Citrus Sinensis ID: 004779

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-
MDSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIILM
ccccccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEccccccccHHHHHHHHHHHHcccccccccEEEEccccccHHHHHHHHHHHHHHHccccEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHccccccccccccccccccEEEEEccccccccccccccccHHHHHHccccccccEEEEEccccccccHHHHHHccccccccccccccEEEEcccEEccccccccccccccEEEEcccccccccccccccccccEEEcccccccccccHHHccccccccccHHHHHHHHccccccccccHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHccccccEEEcccccccccccccccHHHHHHHcccccccccEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEcccccccHHHHccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHcEEcc
cccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHccccccccccEEEEEcccccccccEEEHHHHHHHHHccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEccccccccccccccccccEEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHccccccccEEEEEccccccccccccccccccEEEEEEEccccccccccEEEccccHEEHEHEccccccccccccccccHHHHccHHHHHHcccccccccHHHHHHHHHHHHHccccccccccccccEEcccccHHHHHccEEcccccEEEEEccccccccccccccHHHHHHHHHHHHcccEEEEEcccccEEEccccccHHHHHHHHHHcccccHcHHHHHHHHHHHHHHHcccccEcccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHcccEEEEccHHHHHHHHHHHHHHHHHcccEEEEEEEccccccccccHHHHHHHEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcccEEEc
mdsplplhvchvNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRaylwrpvsrtvfperlpeddklpaidvfictadpekepaiGVMNTVLSAMaldypvdklhvylsddggspitlHGMREACRFAKWwlpfcrrygikticpqayfseadsddyfgdseFMVEKKKIKEKYEMFEEHVTKAvedgeygnsqnHSTIIEIIQetfgesetirqadlvempllvyvsrekrpehlhHFKAGALNVLLRVSgvisnspyilgldcdmycndptsaRQAMCfhldpkissslafvqfpqkfhninkydiydgrfrSAYCVQwqgmdglkgpvlsgtgyyikreSLYAdfthtelkdtfgksNVLINSLHQSYkqnnangenfsnVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILhckgwtstyltpfrpqflgtsttNLNDLLIqgtrwgsgltdvglsrfcpllygpsrmSLLQSmcygelsffpllyclplwclatlpqlcllngislypevsspsfiVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLrkasflptnkvldkeqvkryemgqfdfqtssmflVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIvrkdkgrispsaiLLSSVFFMIFLFFGSIILM
MDSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFperlpeddklpAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAvedgeygnsqNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKasflptnkvldkeqVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIILM
MDSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVsspsfivfsfifisaiCKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIILM
*****PLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE***YG**QNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYK*******NFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIIL*
***PLPL*VCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYK********FSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLD**QVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIILM
MDSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIILM
****LPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIILM
ooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoo
oooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHo
iiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoo
SSSSSSSSSSSSSSSSSSiiHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooHHHHHHHHHHHHHHHHHHHiii
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHo
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MDSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILLSSVFFMIFLFFGSIILM
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query731 2.2.26 [Sep-21-2011]
Q651X7737 Cellulose synthase-like p yes no 0.939 0.932 0.365 1e-134
Q651X6728 Cellulose synthase-like p no no 0.938 0.942 0.372 1e-134
Q8VYR4722 Cellulose synthase-like p yes no 0.930 0.941 0.366 1e-131
Q570S7760 Cellulose synthase-like p no no 0.924 0.889 0.373 1e-129
Q0WVN5751 Cellulose synthase-like p no no 0.945 0.920 0.359 1e-127
Q0DXZ1745 Cellulose synthase-like p no no 0.885 0.868 0.360 1e-125
Q8VZK9729 Cellulose synthase-like p no no 0.927 0.930 0.339 1e-119
Q8LPK5985 Cellulose synthase A cata no no 0.954 0.708 0.330 1e-114
Q69P511055 Cellulose synthase A cata no no 0.938 0.650 0.321 1e-113
A2Z1C81055 Cellulose synthase A cata N/A no 0.938 0.650 0.321 1e-113
>sp|Q651X7|CSLE1_ORYSJ Cellulose synthase-like protein E1 OS=Oryza sativa subsp. japonica GN=CSLE1 PE=2 SV=2 Back     alignment and function desciption
 Score =  481 bits (1237), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 269/735 (36%), Positives = 410/735 (55%), Gaps = 48/735 (6%)

Query: 19  INRLHALLHCIAIGFLIYYRASYL--LQETRAIPIILWLLVFASELLLSFIWLLGRAYLW 76
           + R+ A      I  ++YYRA+ +    E RA     WL + A+EL  +  W++ ++  W
Sbjct: 27  VYRVQAATVAAGILLVLYYRATRVPAAGEGRAA----WLGMAAAELWFAVYWVIAQSVRW 82

Query: 77  RPVSRTVFPERLPE--DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVY 134
           RP  R  F +RL E  +  LP +D+F+CTADP+ EP   V++T+LS MA +YP +K+ VY
Sbjct: 83  RPFRRRTFRDRLAERYEQNLPGVDIFVCTADPQSEPPSLVISTILSVMAYNYPSEKISVY 142

Query: 135 LSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDDYFGDSEFMVEK 194
           LSDDGGS +T + + EA  FAK WLPFC+RY I+   P AYFSE+         +   E 
Sbjct: 143 LSDDGGSILTFYALWEASIFAKKWLPFCKRYNIEPRSPAAYFSESKVHHNLCIPK---EW 199

Query: 195 KKIKEKYEMFEEHVTKAVEDGEYGNS-----------------QNHSTIIEIIQETFGES 237
             IK  YE   E +  A   G+                     +NH  I++I+ +  G++
Sbjct: 200 ALIKNLYEEMRERIDTATMSGKIPEEMKLKHKGFDEWNSDFTLKNHQPIVQILID--GKN 257

Query: 238 ETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCN 297
                 D   +P +VYV+REKRP++ H+FKAGALN L+RVS VIS+SP IL +DCDMY N
Sbjct: 258 RNAIDDDRNVLPTMVYVAREKRPQYHHNFKAGALNALIRVSSVISDSPVILNVDCDMYSN 317

Query: 298 DPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGP 357
           +  S R A+CF LD ++   + FVQ+PQ F+N+ + DIY   F  +Y V+  G+D + G 
Sbjct: 318 NSDSIRDALCFFLDEEMGQKIGFVQYPQIFNNMTQNDIYGNSFNVSYHVEMCGLDSVGGC 377

Query: 358 VLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFSNVLQEETG 417
           +  GTG + +RE L       + K+ + +       + +  K+N        N ++E+  
Sbjct: 378 LYIGTGCFHRREILCGRIFSKDYKENWNR------GIKERGKEN-------INEIEEKAT 424

Query: 418 VLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLN 477
            L +C+YEH+T+WG ++G+ Y   +ED+ TG  +HC+GW S ++ P R  FLG + + L 
Sbjct: 425 SLVTCTYEHRTQWGNDIGVKYGFPAEDIITGLAIHCRGWESAFINPKRAAFLGLAPSTLA 484

Query: 478 DLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLP 537
             ++Q  RW  G   + LS++C  L+G  ++ L   M Y     +     LP      +P
Sbjct: 485 QNILQHKRWSEGNLTIFLSKYCSFLFGHGKIKLQLQMGYCICGLWA-ANSLPTLYYVVIP 543

Query: 538 QLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVT 597
            L L+ G  L+P++ SP    F ++F       L E + +G ++  W N QR+WM+KS+T
Sbjct: 544 SLGLVKGTPLFPQIMSPWATPFIYVFCVKTLYGLYEALLSGDTLKGWWNGQRMWMVKSIT 603

Query: 598 AHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLVPMVSLMILN 657
           ++ YG +DTI K +G+ K SF  T KV   ++ KRYE    +F +SS   V + ++ +LN
Sbjct: 604 SYLYGFIDTIRKCVGMSKMSFEVTAKVSGHDEAKRYEQEILEFGSSSPEYVIIATVALLN 663

Query: 658 MAALLCGFIRIIA-VGN--WDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPSAILL 714
              L+ G  +I+A V N  W+   PQ +L   I+IIN  I E M +RKD GRI P+A+ L
Sbjct: 664 FVCLVGGLSQIMAGVWNMPWNVFLPQAILCGMIVIINMPIYEAMFLRKDNGRI-PTAVTL 722

