Citrus Sinensis ID: 004998
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 720 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LJR3 | 845 | Protein SPA1-RELATED 3 OS | yes | no | 0.840 | 0.715 | 0.570 | 0.0 | |
| Q94BM7 | 794 | Protein SPA1-RELATED 4 OS | no | no | 0.773 | 0.701 | 0.539 | 1e-175 | |
| Q9SYX2 | 1029 | Protein SUPPRESSOR OF PHY | no | no | 0.698 | 0.488 | 0.341 | 5e-76 | |
| Q9T014 | 1036 | Protein SPA1-RELATED 2 OS | no | no | 0.425 | 0.295 | 0.342 | 3e-42 | |
| P93471 | 672 | E3 ubiquitin-protein liga | N/A | no | 0.384 | 0.412 | 0.323 | 2e-32 | |
| P43254 | 675 | E3 ubiquitin-protein liga | no | no | 0.4 | 0.426 | 0.296 | 4e-28 | |
| Q8NHY2 | 731 | E3 ubiquitin-protein liga | yes | no | 0.344 | 0.339 | 0.280 | 4e-21 | |
| Q9R1A8 | 733 | E3 ubiquitin-protein liga | yes | no | 0.344 | 0.338 | 0.274 | 5e-20 | |
| Q9Z1Z1 | 1108 | Eukaryotic translation in | no | no | 0.220 | 0.143 | 0.257 | 3e-13 | |
| Q9NZJ5 | 1116 | Eukaryotic translation in | no | no | 0.220 | 0.142 | 0.253 | 2e-11 |
| >sp|Q9LJR3|SPA3_ARATH Protein SPA1-RELATED 3 OS=Arabidopsis thaliana GN=SPA3 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/680 (57%), Positives = 483/680 (71%), Gaps = 75/680 (11%)
Query: 15 MEGSSDSAWQDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHG 74
MEGSS+S +SR N SGVSDRN L ER R S+ + + V G
Sbjct: 1 MEGSSNS------NSRGFNTSGVSDRNTEFLPVERLTTRSKPSSHVD-----EYVRSLFG 49
Query: 75 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIV 134
++ G ++ IDPFV ++EWGDVSLRQWLDKP+RSVDV+ECLH+FRQIVEIV
Sbjct: 50 STSTHKSGE----DDSLGIDPFVRSLEWGDVSLRQWLDKPERSVDVFECLHVFRQIVEIV 105
Query: 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 194
AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDS E+G +Q K++ S
Sbjct: 106 NAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSLEDGPISQ----KEIGSS- 160
Query: 195 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNV 254
RRE+ +S+A ++ Y +K+L+ ++
Sbjct: 161 -----------RREEA---------VSKAIAIEEKGVY------------NKLLERKIEK 188
Query: 255 EQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEK 314
+ EEK QPFPMK IL MET+WY SPEE G+ +CASD+YRLGVLLFELFCP + EEK
Sbjct: 189 LE-EEKTQPFPMKHILAMETSWYTSPEEDFGSSSTCASDVYRLGVLLFELFCPVPSREEK 247
Query: 315 TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 374
+RTMSSLRHRVLPPQ+LLK PKEASFCLWLLHPEP+ RP M +LLQSEF+ EPRD++EER
Sbjct: 248 SRTMSSLRHRVLPPQILLKCPKEASFCLWLLHPEPTCRPSMSDLLQSEFITEPRDNLEER 307
Query: 375 EAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGG 434
EAAIELR++I+E+E LLEFLLL+QQRKQESA +LQD VS + SDIE+V K+Q IL+K+G
Sbjct: 308 EAAIELRDRIEEQESLLEFLLLIQQRKQESAYRLQDTVSLLSSDIEQVVKRQLILKKRG- 366
Query: 435 LGSFAELANDD---LSGLNIPSLNIIDNDCSATMGSRKRFRPE-LQLHHLEECDDNLDDN 490
S ++ + DD SG + S + + SA + SRKR R L L + E D+
Sbjct: 367 -SSLSDFSKDDHQYTSGQPLMSFQ-ANEEPSAFLASRKRVRQGILALENGVEVDEE---- 420
Query: 491 QKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVK--PSGRPLVRHSQLSSDGRTS 548
++ +L +SSRLM+NFKKLES YFLTR R +K SG+ L RHS LSS+
Sbjct: 421 -------SQGSTLLESSRLMRNFKKLESVYFLTRRRQMKAAASGKSLTRHSPLSSENGRG 473
Query: 549 KPLVNERSSINNLGSKEGY--SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNS 606
+V+E+SS++N + + + ++ R+ GWI+PFLEGLC+YLSFS+LRVKADL QGDLLNS
Sbjct: 474 SMIVSEKSSVSNPVAPKAFFNNDSRQGGWIDPFLEGLCRYLSFSQLRVKADLKQGDLLNS 533
Query: 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNS 666
SNLVC+L+FDR+GELFA AGVNKKIK+FEC++I+N+NRDIHYPVVE+A RSKLSS+CWNS
Sbjct: 534 SNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVELAGRSKLSSLCWNS 593
Query: 667 YIKSQIASSNFEGVVQVGQV 686
YIKSQIASSNF+GVVQ+ V
Sbjct: 594 YIKSQIASSNFDGVVQIWDV 613
|
Repressor of photomorphogenesis in the light. Probably part of the COP1/SPA E3 ubiquitin-protein ligase complex. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q94BM7|SPA4_ARATH Protein SPA1-RELATED 4 OS=Arabidopsis thaliana GN=SPA4 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 615 bits (1587), Expect = e-175, Method: Compositional matrix adjust.
