          105 KPPDVTCIS-KVRSIQMIVHPTPTPIRAGDGHRLTLEDIFHD-LFYHLELQVNRTY----QM-HLGGKQREYEFFGLTPD  177 (211)
T ss_dssp             CCCCEEEEE-CSSEEEEEECCCBCSCCC----CCBHHHHCTT-CEEEEEEEC--------CE-EEEESSSEEEEESCCTT
T ss_pred             CCCEEEEEE-cCCEEEEEEECCCCccccCCCceeEHHHhcCC-cEEEEEEEECCCc----EE-EEecCCCEEEEccCCCC
Confidence            344577764 45588888765432 1             122 3799999888642    12 23345689999999999


Q ss_pred             eeeeEEEEeccC
Q 004714          409 TEYQFKVVSSNG  420 (734)
Q Consensus       409 TEY~fkvvsF~~  420 (734)
                      |+|+++|-+|..
T Consensus       178 t~YCv~v~~~~~  189 (211)
T 3dlq_R          178 TEFLGTIMILVP  189 (211)
T ss_dssp             CEEEEEEEEEEG
T ss_pred             CcEEEEEEEEEc
Confidence            999999999865

>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2

Probab=81.66  E-value=0.52  Score=39.95  Aligned_cols=51  Identities=24%  Similarity=0.548  Sum_probs=33.7

Q ss_pred             eeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhcc-ccccccCCCccccceeEEeccCCC
Q 004714          164 ICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNE-RSGIGKDRCYSGLDGSFYCISCRK  228 (734)
Q Consensus       164 IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~-~~G~~~~g~~~~lD~~f~C~~Cgk  228 (734)
                      ||.+.|++   -.||.|+      +..|..|-|+.|.=-.. .++     ........|+|..|-.
T Consensus        20 iC~~~~~~---g~MI~CD------~~~C~~W~H~~CVgi~~~~~~-----~~~~~~~~~~C~~C~~   71 (78)
T 1wew_A           20 VCGNSLET---DSMIQCE------DPRCHVWQHVGCVILPDKPMD-----GNPPLPESFYCEICRL   71 (78)
T ss_dssp             SSCCCCCC---SCEEECS------STTTCCEEEHHHHSCCCTTTC-----SCSCSCSSCCCHHHHH
T ss_pred             ECCCcCCC---CCEEEEC------CccCCccccCEEEcccccccc-----ccccCCCCEECCCCCc
Confidence            67777432   3899998      23899999999973222 122     1123567899998843

>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}

Probab=81.64  E-value=0.3  Score=40.79  Aligned_cols=44  Identities=32%  Similarity=0.630  Sum_probs=31.5

Q ss_pred             eeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccccceeEEeccCCC
Q 004714          164 ICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRK  228 (734)
Q Consensus       164 IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~Cgk  228 (734)
                      ||.+-++   +-.||.|+        .|..|-|+.|.      |+...    .+...|+|..|.+
T Consensus        23 iC~~~~~---~~~MIqCd--------~C~~WfH~~Cv------gi~~~----~~~~~~~C~~C~~   66 (68)
T 3o70_A           23 FCMKPFA---GRPMIECN--------ECHTWIHLSCA------KIRKS----NVPEVFVCQKCRD   66 (68)
T ss_dssp             TTCCCCT---TCCEEECT--------TTCCEEETTTT------TCCTT----SCCSSCCCHHHHT
T ss_pred             ECCCcCC---CCCEEECC--------CCCcccccccc------CcCcc----cCCCcEECCCCCC
Confidence            6666543   67899999        89999999997      33221    1235899998854

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	734
d2cuma1	93	b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens)	1e-07
d1tdqa2	92	b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicu	2e-07
d1fnfa3	89	b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 m	3e-07
d1qr4a2	88	b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallu	7e-07
d1x5la1	98	b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human	9e-07
d1fnaa_	91	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	2e-06
d1tdqa1	93	b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus)	2e-06
d1wfoa1	117	b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens)	4e-06
d1x5za1	102	b.1.2.1 (A:8-109) Receptor-type tyrosine-protein p	5e-06
d1x5xa1	96	b.1.2.1 (A:8-103) Fibronectin type-III domain cont	1e-05
d1j8ka_	94	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	1e-05
d1uena_	125	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	2e-05
d1fnha3	89	b.1.2.1 (A:183-271) Fibronectin, different Fn3 mod	2e-05
d1qr4a1	87	b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus)	3e-05
d1va9a1	109	b.1.2.1 (A:8-116) Down syndrome cell adhesion mole	3e-05
d1tdqa3	86	b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegic	4e-05
d1x4za1	108	b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {	5e-05
d1x5ka1	111	b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [	5e-05
d1x5fa1	107	b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [	5e-05
d1fnfa1	94	b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 m	6e-05
d1x5ga1	103	b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [	6e-05
d1ueya_	127	b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens	8e-05
d1x4ya1	101	b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {	9e-05
d1x5ha1	119	b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [	1e-04
d1bpva_	104	b.1.2.1 (A:) Type I titin module {Human (Homo sapi	1e-04
d2dn7a1	94	b.1.2.1 (A:8-101) Receptor-type tyrosine-protein p	2e-04
d1fnfa2	91	b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 m	2e-04
d1cfba2	105	b.1.2.1 (A:710-814) Neuroglian, two amino proximal	2e-04
d1wisa1	111	b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens)	3e-04
d1fnha1	90	b.1.2.1 (A:3-92) Fibronectin, different Fn3 module	4e-04
d1wfna1	106	b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens)	4e-04
d2ibga1	95	b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit	4e-04
d1fnha2	90	b.1.2.1 (A:93-182) Fibronectin, different Fn3 modu	6e-04
d1x5ja1	100	b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [	7e-04
d1cfba1	100	b.1.2.1 (A:610-709) Neuroglian, two amino proximal	7e-04
d2dtge2	196	b.1.2.1 (E:593-807) Insulin receptor {Human (Homo	8e-04
d1iarb2	101	b.1.2.1 (B:97-197) Interleukin-4 receptor alpha ch	0.001
d1tena_	90	b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId	0.001
d1wf5a1	108	b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens)	0.001
d3d48r2	104	b.1.2.1 (R:101-204) Prolactin receptor {Human (Hom	0.001
d1x5ya1	98	b.1.2.1 (A:8-105) Myosin binding protein C, fast-t	0.002
d1uc6a_	109	b.1.2.1 (A:) Ciliary neurotrophic factor receptor	0.002
d1uema_	117	b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens	0.002
d1owwa_	93	b.1.2.1 (A:) Fibronectin, different Fn3 modules {H	0.003
d2ic2a1	107	b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit	0.003
d1k85a_	88	b.1.2.1 (A:) Fibronectin type III domain from chit	0.004
d2b5ib2	104	b.1.2.1 (B:104-207) Interleukin-2 receptor beta ch	0.004

>d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.3 bits (114), Expect = 1e-07
 Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 6/94 (6%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  ++ ++V   +  +        P     Y L                L    T   + 
Sbjct: 5   PRDLEAKEVTPRTALLTW---TEPPVRPAGYLLSFHTPGGQTQ---EILLPGGITSHQLL 58

Query: 404 GLCPATEYQFKVVSSNGTTELGRCEIWFSTGSSR 437
           GL P+T Y  ++ +  G + L      F+TG  R
Sbjct: 59  GLFPSTSYNARLQAMWGQSLLPPVSTSFTTGGLR 92

>d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 92

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 47.2 bits (111), Expect = 2e-07
 Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 4/78 (5%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPN-TRFVV 402
           P  ++     ATSL +     D S      Y + +                    T+  +
Sbjct: 4   PKNLRVGSRTATSLDL---EWDNSEAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTL 60

Query: 403 TGLCPATEYQFKVVSSNG 420
           T L P TEY   + +   
Sbjct: 61  TDLVPGTEYGVGISAVMN 78

>d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 3e-07
 Identities = 21/77 (27%), Positives = 28/77 (36%), Gaps = 4/77 (5%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  + F D+ A S TV           I  Y + H   H     R    +        +T
Sbjct: 4   PTGIDFSDITANSFTV---HWIAPRATITGYRIRHHPEHFSGRPR-EDRVPHSRNSITLT 59

Query: 404 GLCPATEYQFKVVSSNG 420
            L P TEY   +V+ NG
Sbjct: 60  NLTPGTEYVVSIVALNG 76

>d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 88

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 45.6 bits (107), Expect = 7e-07
 Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 5/80 (6%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  + F D+   S TV   S  P    + SY + +     G       T+    TR  + 
Sbjct: 4   PKGISFSDITENSATV---SWTPPRSRVDSYRVSYVPITGG--TPNVVTVDGSKTRTKLV 58

Query: 404 GLCPATEYQFKVVSSNGTTE 423
            L P  +Y   ++S  G  E
Sbjct: 59  KLVPGVDYNVNIISVKGFEE 78

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 9e-07
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
             +++ E    TS++++    +   G I+ Y + +         +   TL A  TR  V+
Sbjct: 7   VVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKD--KEMQSYSTLKAVTTRATVS 64

Query: 404 GLCPATEYQFKVVSSN 419
           GL P T Y F+V +  
Sbjct: 65  GLKPGTRYVFQVRART 80

>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.4 bits (104), Expect = 2e-06
 Identities = 14/74 (18%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 347 VKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLC 406
           ++      TSL +   S D     +  Y + +       P +   T+    +   ++GL 
Sbjct: 3   LEVVAATPTSLLI---SWDAPAVTVRYYRITYGETGGNSPVQEF-TVPGSKSTATISGLK 58

Query: 407 PATEYQFKVVSSNG 420
           P  +Y   V +  G
Sbjct: 59  PGVDYTITVYAVTG 72

>d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.2 bits (103), Expect = 2e-06
 Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 4/90 (4%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  +   DV  T   V      P    +    L +     G   + T  L  P +++ V 
Sbjct: 7   PTQILVRDVSDTVAFVEW---TPPRAKVDFILLKYGL-VGGEGGKTTFRLQPPLSQYSVQ 62

Query: 404 GLCPATEYQFKVVSSNGTTELGRCEIWFST 433
            L P + Y+  + +  GT E       F+T
Sbjct: 63  ALRPGSRYEVSISAVRGTNESDASSTQFTT 92

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (103), Expect = 4e-06
 Identities = 18/76 (23%), Positives = 32/76 (42%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  + F +VR TS+ ++        G I++Y + HR             L     ++  T
Sbjct: 24  PMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVLAPSARQYTAT 83

Query: 404 GLCPATEYQFKVVSSN 419
           GL P + Y F++ +  
Sbjct: 84  GLKPESVYLFRITAQT 99

>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]} Length = 102

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.6 bits (102), Expect = 5e-06
 Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 5/76 (6%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P   K E    TS+ +      P    I +Y L ++    G   R T     P T + + 
Sbjct: 14  PLNFKAEPESETSILLSW--TPPRSDTIANYELVYKDGEHGEEQRIT---IEPGTSYRLQ 68

Query: 404 GLCPATEYQFKVVSSN 419
           GL P + Y F++ + +
Sbjct: 69  GLKPNSLYYFRLAARS 84

>d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (99), Expect = 1e-05
 Identities = 13/78 (16%), Positives = 26/78 (33%), Gaps = 1/78 (1%)

Query: 343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 402
           +P          T L++       +P +     +      E             +  + V
Sbjct: 3   MPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEME-EETSGYGFKPKYDGEDLAYTV 61

Query: 403 TGLCPATEYQFKVVSSNG 420
             L  +T+Y+FKV++ N 
Sbjct: 62  KNLRRSTKYKFKVIAYNS 79

>d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (98), Expect = 1e-05
 Identities = 19/95 (20%), Positives = 33/95 (34%), Gaps = 4/95 (4%)

Query: 340 NVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTR 399
           N+  P  + F DV   S+ +   + +   G +  Y + +    +G               
Sbjct: 1   NIDRPKGLAFTDVDVDSIKI---AWESPQGQVSRYRVTYSSPEDGIH-ELFPAPDGEEDT 56

Query: 400 FVVTGLCPATEYQFKVVSSNGTTELGRCEIWFSTG 434
             + GL P +EY   VV+ +   E        ST 
Sbjct: 57  AELQGLRPGSEYTVSVVALHDDMESQPLIGTQSTA 91

>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.2 bits (98), Expect = 2e-05
 Identities = 15/85 (17%), Positives = 25/85 (29%), Gaps = 8/85 (9%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTC------TLFA 395
           P  V+   V +T   V             +  Y +++ +                 T   
Sbjct: 18  PGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQG 77

Query: 396 PNTRFVVTGLCPATEYQFKVVSSNG 420
             T  ++ GL P + Y   V   NG
Sbjct: 78  SKTHGMLPGLEPFSHYTLNVRVVNG 102

>d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 89

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 2e-05
 Identities = 19/77 (24%), Positives = 28/77 (36%), Gaps = 4/77 (5%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P+ ++F      SL V   S  P    I  Y + + +     P           T   +T
Sbjct: 4   PSNLRFLATTPNSLLV---SWQPPRARITGYIIKYEKPGSP-PREVVPRPRPGVTEATIT 59

Query: 404 GLCPATEYQFKVVSSNG 420
           GL P TEY   V++   
Sbjct: 60  GLEPGTEYTIYVIALKN 76

>d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]} Length = 87

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 41.0 bits (95), Expect = 3e-05
 Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 6/90 (6%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  ++  D   T+L++              Y L +              +   +T F++ 
Sbjct: 3   PKDLEVSDPTETTLSL---RWRRPVAKFDRYRLTYVSPSGKKN---EMEIPVDSTSFILR 56

Query: 404 GLCPATEYQFKVVSSNGTTELGRCEIWFST 433
           GL   TEY   +V+  G  +     I  ST
Sbjct: 57  GLDAGTEYTISLVAEKGRHKSKPTTIKGST 86

>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 3e-05
 Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 5/82 (6%)

Query: 344 PNMVKFEDVRATSLTVVLG--SEDPSPGNIISYTLWHRRAHEGFPARPTCTLF---APNT 398
           P  V  + V + S+ V      ++   G I  Y + +R    G   + +         + 
Sbjct: 12  PMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSE 71

Query: 399 RFVVTGLCPATEYQFKVVSSNG 420
            + +  L    +Y   V + N 
Sbjct: 72  VYTLDNLKKFAQYGVVVQAFNR 93

>d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 86

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 40.6 bits (94), Expect = 4e-05
 Identities = 14/80 (17%), Positives = 27/80 (33%), Gaps = 6/80 (7%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  +       TS+++       + G I  Y +    +          T+    T + +T
Sbjct: 4   PRDLMVTASSETSISL---IWTKASGPIDHYRITFTPSSGI---SSEVTVPRDRTSYTLT 57

Query: 404 GLCPATEYQFKVVSSNGTTE 423
            L P  EY   + +  G  +
Sbjct: 58  DLEPGAEYIISITAERGRQQ 77

>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (95), Expect = 5e-05
 Identities = 15/77 (19%), Positives = 28/77 (36%), Gaps = 1/77 (1%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHE-GFPARPTCTLFAPNTRFVV 402
           P+         TS+ V           I S+ + +++  + G     T  +        +
Sbjct: 14  PDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEI 73

Query: 403 TGLCPATEYQFKVVSSN 419
           TGL     Y+F+V + N
Sbjct: 74  TGLEKGISYKFRVRALN 90

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (95), Expect = 5e-05
 Identities = 11/74 (14%), Positives = 24/74 (32%), Gaps = 1/74 (1%)

Query: 347 VKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARP-TCTLFAPNTRFVVTGL 405
           V  ++ +  ++ V       + G I  Y +++               +        +  L
Sbjct: 20  VVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQEL 79

Query: 406 CPATEYQFKVVSSN 419
              T Y FK+ + N
Sbjct: 80  TLDTPYYFKIQARN 93

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (95), Expect = 5e-05
 Identities = 14/76 (18%), Positives = 22/76 (28%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  V    V    + +   +    P                   R   T      +  + 
Sbjct: 14  PRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSHPGEMQVTIQ 73

Query: 404 GLCPATEYQFKVVSSN 419
            L PAT Y F+V++ N
Sbjct: 74  NLMPATVYIFRVMAQN 89

>d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 6e-05
 Identities = 13/80 (16%), Positives = 23/80 (28%), Gaps = 1/80 (1%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  +  E    T   + +  E  +  +I  Y +     +          + A  +     
Sbjct: 5   PTNLHLEANPDTG-VLTVSWERSTTPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFD 63

Query: 404 GLCPATEYQFKVVSSNGTTE 423
            L P  EY   V +     E
Sbjct: 64  NLSPGLEYNVSVYTVKDDKE 83

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 103

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (94), Expect = 6e-05
 Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 4/76 (5%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
              ++      TS+TV   +     G I +Y L++              +   +  + + 
Sbjct: 14  APNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGT----DKEQDVDVSSHSYTIN 69

Query: 404 GLCPATEYQFKVVSSN 419
           GL   TEY F+VV+ N
Sbjct: 70  GLKKYTEYSFRVVAYN 85

>d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 127

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (94), Expect = 8e-05
 Identities = 13/77 (16%), Positives = 25/77 (32%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  ++  D    S+ +     D +   I  + + +  A          T  +        
Sbjct: 20  PFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQL 79

Query: 404 GLCPATEYQFKVVSSNG 420
            L P   Y F+V++ N 
Sbjct: 80  NLSPYVNYSFRVMAVNS 96

>d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.0 bits (92), Expect = 9e-05
 Identities = 12/80 (15%), Positives = 23/80 (28%), Gaps = 3/80 (3%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGN---IISYTLWHRRAHEGFPARPTCTLFAPNTRF 400
           P +   + V  T++ +       S  N      Y  +     +         +       
Sbjct: 5   PYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWH 64

Query: 401 VVTGLCPATEYQFKVVSSNG 420
            ++ L P T Y  K+   N 
Sbjct: 65  SISHLQPETSYDIKMQCFNE 84

>d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 119

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 1e-04
 Identities = 17/78 (21%), Positives = 29/78 (37%), Gaps = 3/78 (3%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPNTRFV 401
           P  +  E   + S+ +      P+  N  I  Y + +R+A        T          +
Sbjct: 15  PQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTETLVS-GTQLSQL 73

Query: 402 VTGLCPATEYQFKVVSSN 419
           + GL   TEY F+V +  
Sbjct: 74  IEGLDRGTEYNFRVAALT 91

>d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Type I titin module
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (91), Expect = 1e-04
 Identities = 13/76 (17%), Positives = 28/76 (36%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P      ++   ++T+     + + G  I+  +  +R                   F V+
Sbjct: 6   PGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFSNILENEFTVS 65

Query: 404 GLCPATEYQFKVVSSN 419
           GL     Y+F+V++ N
Sbjct: 66  GLTEDAAYEFRVIAKN 81

>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]} Length = 94

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase F, PTPRF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 2e-04
 Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 351 DVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATE 410
                +  +        PG ++ Y L + RA E  P   T      +  F VTGL   T 
Sbjct: 10  TTAMNTALLQWHPPKELPGELLGYRLQYCRADEARPN--TIDFGKDDQHFTVTGLHKGTT 67

Query: 411 YQFKVVSSN 419
           Y F++ + N
Sbjct: 68  YIFRLAAKN 76

>d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 91

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 2e-04
 Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 3/91 (3%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  ++F ++   ++ V   +  P P   ++  L      +        ++   +   V+T
Sbjct: 4   PTDLRFTNIGPDTMRV---TWAPPPSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLT 60

Query: 404 GLCPATEYQFKVVSSNGTTELGRCEIWFSTG 434
            L P TEY   V S     E         TG
Sbjct: 61  NLLPGTEYVVSVSSVYEQHESTPLRGRQKTG 91

>d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} Length = 105

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

 Score = 38.8 bits (89), Expect = 2e-04
 Identities = 12/78 (15%), Positives = 21/78 (26%), Gaps = 2/78 (2%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPNTRFV 401
           P+ V  +     +L +          N     Y +  +R                    V
Sbjct: 8   PDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIV 67

Query: 402 VTGLCPATEYQFKVVSSN 419
           +       +Y  KVV+ N
Sbjct: 68  IADQPTFVKYLIKVVAIN 85

>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 111

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (89), Expect = 3e-04
 Identities = 12/81 (14%), Positives = 25/81 (30%), Gaps = 4/81 (4%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG----FPARPTCTLFAPNTR 399
           P  +   ++   S+T+          +I  + +  +    G    +      +       
Sbjct: 14  PTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARS 73

Query: 400 FVVTGLCPATEYQFKVVSSNG 420
             V  L P T Y F++   N 
Sbjct: 74  MEVPDLNPFTCYSFRMRQVNI 94

>d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (87), Expect = 4e-04
 Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 4/90 (4%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  +KF  V  TSL+       P    +  Y +      +  P +        ++  VV+
Sbjct: 3   PTDLKFTQVTPTSLSA---QWTPPNVQLTGYRVRVTPKEKTGPMKEINLA-PDSSSVVVS 58

Query: 404 GLCPATEYQFKVVSSNGTTELGRCEIWFST 433
           GL  AT+Y+  V +   T      +   +T
Sbjct: 59  GLMVATKYEVSVYALKDTLTSRPAQGVVTT 88

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 106

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.3 bits (88), Expect = 4e-04
 Identities = 14/76 (18%), Positives = 23/76 (30%), Gaps = 1/76 (1%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
              + F ++  TSL V         G +  Y +     +                 + VT
Sbjct: 14  VGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNTRVTHYLP-NVTLEYRVT 72

Query: 404 GLCPATEYQFKVVSSN 419
           GL   T Y  +V +  
Sbjct: 73  GLTALTTYTIEVAAMT 88

>d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 95

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 37.8 bits (86), Expect = 4e-04
 Identities = 16/79 (20%), Positives = 31/79 (39%), Gaps = 1/79 (1%)

Query: 343 VPNMVKFEDVRATSLTVVLGSEDPSPG-NIISYTLWHRRAHEGFPARPTCTLFAPNTRFV 401
           VP +++ E+   T++ +       +    I  Y  ++R +             A    F 
Sbjct: 9   VPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHARSFK 68

Query: 402 VTGLCPATEYQFKVVSSNG 420
           +  L  AT Y+FK+ S + 
Sbjct: 69  IAPLETATMYEFKLQSFSA 87

>d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (85), Expect = 6e-04
 Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 5/81 (6%)

Query: 340 NVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTR 399
           NV  P   +  D   T++T+   S       I  + +    A+   P + T         
Sbjct: 1   NVSPPRRARVTDATETTITI---SWRTKTETITGFQVDAVPANGQTPIQRTIK--PDVRS 55