Query: 715 SSVFFMIFLFFGSII 729
           +S+ F++  F   I+
Sbjct: 723 ASIGFVMLAFLVPIV 737
Thought to be a Golgi-localized beta-glycan synthase that polymerize the backbones of noncellulosic polysaccharides (hemicelluloses) of plant cell wall.
Oryza sativa subsp. japonica (taxid: 39947)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: -
>sp|Q651X6|CSLE6_ORYSJ Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica GN=CSLE6 PE=2 SV=1 Back     alignment and function description
>sp|Q8VYR4|CSLG2_ARATH Cellulose synthase-like protein G2 OS=Arabidopsis thaliana GN=CSLG2 PE=2 SV=1 Back     alignment and function description
>sp|Q570S7|CSLG1_ARATH Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1 Back     alignment and function description
>sp|Q0WVN5|CSLG3_ARATH Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2 Back     alignment and function description
>sp|Q0DXZ1|CSLE2_ORYSJ Cellulose synthase-like protein E2 OS=Oryza sativa subsp. japonica GN=CSLE2 PE=2 SV=1 Back     alignment and function description
>sp|Q8VZK9|CSLE1_ARATH Cellulose synthase-like protein E1 OS=Arabidopsis thaliana GN=CSLE1 PE=1 SV=1 Back     alignment and function description
>sp|Q8LPK5|CESA8_ARATH Cellulose synthase A catalytic subunit 8 [UDP-forming] OS=Arabidopsis thaliana GN=CESA8 PE=1 SV=1 Back     alignment and function description
>sp|Q69P51|CESA9_ORYSJ Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1 Back     alignment and function description
>sp|A2Z1C8|CESA9_ORYSI Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query731
224111028 857 predicted protein [Populus trichocarpa] 0.997 0.850 0.603 0.0
359477703733 PREDICTED: cellulose synthase-like prote 0.983 0.980 0.614 0.0
297737188822 unnamed protein product [Vitis vinifera] 0.982 0.873 0.579 0.0
255576870762 cellulose synthase, putative [Ricinus co 0.957 0.918 0.613 0.0
356548660736 PREDICTED: cellulose synthase-like prote 0.969 0.963 0.605 0.0
356535446740 PREDICTED: cellulose synthase-like prote 0.964 0.952 0.604 0.0
359477392678 PREDICTED: cellulose synthase-like prote 0.909 0.980 0.572 0.0
429326514723 cellulose synthase-like protein [Populus 0.969 0.980 0.579 0.0
224111026723 predicted protein [Populus trichocarpa] 0.969 0.980 0.576 0.0
255576868711 cellulose synthase, putative [Ricinus co 0.953 0.980 0.570 0.0
>gi|224111028|ref|XP_002315722.1| predicted protein [Populus trichocarpa] gi|222864762|gb|EEF01893.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  952 bits (2461), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 491/813 (60%), Positives = 589/813 (72%), Gaps = 84/813 (10%)

Query: 1   MDSPLPLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQE--TRA-IPIILWLLV 57
           M+   PLH+CHV+  S+ INRLH LLH IAI FLIYYRAS+L QE  T+A +P++LWLLV
Sbjct: 46  MEISPPLHLCHVSKTSIFINRLHGLLHSIAIAFLIYYRASFLFQEPQTKATVPMLLWLLV 105

Query: 58  FASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAIDVFICTADPEKEPAIGVMNT 117
           F +ELLLSFIWL+G+AY W PVSRTVFPERLPEDDKLPAIDVFICT DP+KEP + VMNT
Sbjct: 106 FVAELLLSFIWLIGQAYHWHPVSRTVFPERLPEDDKLPAIDVFICTVDPDKEPTLDVMNT 165

Query: 118 VLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS 177
           VLSAMALDYP +KL++YLSDDGG+ +TLHGM+EA RFAK WLPFC++YGIKT CP+AYFS
Sbjct: 166 VLSAMALDYPAEKLNLYLSDDGGAAVTLHGMKEAWRFAKSWLPFCKKYGIKTRCPKAYFS 225

Query: 178 E-ADSDDYFGDS-EFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQ------NHSTIIE- 228
             +  DD FG S EFM +++ I+EKYE F+E V +  ED     ++      +H  +IE 
Sbjct: 226 ATSKDDDSFGSSNEFMADRQIIQEKYEDFKERVMRFREDFVLEETKSDITGRDHPALIEA 285

Query: 229 -------------------------------IIQETFGESETIRQADLVEMPLLVYVSRE 257
                                          +IQ+   E     +A+  EMPLLVYVSRE
Sbjct: 286 FLKKKELSPNWSLVIGKGKGGLTDAEHEADTVIQDNSNEEAPKDEAN--EMPLLVYVSRE 343

Query: 258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSS 317
           KRP H HHFKAGALNVLLRVSGVISNSP+IL LDCDMYCNDPTSARQAMCF  DP ISSS
Sbjct: 344 KRPSHPHHFKAGALNVLLRVSGVISNSPHILVLDCDMYCNDPTSARQAMCFFFDPNISSS 403

Query: 318 LAFVQFPQKFHNINKYDIYDGRFRSAYCVQ-------------WQGMDGLKGPVLSGTGY 364
           LAFVQFPQ+FHNI+K+DIYD + RS + V+             WQG+DGLKGPVLSGTG+
Sbjct: 404 LAFVQFPQRFHNISKHDIYDSQLRSTFGVRLVFIDFTLLNQILWQGLDGLKGPVLSGTGF 463

Query: 365 YIKRESLYADFTHT--------------------------ELKDTFGKSNVLINSLHQSY 398
           YIKR SLY D                              EL+DTFG SN  +NS+ Q+Y
Sbjct: 464 YIKRNSLYGDSMQKGLVLSNPNHAASSQHALDDPKSCNLLELRDTFGLSNEFVNSIRQNY 523

Query: 399 KQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTS 458
           K N  +  + S++L +ET +LASC Y   TKWGEE   LY SV+ED FTGFILHCKGW S
Sbjct: 524 KANPMSYGSVSSMLLQETRILASCDYPRHTKWGEEACFLYHSVAEDFFTGFILHCKGWLS 583

Query: 459 TYLTPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGE 518
            YL P RPQFLGTS T+LNDLLIQGTRW SGL +VGLSRFCPL+YG  RMS L+S+CY E
Sbjct: 584 VYLNPSRPQFLGTSITSLNDLLIQGTRWSSGLVEVGLSRFCPLIYGTLRMSFLESLCYAE 643

Query: 519 LSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTG 578
           +S FPL YCLPLWC AT+PQLCLLNGI LYP+VSS  FIVFSFIF+SA+ KHL EV+ +G
Sbjct: 644 ISLFPLFYCLPLWCFATIPQLCLLNGIPLYPKVSSSFFIVFSFIFLSAVSKHLYEVLKSG 703

Query: 579 GSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQF 638
           GSI     EQR+WM+KSV+ H YGS+D ++K +G+R+ASFLPTNK  D+E+ K Y+MG+F
Sbjct: 704 GSINTLVYEQRLWMMKSVSTHTYGSLDAVMKRIGVREASFLPTNKAADEEKFKLYQMGKF 763

Query: 639 DFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGM 698
           DF+TSSM LVPMV+++ILNMA+ + G IRII  GNWD +  Q+ LS YIL++N AI+EGM
Sbjct: 764 DFKTSSMLLVPMVTVIILNMASFVLGVIRIIIAGNWDSMVVQVFLSSYILVMNSAIIEGM 823

Query: 699 IVRKDKGRISPSAILLSSVFFMIFLFFGSIILM 731
            +RKDKG I  S I+LS+VF +IFL  GS  LM
Sbjct: 824 TIRKDKGCIPLSVIVLSTVFSIIFLCLGSFFLM 856

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|359477703|ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297737188|emb|CBI26389.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|255576870|ref|XP_002529321.1| cellulose synthase, putative [Ricinus communis] gi|223531245|gb|EEF33090.1| cellulose synthase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356548660|ref|XP_003542718.1| PREDICTED: cellulose synthase-like protein G2-like [Glycine max] Back     alignment and taxonomy information
>gi|356535446|ref|XP_003536256.1| PREDICTED: cellulose synthase-like protein G2-like [Glycine max] Back     alignment and taxonomy information
>gi|359477392|ref|XP_002280640.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|429326514|gb|AFZ78597.1| cellulose synthase-like protein [Populus tomentosa] Back     alignment and taxonomy information
>gi|224111026|ref|XP_002315721.1| predicted protein [Populus trichocarpa] gi|222864761|gb|EEF01892.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255576868|ref|XP_002529320.1| cellulose synthase, putative [Ricinus communis] gi|223531244|gb|EEF33089.1| cellulose synthase, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query731
TAIR|locus:2138116722 CSLG2 "AT4G24000" [Arabidopsis 0.943 0.955 0.367 4.7e-119
TAIR|locus:2138126760 CSLG1 "AT4G24010" [Arabidopsis 0.935 0.9 0.368 2.7e-116
TAIR|locus:2138106751 CSLG3 "AT4G23990" [Arabidopsis 0.956 0.930 0.355 3.1e-115
TAIR|locus:2012050729 CSLE1 "AT1G55850" [Arabidopsis 0.473 0.474 0.379 7e-113
TAIR|locus:2124167985 IRX1 "IRREGULAR XYLEM 1" [Arab 0.384 0.285 0.424 1.7e-105
TAIR|locus:2172457 1049 CESA4 "cellulose synthase A4" 0.384 0.267 0.405 1.5e-100
TAIR|locus:21789351026 IRX3 "IRREGULAR XYLEM 3" [Arab 0.384 0.273 0.408 6.3e-100
TAIR|locus:21760901084 CESA6 "cellulose synthase 6" [ 0.466 0.314 0.379 1.4e-99
TAIR|locus:21781931069 CESA5 "cellulose synthase 5" [ 0.480 0.328 0.369 3.6e-99
TAIR|locus:20400801065 CESA10 "cellulose synthase 10" 0.528 0.362 0.358 4.7e-99
TAIR|locus:2138116 CSLG2 "AT4G24000" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1172 (417.6 bits), Expect = 4.7e-119, P = 4.7e-119
 Identities = 271/737 (36%), Positives = 399/737 (54%)