Identities = 366/678 (53%), Positives = 441/678 (65%), Gaps = 121/678 (17%)
Query: 15 MEGSSDSAWQDSDSSRALN-ISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTH 73
M+GSS+S SSR LN SGVS+ F G S H D V
Sbjct: 1 MKGSSES------SSRGLNNTSGVSE----------FCTDGSKS-----LSHIDYVRSLL 39
Query: 74 GDHLR-NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVE 132
G H N GGL D V A+E DVSLRQWLD P RSVD +EC H+FRQIVE
Sbjct: 40 GSHKEANLGGLDD--------DSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVE 91
Query: 133 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSS 192
IV AAHSQGIVVHNVRPSCFVMSSFN+VSFIESASCSDSGS +E T++ E
Sbjct: 92 IVNAAHSQGIVVHNVRPSCFVMSSFNNVSFIESASCSDSGS---DEDATTKSRE------ 142
Query: 193 PLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 252
+ ++ +IL R
Sbjct: 143 ----------------------------------------------IGSSRQEEILSERR 156
Query: 253 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGE 312
+ +Q E KKQPFPMKQIL ME +WY S EE G+ +CASDIYRLGVLLFELFCP S+ E
Sbjct: 157 SKQQEEVKKQPFPMKQILAMEMSWYTSHEEDNGSLCNCASDIYRLGVLLFELFCPVSSRE 216
Query: 313 EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 372
EK+RTMSSLRHRVLPPQ+LL +PKEASFCLWLLHPEPS RP M ELLQSEF+NEPR+++E
Sbjct: 217 EKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPRENLE 276
Query: 373 EREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKK 432
EREAA+ELR++I+E+ELLLEFL L+QQRKQE+A KLQD +S + SDI++V K+Q +L++K
Sbjct: 277 EREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQLVLQQK 336
Query: 433 GGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQK 492
G D + + SRKR R + EE +D+ +++
Sbjct: 337 G-------------------------RDVRSFLASRKRIRQGAETTAAEEENDDNSIDEE 371
Query: 493 HNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSG---RPLVR-HSQLSSDGRTS 548
L E +L +SSRLM+N KKLES YF TR R +K + +PL R +S LS +GR+S
Sbjct: 372 SKLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAATAAEKPLARYYSALSCNGRSS 431
Query: 549 KPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSN 608
E+SS++ SK+ ++ R+ GWI+PFLEGLCKYLSFSKLRVKADL QGDLLNSSN
Sbjct: 432 -----EKSSMSQ-PSKDPINDSRQGGWIDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSN 485
Query: 609 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI 668
LVC++ FDRDGE FA AGVNKKIK+FEC++II + RDIHYPVVE+ASRSKLS ICWNSYI
Sbjct: 486 LVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWNSYI 545
Query: 669 KSQIASSNFEGVVQVGQV 686
KSQ+ASSNFEGVVQV V
Sbjct: 546 KSQVASSNFEGVVQVWDV 563
|
Repressor of photomorphogenesis in the light. Probably part of the COP1/SPA E3 ubiquitin-protein ligase complex. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q9SYX2|SPA1_ARATH Protein SUPPRESSOR OF PHYA-105 1 OS=Arabidopsis thaliana GN=SPA1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 286 bits (731), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 203/594 (34%), Positives = 313/594 (52%), Gaps = 91/594 (15%)
Query: 105 VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIE 164
+SLR++L + L +FRQ+VE+V +AHS+ + + ++RPS F + + +I
Sbjct: 275 ISLREFLRSSYAKREKRHGLCLFRQLVELVDSAHSKRLFLLDLRPSLFTLVPSKKLRYIG 334
Query: 165 SASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224
+ +D SD E+ LN + ++ SS R ++ R+ DL L +P N L S
Sbjct: 335 NFGKNDLESDVDED-LNRRRPVVEESSSG------GRDSKKRKMDLHL-NSPGNQLQATS 386
Query: 225 C----MQSSSAYGTHVVLVEG-----MQEHKILDNRVNVEQVEEKKQPFPMKQILLMETN 275