Query: 400 FVVTGLCPATEYQFKVVSSNG 420
           + +TGL P T+Y+  + + N 
Sbjct: 56  YTITGLQPGTDYKIYLYTLND 76

>d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (85), Expect = 7e-04
 Identities = 16/79 (20%), Positives = 26/79 (32%), Gaps = 2/79 (2%)

Query: 344 PNMVKFEDVRATSLTVVLG--SEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFV 401
           P  V+   +   ++ +     S         S     R               A    ++
Sbjct: 5   PVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYL 64

Query: 402 VTGLCPATEYQFKVVSSNG 420
           VTGL P T Y+F V+ + G
Sbjct: 65  VTGLKPNTLYEFSVMVTKG 83

>d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]} Length = 100

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

 Score = 37.3 bits (85), Expect = 7e-04
 Identities = 14/79 (17%), Positives = 24/79 (30%), Gaps = 2/79 (2%)

Query: 343 VPNMVKFEDVRATSLTVVLGSEDPSPGN--IISYTLWHRRAHEGFPARPTCTLFAPNTRF 400
           VPN  K   +   +    +  E        I+ YT+    +                   
Sbjct: 5   VPNAPKLTGITCQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSS 64

Query: 401 VVTGLCPATEYQFKVVSSN 419
            V  + P   Y F+V++ N
Sbjct: 65  FVVQMSPWANYTFRVIAFN 83

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 196

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.0 bits (89), Expect = 8e-04
 Identities = 13/103 (12%), Positives = 30/103 (29%)

Query: 327 SNTILPNPSVQGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFP 386
            ++     S   ++  +   ++    R T    +         +    +L          
Sbjct: 84  EDSAGECCSCPKTDSQILKELEESSFRKTFEDYLHNVVFVPRPSRKRRSLGDVGNAGNNE 143

Query: 387 ARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCEI 429
                         V++GL   T Y+ ++ + N  T   RC +
Sbjct: 144 EHRPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSV 186

>d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]} Length = 101

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-4 receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (84), Expect = 0.001
 Identities = 8/80 (10%), Positives = 22/80 (27%), Gaps = 4/80 (5%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLF----APNTR 399
           P  +      + +L +   +  P    + ++  +                      P+ R
Sbjct: 5   PGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEPSLR 64

Query: 400 FVVTGLCPATEYQFKVVSSN 419
              + L     Y+ +V +  
Sbjct: 65  IAASTLKSGISYRARVRAWA 84

>d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]} Length = 90

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (84), Expect = 0.001
 Identities = 17/90 (18%), Positives = 33/90 (36%), Gaps = 4/90 (4%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P+ ++ +DV  T+  +   +       I    L +           T  L     ++ + 
Sbjct: 5   PSQIEVKDVTDTTALI---TWFKPLAEIDGIELTYGIKDVPGDRT-TIDLTEDENQYSIG 60

Query: 404 GLCPATEYQFKVVSSNGTTELGRCEIWFST 433
            L P TEY+  ++S  G       +  F+T
Sbjct: 61  NLKPDTEYEVSLISRRGDMSSNPAKETFTT 90

>d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 108

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (85), Expect = 0.001
 Identities = 14/73 (19%), Positives = 23/73 (31%), Gaps = 1/73 (1%)

Query: 347 VKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLC 406
                V   ++ +           +I Y L     +  +            T   V GL 
Sbjct: 19  ATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWTVLLASV-DPKATSVTVKGLV 77

Query: 407 PATEYQFKVVSSN 419
           PA  YQF++ + N
Sbjct: 78  PARSYQFRLCAVN 90

>d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.9 bits (84), Expect = 0.001
 Identities = 14/75 (18%), Positives = 21/75 (28%), Gaps = 1/75 (1%)

Query: 347 VKFEDVRATSLTVVLGSEDPSPGNIISYTL-WHRRAHEGFPARPTCTLFAPNTRFVVTGL 405
           VK  + R   L +              +TL +  R      A          T F +  L
Sbjct: 13  VKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEIHFAGQQTEFKILSL 72

Query: 406 CPATEYQFKVVSSNG 420
            P  +Y  +V     
Sbjct: 73  HPGQKYLVQVRCKPD 87

>d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]} Length = 98

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Myosin binding protein C, fast-type
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.0 bits (82), Expect = 0.002
 Identities = 17/76 (22%), Positives = 21/76 (27%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  +  EDV  T+ T+     D      I   L            P          F V 
Sbjct: 5   PQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGFTVK 64

Query: 404 GLCPATEYQFKVVSSN 419
            L       F+VV  N
Sbjct: 65  DLPTGARILFRVVGVN 80

>d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 109

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ciliary neurotrophic factor receptor alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (82), Expect = 0.002
 Identities = 11/78 (14%), Positives = 22/78 (28%), Gaps = 2/78 (2%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFV 401
           P  V    V +    + +  + P   P        +  R       +      +  T   
Sbjct: 11  PENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQHVELSNGTAHT 70

Query: 402 VTGLCPATEYQFKVVSSN 419
           +T      EY  +V + +
Sbjct: 71  ITDAYAGKEYIIQVAAKD 88

>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]} Length = 117

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (83), Expect = 0.002
 Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P+  +  DV   S+T+      P      +Y +           +         T + V 
Sbjct: 19  PSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVAN-HVKTTLYTVR 77

Query: 404 GLCPATEYQFKVVSSN 419
           GL P T Y F V + N
Sbjct: 78  GLRPNTIYLFMVRAIN 93

>d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.6 bits (81), Expect = 0.003
 Identities = 17/92 (18%), Positives = 32/92 (34%), Gaps = 1/92 (1%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVT 403
           P  V   +  +   +  +    P P +I  Y L  R  +     +   T+      + + 
Sbjct: 3   PVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWKE-ATIPGHLNSYTIK 61

Query: 404 GLCPATEYQFKVVSSNGTTELGRCEIWFSTGS 435
           GL P   Y+ +++S             F+T S
Sbjct: 62  GLKPGVVYEGQLISIQQYGHQEVTRFDFTTTS 93

>d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 107

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 35.8 bits (81), Expect = 0.003
 Identities = 10/87 (11%), Positives = 26/87 (29%), Gaps = 11/87 (12%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-----------FPARPTCT 392
           P       +   S+ +           I+ + + +R   +            +      +
Sbjct: 3   PTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNS 62

Query: 393 LFAPNTRFVVTGLCPATEYQFKVVSSN 419
               +    VT L P   Y+F++++  
Sbjct: 63  ELGKSFTASVTDLKPQHTYRFRILAVY 89

>d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]} Length = 88

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type III domain from chitinase A1.
species: Bacillus circulans [TaxId: 1397]

 Score = 35.2 bits (80), Expect = 0.004
 Identities = 10/78 (12%), Positives = 22/78 (28%), Gaps = 10/78 (12%)

Query: 343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVV 402
            P  +       +S+T+       +    ++    +                   T   +
Sbjct: 6   APTNLASTAQTTSSITLSW--TASTDNVGVTGYDVYNGTALATTV--------TGTTATI 55

Query: 403 TGLCPATEYQFKVVSSNG 420
           +GL   T Y F V + + 
Sbjct: 56  SGLAADTSYTFTVKAKDA 73

>d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]} Length = 104

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-2 receptor beta chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (80), Expect = 0.004
 Identities = 14/89 (15%), Positives = 21/89 (23%), Gaps = 2/89 (2%)

Query: 344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLF--APNTRFV 401
           P  ++   V      +       S           R    G        L          
Sbjct: 6   PISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWIC 65

Query: 402 VTGLCPATEYQFKVVSSNGTTELGRCEIW 430
           +  L P T+Y+F+V       E      W
Sbjct: 66  LETLTPDTQYEFQVRVKPLQGEFTTWSPW 94

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	734
d2ibga1	95	Hedgehog receptor iHog {Fruit fly (Drosophila mela	98.92
d2fnba_	95	Fibronectin, different Fn3 modules {Human (Homo sa	98.89
d1fnha3	89	Fibronectin, different Fn3 modules {Human (Homo sa	98.84
d1tdqa2	92	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	98.84
d1qr4a2	88	Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}	98.83
d1tena_	90	Tenascin {Human (Homo sapiens) [TaxId: 9606]}	98.81
d1fnfa3	89	Fibronectin, different Fn3 modules {Human (Homo sa	98.79
d1fnfa2	91	Fibronectin, different Fn3 modules {Human (Homo sa	98.77
d1qr4a1	87	Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}	98.77
d1j8ka_	94	Fibronectin, different Fn3 modules {Human (Homo sa	98.76
d2cuma1	93	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	98.75
d1fnha2	90	Fibronectin, different Fn3 modules {Human (Homo sa	98.71
d1fnha1	90	Fibronectin, different Fn3 modules {Human (Homo sa	98.68
d2dn7a1	94	Receptor-type tyrosine-protein phosphatase F, PTPR	98.67
d2djsa1	95	Ephrin type-B receptor 1 {Human (Homo sapiens) [Ta	98.65
d2vkwa2	93	Neural cell adhesion molecule 1, NCAM {Human (Homo	98.61
d1fnaa_	91	Fibronectin, different Fn3 modules {Human (Homo sa	98.61
d1x5ga1	103	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	98.59
d1fnfa1	94	Fibronectin, different Fn3 modules {Human (Homo sa	98.59
d1wfoa1	117	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	98.59
d1ujta_	120	KIAA1568 protein {Human (Homo sapiens) [TaxId: 960	98.55
d1x5la1	98	Ephrin type-A receptor 8 {Human (Homo sapiens) [Ta	98.54
d1qg3a1	92	Integrin beta-4 subunit {Human (Homo sapiens) [Tax	98.53
d1x5za1	102	Receptor-type tyrosine-protein phosphatase delta,	98.52
d1x4ya1	101	Brother of CDO precursor (BOC) {Mouse (Mus musculu	98.52
d1wfna1	106	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	98.51
d1x5fa1	107	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	98.5
d2cuha1	102	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	98.45
d1tdqa1	93	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	98.45
d1tdqa3	86	Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}	98.42
d1x5ka1	111	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	98.4
d1x5xa1	96	Fibronectin type-III domain containing protein 3a,	98.38
d1uema_	117	KIAA1568 protein {Human (Homo sapiens) [TaxId: 960	98.38
d2b5ib2	104	Interleukin-2 receptor beta chain {Human (Homo sap	98.38
d1x5aa1	94	Ephrin type-A receptor 1 {Mouse (Mus musculus) [Ta	98.36
d1qg3a2	103	Integrin beta-4 subunit {Human (Homo sapiens) [Tax	98.35
d1x4za1	108	Brother of CDO precursor (BOC) {Mouse (Mus musculu	98.33
d1x5ja1	100	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	98.33
d1cfba1	100	Neuroglian, two amino proximal Fn3 repeats {Drosop	98.31
d1x5ha1	119	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	98.31
d2haza1	101	Neural cell adhesion molecule 1, NCAM {Human (Homo	98.29
d1wf5a1	108	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	98.29
d1bpva_	104	Type I titin module {Human (Homo sapiens) [TaxId:	98.27
d1wfta_	123	Host cell factor 2, HCF-2 {Mouse (Mus musculus) [T	98.26
d2dtge3	125	Insulin receptor {Human (Homo sapiens) [TaxId: 960	98.25
d1x3da1	105	Fibronectin type-III domain containing protein 3a,	98.25
d1x5ya1	98	Myosin binding protein C, fast-type {Mouse (Mus mu	98.22
d1x4xa1	93	Fibronectin type-III domain containing protein 3a,	98.22
d2cuia1	101	Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}	98.2
d1wfua_	120	Fibronectin type 3 and ankyrin repeat domains 1 pr	98.2
d1va9a1	109	Down syndrome cell adhesion molecule-like protein	98.19
d1cfba2	105	Neuroglian, two amino proximal Fn3 repeats {Drosop	98.19
d1v5ja_	108	KIAA1355 {Human (Homo sapiens) [TaxId: 9606]}	98.17
d1wisa1	111	Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}	98.15
d1ueya_	127	KIAA0343 protein {Human (Homo sapiens) [TaxId: 960	98.14
d2crza1	97	Fibronectin type-III domain containing protein 3a,	98.1
d1k85a_	88	Fibronectin type III domain from chitinase A1. {Ba	98.08
d1owwa_	93	Fibronectin, different Fn3 modules {Human (Homo sa	98.07
d2ic2a1	107	Hedgehog receptor iHog {Fruit fly (Drosophila mela	98.06
d1x5ia1	113	Neogenin {Human (Homo sapiens) [TaxId: 9606]}	98.05
d2crma1	107	Fibronectin type-III domain containing protein 3a,	98.03
d1bqua2	115	Cytokine receptor gp130 cytokine-binding domains {	97.98
d2d9qb2	105	Granulocyte colony-stimulating factor (GC-SF) rece	97.96
d1uena_	125	KIAA0343 protein {Human (Homo sapiens) [TaxId: 960	97.87
d1wk0a_	137	Fibronectin type-III domain containing protein 3a,	97.86
d1wj3a_	117	Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxI	97.77
d3d48r2	104	Prolactin receptor {Human (Homo sapiens) [TaxId: 9	97.76
d1cd9b2	106	Granulocyte colony-stimulating factor (GC-SF) rece	97.76
d1iarb2	101	Interleukin-4 receptor alpha chain {Human (Homo sa	97.73
d1bqua1	95	Cytokine receptor gp130 cytokine-binding domains {	97.68
d2dtge1	102	Insulin receptor {Human (Homo sapiens) [TaxId: 960	97.62
d1cd9b1	107	Granulocyte colony-stimulating factor (GC-SF) rece	97.53
d1n26a3	104	Interleukin-6 receptor alpha chain, domains 2 and	97.51
d2gysa4	100	Common beta-chain in the GM-CSF, IL-3 and IL-5 rec	97.4
d1f6fb2	103	Prolactin receptor {Rat (Rattus norvegicus) [TaxId	97.39
d2b5ic1	95	Cytokine receptor common gamma chain {Human (Homo	97.24
d1erna2	105	Erythropoietin (EPO) receptor {Human (Homo sapiens	97.06
d1axib2	106	Growth hormone receptor {Human (Homo sapiens) [Tax	96.85
d1uc6a_	109	Ciliary neurotrophic factor receptor alpha {Human	96.83
d2gysa2	114	Common beta-chain in the GM-CSF, IL-3 and IL-5 rec	96.74
d2cspa1	117	Rim binding protein 2 {Human (Homo sapiens) [TaxId	96.12
d1fyhb1	98	Interferon-gamma receptor alpha chain {Human (Homo	96.07
d2dtge2	196	Insulin receptor {Human (Homo sapiens) [TaxId: 960	95.74
d1wepa_	79	PHD finger protein 8 {Mouse (Mus musculus) [TaxId:	93.73
d2dtge2	196	Insulin receptor {Human (Homo sapiens) [TaxId: 960	93.7
d1we9a_	64	PHD finger protein At5g26210 {Thale cress (Arabido	93.59
d1y6kr1	99	Interleukin-10 receptor 1, IL-10R1 {Human (Homo sa	93.07
d2c4fu1	116	Extracellular region of human tissue factor {Human	90.83
d1weea_	72	PHD finger protein At1g33420 {Thale cress (Arabido	88.91
d1weva_	88	PHD finger protein 22 {Mouse (Mus musculus) [TaxId	87.11
d1f62a_	51	Williams-Beuren syndrome transcription factor, WST	82.53
d1wewa_	78	Sumoylation ligase E3, SIZ1 {Thale cress (Arabidop	81.77
d1xzwa1	119	Purple acid phosphatase, N-terminal domain {Sweet	80.95

>d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.92  E-value=7.4e-10  Score=91.55  Aligned_cols=84  Identities=19%  Similarity=0.202  Sum_probs=64.5

Q ss_pred             CcccCceEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 004714          340 NVIVPNMVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  418 (734)
Q Consensus       340 ~l~~~~~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  418 (734)
                      .++++..++++.++++||.|.++.... ....|.||+|+||.....-...-..+.....+.++|+||.|.|.|.|||.+|
T Consensus         6 P~~~P~~~~v~~~s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~   85 (95)
T d2ibga1           6 PMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHARSFKIAPLETATMYEFKLQSF   85 (95)
T ss_dssp             CCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEEEECTTCCEEEECSCCTTCEEEEEEEEE
T ss_pred             CCCCCcCeEEEEeCCCEEEEEEEeeeeccCCcccccceeEeeeeecceeeeeeccCCceeEEEEeeccCCeEEEEEEEEE
Confidence            345566789999999999999986543 4566999999999876541111112334567889999999999999999999


Q ss_pred             cCCcc
Q 004714          419 NGTTE  423 (734)
Q Consensus       419 ~~~~e  423 (734)
                      ++.|+
T Consensus        86 n~~G~   90 (95)
T d2ibga1          86 SAASA   90 (95)
T ss_dssp             CSSCB
T ss_pred             eCCcc
Confidence            99874

>d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=1.7e-09  Score=89.13  Aligned_cols=89  Identities=22%  Similarity=0.260  Sum_probs=69.1

Q ss_pred             CCCCcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEE
Q 004714          337 QGSNVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKV  415 (734)
Q Consensus       337 q~~~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkv  415 (734)
                      +...+|++..+++.+|+++||+|-++..+  ...|.||+|+|+..... ...  ...+....+.+.|+||.|.|+|.|+|
T Consensus         2 ~~~~vp~P~~l~v~~~t~~si~l~W~~p~--~~~i~~Y~v~~~~~~~~~~~~--~~~~~~~~t~~~i~~L~p~t~Y~~~V   77 (95)
T d2fnba_           2 RGSEVPQLTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGIPIF--EDFVDSSVGYYTVTGLEPGIDYDISV   77 (95)
T ss_dssp             CSCCSCCCTTCEEECCCSSCEEEECCCCC--CSSCCEEEEEEEEETSCCEEE--EEECCSSCSEEEECCCCTTSEEEEEE
T ss_pred             CcCCcCcCCCeEEEEEcCCEEEEEEEecC--CceEEeEEEEEEEeeccceEE--EEEeCCCCeEEEEecccCCEEEEEEE
Confidence            45567788899999999999999997543  45699999999988664 211  12345667899999999999999999


Q ss_pred             EeccCCccCcceee
Q 004714          416 VSSNGTTELGRCEI  429 (734)
Q Consensus       416 vsF~~~~elg~~E~  429 (734)
                      .++++.|+=....+
T Consensus        78 ~a~~~~g~s~p~~~   91 (95)
T d2fnba_          78 ITLINGGESAPTTL   91 (95)
T ss_dssp             EEEETTEECCCCEE
T ss_pred             EEEeCCcEeCCEEE
Confidence            99998775333333

>d1fnha3 b.1.2.1 (A:183-271) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=6.1e-09  Score=84.78  Aligned_cols=88  Identities=20%  Similarity=0.181  Sum_probs=68.5

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          342 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       342 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      .++--+++.+++++|++|..+..   ..+|.||.|.|+..... .......+....+.+.|.||.|.|+|.|+|.++++.
T Consensus         2 daP~nl~v~~~~~~s~~l~W~~p---~~~i~~Y~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~n~~   77 (89)
T d1fnha3           2 DAPSNLRFLATTPNSLLVSWQPP---RARITGYIIKYEKPGSP-PREVVPRPRPGVTEATITGLEPGTEYTIYVIALKNN   77 (89)
T ss_dssp             CCCEEEEEEEEETTEEEEEEECC---SSCCSEEEEEEECTTSC-CEECTTCCCTTCCEEEEESCCTTCEEEEEEEEESSS
T ss_pred             ccCcCCEEEEecCCEEEEEEeCC---CcCCceEEEEEeeccCC-ccEEEEEcCCCccEEEEEeeeCCCEEEEEEEEEcCC
Confidence            45667999999999999999854   25699999999987654 111222345667899999999999999999999998


Q ss_pred             ccCcceeeEEec
Q 004714          422 TELGRCEIWFST  433 (734)
Q Consensus       422 ~elg~~E~k~~T  433 (734)
                      |+-....++..|
T Consensus        78 g~S~p~~~~~~T   89 (89)
T d1fnha3          78 QKSEPLIGRKKT   89 (89)
T ss_dssp             CEEEEEEEEEEC
T ss_pred             CEeCCEEEEEEC
Confidence            875555555554

>d1tdqa2 b.1.2.1 (A:94-185) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.84  E-value=4.1e-09  Score=85.43  Aligned_cols=89  Identities=17%  Similarity=0.137  Sum_probs=69.1

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCC-CceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          342 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPAR-PTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       342 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~e-pt~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      .++..+++.+++++||+|-.+..   ..+|.||.|.|+........+ ........++.+.|.||.|.|+|.|+|.++++
T Consensus         2 daP~~l~v~~~~~~sv~v~W~~p---~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~   78 (92)
T d1tdqa2           2 DAPKNLRVGSRTATSLDLEWDNS---EAEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMN   78 (92)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECC---SSCCSEEEEEEEETTCCCCEEEEEECCSSSEEEEEECSCCTTCEEEEEEEEEET
T ss_pred             ccCcCCEEEEecCCEEEEEEEec---CCcccceEEEEEEcCCCcceeeEEEecCCCeeEEEECCccCCCEEEEEEEEEeC
Confidence            45667999999999999998654   356999999999876542211 12233556788999999999999999999999


Q ss_pred             CccCcceeeEEec
Q 004714          421 TTELGRCEIWFST  433 (734)
Q Consensus       421 ~~elg~~E~k~~T  433 (734)
                      .|+=....+.+.|
T Consensus        79 ~g~s~p~~~~~~T   91 (92)
T d1tdqa2          79 SKQSIPATMNART   91 (92)
T ss_dssp             TEECCCEEEEEEC
T ss_pred             CCEecCEEEEEEC
Confidence            9876666777666

>d1qr4a2 b.1.2.1 (A:88-175) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.83  E-value=8.3e-09  Score=84.55  Aligned_cols=83  Identities=22%  Similarity=0.260  Sum_probs=67.0

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          342 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       342 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      .++-.++|.+|+++|++|-++..   ..++.||.|+|+.....  ..-+..+....+++.|.||.|.|+|.|+|.++++.
T Consensus         2 ~~P~~l~v~~v~~~s~~l~W~~~---~~~~~~Y~i~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~   76 (88)
T d1qr4a2           2 GSPKGISFSDITENSATVSWTPP---RSRVDSYRVSYVPITGG--TPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGF   76 (88)
T ss_dssp             CCCSCEEEESCCSSCEEEEECCC---SSCCSEEEEEEEETTCC--CCEEEEEETTCCEEEECSCCSSCEEEEEEEEEETT
T ss_pred             cCCcceEEEEecCCEEEEEEEcc---cEeeceEEEEEEeccCC--ceEEEEecCCccEEEECCCCCCCEEEEEEEEEeCC
Confidence            45567999999999999999754   35799999999998764  22345668889999999999999999999999998