Query:     7 LHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSF 66
             LH CH    ++   R++A+ H   I  L+Y+    ++     +   L LL   S+++L+F
Sbjct:    11 LHTCHPCRRTIPY-RIYAVFHTCGIIALMYHHVHSIVNANNTLITCLLLL---SDIVLAF 66

Query:    67 IWLLGRAYLWRPVSRTVFPERL---PEDDKLPAIDVFICTADPEKEPAIGVMNTVLSAMA 123
             +W    +    P+ RT +PE+    PED   P +DVFICTADP KEP + V+NT LS MA
Sbjct:    67 MWATTTSLRLNPIHRTEYPEKYAAKPED--FPKLDVFICTADPYKEPPMMVVNTALSVMA 124

Query:   124 LDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADSDD 183
              +YP  K+ VY+SDDGGS +TL  + EA +F+K WLPFC+   ++   P+ YFS      
Sbjct:   125 YEYPSHKISVYVSDDGGSSLTLFALMEAAKFSKHWLPFCKNNNVQDRSPEVYFSSKSHSS 184

Query:   184 YFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNS----QNHSTIIEIIQETFGESE- 238
                 S+   E + +K  YE  +  V   VE G+   +       S + ++  + F   + 
Sbjct:   185 ----SD---EAENLKMMYEDMKSRVEHVVESGKVETAFIACDQFSCVFDLWTDKFTRHDH 237

Query:   239 -TI---RQADLVEM-PLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCD 293
              TI    Q +  EM P L+YVSREK     HHFKAGALN LLRVS V++NSP IL LDCD
Sbjct:   238 PTIIMVLQHNETEMMPNLIYVSREKSKVSPHHFKAGALNTLLRVSAVMTNSPIILTLDCD 297

Query:   294 MYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDG 353
             MY N+PT+   A+C+  DPKI+  L FVQFPQKF  +NK DIY    +  + +   G DG
Sbjct:   298 MYSNNPTTPLHALCYLSDPKINFDLGFVQFPQKFQGVNKNDIYASELKRPFDINTVGFDG 357

Query:   354 LKGPVLSGTGYYIKRESLYADFTHTELKD--TFGKSNVLINSLHQSYKQNNANGENFSNV 411
             L GPV  GTG +  R + Y   T   L +  TFG + +       + K   A      ++
Sbjct:   358 LMGPVHMGTGCFFNRRAFYGPPTTLILPEIETFGPNRI-------ADKPIKAQ-----DI 405

Query:   412 LQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGT 471
             L     V A C+YE  T WG ++G  Y S+ ED FTGF+LHC+GW S + +P +  F G 
Sbjct:   406 LALAHDV-AGCNYECNTNWGSKIGFRYGSLVEDYFTGFMLHCEGWRSIFCSPTKAAFYGD 464

Query:   472 STTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLW 531
             S   L D++ Q  RW  GL +V  SR+ PL YG   +SLL S+ Y   +F+P  +C+PL 
Sbjct:   465 SPKCLTDVIGQQIRWSVGLLEVAFSRYNPLTYGIKPLSLLMSLGYCHYAFWPF-WCIPLV 523

Query:   532 CLATLPQLCLLNGISLYPEVXXXXXXXXXXXXXXXXCKHLQEVISTGGSIYAWRNEQRIW 591
                 LPQ+ L++G+S++P+                  + L + +  GG+   W N+QR+W
Sbjct:   524 VYGILPQVALIHGVSVFPKASDPWFWLYIILFLGGYAQDLSDFLLEGGTYRKWWNDQRMW 583

Query:   592 MIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLD-KEQVKRYEMGQFDFQTSSMFLVPM 650
             M++ +++ F+G  +  LK L L    +  T+K  D  EQ+KRYE   FDF  SS   +P+
Sbjct:   584 MVRGLSSFFFGFTEFTLKTLNLSTQGYNVTSKSNDDNEQMKRYEQEIFDFGPSSSMFLPI 643

Query:   651 VSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRISPS 710
              ++ I+N+ A + G   I   G    L  +L+L+ + ++    I E M++R D G++   
Sbjct:   644 TTVAIMNLLAFMRGLYGIFTWGEGPVL--ELMLASFAVVNCLPIYEAMVLRIDDGKLPKR 701

Query:   711 AILLSSVFFMIFLFFGS 727
                L+ +  + F+  GS
Sbjct:   702 ICFLAGL--LSFVLTGS 716
GO:0000271 "polysaccharide biosynthetic process" evidence=ISS
GO:0005794 "Golgi apparatus" evidence=ISM
GO:0016020 "membrane" evidence=IEA
GO:0016740 "transferase activity" evidence=ISS
GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS
GO:0016759 "cellulose synthase activity" evidence=ISS
GO:0016760 "cellulose synthase (UDP-forming) activity" evidence=IEA
GO:0030244 "cellulose biosynthetic process" evidence=IEA
TAIR|locus:2138126 CSLG1 "AT4G24010" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2138106 CSLG3 "AT4G23990" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2012050 CSLE1 "AT1G55850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2176090 CESA6 "cellulose synthase 6" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8VYR4CSLG2_ARATH2, ., 4, ., 1, ., -0.36680.93020.9418yesno
Q651X7CSLE1_ORYSJ2, ., 4, ., 1, ., -0.36590.93980.9321yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.4.10.691
4th Layer2.4.1.12LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_X0687
hypothetical protein (857 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query731
PLN02893734 PLN02893, PLN02893, Cellulose synthase-like protei 0.0
PLN021891040 PLN02189, PLN02189, cellulose synthase 1e-136
PLN02190756 PLN02190, PLN02190, cellulose synthase-like protei 1e-124
PLN024001085 PLN02400, PLN02400, cellulose synthase 1e-122
PLN02195977 PLN02195, PLN02195, cellulose synthase A 7e-80
PLN02915 1044 PLN02915, PLN02915, cellulose synthase A [UDP-form 2e-79
PLN024361094 PLN02436, PLN02436, cellulose synthase A 2e-78
PLN026381079 PLN02638, PLN02638, cellulose synthase A (UDP-form 2e-78
pfam03552716 pfam03552, Cellulose_synt, Cellulose synthase 5e-77
PLN022481135 PLN02248, PLN02248, cellulose synthase-like protei 1e-62
PLN02195977 PLN02195, PLN02195, cellulose synthase A 5e-54
PLN029151044 PLN02915, PLN02915, cellulose synthase A [UDP-form 7e-54
pfam03552716 pfam03552, Cellulose_synt, Cellulose synthase 3e-53
PLN024361094 PLN02436, PLN02436, cellulose synthase A 2e-49
PLN026381079 PLN02638, PLN02638, cellulose synthase A (UDP-form 5e-49
PLN02248 1135 PLN02248, PLN02248, cellulose synthase-like protei 2e-33
TIGR03030713 TIGR03030, CelA, cellulose synthase catalytic subu 2e-13
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 1e-11
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 5e-09
cd06421234 cd06421, CESA_CelA_like, CESA_CelA_like are involv 3e-08
PRK11498852 PRK11498, bcsA, cellulose synthase catalytic subun 1e-07
COG1215439 COG1215, COG1215, Glycosyltransferases, probably i 3e-06
TIGR03030 713 TIGR03030, CelA, cellulose synthase catalytic subu 5e-06
cd06423180 cd06423, CESA_like, CESA_like is the cellulose syn 0.001
PRK11498 852 PRK11498, bcsA, cellulose synthase catalytic subun 0.004
>gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein Back     alignment and domain information 
 Score =  629 bits (1623), Expect = 0.0
 Identities = 291/751 (38%), Positives = 423/751 (56%), Gaps = 54/751 (7%)

Query: 6   PLHVCHVNNLSVIINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLS 65
           PLH CH      I NR+ A+++  AI  L+Y+    LL  T     ++ LL+  ++++L+
Sbjct: 13  PLHTCHPMR-RTIANRVFAVVYSCAILALLYHHVIALLHSTT---TLITLLLLLADIVLA 68

Query: 66  FIWLLGRAYLWRPVSRTVFPERL----PEDDKLPAIDVFICTADPEKEPAIGVMNTVLSA 121
           F+W   +A+   PV R VF E L     E D  P +DVFICTADP KEP +GV+NT LS 
Sbjct: 69  FMWATTQAFRMCPVHRRVFIEHLEHYAKESD-YPGLDVFICTADPYKEPPMGVVNTALSV 127

