Citrus Sinensis ID: 004821

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------73
MGKNIREVGVVDLVKVGLKVDEAEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHPHGLHQLLYYSVYNDWDASINGPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTSFSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHELSVRSRI
cccccccccHHHHHHccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHcccccccccHHHEEEEEEccccccccccccccccccHHHHHHccHHHHHHHHccccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHccccEEEcccccccccccccccccccccccHHHcccccccccccccccccEEEEEEccccccccccEEcHHHHHHHHHHHHHHHHHccccccEEEEEccccHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHccccEEEEEcccccccccccccHHHHHHHccccEEEEEEcccccccccccccccHHHHHHcccccccccccccccccccccEEEEEccccccccccccccccHHHHHHHHHccccccccccEEEEcccccccccHHHHHHHHccccEEEEEccccccccccHHHHHccccEEEEcHHHHHHHHccccccccccccEEccccccccccHHHHHHHHHccccccccccccHHHccccccccccccccccccccccccccEEEEEcccccccccccccEEEEEEEcccccccccccccccHHHHHcccccccccEEEEcccEEEEcccccEEEEcccccEEEcccccccHHHHHHHHccccccccEEEEcccccccccccEEEEEEEEccccccccHHHHHHHHHHHHHHHcccccccccEEEcccccccccHHHHHHHHHHHHcccccccccc
ccccHHEEcHHHHHHccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccccccEEEEEEEEcccccccccccccccccHHHHHHHccccccccccHHHHHHHHcccHHHHHHHHHHHHHcHHHHHHHHHHHccEEEEcccHHEccccccccccEEEEcccEEEEEEEccccccccccccccEEEEEEccccccccccEEEHHHHHHHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHcccEEEEEcccccccccEEccHHHHHHHHccccEEEEEEccccEEccccccccHHHHHHcccccccccccccccccccccEEEEEEcccccccccEEEccccHHHHHHHcEEEEccccccEEEEEccEEEEccEEEEEcccccccEEEEEccccccHHHHHHHHHcccEEEEccHHHHHHHHHccccccccHHHHEEEccccccccHHHHHHHHHHHccccEEEEEcEcccccEEEccccccccccccccccccccEEEEEcccccccccccccccEEEEEcccccHHHHHHcccHHHHHHHccccccccEEEEEEEEEEEcccccEEEEEEHHHcEEEccEEEcHHHHHHHHHHccHHHHHHEEEccccccccccEEEEEEEEcccccccccHHHHHHHHHHHHHHHcccccccEEEEcccccccccHHHHHHHHHHHHcccccccccc
mgknirevGVVDLVKVGLKVDEAEDFDNILKQLIdgskgldpkEIWKELVARkvfkpwhphglhqlLYYSVyndwdasingpplywfpsldqskltnlghameihgpkflgamykdpftsfslfqkftvEHPEAYWEIVLKEISVKfheapkcildrtdkskhggtwlpgsvlnvaeccllpssrlrkeddsVAVVWRedrcddssvnrmTYKELRERVMLVANALDTMFskgdaiaidmpMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKakgiftqdfilrggrkfplyskvaeagplkaVVLPvigddvgiqlrqqdvswkdflscvdyhpgpkyyppvyrpvdSVINILfssgttgepkaipwtqlspircaaeawghidmkvgdvycwptnlgwvmgPIILFSSFLSGAALALyhgsplersfgkfvqdsgvsvlgTVPSLVKAWkntnclqgldwtkirsfastgetsnvdddLWLASKAYYKpiieccggtelassyiqgsmlqpqafgafstatmTTGFVIldelgvpypddqpcvgevglfplylgatdrllnadheevyfsgmpiykgmhlrrHGDIIKRTVGGYIIVqgraddtmnlggiktssVEIERVCDGADESILETAAisvspagggpEVLVICVVLkkgftsqpvdKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHelsvrsri
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
MGKNIRevgvvdlvkvglkvdeAEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHPHGLHQLLYYSVYNDWDASINGPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTSFSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHELSVRSRI
*****REVGVVDLVKVGLKVDEAEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHPHGLHQLLYYSVYNDWDASINGPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTSFSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVL**************
******E**VVDLVKVGLKVDEAEDFDNILKQLI**********IWKELVARKVFKPWHPHGLHQLLYYSVYNDWDASINGPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTSFSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHE*******
MGKNIREVGVVDLVKVGLKVDEAEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHPHGLHQLLYYSVYNDWDASINGPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTSFSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQL**********
***NIREVGVVDLVKVGLKVDEAEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHPHGLHQLLYYSVYNDWDASINGPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTSFSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKH********
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MGKNIREVGVVDLVKVGLKVDEAEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHPHGLHQLLYYSVYNDWDASINGPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTSFSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHELSVRSRI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query728 2.2.26 [Sep-21-2011]
Q84P17727 Probable acyl-activating yes no 0.995 0.997 0.701 0.0
F4KBF3721 Probable acyl-activating no no 0.971 0.980 0.497 0.0
Q88EH6653 Acetyl-coenzyme A synthet yes no 0.791 0.882 0.259 5e-41
Q8Z1R0652 Acetyl-coenzyme A synthet N/A no 0.714 0.797 0.273 9e-40
Q8ZKF6652 Acetyl-coenzyme A synthet yes no 0.714 0.797 0.272 2e-39
Q885K7651 Acetyl-coenzyme A synthet yes no 0.798 0.892 0.257 7e-39
Q4ZQG8651 Acetyl-coenzyme A synthet yes no 0.798 0.892 0.257 8e-39
A1JIK3652 Acetyl-coenzyme A synthet yes no 0.715 0.799 0.270 1e-38
A8FUF1650 Acetyl-coenzyme A synthet yes no 0.780 0.873 0.255 1e-38
Q9I558651 Acetyl-coenzyme A synthet yes no 0.799 0.894 0.254 3e-38
>sp|Q84P17|AEE18_ARATH Probable acyl-activating enzyme 18, peroxisomal OS=Arabidopsis thaliana GN=AAE18 PE=2 SV=1 Back     alignment and function desciption
 Score = 1068 bits (2761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 512/730 (70%), Positives = 600/730 (82%), Gaps = 5/730 (0%)

Query: 1   MGKNIREVGVVDLVKVGLKVDEAEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHP 60
           M K+I E+   D VK GL +++A++FD ++  +I  +   DP++ WK LV   V KPWHP
Sbjct: 1   MWKSIGELSCDDYVKAGLTLEDAKEFDKLVSDVITKAIETDPRDQWKALVDESVLKPWHP 60

Query: 61  HGLHQLLYYSVYNDWDASINGPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTS 120
           H LHQLLYYSVY++WD+S++GPPLYWFPSL QSK TNLG  ME HGP+ LG  YK+P  S
Sbjct: 61  HPLHQLLYYSVYSNWDSSVHGPPLYWFPSLSQSKSTNLGKLMEYHGPRLLGPSYKNPLES 120

Query: 121 FSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCL 180
           F LF++F+VEHPE YW  V+ E+S+ FH  P+CIL+   KSK  GTWLP +VLN+AECCL
Sbjct: 121 FELFRRFSVEHPEVYWSFVIDELSLVFHTPPRCILN---KSKPEGTWLPDAVLNIAECCL 177

Query: 181 LPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTMFSKGDAIAIDM 240
           +PSS  +KEDDSVAVVWR +  DDS VNRMT KELRE+VMLVANA+   F KGD IAIDM
Sbjct: 178 MPSSHPKKEDDSVAVVWRNEGFDDSPVNRMTIKELREQVMLVANAISGSFEKGDTIAIDM 237

Query: 241 PMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLY 300
           PMTV AVIIYLAIILAG +VVSIADSFAA+EIATRL++SKAKGIFTQD+ILRGGR+FPLY
Sbjct: 238 PMTVDAVIIYLAIILAGCIVVSIADSFAAKEIATRLKISKAKGIFTQDYILRGGRRFPLY 297

Query: 301 SKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHP-GPKYYPPVYRPVDSVI 359
           S+V EA P K +VLP  G ++ +QLR+QDVSW DFLS    H  G  YY P+Y PV+SVI
Sbjct: 298 SRVVEAAPSKVIVLPASGTELHVQLREQDVSWMDFLSNAKPHSSGENYYRPIYLPVESVI 357

Query: 360 NILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSF 419
           NILFSSGTTGEPKAIPWTQLSPIR A + W H+D++VG  YCWPTNLGWVMGP ++FS F
Sbjct: 358 NILFSSGTTGEPKAIPWTQLSPIRSACDGWAHLDVQVGHTYCWPTNLGWVMGPTLMFSCF 417

Query: 420 LSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFAST 479
           L+GA LALY GSPL R FGKFVQD+GV+VLGTVPSLVK WK TNC++GL+WTKI+ FA+T
Sbjct: 418 LTGATLALYSGSPLGRGFGKFVQDAGVTVLGTVPSLVKTWKRTNCMEGLNWTKIKFFATT 477

Query: 480 GETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVIL 539
           GE SNVDD LWL+SKA YKP+IECCGGTELASSYI GS LQPQAFGAFST +MTT  +I 
Sbjct: 478 GEASNVDDVLWLSSKADYKPVIECCGGTELASSYIIGSPLQPQAFGAFSTPSMTTRIIIF 537

Query: 540 DELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKR 599
           DE GVPYPDDQPC GEVGLFP +LGATDRLLNA+H+EVYF GMP+YK   LRRHGDI+KR
Sbjct: 538 DENGVPYPDDQPCTGEVGLFPQHLGATDRLLNANHDEVYFKGMPMYKETRLRRHGDIVKR 597

Query: 600 TVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVIC 659
           TVGGY  VQGRADDTMNLGGIKTSS+EIERVCD ADE I ETAA++++P  GGPE+LVI 
Sbjct: 598 TVGGYYNVQGRADDTMNLGGIKTSSIEIERVCDQADECISETAAVTLTPPNGGPELLVIF 657

Query: 660 VVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLK 719
            VLK+GF  Q  ++LKM FS+ IQ++LNPLFKVS VKIV EFPRTAS+KLLRRVL+DQ+K
Sbjct: 658 AVLKEGFKQQSGEELKMKFSRTIQKDLNPLFKVSFVKIVPEFPRTASSKLLRRVLRDQIK 717

Query: 720 HE-LSVRSRI 728
            E LS+RSRI
Sbjct: 718 QELLSLRSRI 727
May be involved in the peroxisomal activation of 2,4-dichlorophenoxybutyric acid (2,4-DB), a precursor of active auxins that inhibit root growth.
Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 2EC: .EC: 1EC: .EC: -
>sp|F4KBF3|AAE17_ARATH Probable acyl-activating enzyme 17, peroxisomal OS=Arabidopsis thaliana GN=AAE17 PE=2 SV=1 Back     alignment and function description
>sp|Q88EH6|ACSA1_PSEPK Acetyl-coenzyme A synthetase 1 OS=Pseudomonas putida (strain KT2440) GN=acsA1 PE=3 SV=1 Back     alignment and function description
>sp|Q8Z1R0|ACSA_SALTI Acetyl-coenzyme A synthetase OS=Salmonella typhi GN=acs PE=3 SV=1 Back     alignment and function description
>sp|Q8ZKF6|ACSA_SALTY Acetyl-coenzyme A synthetase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=acs PE=1 SV=1 Back     alignment and function description
>sp|Q885K7|ACSA_PSESM Acetyl-coenzyme A synthetase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=acsA PE=3 SV=1 Back     alignment and function description
>sp|Q4ZQG8|ACSA_PSEU2 Acetyl-coenzyme A synthetase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=acsA PE=3 SV=1 Back     alignment and function description
>sp|A1JIK3|ACSA_YERE8 Acetyl-coenzyme A synthetase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=acs PE=3 SV=1 Back     alignment and function description
>sp|A8FUF1|ACSA_SHESH Acetyl-coenzyme A synthetase OS=Shewanella sediminis (strain HAW-EB3) GN=acsA PE=3 SV=1 Back     alignment and function description
>sp|Q9I558|ACSA1_PSEAE Acetyl-coenzyme A synthetase 1 OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=acsA1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query728
225435726727 PREDICTED: acetyl-coenzyme A synthetase 0.998 1.0 0.762 0.0
380042388727 acyl-activating enzyme 14 [Cannabis sati 0.993 0.994 0.751 0.0
380042368723 acyl-activating enzyme 4, partial [Canna 0.991 0.998 0.729 0.0
380042386715 acyl-activating enzyme 13 [Cannabis sati 0.978 0.995 0.717 0.0
297746452685 unnamed protein product [Vitis vinifera] 0.940 1.0 0.714 0.0
449503441725 PREDICTED: probable acyl-activating enzy 0.995 1.0 0.678 0.0
449448834725 PREDICTED: probable acyl-activating enzy 0.995 1.0 0.688 0.0
449503439725 PREDICTED: probable acyl-activating enzy 0.995 1.0 0.688 0.0
449448832725 PREDICTED: probable acyl-activating enzy 0.995 1.0 0.677 0.0
145336784727 acyl-activating enzyme 18 [Arabidopsis t 0.995 0.997 0.701 0.0
>gi|225435726|ref|XP_002285701.1| PREDICTED: acetyl-coenzyme A synthetase [Vitis vinifera] gi|297746451|emb|CBI16507.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1179 bits (3051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 555/728 (76%), Positives = 642/728 (88%), Gaps = 1/728 (0%)

Query: 1   MGKNIREVGVVDLVKVGLKVDEAEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHP 60
           MG  + EVGV +LVK GL ++EA++F+ ILK  + G++G DP E+W+E+VAR+V  P HP
Sbjct: 1   MGMRVAEVGVGELVKAGLSMEEAQEFERILKAAVGGARGSDPSEVWREVVARRVLSPSHP 60

Query: 61  HGLHQLLYYSVYNDWDASINGPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTS 120
           HGLH+L+++SVY +WD SI GPPLYWFPSL +S  TNLG  ME +GP+ LG  YKDP TS
Sbjct: 61  HGLHRLVFHSVYAEWDESIRGPPLYWFPSLYESMHTNLGRLMETYGPRLLGLSYKDPITS 120

Query: 121 FSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCL 180
           +SLFQKF+V++ E YW +VLKE+SV FH AP+CILD TDKSKHGGTWLPG+VLN+AECCL
Sbjct: 121 YSLFQKFSVQNLEVYWSMVLKELSVLFHRAPRCILDTTDKSKHGGTWLPGAVLNIAECCL 180

Query: 181 LPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTMFSKGDAIAIDM 240
           LP S  RK D+S+AVVWR++  DDS VNR+T KELRE+VM+VAN LD  FSKGDAIAIDM
Sbjct: 181 LPVSYPRKHDNSLAVVWRDEGNDDSPVNRLTLKELREQVMMVANVLDATFSKGDAIAIDM 240

Query: 241 PMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLY 300
           PMTVHAVIIYLAI+LAG+VVVSIADSFAA+EIATRL VSKAKGIFTQDFI+RGGRKFPLY
Sbjct: 241 PMTVHAVIIYLAIVLAGFVVVSIADSFAAKEIATRLHVSKAKGIFTQDFIVRGGRKFPLY 300

Query: 301 SKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVIN 360
           S+V EA P K +VLP IG DV +QLR+QD+SWKDFLS  D+ P P  Y PVY+P+D+V N
Sbjct: 301 SRVVEAAPHKVIVLPAIGTDVDVQLREQDLSWKDFLSHADHLPRPNNYSPVYQPIDAVTN 360