Q ss_pred             ccCcceee
Q 004714          422 TELGRCEI  429 (734)
Q Consensus       422 ~elg~~E~  429 (734)
                      |+=-....
T Consensus        77 g~s~p~~~   84 (88)
T d1qr4a2          77 EESEPISG   84 (88)
T ss_dssp             EECCCEEE
T ss_pred             CCcCCEEE
Confidence            75333333

>d1tena_ b.1.2.1 (A:) Tenascin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=1e-08  Score=83.77  Aligned_cols=89  Identities=20%  Similarity=0.241  Sum_probs=71.1

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          341 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       341 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      |.++-.+++.+|+++||+|.....   ..++.||.|.|+..... ...-...+....+.+.|.||.|.|+|.|+|.++++
T Consensus         2 ld~P~~l~v~~~s~~s~~l~W~~p---~~~~~~y~v~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~   77 (90)
T d1tena_           2 LDAPSQIEVKDVTDTTALITWFKP---LAEIDGIELTYGIKDVP-GDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRG   77 (90)
T ss_dssp             CCCCEEEEEESCCSSCEEEEEECC---SSCCSEEEEEEEETTCT-TCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEET
T ss_pred             CCCCCCcEEEEecCCEEEEEEEeC---ceEeccEEEEEEEcCCC-ceeEEEEecCCcceeeEeeecCCCEEEEEEEEEeC
Confidence            345667999999999999999743   35799999999987653 11123356778899999999999999999999999


Q ss_pred             CccCcceeeEEec
Q 004714          421 TTELGRCEIWFST  433 (734)
Q Consensus       421 ~~elg~~E~k~~T  433 (734)
                      .|+-...+..+.|
T Consensus        78 ~g~s~~~~~~~~T   90 (90)
T d1tena_          78 DMSSNPAKETFTT   90 (90)
T ss_dssp             TEECCCEEEEEEC
T ss_pred             CCEeCCEEEEEEC
Confidence            9987777766655

>d1fnfa3 b.1.2.1 (A:1327-1415) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.2e-08  Score=83.24  Aligned_cols=87  Identities=25%  Similarity=0.248  Sum_probs=67.7

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          342 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       342 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      .++-.+++.+|+++||+|..+...   ..+.||+|.|+....... .-...+...++.+.|.||.|.|+|.|+|.++++.
T Consensus         2 d~P~~l~v~~vt~~sv~l~W~~p~---~~~~~Y~i~~~~~~~~~~-~~~~~v~~~~~~~~i~~L~p~t~Y~~~V~a~~~~   77 (89)
T d1fnfa3           2 DSPTGIDFSDITANSFTVHWIAPR---ATITGYRIRHHPEHFSGR-PREDRVPHSRNSITLTNLTPGTEYVVSIVALNGR   77 (89)
T ss_dssp             CCCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECSCCSSC-CEEEEEETTCCEEEEESCCTTCEEEEEEEEEETT
T ss_pred             ccCcCCEEEEecCCEEEEEEEeCC---CEEeeEEEEEEECCCCCc-eEEEEECCCccEEEECCCcccCEEEEEEEEEcCC
Confidence            355679999999999999997642   469999999998765422 1233567788999999999999999999999988


Q ss_pred             ccCcceeeEEe
Q 004714          422 TELGRCEIWFS  432 (734)
Q Consensus       422 ~elg~~E~k~~  432 (734)
                      |+=....++..
T Consensus        78 g~s~p~~~~~~   88 (89)
T d1fnfa3          78 EESPLLIGQQS   88 (89)
T ss_dssp             EECCCEEEEEE
T ss_pred             cCcCCEEEEEE
Confidence            76444444443

>d1fnfa2 b.1.2.1 (A:1236-1326) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=1.4e-08  Score=82.76  Aligned_cols=90  Identities=17%  Similarity=0.197  Sum_probs=69.1

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          341 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       341 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      +|++--+++.+++++||+|.++...  ...|.||.|.|+........ -...+....+.+.|.||.|.|+|.|+|.++++
T Consensus         1 vPpP~~l~~~~~~~~sv~l~W~~p~--~~~~~~y~v~y~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~   77 (91)
T d1fnfa2           1 VPPPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLVRYSPVKNEEDV-AELSISPSDNAVVLTNLLPGTEYVVSVSSVYE   77 (91)
T ss_dssp             CCCCEEEEEESCCSSCEEEEEECCT--TCCCSEEEEEEEETTCTTCC-EEEEECTTCCEEEECSCCTTCEEEEEEEEEET
T ss_pred             CccCCceEEEEeCCCEEEEEEEecC--CCCcceeEEEEEECCCCccE-EEEEeCCCceEEEEeceeCCCEEEEEEEEEcC
Confidence            3566789999999999999997543  34699999999988765211 12345667889999999999999999999998


Q ss_pred             CccCcceeeEEec
Q 004714          421 TTELGRCEIWFST  433 (734)
Q Consensus       421 ~~elg~~E~k~~T  433 (734)
                      .|+=-..-++..|
T Consensus        78 ~g~S~p~~~~~~T   90 (91)
T d1fnfa2          78 QHESTPLRGRQKT   90 (91)
T ss_dssp             TEECCCEEEEEEC
T ss_pred             CCCCCCEEEEEEC
Confidence            8864444444444

>d1qr4a1 b.1.2.1 (A:1-87) Tenascin {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.77  E-value=1.6e-08  Score=82.27  Aligned_cols=85  Identities=21%  Similarity=0.239  Sum_probs=68.9

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ++-.+++.+++++||+|-.+...   ..+.||.|+|+.....   .....+....+.+.|.||.|.|+|.|+|.+|++.+
T Consensus         2 aP~~l~v~~~t~~sv~v~W~~p~---~~~~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~~~   75 (87)
T d1qr4a1           2 NPKDLEVSDPTETTLSLRWRRPV---AKFDRYRLTYVSPSGK---KNEMEIPVDSTSFILRGLDAGTEYTISLVAEKGRH   75 (87)
T ss_dssp             CCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECTTCC---EEEEEECTTCSEEEEESCCSSCEEEEEEEEESSSC
T ss_pred             cCcCcEEEEecCCEEEEEEECCC---CCcceeEEEeecCCcc---eeEEeCCCCcCEEEECCCCcCCEEEEEEEEEcCCC
Confidence            34578999999999999998643   5699999999987653   23345678899999999999999999999999998


Q ss_pred             cCcceeeEEec
Q 004714          423 ELGRCEIWFST  433 (734)
Q Consensus       423 elg~~E~k~~T  433 (734)
                      +=....+.+.|
T Consensus        76 ~s~~~~~~~~T   86 (87)
T d1qr4a1          76 KSKPTTIKGST   86 (87)
T ss_dssp             BCCCEEEEEEC
T ss_pred             CccCEEEEEEc
Confidence            75555666555

>d1j8ka_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=1.7e-08  Score=82.64  Aligned_cols=88  Identities=22%  Similarity=0.229  Sum_probs=69.9

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 004714          341 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  419 (734)
Q Consensus       341 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  419 (734)
                      |.++-.++|.+|+.+||+|-.+...   .++.||.++|+..... ...  ..++...++.+.|+||.|.|+|.|+|.+++
T Consensus         2 ~d~P~~l~v~~vt~~sv~l~W~~p~---~~~~~y~i~~~~~~~~~~~~--~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~   76 (94)
T d1j8ka_           2 IDRPKGLAFTDVDVDSIKIAWESPQ---GQVSRYRVTYSSPEDGIHEL--FPAPDGEEDTAELQGLRPGSEYTVSVVALH   76 (94)
T ss_dssp             CCCCCCCEEEEEETTEEEEECCCCS---SCCSCEEEEEEETTTEEEEE--CCCCCSSCCEEEECSCCCCSEEEEEEEECS
T ss_pred             CCCCCCCEEEEecCCEEEEEEeCCC---ccccceEEEEEeecCCCceE--EEecCCCccEEEECCCCCCCEEEEEEEEEe
Confidence            4566789999999999999997542   4699999999987664 221  223456788999999999999999999999


Q ss_pred             CCccCcceeeEEec
Q 004714          420 GTTELGRCEIWFST  433 (734)
Q Consensus       420 ~~~elg~~E~k~~T  433 (734)
                      +.|+-......+.|
T Consensus        77 ~~g~S~p~~~~~~T   90 (94)
T d1j8ka_          77 DDMESQPLIGTQST   90 (94)
T ss_dssp             SSCCCCCEEEEEEC
T ss_pred             CCCCcCCEEEEEEE
Confidence            98876666666665

>d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=2.6e-08  Score=81.76  Aligned_cols=91  Identities=20%  Similarity=0.220  Sum_probs=73.6

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          341 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       341 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      |.++-.+++.+++++||.|-++..   ...+.||.|+|+......   -...+....+.+.|.||.|.|+|.|+|.++++
T Consensus         2 l~~P~~l~~~~~~~~sv~l~W~~p---~~~~~~Y~v~~~~~~~~~---~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~   75 (93)
T d2cuma1           2 LEAPRDLEAKEVTPRTALLTWTEP---PVRPAGYLLSFHTPGGQT---QEILLPGGITSHQLLGLFPSTSYNARLQAMWG   75 (93)
T ss_dssp             CCCCEEEEEESCCSSCEEEEEECC---SSCCSEEEEEEECTTSCE---EEEEECSSCSEEEECSCCTTCEEEEEEEEEBT
T ss_pred             cCcCCCCEEEEeCCCEEEEEEEcc---ccccccEEEEEEcccccc---EEEEECCCccEEEEeCccCCCEEEEEEEEEeC
Confidence            456667999999999999999754   246999999998865431   12245667788999999999999999999999


Q ss_pred             CccCcceeeEEecCccc
Q 004714          421 TTELGRCEIWFSTGSSR  437 (734)
Q Consensus       421 ~~elg~~E~k~~T~s~e  437 (734)
                      .|.-....+.+.|..+.
T Consensus        76 ~g~s~~~~~~~tT~g~~   92 (93)
T d2cuma1          76 QSLLPPVSTSFTTGGLR   92 (93)
T ss_dssp             TBCCCCEEEEEECCCSC
T ss_pred             CCCCCCEEEEEEeCCee
Confidence            99888888888887654

>d1fnha2 b.1.2.1 (A:93-182) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=4.2e-08  Score=80.39  Aligned_cols=87  Identities=21%  Similarity=0.269  Sum_probs=68.3

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          342 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       342 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      .++-.+++.+++++|++|.+....   .++.||.|+|+........  ..++...++.+.|.||+|.|+|.|+|.++++.
T Consensus         3 spP~~l~v~~~~~~si~v~W~~p~---~~~~~Y~i~~~~~~~~~~~--~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~   77 (90)
T d1fnha2           3 SPPRRARVTDATETTITISWRTKT---ETITGFQVDAVPANGQTPI--QRTIKPDVRSYTITGLQPGTDYKIYLYTLNDN   77 (90)
T ss_dssp             CCCEEEEEEEECSSEEEEEEECCS---SCCCCEEEEEEESSSSCCE--EEECCTTCSEEEEESCCTTCEEEEEEEEEETT
T ss_pred             CcCCCCEEEEecCCEEEEEEECCC---CCCceeEEEEEEccCCceE--EEecCCCccEEEeCCCCCCcEEEEEEEEEeCC
Confidence            456679999999999999997542   5799999999987653221  33456779999999999999999999999998


Q ss_pred             ccCcceeeEEec
Q 004714          422 TELGRCEIWFST  433 (734)
Q Consensus       422 ~elg~~E~k~~T  433 (734)
                      |+--.......|
T Consensus        78 g~s~p~~~~~~T   89 (90)
T d1fnha2          78 ARSSPVVIDAST   89 (90)
T ss_dssp             EECCCEEEEEEC
T ss_pred             CCcCCEEEEEEC
Confidence            875544444444

>d1fnha1 b.1.2.1 (A:3-92) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=6.7e-08  Score=78.39  Aligned_cols=88  Identities=22%  Similarity=0.227  Sum_probs=72.7

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          342 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       342 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      |++-.+++.+|+++||+|-....   ...+.||.++|+..... .......+....+++.|+||.|.|+|.|||.++++.
T Consensus         1 PpP~~l~~~~v~~~si~l~W~~p---~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~~   76 (90)
T d1fnha1           1 PAPTDLKFTQVTPTSLSAQWTPP---NVQLTGYRVRVTPKEKT-GPMKEINLAPDSSSVVVSGLMVATKYEVSVYALKDT   76 (90)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECC---SSCCSEEEEEEEESSSC-SCCCEEEECTTCCEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CCCCCEEEEEecCCEEEEEEEcc---ceeccceEEEEEeeeCC-CceEEEEeCCCCeEEEEecccCceEEEEEEEEEeCC
Confidence            45667999999999999999653   35799999999877654 233345678899999999999999999999999999


Q ss_pred             ccCcceeeEEec
Q 004714          422 TELGRCEIWFST  433 (734)
Q Consensus       422 ~elg~~E~k~~T  433 (734)
                      |+=-..++.+.|
T Consensus        77 g~s~~~~~~~~T   88 (90)
T d1fnha1          77 LTSRPAQGVVTT   88 (90)
T ss_dssp             EECCCEEEEEEC
T ss_pred             CCcCCEeEEEEc
Confidence            887777877766

>d2dn7a1 b.1.2.1 (A:8-101) Receptor-type tyrosine-protein phosphatase F, PTPRF {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase F, PTPRF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.67  E-value=5.6e-08  Score=79.66  Aligned_cols=88  Identities=22%  Similarity=0.250  Sum_probs=69.6

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      +..+....+++++++|.+.........|.||.|.||.....  ......+....+.+.|.||.|.|.|.|||.+|+..|.
T Consensus         3 ~P~~~~~~~~~~sv~l~W~pP~~~~g~i~~Y~i~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~   80 (94)
T d2dn7a1           3 RPTMMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADEA--RPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKNRAGL   80 (94)
T ss_dssp             CCEEEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTCS--SCEEEEEETTCCEEEEECCCTTCEEEEEEEEEETTEE
T ss_pred             CCcEeEEEEeCCEEEEEEeCCCCCCCceEEEEEEEEEcCCC--CcEEEEcCCCccEEEEEccCCeeEEEEEEEEEcCCcC
Confidence            34567788999999999987654566899999999987653  2224456777889999999999999999999999996


Q ss_pred             CcceeeEEec
Q 004714          424 LGRCEIWFST  433 (734)
Q Consensus       424 lg~~E~k~~T  433 (734)
                      =-.+|..+.|
T Consensus        81 g~~s~~~~~T   90 (94)
T d2dn7a1          81 GEEFEKEIRT   90 (94)
T ss_dssp             EEEEEEEEEC
T ss_pred             CCCccEEEee
Confidence            4456666665

>d2djsa1 b.1.2.1 (A:8-102) Ephrin type-B receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-B receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.65  E-value=9.8e-08  Score=77.72  Aligned_cols=87  Identities=15%  Similarity=0.199  Sum_probs=68.7

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  424 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  424 (734)
                      ..+++.+++++||+|-....+.....|.||.+.||.....  .....+.....+.+.|.||.|.|+|.|||.+++..|. 
T Consensus         5 ~~l~~~~~t~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~-   81 (95)
T d2djsa1           5 PIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHN--EFNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAGY-   81 (95)
T ss_dssp             SCCEEEEECSSEEEEECCCCSCCSSCEEEEEEEEEETTSC--STTCEEEEESSSEEEEESCCTTCEEEEEEEEEESSCE-
T ss_pred             CccEEEeecCCEEEEEEEECCCCCcceEEeeeeeeeeccC--cceeEeecCCccEEEEeecCCccEEEEEEEEEcCCCC-
Confidence            3688999999999999988765556899999999987654  2233455667889999999999999999999999883 


Q ss_pred             cce--eeEEecC
Q 004714          425 GRC--EIWFSTG  434 (734)
Q Consensus       425 g~~--E~k~~T~  434 (734)
                      |.+  .+.+.|.
T Consensus        82 g~~S~~~~~~T~   93 (95)
T d2djsa1          82 GKFSGKMCFQTL   93 (95)
T ss_dssp             EEECCCEEEECC
T ss_pred             CCCCCCEEEEeC
Confidence            543  4455553

>d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=1.1e-07  Score=78.30  Aligned_cols=88  Identities=19%  Similarity=0.206  Sum_probs=71.2

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  424 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  424 (734)
                      ..+++.+++.+||+|.+...+.....|.||.|.||......  .....+...++.+.|.||.|.|.|.|||.+++..|.=
T Consensus         5 ~~~~~~~~~~~sv~l~W~~p~~~~~~I~~Y~i~~~~~~~~~--~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~N~~G~s   82 (93)
T d2vkwa2           5 KLEGQMGEDGNSIKVNLIKQDDGGSPIRHYLVRYRALSSEW--KPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKS   82 (93)
T ss_dssp             EEEEEECTTSSCEEEEEECCCCTTSCCCEEEEEEEETTSCC--CCCEEECTTCCEEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred             ccCEeEEcCCCEEEEEeeCCCCCcCceEEEEEEeeecCcce--eeeeeccCCceEEEEeccccceEEEEEEEEEcCCCCc
Confidence            46789999999999999887655567999999999876642  2344567788999999999999999999999998854


Q ss_pred             cceeeEEecC
Q 004714          425 GRCEIWFSTG  434 (734)
Q Consensus       425 g~~E~k~~T~  434 (734)
                      -.+++.+.|.
T Consensus        83 ~ps~~~~~T~   92 (93)
T d2vkwa2          83 KAAHFVFRTA   92 (93)
T ss_dssp             CCEEEEEECC
T ss_pred             CCEeEEEEec
Confidence            4456666664

>d1fnaa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=8.3e-08  Score=78.56  Aligned_cols=77  Identities=16%  Similarity=0.222  Sum_probs=61.6

Q ss_pred             EEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccCcc
Q 004714          347 VKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELGR  426 (734)
Q Consensus       347 ~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg~  426 (734)
                      +++.+|+++|++|-.+...   .++.||+|+|+.....-. .-...+..+.+.+.|.||.|.|+|.|+|.+++..|+-..
T Consensus         3 l~v~~~t~~sv~l~W~~p~---~~~~~Y~v~~~~~~~~~~-~~~~~~~~~~t~~~l~~L~p~t~Y~~~V~a~~~~g~s~~   78 (91)
T d1fnaa_           3 LEVVAATPTSLLISWDAPA---VTVRYYRITYGETGGNSP-VQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRGDSPA   78 (91)
T ss_dssp             CEEEEECSSCEEEECCCCS---SCCSEEEEEEEETTCCSC-CEEEEEETTCCEEEECSCCTTCEEEEEEEEECTTCCSSC
T ss_pred             CEEEEeCCCEEEEEEEccc---eEecEEEEEEEcCCCCce-eEEEEeCCCccEEEeCCCCCCCEEEEEEEEEeCCccCCC
Confidence            6788999999999997542   468999999998765411 112346788999999999999999999999999887443


Q ss_pred             e
Q 004714          427 C  427 (734)
Q Consensus       427 ~  427 (734)
                      .
T Consensus        79 ~   79 (91)
T d1fnaa_          79 S   79 (91)
T ss_dssp             S
T ss_pred             c
Confidence            3

>d1x5ga1 b.1.2.1 (A:8-110) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=1.3e-07  Score=78.97  Aligned_cols=87  Identities=22%  Similarity=0.268  Sum_probs=67.1

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ++..+++..++++||+|..+........|.||+|+||.....    ....+....+.+.|+||.|.|+|.|+|.+++..|
T Consensus        13 ~P~~l~v~~~s~~si~l~W~~P~~~~g~i~~Y~v~~~~~~~~----~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G   88 (103)
T d1x5ga1          13 PAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTD----KEQDVDVSSHSYTINGLKKYTEYSFRVVAYNKHG   88 (103)
T ss_dssp             CCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCC----CCCCEEECSSEEEECSCCTTCEEEEEEEEECSSC
T ss_pred             cCCCcEEEEccCCEEEEEEECCcCCCccEEEEEEEEEeCCCc----eeEEEeccccEEecCCCCCCCEEEEEEEEEcCCc
Confidence            344689999999999999986544455799999999987654    1223456788999999999999999999999987


Q ss_pred             cCcc-e-eeEEecC
Q 004714          423 ELGR-C-EIWFSTG  434 (734)
Q Consensus       423 elg~-~-E~k~~T~  434 (734)
                      . |. + .+.+.|.
T Consensus        89 ~-g~~S~~v~v~T~  101 (103)
T d1x5ga1          89 P-GVSTPDVAVRTL  101 (103)
T ss_dssp             C-CCBCCCCCEECC
T ss_pred             C-cCCCCCEEEEcC
Confidence            4 43 2 3555553

>d1fnfa1 b.1.2.1 (A:1142-1235) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=1e-07  Score=79.31  Aligned_cols=87  Identities=17%  Similarity=0.153  Sum_probs=64.4

Q ss_pred             ccCceEEEEEeecee-EEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          342 IVPNMVKFEDVRATS-LTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       342 ~~~~~~rFE~vt~tS-v~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      .++..++|.+++.+| |+|-++..  ...+|.||+|.|+.........-+..+...++.+.|.||.|.|+|.|+|.++++
T Consensus         3 ~PP~~l~v~~~~~ts~i~v~W~~p--~~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~   80 (94)
T d1fnfa1           3 SPPTNLHLEANPDTGVLTVSWERS--TTPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKD   80 (94)
T ss_dssp             CCCEEEEEEECSSSSCEEEEEECC--SCSSCCEEEEEEEETTTCSSCCEEEEECTTCCEEECCCCCTTSCEEEEEEEEET
T ss_pred             CcCcCcEEEEecCCCEEEEEeeCC--CCCCeeEEEEEEEEecccCceEEEEEeCCCccEEEECCCCCCCEEEEEEEEEcC
Confidence            355679999998765 88988654  445699999999976543211222345667899999999999999999999998


Q ss_pred             CccCcceeeE
Q 004714          421 TTELGRCEIW  430 (734)
Q Consensus       421 ~~elg~~E~k  430 (734)
                      .|+-......
T Consensus        81 ~g~s~p~s~t   90 (94)
T d1fnfa1          81 DKESVPISDT   90 (94)
T ss_dssp             TEECCCEEEE
T ss_pred             CCEeCCEEEE
Confidence            8865444443