+ S ++V +Q+ + N ++V V K+ +E
Sbjct: 387 TGRPFKRKSPVIDLNMVDARNPDSCELQQQDYIKN-LSVSSVSRKQS-----MSTWLEEQ 440
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFP 335
WY PEE+ G + S+IY LGVLLFEL C +GE M+ LRHR+LPP L K+P
Sbjct: 441 WYTCPEEINGEDIGEKSNIYALGVLLFELLCHCESGEMHAAMMADLRHRILPPTFLSKYP 500
Query: 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLL 395
KEA FCLWLLHPEPS RP ++L+SE + E DS++ AA E+ ELLL FL
Sbjct: 501 KEAGFCLWLLHPEPSSRPSARDILKSELICE-DDSVKSTAAAEEI------SELLLHFLS 553
Query: 396 LVQ-QRKQESAKKLQDIVSFICSDIEEV----SKQQAILRKKGGLGSFAELANDDLSGLN 450
++ Q+K++++K LQDI + + DI+E S +++R G + + +
Sbjct: 554 SLEVQKKKKASKLLQDIQT-LEDDIKEAERRYSSNVSLVRSHGAIEKRVQSS-------- 604
Query: 451 IPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLM 510
+D C+ S F P T N + RLM
Sbjct: 605 -----PLDEHCTT---SSALFVP----------------------TANTD-------RLM 627
Query: 511 KNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVN-ERSSINNLGSKEGYSE 569
N ++LE AYF R + + S ++ R+ K L + +R S N +++ ++
Sbjct: 628 SNIRQLEDAYFFMRSQ---------INLSSSAATARSDKTLKDRDRCSENQNENQDMSTK 678
Query: 570 GRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNK 629
G+ S + F EGLCK+ +SK + GDLLNS+++VCSLSFD D E AAAG++K
Sbjct: 679 GKSSDQLEVFFEGLCKFARYSKFETCGTIRSGDLLNSASVVCSLSFDPDEEHIAAAGISK 738
Query: 630 KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683
KIK+F+ +A +NE+ +HYP+VEM ++SKLS +CWNSYIK+ +AS++++GVVQ+
Sbjct: 739 KIKIFDFNAFMNESVGVHYPLVEMVNKSKLSCVCWNSYIKNYLASTDYDGVVQI 792
|
Controls normal photoperiodic flowering and regulates circadian rhythms. Required for suppression of photomorphogenesis in dark-grown seedlings and for normal elongation growth of adult plants. Integral component of the COP1/SPA E3 ubiquitin-protein ligase complex. Involved in HY5, HFR1, LAF1 and CO degradation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 7 EC: . EC: - EC: . EC: - |
| >sp|Q9T014|SPA2_ARATH Protein SPA1-RELATED 2 OS=Arabidopsis thaliana GN=SPA2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/333 (34%), Positives = 175/333 (52%), Gaps = 27/333 (8%)
Query: 105 VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIE 164
+SLR+WL ++ V+ EC++IFRQIV+ V +HSQG+V+ ++RPS F + N V ++
Sbjct: 301 LSLREWLKSERQEVNKAECMYIFRQIVDHVDCSHSQGVVLCDLRPSSFKIFKENAVKYV- 359
Query: 165 SASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224
S S +S + +N + + L +PL R R D ++ P +
Sbjct: 360 ---VSGSQRESFDSNMNKETL--SQLENPL--------VRRRLGDTSSLSIPAKKQKSSG 406
Query: 225 -------CMQSSSAYGTHVVLVEG-MQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 276
Q + +G +QE ++ + V PF L E W
Sbjct: 407 PSSRQWPMFQRAGGVNIQTENNDGAIQEFHFRSSQPHCSTV---ACPFTSVSEQL-EEKW 462
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPK 336
YASPEEL G S +S+IY LG+LL+EL F + MS +RHR+LPP+ L + PK
Sbjct: 463 YASPEELRGDMRSASSNIYSLGILLYELLSQFQCERAREAAMSDIRHRILPPKFLSENPK 522
Query: 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLL 396
EA FCLWLLHPE S RP ++LQSE +N D E ++ + ++ E ELL FL L
Sbjct: 523 EAGFCLWLLHPESSCRPSTRDILQSEVVNGIPDLYAE-GLSLSIEQEDTESELLQHFLFL 581
Query: 397 VQQRKQESAKKLQDIVSFICSDIEEVSKQQAIL 429
Q+++Q+ A L + ++ + +DIEE+ K++ +
Sbjct: 582 SQEKRQKHAGNLMEEIASVEADIEEIVKRRCAI 614
|
Involved in suppression of photomorphogenesis in dark-grown seedlings. Probably part of the COP1/SPA E3 ubiquitin-protein ligase complex. Arabidopsis thaliana (taxid: 3702) |