Query: 361 ILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFL 420
           ILFSSGTTG+PKAIPWTQ+SPIR +A+AW  I+++VGDV+CWPTNLGWVMGP IL++SFL
Sbjct: 361 ILFSSGTTGDPKAIPWTQVSPIRSSADAWAQINIQVGDVFCWPTNLGWVMGPTILYASFL 420

Query: 421 SGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTG 480
           +GAALALYHGSPL+R FGKFVQD+GV+VLGTVPSLVK WKNT C++GLDWTKI+SFASTG
Sbjct: 421 TGAALALYHGSPLDRGFGKFVQDAGVTVLGTVPSLVKTWKNTGCMEGLDWTKIKSFASTG 480

Query: 481 ETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILD 540
           ETSNVDDDLWL+S+AYYKPIIECCGGTELASSYIQGS+LQPQAFG FSTA MTTGFVILD
Sbjct: 481 ETSNVDDDLWLSSRAYYKPIIECCGGTELASSYIQGSVLQPQAFGTFSTAAMTTGFVILD 540

Query: 541 ELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRT 600
           E GVPYPDDQPCVGEVGLFPL +GATD LLNADHEEVYF GMP+YKGMHLRRHGDIIKRT
Sbjct: 541 ENGVPYPDDQPCVGEVGLFPLIMGATDWLLNADHEEVYFKGMPMYKGMHLRRHGDIIKRT 600

Query: 601 VGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICV 660
           VGGY +VQGRADDTMNLGGIKTSSVEIERVCD ADES+LE+AAIS +P  GGPE+LV+ V
Sbjct: 601 VGGYFVVQGRADDTMNLGGIKTSSVEIERVCDKADESVLESAAISTAPLNGGPELLVVFV 660

Query: 661 VLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKH 720
           VLKKG+  +P ++LKM FSKAIQRNLNPLFKV+ VKIV EFPRTASNK+LRRVL+DQ+KH
Sbjct: 661 VLKKGYDCEP-NELKMKFSKAIQRNLNPLFKVNFVKIVPEFPRTASNKILRRVLRDQIKH 719

Query: 721 ELSVRSRI 728
           ELSVRSRI
Sbjct: 720 ELSVRSRI 727

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|380042388|gb|AFD33358.1| acyl-activating enzyme 14 [Cannabis sativa] Back     alignment and taxonomy information
>gi|380042368|gb|AFD33348.1| acyl-activating enzyme 4, partial [Cannabis sativa] Back     alignment and taxonomy information
>gi|380042386|gb|AFD33357.1| acyl-activating enzyme 13 [Cannabis sativa] Back     alignment and taxonomy information
>gi|297746452|emb|CBI16508.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449503441|ref|XP_004162004.1| PREDICTED: probable acyl-activating enzyme 18, peroxisomal-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449448834|ref|XP_004142170.1| PREDICTED: probable acyl-activating enzyme 18, peroxisomal-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449503439|ref|XP_004162003.1| PREDICTED: probable acyl-activating enzyme 18, peroxisomal-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449448832|ref|XP_004142169.1| PREDICTED: probable acyl-activating enzyme 18, peroxisomal-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|145336784|ref|NP_175929.3| acyl-activating enzyme 18 [Arabidopsis thaliana] gi|75297963|sp|Q84P17.1|AEE18_ARATH RecName: Full=Probable acyl-activating enzyme 18, peroxisomal gi|29893268|gb|AAP03028.1| acyl-activating enzyme 18 [Arabidopsis thaliana] gi|332195104|gb|AEE33225.1| acyl-activating enzyme 18 [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query728
TAIR|locus:2035721727 AAE18 "acyl-activating enzyme 0.965 0.966 0.710 2.8e-279
TAIR|locus:2178277721 AAE17 "acyl-activating enzyme 0.929 0.938 0.514 2.2e-185
TIGR_CMR|BA_2553646 BA_2553 "acetoacetyl-CoA synth 0.811 0.914 0.278 3.7e-48
DICTYBASE|DDB_G0277815674 acsA "acetyl-CoA synthetase" [ 0.813 0.878 0.259 4.6e-39
UNIPROTKB|P27550652 acs [Escherichia coli K-12 (ta 0.714 0.797 0.270 1.8e-36
TIGR_CMR|SO_2743650 SO_2743 "acetyl-coenzyme A syn 0.787 0.881 0.242 4.4e-35
UNIPROTKB|Q9KV59649 acsA "Acetyl-coenzyme A synthe 0.788 0.884 0.251 1.3e-34
TIGR_CMR|VC_0298649 VC_0298 "acetyl-CoA synthase" 0.788 0.884 0.251 1.3e-34
TIGR_CMR|CPS_3955648 CPS_3955 "acetyl-CoA synthetas 0.789 0.887 0.247 2.7e-34
MGI|MGI:1915988682 Acss1 "acyl-CoA synthetase sho 0.780 0.832 0.259 5.1e-32
TAIR|locus:2035721 AAE18 "acyl-activating enzyme 18" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 2684 (949.9 bits), Expect = 2.8e-279, P = 2.8e-279
 Identities = 503/708 (71%), Positives = 586/708 (82%)

Query:    23 AEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHPHGLHQLLYYSVYNDWDASINGP 82
             A++FD ++  +I  +   DP++ WK LV   V KPWHPH LHQLLYYSVY++WD+S++GP
Sbjct:    23 AKEFDKLVSDVITKAIETDPRDQWKALVDESVLKPWHPHPLHQLLYYSVYSNWDSSVHGP 82

Query:    83 PLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTSFSLFQKFTVEHPEAYWEIVLKE 142
             PLYWFPSL QSK TNLG  ME HGP+ LG  YK+P  SF LF++F+VEHPE YW  V+ E
Sbjct:    83 PLYWFPSLSQSKSTNLGKLMEYHGPRLLGPSYKNPLESFELFRRFSVEHPEVYWSFVIDE 142

Query:   143 ISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRC 202
             +S+ FH  P+CIL+   KSK  GTWLP +VLN+AECCL+PSS  +KEDDSVAVVWR +  
Sbjct:   143 LSLVFHTPPRCILN---KSKPEGTWLPDAVLNIAECCLMPSSHPKKEDDSVAVVWRNEGF 199

Query:   203 DDSSVNRMTYKELRERVMLVANALDTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVS 262
             DDS VNRMT KELRE+VMLVANA+   F KGD IAIDMPMTV AVIIYLAIILAG +VVS
Sbjct:   200 DDSPVNRMTIKELREQVMLVANAISGSFEKGDTIAIDMPMTVDAVIIYLAIILAGCIVVS 259

Query:   263 IADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVG 322
             IADSFAA+EIATRL++SKAKGIFTQD+ILRGGR+FPLYS+V EA P K +VLP  G ++ 
Sbjct:   260 IADSFAAKEIATRLKISKAKGIFTQDYILRGGRRFPLYSRVVEAAPSKVIVLPASGTELH 319

Query:   323 IQLRQQDVSWKDFLSCVDYHP-GPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSP 381
             +QLR+QDVSW DFLS    H  G  YY P+Y PV+SVINILFSSGTTGEPKAIPWTQLSP
Sbjct:   320 VQLREQDVSWMDFLSNAKPHSSGENYYRPIYLPVESVINILFSSGTTGEPKAIPWTQLSP 379

Query:   382 IRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFV 441
             IR A + W H+D++VG  YCWPTNLGWVMGP ++FS FL+GA LALY GSPL R FGKFV
Sbjct:   380 IRSACDGWAHLDVQVGHTYCWPTNLGWVMGPTLMFSCFLTGATLALYSGSPLGRGFGKFV 439

Query:   442 QDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYKPII 501
             QD+GV+VLGTVPSLVK WK TNC++GL+WTKI+ FA+TGE SNVDD LWL+SKA YKP+I
Sbjct:   440 QDAGVTVLGTVPSLVKTWKRTNCMEGLNWTKIKFFATTGEASNVDDVLWLSSKADYKPVI 499

Query:   502 ECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPL 561
             ECCGGTELASSYI GS LQPQAFGAFST +MTT  +I DE GVPYPDDQPC GEVGLFP 
Sbjct:   500 ECCGGTELASSYIIGSPLQPQAFGAFSTPSMTTRIIIFDENGVPYPDDQPCTGEVGLFPQ 559

Query:   562 YLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIK 621
             +LGATDRLLNA+H+EVYF GMP+YK   LRRHGDI+KRTVGGY  VQGRADDTMNLGGIK
Sbjct:   560 HLGATDRLLNANHDEVYFKGMPMYKETRLRRHGDIVKRTVGGYYNVQGRADDTMNLGGIK 619

Query:   622 TSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKA 681
             TSS+EIERVCD ADE I ETAA++++P  GGPE+LVI  VLK+GF  Q  ++LKM FS+ 
Sbjct:   620 TSSIEIERVCDQADECISETAAVTLTPPNGGPELLVIFAVLKEGFKQQSGEELKMKFSRT 679

Query:   682 IQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHEL-SVRSRI 728
             IQ++LNPLFKVS VKIV EFPRTAS+KLLRRVL+DQ+K EL S+RSRI
Sbjct:   680 IQKDLNPLFKVSFVKIVPEFPRTASSKLLRRVLRDQIKQELLSLRSRI 727
GO:0003824 "catalytic activity" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0005739 "mitochondrion" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA;ISS
GO:0016874 "ligase activity" evidence=ISS
GO:0005777 "peroxisome" evidence=IDA
GO:0009850 "auxin metabolic process" evidence=IMP
TAIR|locus:2178277 AAE17 "acyl-activating enzyme 17" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TIGR_CMR|BA_2553 BA_2553 "acetoacetyl-CoA synthase, putative" [Bacillus anthracis str. Ames (taxid:198094)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0277815 acsA "acetyl-CoA synthetase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|P27550 acs [Escherichia coli K-12 (taxid:83333)] Back     alignment and assigned GO terms
TIGR_CMR|SO_2743 SO_2743 "acetyl-coenzyme A synthetase" [Shewanella oneidensis MR-1 (taxid:211586)] Back     alignment and assigned GO terms
UNIPROTKB|Q9KV59 acsA "Acetyl-coenzyme A synthetase" [Vibrio cholerae O1 biovar El Tor str. N16961 (taxid:243277)] Back     alignment and assigned GO terms
TIGR_CMR|VC_0298 VC_0298 "acetyl-CoA synthase" [Vibrio cholerae O1 biovar El Tor (taxid:686)] Back     alignment and assigned GO terms
TIGR_CMR|CPS_3955 CPS_3955 "acetyl-CoA synthetase" [Colwellia psychrerythraea 34H (taxid:167879)] Back     alignment and assigned GO terms
MGI|MGI:1915988 Acss1 "acyl-CoA synthetase short-chain family member 1" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q84P17AEE18_ARATH6, ., 2, ., 1, ., -0.70130.99580.9972yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer6.2.10.691
4th Layer6.2.1.16LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query728
PLN03052728 PLN03052, PLN03052, acetate--CoA ligase; Provision 0.0
PLN03051499 PLN03051, PLN03051, acyl-activating enzyme; Provis 0.0
COG0365528 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fat 1e-74
cd05968474 cd05968, AACS_like, Uncharacterized acyl-CoA synth 4e-64
cd05943616 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoac 1e-59
PRK03584655 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Pr 1e-52
COG0318534 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/ 6e-50
pfam00501412 pfam00501, AMP-binding, AMP-binding enzyme 5e-48
TIGR01217652 TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase 9e-45
TIGR02188625 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase 4e-43
cd05966602 cd05966, ACS, Acetyl-CoA synthetase (also known as 3e-39
cd05967607 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) 3e-36
cd04433338 cd04433, AFD_class_I, Adenylate forming domain, Cl 6e-33
TIGR02316628 TIGR02316, propion_prpE, propionate--CoA ligase 1e-29
PRK00174637 PRK00174, PRK00174, acetyl-CoA synthetase; Provisi 5e-29
PLN02654666 PLN02654, PLN02654, acetate-CoA ligase 4e-22
cd05936468 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain 8e-22
PRK07656513 PRK07656, PRK07656, long-chain-fatty-acid--CoA lig 2e-20
cd05920483 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP l 5e-20
cd05911487 cd05911, Firefly_Luc_like, Firefly luciferase of l 6e-20
PRK06187521 PRK06187, PRK06187, long-chain-fatty-acid--CoA lig 2e-18
PRK10524629 PRK10524, prpE, propionyl-CoA synthetase; Provisio 1e-17
cd05903437 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA li 2e-17
PRK04319570 PRK04319, PRK04319, acetyl-CoA synthetase; Provisi 2e-17
cd05909489 cd05909, AAS_C, C-terminal domain of the acyl-acyl 3e-17
PRK07638487 PRK07638, PRK07638, acyl-CoA synthetase; Validated 7e-16
PRK08316523 PRK08316, PRK08316, acyl-CoA synthetase; Validated 1e-15
TIGR01733409 TIGR01733, AA-adenyl-dom, amino acid adenylation d 1e-15
cd05904504 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) 1e-14
cd05969443 cd05969, MACS_like_4, Uncharacterized subfamily of 2e-14
cd05973440 cd05973, MACS_like_2, Uncharacterized subfamily of 2e-14
cd05919436 cd05919, BCL_like, Benzoate CoA ligase (BCL) and s 4e-14
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 6e-14
cd12118520 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synt 2e-13
cd05958487 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) 2e-13
cd12117474 cd12117, A_NRPS_Srf_like, The adenylation domain o 2e-13
COG1022613 COG1022, FAA1, Long-chain acyl-CoA synthetases (AM 2e-13
cd05926345 cd05926, FACL_fum10p_like, Subfamily of fatty acid 7e-13
cd05959506 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 8e-13
cd05972430 cd05972, MACS_like, Medium-chain acyl-CoA syntheta 3e-12
cd05918447 cd05918, A_NRPS_SidN3_like, The adenylation (A) do 3e-12
cd05928530 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-Co 7e-12
cd05971439 cd05971, MACS_like_3, Uncharacterized subfamily of 3e-11
PRK13295547 PRK13295, PRK13295, cyclohexanecarboxylate-CoA lig 3e-11
cd05917347 cd05917, FACL_like_2, Uncharacterized subfamily of 4e-11
cd05974433 cd05974, MACS_like_1, Uncharacterized subfamily of 7e-11
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 1e-10
cd05922350 cd05922, FACL_like_6, Uncharacterized subfamily of 1e-10
PTZ00237647 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisi 1e-10
cd12119517 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synth 1e-10
cd05923495 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) 4e-10
cd05970537 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA s 7e-10
PRK06087547 PRK06087, PRK06087, short chain acyl-CoA synthetas 2e-09
cd05929342 cd05929, BACL_like, Bacterial Bile acid CoA ligase 3e-09
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 4e-09
PRK09088488 PRK09088, PRK09088, acyl-CoA synthetase; Validated 5e-09
PRK05852534 PRK05852, PRK05852, acyl-CoA synthetase; Validated 9e-09
TIGR03098517 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-form 1e-08
PRK08276502 PRK08276, PRK08276, long-chain-fatty-acid--CoA lig 2e-08
TIGR02262508 TIGR02262, benz_CoA_lig, benzoate-CoA ligase famil 2e-08
COG1021542 COG1021, EntE, Peptide arylation enzymes [Secondar 2e-08
cd12114476 cd12114, A_NRPS_TlmIV_like, The adenylation domain 2e-08
PLN02574560 PLN02574, PLN02574, 4-coumarate--CoA ligase-like 3e-08
COG1020642 COG1020, EntF, Non-ribosomal peptide synthetase mo 3e-08
cd05945447 cd05945, DltA, D-alanine:D-alanyl carrier protein 1e-07
PRK06710563 PRK06710, PRK06710, long-chain-fatty-acid--CoA lig 1e-07
PRK07529632 PRK07529, PRK07529, AMP-binding domain protein; Va 2e-07
PRK07867529 PRK07867, PRK07867, acyl-CoA synthetase; Validated 2e-07
cd05907456 cd05907, VL_LC_FACS_like, Long-chain fatty acid Co 3e-07
cd05930445 cd05930, A_NRPS, The adenylation domain of nonribo 1e-06
cd05906560 cd05906, A_NRPS_TubE_like, The adenylation domain 1e-06
TIGR03208538 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate 3e-06
PRK07788549 PRK07788, PRK07788, acyl-CoA synthetase; Validated 3e-06
PRK07798533 PRK07798, PRK07798, acyl-CoA synthetase; Validated 3e-06
cd05941430 cd05941, MCS, Malonyl-CoA synthetase (MCS) 4e-06
PRK07786542 PRK07786, PRK07786, long-chain-fatty-acid--CoA lig 4e-06
PRK08314546 PRK08314, PRK08314, long-chain-fatty-acid--CoA lig 4e-06
PRK12583558 PRK12583, PRK12583, acyl-CoA synthetase; Provision 4e-06
PRK06155542 PRK06155, PRK06155, crotonobetaine/carnitine-CoA l 5e-06
PLN02246537 PLN02246, PLN02246, 4-coumarate--CoA ligase 1e-05
PRK06839496 PRK06839, PRK06839, acyl-CoA synthetase; Validated 1e-05
PRK07059557 PRK07059, PRK07059, Long-chain-fatty-acid--CoA lig 1e-05
TIGR02275526 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP 3e-05
cd05930445 cd05930, A_NRPS, The adenylation domain of nonribo 4e-05
cd05941430 cd05941, MCS, Malonyl-CoA synthetase (MCS) 5e-05
cd05931547 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) 5e-05
cd05972430 cd05972, MACS_like, Medium-chain acyl-CoA syntheta 6e-05
PRK13388540 PRK13388, PRK13388, acyl-CoA synthetase; Provision 6e-05
cd12115449 cd12115, A_NRPS_Sfm_like, The adenylation domain o 7e-05
cd05932504 cd05932, LC_FACS_bac, Bacterial long-chain fatty a 7e-05
PRK08180614 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewe 8e-05
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 1e-04
PRK06178567 PRK06178, PRK06178, acyl-CoA synthetase; Validated 1e-04
PRK10252 1296 PRK10252, entF, enterobactin synthase subunit F; P 1e-04
PRK08008517 PRK08008, caiC, putative crotonobetaine/carnitine- 1e-04
cd05935430 cd05935, LC_FACS_like, Putative long-chain fatty a 2e-04
PRK10946536 PRK10946, entE, enterobactin synthase subunit E; P 2e-04
PRK06334539 PRK06334, PRK06334, long chain fatty acid--[acyl-c 2e-04
PRK086331146 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanola 2e-04
PRK03640483 PRK03640, PRK03640, O-succinylbenzoic acid--CoA li 2e-04
cd05915509 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetase 3e-04
TIGR01923436 TIGR01923, menE, O-succinylbenzoate-CoA ligase 3e-04
PLN02430660 PLN02430, PLN02430, long-chain-fatty-acid-CoA liga 3e-04
PLN02330546 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 3e-04
PRK06060 705 PRK06060, PRK06060, acyl-CoA synthetase; Validated 4e-04
PRK06145497 PRK06145, PRK06145, acyl-CoA synthetase; Validated 4e-04
cd05934421 cd05934, FACL_DitJ_like, Uncharacterized subfamily 0.001
cd05971439 cd05971, MACS_like_3, Uncharacterized subfamily of 0.001
PRK12467 3956 PRK12467, PRK12467, peptide synthase; Provisional 0.001
PRK12316 5163 PRK12316, PRK12316, peptide synthase; Provisional 0.001
PRK05857540 PRK05857, PRK05857, acyl-CoA synthetase; Validated 0.001
PRK07514504 PRK07514, PRK07514, malonyl-CoA synthase; Validate 0.001
PRK123165163 PRK12316, PRK12316, peptide synthase; Provisional 0.002
PRK04813503 PRK04813, PRK04813, D-alanine--poly(phosphoribitol 0.002
cd05908499 cd05908, A_NRPS_MycA_like, The adenylation domain 0.002
PRK08974560 PRK08974, PRK08974, long-chain-fatty-acid--CoA lig 0.002
PRK07867529 PRK07867, PRK07867, acyl-CoA synthetase; Validated 0.003
cd05935430 cd05935, LC_FACS_like, Putative long-chain fatty a 0.003
PRK12406509 PRK12406, PRK12406, long-chain-fatty-acid--CoA lig 0.003
PRK08315559 PRK08315, PRK08315, AMP-binding domain protein; Va 0.003
PLN03102579 PLN03102, PLN03102, acyl-activating enzyme; Provis 0.003
PLN02574560 PLN02574, PLN02574, 4-coumarate--CoA ligase-like 0.004
PRK08751560 PRK08751, PRK08751, putative long-chain fatty acyl 0.004
>gnl|CDD|215553 PLN03052, PLN03052, acetate--CoA ligase; Provisional Back     alignment and domain information 
 Score = 1251 bits (3240), Expect = 0.0
 Identities = 446/730 (61%), Positives = 543/730 (74%), Gaps = 7/730 (0%)