Query: 122 MALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFSEADS 181
           MA DYP +KL VY+SDDGGS +TL    EA +FA  WLPFC++  I   CP+AYF  ++S
Sbjct: 128 MAYDYPTEKLSVYVSDDGGSKLTLFAFMEAAKFATHWLPFCKKNKIVERCPEAYF-SSNS 186

Query: 182 DDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNS--------------------Q 221
             +  ++E      +IK  YE  +  V   VE G+                        Q
Sbjct: 187 HSWSPETE------QIKMMYESMKVRVENVVERGKVSTDYITCDQEREAFSRWTDKFTRQ 240

Query: 222 NHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVI 281
           +H T+I+++ E    S   +      MP L+YVSREK     HHFKAGALN LLRVS  +
Sbjct: 241 DHPTVIQVLLE----SGKDKDITGHTMPNLIYVSREKSKNSPHHFKAGALNTLLRVSATM 296

Query: 282 SNSPYILGLDCDMYCNDPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFR 341
           +N+P IL LDCDMY NDP +  +A+C+ LDP +   L +VQFPQ FH INK DIY G  +
Sbjct: 297 TNAPIILTLDCDMYSNDPQTPLRALCYLLDPSMDPKLGYVQFPQIFHGINKNDIYAGELK 356

Query: 342 SAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQN 401
             + +   GMDGL GP   GTG + +R   Y   +   L +        +N  H   K  
Sbjct: 357 RLFQINMIGMDGLAGPNYVGTGCFFRRRVFYGGPSSLILPEIPE-----LNPDHLVDKSI 411

Query: 402 NANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYL 461
            +       VL     V A C+YE+QT WG ++G  Y S+ ED +TG+ L C+GW S + 
Sbjct: 412 KSQ-----EVLALAHHV-AGCNYENQTNWGSKMGFRYGSLVEDYYTGYRLQCEGWKSIFC 465

Query: 462 TPFRPQFLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYGPSRMSLLQSMCYGELSF 521
            P RP FLG S  NL+D+L Q  RW  GL +V  S++ P+ +G   + LL  + Y   +F
Sbjct: 466 NPKRPAFLGDSPINLHDVLNQQKRWSVGLLEVAFSKYSPITFGVKSIGLLMGLGYAHYAF 525

Query: 522 FPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSI 581
           +P ++ +P+   A LPQL LLNG+S++P+ S P F ++ F+F+ A  + L + + +GG+I
Sbjct: 526 WP-IWSIPITIYAFLPQLALLNGVSIFPKASDPWFFLYIFLFLGAYGQDLLDFLLSGGTI 584

Query: 582 YAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQ 641
             W N+QR+WMI+ +++  +G ++ +LK LG+    F  T+KV+D+EQ KRYE G F+F 
Sbjct: 585 QRWWNDQRMWMIRGLSSFLFGLVEFLLKTLGISTFGFNVTSKVVDEEQSKRYEQGIFEFG 644

Query: 642 TSSMFLVPMVSLMILNMAALLCGFIRIIAVGNWDKLFPQLLLSLYILIINFAIVEGMIVR 701
            SS   +P+ +  I+N+ + L G  +I    N + LF Q+ L+ + ++  + I E M++R
Sbjct: 645 VSSPMFLPLTTAAIINLVSFLWGIAQIFRQRNLEGLFLQMFLAGFAVVNCWPIYEAMVLR 704

Query: 702 KDKGRISPSAILLSSVFFMIFLFF-GSIILM 731
            D G++ P  I L S+     L+   S    
Sbjct: 705 TDDGKL-PVKITLISIVLAWALYLASSFAFK 734

Length = 734
>gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase Back     alignment and domain information
>gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase Back     alignment and domain information
>gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A Back     alignment and domain information
>gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information
>gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>gnl|CDD|133045 cd06423, CESA_like, CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 731
PLN026381079 cellulose synthase A (UDP-forming), catalytic subu 100.0
PLN024001085 cellulose synthase 100.0
PLN024361094 cellulose synthase A 100.0
PLN021891040 cellulose synthase 100.0
PLN02195977 cellulose synthase A 100.0
PLN029151044 cellulose synthase A [UDP-forming], catalytic subu 100.0
PLN02893734 Cellulose synthase-like protein 100.0
PLN022481135 cellulose synthase-like protein 100.0
PLN02190756 cellulose synthase-like protein 100.0
PF03552720 Cellulose_synt: Cellulose synthase; InterPro: IPR0 100.0
PRK11498 852 bcsA cellulose synthase catalytic subunit; Provisi 100.0
TIGR03030 713 CelA cellulose synthase catalytic subunit (UDP-for 100.0
PRK05454691 glucosyltransferase MdoH; Provisional 100.0
PRK14583444 hmsR N-glycosyltransferase; Provisional 100.0
cd04191254 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon 100.0
COG1215439 Glycosyltransferases, probably involved in cell wa 100.0
PRK11204420 N-glycosyltransferase; Provisional 100.0
TIGR03111439 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 100.0
PRK14716504 bacteriophage N4 adsorption protein B; Provisional 100.0
cd06437232 CESA_CaSu_A2 Cellulose synthase catalytic subunit 99.97
cd06421234 CESA_CelA_like CESA_CelA_like are involved in the 99.97
PRK11234 727 nfrB bacteriophage N4 adsorption protein B; Provis 99.97
cd06427241 CESA_like_2 CESA_like_2 is a member of the cellulo 99.97
cd06435236 CESA_NdvC_like NdvC_like proteins in this family a 99.96
PF13641228 Glyco_tranf_2_3: Glycosyltransferase like family 2 99.95
TIGR03472373 HpnI hopanoid biosynthesis associated glycosyl tra 99.95
cd04190244 Chitin_synth_C C-terminal domain of Chitin Synthas 99.94
cd02520196 Glucosylceramide_synthase Glucosylceramide synthas 99.93
PRK15489 703 nfrB bacteriophage N4 adsorption protein B; Provis 99.93
cd04192229 GT_2_like_e Subfamily of Glycosyltransferase Famil 99.93
cd06439251 CESA_like_1 CESA_like_1 is a member of the cellulo 99.92
cd06434235 GT2_HAS Hyaluronan synthases catalyze polymerizati 99.92
TIGR03469384 HonB hopene-associated glycosyltransferase HpnB. T 99.91
COG2943 736 MdoH Membrane glycosyltransferase [Cell envelope b 99.91
cd02525249 Succinoglycan_BP_ExoA ExoA is involved in the bios 99.86
cd06436191 GlcNAc-1-P_transferase N-acetyl-glucosamine transf 99.81
cd06438183 EpsO_like EpsO protein participates in the methano 99.81
PF13632193 Glyco_trans_2_3: Glycosyl transferase family group 99.76
cd04184202 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot 99.74
cd04195201 GT2_AmsE_like GT2_AmsE_like is involved in exopoly 99.71
cd06433202 GT_2_WfgS_like WfgS and WfeV are involved in O-ant 99.66
cd02510299 pp-GalNAc-T pp-GalNAc-T initiates the formation of 99.65
PLN02726243 dolichyl-phosphate beta-D-mannosyltransferase 99.65
cd04196214 GT_2_like_d Subfamily of Glycosyltransferase Famil 99.63
cd04186166 GT_2_like_c Subfamily of Glycosyltransferase Famil 99.62
cd02522221 GT_2_like_a GT_2_like_a represents a glycosyltrans 99.61
cd06420182 GT2_Chondriotin_Pol_N N-terminal domain of Chondro 99.61
cd06913219 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran 99.6
cd06442224 DPM1_like DPM1_like represents putative enzymes si 99.6
PF13506175 Glyco_transf_21: Glycosyl transferase family 21 99.57
PF03142527 Chitin_synth_2: Chitin synthase; InterPro: IPR0048 99.55
PRK10073328 putative glycosyl transferase; Provisional 99.54
cd04185202 GT_2_like_b Subfamily of Glycosyltransferase Famil 99.54
cd04188211 DPG_synthase DPG_synthase is involved in protein N 99.51
cd02526237 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr 99.51
cd06423180 CESA_like CESA_like is the cellulose synthase supe 99.49
PRK10018279 putative glycosyl transferase; Provisional 99.49
PRK10063248 putative glycosyl transferase; Provisional 99.47
PF00535169 Glycos_transf_2: Glycosyl transferase family 2; In 99.45
PTZ00260333 dolichyl-phosphate beta-glucosyltransferase; Provi 99.4
cd04179185 DPM_DPG-synthase_like DPM_DPG-synthase_like is a m 99.4
TIGR01556281 rhamnosyltran L-rhamnosyltransferase. Rhamnolipids 99.28
cd04187181 DPM1_like_bac Bacterial DPM1_like enzymes are rela 99.25
PRK10714325 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi 99.2
cd00761156 Glyco_tranf_GTA_type Glycosyltransferase family A 99.19
PRK13915306 putative glucosyl-3-phosphoglycerate synthase; Pro 99.18
PF10111281 Glyco_tranf_2_2: Glycosyltransferase like family 2 99.15
COG1216305 Predicted glycosyltransferases [General function p 99.14
KOG2571862 consensus Chitin synthase/hyaluronan synthase (gly 99.12
COG0463291 WcaA Glycosyltransferases involved in cell wall bi 98.83
cd02511229 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 98.81
KOG2547431 consensus Ceramide glucosyltransferase [Lipid tran 98.62
KOG2978238 consensus Dolichol-phosphate mannosyltransferase [ 98.15
KOG2977323 consensus Glycosyltransferase [General function pr 98.04
cd02514334 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es 97.85
PF02364 817 Glucan_synthase: 1,3-beta-glucan synthase componen 96.7
KOG3737603 consensus Predicted polypeptide N-acetylgalactosam 96.04
PF1370497 Glyco_tranf_2_4: Glycosyl transferase family 2 95.3
KOG3738559 consensus Predicted polypeptide N-acetylgalactosam 95.2
KOG3736578 consensus Polypeptide N-acetylgalactosaminyltransf 94.67
PF13712217 Glyco_tranf_2_5: Glycosyltransferase like family; 93.05
KOG0916 1679 consensus 1,3-beta-glucan synthase/callose synthas 89.87
PF03071434 GNT-I: GNT-I family; InterPro: IPR004139 The biosy 88.82
cd00899219 b4GalT Beta-4-Galactosyltransferase is involved in 86.38
PF03452269 Anp1: Anp1; InterPro: IPR005109 The members of thi 85.66
COG4092346 Predicted glycosyltransferase involved in capsule 85.53
PRK14503393 mannosyl-3-phosphoglycerate synthase; Provisional 80.12
>PLN02638 cellulose synthase A (UDP-forming), catalytic subunit Back     alignment and domain information 
Probab=100.00  E-value=4.7e-176  Score=1524.29  Aligned_cols=711  Identities=33%  Similarity=0.645  Sum_probs=660.3