| >sp|P93471|COP1_PEA E3 ubiquitin-protein ligase COP1 OS=Pisum sativum GN=COP1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 167/331 (50%), Gaps = 54/331 (16%)
Query: 371 MEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQA--- 427
ME+ EA + ++LL+FL ++++K + K++Q + FI DI V K +
Sbjct: 150 MEQEEAERNM-------QILLDFLHCLRKQKVDELKEVQTDLQFIKEDIGAVEKHRMDLY 202
Query: 428 -----------ILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQ 476
+L GG S + + SGL LN+ S + + + ++
Sbjct: 203 RARDRYSVKLRMLDDSGGRKSRHSSMDLNSSGLASSPLNLRGGLSSGSHTKKNDGKSQIS 262
Query: 477 LH-HLEECDDNL--DDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPV-KPSG 532
H H + D + D+Q N +G +L + R+ F L+ Y R + KP G
Sbjct: 263 SHGHGIQRRDPITGSDSQYINQSG---LALVRKKRVHTQFNDLQECYLQKRRQAADKPHG 319
Query: 533 RPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKL 592
+ ER + N S+EGYS G ++ F L + +S+L
Sbjct: 320 Q-------------------QERDT--NFISREGYSCG-----LDDFQSVLTTFTRYSRL 353
Query: 593 RVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 652
RV A++ GD+ +S+N+V S+ FDRD +LFA AGV+++IKVF+ A++NE D H PVVE
Sbjct: 354 RVIAEIRHGDIFHSANIVSSIEFDRDDDLFATAGVSRRIKVFDFSAVVNEPTDAHCPVVE 413
Query: 653 MASRSKLSSICWNSYIKSQIASSNFEGVVQV 683
M +RSKLS + WN Y K+QIASS++EG+V V
Sbjct: 414 MTTRSKLSCLSWNKYAKNQIASSDYEGIVTV 444
|
E3 ubiquitin-protein ligase that acts as a repressor of photomorphogenesis and as an activator of etiolation in darkness. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Represses photomorphogenesis in darkness by mediating ubiquitination and subsequent proteasomal degradation of light-induced transcription factors. Light stimuli abrogate the repression of photomorphogenesis, possibly due to its localization to the cytoplasm. Could play a role in switching between skotomorphogenetic and photomorphogenetic pathways. Pisum sativum (taxid: 3888) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|P43254|COP1_ARATH E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana GN=COP1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 170/331 (51%), Gaps = 43/331 (12%)
Query: 371 MEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQA-IL 429
+ ER+ +E E ++LL+FL ++++K + ++Q + +I DI V + + +
Sbjct: 148 LAERKRKMEQEEAERNMQILLDFLHCLRKQKVDELNEVQTDLQYIKEDINAVERHRIDLY 207
Query: 430 RKKGGLGSFAELANDDLS------------GLNIPSLNIIDNDCSATMGSRK-RFRPELQ 476
R + + DD S G N SL+I + ++K + +
Sbjct: 208 RARDRYSVKLRMLGDDPSTRNAWPHEKNQIGFNSNSLSIRGGNFVGNYQNKKVEGKAQGS 267
Query: 477 LHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYF-LTRCRPVKPSGRPL 535
H L +K L+G++ +SL +S+ M K++ + + L C L
Sbjct: 268 SHGLP---------KKDALSGSDSQSLNQSTVSMARKKRIHAQFNDLQECY--------L 310
Query: 536 VRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVK 595
+ QL+ + + N++S + +EGYS G + F L + +S+LRV
Sbjct: 311 QKRRQLADQPNSKQE--NDKSVVR----REGYSNG-----LADFQSVLTTFTRYSRLRVI 359
Query: 596 ADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 655
A++ GD+ +S+N+V S+ FDRD ELFA AGV++ IKVF+ +++NE D+ P+VEM++
Sbjct: 360 AEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMST 419
Query: 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686
RSKLS + WN + K+ IASS++EG+V V V
Sbjct: 420 RSKLSCLSWNKHEKNHIASSDYEGIVTVWDV 450
|