Query: 1   MGKNIREVGVVDLVKVGLKVDEAEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHP 60
            GK++ E+ V DL   GL  +EAE F   L+ ++  + G  P  IW+  +++ +  P HP
Sbjct: 4   AGKSVDEITVGDLEAAGLSPEEAEKFFKELQVILTRA-GASPPSIWRR-ISQSLLTPSHP 61

Query: 61  HGLHQLLYYSVYNDWDASINGPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTS 120
             LHQL+YYS Y +WD+   GPP  WFPS + +KLTNLG  +E  G + LG+ YKDP +S
Sbjct: 62  FALHQLMYYSCYKNWDSDTLGPPPAWFPSPEIAKLTNLGRLLEARGKELLGSKYKDPISS 121

Query: 121 FSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDKSKHGGTWLPGSVLNVAECCL 180
           FS FQ+F+VE+PE YW IVL E+S+ F   P+CILD +D+S  GG WLPG+VLNVAECCL
Sbjct: 122 FSEFQRFSVENPEVYWSIVLDELSLVFSVPPRCILDTSDESNPGGQWLPGAVLNVAECCL 181

Query: 181 LPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTM-FSKGDAIAID 239
            P     K DDS+A++WR++  DD  VNRMT  ELR +V  VANALD + F KGDAIAID
Sbjct: 182 TPKPS--KTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAID 239

Query: 240 MPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPL 299
           MPM VHAVIIYLAIILAG VVVSIADSFA  EIATRL++SKAK IFTQD I+RGG+  PL
Sbjct: 240 MPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPL 299

Query: 300 YSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVI 359
           YS+V EA   KA+VLP  G  V ++LR+ D+SW DFL+  +    P  Y  V +PV++  
Sbjct: 300 YSRVVEAKAPKAIVLPADGKSVRVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFT 359

Query: 360 NILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDVYCWPTNLGWVMGPIILFSSF 419
           NILFSSGTTGEPKAIPWTQL+P+R AA+AW H+D++ GD+ CWPTNLGW+MGP ++++S 
Sbjct: 360 NILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIVCWPTNLGWMMGPWLVYASL 419

Query: 420 LSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFAST 479
           L+GA LALY+GSPL R F KFVQD+ V++LGTVPS+VK WKNTNC+ GLDW+ IR F ST
Sbjct: 420 LNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGST 479

Query: 480 GETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVIL 539
           GE S+VDD LWL S+A YKPIIE CGGTEL   ++ GS+LQPQAF AFST  M     IL
Sbjct: 480 GEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFIL 539

Query: 540 DELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKR 599
           D+ G PYPDD PC GE+ LFPL  GA+  LLNADH +VYF GMP++ G  LRRHGDI +R
Sbjct: 540 DDSGNPYPDDAPCTGELALFPLMFGASSTLLNADHYKVYFKGMPVFNGKILRRHGDIFER 599

Query: 600 TVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEVLVIC 659
           T GGY    GRADDTMNLGGIK SSVEIERVC+ ADES+LETAAI V P GGGPE LVI 
Sbjct: 600 TSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADESVLETAAIGVPPPGGGPEQLVIA 659

Query: 660 VVLKKGFTSQP-VDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQL 718
            VLK    S P +++LK IF+ AIQ+ LNPLFKVS V IV  FPRTASNK++RRVL+ QL
Sbjct: 660 AVLKDPPGSNPDLNELKKIFNSAIQKKLNPLFKVSAVVIVPSFPRTASNKVMRRVLRQQL 719