>d1wfoa1 b.1.2.1 (A:8-124) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=1.9e-07  Score=79.55  Aligned_cols=89  Identities=21%  Similarity=0.303  Sum_probs=67.3

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  424 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  424 (734)
                      -.+++..++++||.|.++........|.||.|+||.....-...-.-++....+.+.|.||.|.|.|.|||.++|..|.=
T Consensus        25 ~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g  104 (117)
T d1wfoa1          25 MGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANTATVEVLAPSARQYTATGLKPESVYLFRITAQTRKGWG  104 (117)
T ss_dssp             CCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSCCCEEEECTTCCEEEEESCCSSSEEEEEEEEECSSCEE
T ss_pred             CCcEEEEecCCEEEEEEECCCCCCCceEEEeeeeeeccCCCceEeEEecCCceEEEEECCCCCCCEEEEEEEEECCCcCC
Confidence            45899999999999999866544567999999999876652223333455667889999999999999999999987732


Q ss_pred             cceeeEEec
Q 004714          425 GRCEIWFST  433 (734)
Q Consensus       425 g~~E~k~~T  433 (734)
                      -.+|...+|
T Consensus       105 ~~S~~~~~t  113 (117)
T d1wfoa1         105 EAAEALVVT  113 (117)
T ss_dssp             EEEEEEEEC
T ss_pred             CCcCCEEEE
Confidence            234444443

>d1ujta_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=1.5e-07  Score=82.11  Aligned_cols=81  Identities=16%  Similarity=0.082  Sum_probs=61.9

Q ss_pred             eeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceee--ecCCceeEeecCCcceeeeEEEEeccCCccCccee
Q 004714          352 VRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTL--FAPNTRFVVTGLCPATEYQFKVVSSNGTTELGRCE  428 (734)
Q Consensus       352 vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~--~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg~~E  428 (734)
                      |+++||.|-.+... ..+.|.||+|+||..... -..++..+-  ....+.++|.||.|.|+|.|||.+|+..|+=-.++
T Consensus        27 ~s~tsi~v~W~~p~-~~~~i~gY~v~y~~~~~~~~~~~~~~~~v~~~~~~s~~i~~L~p~t~Y~f~V~A~n~~G~G~~S~  105 (120)
T d1ujta_          27 LTPTTVQVTWTVDR-QPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSE  105 (120)
T ss_dssp             CBTTEEEEEEEESS-CCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCCEEEEESCCSSEEEEEEEEEESSSCCCCCCC
T ss_pred             eCCCeEEEEecCCC-CCCcEEEEEEEeeecccCCCCcceEEEEeccCceeEEEECCCCCCCEEEEEEEEEeCCcCcCCCC
Confidence            68999999998664 346799999999998766 445554432  23477899999999999999999999988633445


Q ss_pred             eE-Eec
Q 004714          429 IW-FST  433 (734)
Q Consensus       429 ~k-~~T  433 (734)
                      .. +.|
T Consensus       106 ~~~~~T  111 (120)
T d1ujta_         106 SKTVRT  111 (120)
T ss_dssp             CEEEEE
T ss_pred             CEEEEe
Confidence            43 444

>d1x5la1 b.1.2.1 (A:8-105) Ephrin type-A receptor 8 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 8
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=1.2e-07  Score=79.12  Aligned_cols=87  Identities=26%  Similarity=0.349  Sum_probs=68.0

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      +..+++..++++||+|...........|.||.|+|+..... ..   ..++..+.+.+.|+||.|.|.|.|||.++++.|
T Consensus         7 p~~~~~~~~s~~si~v~W~~P~~~~g~i~~Y~v~y~~~~~~~~~---~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~~G   83 (98)
T d1x5la1           7 VVVIRQERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQS---YSTLKAVTTRATVSGLKPGTRYVFQVRARTSAG   83 (98)
T ss_dssp             CCCEECSCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSS---CEEEEESSSEEEECSCCTTCEEEECEEEEETTE
T ss_pred             CCceEEEeccCCEEEEEEECCCCCCCCEEEEEEEeeccccccee---eEEecCCceEEEECCCCCCCEEEEEEEEEcCCC
Confidence            34688999999999999987654456799999999987654 22   224566789999999999999999999999988


Q ss_pred             cCcc--eeeEEecC
Q 004714          423 ELGR--CEIWFSTG  434 (734)
Q Consensus       423 elg~--~E~k~~T~  434 (734)
                       +|.  -++.+.|.
T Consensus        84 -~g~~S~~v~~~T~   96 (98)
T d1x5la1          84 -CGRFSQAMEVETG   96 (98)
T ss_dssp             -ECCCCCCEEEECC
T ss_pred             -CcCCCCCEEEEcC
Confidence             353  34555553

>d1qg3a1 b.1.2.1 (A:1126-1217) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=2.3e-07  Score=75.45  Aligned_cols=88  Identities=14%  Similarity=0.100  Sum_probs=68.4

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          341 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       341 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      |.++.-++++.++++||.|-.+..   ..++.||.|.|+.....  ..-...+....+.+.|.||.|.|+|.|||.+++.
T Consensus         2 l~aP~n~~~~~~s~~si~l~W~~p---~~~~~~Y~i~y~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~   76 (92)
T d1qg3a1           2 LGAPQNPNAKAAGSRKIHFNWLPP---SGKPMGYRVKYWIQGDS--ESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGA   76 (92)
T ss_dssp             CCCCEEEEEEECSTTCEEEEEECC---SSCCCEEEEEEEETTSC--GGGCEEEEESSSEEEECSCCTTCEEEEEEEEECS
T ss_pred             CCcCCCCEEEEccCCEEEEEEEec---CCCccceEEeeeecccc--ccEEEEecCCccEEEECCCCCCcEEEEEEEEEeC
Confidence            456778999999999999999754   35689999999987654  2223456678889999999999999999999999


Q ss_pred             CccCcce-eeEEec
Q 004714          421 TTELGRC-EIWFST  433 (734)
Q Consensus       421 ~~elg~~-E~k~~T  433 (734)
                      .|.=-.+ .+.+.|
T Consensus        77 ~G~g~~S~~~~~~T   90 (92)
T d1qg3a1          77 QGEGPYSSLVSCRT   90 (92)
T ss_dssp             SCBCCCCCCEEEEC
T ss_pred             CcCcCCCCCEEEEc
Confidence            8752222 344544

>d1x5za1 b.1.2.1 (A:8-109) Receptor-type tyrosine-protein phosphatase delta, PTPRD {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Receptor-type tyrosine-protein phosphatase delta, PTPRD
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=2.6e-07  Score=76.89  Aligned_cols=84  Identities=24%  Similarity=0.325  Sum_probs=65.7

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      +..|+...++++||+|-....  ..+.|.||.|.||.....   ....+...+.+.+.|+||.|.|+|.|||.+++..|.
T Consensus        14 P~~~~~~~~~~~si~l~W~~p--~~~~i~~Y~i~y~~~~~~---~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~   88 (102)
T d1x5za1          14 PLNFKAEPESETSILLSWTPP--RSDTIANYELVYKDGEHG---EEQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGL   88 (102)
T ss_dssp             CEEEEEECSSSSEEEEEEECC--SCCCCCEEEECBEESSSC---CCBCCEECSSSEEEEECCCTTCEEEECEEEECSSCE
T ss_pred             CCCeEEEEccCCEEEEEEECC--CCCCccceEEEEEeCCCC---ceEEEEcCCcCEEEECCCCCCCEEEEEEEEEcCCCE
Confidence            456999999999999998754  345799999999987654   223345567889999999999999999999999885


Q ss_pred             Ccce--eeEEec
Q 004714          424 LGRC--EIWFST  433 (734)
Q Consensus       424 lg~~--E~k~~T  433 (734)
                       |.+  ++.+.|
T Consensus        89 -g~~S~~v~~~T   99 (102)
T d1x5za1          89 -GASTAEISART   99 (102)
T ss_dssp             -EEECCCEEEEC
T ss_pred             -eCCCCCEEEEc
Confidence             433  345555

>d1x4ya1 b.1.2.1 (A:8-108) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.52  E-value=2.5e-07  Score=76.48  Aligned_cols=93  Identities=14%  Similarity=0.090  Sum_probs=72.5

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 004714          342 IVPNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  418 (734)
Q Consensus       342 ~~~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  418 (734)
                      .++--++.+.|++++|+|.+....+  ....|.||.|.||..... ....-+.++..+...+.|.||.|.|.|.|||.+|
T Consensus         3 ~~P~~~~~~~~s~tsi~v~W~~~~~~~~~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~   82 (101)
T d1x4ya1           3 AGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYDIKMQCF   82 (101)
T ss_dssp             SCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred             CCCcccEEEEEcCCEEEEEEecCcccccccceEEEEEEeeeccceeeeeeeEEEEcCCeeEEEEcCCCCCCEEEEEEEEE
Confidence            4566789999999999999986653  457899999999988765 4444444567788899999999999999999999


Q ss_pred             cCCccCccee-eEEecC
Q 004714          419 NGTTELGRCE-IWFSTG  434 (734)
Q Consensus       419 ~~~~elg~~E-~k~~T~  434 (734)
                      +..|+=--++ +.+.|+
T Consensus        83 n~~G~s~~S~~~~~~T~   99 (101)
T d1x4ya1          83 NEGGESEFSNVMICETK   99 (101)
T ss_dssp             CTTCCCCCCCCEEEECC
T ss_pred             cCCCCCCCCCcEEEEcc
Confidence            9988633333 344443

>d1wfna1 b.1.2.1 (A:8-113) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=2.4e-07  Score=77.56  Aligned_cols=86  Identities=20%  Similarity=0.203  Sum_probs=65.6

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      +..+++.+++++||+|.+.........|.||+|.|+..... .......+....+.+.|+||.|.|.|.|||.+++..|.
T Consensus        14 p~~l~~~~~~~~sv~l~W~~P~~~ng~i~~Y~i~~~~~~~~-~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~   92 (106)
T d1wfna1          14 VGHLSFSEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRT-NTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQ   92 (106)
T ss_dssp             CSCCEEESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCG-GGCCCEEECSSCCEEEEESCCTTCEEEEEEEEECSSCE
T ss_pred             CCCcEEEEecCCEEEEEEECCCCCCCcEEeEEEEEEECCCC-cceEEEecCCCeeEEEEccCCCCCEEEEEEEEECCCCC
Confidence            34689999999999999986554455699999999887653 11233355666789999999999999999999999875


Q ss_pred             CcceeeE
Q 004714          424 LGRCEIW  430 (734)
Q Consensus       424 lg~~E~k  430 (734)
                      =-.++..
T Consensus        93 g~~s~~~   99 (106)
T d1wfna1          93 GQVSAST   99 (106)
T ss_dssp             EEEEEEE
T ss_pred             cCCcCCE
Confidence            2233333

>d1x5fa1 b.1.2.1 (A:8-114) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=3.3e-07  Score=77.54  Aligned_cols=90  Identities=18%  Similarity=0.241  Sum_probs=66.7

Q ss_pred             CceEEEEEeeceeEEEEeCcCC-CCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          344 PNMVKFEDVRATSLTVVLGSED-PSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~-~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      +--|++.+++++||+|-..... .....|.||.++||..... ......+.....+.++|.||.|.|.|.|||.+++..|
T Consensus        14 P~~l~~~~~~~~sv~lsW~~P~~~~~~~i~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~p~t~Y~~rV~A~n~~G   92 (107)
T d1x5fa1          14 PRDVVASLVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIA-RERVENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHG   92 (107)
T ss_dssp             CEEEEEEEECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCC-CCEEEECSSTTCSEEEECSCCTTCEEEEEEEEECSSC
T ss_pred             CCccEEEEecCCEEEEEEECCccCCCCceEEEEEEEEeCCCC-ceEEEEEeCCCccEEEecCCCCCCEEEEEEEEEeCCC
Confidence            3459999999999999997643 2355799999999976553 2222334455678999999999999999999999988


Q ss_pred             cCc-ceeeEEecC
Q 004714          423 ELG-RCEIWFSTG  434 (734)
Q Consensus       423 elg-~~E~k~~T~  434 (734)
                      .-- .-++.+.|.
T Consensus        93 ~g~~S~~i~v~T~  105 (107)
T d1x5fa1          93 SGESSAPLRVETQ  105 (107)
T ss_dssp             EEEECCCEEEECC
T ss_pred             CcCCCCCEEEECC
Confidence            422 234666654

>d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.45  E-value=2.4e-07  Score=77.07  Aligned_cols=85  Identities=13%  Similarity=0.141  Sum_probs=69.0

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      +-.+++.+|+++|+.|-+....   ..|.||.|.|+.....   .-+..+....+.+.|.||.|.|+|.|+|.++++.+.
T Consensus         4 P~~l~~~~~t~~si~l~W~~p~---~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~~~   77 (102)
T d2cuha1           4 PTQLRALNLTEGFAVLHWKPPQ---NPVDTYDIQVTAPGAP---PLQAETPGSAVDYPLHDLVLHTNYTATVRGLRGPNL   77 (102)
T ss_dssp             CEEEECCCCSSSCEEEEEECCS---SCCSEEEEEEECSSSC---CEEEEEETTCSEEEECSCCSSSEEEEEEEEEETTEE
T ss_pred             CCccEEEEeCCCEEEEEEEeee---ccceeeEEEEEecccc---ceeeeeeeeeeeEEEccEEeeEEEEEEEEEEeCCCC
Confidence            3468999999999999997542   4699999999876543   223456778899999999999999999999999887


Q ss_pred             CcceeeEEecC
Q 004714          424 LGRCEIWFSTG  434 (734)
Q Consensus       424 lg~~E~k~~T~  434 (734)
                      -...++.+.|.
T Consensus        78 s~~~~~~~~T~   88 (102)
T d2cuha1          78 TSPASITFTTG   88 (102)
T ss_dssp             CCCEEEEEESC
T ss_pred             cCCEEEEEECC
Confidence            77777777774

>d1tdqa1 b.1.2.1 (A:1-93) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.45  E-value=6.1e-07  Score=73.69  Aligned_cols=88  Identities=20%  Similarity=0.196  Sum_probs=70.8

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          342 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       342 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      .++-.+++.+|+++|++|-.+..   ...+.||++=|+....... .-..++..+.+++.|.||.|.|+|.|+|.++++.
T Consensus         5 ~~P~~l~v~~v~~~si~v~W~~p---~~~~~~y~i~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~v~V~a~~~~   80 (93)
T d1tdqa1           5 DGPTQILVRDVSDTVAFVEWTPP---RAKVDFILLKYGLVGGEGG-KTTFRLQPPLSQYSVQALRPGSRYEVSISAVRGT   80 (93)
T ss_dssp             CCCEEEEEEEECSSCEEEEEECC---SSCCSEEEEEEEESSSSCC-CEEEEECTTCSEEEECSCCTTCEEEEEEEEEETT
T ss_pred             CcCCCCEEEEeCCCEEEEEEEcc---ccCCCceEEEEEeccCcce-eeEEEeCCCceEEEEeCcccceEEEEEEEEEeCC
Confidence            35567999999999999999643   3579999998887766411 1234566778899999999999999999999999


Q ss_pred             ccCcceeeEEec
Q 004714          422 TELGRCEIWFST  433 (734)
Q Consensus       422 ~elg~~E~k~~T  433 (734)
                      |+=...+..+.|
T Consensus        81 g~s~~~~~~~tT   92 (93)
T d1tdqa1          81 NESDASSTQFTT   92 (93)
T ss_dssp             EECCCEEEEEEC
T ss_pred             CCcCCEEEEEEC
Confidence            987777777766

>d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.42  E-value=6.5e-07  Score=72.71  Aligned_cols=83  Identities=17%  Similarity=0.250  Sum_probs=66.9

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          341 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       341 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      |.++--+++.+++++|++|.....   ...+.||.|=|+.....   +....+....+++.|.||.|.|.|.|+|.++++
T Consensus         1 l~~P~nl~v~~~~~~s~~l~W~~p---~~~~~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~~L~p~t~Y~v~V~a~~~   74 (86)
T d1tdqa3           1 LDSPRDLMVTASSETSISLIWTKA---SGPIDHYRITFTPSSGI---SSEVTVPRDRTSYTLTDLEPGAEYIISITAERG   74 (86)
T ss_dssp             CCCCEEEEEEEECSSCEEEEEECC---CSCCSEEEEEEECSSSC---CEEEEEESSCSEEEECCCCTTCCEEEEEEEEET
T ss_pred             CccCCCCEEEEecCCEEEEEEeCC---CCCccceEEEEeccccc---ceEEEeCCCccEEEECCCccccEEEEEEEEEcC
Confidence            345667999999999999999764   35799999988866542   334566788999999999999999999999998


Q ss_pred             CccCcceee
Q 004714          421 TTELGRCEI  429 (734)
Q Consensus       421 ~~elg~~E~  429 (734)
                      .++-..+++
T Consensus        75 ~~~s~p~~~   83 (86)
T d1tdqa3          75 RQQSLESTV   83 (86)
T ss_dssp             TEECCCEEE
T ss_pred             CCEECCEEe
Confidence            886555444

>d1x5ka1 b.1.2.1 (A:8-118) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=4.6e-07  Score=75.03  Aligned_cols=89  Identities=16%  Similarity=0.181  Sum_probs=66.8

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 004714          346 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  424 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  424 (734)
                      .+...++++++|+|-.+........|.||.+.|+..... ....-...+....+.+.|.||.|.|+|.|||.+++..|.=
T Consensus        19 ~v~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g   98 (111)
T d1x5ka1          19 TVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMG   98 (111)
T ss_dssp             EEEECSSCTTCEEEEEECCSCCSSCCCEEEEEEESCSSSCTTTSEEEEESTTCSEEEECSCCSSSEEEEEEEEECSSCBC
T ss_pred             EEEEecCCCCEEEEEEEccccCCCceeeeEEeeeecCCCCcceeEEEEeCCCeeEEEECCCCCCCEEEEEEEEEcCCCCc
Confidence            344556788999999987655567899999999987766 4444445566777889999999999999999999988732


Q ss_pred             ccee-eEEecC
Q 004714          425 GRCE-IWFSTG  434 (734)
Q Consensus       425 g~~E-~k~~T~  434 (734)
                      -.+| +.+.|.
T Consensus        99 ~~S~~v~~~T~  109 (111)
T d1x5ka1          99 PMSEAVQFRTP  109 (111)
T ss_dssp             CCCCCEEEECC
T ss_pred             CCCCCEEEECC
Confidence            2334 444453

>d1x5xa1 b.1.2.1 (A:8-103) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=1e-06  Score=71.29  Aligned_cols=85  Identities=20%  Similarity=0.201  Sum_probs=65.5

Q ss_pred             eEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 004714          346 MVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  424 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  424 (734)
                      .+++.+++++||+|-...... ....|.+|.+++|.....  ..-..+.....+.+.|+||.|.|+|.|||.+++..|. 
T Consensus         6 ~~~v~~~~~~si~l~W~~p~~~~~~~~~~y~~~~~~~~~~--~~~~~~~~~~~~~~~v~~L~p~t~Y~~rV~A~n~~G~-   82 (96)
T d1x5xa1           6 SPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSG--YGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSEGK-   82 (96)
T ss_dssp             CCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSS--CCCEEEEEESCSEEEEESCCSSCEEEEEEEEECSSCE-
T ss_pred             CCEEEEecCCEEEEEEEeecccCcceEeeeEEEeeeccce--eeeEEeecCCCCEEEECCCCCCCEEEEEEEEEcCCcE-
Confidence            467889999999999987543 456799999999876554  2223455677889999999999999999999999874 


Q ss_pred             cce--eeEEec
Q 004714          425 GRC--EIWFST  433 (734)
Q Consensus       425 g~~--E~k~~T  433 (734)
                      |.+  .+.+.|
T Consensus        83 s~~S~~~~~~T   93 (96)
T d1x5xa1          83 SNPSEVVEFTT   93 (96)
T ss_dssp             EEECCCEEEEC
T ss_pred             eCCCCCEEEEe
Confidence            432  345554

>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1568 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=5e-07  Score=77.35  Aligned_cols=81  Identities=22%  Similarity=0.244  Sum_probs=60.8

Q ss_pred             Ccc-cCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC--CCCCCceeeecCCceeEeecCCcceeeeEEEE
Q 004714          340 NVI-VPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG--FPARPTCTLFAPNTRFVVTGLCPATEYQFKVV  416 (734)
Q Consensus       340 ~l~-~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~--y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvv  416 (734)
                      .+| ++-.+++.+|+++||+|-+.........|.||.|+||.....  +.   +.....+.+++.|.||.|.|.|.|||.
T Consensus        14 ~~P~pP~~~~v~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~---~~~~~~~~~~~~v~~L~p~t~Y~frV~   90 (117)
T d1uema_          14 DLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQ---TVANHVKTTLYTVRGLRPNTIYLFMVR   90 (117)
T ss_dssp             CSCBCCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEE---EEEEEECSSEEEECSCCTTCEEEEEEE
T ss_pred             ccCcCCCCCEEEEccCCEEEEEEECCCcCCCCeEEEEEEEeccCCceeeE---EeccccccccceECCCCCCCEEEEEEE
Confidence            344 344689999999999999975444455799999988765432  11   111234678999999999999999999


Q ss_pred             eccCCcc
Q 004714          417 SSNGTTE  423 (734)
Q Consensus       417 sF~~~~e  423 (734)
                      ++|..|.
T Consensus        91 A~N~~G~   97 (117)
T d1uema_          91 AINPQGL   97 (117)
T ss_dssp             EEETTEE
T ss_pred             EEeCCcC
Confidence            9998764

>d2b5ib2 b.1.2.1 (B:104-207) Interleukin-2 receptor beta chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-2 receptor beta chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.38  E-value=1.1e-06  Score=72.07  Aligned_cols=87  Identities=15%  Similarity=0.193  Sum_probs=72.3

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCC--CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 004714          341 VIVPNMVKFEDVRATSLTVVLGSEDPS--PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  418 (734)
Q Consensus       341 l~~~~~~rFE~vt~tSv~vvL~~~~~s--~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  418 (734)
                      |.++-.++..+|+++||+|-.......  ...+.+|.+-|+.................++.+.|.||.|.|.|.|||-+.
T Consensus         3 l~pP~~l~v~~~~~~s~~l~W~~p~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rVra~   82 (104)
T d2b5ib2           3 LMAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVK   82 (104)
T ss_dssp             CCCCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCEEECSCCCEEEECSCCTTCEEEEEEEEE
T ss_pred             cCCCCCcEEEEEeCCEEEEEEccccccccccceeEEEEEEecccccceeeeEEecCCCcEEEEECCCCCCCEEEEEEEEE
Confidence            456778999999999999999777643  466789999999887665555566677788999999999999999999999