E3 ubiquitin-protein ligase that acts as a repressor of photomorphogenesis and as an activator of etiolation in darkness. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Represses photomorphogenesis in darkness by mediating ubiquitination and subsequent proteasomal degradation of light-induced transcription factors such as HY5, HYH and LAF1. Down-regulates MYB21, probably via ubiquitination process. Light stimuli abrogate the repression of photomorphogenesis, possibly due to its localization to the cytoplasm. Could play a role in switching between skotomorphogenetic and photomorphogenetic pathways. Arabidopsis thaliana (taxid: 3702) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|Q8NHY2|RFWD2_HUMAN E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens GN=RFWD2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 103 bits (257), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 140/310 (45%), Gaps = 62/310 (20%)
Query: 373 EREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKK 432
+++ +E + ++L+EFL + ++ K+E +++Q +S + DI+ V +
Sbjct: 247 QKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS------ 300
Query: 433 GGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQK 492
G ++ ++ D +P S+ + S + +P
Sbjct: 301 ---GLYSPVSEDS----TVPQFEAPSPSHSSIIDSTEYSQPPGF-----SGSSQTKKQPW 348
Query: 493 HNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLV 552
+N T R RL +F+ LE YF TR S++S D RT+ L
Sbjct: 349 YNSTLASRRK-----RLTAHFEDLEQCYFSTR-------------MSRISDDSRTASQL- 389
Query: 553 NERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DLLNSSNLVC 611
+ F E L K+ ++ +R A L+ DL N S++V
Sbjct: 390 ------------------------DEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVS 425
Query: 612 SLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ 671
S+ FDRD + FA AGV KKIKV+E D +I + DIHYP EM SK+S I W+SY K+
Sbjct: 426 SIEFDRDCDYFAIAGVTKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNL 485
Query: 672 IASSNFEGVV 681
+ASS++EG V
Sbjct: 486 LASSDYEGTV 495
|
E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Involved in JUN ubiquitination and degradation. Directly involved in p53 (TP53) ubiquitination and degradation, thereby abolishing p53-dependent transcription and apoptosis. Ubiquitinates p53 independently of MDM2 or RCHY1. Probably mediates E3 ubiquitin ligase activity by functioning as the essential RING domain subunit of larger E3 complexes. In contrast, it does not constitute the catalytic RING subunit in the DCX DET1-COP1 complex that negatively regulates JUN, the ubiquitin ligase activity being mediated by RBX1. Homo sapiens (taxid: 9606) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|Q9R1A8|RFWD2_MOUSE E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus GN=Rfwd2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 100 bits (248), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 140/310 (45%), Gaps = 62/310 (20%)
Query: 373 EREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKK 432
+++ +E + ++L+EFL + ++ K+E +++Q +S + DI+ V +
Sbjct: 249 QKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS------ 302
Query: 433 GGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQK 492
G ++ ++ D +P S+ + S + +P +K
Sbjct: 303 ---GLYSPVSEDS----TVPQFEAPSPSHSSIIDSTEYSQPP--------GFSGTSQTKK 347
Query: 493 HNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLV 552
+ S + RL +F+ LE YF TR S++S D RT+ L
Sbjct: 348 QPWYNSTLAS--RRKRLTAHFEDLEQCYFSTR-------------MSRISDDSRTASQL- 391