Query: 719 KHELSVRSRI 728
             ELS RS++
Sbjct: 720 AQELS-RSKL 728

Length = 728
>gnl|CDD|215552 PLN03051, PLN03051, acyl-activating enzyme; Provisional Back     alignment and domain information
>gnl|CDD|223442 COG0365, Acs, Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|213315 cd05968, AACS_like, Uncharacterized acyl-CoA synthetase subfamily similar to Acetoacetyl-CoA synthetase Back     alignment and domain information
>gnl|CDD|213308 cd05943, AACS, Acetoacetyl-CoA synthetase (acetoacetate-CoA ligase, AACS) Back     alignment and domain information
>gnl|CDD|235134 PRK03584, PRK03584, acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|223395 COG0318, CaiC, Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|215954 pfam00501, AMP-binding, AMP-binding enzyme Back     alignment and domain information
>gnl|CDD|233316 TIGR01217, ac_ac_CoA_syn, acetoacetyl-CoA synthase Back     alignment and domain information
>gnl|CDD|233770 TIGR02188, Ac_CoA_lig_AcsA, acetate--CoA ligase Back     alignment and domain information
>gnl|CDD|213313 cd05966, ACS, Acetyl-CoA synthetase (also known as acetate-CoA ligase and acetyl-activating enzyme) Back     alignment and domain information
>gnl|CDD|213314 cd05967, PrpE, Propionyl-CoA synthetase (PrpE) Back     alignment and domain information
>gnl|CDD|213270 cd04433, AFD_class_I, Adenylate forming domain, Class I Back     alignment and domain information
>gnl|CDD|131369 TIGR02316, propion_prpE, propionate--CoA ligase Back     alignment and domain information
>gnl|CDD|234677 PRK00174, PRK00174, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|215353 PLN02654, PLN02654, acetate-CoA ligase Back     alignment and domain information
>gnl|CDD|213302 cd05936, FC-FACS_FadD_like, Prokaryotic long-chain fatty acid CoA synthetases similar to Escherichia coli FadD Back     alignment and domain information
>gnl|CDD|236072 PRK07656, PRK07656, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213287 cd05920, 23DHB-AMP_lg, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|213279 cd05911, Firefly_Luc_like, Firefly luciferase of light emitting insects and 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|235730 PRK06187, PRK06187, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|182517 PRK10524, prpE, propionyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213271 cd05903, CHC_CoA_lg, Cyclohexanecarboxylate-CoA ligase (also called cyclohex-1-ene-1-carboxylate:CoA ligase) Back     alignment and domain information
>gnl|CDD|235279 PRK04319, PRK04319, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213277 cd05909, AAS_C, C-terminal domain of the acyl-acyl carrier protein synthetase (also called 2-acylglycerophosphoethanolamine acyltransferase, Aas) Back     alignment and domain information
>gnl|CDD|236071 PRK07638, PRK07638, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|181381 PRK08316, PRK08316, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|233550 TIGR01733, AA-adenyl-dom, amino acid adenylation domain Back     alignment and domain information
>gnl|CDD|213272 cd05904, 4CL, 4-Coumarate-CoA Ligase (4CL) Back     alignment and domain information
>gnl|CDD|213316 cd05969, MACS_like_4, Uncharacterized subfamily of Acetyl-CoA synthetase like family (ACS) Back     alignment and domain information
>gnl|CDD|213320 cd05973, MACS_like_2, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|213286 cd05919, BCL_like, Benzoate CoA ligase (BCL) and similar adenylate forming enzymes Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213326 cd12118, ttLC_FACS_AEE21_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles and Arabidopsis Back     alignment and domain information
>gnl|CDD|213311 cd05958, ABCL, 2-aminobenzoate-CoA ligase (ABCL) Back     alignment and domain information
>gnl|CDD|213325 cd12117, A_NRPS_Srf_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Bacillus subtilis termination module Surfactin (SrfA-C) Back     alignment and domain information
>gnl|CDD|223953 COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|213292 cd05926, FACL_fum10p_like, Subfamily of fatty acid CoA ligase (FACL) similar to Fum10p of Gibberella moniliformis Back     alignment and domain information
>gnl|CDD|213312 cd05959, BCL_4HBCL, Benzoate CoA ligase (BCL) and 4-Hydroxybenzoate-Coenzyme A Ligase (4-HBA-CoA ligase) Back     alignment and domain information
>gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|213285 cd05918, A_NRPS_SidN3_like, The adenylation (A) domain of siderophore-synthesizing nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|213294 cd05928, MACS_euk, Eukaryotic Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|213318 cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|171961 PRK13295, PRK13295, cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>gnl|CDD|213284 cd05917, FACL_like_2, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213321 cd05974, MACS_like_1, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|213289 cd05922, FACL_like_6, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|240325 PTZ00237, PTZ00237, acetyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213327 cd12119, ttLC_FACS_AlkK_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|213290 cd05923, CBAL, 4-Chlorobenzoate-CoA ligase (CBAL) Back     alignment and domain information
>gnl|CDD|213317 cd05970, MACS_AAE_MA_like, Medium-chain acyl-CoA synthetase (MACS) of AAE_MA like Back     alignment and domain information
>gnl|CDD|180393 PRK06087, PRK06087, short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>gnl|CDD|213295 cd05929, BACL_like, Bacterial Bile acid CoA ligases and similar proteins Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|181644 PRK09088, PRK09088, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235625 PRK05852, PRK05852, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|211788 TIGR03098, ligase_PEP_1, acyl-CoA ligase (AMP-forming), exosortase A-associated Back     alignment and domain information
>gnl|CDD|236215 PRK08276, PRK08276, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|233803 TIGR02262, benz_CoA_lig, benzoate-CoA ligase family Back     alignment and domain information
>gnl|CDD|223952 COG1021, EntE, Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|213322 cd12114, A_NRPS_TlmIV_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Streptoalloteichus tallysomycin biosynthesis genes Back     alignment and domain information
>gnl|CDD|215312 PLN02574, PLN02574, 4-coumarate--CoA ligase-like Back     alignment and domain information
>gnl|CDD|223951 COG1020, EntF, Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|213310 cd05945, DltA, D-alanine:D-alanyl carrier protein ligase (DltA) Back     alignment and domain information
>gnl|CDD|180666 PRK06710, PRK06710, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|236043 PRK07529, PRK07529, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|236120 PRK07867, PRK07867, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213275 cd05907, VL_LC_FACS_like, Long-chain fatty acid CoA synthetases and Bubblegum-like very long-chain fatty acid CoA synthetases Back     alignment and domain information
>gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|213274 cd05906, A_NRPS_TubE_like, The adenylation domain (A domain) of a family of nonribosomal peptide synthetases (NRPSs) synthesizing toxins and antitumor agents Back     alignment and domain information
>gnl|CDD|132252 TIGR03208, cyc_hxne_CoA_lg, cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>gnl|CDD|236097 PRK07788, PRK07788, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236100 PRK07798, PRK07798, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) Back     alignment and domain information
>gnl|CDD|169098 PRK07786, PRK07786, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|236235 PRK08314, PRK08314, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|237145 PRK12583, PRK12583, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|235719 PRK06155, PRK06155, crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|215137 PLN02246, PLN02246, 4-coumarate--CoA ligase Back     alignment and domain information
>gnl|CDD|168698 PRK06839, PRK06839, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|235923 PRK07059, PRK07059, Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|233807 TIGR02275, DHB_AMP_lig, 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>gnl|CDD|213296 cd05930, A_NRPS, The adenylation domain of nonribosomal peptide synthetases (NRPS) Back     alignment and domain information
>gnl|CDD|213307 cd05941, MCS, Malonyl-CoA synthetase (MCS) Back     alignment and domain information
>gnl|CDD|213297 cd05931, FAAL, Fatty acyl-AMP ligase (FAAL) Back     alignment and domain information
>gnl|CDD|213319 cd05972, MACS_like, Medium-chain acyl-CoA synthetase (MACS or ACSM) Back     alignment and domain information
>gnl|CDD|237374 PRK13388, PRK13388, acyl-CoA synthetase; Provisional Back     alignment and domain information
>gnl|CDD|213323 cd12115, A_NRPS_Sfm_like, The adenylation domain of nonribosomal peptide synthetases (NRPS), including Saframycin A gene cluster from Streptomyces lavendulae Back     alignment and domain information
>gnl|CDD|213298 cd05932, LC_FACS_bac, Bacterial long-chain fatty acid CoA synthetase (LC-FACS), including Marinobacter hydrocarbonoclasticus isoprenoid Coenzyme A synthetase Back     alignment and domain information
>gnl|CDD|236175 PRK08180, PRK08180, feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|235724 PRK06178, PRK06178, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|236668 PRK10252, entF, enterobactin synthase subunit F; Provisional Back     alignment and domain information
>gnl|CDD|181195 PRK08008, caiC, putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase Back     alignment and domain information
>gnl|CDD|236803 PRK10946, entE, enterobactin synthase subunit E; Provisional Back     alignment and domain information
>gnl|CDD|180533 PRK06334, PRK06334, long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>gnl|CDD|236315 PRK08633, PRK08633, 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>gnl|CDD|235146 PRK03640, PRK03640, O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|213283 cd05915, ttLC_FACS_like, Fatty acyl-CoA synthetases similar to LC-FACS from Thermus thermophiles Back     alignment and domain information
>gnl|CDD|162605 TIGR01923, menE, O-succinylbenzoate-CoA ligase Back     alignment and domain information
>gnl|CDD|178049 PLN02430, PLN02430, long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>gnl|CDD|215189 PLN02330, PLN02330, 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>gnl|CDD|180374 PRK06060, PRK06060, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|102207 PRK06145, PRK06145, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213300 cd05934, FACL_DitJ_like, Uncharacterized subfamily of fatty acid CoA ligase (FACL) Back     alignment and domain information
>gnl|CDD|213318 cd05971, MACS_like_3, Uncharacterized subfamily of medium-chain acyl-CoA synthetase (MACS) Back     alignment and domain information
>gnl|CDD|237108 PRK12467, PRK12467, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|180293 PRK05857, PRK05857, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|181011 PRK07514, PRK07514, malonyl-CoA synthase; Validated Back     alignment and domain information
>gnl|CDD|237054 PRK12316, PRK12316, peptide synthase; Provisional Back     alignment and domain information
>gnl|CDD|235313 PRK04813, PRK04813, D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>gnl|CDD|213276 cd05908, A_NRPS_MycA_like, The adenylation domain of nonribosomal peptide synthetases (NRPS) similar to mycosubtilin synthase subunit A (MycA) Back     alignment and domain information
>gnl|CDD|236359 PRK08974, PRK08974, long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>gnl|CDD|236120 PRK07867, PRK07867, acyl-CoA synthetase; Validated Back     alignment and domain information
>gnl|CDD|213301 cd05935, LC_FACS_like, Putative long-chain fatty acid CoA ligase Back     alignment and domain information
>gnl|CDD|183506 PRK12406, PRK12406, long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>gnl|CDD|236236 PRK08315, PRK08315, AMP-binding domain protein; Validated Back     alignment and domain information
>gnl|CDD|215576 PLN03102, PLN03102, acyl-activating enzyme; Provisional Back     alignment and domain information
>gnl|CDD|215312 PLN02574, PLN02574, 4-coumarate--CoA ligase-like Back     alignment and domain information
>gnl|CDD|181546 PRK08751, PRK08751, putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 728
PLN03052728 acetate--CoA ligase; Provisional 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
COG0365528 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid l 100.0
PRK12467 3956 peptide synthase; Provisional 100.0
PRK056914334 peptide synthase; Validated 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
PRK12316 5163 peptide synthase; Provisional 100.0
TIGR03443 1389 alpha_am_amid L-aminoadipate-semialdehyde dehydrog 100.0
PRK10252 1296 entF enterobactin synthase subunit F; Provisional 100.0
PTZ00237647 acetyl-CoA synthetase; Provisional 100.0
PRK05691 4334 peptide synthase; Validated 100.0
PLN02654666 acetate-CoA ligase 100.0
TIGR02316628 propion_prpE propionate--CoA ligase. This family c 100.0
TIGR02188625 Ac_CoA_lig_AcsA acetate--CoA ligase. This model de 100.0
PRK03584655 acetoacetyl-CoA synthetase; Provisional 100.0
TIGR01217652 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzym 100.0
PRK00174637 acetyl-CoA synthetase; Provisional 100.0
PRK10524629 prpE propionyl-CoA synthetase; Provisional 100.0
KOG1175626 consensus Acyl-CoA synthetase [Lipid transport and 100.0
KOG1176537 consensus Acyl-CoA synthetase [Lipid transport and 100.0
KOG1177596 consensus Long chain fatty acid acyl-CoA ligase [L 100.0
PLN03051499 acyl-activating enzyme; Provisional 100.0
COG0318534 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid l 100.0
PRK07788549 acyl-CoA synthetase; Validated 100.0
PRK04319570 acetyl-CoA synthetase; Provisional 100.0
PRK06060 705 acyl-CoA synthetase; Validated 100.0
PRK06334539 long chain fatty acid--[acyl-carrier-protein] liga 100.0
PRK07529632 AMP-binding domain protein; Validated 100.0
PLN02860563 o-succinylbenzoate-CoA ligase 100.0
COG1021542 EntE Peptide arylation enzymes [Secondary metaboli 100.0
PRK13295547 cyclohexanecarboxylate-CoA ligase; Reviewed 100.0
PLN02574560 4-coumarate--CoA ligase-like 100.0
PRK13382537 acyl-CoA synthetase; Provisional 100.0
PRK05677562 long-chain-fatty-acid--CoA ligase; Validated 100.0
PLN02246537 4-coumarate--CoA ligase 100.0
PLN02736651 long-chain acyl-CoA synthetase 100.0
PRK09274552 peptide synthase; Provisional 100.0
PRK08314546 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK05857540 acyl-CoA synthetase; Validated 100.0
PRK07656513 long-chain-fatty-acid--CoA ligase; Validated 100.0
PLN02614666 long-chain acyl-CoA synthetase 100.0
PRK07638487 acyl-CoA synthetase; Validated 100.0
PRK06839496 acyl-CoA synthetase; Validated 100.0
PRK08315559 AMP-binding domain protein; Validated 100.0
PRK07769631 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK12583558 acyl-CoA synthetase; Provisional 100.0
TIGR03098515 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosor 100.0
PRK05851525 long-chain-fatty-acid--[acyl-carrier-protein] liga 100.0
PRK08279600 long-chain-acyl-CoA synthetase; Validated 100.0
PLN02330546 4-coumarate--CoA ligase-like 1 100.0
PRK05852534 acyl-CoA synthetase; Validated 100.0
TIGR01734502 D-ala-DACP-lig D-alanine--poly(phosphoribitol) lig 100.0
PRK05605573 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK03640483 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK07008539 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06145497 acyl-CoA synthetase; Validated 100.0
TIGR03208538 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. 100.0
PRK07470528 acyl-CoA synthetase; Validated 100.0
PRK06187521 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK07868994 acyl-CoA synthetase; Validated 100.0
PRK12476612 putative fatty-acid--CoA ligase; Provisional 100.0
PLN03102579 acyl-activating enzyme; Provisional 100.0
PRK08316523 acyl-CoA synthetase; Validated 100.0
TIGR02275527 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Prot 100.0
PRK06155542 crotonobetaine/carnitine-CoA ligase; Provisional 100.0
PRK08043718 bifunctional acyl-[acyl carrier protein] synthetas 100.0
PRK07514504 malonyl-CoA synthase; Validated 100.0
PRK09088488 acyl-CoA synthetase; Validated 100.0
PLN02861660 long-chain-fatty-acid-CoA ligase 100.0
PRK05620576 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK10946536 entE enterobactin synthase subunit E; Provisional 100.0
PRK06087547 short chain acyl-CoA synthetase; Reviewed 100.0
PRK13390501 acyl-CoA synthetase; Provisional 100.0
PRK07786542 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK12492562 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK08008517 caiC putative crotonobetaine/carnitine-CoA ligase; 100.0
PRK06018542 putative acyl-CoA synthetase; Provisional 100.0
PRK13388540 acyl-CoA synthetase; Provisional 100.0
PRK04813503 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
PRK07798533 acyl-CoA synthetase; Validated 100.0
PRK086331146 2-acyl-glycerophospho-ethanolamine acyltransferase 100.0
PRK07787471 acyl-CoA synthetase; Validated 100.0
PRK07867529 acyl-CoA synthetase; Validated 100.0
TIGR02262508 benz_CoA_lig benzoate-CoA ligase family. Character 100.0
PRK06188524 acyl-CoA synthetase; Validated 100.0
PRK08751560 putative long-chain fatty acyl CoA ligase; Provisi 100.0
PLN02479567 acetate-CoA ligase 100.0
PRK07059557 Long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK06164540 acyl-CoA synthetase; Validated 100.0
PRK06710563 long-chain-fatty-acid--CoA ligase; Validated 100.0
TIGR03205541 pimA dicarboxylate--CoA ligase PimA. PimA, a membe 100.0
PRK07445452 O-succinylbenzoic acid--CoA ligase; Reviewed 100.0
PRK13383516 acyl-CoA synthetase; Provisional 100.0
PTZ00216700 acyl-CoA synthetase; Provisional 100.0
PRK06178567 acyl-CoA synthetase; Validated 100.0
PTZ00342746 acyl-CoA synthetase; Provisional 100.0
PLN02387696 long-chain-fatty-acid-CoA ligase family protein 100.0
PRK08974560 long-chain-fatty-acid--CoA ligase; Validated 100.0
PRK13391511 acyl-CoA synthetase; Provisional 100.0
PRK12406509 long-chain-fatty-acid--CoA ligase; Provisional 100.0
PRK09029458 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PRK08180614 feruloyl-CoA synthase; Reviewed 100.0
PRK08276502 long-chain-fatty-acid--CoA ligase; Validated 100.0
COG1020642 EntF Non-ribosomal peptide synthetase modules and 100.0
PRK08308414 acyl-CoA synthetase; Validated 100.0
PRK08162545 acyl-CoA synthetase; Validated 100.0
PLN02430660 long-chain-fatty-acid-CoA ligase 100.0
PRK068141140 acylglycerophosphoethanolamine acyltransferase; Pr 100.0
PRK12582624 acyl-CoA synthetase; Provisional 100.0
PRK09192579 acyl-CoA synthetase; Validated 100.0
TIGR01923436 menE O-succinylbenzoate-CoA ligase. This model rep 100.0
PRK05850578 acyl-CoA synthetase; Validated 100.0
PRK07768545 long-chain-fatty-acid--CoA ligase; Validated 100.0
COG1022613 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) 100.0
KOG1256691 consensus Long-chain acyl-CoA synthetases (AMP-for 100.0
KOG1179649 consensus Very long-chain acyl-CoA synthetase/fatt 100.0
PF00501417 AMP-binding: AMP-binding enzyme; InterPro: IPR0008 100.0
TIGR01733408 AA-adenyl-dom amino acid adenylation domain. This 100.0
KOG1180678 consensus Acyl-CoA synthetase [Lipid transport and 100.0
PRK07824358 O-succinylbenzoic acid--CoA ligase; Provisional 100.0
PTZ00297 1452 pantothenate kinase; Provisional 100.0
TIGR02372386 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactiv 100.0
KOG1178 1032 consensus Non-ribosomal peptide synthetase/alpha-a 100.0
TIGR02155422 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacet 100.0
TIGR03335445 F390_ftsA coenzyme F390 synthetase. This enzyme, c 99.97
KOG36281363 consensus Predicted AMP-binding protein [General f 99.96
TIGR03089227 conserved hypothetical protein TIGR03089. This pro 99.93
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 99.91
PRK09188365 serine/threonine protein kinase; Provisional 99.86
TIGR02304430 aden_form_hyp probable adenylate-forming enzyme. M 99.71
KOG3628 1363 consensus Predicted AMP-binding protein [General f 99.61
PF1319373 AMP-binding_C: AMP-binding enzyme C-terminal domai 99.38
PF1374591 HxxPF_rpt: HxxPF-repeated domain; PDB: 2JGP_A. 99.18
PF04443365 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR 98.94
PF03321528 GH3: GH3 auxin-responsive promoter; InterPro: IPR0 98.34
PLN02249597 indole-3-acetic acid-amido synthetase 97.8
PLN02620612 indole-3-acetic acid-amido synthetase 97.71
PLN02247606 indole-3-acetic acid-amido synthetase 97.6
PF1453596 AMP-binding_C_2: AMP-binding enzyme C-terminal dom 97.35
COG1541438 PaaK Coenzyme F390 synthetase [Coenzyme metabolism 90.7
>PLN03052 acetate--CoA ligase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.7e-100  Score=883.89  Aligned_cols=722  Identities=61%  Similarity=1.067  Sum_probs=616.2

Q ss_pred             CCCcccccchhHHHHcCCCchhhHHHHHHHHHHhhhcCCCCchhhhHHHHHHHhcCCCCCCCCchhHHHHHhhcccccCC
Q 004821            1 MGKNIREVGVVDLVKVGLKVDEAEDFDNILKQLIDGSKGLDPKEIWKELVARKVFKPWHPHGLHQLLYYSVYNDWDASIN   80 (728)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~~hq~~Pf~~~lv~~l~~~~~~~~~~~~~f~~~~~~~~~~~   80 (728)
                      |||.+.|+++.||+++|+..++++.|.+.|++......+ +...+.-.. ..+.|+|+.+.+++|+|+|.++-+++....
T Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (728)
T PLN03052          4 AGKSVDEITVGDLEAAGLSPEEAEKFFKELQVILTRAGA-SPPSIWRRI-SQSLLTPSHPFALHQLMYYSCYKNWDSDTL   81 (728)
T ss_pred             ccCChhhcCHHHHHHcCCChHHHHHHHHHHHHHHHhhcC-CchHHHHHH-HHHhcCCCCCccHHHHhhhhcccCCCcccc
Confidence            689999999999999999999999999999999976653 666777777 788999999999999999999999988776