Q ss_pred             cCCccCcce
Q 004714          419 NGTTELGRC  427 (734)
Q Consensus       419 ~~~~elg~~  427 (734)
                      ++.|..|.|
T Consensus        83 ~~~g~~g~w   91 (104)
T d2b5ib2          83 PLQGEFTTW   91 (104)
T ss_dssp             ESCCSSCCC
T ss_pred             ECCCCCCCC
Confidence            988877764

>d1x5aa1 b.1.2.1 (A:8-101) Ephrin type-A receptor 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ephrin type-A receptor 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.36  E-value=1.1e-06  Score=73.23  Aligned_cols=73  Identities=22%  Similarity=0.300  Sum_probs=60.6

Q ss_pred             ceEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          345 NMVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      --+++++++++||+|-.+.... ....+.+|.+.|+...+.      .......++++|+||+|.|.|.|||.+|+..|+
T Consensus         7 ~~L~~~~~~~~si~vsW~~p~~~~~~~~i~Y~i~~~~~~~~------~~~~~~~t~~~i~~L~p~t~Y~~rV~A~n~~G~   80 (94)
T d1x5aa1           7 LSLKLVKKEPRQLELTWAGSRPRNPGGNLSYELHVLNQDEE------WHQMVLEPRVLLTKLQPDTTYIVRVRTLTPLGP   80 (94)
T ss_dssp             CCCCEEEEETTEEEEECCCCCSSCCSSCCEEEEEEECSSCE------EEEEESSSEEEEESCCSSCEEEEEEEEECSSSC
T ss_pred             CceEEEEcCCCEEEEEEecccCCCCCcEEEEEEEEecCCce------EEEeeccCEEEECCCCCCCEEEEEEEEEcCCcC
Confidence            3578899999999999987653 566778999999987653      223345789999999999999999999999985

>d1qg3a2 b.1.2.1 (A:1218-1320) Integrin beta-4 subunit {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Integrin beta-4 subunit
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1.4e-06  Score=71.78  Aligned_cols=89  Identities=19%  Similarity=0.304  Sum_probs=67.7

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCc---eeeecCCceeEeecCCcceeeeEEEEecc
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPT---CTLFAPNTRFVVTGLCPATEYQFKVVSSN  419 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept---~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  419 (734)
                      +-.+++..++++||+|.++........|.||.|.|+..... -...+.   .+....++.+.|.||.|.|+|.|||.+++
T Consensus         6 P~~~~~~~~~~~sv~v~W~~P~~~~g~i~~Y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n   85 (103)
T d1qg3a2           6 PGRLAFNVVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARN   85 (103)
T ss_dssp             CCCCEEEEEETTEEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBCSCCEEEEECCTTCCEEEECCCCTTCCEEEEEEEEE
T ss_pred             CCCcEEEEecCCEEEEEEEECccCCCCceEEEEEeeccccccccccceEEEEecCCCceEEEEeecCCCCEEEEEEEEEc
Confidence            34689999999999999997665567899999999988665 222222   22356678899999999999999999999


Q ss_pred             CCccCc-ceeeEEec
Q 004714          420 GTTELG-RCEIWFST  433 (734)
Q Consensus       420 ~~~elg-~~E~k~~T  433 (734)
                      ..| .| ..|+.+.+
T Consensus        86 ~~G-~g~~s~~~v~~   99 (103)
T d1qg3a2          86 GAG-WGPEREAIINL   99 (103)
T ss_dssp             TTE-ECCCEEEEECG
T ss_pred             CCc-cCCCcccccEE
Confidence            877 44 34444433

>d1x4za1 b.1.2.1 (A:8-115) Brother of CDO precursor (BOC) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Brother of CDO precursor (BOC)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.33  E-value=7.1e-07  Score=75.84  Aligned_cols=79  Identities=18%  Similarity=0.103  Sum_probs=59.1

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      ..+++.+++++||+|-+.-.......|.||.|-||..... --..-+..+...++.+.|.||.|.|+|.|||.+++..|.
T Consensus        15 ~~~~v~~~~~~sv~l~W~p~~~~g~~I~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~   94 (108)
T d1x4za1          15 DRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYKFRVRALNMLGE   94 (108)
T ss_dssp             CCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEEEECTTCCEEEEESCCTTCEEEEEEEEEETTEE
T ss_pred             CCCEEEEccCCEEEEEEECCCCCCCccEEEEEEEEecCCCCceEEEEEeecCCccEEEECCCCCCCEEEEEEEEECCCcC
Confidence            3567889999999999953333345699999988876553 111122334556778999999999999999999987764

>d1x5ja1 b.1.2.1 (A:8-107) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=1.5e-06  Score=71.16  Aligned_cols=89  Identities=19%  Similarity=0.210  Sum_probs=65.1

Q ss_pred             cCceEEEEEeeceeEEEEeCcCC-C---CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 004714          343 VPNMVKFEDVRATSLTVVLGSED-P---SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  418 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~-~---s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  418 (734)
                      ++-.|++++++++||.|..+... +   ....+.+|.+.|+........  ..++....+.+.|.||.|.|+|.|||.+|
T Consensus         4 pP~~v~~~~~s~tsi~v~W~~p~~~~~~~~~~~~~y~v~~~~~~~~~~~--~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~   81 (100)
T d1x5ja1           4 PPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK--YKNANATTLSYLVTGLKPNTLYEFSVMVT   81 (100)
T ss_dssp             CCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCC--CEECCBCSSEEEEESCCTTCEECCEEEEE
T ss_pred             CCcCeEEEEecCCEEEEEEcCCccccccceeeEEEEEEEeeecCCCcce--eEecCCCccEEEECCCCCCCEEEEEEEEE
Confidence            34569999999999999997643 1   235678899888877654222  22345567899999999999999999999


Q ss_pred             cCCccCccee-eEEec
Q 004714          419 NGTTELGRCE-IWFST  433 (734)
Q Consensus       419 ~~~~elg~~E-~k~~T  433 (734)
                      ++.|+=.-++ +.+.|
T Consensus        82 n~~g~s~~S~~~~~~T   97 (100)
T d1x5ja1          82 KGRRSSTWSMTAHGTT   97 (100)
T ss_dssp             CSSCBCCCCCCCCEEC
T ss_pred             eCCcCcCCCCeEEEEe
Confidence            9887633333 44444

>d1cfba1 b.1.2.1 (A:610-709) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

Probab=98.31  E-value=1.2e-06  Score=72.44  Aligned_cols=77  Identities=13%  Similarity=0.199  Sum_probs=58.2

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          346 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      .++++ +++++++|-+.........|.||.+.||..................+.+.|.||.|.|.|.|||.++++.|.
T Consensus        11 ~~~v~-~~~~sv~lsW~pp~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~frV~A~n~~G~   87 (100)
T d1cfba1          11 LTGIT-CQADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVVQMSPWANYTFRVIAFNKIGA   87 (100)
T ss_dssp             EEEEE-ECSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEEECCSSEEEEEEEEEEETTEE
T ss_pred             CcEEE-EcCCEEEEEEcCCcccccceEEEEEEEecCCCCceeeEEeeecCCceEEEEecCCCCCEEEEEEEEEeCCcC
Confidence            46664 688899998875544456799999999977654222333334556788999999999999999999998774

>d1x5ha1 b.1.2.1 (A:8-126) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=5.4e-07  Score=76.86  Aligned_cols=88  Identities=20%  Similarity=0.255  Sum_probs=67.7

Q ss_pred             CceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      +-.|++..++++||.|-++....  ....|.||+|.||..... ...+  .++...++.++|+||.|.|.|.|||.+|+.
T Consensus        15 P~~v~~~~~~~~si~v~W~~p~~~~~ng~i~~Y~v~y~~~~~~~~~~~--~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~   92 (119)
T d1x5ha1          15 PQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSDVTE--TLVSGTQLSQLIEGLDRGTEYNFRVAALTI   92 (119)
T ss_dssp             CEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEEEEC--CBCCTTCCEEEEECCCSSCEEEEECEEEET
T ss_pred             CcCeEEEEecCcEEEEEEEcccccCCCCCEEEEEEEEeecccccceee--eecCCCccEEEeCCCCCCCEEEEEEEEEcC
Confidence            45799999999999999987653  235799999999987664 2211  134556788999999999999999999999


Q ss_pred             CccCcce--eeEEecC
Q 004714          421 TTELGRC--EIWFSTG  434 (734)
Q Consensus       421 ~~elg~~--E~k~~T~  434 (734)
                      .|. |.+  .+.+.|.
T Consensus        93 ~G~-G~~S~~~~~~T~  107 (119)
T d1x5ha1          93 NGT-GPATDWLSAETF  107 (119)
T ss_dssp             TEE-EEECCCEEEECC
T ss_pred             CcC-CCCCCCEEEEeC
Confidence            885 533  3566664

>d2haza1 b.1.2.1 (A:489-589) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neural cell adhesion molecule 1, NCAM
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=3.9e-07  Score=75.95  Aligned_cols=82  Identities=15%  Similarity=0.160  Sum_probs=59.2

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCC-CCCcceEEEEeeecCCC-CCCCCcee-eecCCceeEeecCCcceeeeEEEEec
Q 004714          342 IVPNMVKFEDVRATSLTVVLGSEDPS-PGNIISYTLWHRRAHEG-FPARPTCT-LFAPNTRFVVTGLCPATEYQFKVVSS  418 (734)
Q Consensus       342 ~~~~~~rFE~vt~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~-y~~ept~~-~~~p~~r~~vs~L~P~TEY~fkvvsF  418 (734)
                      |.+..+..-+++++||+|.+...... ...|.+|.|.||..... ....-..+ ....++.+.|+||.|.|.|.|||.++
T Consensus         3 P~~P~~~~~~~~~~sv~l~W~~P~~~gg~~I~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~   82 (101)
T d2haza1           3 PSSPSIDQVEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAAL   82 (101)
T ss_dssp             CCCCEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCEEEEEEEEE
T ss_pred             CcCCccCEEEeeCCEEEEEEeCCCcCccccEEEEEEEEeecCCcceeeeeeeeecccceeEEEecCCCCCeEEEEEEEEE
Confidence            34445666678999999999876543 34699999999987654 21111111 12345789999999999999999999


Q ss_pred             cCCcc
Q 004714          419 NGTTE  423 (734)
Q Consensus       419 ~~~~e  423 (734)
                      +..|.
T Consensus        83 N~~G~   87 (101)
T d2haza1          83 NGKGL   87 (101)
T ss_dssp             ETTEE
T ss_pred             eCCcC
Confidence            98774

>d1wf5a1 b.1.2.1 (A:8-115) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.29  E-value=4.8e-07  Score=76.60  Aligned_cols=81  Identities=17%  Similarity=0.246  Sum_probs=60.2

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          342 IVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       342 ~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      |.+..+.+.+++++||+|-..........|.||.|.||.....+. .....+....+.+.|+||.|.|.|.|||.+++..
T Consensus        14 P~~p~~~~~~~~~~sv~l~W~~P~~~~~~I~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~N~~   92 (108)
T d1wf5a1          14 PEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENNAPWT-VLLASVDPKATSVTVKGLVPARSYQFRLCAVNDV   92 (108)
T ss_dssp             CSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTTCCCE-EEESSCCTTCCEEEEESCCTTCEEEEEEEEEESS
T ss_pred             CCCCEEEEEeccCCEEEEEEECCCCCCCccEEEEEEEEeccCCce-EEeeeecCCccEEEECCCCCCCEEEEEEEEEcCC
Confidence            334467888999999999987654334569999999998765311 1111234456789999999999999999999987


Q ss_pred             cc
Q 004714          422 TE  423 (734)
Q Consensus       422 ~e  423 (734)
                      |.
T Consensus        93 G~   94 (108)
T d1wf5a1          93 GK   94 (108)
T ss_dssp             CE
T ss_pred             cC
Confidence            73

>d1bpva_ b.1.2.1 (A:) Type I titin module {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Type I titin module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=1.2e-06  Score=72.64  Aligned_cols=79  Identities=18%  Similarity=0.260  Sum_probs=61.7

Q ss_pred             eEEEEEeeceeEEEEeCcCC-CCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          346 MVKFEDVRATSLTVVLGSED-PSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~-~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      .+++.+|+++||+|-..... .-...|.+|.+.++..... ..  .......+...+.|+||.|.|+|.|||.+++..|+
T Consensus         8 ~p~~~~~t~~sv~lsW~~P~~~~g~~i~~y~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~n~~G~   85 (104)
T d1bpva_           8 KPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWL--KANFSNILENEFTVSGLTEDAAYEFRVIAKNAAGA   85 (104)
T ss_dssp             CCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCE--ECCCSCCCSSEEEECSCCSSCCEEEEEEEECTTSC
T ss_pred             CCEEEEecCCEEEEEEEeccccCcceEEEEEEEeeccccccee--EEEeeccceeEEEEcCCCCCCEEEEEEEEEECCCC
Confidence            45678999999999998653 2345699999999987665 21  11123456788999999999999999999999998


Q ss_pred             Ccc
Q 004714          424 LGR  426 (734)
Q Consensus       424 lg~  426 (734)
                      .|.
T Consensus        86 ~s~   88 (104)
T d1bpva_          86 ISP   88 (104)
T ss_dssp             EEE
T ss_pred             CCC
Confidence            774

>d1wfta_ b.1.2.1 (A:) Host cell factor 2, HCF-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Host cell factor 2, HCF-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.26  E-value=2.1e-06  Score=73.80  Aligned_cols=91  Identities=14%  Similarity=0.224  Sum_probs=67.7

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCC---C-----------ceeeecCCceeEeecCCccee
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPAR---P-----------TCTLFAPNTRFVVTGLCPATE  410 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~e---p-----------t~~~~~p~~r~~vs~L~P~TE  410 (734)
                      -.|+++. +++||+|..+........|+||.|+||.........   +           ...+..+.+++.|.+|.|.|.
T Consensus        12 ~~v~v~~-~~~si~l~W~~P~~~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~   90 (123)
T d1wfta_          12 STVRISK-NVDGIHLSWEPPTSPSGNILEYSAYLAIRTAQMQDNPSQLVFMRIYCGLKTSCTVTAGQLANAHIDYTSRPA   90 (123)
T ss_dssp             EEEEEEE-CSSEEEEEEECCSSCCSSCCCEEEEEEECSSCCCSCSCCCEEEEEEEESCSEEEEEHHHHTTCCCBCSSSCE
T ss_pred             cccEEEe-CCCEEEEEecCchhcCCceEEEEEEEEECCCCCccccceeeeEEEecCCceeEeecCCccEEEEcCCCCCCE
Confidence            3577765 789999999976644557999999998876652111   1           133455678889999999999


Q ss_pred             eeEEEEeccCCccCcceeeEEecCcc
Q 004714          411 YQFKVVSSNGTTELGRCEIWFSTGSS  436 (734)
Q Consensus       411 Y~fkvvsF~~~~elg~~E~k~~T~s~  436 (734)
                      |.|||.++|..|.=-.+|++.++-..
T Consensus        91 Y~frV~A~N~~G~Gp~S~~~~~~t~~  116 (123)
T d1wfta_          91 IVFRISAKNEKGYGPATQIRWLQGNS  116 (123)
T ss_dssp             EEEEEEEBSSSSBCCCEEEEEECCSC
T ss_pred             EEEEEEEecCCcCCCCCCcEEEEecC
Confidence            99999999998843456888776533

>d2dtge3 b.1.2.1 (E:468-592) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=5.3e-07  Score=77.35  Aligned_cols=78  Identities=12%  Similarity=0.146  Sum_probs=61.0

Q ss_pred             eEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCC-CCC---CCc------------------eeeecCCceeEe
Q 004714          346 MVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEG-FPA---RPT------------------CTLFAPNTRFVV  402 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~-y~~---ept------------------~~~~~p~~r~~v  402 (734)
                      .|.+.+++++||+|-.+.... ....|.||.|.||..... -..   .+.                  .......+.+.|
T Consensus         7 nl~~~~~sstsv~lsW~pP~~~~~~~i~gY~I~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (125)
T d2dtge3           7 KFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHPGWLM   86 (125)
T ss_dssp             CCSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCCEEEE
T ss_pred             EEEEEEecCCEEEEEEeCCCccCCCcEEEEEEEEEECCCCceEEEeeccccCCcccceecccCcceeeeecCCccCEEEE
Confidence            577889999999999986653 357899999999987654 221   111                  122346788999


Q ss_pred             ecCCcceeeeEEEEeccCCcc
Q 004714          403 TGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       403 s~L~P~TEY~fkvvsF~~~~e  423 (734)
                      +||.|.|.|.|+|.+|+..|+
T Consensus        87 ~~L~p~T~Y~~~V~A~n~~G~  107 (125)
T d2dtge3          87 RGLKPWTQYAIFVKTLVTFSD  107 (125)
T ss_dssp             CSCCSSCBCCBEEEECCCCCS
T ss_pred             CCCccCCEEEEEEEEEeCCCc
Confidence            999999999999999999997

>d1x3da1 b.1.2.1 (A:8-112) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=2e-06  Score=71.82  Aligned_cols=88  Identities=19%  Similarity=0.283  Sum_probs=68.0

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      +..++..++++++|+|.+.........|.+|.|.+|.....  ..-..+...+++.+.|.+|.|.|+|.|||.++++.|.
T Consensus        14 P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~Y~i~~~~~~~~--~~~~~~~~~~~~~~~~~~L~p~t~Y~frV~A~N~~G~   91 (105)
T d1x3da1          14 PNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGN--GEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGT   91 (105)
T ss_dssp             CCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSS--SCCEEEEEESCSEEEEESCCTTCEEEEECCEEESSCB
T ss_pred             CCCCEEEEccCCEEEEEEECCCCCcCccEEEEEEEecCCCc--ceeEEEecCCccEEEecCCcCCcEEEEEEEEECCCeE
Confidence            44578899999999999987654556799999999866543  3445556778999999999999999999999999884


Q ss_pred             Ccce-eeEEec
Q 004714          424 LGRC-EIWFST  433 (734)
Q Consensus       424 lg~~-E~k~~T  433 (734)
                      =..+ .+.+.|
T Consensus        92 s~~S~~~~~~T  102 (105)
T d1x3da1          92 SGFSEEVLYYT  102 (105)
T ss_dssp             CCCCCCEEEEC
T ss_pred             cCCCCcEEEEC
Confidence            2222 445554

>d1x5ya1 b.1.2.1 (A:8-105) Myosin binding protein C, fast-type {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Myosin binding protein C, fast-type
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.22  E-value=1.5e-06  Score=72.53  Aligned_cols=78  Identities=22%  Similarity=0.215  Sum_probs=59.5

Q ss_pred             CceEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      +..+.+.+++++||+|-+.-... -...|.||.|=||..... +..  ........+.|.|+||.|.|+|.|||.+++..
T Consensus         5 P~~~~v~~~~~~sv~l~W~pP~~~~~~~i~~Y~V~~~~~~~~~~~~--~~~~~~~~~~~~v~~L~~~~~Y~frV~A~n~~   82 (98)
T d1x5ya1           5 PQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVP--ANKEPVERCGFTVKDLPTGARILFRVVGVNIA   82 (98)
T ss_dssp             CEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEE--SSSSCBSSSEEEEECCCTTCCEEEEEEEEETT
T ss_pred             CcCcEEEEccCCEEEEEEECCCcCCCCCceEEEEEEEecCcceeEE--eeeecCceeEEEECCCcCCeEEEEEEEEECCC
Confidence            34688999999999999975433 245699999988776554 211  11234567899999999999999999999877


Q ss_pred             cc
Q 004714          422 TE  423 (734)
Q Consensus       422 ~e  423 (734)
                      |.
T Consensus        83 G~   84 (98)
T d1x5ya1          83 GR   84 (98)
T ss_dssp             EE
T ss_pred             cC
Confidence            63

>d1x4xa1 b.1.2.1 (A:8-100) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=3.2e-06  Score=68.94  Aligned_cols=73  Identities=18%  Similarity=0.191  Sum_probs=60.0

Q ss_pred             EEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          347 VKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       347 ~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      +++..++++||+|-.+........|.||.|.++.....+    ..++....+.+.|+||.|.|+|.|||.+++..|.
T Consensus         7 ~~v~~~s~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~----~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~   79 (93)
T d1x4xa1           7 PQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSM----QICYCGPGLSYEIKGLSPATTYYCRVQALSVVGA   79 (93)
T ss_dssp             CCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSC----CEEEEESCSEEEEESCCSSCEEEEEEEEECSSCC
T ss_pred             CEEEEeCCCeEEEEEEecccCCCeeEEEEEEEccCCCcc----eEeecCCccEEEEcccceeeEEEEEEEEEECCcC
Confidence            456789999999999866544567999999998765532    2356778999999999999999999999998874

>d2cuia1 b.1.2.1 (A:6-106) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Tenascin-X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=4.2e-06  Score=68.70  Aligned_cols=86  Identities=17%  Similarity=0.209  Sum_probs=64.2

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCC------ceeeecCCceeEeecCCcceeeeEEEEe
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARP------TCTLFAPNTRFVVTGLCPATEYQFKVVS  417 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ep------t~~~~~p~~r~~vs~L~P~TEY~fkvvs  417 (734)
                      -.+++.+|+++||+|-++-   ...++.+|.|-|+..... ....+      ...+......+.|.||+|.|.|.|+|-+
T Consensus         8 ~~l~v~~~t~~sv~v~W~p---p~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~~~V~a   84 (101)
T d2cuia1           8 SQLSVTDVTTSSLRLNWEA---PPGAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSGTLYSLTLYG   84 (101)
T ss_dssp             CCCEEESCCSSCEEEECCC---CTTSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEETTCCEEEECSCCTTCEEEEEEEE
T ss_pred             CCcEEEEECCCEEEEEEEe---ccccccceEEEEEecCCCceeeccCCcceeEeecccceeEEEeCCCCcCCEEEEEEEE
Confidence            4689999999999999963   236799999988877644 21111      1234567788999999999999999999


Q ss_pred             ccCCccCcceeeEEec
Q 004714          418 SNGTTELGRCEIWFST  433 (734)
Q Consensus       418 F~~~~elg~~E~k~~T  433 (734)
                      |++.|.=...++...|
T Consensus        85 ~~~~g~g~~~~~~~~T  100 (101)
T d2cuia1          85 LRGPHKADSIQGTART  100 (101)
T ss_dssp             ECSSSEEEEEEEEEEC
T ss_pred             EeCCcEeCCeEEEeEE
Confidence            9998864444544444