Q ss_pred             CCCCceeeeecCchh-HHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhheeccc
Q 004779            3 SPLPLHVCHVNNLSV-IINRLHALLHCIAIGFLIYYRASYLLQETRAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSR   81 (731)
Q Consensus         3 ~~~~l~~~~~~~~~~-~~~r~~~~~~~~~~~~yl~wR~~~~l~~~~~~~~~~w~~l~~aE~~~~~~~~l~~~~~~~p~~r   81 (731)
                      ..+|||++++.++.. .+||+++++++++++++|+||+++..    .++.|+|+++++||+||+|+|+|+|+.||+|++|
T Consensus       253 ~~~pL~~~~~i~~~~~~~yR~~~~~~l~~l~~~l~yRi~~~~----~~~~~~Wl~s~~cE~WFaf~Wll~q~~Kw~Pv~R  328 (1079)
T PLN02638        253 ARQPLSRKVSIPSSRINPYRMVIVLRLVILCIFLHYRITNPV----RNAYALWLISVICEIWFALSWILDQFPKWLPVNR  328 (1079)
T ss_pred             CCCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHHhccC----CccHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence            377899999988873 67999999999999999999999853    3568999999999999999999999999999999


Q ss_pred             cCCCCCCCC-------CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHh
Q 004779           82 TVFPERLPE-------DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRF  154 (731)
Q Consensus        82 ~~~~~~l~~-------~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~f  154 (731)
                      .+++++|.+       ++++|.||||||||||++|||.+++|||+|+||+|||.||+.|||+|||++.+|+++|.||++|
T Consensus       329 ~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSDDGgS~LTf~AL~EAa~F  408 (1079)
T PLN02638        329 ETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALSETSEF  408 (1079)
T ss_pred             ccCHHHHHHHhccCCCcccCCCccEEEeCCCCccCccHHHHHHHHHHHhhcccccceeEEEecCCchHHHHHHHHHHHHH
Confidence            999988853       2469999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcchhhhhhcCcccCCcccccccC-CCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhh-------cCC---------C
Q 004779          155 AKWWLPFCRRYGIKTICPQAYFSEA-DSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVE-------DGE---------Y  217 (731)
Q Consensus       155 a~~w~pfc~~~~v~~r~p~~yf~~~-~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~-------~~~---------~  217 (731)
                      ||+||||||||+||||+|++||+.+ +..+++.+++|++||++||++|||||+|||.+.+       +|+         +
T Consensus       409 A~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~a~~~~~p~~~~~m~dgt~W~g  488 (1079)
T PLN02638        409 ARKWVPFCKKYNIEPRAPEWYFAQKIDYLKDKVQPSFVKDRRAMKREYEEFKVRINGLVAKAQKVPEEGWIMQDGTPWPG  488 (1079)
T ss_pred             HHhhcccccccCCCcCCHHHHhccCCCcccccCCchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCccccccCCccCCC
Confidence            9999999999999999999999998 5567788899999999999999999999998752       222         3


Q ss_pred             CCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCC
Q 004779          218 GNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCN  297 (731)
Q Consensus       218 ~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~  297 (731)
                      .+++|||+||||+++++++.    |.++.++|+|+||+||||||++||+||||||+++|+|++|||||||+|+||||++|
T Consensus       489 ~~~~dHp~IiqVll~~~~~~----d~~g~~lP~LVYVSREKRPg~~Hh~KAGAMNaLlRVSavmTNaPfILNLDCDmYiN  564 (1079)
T PLN02638        489 NNTRDHPGMIQVFLGHSGGL----DTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYIN  564 (1079)
T ss_pred             CCCCCCHHHHHHHhcCCCcc----ccccccccceEEEecccCCCCCcccccchHHHHHHHhhhccCCCeEeecccCcccC
Confidence            57899999999999997753    44677899999999999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHHhcCCCCCCcEEEEccCceeccCCCCchHHHHHHHHHHHHHHhhhhcCCccccceeEEEecccccc-ccc
Q 004779          298 DPTSARQAMCFHLDPKISSSLAFVQFPQKFHNINKYDIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYA-DFT  376 (731)
Q Consensus       298 ~p~~l~~~v~~f~D~~~~~~vg~VQ~Pq~f~n~~~~d~~~~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~-~~~  376 (731)
                      ||++++++||||+||+.++++||||+||+|+|++++|+|+|++++||+++++|+||+|||+||||||+|||+||+| .|+
T Consensus       565 ns~alr~AMCf~lDp~~g~~vafVQFPQrF~~i~k~D~Ygn~~~vffdi~~~GlDGlqGP~YvGTGC~fRR~ALYG~~p~  644 (1079)
T PLN02638        565 NSKALREAMCFLMDPNLGKSVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPP  644 (1079)
T ss_pred             chHHHHHhhhhhcCcccCCeeEEecCCcccCCCCCCCcccccceeeeccccccccccCCccccccCcceeehhhcCcCCc
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999998 442


Q ss_pred             hh---------------------------------------------------------------------hhhhhcCCc
Q 004779          377 HT---------------------------------------------------------------------ELKDTFGKS  387 (731)
Q Consensus       377 ~~---------------------------------------------------------------------~~~~~~~~~  387 (731)
                      ..                                                                     .+.++||+|
T Consensus       645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~S  724 (1079)
T PLN02638        645 IKPKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKSGKHVDPTVPVFNLEDIEEGVEGAGFDDEKSLLMSQMSLEKRFGQS  724 (1079)
T ss_pred             ccccccccccccccccccccccccccchhhccccccccccccccccccccccccccccccchhhhhhhhhhhhhhhcccc
Confidence            10                                                                     133679999


Q ss_pred             hhhhhhhhhhhcccCCCCCCchhhHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCe
Q 004779          388 NVLINSLHQSYKQNNANGENFSNVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQ  467 (731)
Q Consensus       388 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~  467 (731)
                      .++++|+..+.+..  +++..++++++||.+|+||.||++|+||+++||.|+|+|||+.||++||++||||+||+|++++
T Consensus       725 ~~fi~S~~~~~~~~--~~~~~~~s~l~eA~~V~sC~YE~~T~WG~evGw~YGSvTEDv~TG~rLH~rGWrSvY~~P~r~A  802 (1079)
T PLN02638        725 AVFVASTLMENGGV--PQSATPESLLKEAIHVISCGYEDKTDWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPA  802 (1079)
T ss_pred             HHHHHHHHHhhcCC--CCCCCcHHHHHHHHhhccCCCccCCchhhhcCeeecceecHHHHHHHHHcCCCcEEecCCCchH
Confidence            99999998776532  3345678999999999999999999999999999999999999999999999999999877789


Q ss_pred             eEeccCCChHHHhhhhhhhccccccccccccCCcccC-CCCCCHhHHHHhHhHhHhhHHhHHHHHHHHHHHHHHHHcCCc
Q 004779          468 FLGTSTTNLNDLLIQGTRWGSGLTDVGLSRFCPLLYG-PSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGIS  546 (731)
Q Consensus       468 ~~g~aP~~l~~~~~Qr~RWa~G~~qi~~~~~~pl~~~-~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~l~P~~~l~~g~~  546 (731)
                      +.|+||+|+.+++.||+|||+|++||+++|+||+++| .++|++.||++|+++++|| ++++|.++|+++|++||++|++
T Consensus       803 F~GlAP~~l~d~L~Qr~RWA~G~lqI~fsr~nPl~~G~~~rL~l~QRL~Yl~~~~yp-~~sip~liY~llP~l~Ll~G~~  881 (1079)
T PLN02638        803 FKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYP-ITSIPLLLYCTLPAVCLLTGKF  881 (1079)
T ss_pred             hcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHcCCc
Confidence            9999999999999999999999999999999999976 3789999999999999999 9999999999999999999999