Query: 553 NERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DLLNSSNLVC 611
+ F E L K+ ++ +R A L+ DL N S++V
Sbjct: 392 ------------------------DEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVS 427
Query: 612 SLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ 671
S+ FDRD + FA AGV KKIKV+E +I + DIHYP EM SK+S I W+SY K+
Sbjct: 428 SIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNL 487
Query: 672 IASSNFEGVV 681
+ASS++EG V
Sbjct: 488 LASSDYEGTV 497
|
E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Involved in JUN ubiquitination and degradation. Directly involved in p53 (TP53) ubiquitination and degradation, thereby abolishing p53-dependent transcription and apoptosis. Ubiquitinates p53 independently of MDM2 or RCHY1. Probably mediates E3 ubiquitin ligase activity by functioning as the essential RING domain subunit of larger E3 complexes. In contrast, it does not constitute the catalytic RING subunit in the DCX DET1-COP1 complex that negatively regulates JUN, the ubiquitin ligase activity being mediated by RBX1. Mus musculus (taxid: 10090) EC: 6 EC: . EC: 3 EC: . EC: 2 EC: . EC: - |
| >sp|Q9Z1Z1|E2AK3_RAT Eukaryotic translation initiation factor 2-alpha kinase 3 OS=Rattus norvegicus GN=Eif2ak3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 89/241 (36%), Gaps = 82/241 (34%)
Query: 123 CLHIFRQIVEIVYAAHSQGIVVHNVRPS--CFVMSSFNHVSFIESASCSDSGSDSHEEGL 180
CLHIF QI E V HS+G++ +++PS F M V
Sbjct: 906 CLHIFLQIAEAVQFLHSKGLMHRDLKPSNIFFTMDDVVKVG------------------- 946
Query: 181 NTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVE 240
D LVTA D E + + AY TH V
Sbjct: 947 ----------------------------DFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 978
Query: 241 GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300
T Y SPE++ G S DI+ LG++
Sbjct: 979 ---------------------------------TKLYMSPEQIHGNNYSHKVDIFSLGLI 1005
Query: 301 LFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
LFEL PFST E+ RT++ +R+ PP K+P+E +L P P RP+ ++++
Sbjct: 1006 LFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPQEHMMVQDMLSPSPMERPEATDIIE 1065
Query: 361 S 361
+
Sbjct: 1066 N 1066
|
Phosphorylates the alpha subunit of eukaryotic translation-initiation factor 2 (EIF2), leading to its inactivation and thus to a rapid reduction of translational initiation and repression of global protein synthesis. Serves as a critical effector of unfolded protein response (UPR)-induced G1 growth arrest due to the loss of cyclin-D1 (CCND1). Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9NZJ5|E2AK3_HUMAN Eukaryotic translation initiation factor 2-alpha kinase 3 OS=Homo sapiens GN=EIF2AK3 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 86/241 (35%), Gaps = 82/241 (34%)
Query: 123 CLHIFRQIVEIVYAAHSQGIVVHNVRPS--CFVMSSFNHVSFIESASCSDSGSDSHEEGL 180
CLHIF QI E V HS+G++ +++PS F M V
Sbjct: 914 CLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVG------------------- 954
Query: 181 NTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVE 240
D LVTA D E + + AY H V
Sbjct: 955 ----------------------------DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVG 986
Query: 241 GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300
T Y SPE++ G S DI+ LG++
Sbjct: 987 ---------------------------------TKLYMSPEQIHGNSYSHKVDIFSLGLI 1013
Query: 301 LFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