Q ss_pred             CCCCcCCCCchhhccCchHHHHHHhCCcccccccCCCCCCHHHHHHHHhhCHHHHHHHHHhhcccceeccceecccCCCC
Q 004821           81 GPPLYWFPSLDQSKLTNLGHAMEIHGPKFLGAMYKDPFTSFSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDK  160 (728)
Q Consensus        81 ~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~~~y~~~~~~~~lf~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~  160 (728)
                      .|.+.|.|.++....+++.-+++..+.......|..++.+|+.|++++++++..||..+++.+...|..++.++++..+.
T Consensus        82 ~~~~~w~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~sv~~~~~fw~~~~~~~~~~~~~~~~~v~~~~~~  161 (728)
T PLN03052         82 GPPPAWFPSPEIAKLTNLGRLLEARGKELLGSKYKDPISSFSEFQRFSVENPEVYWSIVLDELSLVFSVPPRCILDTSDE  161 (728)
T ss_pred             CCCCCCCCChhhcccchHHHHHHHhhhhhhHHhhCCChhhHHHHHHHHhhCHHHHHHHHHHhcCCCccCCCceeecCCCC
Confidence            67789999988888889988888765444434477777889999999999999999999999888899999998865333


Q ss_pred             CCCCCCcCCCCcchhhhcccccccccCCCCCceEEEEecCCCCCCCceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEE
Q 004821          161 SKHGGTWLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTM-FSKGDAIAID  239 (728)
Q Consensus       161 ~~~~~~~~~~~~~~~~~~~l~~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~  239 (728)
                      ..+..+|++++..|+++++++++.  +++||++|+++.+++.+++..+++||+||+++++++|+.|++. +++||+|+++
T Consensus       162 ~~~~~~wf~g~~ln~~~~~l~~~~--~~~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~  239 (728)
T PLN03052        162 SNPGGQWLPGAVLNVAECCLTPKP--SKTDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAID  239 (728)
T ss_pred             CCCCCEECCCCEeEHHHHHHHHHh--ccCCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence            445678999999999999998765  5689999999987633334467899999999999999999999 9999999999


Q ss_pred             cCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeccceeecCccccchHhHHhhCCCcEEEEecccC
Q 004821          240 MPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGD  319 (728)
Q Consensus       240 ~~~s~~~vva~lA~lkaGa~~vpl~p~~p~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (728)
                      ++|++++++++|||+++||+++|++|+++.+++.+++++++++++|+++...++++.++....+.+.....++++.....
T Consensus       240 ~pn~~e~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~  319 (728)
T PLN03052        240 MPMNVHAVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGK  319 (728)
T ss_pred             eCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCC
Confidence            99999999999999999999999999999999999999999999999998877788888777776665555565553321


Q ss_pred             CcccccccccccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCCceEEecCchHHHHHHHHhcccCCCCCCE
Q 004821          320 DVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHIDMKVGDV  399 (728)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~  399 (728)
                      ...........+|++++.............+...++++++||+|||||||+||||+++|++++..+......++++++|+
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~  399 (728)
T PLN03052        320 SVRVKLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDI  399 (728)
T ss_pred             ccccccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcE
Confidence            11111122356788776543210001112222335699999999999999999999999998887776666788999999


Q ss_pred             EEeecccchhhhhHHHHHHHHhCCEEEEecCCCChhhHHHHHHHcCCeEEecchHHHHHHHccCcCCCCCccceeeEEee
Q 004821          400 YCWPTNLGWVMGPIILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWTKIRSFAST  479 (728)
Q Consensus       400 ~l~~~~~~~~~~~~~i~~~l~~G~~lv~~~~~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~~Lr~v~~~  479 (728)
                      ++++++++|+++.+.++++|+.|++++++++.+++..+++++++++||++.++|++++.|.+.......++++||.+++|
T Consensus       400 ~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~~~~~dlssLr~i~s~  479 (728)
T PLN03052        400 VCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNCMAGLDWSSIRCFGST  479 (728)
T ss_pred             EEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhcCCcccCChhheeEEEec
Confidence            99999999999998889999999999999877777889999999999999999999999988765556789999999999


Q ss_pred             CCCCCcchHHHHHHhcCCCCeeccccccccccccccCCCCCCCcccccCCCCCCceEEEECCCCCcCCCCCCcceeEEEe
Q 004821          480 GETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSMLQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLF  559 (728)
Q Consensus       480 Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~iG~p~~~~~~~vld~~~~~~p~g~~~iGel~v~  559 (728)
                      ||+++++...|+....+..+++|.||+||++++++...+..+...+++|.|++|++++|+|++|+++|.|+.++|||++.
T Consensus       480 Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~~~~~~~~~~~~~~~~g~~g~p~~g~~v~v~d~~g~~v~~g~~~~GEL~v~  559 (728)
T PLN03052        480 GEASSVDDYLWLMSRAGYKPIIEYCGGTELGGGFVTGSLLQPQAFAAFSTPAMGCKLFILDDSGNPYPDDAPCTGELALF  559 (728)
T ss_pred             CCCCCHHHHHHHHHhcCCCCeEeeccChhhCcccccCCCCCCCCCCccccCCCCceEEEECCCCCCCCCCCCceEEEEEe
Confidence            99999999888887765568999999999987655544444556688999999999999999999999987556999998


Q ss_pred             cccCCCcccccccccccccccccccCCCccceecCCeEEEecCCcEEEEeecCCccccCceeechhhHHHHHccCCCcee
Q 004821          560 PLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESIL  639 (728)
Q Consensus       560 ~~y~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~  639 (728)
                      +.+++...++++.+.+..||..+|+.+|++||+|||++++|+||+++|+||+||+||++|+||++.|||++|+..||+|.
T Consensus       560 ~~~~~~~~~~~~~~~~~~yf~~~p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G~rI~~~EIE~~l~~~~p~V~  639 (728)
T PLN03052        560 PLMFGASSTLLNADHYKVYFKGMPVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGGIKVSSVEIERVCNAADESVL  639 (728)
T ss_pred             CCCCCCCccccCchhhhhhhhcCCCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCCEEeCHHHHHHHHHhcCCCcc
Confidence            87777666677777778899888888888899999999999999999999999999999999999999999954799999


Q ss_pred             eeeEEeecCCCCCceEEEEEEEEc--CCCCCCChHHHHHHHHHHHHHhcCCCcccceEEEcCCCCCCCCchhhHHHHHHH
Q 004821          640 ETAAISVSPAGGGPEVLVICVVLK--KGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQ  717 (728)
Q Consensus       640 ~a~vv~~~~~~~g~~~l~a~vv~~--~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~  717 (728)
                      ||+|++++++..|++++++||+++  ++.+ .+.++|+++++++|+++|+++++|+.|+++++||+|+|||++|+.|+++
T Consensus       640 eaaVvg~~d~~~g~e~~~afVvl~~~~g~~-~~~~~L~~~i~~~i~~~l~~~~~p~~i~~v~~lP~T~sGKi~Rr~Lr~~  718 (728)
T PLN03052        640 ETAAIGVPPPGGGPEQLVIAAVLKDPPGSN-PDLNELKKIFNSAIQKKLNPLFKVSAVVIVPSFPRTASNKVMRRVLRQQ  718 (728)
T ss_pred             eEEEEeeecCCCCcEEEEEEEEEecCCCCC-CCHHHHHHHHHHHHHhhcCCccCCCEEEEcCCCCCCCchHHHHHHHHHH
Confidence            999999998766558999999998  5554 5678999999999999999999999999999999999999999999999


Q ss_pred             HhcccccCCCC
Q 004821          718 LKHELSVRSRI  728 (728)
Q Consensus       718 ~~~~~~~~~~~  728 (728)
                      +.+... +|||
T Consensus       719 ~~~~~~-~~~~  728 (728)
T PLN03052        719 LAQELS-RSKL  728 (728)
T ss_pred             HHhhhh-ccCC
Confidence            977665 7775

>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism] Back     alignment and domain information
>PRK12467 peptide synthase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>PRK12316 peptide synthase; Provisional Back     alignment and domain information
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase Back     alignment and domain information
>PRK10252 entF enterobactin synthase subunit F; Provisional Back     alignment and domain information
>PTZ00237 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05691 peptide synthase; Validated Back     alignment and domain information
>PLN02654 acetate-CoA ligase Back     alignment and domain information
>TIGR02316 propion_prpE propionate--CoA ligase Back     alignment and domain information
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase Back     alignment and domain information
>PRK03584 acetoacetyl-CoA synthetase; Provisional Back     alignment and domain information
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase Back     alignment and domain information
>PRK00174 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK10524 prpE propionyl-CoA synthetase; Provisional Back     alignment and domain information
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism] Back     alignment and domain information
>PLN03051 acyl-activating enzyme; Provisional Back     alignment and domain information
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK07788 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK04319 acetyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06060 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PRK07529 AMP-binding domain protein; Validated Back     alignment and domain information
>PLN02860 o-succinylbenzoate-CoA ligase Back     alignment and domain information
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed Back     alignment and domain information
>PLN02574 4-coumarate--CoA ligase-like Back     alignment and domain information
>PRK13382 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PLN02246 4-coumarate--CoA ligase Back     alignment and domain information
>PLN02736 long-chain acyl-CoA synthetase Back     alignment and domain information
>PRK09274 peptide synthase; Provisional Back     alignment and domain information
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK05857 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PLN02614 long-chain acyl-CoA synthetase Back     alignment and domain information
>PRK07638 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06839 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08315 AMP-binding domain protein; Validated Back     alignment and domain information
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK12583 acyl-CoA synthetase; Provisional Back     alignment and domain information
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated Back     alignment and domain information
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated Back     alignment and domain information
>PRK08279 long-chain-acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02330 4-coumarate--CoA ligase-like 1 Back     alignment and domain information
>PRK05852 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1 Back     alignment and domain information
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06145 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase Back     alignment and domain information
>PRK07470 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK07868 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK12476 putative fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PLN03102 acyl-activating enzyme; Provisional Back     alignment and domain information
>PRK08316 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase Back     alignment and domain information
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional Back     alignment and domain information
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK07514 malonyl-CoA synthase; Validated Back     alignment and domain information
>PRK09088 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02861 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK10946 entE enterobactin synthase subunit E; Provisional Back     alignment and domain information
>PRK06087 short chain acyl-CoA synthetase; Reviewed Back     alignment and domain information
>PRK13390 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated Back     alignment and domain information
>PRK06018 putative acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK13388 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional Back     alignment and domain information
>PRK07798 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated Back     alignment and domain information
>PRK07787 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07867 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family Back     alignment and domain information
>PRK06188 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional Back     alignment and domain information
>PLN02479 acetate-CoA ligase Back     alignment and domain information
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK06164 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>TIGR03205 pimA dicarboxylate--CoA ligase PimA Back     alignment and domain information
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed Back     alignment and domain information
>PRK13383 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PTZ00216 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK06178 acyl-CoA synthetase; Validated Back     alignment and domain information
>PTZ00342 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PLN02387 long-chain-fatty-acid-CoA ligase family protein Back     alignment and domain information
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>PRK13391 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional Back     alignment and domain information
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PRK08180 feruloyl-CoA synthase; Reviewed Back     alignment and domain information
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK08308 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK08162 acyl-CoA synthetase; Validated Back     alignment and domain information
>PLN02430 long-chain-fatty-acid-CoA ligase Back     alignment and domain information
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional Back     alignment and domain information
>PRK12582 acyl-CoA synthetase; Provisional Back     alignment and domain information
>PRK09192 acyl-CoA synthetase; Validated Back     alignment and domain information
>TIGR01923 menE O-succinylbenzoate-CoA ligase Back     alignment and domain information
>PRK05850 acyl-CoA synthetase; Validated Back     alignment and domain information
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated Back     alignment and domain information
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism] Back     alignment and domain information
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism] Back     alignment and domain information
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism] Back     alignment and domain information
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ] Back     alignment and domain information
>TIGR01733 AA-adenyl-dom amino acid adenylation domain Back     alignment and domain information
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism] Back     alignment and domain information
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional Back     alignment and domain information
>PTZ00297 pantothenate kinase; Provisional Back     alignment and domain information
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family Back     alignment and domain information
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase Back     alignment and domain information
>TIGR03335 F390_ftsA coenzyme F390 synthetase Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>TIGR03089 conserved hypothetical protein TIGR03089 Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information
>PRK09188 serine/threonine protein kinase; Provisional Back     alignment and domain information
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme Back     alignment and domain information
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only] Back     alignment and domain information
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B Back     alignment and domain information
>PF13745 HxxPF_rpt: HxxPF-repeated domain; PDB: 2JGP_A Back     alignment and domain information
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria Back     alignment and domain information
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin Back     alignment and domain information
>PLN02249 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02620 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PLN02247 indole-3-acetic acid-amido synthetase Back     alignment and domain information
>PF14535 AMP-binding_C_2: AMP-binding enzyme C-terminal domain; PDB: 2Y27_A 2Y4N_A 3QOV_B 3S89_D 3LAX_A 2Y4O_B Back     alignment and domain information
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query728
2p2b_A652 Acetyl-coa Synthetase, V386a Mutation Length = 652 1e-40
2p2q_A652 Acetyl-Coa Synthetase, R584e Mutation Length = 652 1e-40
2p2f_A652 Acetyl-coa Synthetase, Wild-type With Acetate, Amp, 2e-40
2p20_A652 Acetyl-Coa Synthetase, R584a Mutation Length = 652 3e-40
2p2j_A652 Acetyl-Coa Synthetase, K609a Mutation Length = 652 8e-40
2p2m_A652 Acetyl-Coa Synthetase, R194a Mutation Length = 652 1e-39
1pg3_A652 Acetyl Coa Synthetase, Acetylated On Lys609 Length 2e-39
1ry2_A663 Crystal Structure Of Yeast Acetyl-Coenzyme A Synthe 7e-25
3r44_A517 Mycobacterium Tuberculosis Fatty Acyl Coa Synthetas 2e-10
3b7w_A570 Crystal Structure Of Human Acyl-Coa Synthetase Medi 6e-09
2wd9_A569 Crystal Structure Of Human Acyl-coa Synthetase Medi 6e-09
3t5b_A396 Crystal Structure Of N-Terminal Domain Of Facl13 Fr 4e-08
3etc_A580 2.1 A Structure Of Acyl-Adenylate Synthetase From M 1e-07
3o82_A544 Structure Of Base N-Terminal Domain From Acinetobac 1e-06
2v7b_A529 Crystal Structures Of A Benzoate Coa Ligase From Bu 3e-06
1md9_A539 Crystal Structure Of Dhbe In Complex With Dhb And A 9e-06
4gr5_A570 Crystal Structure Of Slgn1deltaasub In Complex With 9e-06
1mdb_A539 Crystal Structure Of Dhbe In Complex With Dhb-adeny 9e-06
3rg2_A617 Structure Of A Two-Domain Nrps Fusion Protein Conta 9e-06
1ult_A541 Crystal Structure Of Tt0168 From Thermus Thermophil 2e-05
3g7s_A549 Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Li 9e-05
3a9u_A536 Crystal Structures And Enzymatic Mechanisms Of A Po 4e-04
>pdb|2P2B|A Chain A, Acetyl-coa Synthetase, V386a Mutation Length = 652 Back     alignment and structure 
Iteration: 1