>d1wfua_ b.1.2.1 (A:) Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type 3 and ankyrin repeat domains 1 protein, FANK1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.20  E-value=1.7e-06  Score=73.91  Aligned_cols=88  Identities=19%  Similarity=0.110  Sum_probs=64.6

Q ss_pred             eEEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          346 MVKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      .+++.+|+++||+|.++.... ....|.||.|.||..... -...-.-+.....+.++|.||+|.|+|.|||.+++..|.
T Consensus        21 ~p~v~~vt~~sv~l~W~~P~~~~g~~i~~y~i~y~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~  100 (120)
T d1wfua_          21 PPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGYATRHVVEGLEPRTLYKFRLKVTSPSGE  100 (120)
T ss_dssp             CCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEEEESCSEEEEESCCTTCEEEEEEEEECSSSC
T ss_pred             CCEEeEecCCEEEEEEECCcccCcccccceeeeeeeecccccccceeeeccccccEEeCCCCCCCcEeeEEEEEEeCCcE
Confidence            345678999999999987543 356799999999864433 222223344566789999999999999999999999985


Q ss_pred             Ccc-ee-eEEecC
Q 004714          424 LGR-CE-IWFSTG  434 (734)
Q Consensus       424 lg~-~E-~k~~T~  434 (734)
                       |. +| +.+.|.
T Consensus       101 -s~~S~~~~~~T~  112 (120)
T d1wfua_         101 -YEYSPVVSVATT  112 (120)
T ss_dssp             -EEECCCEEEECC
T ss_pred             -eCCCCCEEEEeC
Confidence             43 34 455554

>d1va9a1 b.1.2.1 (A:8-116) Down syndrome cell adhesion molecule-like protein 1, DSCAML1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Down syndrome cell adhesion molecule-like protein 1, DSCAML1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=4e-06  Score=69.22  Aligned_cols=84  Identities=18%  Similarity=0.196  Sum_probs=64.8

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCC-CCCCCcee--eecCCceeEeecCCcceeeeEEEEe
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEG-FPARPTCT--LFAPNTRFVVTGLCPATEYQFKVVS  417 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~-y~~ept~~--~~~p~~r~~vs~L~P~TEY~fkvvs  417 (734)
                      ++-.|+.+.+++++|+|-......  ....|.||.+.||..... ........  .....+.+.|+||.|.|.|.|||.+
T Consensus        11 pP~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a   90 (109)
T d1va9a1          11 PPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQA   90 (109)
T ss_dssp             CCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEEESCCSSCCEEEEEEE
T ss_pred             CCcCcEEEEecCCEEEEEEcCCCCCCCCCcEEEEEEEEeeccccccceeeeeEEecCCCeeEEEECCCCcceEEEEEEEE
Confidence            344689999999999999987653  346899999999988766 32222222  2345689999999999999999999


Q ss_pred             ccCCccCcce
Q 004714          418 SNGTTELGRC  427 (734)
Q Consensus       418 F~~~~elg~~  427 (734)
                      ++..|. |.+
T Consensus        91 ~n~~G~-g~~   99 (109)
T d1va9a1          91 FNRAGT-GPS   99 (109)
T ss_dssp             EETTEE-CCC
T ss_pred             EcCCcC-CCC
Confidence            999885 543

>d1cfba2 b.1.2.1 (A:710-814) Neuroglian, two amino proximal Fn3 repeats {Drosophila melanogaster [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neuroglian, two amino proximal Fn3 repeats
species: Drosophila melanogaster [TaxId: 7227]

Probab=98.19  E-value=2e-06  Score=72.02  Aligned_cols=81  Identities=15%  Similarity=0.101  Sum_probs=60.4

Q ss_pred             CceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      +-.|+.+.+++++|+|-.....+  ....|.||+|-||.....-.....-+.....+.+.|.||.|.|+|.|||.+||..
T Consensus         8 P~~v~~~~~~~~si~v~W~p~~~~~~ng~i~~Y~I~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~N~~   87 (105)
T d1cfba2           8 PDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKVVAINDR   87 (105)
T ss_dssp             CSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEEECCTTCCEEEECSCCSSCEEEEEEEEEETT
T ss_pred             CcCeEEEEccCCeEEEEEeCCChhhcCceEEEEEEEeeeeccccceeEEEecCCCccEEEECCCCCCCEEEEEEEEEeCC
Confidence            44688999999999999976543  3457999999998775431111111223446789999999999999999999987


Q ss_pred             ccC
Q 004714          422 TEL  424 (734)
Q Consensus       422 ~el  424 (734)
                      |+=
T Consensus        88 G~g   90 (105)
T d1cfba2          88 GES   90 (105)
T ss_dssp             EEC
T ss_pred             cCC
Confidence            763

>d1v5ja_ b.1.2.1 (A:) KIAA1355 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA1355
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=1.1e-06  Score=74.10  Aligned_cols=76  Identities=17%  Similarity=0.254  Sum_probs=57.5

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          346 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      -+.+ ..++++|+|-.+........|.||.|.||........ -...+....+.+.|.||.|.|+|.|||.+|++.|.
T Consensus        13 ~~~~-~~t~~si~l~W~pp~~~~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n~~g~   88 (108)
T d1v5ja_          13 GLVA-VRTPRGVLLHWDPPELVPKRLDGYVLEGRQGSQGWEV-LDPAVAGTETELLVPGLIKDVLYEFRLVAFAGSFV   88 (108)
T ss_dssp             EEEE-EECSSSEEEEEECCSCCSSCCCBEEEEEEETTCCCEE-EEEEECSSCCEEECCCCCTTSCEECCBEEEETTEE
T ss_pred             CeEE-EEcCCEEEEEEEecccCCCceeEEEEEeeeeeeeeee-ccccccceeeeEEEEeccCCcEEEEEEEEEeCCCE
Confidence            3444 6799999999987654455799999999987543111 01134567889999999999999999999998875

>d1wisa1 b.1.2.1 (A:8-118) Sidekick 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Sidekick 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=2.5e-06  Score=71.09  Aligned_cols=80  Identities=15%  Similarity=0.108  Sum_probs=61.0

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCc----eeeecCCceeEeecCCcceeeeEEEEecc
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPT----CTLFAPNTRFVVTGLCPATEYQFKVVSSN  419 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept----~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  419 (734)
                      +..+++.+++++||+|-..........|.+|.+.|+...........    .......+.+.|.||.|.|.|.|||.+++
T Consensus        14 P~~~~~~~~~~~sv~l~W~pp~~~~~~i~~y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N   93 (111)
T d1wisa1          14 PTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVN   93 (111)
T ss_dssp             CEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCCTTSEECCCCEEEC
T ss_pred             CCCCEEEEcCCCEEEEEEeCCCCCCCceeEEEEeeeecccCCCcceeeeeeeecccceeEEEeCCCCCCCEEEEEEEEEc
Confidence            34689999999999999975544567799999999876655222211    12244567899999999999999999999


Q ss_pred             CCcc
Q 004714          420 GTTE  423 (734)
Q Consensus       420 ~~~e  423 (734)
                      ..|.
T Consensus        94 ~~G~   97 (111)
T d1wisa1          94 IVGT   97 (111)
T ss_dssp             SSCB
T ss_pred             CCcC
Confidence            8763

>d1ueya_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=2.4e-06  Score=73.12  Aligned_cols=85  Identities=16%  Similarity=0.137  Sum_probs=67.3

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      +..|++.+++.+||+|.+.........|.+|.+=|+.........-+.......+.+.|.||+|.|+|.|||.+|+..|+
T Consensus        20 P~~~~v~~~~~~sv~l~W~~p~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~n~~G~   99 (127)
T d1ueya_          20 PFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNSIGK   99 (127)
T ss_dssp             CEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTCTTCEEEEEEEESSCCEEEECCCTTCEECCEEEEEESSCB
T ss_pred             CCCcEEEEecCCeEEEEEeCCcccccceEeeeeeeccccccceeEEEEeecCCceEEEECCCccCCEEEEEEEEEcCCcC
Confidence            34689999999999999976655566789999988766554444445666778899999999999999999999999875


Q ss_pred             Cccee
Q 004714          424 LGRCE  428 (734)
Q Consensus       424 lg~~E  428 (734)
                      =..++
T Consensus       100 s~~S~  104 (127)
T d1ueya_         100 SLPSE  104 (127)
T ss_dssp             CCCCS
T ss_pred             cCCcC
Confidence            33334

>d2crza1 b.1.2.1 (A:8-104) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=4.5e-06  Score=69.78  Aligned_cols=70  Identities=16%  Similarity=0.229  Sum_probs=56.9

Q ss_pred             EeeceeEEEEeCcCCCC-CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          351 DVRATSLTVVLGSEDPS-PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       351 ~vt~tSv~vvL~~~~~s-~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      .++++||+|-....... ...|.+|.|.+|....   .+...+.....+.++|.||.|.|+|.|||.+++..|.
T Consensus        13 ~~~~~sv~l~W~~P~~~gg~~i~~Y~v~~~~~~~---~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~   83 (97)
T d2crza1          13 RPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEK---DEPREVYQGSEVECTVSSLLPGKTYSFRLRAANKMGF   83 (97)
T ss_dssp             CCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTS---CCCEEEEEESCSEEEEESCCTTCEEEECCEEECSSCB
T ss_pred             eeeCCEEEEEEeCCCcCCCCceeEEEEEEEcCcC---CceeEeecCCceEEEEcCCCCCEEEEEEEEEecCCeE
Confidence            57789999999865432 3469999999998765   3445566777889999999999999999999999874

>d1k85a_ b.1.2.1 (A:) Fibronectin type III domain from chitinase A1. {Bacillus circulans [TaxId: 1397]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type III domain from chitinase A1.
species: Bacillus circulans [TaxId: 1397]

Probab=98.08  E-value=5.9e-06  Score=67.58  Aligned_cols=73  Identities=16%  Similarity=0.299  Sum_probs=57.1

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      +-.+++.+|+++||+|-.+... ....|.||.+++...         .+.....+.|.|.||.|.|+|.|+|.+++..|.
T Consensus         7 P~~l~~~~~~~~sv~lsW~~p~-~~~~i~~Y~i~~~~~---------~~~~~~~t~~~~~~L~p~t~Y~~~V~A~n~~G~   76 (88)
T d1k85a_           7 PTNLASTAQTTSSITLSWTAST-DNVGVTGYDVYNGTA---------LATTVTGTTATISGLAADTSYTFTVKAKDAAGN   76 (88)
T ss_dssp             CEEEEEEEECSSCEEEEEECCS-CCSSEEEEEEEESSS---------EEEEESSSEEEECCCCSSCEEEEEEEEEETTTE
T ss_pred             CCCcEEEEecCCEEEEEEeCCC-CCCCEEEEEEEccce---------EEEecCCCEEEECCCCCCCEEEEEEEEEECCCC
Confidence            3468999999999999996432 234699999975322         234556789999999999999999999999885


Q ss_pred             Ccc
Q 004714          424 LGR  426 (734)
Q Consensus       424 lg~  426 (734)
                      .|.
T Consensus        77 ~s~   79 (88)
T d1k85a_          77 VSA   79 (88)
T ss_dssp             ECC
T ss_pred             cCC
Confidence            553

>d1owwa_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin, different Fn3 modules
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=5.1e-06  Score=69.96  Aligned_cols=86  Identities=17%  Similarity=0.205  Sum_probs=63.8

Q ss_pred             eEEEEEe--eceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          346 MVKFEDV--RATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       346 ~~rFE~v--t~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      .+.+-++  +++|++|-++..+  ...|.||.|=||.....-+.. ...+....+.+.|.||.|.|+|.|+|.+++..|.
T Consensus         5 ~~~vt~~~~~~~s~~vsW~~P~--~~~i~~Y~i~y~~~~~~~~~~-~~~v~~~~~~~~l~gL~P~t~Y~v~v~av~~~G~   81 (93)
T d1owwa_           5 EVFITETPSQPNSHPIQWNAPQ--PSHISKYILRWRPKNSVGRWK-EATIPGHLNSYTIKGLKPGVVYEGQLISIQQYGH   81 (93)
T ss_dssp             EEECCCCSSCTTCEEEEEECCS--SSCEEEEEEEEEETTCSSCCE-EEEECSSCCEEEECSCCSSEEEEEEEEEEESSSC
T ss_pred             ccEEEEccCCCCEEEEEeeccc--ccceeEEEEEEeeccccceee-eeccCCCccEEEECCcccCcEEEEEEEEEeCCCc
Confidence            4455555  4579999998754  346999999998765431111 2345667788999999999999999999999887


Q ss_pred             CcceeeEEecC
Q 004714          424 LGRCEIWFSTG  434 (734)
Q Consensus       424 lg~~E~k~~T~  434 (734)
                      =-..+..+.|.
T Consensus        82 s~~~~~~~tT~   92 (93)
T d1owwa_          82 QEVTRFDFTTT   92 (93)
T ss_dssp             EEEEEEEEEEC
T ss_pred             cCcEEEEEEec
Confidence            66666666664

>d2ic2a1 b.1.2.1 (A:466-572) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Hedgehog receptor iHog
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=98.06  E-value=3.9e-06  Score=70.45  Aligned_cols=77  Identities=12%  Similarity=0.135  Sum_probs=53.0

Q ss_pred             EEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC--C---------CCCCceeeecCCceeEeecCCcceeeeEEE
Q 004714          347 VKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG--F---------PARPTCTLFAPNTRFVVTGLCPATEYQFKV  415 (734)
Q Consensus       347 ~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~--y---------~~ept~~~~~p~~r~~vs~L~P~TEY~fkv  415 (734)
                      .++.+|+++||+|...........|+||.|=||.....  +         ............+.+.|+||.|.|.|.|||
T Consensus         6 p~v~~~~~~sv~l~W~~P~~~g~~I~~Y~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV   85 (107)
T d2ic2a1           6 PNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRI   85 (107)
T ss_dssp             CEEEECC---EEEEEEEECCSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEE
T ss_pred             CEEEEEECCEEEEEEEeCccccCCceEEEEEEEeccCCCcceEEEeeeeccceeeeecccceeEEEECCCcCCcEEEEEE
Confidence            46889999999999987654456799999977754322  1         011111223445689999999999999999


Q ss_pred             EeccCCcc
Q 004714          416 VSSNGTTE  423 (734)
Q Consensus       416 vsF~~~~e  423 (734)
                      .+++..|+
T Consensus        86 ~A~N~~G~   93 (107)
T d2ic2a1          86 LAVYSNND   93 (107)
T ss_dssp             EEEETTSC
T ss_pred             EEEcCCCC
Confidence            99997765

>d1x5ia1 b.1.2.1 (A:8-120) Neogenin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Neogenin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=1.2e-05  Score=67.96  Aligned_cols=86  Identities=13%  Similarity=0.028  Sum_probs=63.8

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  424 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  424 (734)
                      ..+++. .+.++|+|-+.........|.||.|-|+.....   .-+.++....++|.|.+|.|.|+|.|||.++++.|.=
T Consensus        25 ~~~~~~-~~~~si~v~W~~p~~~~g~i~~Y~i~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g  100 (113)
T d1x5ia1          25 SSLHVR-PLVTSIVVSWTPPENQNIVVRGYAIGYGIGSPH---AQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEG  100 (113)
T ss_dssp             SEEEEE-EETTEEEEEEECCSCTTBCCCEEEEEECSSCGG---GEEEECCTTCCEEEECSCCSSCEECCEEEEECSSCBC
T ss_pred             Eeeeee-eCCCEEEEEEEccccCCccEEEEEEEeeecccc---ceeeeeeCCccEEEEeccccCcEEEEEEEEECCCcCC
Confidence            457775 467899999886544455799999998877554   1123456678899999999999999999999998853


Q ss_pred             cceeeEEecC
Q 004714          425 GRCEIWFSTG  434 (734)
Q Consensus       425 g~~E~k~~T~  434 (734)
                      -.....+.|+
T Consensus       101 ~~~~~~~~T~  110 (113)
T d1x5ia1         101 IPLYESAVTR  110 (113)
T ss_dssp             CCCCCCEECC
T ss_pred             CCeeeEEEeC
Confidence            3345555554

>d2crma1 b.1.2.1 (A:8-114) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.03  E-value=1.7e-05  Score=65.88  Aligned_cols=75  Identities=11%  Similarity=0.151  Sum_probs=59.4

Q ss_pred             EEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          347 VKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       347 ~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      +.+..+++++|+|-...... ....+.+|.+.++.....  ..-..+....++.+.|.||+|.|+|.|||.+++..|.
T Consensus        18 ~~~~~~~~~sv~l~W~~P~~~~g~~~~~y~v~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n~~G~   93 (107)
T d2crma1          18 SVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNG--NKWEMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQ   93 (107)
T ss_dssp             EEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSS--CCCEEEECSSCSEEEECSCCTTSCEEEEEEEEETTEE
T ss_pred             EEEeeecCCEEEEEEEECccCCcceEEEEEEEEEeecCC--CcEEEeecCCccEEEEeccCCCCEEEEEEEEECCCcC
Confidence            66789999999999986543 345699999998876553  2223345667889999999999999999999998885

>d1bqua2 b.1.2.1 (A:100-214) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=3.6e-06  Score=70.67  Aligned_cols=78  Identities=18%  Similarity=0.239  Sum_probs=58.2

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          346 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      .+...+++++||+|-..........+.+|.|-||..... ...........+++.+.|+||.|.|.|.|||.+++..|.
T Consensus        12 ~v~~~~~~~~si~v~W~~p~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~V~a~~~~G~   90 (115)
T d1bqua2          12 SVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGK   90 (115)
T ss_dssp             EEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGGGGCSCCSEEEECSCCSSEEEEEEEEEEETTSC
T ss_pred             EEEEeccCCCEEEEEEeeccccccceeeeeeeeeeeeeeeeeccccccccccccEEeeCCCccCcEEEEEEEEEeCCCc
Confidence            344457889999999876443345689999999987666 333334445667789999999999999999999998774

>d2d9qb2 b.1.2.1 (B:204-308) Granulocyte colony-stimulating factor (GC-SF) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=6.2e-06  Score=68.76  Aligned_cols=78  Identities=15%  Similarity=0.093  Sum_probs=55.6

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          346 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      ...+..+++++|+|-..........+.+|.|=||.....-.-.....+..+++.+.|+||.|.|.|.|||.+++..|.
T Consensus        12 ~p~~~~~~~~~v~l~W~pp~~~~~~~~~y~i~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frVra~n~~g~   89 (105)
T d2d9qb2          12 SPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGEASWALVGPLPLEALQYELCGLLPATAYTLQIRCIRWPLP   89 (105)
T ss_dssp             -------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSCCCCEEEEEECSCEEEEEECSCCSCCCEEEEEEEEECSSC
T ss_pred             CCEeecCCCCeEEEEEcCCCCCCceeEEEEEEEEecCCccceeeeecccCCcceeEEecccCCeEEEEEEEEEeCCCC
Confidence            456668899999999986655556799999999987654211222235667889999999999999999999887764

>d1uena_ b.1.2.1 (A:) KIAA0343 protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: KIAA0343 protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=2.8e-05  Score=65.44  Aligned_cols=91  Identities=23%  Similarity=0.307  Sum_probs=67.2

Q ss_pred             cCceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCC--CCCCCce----eeecCCceeEeecCCcceeeeEE
Q 004714          343 VPNMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEG--FPARPTC----TLFAPNTRFVVTGLCPATEYQFK  414 (734)
Q Consensus       343 ~~~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~--y~~ept~----~~~~p~~r~~vs~L~P~TEY~fk  414 (734)
                      ++..|+++.+++++|+|-.+....  ....|.+|.+=|+.....  .....+.    ++....+.+.|.||.|.|.|.||
T Consensus        17 ~P~~v~v~~~~~~si~l~W~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~   96 (125)
T d1uena_          17 APGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTHGMLPGLEPFSHYTLN   96 (125)
T ss_dssp             CCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCSEEEEESCCSSCEEEEE
T ss_pred             CCcccEEEEecCCEEEEEEeCccCCCCCcceeeEEeEEEeecCCccceeecccceEEEeCCCccEEEECCCCCCCEEEEE
Confidence            355799999999999999987642  346789999888766544  3333222    34557789999999999999999


Q ss_pred             EEeccCCccCcce--eeEEecC
Q 004714          415 VVSSNGTTELGRC--EIWFSTG  434 (734)
Q Consensus       415 vvsF~~~~elg~~--E~k~~T~  434 (734)
                      |.+++..|+ |.+  ...+.|.
T Consensus        97 V~A~n~~G~-g~~S~~~~~~T~  117 (125)
T d1uena_          97 VRVVNGKGE-GPASPDRVFNTP  117 (125)
T ss_dssp             EEEEESSCE-EEECCCEEEECC
T ss_pred             EEEEeCCcc-cCCCCCEEEECC
Confidence            999999986 433  3555554

>d1wk0a_ b.1.2.1 (A:) Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Fibronectin type-III domain containing protein 3a, FNDC3A (KIAA0970)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=1.9e-05  Score=68.58  Aligned_cols=85  Identities=15%  Similarity=0.207  Sum_probs=60.9

Q ss_pred             EEEEeeceeEEEEeCcCCCC---------CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 004714          348 KFEDVRATSLTVVLGSEDPS---------PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  418 (734)
Q Consensus       348 rFE~vt~tSv~vvL~~~~~s---------~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  418 (734)
                      .+.+|+++||+|-++.....         ...+.+|.+.++.....  ..-..++....+++.|+||+|.|+|.|+|.++
T Consensus        25 ~V~~v~~~sv~l~W~~P~~~~~~~~~~~~~~~~~~y~v~~~~~~~~--~~~~~~~~~~~~~~~i~~L~P~t~Y~f~V~A~  102 (137)
T d1wk0a_          25 VASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKD--GKYKSVYVGEETNITLNDLKPAMDYHAKVQAE  102 (137)
T ss_dssp             EEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTT--SCCEEEEEESCSEEEECSCCTTCEECEEEEEE
T ss_pred             EEEEeEcCEEEEEEeCcCcCCCceeeccccceEEeeEEEEeeCCCC--ccEEEEEecCccEEEECCCCCCcEEEEEEEEE
Confidence            45789999999999764321         24678899988765442  22233456688899999999999999999999


Q ss_pred             cCCccCccee-eEEecC
Q 004714          419 NGTTELGRCE-IWFSTG  434 (734)
Q Consensus       419 ~~~~elg~~E-~k~~T~  434 (734)
                      ++.|+=-.++ +.+.|.
T Consensus       103 n~~G~g~~S~~~~~~T~  119 (137)
T d1wk0a_         103 YNSIKGTPSEAEIFTTL  119 (137)
T ss_dssp             ETTEECCCCCCCCEECC
T ss_pred             cCCcccCCCCCEEEECC
Confidence            9987522233 335554