LFEL PFST E+ RT++ +R+ PP K+P E +L P P RP+ +++
Sbjct: 1014 LFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 1073
Query: 361 S 361
+
Sbjct: 1074 N 1074
|
Phosphorylates the alpha subunit of eukaryotic translation-initiation factor 2 (EIF2), leading to its inactivation and thus to a rapid reduction of translational initiation and repression of global protein synthesis. Serves as a critical effector of unfolded protein response (UPR)-induced G1 growth arrest due to the loss of cyclin-D1 (CCND1). Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 720 | ||||||
| 255585740 | 889 | ubiquitin ligase protein cop1, putative | 0.912 | 0.739 | 0.689 | 0.0 | |
| 359493656 | 903 | PREDICTED: protein SPA1-RELATED 3-like [ | 0.923 | 0.736 | 0.669 | 0.0 | |
| 356542282 | 892 | PREDICTED: protein SPA1-RELATED 3-like [ | 0.913 | 0.737 | 0.661 | 0.0 | |
| 356546870 | 892 | PREDICTED: protein SPA1-RELATED 3-like [ | 0.908 | 0.733 | 0.661 | 0.0 | |
| 224114936 | 851 | predicted protein [Populus trichocarpa] | 0.868 | 0.734 | 0.651 | 0.0 | |
| 357452949 | 875 | SPA1-like protein [Medicago truncatula] | 0.884 | 0.728 | 0.631 | 0.0 | |
| 224128308 | 857 | predicted protein [Populus trichocarpa] | 0.865 | 0.726 | 0.650 | 0.0 | |
| 357519507 | 814 | SPA1-like protein [Medicago truncatula] | 0.884 | 0.782 | 0.618 | 0.0 | |
| 449446929 | 850 | PREDICTED: protein SPA1-RELATED 3-like [ | 0.833 | 0.705 | 0.670 | 0.0 | |
| 22331100 | 837 | ubiquitin-protein ligase RFWD2 [Arabidop | 0.840 | 0.722 | 0.570 | 0.0 |
| >gi|255585740|ref|XP_002533551.1| ubiquitin ligase protein cop1, putative [Ricinus communis] gi|223526576|gb|EEF28831.1| ubiquitin ligase protein cop1, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 909 bits (2348), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/673 (68%), Positives = 546/673 (81%), Gaps = 16/673 (2%)
Query: 15 MEGSSDSAWQDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHG 74
M+ S+SAWQ S++S ALN S SD NP G S D RK +D V L H
Sbjct: 1 MKDLSESAWQKSNNSGALNTSRASDWNP-----------GPLSRDSVFRKKTDRVVLAHH 49
Query: 75 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIV 134
+ L+NQ GLSG ++E A+DPF AIEWGDVSLRQWLDKP+RSVD +ECLHIFRQIV IV
Sbjct: 50 N-LKNQVGLSGGYKDEVAVDPFARAIEWGDVSLRQWLDKPERSVDEFECLHIFRQIVGIV 108
Query: 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 194
AHSQGIVVHNVRPSCFVM+SFNHVSFIESASCSDSGSDS E+GLN++ +E K+ SS L
Sbjct: 109 NLAHSQGIVVHNVRPSCFVMTSFNHVSFIESASCSDSGSDSLEDGLNSRTLEVKNPSSLL 168
Query: 195 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNV 254
P D+ Q RTRLR ED Q + P N LSEASC+QSSS + THV + E +E K D +
Sbjct: 169 PNDIFQLRTRLRSEDFQPASTPINALSEASCIQSSSVHATHVPVGENTEEDKANDRTIIE 228
Query: 255 EQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEK 314
++ EE+KQPFPMKQILLMET+WY SPEE G+P SCASDIYRLGVLLFELFCPFS+ E+K
Sbjct: 229 QEEEERKQPFPMKQILLMETSWYTSPEEATGSPSSCASDIYRLGVLLFELFCPFSSREDK 288
Query: 315 TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 374
+RTMSSLRHRVLPPQLLLK+PKEASFCLWLLHPEPS RPKM ELLQSEFLNEPR+++EER
Sbjct: 289 SRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPEPSSRPKMCELLQSEFLNEPRENLEER 348
Query: 375 EAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGG 434
EAAI+L E+I+E++LLL+FLLL+QQRKQE+A KLQD VS +CSDIEEV K + L+KKG
Sbjct: 349 EAAIQLSERIEEQDLLLDFLLLIQQRKQEAADKLQDTVSLLCSDIEEVLKHRTFLKKKG- 407