 Score =  164 bits (416), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 154/574 (26%), Positives = 248/574 (43%), Gaps = 51/574 (8%)
Query: 167 WLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANAL 226
           W     LN+A  CL     L++  D  A++W  D  D S    ++Y+EL   V   AN L
Sbjct: 69  WYEDGTLNLAANCL--DRHLQENGDRTAIIWEGD--DTSQSKHISYRELHRDVCRFANTL 124
Query: 227 -DTMFSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIF 285
            D    KGD +AI MPM   A +  LA    G V   I   F+   +A R+  S ++ + 
Sbjct: 125 LDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGRIIDSSSRLVI 184
Query: 286 TQDFILRGGRKFPLYSKVAEAGPLK---------AVVLPVIGDDVGIQLRQQDVSWKDFL 336
           T D  +R GR  PL   V +A  LK          +VL   G D+  Q   +D+ W+D +
Sbjct: 185 TADEGVRAGRSIPLKKNVDDA--LKNPNVTSVEHVIVLKRTGSDIDWQ-EGRDLWWRDLI 241
Query: 337 SCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHI-DMK 395
                   P++ P      D +  IL++SG+TG+PK +  T    +  AA  + ++ D  
Sbjct: 242 EKAS----PEHQPEAMNAEDPLF-ILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYH 296
Query: 396 VGDVYCWPTNLGWVMG-PIILFSSFLSGAALALYHGS---PLERSFGKFVQDSGVSVLGT 451
            GD+Y    ++GWV G   +L+     GA   ++ G    P      + V    V++L T
Sbjct: 297 PGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYT 356
Query: 452 VPSLVKAW--KNTNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYYK--PIIECCGGT 507
            P+ ++A   +    ++G D + +R   S GE  N +   W   K   +  P+++    T
Sbjct: 357 APTAIRALMAEGDKAIEGTDRSSLRILGSAGEPINPEAWEWYWKKIGKEKCPVVDTWWQT 416
Query: 508 ELASSYIQGSMLQPQAFG-AFSTATMTTGF-----VILDELGVPYPDDQPCVGEVGLFPL 561
           E       G M+ P          + T  F      ++D  G  +P +    G + +   
Sbjct: 417 ETG-----GFMITPLPGAIELKAGSATRPFFGVQPALVDNEG--HPQEGATEGNLVITDS 469
Query: 562 YLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIK 621
           + G   R L  DHE    +    +K M+    GD  +R   GY  + GR DD +N+ G +
Sbjct: 470 WPGQA-RTLFGDHERFEQTYFSTFKNMYFS--GDGARRDEDGYYWITGRVDDVLNVSGHR 526
Query: 622 TSSVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKA 681
             + EIE     A   I E A + +  A  G + +   V L  G   +P  +L       
Sbjct: 527 LGTAEIESALV-AHPKIAEAAVVGIPHAIKG-QAIYAYVTLNHG--EEPSPELYAEVRNW 582
Query: 682 IQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLK 715
           +++ + PL    ++      P+T S K++RR+L+
Sbjct: 583 VRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILR 616
>pdb|2P2Q|A Chain A, Acetyl-Coa Synthetase, R584e Mutation Length = 652 Back     alignment and structure
>pdb|2P2F|A Chain A, Acetyl-coa Synthetase, Wild-type With Acetate, Amp, And Coa Bound Length = 652 Back     alignment and structure
>pdb|2P20|A Chain A, Acetyl-Coa Synthetase, R584a Mutation Length = 652 Back     alignment and structure
>pdb|2P2J|A Chain A, Acetyl-Coa Synthetase, K609a Mutation Length = 652 Back     alignment and structure
>pdb|2P2M|A Chain A, Acetyl-Coa Synthetase, R194a Mutation Length = 652 Back     alignment and structure
>pdb|1PG3|A Chain A, Acetyl Coa Synthetase, Acetylated On Lys609 Length = 652 Back     alignment and structure
>pdb|1RY2|A Chain A, Crystal Structure Of Yeast Acetyl-Coenzyme A Synthetase In Complex With Amp Length = 663 Back     alignment and structure
>pdb|3R44|A Chain A, Mycobacterium Tuberculosis Fatty Acyl Coa Synthetase Length = 517 Back     alignment and structure
>pdb|3B7W|A Chain A, Crystal Structure Of Human Acyl-Coa Synthetase Medium-Chain Family Member 2a, With L64p Mutation Length = 570 Back     alignment and structure
>pdb|2WD9|A Chain A, Crystal Structure Of Human Acyl-coa Synthetase Medium-chain Family Member 2a (l64p Mutation) In Complex With Ibuprofen Length = 569 Back     alignment and structure
>pdb|3T5B|A Chain A, Crystal Structure Of N-Terminal Domain Of Facl13 From Mycobacterium Tuberculosis Length = 396 Back     alignment and structure
>pdb|3ETC|A Chain A, 2.1 A Structure Of Acyl-Adenylate Synthetase From Methanosarcina Acetivorans Containing A Link Between Lys256 And Cys298 Length = 580 Back     alignment and structure
>pdb|3O82|A Chain A, Structure Of Base N-Terminal Domain From Acinetobacter Baumannii Bound To 5'-O-[n-(2,3-Dihydroxybenzoyl)sulfamoyl] Adenosine Length = 544 Back     alignment and structure
>pdb|2V7B|A Chain A, Crystal Structures Of A Benzoate Coa Ligase From Burkholderia Xenovorans Lb400 Length = 529 Back     alignment and structure
>pdb|1MD9|A Chain A, Crystal Structure Of Dhbe In Complex With Dhb And Amp Length = 539 Back     alignment and structure
>pdb|4GR5|A Chain A, Crystal Structure Of Slgn1deltaasub In Complex With Ampcpp Length = 570 Back     alignment and structure
>pdb|1MDB|A Chain A, Crystal Structure Of Dhbe In Complex With Dhb-adenylate Length = 539 Back     alignment and structure
>pdb|3RG2|A Chain A, Structure Of A Two-Domain Nrps Fusion Protein Containing The Ente Adenylation Domain And Entb Aryl-Carrier Protein From Enterobactin Biosynthesis Length = 617 Back     alignment and structure
>pdb|1ULT|A Chain A, Crystal Structure Of Tt0168 From Thermus Thermophilus Hb8 Length = 541 Back     alignment and structure
>pdb|3G7S|A Chain A, Crystal Structure Of A Long-Chain-Fatty-Acid-Coa Ligase (Fadd1) From Archaeoglobus Fulgidus Length = 549 Back     alignment and structure
>pdb|3A9U|A Chain A, Crystal Structures And Enzymatic Mechanisms Of A Populus Tomentosa 4- Coumarate--Coa Ligase Length = 536 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query728
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 2e-50
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 3e-47
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 9e-41
1pg4_A652 Acetyl-COA synthetase; AMP-forming, adenylate-form 2e-34
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 1e-27
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 7e-27
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 3e-26
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 4e-26
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 5e-06
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 4e-25
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 8e-25
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 4e-08
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 2e-24
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 7e-05
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 3e-24
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 9e-24
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 6e-08
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 2e-23
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 2e-23
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 2e-09
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 3e-23
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 7e-23
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 3e-16
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 2e-05
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 1e-15
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 8e-06
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 1e-09
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 9e-09
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 4e-08
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 4e-06
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 4e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-08
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 7e-05
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Length = 529 Back     alignment and structure
 Score =  183 bits (468), Expect = 2e-50
 Identities = 112/568 (19%), Positives = 187/568 (32%), Gaps = 72/568 (12%)

Query: 167 WLPGSVLNVAECCLLPSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANAL 226
             P ++ N A                 A +  +           TY EL ER    A+AL
Sbjct: 17  EAPPALFNFAAYLF---RLNETRAGKTAYID-DTG-------STTYGELEERARRFASAL 65

Query: 227 DTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIF 285
            T+     + I + M  TV   + +L  + AG V V         +    L  S A+ + 
Sbjct: 66  RTLGVHPEERILLVMLDTVALPVAFLGALYAGVVPVVANTLLTPADYVYMLTHSHARAVI 125

Query: 286 TQDFILRGGRKFPLYSKVAEAGPLKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGP 345
               ++         ++  E+       L V          +    +++ +         
Sbjct: 126 ASGALV------QNVTQALESAEHDGCQLIVSQPRES--EPRLAPLFEELID-----AAA 172

Query: 346 KYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPI---RCAAEAWGHIDMKVGDVYCW 402
                     D +   L+SSG+TG+PK    T  +        A+    + +   DV   
Sbjct: 173 PAAKAAATGCDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELYAKPI--LGIAENDVVFS 230

Query: 403 PTNLGWVMGPI-ILFSSFLSGAALALYHGSPLERSFGKFVQDSGVSVLGTVPSLVKAWKN 461
              L +  G    L      GA   L    P   +    + +   +V   VP+L      
Sbjct: 231 AAKLFFAYGLGNGLTFPLSVGATAILMAERPTADAIFARLVEHRPTVFYGVPTLYANMLV 290

Query: 462 TNCLQGLDWTKIRSFASTGETSNVDDDLWLASKAYY-KPIIECCGGTELASSYIQGSM-L 519
           +  L       IR   S GE      ++     A++   I++  G TE    +I  S   
Sbjct: 291 SPNLPARADVAIRICTSAGEALPR--EIGERFTAHFGCEILDGIGSTE--MLHIFLSNRA 346

Query: 520 QPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEV-----GLFPLYLGATDRLLNADH 574
               +G            + DE G   PD +  VG++         +Y    ++      
Sbjct: 347 GAVEYGTTGRPVPGYEIELRDEAGHAVPDGE--VGDLYIKGPSAAVMYWNNREKSRATFL 404

Query: 575 EEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGA 634
            E   S             GD   R   G  +  GR+DD + + G   S VE+E V    
Sbjct: 405 GEWIRS-------------GDKYCRLPNGCYVYAGRSDDMLKVSGQYVSPVEVEMVL-VQ 450

Query: 635 DESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQ----RNLNPLF 690
            +++LE A + V   G         VVLK+ F    +        + ++      L P  
Sbjct: 451 HDAVLEAAVVGVDHGGL--VKTRAFVVLKREFAPSEILA------EELKAFVKDRLAP-H 501

Query: 691 KV-SLVKIVLEFPRTASNKLLRRVLKDQ 717
           K    +  V + P+TA+ K+ R  L++Q
Sbjct: 502 KYPRDIVFVDDLPKTATGKIQRFKLREQ 529
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Length = 570 Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Length = 580 Back     alignment and structure
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Length = 652 Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* Length = 503 Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Length = 501 Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Length = 517 Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Length = 663 Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Length = 663 Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Length = 979 Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Length = 539 Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Length = 539 Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Length = 549 Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Length = 549 Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Length = 548 Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} PDB: 3o82_A* 3o84_A* Length = 544 Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} PDB: 3o82_A* 3o84_A* Length = 544 Back     alignment and structure
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Length = 536 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Length = 617 Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Length = 617 Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} PDB: 1ba3_A 1lci_A* 3ies_A* 3iep_A* 3ier_A* 3qya_A Length = 550 Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} Length = 509 Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Length = 504 Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Length = 504 Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Length = 505 Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Length = 505 Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Length = 480 Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Length = 541 Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Length = 590 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Length = 562 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query728
2vsq_A 1304 Surfactin synthetase subunit 3; ligase, peptidyl c 100.0
1pg4_A652 Acetyl-COA synthetase; AMP-forming, adenylate-form 100.0
1ry2_A663 Acetyl-coenzyme A synthetase 1, acyl-activating en 100.0
3etc_A580 AMP-binding protein; adenylate-forming acyl-COA sy 100.0
4dg8_A620 PA1221; ANL superfamily, adenylation domain, pepti 100.0
3ni2_A536 4-coumarate:COA ligase; 4CL, phenylpropanoid biosy 100.0
3g7s_A549 Long-chain-fatty-acid--COA ligase (FADD-1); protei 100.0
4fuq_A503 Malonyl COA synthetase; ANL superfamily, methylma 100.0
3e7w_A511 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
1mdb_A539 2,3-dihydroxybenzoate-AMP ligase; adenylation doma 100.0
3fce_A512 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
3r44_A517 Fatty acyl COA synthetase FADD13 (fatty-acyl-COA s 100.0
3rg2_A617 Enterobactin synthase component E (ENTE), 2,3-DIH 100.0
1amu_A563 GRSA, gramicidin synthetase 1; peptide synthetase, 100.0
3tsy_A 979 Fusion protein 4-coumarate--COA ligase 1, resvera 100.0
2d1s_A548 Luciferase, luciferin 4-monooxygenase; alpha/beta, 100.0
3l8c_A521 D-alanine--poly(phosphoribitol) ligase subunit 1; 100.0
1t5h_X504 4-chlorobenzoyl COA ligase; adenylate-forming coen 100.0
4gr5_A570 Non-ribosomal peptide synthetase; MBTH-like domain 100.0
3c5e_A570 Acyl-coenzyme A synthetase ACSM2A, mitochondrial; 100.0
3o83_A544 Peptide arylation enzyme; ligase, adenylation of 2 100.0
1v25_A541 Long-chain-fatty-acid-COA synthetase; ligase, stru 100.0
3rix_A550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 100.0
3ivr_A509 Putative long-chain-fatty-acid COA ligase; structu 100.0
2v7b_A529 Benzoate-coenzyme A ligase; benzoate oxidation, be 100.0
3nyq_A505 Malonyl-COA ligase; A/B topology ababa sandwich be 100.0
3ipl_A501 2-succinylbenzoate--COA ligase; structural genomic 100.0
3ite_A562 SIDN siderophore synthetase; ligase, non-ribosomal 100.0
3kxw_A590 Saframycin MX1 synthetase B; fatty acid AMP ligase 100.0
3gqw_A576 Fatty acid AMP ligase; FAAL, E. coli, ATP-dependen 100.0
3t5a_A480 Long-chain-fatty-acid--AMP ligase FADD28; acetyl-C 100.0
4gs5_A358 Acyl-COA synthetase (AMP-forming)/AMP-acid ligase 100.0
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 100.0
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 100.0
3hgu_A369 EHPF; phenazine, antibiotic, biosynthetic protein; 99.98
3lax_A109 Phenylacetate-coenzyme A ligase; structural genomi 99.6
3gxs_A109 Phenylacetate-coenzyme A ligase; APC62324.1, struc 99.57
4b2g_A609 GH3-1 auxin conjugating enzyme; signaling protein, 98.83
4eql_A581 4-substituted benzoates-glutamate ligase GH3.12; f 98.8
4epl_A581 Jasmonic acid-amido synthetase JAR1; ANL adenylati 98.77
2jgp_A520 Tyrocidine synthetase 3; multifunctional enzyme, a 98.67
4hvm_A493 Tlmii; PSI-biology, midwest center for structural 98.25
1l5a_A436 Amide synthase, VIBH; nonribosomal peptide synthet 98.19
2xhg_A466 Tyrocidine synthetase A; isomerase, nonribosomal p 97.22
1q9j_A422 PAPA5, polyketide synthase associated protein 5; c 91.84
2y27_A437 Phenylacetate-coenzyme A ligase; phenylacetic acid 85.7
3qov_A436 Phenylacetate-coenzyme A ligase; acetyl-COA synthe 84.61
2y4o_A443 Phenylacetate-coenzyme A ligase; phenylacetic acid 84.05
3rix_A 550 Luciferase, luciferin 4-monooxygenase; oxidoreduct 80.78
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis} Back     alignment and structure
Probab=100.00  E-value=3.2e-95  Score=899.46  Aligned_cols=634  Identities=17%  Similarity=0.175  Sum_probs=515.7