Q ss_pred             cccccCchhHHHHHHHHHHHHHHHHHHHHHhCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcc
Q 004779          547 LYPEVSSPSFIVFSFIFISAICKHLQEVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLD  626 (731)
Q Consensus       547 ~~~~~~~~~~~~~~~l~~~~~~~~ll~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~  626 (731)
                      ++|+++.+++++|+++|+++++++++|++|+|.++++|||+||||+|.++++++++++++++|+||+++++|.||+|..+
T Consensus       882 i~P~vs~~~~~~f~~lfl~~~~~~llE~~wsG~si~~WWrnQr~w~I~~tSa~lfavl~~iLK~Lggs~~~F~VTsK~~d  961 (1079)
T PLN02638        882 IIPQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASD  961 (1079)
T ss_pred             cCCCccchHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhhhhheehhhhHHHHHHHHHHHHHHHccCcccceecccccc
Confidence            99999999889999999999999999999999999999999999999999999999999999999999999999999876


Q ss_pred             hhhhhhhcccceeecccchhhHHHHHHHHHHHHHHHHHHHHHhhcC--CcchhHHHHHHHHHHHHHHHHHHHHHhcccCC
Q 004779          627 KEQVKRYEMGQFDFQTSSMFLVPMVSLMILNMAALLCGFIRIIAVG--NWDKLFPQLLLSLYILIINFAIVEGMIVRKDK  704 (731)
Q Consensus       627 ~~~~~~~~~~~f~f~~~~~l~~P~~~l~~l~l~al~~g~~r~~~~~--~~~~~~~~~~~~~w~l~~l~p~~~al~~r~~k  704 (731)
                      .+..   .+++|+|+ |+++++|.++++++|++|+++|+++++..+  .|+.+++++++++|++++++||++|||+||  
T Consensus       962 ~~~~---~~ely~f~-wS~l~iP~ttl~iiNlvaiv~g~~~~~~~g~~~~~~~~~~~~~~~wvv~~l~Pf~kgl~gR~-- 1035 (1079)
T PLN02638        962 EDGD---FAELYMFK-WTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQ-- 1035 (1079)
T ss_pred             cccc---ccceeEec-ceehhHHHHHHHHHHHHHHHHHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHhccC--
Confidence            5432   25899999 999999999999999999999999998655  588999999999999999999999999997  


Q ss_pred             CCCchhHHHHHHHHHHHHHHHhhhhc
Q 004779          705 GRISPSAILLSSVFFMIFLFFGSIIL  730 (731)
Q Consensus       705 ~~~p~~~~~~s~~~~~~~~~~~~~~~  730 (731)
                      +|+|++|++||++++++|+++|+-|+
T Consensus      1036 ~r~P~~v~v~s~ll~~~~~l~~v~~~ 1061 (1079)
T PLN02638       1036 NRTPTIVVVWSILLASIFSLLWVRID 1061 (1079)
T ss_pred             CCCCeeehHHHHHHHHHHHHHHheec
Confidence            78899999999999999999998775

>PLN02400 cellulose synthase Back     alignment and domain information
>PLN02436 cellulose synthase A Back     alignment and domain information
>PLN02189 cellulose synthase Back     alignment and domain information
>PLN02195 cellulose synthase A Back     alignment and domain information
>PLN02915 cellulose synthase A [UDP-forming], catalytic subunit Back     alignment and domain information
>PLN02893 Cellulose synthase-like protein Back     alignment and domain information
>PLN02248 cellulose synthase-like protein Back     alignment and domain information
>PLN02190 cellulose synthase-like protein Back     alignment and domain information
>PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals Back     alignment and domain information
>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional Back     alignment and domain information
>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) Back     alignment and domain information
>PRK05454 glucosyltransferase MdoH; Provisional Back     alignment and domain information
>PRK14583 hmsR N-glycosyltransferase; Provisional Back     alignment and domain information
>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan Back     alignment and domain information
>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK11204 N-glycosyltransferase; Provisional Back     alignment and domain information
>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 Back     alignment and domain information
>PRK14716 bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex Back     alignment and domain information
>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose Back     alignment and domain information
>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily Back     alignment and domain information
>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase Back     alignment and domain information
>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A Back     alignment and domain information
>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI Back     alignment and domain information
>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin Back     alignment and domain information
>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis Back     alignment and domain information
>PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional Back     alignment and domain information
>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily Back     alignment and domain information
>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan Back     alignment and domain information
>TIGR03469 HonB hopene-associated glycosyltransferase HpnB Back     alignment and domain information
>COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan Back     alignment and domain information
>cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine Back     alignment and domain information
>cd06438 EpsO_like EpsO protein participates in the methanolan synthesis Back     alignment and domain information
>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 Back     alignment and domain information
>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis Back     alignment and domain information
>cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis Back     alignment and domain information
>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis Back     alignment and domain information
>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans Back     alignment and domain information
>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase Back     alignment and domain information
>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function Back     alignment and domain information
>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase Back     alignment and domain information
>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine Back     alignment and domain information
>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 Back     alignment and domain information
>PF13506 Glyco_transf_21: Glycosyl transferase family 21 Back     alignment and domain information
>PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 Back     alignment and domain information
>PRK10073 putative glycosyl transferase; Provisional Back     alignment and domain information
>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function Back     alignment and domain information
>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation Back     alignment and domain information
>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase Back     alignment and domain information
>cd06423 CESA_like CESA_like is the cellulose synthase superfamily Back     alignment and domain information
>PRK10018 putative glycosyl transferase; Provisional Back     alignment and domain information
>PRK10063 putative glycosyl transferase; Provisional Back     alignment and domain information
>PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional Back     alignment and domain information
>cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily Back     alignment and domain information
>TIGR01556 rhamnosyltran L-rhamnosyltransferase Back     alignment and domain information
>cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 Back     alignment and domain information
>PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional Back     alignment and domain information
>cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold Back     alignment and domain information
>PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information
>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] Back     alignment and domain information
>COG1216 Predicted glycosyltransferases [General function prediction only] Back     alignment and domain information
>KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide Back     alignment and domain information
>KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>KOG2978 consensus Dolichol-phosphate mannosyltransferase [General function prediction only] Back     alignment and domain information
>KOG2977 consensus Glycosyltransferase [General function prediction only] Back     alignment and domain information
>cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides Back     alignment and domain information
>PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>KOG3737 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13704 Glyco_tranf_2_4: Glycosyl transferase family 2 Back     alignment and domain information
>KOG3738 consensus Predicted polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG3736 consensus Polypeptide N-acetylgalactosaminyltransferase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B Back     alignment and domain information
>KOG0916 consensus 1,3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PF03071 GNT-I: GNT-I family; InterPro: IPR004139 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases Back     alignment and domain information
>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids Back     alignment and domain information
>PF03452 Anp1: Anp1; InterPro: IPR005109 The members of this family (Anp1, Van1 and Mnn9) are membrane proteins required for proper Golgi function Back     alignment and domain information
>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK14503 mannosyl-3-phosphoglycerate synthase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query731
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-05
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-04
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 47.2 bits (111), Expect = 2e-05
 Identities = 67/509 (13%), Positives = 130/509 (25%), Gaps = 203/509 (39%)

Query: 52  ILWLL---------VFASELL-LSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAID--V 99
           + W L          F  E+L +++ +L+                 +  + + P++   +
Sbjct: 67  LFWTLLSKQEEMVQKFVEEVLRINYKFLM---------------SPIKTEQRQPSMMTRM 111

Query: 100 FICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVY------------LSDDGGSPITLHG 147
           +I   D        + N             K +V             L       + + G
Sbjct: 112 YIEQRDR-------LYNDN-------QVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG 157

Query: 148 MR---------EACRFAK---------WWLPF--CRRYG-----IKTICPQA---YFSEA 179
           +          + C   K         +WL    C         ++ +  Q    + S +
Sbjct: 158 VLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRS 217

Query: 180 DSDD---------YFGDSEFMVEKK-----------KIKEKYEMFEEH----VT---KAV 212
           D                   +  K            +  + +  F       +T   K V
Sbjct: 218 DHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQV 277

Query: 213 EDGEYGNSQNHSTIIEIIQETFGESET---------IRQADL-VEM----PLLVYVSREK 258
            D     +  H ++      T    E           R  DL  E+    P  + +  E 
Sbjct: 278 TDFLSAATTTHISLDH-HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAES 336