>d1wj3a_ b.1.2.1 (A:) Contactin 3 (KIAA1496) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Contactin 3 (KIAA1496)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=2.9e-05  Score=65.94  Aligned_cols=83  Identities=11%  Similarity=0.111  Sum_probs=61.9

Q ss_pred             ceEEEEEeeceeEEEEeCcCCC--CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          345 NMVKFEDVRATSLTVVLGSEDP--SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      ..+....+++++|+|-++...+  ....|.||+|+||.....     .-.+...++.+.+.+|+|.|+|.|||.++|..|
T Consensus        22 p~~~~~~~~~~~i~v~W~~~~~~~~~g~i~~Y~v~y~~~~~~-----~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G   96 (117)
T d1wj3a_          22 PGNVVWNATDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQN-----NVQVLNTNKTSAELVLPIKEDYIIEVKATTDGG   96 (117)
T ss_dssp             CCSCBCCEETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCS-----SCEEEEESSSEEEEECCCSSCEEEEEEEEESSC
T ss_pred             CcceEEeecCCEEEEEEeecccccCCCceeEEEEEEEecCCC-----ceeeeeceeeEEEeeccCCcEEEEEEEEEcCCc
Confidence            3445567899999999987553  345799999999987653     113445577889999999999999999999988


Q ss_pred             cCccee-eEEe
Q 004714          423 ELGRCE-IWFS  432 (734)
Q Consensus       423 elg~~E-~k~~  432 (734)
                      +=-.+| +.+.
T Consensus        97 ~G~~S~~v~v~  107 (117)
T d1wj3a_          97 DGTSSEQIRIP  107 (117)
T ss_dssp             CCCBCCCEEEC
T ss_pred             cCCCCCCEEEe
Confidence            733444 3443

>d3d48r2 b.1.2.1 (R:101-204) Prolactin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=1.8e-05  Score=64.62  Aligned_cols=75  Identities=12%  Similarity=0.106  Sum_probs=52.4

Q ss_pred             EEeeceeEEEEeCcCCC----CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccCc
Q 004714          350 EDVRATSLTVVLGSEDP----SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELG  425 (734)
Q Consensus       350 E~vt~tSv~vvL~~~~~----s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg  425 (734)
                      .++++++|+|-......    ...-+.+|.+.|+.....   .-........+.+.|.||.|.|+|.|||-++++.|..|
T Consensus        16 ~~~~~~~l~v~W~pP~~~~~~~~~~~~~Y~~~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~t~Y~~rVrA~n~~G~ws   92 (104)
T d3d48r2          16 PEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAA---EWEIHFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWS   92 (104)
T ss_dssp             -----CCEEEEEECCTTCCCTTSSCCEEEEEEEEETTCS---SCEEEEEETCSEEEECC--CCCEEEEEEEEEESSSCCC
T ss_pred             ccCCCCeEEEEEeCCccccCCCCcEEEEEeecccccccc---ceeeeccccccEEEECCCCCCCEEEEEEEEEeCCCCCC
Confidence            47788999999886642    223467899988877654   22345567788999999999999999999999988767


Q ss_pred             ce
Q 004714          426 RC  427 (734)
Q Consensus       426 ~~  427 (734)
                      .|
T Consensus        93 ~w   94 (104)
T d3d48r2          93 AW   94 (104)
T ss_dssp             CC
T ss_pred             CC
Confidence            54

>d1cd9b2 b.1.2.1 (B:108-213) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.76  E-value=2.1e-05  Score=66.02  Aligned_cols=78  Identities=14%  Similarity=0.057  Sum_probs=55.2

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          346 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      ....-..++++|+|..+........+.+|.|=||.....-.-+....+..+.+.|.|+||.|.|+|.|||-+.+..|.
T Consensus        13 ~p~~~~~~~~~i~v~W~pp~~~~~~~~~Y~i~y~~~~~~~~w~~v~~~~~~~~~~~l~~L~p~t~Y~frVra~~~~g~   90 (106)
T d1cd9b2          13 GPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLP   90 (106)
T ss_dssp             -------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEEEEEESCEEEEEECCCCSCSCEEEEEEEEESSSC
T ss_pred             CCeEecCCCCEEEEEEcCcccCCccceEEEEEEeeccccccceeeecccCCceEEEEeccCCCeEEEEEEEEEeCCCC
Confidence            345667889999999976554556689999999875443122223345667899999999999999999999888664

>d1iarb2 b.1.2.1 (B:97-197) Interleukin-4 receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-4 receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=1.5e-05  Score=65.20  Aligned_cols=79  Identities=14%  Similarity=0.154  Sum_probs=49.1

Q ss_pred             CceEEEEEeeceeEEEEeCcCCC---CCCCcceEEEEeeecCCCCC-CCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDP---SPGNIISYTLWHRRAHEGFP-ARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  419 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~---s~~~i~Gy~LWhrks~~~y~-~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  419 (734)
                      +.-+.++++++++++|-......   .......|.+-||...+... ..-......+.+.+.|.+|.|.|+|.|||-+.+
T Consensus         5 P~~l~v~~~~~~s~~v~W~~P~~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rVrA~~   84 (101)
T d1iarb2           5 PGNLTVHTNVSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADFRIYNVTYLEPSLRIAASTLKSGISYRARVRAWA   84 (101)
T ss_dssp             CEEEEEC----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCEEEEEECSSCCEEEECC-----CCCEEEEEEEEC
T ss_pred             CCcCEEEEEeCCeEEEEEccccCCCCccceeeEEEEeeecccceeeeeeeeeccCccceEEEECCCCCCCEEEEEEEEEc
Confidence            34688899999999999886543   23345579999988766522 212223345567899999999999999999988


Q ss_pred             CCc
Q 004714          420 GTT  422 (734)
Q Consensus       420 ~~~  422 (734)
                      +.|
T Consensus        85 ~~g   87 (101)
T d1iarb2          85 QAY   87 (101)
T ss_dssp             GGG
T ss_pred             CCC
Confidence            755

>d1bqua1 b.1.2.1 (A:5-99) Cytokine receptor gp130 cytokine-binding domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor gp130 cytokine-binding domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.68  E-value=3.2e-05  Score=63.46  Aligned_cols=76  Identities=9%  Similarity=-0.066  Sum_probs=59.9

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      -.++...++.+|+++-..... .....++|.|+||..... +.  .......+..-+++.+|.|.|.|.|+|.++|..|.
T Consensus         8 ~n~~~~~~~~~si~~~W~p~~-~~~~~~~y~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~L~~~~~Y~f~V~A~N~~G~   84 (95)
T d1bqua1           8 KNLSCIVNEGKKMRCEWDGGR-ETHLETNFTLKSEWATHKFAD--CKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGK   84 (95)
T ss_dssp             EEEEEEEETTSCCEEEEECCS-CCSSCCEEEEEEEETTEECCC--EECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEE
T ss_pred             eeeEEEEccCCEEEEEEeCcc-cCCCceEEEEEEEEcccceeE--eecccccceeeeeeeecCCCcEEEEEEEEEeCCcc
Confidence            358899999999999987653 334468999999998765 32  22334566777899999999999999999998874

>d2dtge1 b.1.2.1 (E:808-909) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=3.5e-06  Score=70.60  Aligned_cols=77  Identities=18%  Similarity=0.239  Sum_probs=58.9

Q ss_pred             eEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc
Q 004714          346 MVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE  423 (734)
Q Consensus       346 ~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e  423 (734)
                      .|+++.|+++||+|-..........|.||+|.||..... -...-+.......+.+.|.+|.|.| |.|||.++|..|+
T Consensus        10 ~v~~~~~~~~sv~l~W~pP~~~ng~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~t-Y~~rV~A~n~~G~   87 (102)
T d2dtge1          10 PVTHEIFENNVVHLMWQEPKEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSPGN-YSVRIRATSLAGN   87 (102)
T ss_dssp             CCCCCSSSSSCCCCCCCCCCSCSSCEEEECCCCBSSSBCCCCCCCCSSSCCCTTCCCCCSCCSSE-ECCCCCEEETTBC
T ss_pred             CCEEEEECCCEEEEEEEeCCCCcceEEEeeeEEEecCCCCceeeeeeecccceEEEEEeccceee-EEEEEEEEcCCcc
Confidence            377888999999999886554456699999999987654 2222223345566779999999986 9999999999884

>d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Granulocyte colony-stimulating factor (GC-SF) receptor
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.53  E-value=0.00016  Score=59.89  Aligned_cols=77  Identities=14%  Similarity=-0.001  Sum_probs=54.7

Q ss_pred             EE-EEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCcee---e--ecCCceeEeecCCcceeeeEEEEecc
Q 004714          347 VK-FEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCT---L--FAPNTRFVVTGLCPATEYQFKVVSSN  419 (734)
Q Consensus       347 ~r-FE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~---~--~~p~~r~~vs~L~P~TEY~fkvvsF~  419 (734)
                      |+ +.++++++|++-..-. ......+.|.++|+..... -.......   .  ....+.|.|++|.|.|+|.|||.+.+
T Consensus        11 v~~i~~~~~~sv~~sW~p~-~d~~~~~~y~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~t~Y~frV~A~N   89 (107)
T d1cd9b1          11 LSCLMHLTTNSLVCQWEPG-PETHLPTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQYMAIWVQAEN   89 (107)
T ss_dssp             EEEEEETTTTEEEEEEECC-SCCSSCCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSCEEEEEEEEE
T ss_pred             CEEEEecCCCEEEEEEcCC-CCCCCCcceeEEEEEeecccceeeeeeeeeccccCccccEEEcCCCCcCceEEEEEEEEe
Confidence            65 6789999999999643 3333346788888877655 22222211   1  23457899999999999999999999


Q ss_pred             CCccC
Q 004714          420 GTTEL  424 (734)
Q Consensus       420 ~~~el  424 (734)
                      ..|+-
T Consensus        90 ~~G~s   94 (107)
T d1cd9b1          90 MLGSS   94 (107)
T ss_dssp             TTEEE
T ss_pred             CCccc
Confidence            87753

>d1n26a3 b.1.2.1 (A:196-299) Interleukin-6 receptor alpha chain, domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-6 receptor alpha chain, domains 2 and 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=0.00018  Score=59.33  Aligned_cols=75  Identities=11%  Similarity=0.037  Sum_probs=57.1

Q ss_pred             eEEEEEee--ceeEEEEeCcCCC--CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCC
Q 004714          346 MVKFEDVR--ATSLTVVLGSEDP--SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGT  421 (734)
Q Consensus       346 ~~rFE~vt--~tSv~vvL~~~~~--s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~  421 (734)
                      .+.+..|+  +++|.|-.+....  ....+..|.+.||.....  ..-+..+...++.++|.+|.|.|.|.|||-+++..
T Consensus         7 ~l~v~~~~~~~~~l~v~W~~P~~~~~~~~~~~y~v~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~rVra~n~~   84 (104)
T d1n26a3           7 NITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSK--TFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEF   84 (104)
T ss_dssp             EEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCS--CCEEEECGGGCSEEEESSCCTTCCEEEEEEEEETT
T ss_pred             CCEEEEEecCCCEEEEEEEeeeecCCCceeEEEEEEEeeCCCC--ceeeeccccceEEEEECCCCCCCEEEEEEEEEeCC
Confidence            46677774  5679998887642  467799999999977654  22233456677899999999999999999998875


Q ss_pred             c
Q 004714          422 T  422 (734)
Q Consensus       422 ~  422 (734)
                      |
T Consensus        85 g   85 (104)
T d1n26a3          85 G   85 (104)
T ss_dssp             T
T ss_pred             C
Confidence            4

>d2gysa4 b.1.2.1 (A:317-416) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=0.00022  Score=58.44  Aligned_cols=76  Identities=12%  Similarity=0.129  Sum_probs=49.0

Q ss_pred             EEEEEeeceeEEEEeCcCCC-CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccC
Q 004714          347 VKFEDVRATSLTVVLGSEDP-SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTEL  424 (734)
Q Consensus       347 ~rFE~vt~tSv~vvL~~~~~-s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~el  424 (734)
                      +.... +..+++|-...... ....+.+|.+.||+....-....+ ....+.+.+.|.+|.|+|.|.|||-+.++.|.+
T Consensus        11 l~v~~-~~~s~~l~W~~P~~~~~~~~~~Y~v~y~~~~~~~~~~~~-~~~~~~~~~~l~~L~p~t~Y~~rVRa~~~~g~~   87 (100)
T d2gysa4          11 LQVTK-DGDSYSLRWETMKMRYEHIDHTFEIQYRKDTATWKDSKT-ETLQNAHSMALPALEPSTRYWARVRVRTSRTGY   87 (100)
T ss_dssp             EEEC----CCCEEEEEC--------CEEEEEEEECSSSCSTTSCE-EEEESCSEEECCCCCSSCCCEEEEEEEECCTTC
T ss_pred             cEEEE-CCCEEEEEEecCcccCCccceEEEEEEeecccceeceee-cccCCceEEEeCCCCCCCeEEEEEEEEECCCCC
Confidence            44433 45688887776654 344567999999987654222222 234578899999999999999999998877654

>d1f6fb2 b.1.2.1 (B:101-203) Prolactin receptor {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Prolactin receptor
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.39  E-value=0.0003  Score=57.69  Aligned_cols=75  Identities=15%  Similarity=0.100  Sum_probs=56.3

Q ss_pred             EEeeceeEEEEeCcCCCC----CCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCccCc
Q 004714          350 EDVRATSLTVVLGSEDPS----PGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELG  425 (734)
Q Consensus       350 E~vt~tSv~vvL~~~~~s----~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg  425 (734)
                      .+.++++|+|-.+.....    ...+.+|.|-||.....   .-..+.....+.+.|+||.|+|+|.|||-+-++.|..|
T Consensus        16 ~~~~~~~v~vsW~pP~~~~~~~~~~~l~Y~v~~~~~~~~---~~~~~~~~~~~~~~i~~L~p~t~Y~~rVra~~~~G~wS   92 (103)
T d1f6fb2          16 LKDKKTYLWVKWSPPTITDVKTGWFTMEYEIRLKPEEAE---EWEIHFTGHQTQFKVFDLYPGQKYLVQTRCKPDHGYWS   92 (103)
T ss_dssp             ---CCCCEEEEEECCTTSCTTTTSSCEEEEEEEEESSCS---CCEEEEEETCSEEEECCCCTTCEEEEEEEEEESSSCCC
T ss_pred             cccCCCEEEEEECCCCcccCCCCcEEEEEEEEEEeCCCc---ceeeecccceeEEEeCCCCcceEEEEEEEEEeCCCCCC
Confidence            466788999999876432    23568999999988765   22335566789999999999999999999988877656


Q ss_pred             ce
Q 004714          426 RC  427 (734)
Q Consensus       426 ~~  427 (734)
                      .|
T Consensus        93 ~w   94 (103)
T d1f6fb2          93 RW   94 (103)
T ss_dssp             CC
T ss_pred             CC
Confidence            55

>d2b5ic1 b.1.2.1 (C:130-224) Cytokine receptor common gamma chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Cytokine receptor common gamma chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.24  E-value=0.001  Score=54.61  Aligned_cols=70  Identities=13%  Similarity=0.153  Sum_probs=55.7

Q ss_pred             CceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  418 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  418 (734)
                      +--+..++++.++|+|-.+...+  ..+.+|.|.|+.....   +-+-+.....+.+.|.+|.|.|+|.|||-+=
T Consensus         6 P~nl~v~~~~~~~v~l~W~~p~~--~~~~~y~v~y~~~~~~---~~~~~~~~~~~~~~~~~L~p~t~Y~frVRa~   75 (95)
T d2b5ic1           6 PENLTLHKLSESQLELNWNNRFL--NHCLEHLVQYRTDWDH---SWTEQSVDYRHKFSLPSVDGQKRYTFRVRSR   75 (95)
T ss_dssp             CEEEEEEEEETTEEEEEEECSSC--STTCEEEEEEEETTCS---SCEEEEECSSCEEEECSCCTTSCEEEEEEEE
T ss_pred             CCCCEEEEEeCCEEEEEECCCCC--ceeEEEEEEEEcCCCc---eeeEeeecccceeEcCCCCCCCEEEEEEEEe
Confidence            34688899999999999876543  4578999999988664   2233445677899999999999999999873

>d1erna2 b.1.2.1 (A:117-221) Erythropoietin (EPO) receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Erythropoietin (EPO) receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.06  E-value=0.00096  Score=54.89  Aligned_cols=78  Identities=13%  Similarity=0.095  Sum_probs=54.4

Q ss_pred             cCceEEEEEe-eceeEEEEeCcCC-CCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccC
Q 004714          343 VPNMVKFEDV-RATSLTVVLGSED-PSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNG  420 (734)
Q Consensus       343 ~~~~~rFE~v-t~tSv~vvL~~~~-~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~  420 (734)
                      ++..+..+.. .+++|+|-..... .....+.+|.+-||..... .......+....+.++|.+|.|.|.|.|||-+-++
T Consensus         7 PP~nl~v~~~~~~~~l~v~W~~P~~~~~~~~~~Y~v~y~~~~~~-~~~~~~~~~~~~t~~~i~~L~p~t~Y~~rVRar~~   85 (105)
T d1erna2           7 APVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGNGA-GSVQRVEILEGRTECVLSNLRGRTRYTFAVRARMA   85 (105)
T ss_dssp             CCEEEEEEECCC-CCEEEEEECSSSCSCGGGEEEEEEEEEC-CC-CEEEEEEECTTCCEEEECSCCSSCEEEEEEEEEEC
T ss_pred             CCCCCEEEEecCCCcEEEEeeeccccccceEEEEEEEEecCCCC-CceEEEeecCCccEEEEeCCCCCcEEEEEEEEEEC
Confidence            3345666665 3556777776554 3467788999999987653 22234455666788999999999999999999765


Q ss_pred             C
Q 004714          421 T  421 (734)
Q Consensus       421 ~  421 (734)
                      .
T Consensus        86 ~   86 (105)
T d1erna2          86 E   86 (105)
T ss_dssp             S
T ss_pred             C
Confidence            3

>d1axib2 b.1.2.1 (B:131-236) Growth hormone receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Growth hormone receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.85  E-value=0.0013  Score=54.86  Aligned_cols=71  Identities=17%  Similarity=0.137  Sum_probs=51.0

Q ss_pred             ceeEEEEeCcCCC----CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCcc-Ccce
Q 004714          354 ATSLTVVLGSEDP----SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTE-LGRC  427 (734)
Q Consensus       354 ~tSv~vvL~~~~~----s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~e-lg~~  427 (734)
                      ..+|+|-......    ....+..|.|.||.....   .-+.+....++.+.|+||.|+|+|.|||-+.+..+. .|.|
T Consensus        20 ~~~v~vsW~pP~~~~~~~~~~~l~Y~v~y~~~~~~---~w~~~~~~~~~~~~i~~L~~~t~Y~frVRa~~~~~g~ws~w   95 (106)
T d1axib2          20 HADIQVRWEAPRNADIQKGWMVLEYELQYKEVNET---KWKMMDPILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEF   95 (106)
T ss_dssp             EEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCS---SCEECCCBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCC
T ss_pred             cCeEEEEEcCCCccCCCCCeeEEEEEEeeeecCCc---cceeeeecccceEEECCCCCCCEEEEEEEEEECCCCCCCCC
Confidence            3478888875532    234578899999987664   223344567899999999999999999999775432 3543

>d1uc6a_ b.1.2.1 (A:) Ciliary neurotrophic factor receptor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Ciliary neurotrophic factor receptor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.0055  Score=50.23  Aligned_cols=88  Identities=14%  Similarity=0.068  Sum_probs=59.5

Q ss_pred             ceEEEEEe--eceeEEEEeCcCCC---CCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEecc
Q 004714          345 NMVKFEDV--RATSLTVVLGSEDP---SPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSN  419 (734)
Q Consensus       345 ~~~rFE~v--t~tSv~vvL~~~~~---s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~  419 (734)
                      -.++++.|  ++++|+|-......   ...-+..|.+=|+.....   +-..+.....+.+.|.+|.|.|+|.|||-+.+
T Consensus        12 ~~l~v~~~~~~~~~l~l~W~~P~~~~~~~~~~~~y~~~~~~~~~~---~~~~~~~~~~~~~~i~~L~~~t~Y~~rVrA~~   88 (109)
T d1uc6a_          12 ENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILD---QWQHVELSNGTAHTITDAYAGKEYIIQVAAKD   88 (109)
T ss_dssp             EEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSC---CCCCEEESSCSEEEETTCCSSSCEEEEEECCB
T ss_pred             CCCEEEEEecCCCEEEEEEeCCcccCCCCeeEEEEEEEEeecCCC---ceEEeccCCceeEEeCCCCCCCEEEEEEEEEE
Confidence            35677766  67889998876542   223456788877776554   11235567788999999999999999999966


Q ss_pred             CC-ccCcce-eeEEecCc
Q 004714          420 GT-TELGRC-EIWFSTGS  435 (734)
Q Consensus       420 ~~-~elg~~-E~k~~T~s  435 (734)
                      .. |..+.| +.-..|..
T Consensus        89 ~~~g~wS~WS~~~~~tt~  106 (109)
T d1uc6a_          89 NEIGTWSDWSVAAHATPW  106 (109)
T ss_dssp             SSSCCCCCCCEEEEECCC
T ss_pred             CCCCCcCCCCCCEEeECC
Confidence            52 344543 44444443

>d2gysa2 b.1.2.1 (A:104-217) Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Common beta-chain in the GM-CSF, IL-3 and IL-5 receptors
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.74  E-value=0.0035  Score=51.83  Aligned_cols=78  Identities=8%  Similarity=0.080  Sum_probs=54.3