Q ss_pred             hHHHHcCCCchhhHHHHHHHHHHhhhcCCC-CchhhhHHHHHHHhcCCCCCCCCchhHHHHHhhcccccCCCC-------
Q 004821           11 VDLVKVGLKVDEAEDFDNILKQLIDGSKGL-DPKEIWKELVARKVFKPWHPHGLHQLLYYSVYNDWDASINGP-------   82 (728)
Q Consensus        11 ~~~~~~~~~~~~~~~f~~~l~~~~~~~~~~-~hq~~Pf~~~lv~~l~~~~~~~~~~~~~f~~~~~~~~~~~~~-------   82 (728)
                      .|.+.+++.+++..+|.++|+++++...++ +||+|||++ |++.++   .   .|+  |++|+++++.....       
T Consensus       299 vntlplr~~~~~~~s~~~ll~~v~~~~~~a~~hq~~p~~~-i~~~l~---~---~~l--f~~~~~~~~~~~~~~~~~~~~  369 (1304)
T 2vsq_A          299 INVVPRRVKLSEGITFNGLLKRLQEQSLQSEPHQYVPLYD-IQSQAD---Q---PKL--IDHIIVFENYPLQDAKNEESS  369 (1304)
T ss_dssp             CEEEEEEEECCTTCBHHHHHHHHHHHHHHHGGGTTSCHHH-HHHSSS---C---SSS--CCCEEEECSSCHHHHSCCCHH
T ss_pred             eeEEEEEecCCCCCcHHHHHHHHHHHHHHhhhcccCCHHH-HHHHhC---C---Ccc--cceeEEEeecccccccccccc
Confidence            567788999999999999999999986666 999999999 999885   2   344  66666665432100       


Q ss_pred             --CCcCCCC-chhhccCchHHHHHHhCCcccccc-cCCCCCCHHHHHHHHhhCHHHHHHHHHhhcccceeccceec--cc
Q 004821           83 --PLYWFPS-LDQSKLTNLGHAMEIHGPKFLGAM-YKDPFTSFSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCI--LD  156 (728)
Q Consensus        83 --~~~~~~~-~~~~~~~dl~~~~~~~~~~~~~~~-y~~~~~~~~lf~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~--l~  156 (728)
                        ....... ....++|||++.+.. ++++.+.+ |++     ++|++++|++|.++|.++|++++.+|+.+..++  ++
T Consensus       370 ~~g~~~~~~~~~~~~~~dL~l~~~~-~~~l~~~~~y~~-----~lf~~~~i~~l~~~~~~lL~~l~~~p~~~~~~~~~l~  443 (1304)
T 2vsq_A          370 ENGFDMVDVHVFEKSNYDLNLMASP-GDEMLIKLAYNE-----NVFDEAFILRLKSQLLTAIQQLIQNPDQPVSTINLVD  443 (1304)
T ss_dssp             HHSEEEEEEEECCCCCSSEEEEEEC-SSSCEEEEEEET-----TTSCHHHHHHHHHHHHHHHHHHHHSTTSBGGGCCCCC
T ss_pred             cCCceeEeeecccccccCeEEEEec-CCcEEEEEEECC-----ccCCHHHHHHHHHHHHHHHHHhccCccccccccCCCC
Confidence              0000000 013567898887643 56788888 999     999999999999999999999988888777664  33


Q ss_pred             CCCCCCCCCCcCCCCcchhhhcccc--cccccCCCCCceEEEEecCCCCCCCceeecHHHHHHHHHHHHHHHHhh-cCCC
Q 004821          157 RTDKSKHGGTWLPGSVLNVAECCLL--PSSRLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTM-FSKG  233 (728)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~a~~~pd~~Al~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~g  233 (728)
                      ..+....+..|+.+..... ..+++  +..+++++||++|+++.++        ++||+||+++++++|++|++. +++|
T Consensus       444 ~~e~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~p~~~Av~~~~~--------~lTY~eL~~~a~~lA~~L~~~Gv~~g  514 (1304)
T 2vsq_A          444 DREREFLLTGLNPPAQAHE-TKPLTYWFKEAVNANPDAPALTYSGQ--------TLSYRELDEEANRIARRLQKHGAGKG  514 (1304)
T ss_dssp             HHHHHHHHTTTSCCCCCCC-CCCHHHHHHHHHHHCTTSEEEESSSC--------EEEHHHHHHHHHHHHHHHHHTTCCTT
T ss_pred             HHHHHHHHHhcCCCCCCCC-CCCHHHHHHHHHHhCCCCeEEEECCe--------eEcHHHHHHHHHHHHHHHHhcCcCCc
Confidence            3333334567776544332 23444  2446789999999998776        999999999999999999999 9999


Q ss_pred             CEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHHHHHhcCeeEEEeccceeecCccccchHhHHhhCCCcEEE
Q 004821          234 DAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAGPLKAVV  313 (728)
Q Consensus       234 d~V~i~~~~s~~~vva~lA~lkaGa~~vpl~p~~p~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (728)
                      ++|+|+++||+++++++|||+|+|++||||||.+|.+|+.+++++++++++|++.........++         .....+
T Consensus       515 ~~V~i~~~~s~~~vv~~lailkaG~~~vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~~---------~~~~~~  585 (1304)
T 2vsq_A          515 SVVALYTKRSLELVIGILGVLKAGAAYLPVDPKLPEDRISYMLADSAAACLLTHQEMKEQAAELP---------YTGTTL  585 (1304)
T ss_dssp             CEEEECCCSSHHHHHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCCEEEECSTTCTTSTTCC---------CCSEEE
T ss_pred             CEEEEEeCCCHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHcCCCEEEECcchhhhhhccC---------CCCcEE
Confidence            99999999999999999999999999999999999999999999999999999875432111110         011111


Q ss_pred             EecccCCcccccccccccHHHHhcccCCCCCCCCCCCccCCCCCeEEEEeccCCCCCCceEEecCchHHHHHHHHhcccC
Q 004821          314 LPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKYYPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHID  393 (728)
Q Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~  393 (728)
                      +.. .          .   ..... .      ...+.....++++|||+|||||||+||||+++|+++.+. .+....++
T Consensus       586 ~~~-~----------~---~~~~~-~------~~~~~~~~~~~~~ayiiyTSGSTG~PKgV~~~h~~l~~~-~~~~~~~~  643 (1304)
T 2vsq_A          586 FID-D----------Q---TRFEE-Q------ASDPATAIDPNDPAYIMYTSGTTGKPKGNITTHANIQGL-VKHVDYMA  643 (1304)
T ss_dssp             ESS-C----------G---GGGGS-C------SSCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHH-HSSCCSSC
T ss_pred             Eec-c----------c---ccccc-c------cCCCCCCCCCCCeEEEEeCCCCCCCCCEEEEehHHHHHH-HHHHHhcC
Confidence            100 0          0   00000 0      011223456899999999999999999999999999876 55667789


Q ss_pred             CCCCCEEEeecccchhhhhHHHHHHHHhCCEEEEecC--CCChhhHHHHHHHcCCeEEecchHHHHHHHccCcCCCCCcc
Q 004821          394 MKVGDVYCWPTNLGWVMGPIILFSSFLSGAALALYHG--SPLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNCLQGLDWT  471 (728)
Q Consensus       394 ~~~~d~~l~~~~~~~~~~~~~i~~~l~~G~~lv~~~~--~~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~~~~~~l~  471 (728)
                      ++++|+++++++++||.+++++|.+|+.|+++++++.  ..++..+.++|++++||++.++|++++.|.+...   ..++
T Consensus       644 ~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~---~~~~  720 (1304)
T 2vsq_A          644 FSDQDTFLSVSNYAFDAFTFDFYASMLNAARLIIADEHTLLDTERLTDLILQENVNVMFATTALFNLLTDAGE---DWMK  720 (1304)
T ss_dssp             CCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEECCGGGTTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCS---HHHH
T ss_pred             CCCCCEEEEECCccHHHHHHHHHHHHHcCCEEEECChhhcCCHHHHHHHHHHcCCcEEEccHHHHHHHHhhch---hcCC
Confidence            9999999999999999999999999999999999875  3578899999999999999999999999986532   2367


Q ss_pred             ceeeEEeeCCCCCcchHHHHHHhcCCCCeeccccccccccccccCCCC---CCCcccccCCCCCCceEEEECCCCCcCCC
Q 004821          472 KIRSFASTGETSNVDDDLWLASKAYYKPIIECCGGTELASSYIQGSML---QPQAFGAFSTATMTTGFVILDELGVPYPD  548 (728)
Q Consensus       472 ~Lr~v~~~Ge~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~---~~~~~~~iG~p~~~~~~~vld~~~~~~p~  548 (728)
                      +||.+++|||++++++.+++.+.+++++++|.||+||++++++.....   ......++|+|++|++++|+|++++++|.
T Consensus       721 ~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~iG~p~~~~~~~i~d~~~~~~p~  800 (1304)
T 2vsq_A          721 GLRCILFGGERASVPHVRKALRIMGPGKLINCYGPTEGTVFATAHVVHDLPDSISSLPIGKPISNASVYILNEQSQLQPF  800 (1304)
T ss_dssp             TCSEEEEESSCCCHHHHHHHHHHHCTTCEEEEECCGGGSSCSEEEECCCCCSSCSSCCCBEECTTEEEEEECTTSCBCCT
T ss_pred             CccEEEEecCCCCHHHHHHHHHhCCCCEEEEeEChhHHhHHheeeeccCccccCCCCCCceeeCCCEEEEECCCcCCCCC
Confidence            899999999999999988888887778999999999999765544321   22345689999999999999999999999


Q ss_pred             CCCcceeEEE-----ecccCCCcccccccccccccccccccCCCccceecCCeEEEecCCcEEEEeecCCccccCceeec
Q 004821          549 DQPCVGEVGL-----FPLYLGATDRLLNADHEEVYFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTS  623 (728)
Q Consensus       549 g~~~iGel~v-----~~~y~~~~~~~~~~~~t~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~  623 (728)
                      |+.  |||+|     +.||++      +++.|+++|+.+|+.+|.+||||||+|+|++||+|+|+||.|||||+||+||+
T Consensus       801 G~~--GEl~i~G~~v~~GY~~------~p~~T~~~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rie  872 (1304)
T 2vsq_A          801 GAV--GELCISGMGVSKGYVN------RADLTKEKFIENPFKPGETLYRTGDLARWLPDGTIEYAGRIDDQVKIRGHRIE  872 (1304)
T ss_dssp             TCC--EEEEEEETTCCCCBTT------CHHHHHHHEEECTTSTTCEEEEEEEEEEECTTSCEEEEEEGGGEEEETTEEEE
T ss_pred             CCc--eEEEEeccccCccccC------CcccchhhhccCCCCCCCeeEecCCeEEEcCCCeEEEEcCCCCEEEECCEeeC
Confidence            996  99999     567777      55689999999999889999999999999999999999999999999999999


Q ss_pred             hhhHHHHHccCCCceeeeeEEeecCCCCCceEEEEEEEEcCCCCCCChHHHHHHHHHHHHHhcCCCcccceEEEcCCCCC
Q 004821          624 SVEIERVCDGADESILETAAISVSPAGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPR  703 (728)
Q Consensus       624 ~~eIE~~l~~~~p~V~~a~vv~~~~~~~g~~~l~a~vv~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~  703 (728)
                      |+|||++|. +||+|++|+|++.++..++ +.++|||+....   .+.++++    ++|+++||.||+|+.|+++++||+
T Consensus       873 ~~eIE~~l~-~~p~V~~a~V~~~~~~~~~-~~l~a~vv~~~~---~~~~~l~----~~l~~~Lp~ymvP~~~~~l~~lP~  943 (1304)
T 2vsq_A          873 LEEIEKQLQ-EYPGVKDAVVVADRHESGD-ASINAYLVNRTQ---LSAEDVK----AHLKKQLPAYMVPQTFTFLDELPL  943 (1304)
T ss_dssp             HHHHHHHHH-HSSSCCEEEEEEECCSSSC-CEEEEEEECSSS---SCHHHHH----HHHHHHSCGGGSCSEEEEESCCCC
T ss_pred             HHHHHHHHH-hCCCCceEEEEEEecCCCC-EEEEEEEeCCCC---CCHHHHH----HHHHHhChHhhhccEEEEecccCC
Confidence            999999995 9999999999999887776 899999998653   4455554    467789999999999999999999


Q ss_pred             CCCchhhHHHHHHHHh
Q 004821          704 TASNKLLRRVLKDQLK  719 (728)
Q Consensus       704 t~~GKvdR~~L~~~~~  719 (728)
                      |+||||||++|++...
T Consensus       944 t~~GKidR~~L~~~~~  959 (1304)
T 2vsq_A          944 TTNGKVNKRLLPKPDQ  959 (1304)
T ss_dssp             CSSCSSCCSCCCCCCG
T ss_pred             CCCcccCHhhcCCcch
Confidence            9999999999987544
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A* Back     alignment and structure
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1 Back     alignment and structure
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans} Back     alignment and structure
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A* Back     alignment and structure
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A* Back     alignment and structure
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304} Back     alignment and structure
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A* Back     alignment and structure
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A* Back     alignment and structure
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A Back     alignment and structure
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A* Back     alignment and structure
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A Back     alignment and structure
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli} Back     alignment and structure
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1 Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A* Back     alignment and structure
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A* Back     alignment and structure
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X* Back     alignment and structure
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A Back     alignment and structure
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A* Back     alignment and structure
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A* Back     alignment and structure
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A* Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0 Back     alignment and structure
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans} Back     alignment and structure
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A* Back     alignment and structure
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp} Back     alignment and structure
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii} Back     alignment and structure
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A* Back     alignment and structure
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A Back     alignment and structure
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans} Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A* Back     alignment and structure
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus} Back     alignment and structure
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera} Back     alignment and structure
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A* Back     alignment and structure
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana} Back     alignment and structure
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis} Back     alignment and structure
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus} Back     alignment and structure
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis} Back     alignment and structure
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2 Back     alignment and structure
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A* Back     alignment and structure
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A* Back     alignment and structure
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia} Back     alignment and structure
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 728
d1pg4a_643 e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella en 1e-81
d1ry2a_640 e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast 2e-73
d1v25a_534 e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0 4e-49
d1lcia_541 e.23.1.1 (A:) Luciferase {Firefly (Photinus pyrali 4e-45
d1amua_514 e.23.1.1 (A:) Phenylalanine activating domain of g 5e-42
d1mdba_536 e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {B 3e-40
d3cw9a1503 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alc 5e-34
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Length = 643 Back     information, alignment and structure

class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

 Score =  270 bits (691), Expect = 1e-81
 Identities = 145/615 (23%), Positives = 253/615 (41%), Gaps = 36/615 (5%)

Query: 126 KFTVEHPEAYWEIVLKEISVKFHEAPKCILDRT-DKSKHGGTWLPGSVLNVAECCLLPSS 184
           K ++  P+ +W    K +   +    + + + +         W     LN+A  CL    
Sbjct: 25  KQSINDPDTFWGEQGKIL--DWITPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCL--DR 80

Query: 185 RLRKEDDSVAVVWREDRCDDSSVNRMTYKELRERVMLVANALDTM-FSKGDAIAIDMPMT 243
            L++  D  A++W  D  D S    ++Y+EL   V   AN L  +   KGD +AI MPM 
Sbjct: 81  HLQENGDRTAIIWEGD--DTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMV 138

Query: 244 VHAVIIYLAIILAGYVVVSIADSFAAREIATRLRVSKAKGIFTQDFILRGGRKFPLYSKV 303
             A +  LA    G V   I   F+   +A  +  S ++ + T D  +R GR  PL   V
Sbjct: 139 PEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNV 198

Query: 304 AEAGPLKAVVLPVIGDDVGIQLRQQDVSW---KDFLSCVDYHPGPKYYPPVYRPVDSVIN 360
            +A  LK   +  +   + ++    D+ W   +D             + P     +  + 
Sbjct: 199 DDA--LKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLF 256