Query: 259 RPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQ-----AMCFHLDPK 313
             + L  +         +++ +I +S  +L         +P   R+     ++ F     
Sbjct: 337 IRDGLATWDNWKHVNCDKLTTIIESSLNVL---------EPAEYRKMFDRLSV-FPPSAH 386

Query: 314 ISSS-LAFV----------QFPQKFHN---INK---------YDIYD------------- 337
           I +  L+ +              K H    + K           IY              
Sbjct: 387 IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH 446

Query: 338 ----GRFRSAYCVQWQGMDGLKGPVLSG-----TGYYIKR----------ESLYADFTHT 378
                 +           D L  P L        G+++K             ++ DF   
Sbjct: 447 RSIVDHYNIPKTFDS---DDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFL 503

Query: 379 ELK-----DTFGKSNVLINSLHQ--SYKQ 400
           E K       +  S  ++N+L Q   YK 
Sbjct: 504 EQKIRHDSTAWNASGSILNTLQQLKFYKP 532
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query731
4hg6_A 802 Cellulose synthase subunit A; membrane translocati 100.0
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 99.78
3bcv_A240 Putative glycosyltransferase protein; protein stru 99.77
1xhb_A472 Polypeptide N-acetylgalactosaminyltransferase 1; g 99.76
1qg8_A255 Protein (spore coat polysaccharide biosynthesis P 99.74
2d7i_A570 Polypeptide N-acetylgalactosaminyltransferase 10; 99.7
2ffu_A501 Ppgalnact-2, polypeptide N-acetylgalactosaminyltra 99.69
2z86_A625 Chondroitin synthase; GT-A, glycosyltransferase A, 99.66
3ckj_A329 Putative uncharacterized protein; mycobacteria, un 99.63
4fix_A657 UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 99.5
3l7i_A 729 Teichoic acid biosynthesis protein F; GT-B fold, m 99.49
2fy7_A287 Beta-1,4-galactosyltransferase 1; M339H mutant, AP 99.4
3f1y_A387 Mannosyl-3-phosphoglycerate synthase; GT-A type gl 99.37
2nxv_A249 ATP synthase subunits region ORF 6; majastridin, A 99.07
2bo4_A397 Mannosylglycerate synthase; catalysis, glycosyltra 98.65
2zu9_A394 Mannosyl-3-phosphoglycerate synthase; GT-A fold, g 97.96
1fo8_A343 Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetyl 97.88
2wvl_A391 Mannosyl-3-phosphoglycerate synthase; GT-A fold, t 97.8
3lw6_A287 FI08434P, beta-4-galactosyltransferase 7; protein- 89.63
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides} Back     alignment and structure
Probab=100.00  E-value=6e-56  Score=531.07  Aligned_cols=508  Identities=20%  Similarity=0.271  Sum_probs=380.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhhcccCC-CchhHHHHHHHHHHHHHHHHHHHHHHHHhheeccccCCCCCCCCCCCCCce
Q 004779           19 INRLHALLHCIAIGFLIYYRASYLLQET-RAIPIILWLLVFASELLLSFIWLLGRAYLWRPVSRTVFPERLPEDDKLPAI   97 (731)
Q Consensus        19 ~~r~~~~~~~~~~~~yl~wR~~~~l~~~-~~~~~~~w~~l~~aE~~~~~~~~l~~~~~~~p~~r~~~~~~l~~~~~~P~V   97 (731)
                      +..+++++.+++.+.|++||++.+++.. .+...++|++++++|+++.+.+++..+..++|..|...++.  .+++.|+|
T Consensus        65 ~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~--~~~~~P~V  142 (802)
T 4hg6_A           65 PRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL--QPEELPTV  142 (802)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC--CTTTCCCE
T ss_pred             hHHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC--CccCCCcE
Confidence            3444444555567789999999999864 35677889999999999999999999999999988765543  25678999


Q ss_pred             EEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccCCcccccc
Q 004779           98 DVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTICPQAYFS  177 (731)
Q Consensus        98 dV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r~p~~yf~  177 (731)
                      +|+|||   |||+++++++|+.|+++++||.++++|+|+|||++|.|.+.                              
T Consensus       143 SViIPt---yNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~------------------------------  189 (802)
T 4hg6_A          143 DILVPS---YNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMS------------------------------  189 (802)
T ss_dssp             EEEEEC---TTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTC------------------------------
T ss_pred             EEEEEE---CCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCcccccc------------------------------
Confidence            999999   99998888999999999999999999999999999977531                              


Q ss_pred             cCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCcEEEEecc
Q 004779          178 EADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPLLVYVSRE  257 (731)
Q Consensus       178 ~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~l~yv~R~  257 (731)
                              .+++.+++.++..+..+++..+                                         .++.|+.|+
T Consensus       190 --------~d~~i~~~~~~~~~~l~~~~~~-----------------------------------------~~v~~i~~~  220 (802)
T 4hg6_A          190 --------PDPELAQKAQERRRELQQLCRE-----------------------------------------LGVVYSTRE  220 (802)
T ss_dssp             --------SSHHHHHHHHHHHHHHHHHHHH-----------------------------------------HTCEEEECS
T ss_pred             --------CCHHHHHHHHhhhHHHHHHHHh-----------------------------------------cCcEEEEec
Confidence                    1233333221111111111111                                         137788887


Q ss_pred             CCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhc-CCCCCCcEEEEccCceeccCCCC---
Q 004779          258 KRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHL-DPKISSSLAFVQFPQKFHNINKY---  333 (731)
Q Consensus       258 k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~-D~~~~~~vg~VQ~Pq~f~n~~~~---  333 (731)
                      ++    +++|+||+|.+++.    ++||||+++|||++++ ||+|++++.+|. ||    ++++||+|+.+.|.++.   
T Consensus       221 ~~----~~GKa~alN~gl~~----a~gd~Il~lDaD~~~~-pd~L~~lv~~~~~dp----~v~~V~~~~~~~~~~~~~~~  287 (802)
T 4hg6_A          221 RN----EHAKAGNMSAALER----LKGELVVVFDADHVPS-RDFLARTVGYFVEDP----DLFLVQTPHFFINPDPIQRN  287 (802)
T ss_dssp             SC----CSHHHHHHHHHHHH----CCCSEEEECCTTEEEC-TTHHHHHHHHHHHSS----SCCEEECCCCBSSCCHHHHH
T ss_pred             CC----CCcchHHHHHHHHh----cCCCEEEEECCCCCcC-hHHHHHHHHHHhcCC----CeEEEeccEEEeCCchHhhh
Confidence            74    68999999999999    8999999999999997 999999999994 66    59999999999875311   


Q ss_pred             ----chHHHHHHHHHHHHHHhhhhcCCccccceeEEEeccccccccchhhhhhhcCCchhhhhhhhhhhcccCCCCCCch
Q 004779          334 ----DIYDGRFRSAYCVQWQGMDGLKGPVLSGTGYYIKRESLYADFTHTELKDTFGKSNVLINSLHQSYKQNNANGENFS  409 (731)
Q Consensus       334 ----d~~~~~~~~f~~~i~~g~dg~~~~~~~Gtg~~~RR~aL~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~  409 (731)
                          +.+.++...++...+.+.+.+++++++|+++++||+++++                                    
T Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~------------------------------------  331 (802)
T 4hg6_A          288 LALGDRCPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDE------------------------------------  331 (802)
T ss_dssp             HTCCTTSCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHH------------------------------------
T ss_pred             hhHHhhhhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHH------------------------------------
Confidence                1222345678899999999999999999999999999962                                    


Q ss_pred             hhHHHhhcccccceeeccccccccccccCCCccchHHHHHHHHhCCCEEEEeCCCCCeeEeccCCChHHHhhhhhhhccc
Q 004779          410 NVLQEETGVLASCSYEHQTKWGEEVGILYQSVSEDLFTGFILHCKGWTSTYLTPFRPQFLGTSTTNLNDLLIQGTRWGSG  489 (731)
Q Consensus       410 ~~~~~~~~~v~~c~ye~~t~~g~~~G~~~~svtED~~t~~rl~~~Gwrs~y~~~~~~~~~g~aP~~l~~~~~Qr~RWa~G  489 (731)
                                             .+||++++++||.+++++++++||++.|+++  +.+++.+|+++.++++||.||++|
T Consensus       332 -----------------------vGgf~~~~~~ED~~l~~rl~~~G~ri~~~~~--~~~~~~~p~t~~~~~~Qr~RW~~G  386 (802)
T 4hg6_A          332 -----------------------AGGFAGETITEDAETALEIHSRGWKSLYIDR--AMIAGLQPETFASFIQQRGRWATG  386 (802)
T ss_dssp             -----------------------HTTCCCSSSSHHHHHHHHHHTTTCCEEECCC--CCEEECCCCSHHHHHHHHHHHHHH
T ss_pred             -----------------------cCCcCCCCcchHHHHHHHHHHcCCeEEEecC--CEEEecCCCCHHHHHHHHHHHHcc
Confidence                                   4689999999999999999999999999986  899999999999999999999999