Q ss_pred             CceEEEEEeeceeEEEEeCcCCC------CCCCcceEEEEeeecCCCCCCCCce-eeecCCceeEeecCCcceeeeEEEE
Q 004714          344 PNMVKFEDVRATSLTVVLGSEDP------SPGNIISYTLWHRRAHEGFPARPTC-TLFAPNTRFVVTGLCPATEYQFKVV  416 (734)
Q Consensus       344 ~~~~rFE~vt~tSv~vvL~~~~~------s~~~i~Gy~LWhrks~~~y~~ept~-~~~~p~~r~~vs~L~P~TEY~fkvv  416 (734)
                      +..+.+ .++.++|+|-......      ....+..|.|-||+.... ..+-.. ..-.+...+.|.+|.|.|+|.|||-
T Consensus         9 P~nl~v-~~~~~~~~lsW~~P~~~~~~~~~~~~~~~y~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~rVR   86 (114)
T d2gysa2           9 PRDLQI-STDQDHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQDS-WEDAAILLSNTSQATLGPEHLMPSSTYVARVR   86 (114)
T ss_dssp             CEEEEE-EEETTEEEEEEECCC-----CCSCGGGEEEEEEEEETTSC-STTCEEEEESSSEEEECTTTCCTTCEEEEEEE
T ss_pred             CCCeEE-EEeCCEEEEECCCCcccccccceeeeEEEEEEEEeccCCc-eEEEEEeeccCceEEEEeCCCCCCcEEEEEEE
Confidence            345666 4788898887766532      123456799999987653 122222 2345667899999999999999999


Q ss_pred             eccCCcc
Q 004714          417 SSNGTTE  423 (734)
Q Consensus       417 sF~~~~e  423 (734)
                      +++..|.
T Consensus        87 a~~~~g~   93 (114)
T d2gysa2          87 TRLAPGS   93 (114)
T ss_dssp             EEECTTS
T ss_pred             EEeCCCC
Confidence            9987654

>d2cspa1 b.1.2.1 (A:8-124) Rim binding protein 2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Rim binding protein 2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.12  E-value=0.00081  Score=57.18  Aligned_cols=74  Identities=14%  Similarity=0.095  Sum_probs=51.3

Q ss_pred             eEEEE-EeeceeEEEEeCcCC------CCCCCcceEEEEeeecCCCCCCCCceeeecCCceeEeecCCcceeeeEEEEec
Q 004714          346 MVKFE-DVRATSLTVVLGSED------PSPGNIISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSS  418 (734)
Q Consensus       346 ~~rFE-~vt~tSv~vvL~~~~------~s~~~i~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF  418 (734)
                      .++++ .++++||.|-++-..      .....|.||+++++.....-..    ......+.+.|+||.|.|.|.|+|.++
T Consensus        16 ~v~v~~~~s~~si~vsW~PP~~~~~~~~~~~~i~~Y~v~~~~~~~~~~~----~~~~~~~~~~i~~L~~~t~Y~v~V~A~   91 (117)
T d2cspa1          16 DVTVQAGVTPATIRVSWRPPVLTPTGLSNGANVTGYGVYAKGQRVAEVI----FPTADSTAVELVRLRSLEAKGVTVRTL   91 (117)
T ss_dssp             EEEECCCSSTTEEEEEEECCCCCTTSCSSSSCEEEEEEESSSSEEEEEC----CTTCSEEEEESHHHHHHTCSCBEEEEE
T ss_pred             ccEEEEecCCCEEEEEEcCCCccccCcccccceEEEEEEeecccceeee----eeccceeeeeccCCCCCcEEEEEEEEE
Confidence            45554 367789999886431      1245688898887544332111    123456688999999999999999999


Q ss_pred             cCCcc
Q 004714          419 NGTTE  423 (734)
Q Consensus       419 ~~~~e  423 (734)
                      |..|+
T Consensus        92 n~~G~   96 (117)
T d2cspa1          92 SAQGE   96 (117)
T ss_dssp             ESSCC
T ss_pred             cCCCc
Confidence            99886

>d1fyhb1 b.1.2.1 (B:12-109) Interferon-gamma receptor alpha chain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interferon-gamma receptor alpha chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.07  E-value=0.0045  Score=49.97  Aligned_cols=81  Identities=14%  Similarity=0.040  Sum_probs=54.7

Q ss_pred             cccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCcee-eecCCceeEeecCCcceeeeEEEEec
Q 004714          341 VIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCT-LFAPNTRFVVTGLCPATEYQFKVVSS  418 (734)
Q Consensus       341 l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~-~~~p~~r~~vs~L~P~TEY~fkvvsF  418 (734)
                      +|++.-++++.++... +|-.+........+  |...++..+.. ....+.|. +......+.+.+|.|.+.|.|||-++
T Consensus         1 vP~P~nv~v~s~n~~~-~L~W~pP~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~Y~fRV~A~   77 (98)
T d1fyhb1           1 VPTPTNVTIESYNMNP-IVYWEYQIMPQVPV--FTVEVKNYGVKNSEWIDACINISHHYCNISDHVGDPSNSLWVRVKAR   77 (98)
T ss_dssp             CCCCEEEEEECBSSCC-EEEEECCCCSSCCE--EEEEEEETTCSSSCCEEEEEEESSSEEECGGGCCSTTSCEEEEEEEE
T ss_pred             CccCCceEEEEeCCcE-EEEECCCCCCCCCc--eeEEEEEeccccceeEEeeeecccceeeeEecccCCCCEEEEEEEEE
Confidence            4667789999887654 57777654433333  44444444333 33333333 46677789999999999999999999


Q ss_pred             cCCccC
Q 004714          419 NGTTEL  424 (734)
Q Consensus       419 ~~~~el  424 (734)
                      ++.|.=
T Consensus        78 n~~g~S   83 (98)
T d1fyhb1          78 VGQKES   83 (98)
T ss_dssp             ETTEEC
T ss_pred             cCCccc
Confidence            988653

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.74  E-value=0.0031  Score=53.54  Aligned_cols=37  Identities=19%  Similarity=0.244  Sum_probs=31.1

Q ss_pred             CceeeecCCceeEeecCCcceeeeEEEEeccCCccCc
Q 004714          389 PTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTTELG  425 (734)
Q Consensus       389 pt~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~elg  425 (734)
                      ....+....+++.|.||.|.|.|.|||.+|+..|.-+
T Consensus       146 ~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~~~~~  182 (196)
T d2dtge2         146 RPFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEE  182 (196)
T ss_dssp             SCSCEECSCSEEEECSSCSSCEEEECCEEESCSSSSC
T ss_pred             EEEEeccceEEEEECCCCCCCEEEEEEEEEECCCCCC
Confidence            3445567788999999999999999999999887654

>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: PHD finger protein 8
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.73  E-value=0.007  Score=49.53  Aligned_cols=51  Identities=24%  Similarity=0.494  Sum_probs=33.6

Q ss_pred             eeeeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccccceeEEeccCCCcc
Q 004714          162 CCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVN  230 (734)
Q Consensus       162 C~IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~Cgk~s  230 (734)
                      +|||.+-++..  -.||.||        .|.-|-|..|.      |+..  .....+..|+|..|...+
T Consensus        14 ~CiC~~~~~~~--~~mI~Cd--------~C~~W~H~~C~------g~~~--~~~~~~~~~~C~~C~~~~   64 (79)
T d1wepa_          14 YCLCRQPYNVN--HFMIECG--------LCQDWFHGSCV------GIEE--ENAVDIDIYHCPDCEAVF   64 (79)
T ss_dssp             CSTTSCSCCSS--SCEEEBT--------TTCCEEEHHHH------TCCH--HHHTTCSBBCCTTTTTTS
T ss_pred             EeECCCccCCC--CcEEECC--------CCCCcEecccc------Ccch--hcCCCCCEEECccCcCCc
Confidence            35787754322  2699999        99999999997      2211  011233479999997643

>d2dtge2 b.1.2.1 (E:593-807) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.70  E-value=0.038  Score=46.53  Aligned_cols=70  Identities=11%  Similarity=0.038  Sum_probs=39.3

Q ss_pred             ceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCceeeecCCceeEeecCCcceeeeEEEEeccCCc
Q 004714          345 NMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCTLFAPNTRFVVTGLCPATEYQFKVVSSNGTT  422 (734)
Q Consensus       345 ~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~~~~p~~r~~vs~L~P~TEY~fkvvsF~~~~  422 (734)
                      --++...++++||+|-.+......+.|.||.|+|+..... ....        .......+|.|.+.|.|+|.+++..+
T Consensus         7 ~~~~~~~~s~~si~vsW~pP~~~ng~i~~Y~V~~~~~~~~~~~~~--------~~~~~~~~~~~~~~y~~~v~~~~~~~   77 (196)
T d2dtge2           7 LDPISVSNSSSQIILKWKPPSDPNGNITHYLVFWERQAEDSELFE--------LDYCLKGLKLPSRTWSPPFESEDSQK   77 (196)
T ss_dssp             EEEEEEECSSSCEEEEEECCCCSSSSCSEEECCEEEECCCCSCTT--------CSSSCSCCCCCC--------------
T ss_pred             cCCEEEeccCCEEEEEEECCCCCCCcEEEEEEEEEcCCCCCceeE--------EeeEEeccccceeEEEEEEEEEcCCc
Confidence            4688999999999999986543345799999999887664 2222        12233345678899999998876654

>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: PHD finger protein At5g26210
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=93.59  E-value=0.0083  Score=46.90  Aligned_cols=51  Identities=24%  Similarity=0.552  Sum_probs=34.7

Q ss_pred             ceeeeeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhh-ccccccccCCCccccceeEEeccCCCc
Q 004714          160 CSCCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALK-NERSGIGKDRCYSGLDGSFYCISCRKV  229 (734)
Q Consensus       160 CsC~IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr-~~~~G~~~~g~~~~lD~~f~C~~Cgk~  229 (734)
                      .-|.+|.+-++.  .-.||.|+        .|+.|-|+.|.=- ...         ......|+|..|-..
T Consensus         7 ~~C~~C~~~~~~--~~~~I~Cd--------~C~~w~H~~C~~~~~~~---------~~~~~~w~C~~C~~~   58 (64)
T d1we9a_           7 GQCGACGESYAA--DEFWICCD--------LCEMWFHGKCVKITPAR---------AEHIKQYKCPSCSNK   58 (64)
T ss_dssp             CCCSSSCCCCCS--SSCEEECS--------SSCCEEETTTTTCCTTG---------GGGCSSCCCHHHHTT
T ss_pred             CcCcCcCCCCCC--CCCEEEcC--------CCCccCCcccCCcChHH---------CCCCCeEECcCCcCc
Confidence            457888875433  23699999        9999999999721 111         112247999999654

>d1y6kr1 b.1.2.1 (R:2-100) Interleukin-10 receptor 1, IL-10R1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Interleukin-10 receptor 1, IL-10R1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.07  E-value=0.07  Score=43.84  Aligned_cols=82  Identities=15%  Similarity=0.152  Sum_probs=58.4

Q ss_pred             CcccCceEEEEEeeceeEEEEeCcCCCCCCCcceEEEEeeecCCC-CCCCCcee-eecCCceeEeecCCcceeeeEEEEe
Q 004714          340 NVIVPNMVKFEDVRATSLTVVLGSEDPSPGNIISYTLWHRRAHEG-FPARPTCT-LFAPNTRFVVTGLCPATEYQFKVVS  417 (734)
Q Consensus       340 ~l~~~~~~rFE~vt~tSv~vvL~~~~~s~~~i~Gy~LWhrks~~~-y~~ept~~-~~~p~~r~~vs~L~P~TEY~fkvvs  417 (734)
                      .||++.-|+|+.+. +..+|..+-.. ......+|.+=|++.... ....+.|+ +......+.+.+|.+..+|.|||-+
T Consensus         3 ~lP~P~nv~~~s~n-~~~~L~W~pp~-~~g~~~~Y~Ve~~~~~~~~W~~v~~c~~~t~~~~~~~~~~l~~~~~Y~fRVrA   80 (99)
T d1y6kr1           3 ELPSPPSVWFEAEF-FHHILHWTPIP-QQSESTCYEVALLRYGIESWNSISQCSQTLSYDLTAVTLDLYHSNGYRARVRA   80 (99)
T ss_dssp             CCCCCSCEEEEEET-TEEEEEECCCT-TCCTTCEEEEEEEETTSCCCEEEEEEESSSEEECGGGGTTGGGSSCEEEEEEE
T ss_pred             cCCCCCcceEEEEC-CEEEEEEcCCC-CcCCCCEEEEEEEECCCcceEEEEeeccccccceeeeeeecCCCCEEEEEEEE
Confidence            46777788885444 56667775332 223346799999887665 55555555 3445667889999999999999999


Q ss_pred             ccCCcc
Q 004714          418 SNGTTE  423 (734)
Q Consensus       418 F~~~~e  423 (734)
                      .++.+.
T Consensus        81 ~n~~g~   86 (99)
T d1y6kr1          81 VDGSRH   86 (99)
T ss_dssp             EETTEE
T ss_pred             EcCCCc
Confidence            988764

>d2c4fu1 b.1.2.1 (U:91-210) Extracellular region of human tissue factor {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Fibronectin type III
family: Fibronectin type III
domain: Extracellular region of human tissue factor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.83  E-value=0.13  Score=44.60  Aligned_cols=70  Identities=17%  Similarity=0.207  Sum_probs=50.3

Q ss_pred             CcccCceEEEEEeeceeEEEEeCcCCC---------CCCCc----ceEEEEeeecCCCCCCCCceeeecCCceeEeecCC
Q 004714          340 NVIVPNMVKFEDVRATSLTVVLGSEDP---------SPGNI----ISYTLWHRRAHEGFPARPTCTLFAPNTRFVVTGLC  406 (734)
Q Consensus       340 ~l~~~~~~rFE~vt~tSv~vvL~~~~~---------s~~~i----~Gy~LWhrks~~~y~~ept~~~~~p~~r~~vs~L~  406 (734)
                      +.+.+..|........||.|.+.....         +..+|    --|+|-||+....         -.-++.+.|.||.
T Consensus        16 T~IGPP~v~~~~~~~~sl~V~i~~P~t~~~~~~~~~~~~d~~~~~l~Y~V~~w~~~s~---------~~~~~~~~l~~L~   86 (116)
T d2c4fu1          16 TNLGQPTIQSFEQVGTKVNVTVEDERTLVRRNNTFLSLRDVFGKDLIYTLYYWSGKKT---------AKTNTNEFLIDVD   86 (116)
T ss_dssp             SBCCCCCEEEEEEETTEEEEEECCCEEEEESSSCEEEHHHHHGGGCEEEEEECCCCEE---------EEESSSEEEEECC
T ss_pred             CEeCCceEEEEecCCCEEEEEEeCCCCcccCCCceeehhhhccCCcEEEEEEEECCce---------EEEeeeEEEeCCC
Confidence            445566788777777899998866531         11222    3599999987553         1236778999999


Q ss_pred             cceeeeEEEEec
Q 004714          407 PATEYQFKVVSS  418 (734)
Q Consensus       407 P~TEY~fkvvsF  418 (734)
                      |.|+|+|+|=+|
T Consensus        87 p~t~YCv~Vqa~   98 (116)
T d2c4fu1          87 KGENYCFSVQAV   98 (116)
T ss_dssp             TTCCCEEEEEEE
T ss_pred             CCCcEEEEEEEE
Confidence            999999999887

>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: PHD finger protein At1g33420
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=88.91  E-value=0.042  Score=43.66  Aligned_cols=46  Identities=33%  Similarity=0.777  Sum_probs=32.1

Q ss_pred             eeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccccceeEEeccCCC
Q 004714          164 ICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRK  228 (734)
Q Consensus       164 IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~Cgk  228 (734)
                      ||++-+++  .-.||.|+        .|..|-|+.|.      |+-..   ...+..|+|..|-.
T Consensus        20 ~C~~~~~~--~~~mv~Cd--------~C~~w~H~~C~------g~~~~---~~~~~~~~C~~C~~   65 (72)
T d1weea_          20 KCGTKDDD--GERMLACD--------GCGVWHHTRCI------GINNA---DALPSKFLCFRCIE   65 (72)
T ss_dssp             TTCCCSCC--SSCEEECS--------SSCEEEETTTT------TCCTT---SCCCSCCCCHHHHH
T ss_pred             eCCCCcCC--CCeEEEeC--------CCCCcCchhhc------CCccc---cCCCCcEECcCCcC
Confidence            67764433  45799999        99999999996      22211   23456899998843

>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: PHD finger protein 22
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.11  E-value=0.046  Score=44.86  Aligned_cols=52  Identities=19%  Similarity=0.504  Sum_probs=33.4

Q ss_pred             eeeeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccccceeEEeccCC
Q 004714          162 CCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCR  227 (734)
Q Consensus       162 C~IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~Cg  227 (734)
                      |+||.+... .+.-.||.|+        .|..|.|+.|.=-.......     ...+..|+|..|-
T Consensus        19 C~iC~~~~~-~~~~~~v~Cd--------~C~~~~H~~C~~p~~~~~~~-----~~~~~~W~C~~C~   70 (88)
T d1weva_          19 CVVCRQMTV-ASGNQLVECQ--------ECHNLYHQDCHKPQVTDKEV-----NDPRLVWYCARCT   70 (88)
T ss_dssp             CSSSCCCCC-CTTCCEEECS--------SSCCEEETTTSSSCCCHHHH-----HCTTCCCCCHHHH
T ss_pred             ccCCCCccC-CCCCeEEEcC--------CCCCccccccCCCccccccc-----ccCCCeEECcccC
Confidence            778876543 2345699999        89999999993111111111     1245689999994

>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Williams-Beuren syndrome transcription factor, WSTF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.53  E-value=0.22  Score=36.84  Aligned_cols=49  Identities=27%  Similarity=0.637  Sum_probs=34.8

Q ss_pred             eeeeccccCCCCCccEEecCCCCCCCCCcccchhhhhhhhhccccccccCCCccccceeEEeccCCCcc
Q 004714          162 CCICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECALKNERSGIGKDRCYSGLDGSFYCISCRKVN  230 (734)
Q Consensus       162 C~IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCALr~~~~G~~~~g~~~~lD~~f~C~~Cgk~s  230 (734)
                      |.||++-+   ++..+|.|+        .|..|-|+.|.--. +.        ...++.|+|..|...|
T Consensus         3 C~vC~~~~---~~~~~i~Cd--------~C~~~~H~~C~~p~-~~--------~~p~~~W~C~~C~~~t   51 (51)
T d1f62a_           3 CKVCRKKG---EDDKLILCD--------ECNKAFHLFCLRPA-LY--------EVPDGEWQCPACQPAT   51 (51)
T ss_dssp             CTTTCCSS---CCSCCEECT--------TTCCEECHHHHCTT-CC--------SCCSSCCSCTTTSCCC
T ss_pred             CcCcCCCC---CCCCEEEcC--------CCCCCCCCCCCCCC-CC--------cCCCCCEECcCCcCcC
Confidence            67888765   356789999        99999999996321 11        1235679999997543

>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: FYVE/PHD zinc finger
superfamily: FYVE/PHD zinc finger
family: PHD domain
domain: Sumoylation ligase E3, SIZ1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.77  E-value=0.14  Score=41.32  Aligned_cols=52  Identities=27%  Similarity=0.558  Sum_probs=30.8

Q ss_pred             eeeccccCCCCCccEEecCCCCCCCCCcccchhhhhhh-hhccccccccCCCccccceeEEeccCCC
Q 004714          163 CICRKYDDNKDPSLWLTCSSEPPFGGDSCGMSCHLECA-LKNERSGIGKDRCYSGLDGSFYCISCRK  228 (734)
Q Consensus       163 ~IC~kfD~nkd~~~Wl~C~s~~~~~~~~Cgh~cHleCA-Lr~~~~G~~~~g~~~~lD~~f~C~~Cgk  228 (734)
                      |||.+.+++ +.-+|+-|+        .|..|.|+.|. |.....+-.     ......|+|..|-.
T Consensus        19 C~C~~~~~~-~~~i~c~c~--------~C~~W~H~~Cvgi~~~~~~~~-----~~~~~~~~C~~C~~   71 (78)
T d1wewa_          19 CVCGNSLET-DSMIQCEDP--------RCHVWQHVGCVILPDKPMDGN-----PPLPESFYCEICRL   71 (78)
T ss_dssp             CSSCCCCCC-SCEEECSST--------TTCCEEEHHHHSCCCTTTCSC-----SCSCSSCCCHHHHH
T ss_pred             eECCCccCC-CcEEEEeCC--------CCCcCCCccccCccccccccc-----cCCCCEEECCCCcC
Confidence            367765542 334455555        89999999996 332222211     22334799999843

>d1xzwa1 b.1.12.1 (A:1-119) Purple acid phosphatase, N-terminal domain {Sweet potato (Ipomoea batatas) [TaxId: 4120]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Purple acid phosphatase, N-terminal domain
family: Purple acid phosphatase, N-terminal domain
domain: Purple acid phosphatase, N-terminal domain
species: Sweet potato (Ipomoea batatas) [TaxId: 4120]

Probab=80.95  E-value=0.96  Score=38.83  Aligned_cols=71  Identities=8%  Similarity=0.072  Sum_probs=38.7

Q ss_pred             ccCceEEEEEeeceeEEEEeCcCC-CCCCCcceEEEEeeecCCCCCCCCce--ee--ecC-----CceeEeecCCcceee
Q 004714          342 IVPNMVKFEDVRATSLTVVLGSED-PSPGNIISYTLWHRRAHEGFPARPTC--TL--FAP-----NTRFVVTGLCPATEY  411 (734)
Q Consensus       342 ~~~~~~rFE~vt~tSv~vvL~~~~-~s~~~i~Gy~LWhrks~~~y~~ept~--~~--~~p-----~~r~~vs~L~P~TEY  411 (734)
                      |.+-.+-|-+..+||++|-.-... .....    .+.|..+...+...-+.  ..  ...     .-+..++||.|.|.|
T Consensus        25 P~qvhl~~~~~~~tsm~VsW~T~~~~~~~~----~V~yG~~~~~~~~~a~g~s~~~~~~~~~~~~~H~v~LtgL~P~T~Y  100 (119)
T d1xzwa1          25 PQQVHITQGDYEGRGVIISWTTPYDKAGAN----KVFYWSENSKSQKRAMGTVVTYKYYNYTSAFIHHCTIKDLEYDTKY  100 (119)
T ss_dssp             CEEEEEEECSSSSSCEEEEEEESSCCTTTT----EEEEEETTCCCCEEEECEEECCEETTEECCEEEEEEECCCCTTCEE
T ss_pred             CCEEEEEecCCCCCEEEEEEECCCCCCCCC----EEEEcCCCCCCccEEEEEEEEeecccccCCeEEEEEECCCCCCCEE
Confidence            333445556667899999877532 22222    33344333221111111  11  001     136899999999999


Q ss_pred             eEEEE
Q 004714          412 QFKVV  416 (734)
Q Consensus       412 ~fkvv  416 (734)
                      .|||-
T Consensus       101 ~YrVG  105 (119)
T d1xzwa1         101 YYRLG  105 (119)
T ss_dssp             EEEEC
T ss_pred             EEEEC
Confidence            99984