Query: 361 ILFSSGTTGEPKAIPWTQLSPIRCAAEAWGHI-DMKVGDVYCWPTNLGWVMGPI-ILFSS 418
           IL++SG+TG+PK +  T    +  AA  + ++ D   GD+Y    ++GWV G   +L+  
Sbjct: 257 ILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGP 316

Query: 419 FLSGAALALYHGSPLERS---FGKFVQDSGVSVLGTVPSLVKAWKNTN--CLQGLDWTKI 473
              GA   ++ G P   +     + V    V++L T P+ ++A        ++G D + +
Sbjct: 317 LACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSL 376

Query: 474 RSFASTGETSNVDDDLWLASK--AYYKPIIECCGGTE---LASSYIQGSMLQPQAFGAFS 528
           R   S GE  N +   W   K      P+++    TE      + + G++      G+ +
Sbjct: 377 RILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAI--ELKAGSAT 434

Query: 529 TATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLNADHEEVYFSGMPIYKGM 588
                    ++D  G P        G + +   + G    L   DHE    +    +K M
Sbjct: 435 RPFFGVQPALVDNEGHPQEGATE--GNLVITDSWPGQARTLFG-DHERFEQTYFSTFKNM 491

Query: 589 HLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSP 648
           +    GD  +R   GY  + GR DD +N+ G +  + EIE     A   I E A + +  
Sbjct: 492 Y--FSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALV-AHPKIAEAAVVGIPH 548

Query: 649 AGGGPEVLVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNK 708
           A  G + +   V L  G    P    ++     +++ + PL    ++      P+T S K
Sbjct: 549 AIKG-QAIYAYVTLNHGEEPSPELYAEVR--NWVRKEIGPLATPDVLHWTDSLPKTRSGK 605

Query: 709 LLRRVLKDQLKHELS 723
           ++RR+L+     + S
Sbjct: 606 IMRRILRKIAAGDTS 620
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 640 Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Length = 534 Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Length = 541 Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Length = 514 Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Length = 536 Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Length = 503 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query728
d1pg4a_643 Acetyl-CoA synthetase {Salmonella enterica [TaxId: 100.0
d1ry2a_640 Acetyl-CoA synthetase {Baker's yeast (Saccharomyce 100.0
d1v25a_534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 100.0
d1lcia_541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 100.0
d1amua_514 Phenylalanine activating domain of gramicidin synt 100.0
d1mdba_536 Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtil 100.0
d3cw9a1503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 100.0
d1l5aa2250 VibH {Vibrio cholerae [TaxId: 666]} 98.23
d1v25a_ 534 Long chain fatty acid-CoA ligase TT0168 {Thermus t 89.44
d1lcia_ 541 Luciferase {Firefly (Photinus pyralis) [TaxId: 705 87.26
d3cw9a1 503 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId 81.91
d1q9ja2238 Polyketide synthase associated protein 5, PapA5 {M 81.65
d1amua_ 514 Phenylalanine activating domain of gramicidin synt 80.14
>d1pg4a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Salmonella enterica [TaxId: 28901]} Back     information, alignment and structure
class: Multi-domain proteins (alpha and beta)
fold: Acetyl-CoA synthetase-like
superfamily: Acetyl-CoA synthetase-like
family: Acetyl-CoA synthetase-like
domain: Acetyl-CoA synthetase
species: Salmonella enterica [TaxId: 28901]

Probab=100.00  E-value=9.9e-88  Score=772.01  Aligned_cols=582  Identities=25%  Similarity=0.379  Sum_probs=478.6

Q ss_pred             CCCCHHHHHHHHhhCHHHHHHHHHhhcccceeccceecccCCCC-CCCCCCcCCCCcchhhhcccccccccCCCCCceEE
Q 004821          117 PFTSFSLFQKFTVEHPEAYWEIVLKEISVKFHEAPKCILDRTDK-SKHGGTWLPGSVLNVAECCLLPSSRLRKEDDSVAV  195 (728)
Q Consensus       117 ~~~~~~lf~~~ti~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~a~~~pd~~Al  195 (728)
                      .+.+|+-+++++|+++..||..+++.  ..|..+++.+++.... .....+||.++.+|++++++++++  +.+||++|+
T Consensus        16 ~~~~y~~l~~~s~~~~~~fW~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~wf~~~~~N~~~n~ldrh~--~~~~d~~Al   91 (643)
T d1pg4a_          16 NPEQYETKYKQSINDPDTFWGEQGKI--LDWITPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCLDRHL--QENGDRTAI   91 (643)
T ss_dssp             CHHHHHHHHHHHHHCHHHHHHHHGGG--SCCSBCCSCCEEEECCTTCCEEEESTTCEECHHHHHTGGGH--HHHTTSEEE
T ss_pred             CHHHHHHHHHHHHhCHHHHHHHHHhh--eeEECCCcccccCccCCCCCCCeeCCCChhhHHHHHHHHHH--HhCCCCEEE
Confidence            34567899999999999999999987  5688888888765322 233457999999999999999987  678999999


Q ss_pred             EEecCCCCCCCceeecHHHHHHHHHHHHHHHHhh-cCCCCEEEEEcCCCHHHHHHHHHHHHhCcEEEecCCCCCHHHHHH
Q 004821          196 VWREDRCDDSSVNRMTYKELRERVMLVANALDTM-FSKGDAIAIDMPMTVHAVIIYLAIILAGYVVVSIADSFAAREIAT  274 (728)
Q Consensus       196 ~~~~~~~~~~~~~~lTY~eL~~~a~~lA~~L~~~-v~~gd~V~i~~~~s~~~vva~lA~lkaGa~~vpl~p~~p~~~l~~  274 (728)
                      ++.+.  +++..+++||+||+++++++|++|+++ |++||+|+|+++|++++++++|||+++||+++|++|.++.+++.+
T Consensus        92 i~~~~--~~~~~~~~TY~eL~~~v~~~A~~L~~~Gv~~Gd~V~i~~~n~~e~iv~~lA~~~~Gav~v~l~~~~~~~~l~~  169 (643)
T d1pg4a_          92 IWEGD--DTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAG  169 (643)
T ss_dssp             EEECS--STTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTSCHHHHHH
T ss_pred             EEEec--CCCCceEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecccchHHHHHHHHHHHhCeEEEecCCCCCHHHHHH
Confidence            98765  345567899999999999999999999 999999999999999999999999999999999999999999999


Q ss_pred             HHHhcCeeEEEeccceeecCccccchHhHHhhC-----C--CcEEEEecccCCcccccccccccHHHHhcccCCCCCCCC
Q 004821          275 RLRVSKAKGIFTQDFILRGGRKFPLYSKVAEAG-----P--LKAVVLPVIGDDVGIQLRQQDVSWKDFLSCVDYHPGPKY  347 (728)
Q Consensus       275 ~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (728)
                      +++++++++||+++...+..+............     .  ..++++......... .......+.+.......     .
T Consensus       170 ~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~  243 (643)
T d1pg4a_         170 CIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDW-QEGRDLWWRDLIEKASP-----E  243 (643)
T ss_dssp             HHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCCC-CBTTEEEHHHHHTTSCS-----C
T ss_pred             HHHhcCCCEEEEcchhhhhccccchhhhHHHHHhccccccceEEEEeccCCccccc-ccccchhhhhhhcccCc-----c
Confidence            999999999999998887777776665554432     1  233444332221111 11123334444333221     2


Q ss_pred             CCCccCCCCCeEEEEeccCCCCCCceEEecCchHHHH-HHHHhcccCCCCCCEEEeecccchhhhh-HHHHHHHHhCCEE
Q 004821          348 YPPVYRPVDSVINILFSSGTTGEPKAIPWTQLSPIRC-AAEAWGHIDMKVGDVYCWPTNLGWVMGP-IILFSSFLSGAAL  425 (728)
Q Consensus       348 ~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~-~~~~~~~~~~~~~d~~l~~~~~~~~~~~-~~i~~~l~~G~~l  425 (728)
                      ..+...+++|++||+|||||||+||||+++|++++.. .......++++++|++++.+|++|++++ +.++++|++|+++
T Consensus       244 ~~~~~~~~dd~a~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~l~~~L~~G~t~  323 (643)
T d1pg4a_         244 HQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATT  323 (643)
T ss_dssp             CCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHTTHHHHHTTCEE
T ss_pred             cCCCCCCCCCeEEEEeCCCcccCCCEEEEccHHHHHHHHHHHHHhhCCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEE
Confidence            3344567899999999999999999999999996544 4445567899999999999999999997 4678999999999


Q ss_pred             EEecCC---CChhhHHHHHHHcCCeEEecchHHHHHHHccCc--CCCCCccceeeEEeeCCCCCcchHHHHHHhcC--CC
Q 004821          426 ALYHGS---PLERSFGKFVQDSGVSVLGTVPSLVKAWKNTNC--LQGLDWTKIRSFASTGETSNVDDDLWLASKAY--YK  498 (728)
Q Consensus       426 v~~~~~---~~~~~l~~~i~~~~vt~l~~~P~~l~~l~~~~~--~~~~~l~~Lr~v~~~Ge~l~~~~~~~~~~~~~--~~  498 (728)
                      +++++.   .++..++++|++++||++.++|++++.|++...  ....++++||.+++|||++++++.+++.+.++  ++
T Consensus       324 vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~l~~l~~~~~~~~~~~dl~sLr~i~~~G~pl~~~~~~~~~~~~g~~~~  403 (643)
T d1pg4a_         324 LMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKC  403 (643)
T ss_dssp             EEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEESSCCCHHHHHHHHHHTTTTCS
T ss_pred             EEecCCCCCCCHHHHHHHHHHHCCcEEEehHHHHHHHHhCcchhccccCCCceEEEEEEeCCCCHHHHHHHHHHhCCCCc
Confidence            998753   378899999999999999999999999987653  34667899999999999999999999988864  57


Q ss_pred             CeeccccccccccccccCCC-CCCCcccccCCCCCCceEEEECCCCCcCCCCCCcceeEEEecccCCCcccccc-ccccc
Q 004821          499 PIIECCGGTELASSYIQGSM-LQPQAFGAFSTATMTTGFVILDELGVPYPDDQPCVGEVGLFPLYLGATDRLLN-ADHEE  576 (728)
Q Consensus       499 ~l~n~YG~TE~~~~~~~~~~-~~~~~~~~iG~p~~~~~~~vld~~~~~~p~g~~~iGel~v~~~y~~~~~~~~~-~~~t~  576 (728)
                      +++|.||+||++..++...+ ..+...+++|+|++|++++|+|++|++++.|+.  |||+|...+.+.+..|++ ++.+.
T Consensus       404 ~i~~~yG~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~ivd~~g~~~~~g~~--Gel~v~~~~p~~~~~~~~~~~~~~  481 (643)
T d1pg4a_         404 PVVDTWWQTETGGFMITPLPGAIELKAGSATRPFFGVQPALVDNEGHPQEGATE--GNLVITDSWPGQARTLFGDHERFE  481 (643)
T ss_dssp             CEEEEBCCGGGSSCSBCCCTTTCCBCTTCCBSBCTTCCEEEECTTCCBCCSSEE--EEEEECSCCTTCCCEETTCHHHHH
T ss_pred             eEEEeechhhccceEEecCCCccCCCCCccccccCCCEEEEECCCCCCCCCCce--EEEEEecCCCcccccccCChhhch
Confidence            89999999999876555433 334567899999999999999999999999985  999995433332222222 22232


Q ss_pred             c-cccccccCCCccceecCCeEEEecCCcEEEEeecCCccccCceeechhhHHHHHccCCCceeeeeEEeecCCCCCceE
Q 004821          577 V-YFSGMPIYKGMHLRRHGDIIKRTVGGYIIVQGRADDTMNLGGIKTSSVEIERVCDGADESILETAAISVSPAGGGPEV  655 (728)
Q Consensus       577 ~-~f~~~p~~~g~~~yrTGDl~~~~~dG~l~~~GR~dd~ik~~G~ri~~~eIE~~l~~~~p~V~~a~vv~~~~~~~g~~~  655 (728)
                      + +|..     ...||+|||+|++|+||+|+|+||+||+||++|+||+|.|||++|. +||+|.||+|++++++..| +.
T Consensus       482 ~~~~~~-----~~g~~~TGDl~~~d~dG~l~i~GR~dd~ik~~G~ri~p~eIE~~l~-~~p~V~eaaVvg~~d~~~g-e~  554 (643)
T d1pg4a_         482 QTYFST-----FKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALV-AHPKIAEAAVVGIPHAIKG-QA  554 (643)
T ss_dssp             HHHHSS-----STTSEEEEEEEEECTTSCEEEEEESSSEEEETTEEEEHHHHHHHHH-HSTTEEEEEEEEEEETTTE-EE
T ss_pred             hhhccc-----CCCeEEcCCEEEECCCceEEEecccccEEEECCEEECHHHHHHHHH-hCCCcceEEEEEEECCCCC-eE
Confidence            2 2322     2349999999999999999999999999999999999999999996 9999999999999998888 89


Q ss_pred             EEEEEEEcCCCCCCChHHHHHHHHHHHHHhcCCCcccceEEEcCCCCCCCCchhhHHHHHHHHhcc
Q 004821          656 LVICVVLKKGFTSQPVDKLKMIFSKAIQRNLNPLFKVSLVKIVLEFPRTASNKLLRRVLKDQLKHE  721 (728)
Q Consensus       656 l~a~vv~~~~~~~~~~~~l~~~l~~~l~~~Lp~~~~P~~i~~v~~lP~t~~GKvdR~~L~~~~~~~  721 (728)
                      ++|||+++++.+ . .+++.+.|+++++++||+||+|+.|+++++||+|+||||+|++|++++..+
T Consensus       555 ~~a~Vv~~~~~~-~-~~~~~~~i~~~~~~~L~~~~vP~~i~~v~~lP~T~sGKi~R~~Lr~~~~~~  618 (643)
T d1pg4a_         555 IYAYVTLNHGEE-P-SPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGD  618 (643)
T ss_dssp             EEEEEEECTTCC-C-CHHHHHHHHHHHHHHTCGGGCCSEEEECSCCCBCTTSCBCHHHHHHHHHTC
T ss_pred             EEEEEEECCCCC-C-CHHHHHHHHHHHHhhCCcccCccEEEEECCCCCCCCcCccHHHHHHHhcCC
Confidence            999999998865 3 366777888899999999999999999999999999999999999998764
>d1ry2a_ e.23.1.1 (A:) Acetyl-CoA synthetase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure
>d1mdba_ e.23.1.1 (A:) Dihydroxybenzoate-AMP ligase DhbE {Bacillus subtilis [TaxId: 1423]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure
>d1l5aa2 c.43.1.2 (A:175-424) VibH {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1v25a_ e.23.1.1 (A:) Long chain fatty acid-CoA ligase TT0168 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lcia_ e.23.1.1 (A:) Luciferase {Firefly (Photinus pyralis) [TaxId: 7054]} Back     information, alignment and structure
>d3cw9a1 e.23.1.1 (A:1-503) 4-chlorobenzoyl CoA ligase {Alcaligenes sp. [TaxId: 512]} Back     information, alignment and structure
>d1q9ja2 c.43.1.2 (A:181-418) Polyketide synthase associated protein 5, PapA5 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1amua_ e.23.1.1 (A:) Phenylalanine activating domain of gramicidin synthetase 1 {Bacillus brevis [TaxId: 1393]} Back     information, alignment and structure