Q ss_pred             cccccccccCCcccCCCCCCHhHHHHhHhHhHhhHHhHHHHHHHHHHHHHHHHcCCccccccCchhHHHHHHHHHHHHHH
Q 004779          490 LTDVGLSRFCPLLYGPSRMSLLQSMCYGELSFFPLLYCLPLWCLATLPQLCLLNGISLYPEVSSPSFIVFSFIFISAICK  569 (731)
Q Consensus       490 ~~qi~~~~~~pl~~~~~~l~~~qrl~y~~~~~~~~l~~~~~l~~~l~P~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~~~  569 (731)
                      .+|+++. ++|++.  +++++.||++|+.+..++ +.+++.++++++|++++++|..++......+..    .++++++.
T Consensus       387 ~~q~l~~-~~pl~~--~~l~~~~rl~~l~~~~~~-~~~~~~li~ll~p~~~ll~~~~~~~~~~~~~~~----~~lp~~l~  458 (802)
T 4hg6_A          387 MMQMLLL-KNPLFR--RGLGIAQRLCYLNSMSFW-FFPLVRMMFLVAPLIYLFFGIEIFVATFEEVLA----YMPGYLAV  458 (802)
T ss_dssp             HHHHHHH-SCTTSC--SSCCHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHCCCCSCCCHHHHHH----HHHHHHHH
T ss_pred             HHHHHHH-hCcccc--CCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHHhhcCHHHHHH----HHHHHHHH
Confidence            9999984 578775  789999999999988888 888999999999999999999887643222222    22333322


Q ss_pred             HHH-HHHHhCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccCCcchhhhhhhcccceeecccchhhH
Q 004779          570 HLQ-EVISTGGSIYAWRNEQRIWMIKSVTAHFYGSMDTILKLLGLRKASFLPTNKVLDKEQVKRYEMGQFDFQTSSMFLV  648 (731)
Q Consensus       570 ~ll-~~~~~g~~~~~ww~~~~~w~i~~~~~~~~~~~~al~~~l~~~~~~F~VT~K~~~~~~~~~~~~~~f~f~~~~~l~~  648 (731)
                      ..+ .....|.....||... ++    +...++.+...+..++++++.+|+||+|+.+.++      ..     .+.+++
T Consensus       459 ~~~~~~~~~~~~r~~~~~~l-~~----~~~~~~~~~a~l~~l~~~~~~~f~VT~Kg~~~~~------~~-----~~~~~~  522 (802)
T 4hg6_A          459 SFLVQNALFARQRWPLVSEV-YE----VAQAPYLARAIVTTLLRPRSARFAVTAKDETLSE------NY-----ISPIYR  522 (802)
T ss_dssp             HHHHHHHHHTTTSCTTHHHH-HH----HHHHHHHHHHHHHHHHSTTCCCCCCCCCCCCCSS------CC-----BCTTCH
T ss_pred             HHHHHHHHhcCcHHHHHHHH-HH----HHHHHHHHHHHHHHHhCCCCCcceECCCCccccc------cc-----hhhHHH
Confidence            221 1122344334465442 22    2234455555666778889999999999986543      11     125678


Q ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCC-cchhHHHHHHHHHHHHHHHHHHHHHhcccCCCCCc
Q 004779          649 PMVSLMILNMAALLCGFIRIIAVGN-WDKLFPQLLLSLYILIINFAIVEGMIVRKDKGRIS  708 (731)
Q Consensus       649 P~~~l~~l~l~al~~g~~r~~~~~~-~~~~~~~~~~~~w~l~~l~p~~~al~~r~~k~~~p  708 (731)
                      |++++++++++++++|++++..... ......+++|++++++.+.+.+.+.+.|+.+++-|
T Consensus       523 p~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~l~~l~~~~~~~~~~~~~R~~~  583 (802)
T 4hg6_A          523 PLLFTFLLCLSGVLATLVRWVAFPGDRSVLLVVGGWAVLNVLLVGFALRAVAEKQQRRAAP  583 (802)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHTTTBCCCCSCCCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhccCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCccccc
Confidence            9999999999999999999875432 12233344444444444444444444444444433
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis} Back     alignment and structure
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17 Back     alignment and structure
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A* Back     alignment and structure
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A* Back     alignment and structure
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A* Back     alignment and structure
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A* Back     alignment and structure
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A Back     alignment and structure
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A* Back     alignment and structure
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A* Back     alignment and structure
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ... Back     alignment and structure
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A* Back     alignment and structure
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A* Back     alignment and structure
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A* Back     alignment and structure
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A* Back     alignment and structure
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A* Back     alignment and structure
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A* Back     alignment and structure
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query731
d1xhba2328 Polypeptide N-acetylgalactosaminyltransferase 1, N 99.8
d1qg8a_255 Spore coat polysaccharide biosynthesis protein Sps 99.56
d1omza_265 Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga 99.28
d2bo4a1381 Mannosylglycerate synthase, MGS {Rhodothermus mari 97.75
d1fo8a_343 N-acetylglucosaminyltransferase I {Rabbit (Oryctol 92.84
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=1.3e-19  Score=190.99  Aligned_cols=118  Identities=19%  Similarity=0.062  Sum_probs=94.8

Q ss_pred             CCCCCceEEEEecCCCCCCchHHHHHHHHHHHcCCCCCCCeEEEEEcCCCCccchhhHHHHHHhhhcchhhhhhcCcccC
Q 004779           91 DDKLPAIDVFICTADPEKEPAIGVMNTVLSAMALDYPVDKLHVYLSDDGGSPITLHGMREACRFAKWWLPFCRRYGIKTI  170 (731)
Q Consensus        91 ~~~~P~VdV~I~t~~pynEp~~~v~~Tv~s~l~~dYP~~kl~v~v~DDg~~~~T~~~l~Ea~~fa~~w~pfc~~~~v~~r  170 (731)
                      +++.|.|+|+||+   |||....+.+||.|+++++||....||+|+||||+|.|.....|.                   
T Consensus        18 ~~~~P~vSIIIp~---yNe~~~~l~~~l~Si~~qt~~~~~~EIIvVDdgS~d~~~~~~l~~-------------------   75 (328)
T d1xhba2          18 PDNLPTTSVVIVF---HNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLES-------------------   75 (328)
T ss_dssp             CSCCCCEEEEEEE---SSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHH-------------------
T ss_pred             CCCCCCEEEEEec---cCCcHHHHHHHHHHHHhcCCCCCCeEEEEEECCCChhhHHHHHHH-------------------
Confidence            4678999999999   999877899999999999999866799999999999765422221                   


Q ss_pred             CcccccccCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCCCCcchhhhhhcccCcchhhhhccccCCCc
Q 004779          171 CPQAYFSEADSDDYFGDSEFMVEKKKIKEKYEMFEEHVTKAVEDGEYGNSQNHSTIIEIIQETFGESETIRQADLVEMPL  250 (731)
Q Consensus       171 ~p~~yf~~~~~~~~~~~~~~~~e~~~~k~~y~~~~~ri~~~~~~~~~~~~~~h~~i~~v~~~~~~~~~~~~~~~~~~~P~  250 (731)
                                                    |.+                                          ...+.
T Consensus        76 ------------------------------~~~------------------------------------------~~~~~   83 (328)
T d1xhba2          76 ------------------------------YVK------------------------------------------KLKVP   83 (328)
T ss_dssp             ------------------------------HHH------------------------------------------SSSSC
T ss_pred             ------------------------------HHH------------------------------------------hcCCC
Confidence                                          100                                          00123


Q ss_pred             EEEEeccCCCCCCCCChHHHHHHHHHhcCCCCCCCEEEEeCCCCCCCChHHHHHHHHHhcCC
Q 004779          251 LVYVSREKRPEHLHHFKAGALNVLLRVSGVISNSPYILGLDCDMYCNDPTSARQAMCFHLDP  312 (731)
Q Consensus       251 l~yv~R~k~p~~~~~~KAGaLN~~l~~s~~~t~g~~il~lDaD~~~~~p~~l~~~v~~f~D~  312 (731)
                      +.++..++     +.|+++|.|.|++.    ++||+|+++|+|.++. |++|.+++..|.+.
T Consensus        84 i~vi~~~~-----n~G~~~a~N~Gi~~----a~gd~i~flD~D~~~~-p~~l~~l~~~~~~~  135 (328)
T d1xhba2          84 VHVIRMEQ-----RSGLIRARLKGAAV----SRGQVITFLDAHCECT-AGWLEPLLARIKHD  135 (328)
T ss_dssp             EEEEECSS-----CCCHHHHHHHHHHH----CCSSEEEEEESSEEEC-TTCHHHHHHHHHHC
T ss_pred             eEEEEecc-----cccchHHHHHHHHh----hhcceeeecCcccccC-hhHHHHHHHHHhcC
Confidence            66665554     46899999999999    9999999999999997 99999999988754
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Back     information, alignment and structure
>d1fo8a_ c.68.1.10 (A:) N-acetylglucosaminyltransferase I {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Back     information, alignment and structure