Query: 435 LGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHN 494
GS E DD N+P +I+DND S+++GSRKRFRP +Q+ ++EE DDN DD Q +
Sbjct: 408 -GSCLERMKDDNLVSNLPPFSIVDNDDSSSLGSRKRFRPGIQIFNMEEFDDNRDDAQHSD 466
Query: 495 L-TGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVN 553
+ T +++ L KSSRLMKNFKKLESAYFLTRCRP++ SG+P +R+S +SSDGR S +V+
Sbjct: 467 MVTESQDSLLLKSSRLMKNFKKLESAYFLTRCRPIRSSGKPFIRYSPISSDGRGST-VVS 525
Query: 554 ERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSL 613
ERSSINNL KE + E R+SGWI+PFLEGLCKYLSF+KL++KADL QGDLLNSSNLVCSL
Sbjct: 526 ERSSINNLAPKEQHVESRQSGWISPFLEGLCKYLSFNKLKIKADLKQGDLLNSSNLVCSL 585
Query: 614 SFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA 673
SFDRDGE FA AGVNKKIK+FECDAIINENRDIHYPVVE+A+RSKLSS+CWNSYIKSQIA
Sbjct: 586 SFDRDGEFFATAGVNKKIKIFECDAIINENRDIHYPVVEIATRSKLSSVCWNSYIKSQIA 645
Query: 674 SSNFEGVVQVGQV 686
SSNFEGVVQV +
Sbjct: 646 SSNFEGVVQVWDI 658
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|359493656|ref|XP_002282441.2| PREDICTED: protein SPA1-RELATED 3-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 848 bits (2190), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/681 (66%), Positives = 531/681 (77%), Gaps = 16/681 (2%)
Query: 15 MEGSSDSAWQDSDSSRALNISGVS-DRNPRLLRGERFGVRGDDSND---FELRKHSDGVE 70
MEGSS+S W++SD SR LN+S VS RNPR R G+ G S+D RK D V
Sbjct: 1 MEGSSESGWRNSDISRGLNVSIVSHGRNPRQRHANRIGLSGGASHDSGFISGRKERDHVL 60
Query: 71 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQI 130
+H + +NQ G+S VC+++ A+DPFV AIEWGDVSLR WLDKP+R VD ECLHIF QI
Sbjct: 61 SSHTKNHKNQVGISQVCDDDVALDPFVRAIEWGDVSLRHWLDKPERRVDALECLHIFTQI 120
Query: 131 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDL 190
EIV AAHSQG+VV+NVRPSCFVMSSFNHVSFIES SCSDSGSDS E+G N+ E L
Sbjct: 121 AEIVNAAHSQGVVVNNVRPSCFVMSSFNHVSFIESVSCSDSGSDSLEDGSNSHTEEDNGL 180
Query: 191 SSPLPLDMLQRRTRLRREDLQLVTAPTND----LSEASCMQSSSAYGTHVVLVEGMQEHK 246
SS LP D+ R++R ED PTN LSE SCMQSSS THV LVE +E+K
Sbjct: 181 SS-LPDDLHLRKSRSGNEDFLPTIMPTNASQIVLSETSCMQSSSVSATHVTLVEDREEYK 239
Query: 247 ILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 306
D R +VEQ EEKKQ FPMK+ILLMETNWY SPEE++GA SCASDIY+LGVLLFELFC
Sbjct: 240 STDRR-SVEQSEEKKQTFPMKEILLMETNWYTSPEEISGAQTSCASDIYQLGVLLFELFC 298
Query: 307 PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366
FS+ EEK+RTMS LRHRVLPPQLLLK+PKEASFCLWLLHPEPS RPK+ EL QSEFL E
Sbjct: 299 TFSSREEKSRTMSCLRHRVLPPQLLLKWPKEASFCLWLLHPEPSSRPKISELFQSEFLTE 358
Query: 367 PRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQ 426
PRD MEEREAAIELRE+I+E+ELLLEFLLL+QQRKQ + KLQD +SF+ SDIEEV KQQ
Sbjct: 359 PRDKMEEREAAIELRERIEEQELLLEFLLLMQQRKQGAVDKLQDTISFLSSDIEEVGKQQ 418
Query: 427 AILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDN 486
A LRK+G GS+ EL DD S ++ +++ +N+ S ++ S KRFR +HH++E DD
Sbjct: 419 ATLRKRG--GSYQELVKDDQSTSDLSPMDVDENEDSTSVRSSKRFRQ--GVHHIKELDDT 474
Query: 487 LDDNQKHNLTG-NEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDG 545
L++ QK + N E + KSSRLMKNFKKLESAY LTR +P KPSG+P + S SS+G
Sbjct: 475 LNNGQKLGMNAENPEILISKSSRLMKNFKKLESAYLLTRRKPTKPSGKPSNKISPPSSNG 534
Query: 546 RTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLN 605
R S +V ERSS+NNL SK+ Y+E +SGWINPFL+GLCKYLSFSKL+VKADL QGDLLN
Sbjct: 535 RGS-IVVTERSSVNNLASKDQYNEHGQSGWINPFLDGLCKYLSFSKLKVKADLKQGDLLN 593
Query: 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWN 665
SSNLVCS+SFDRDGELFA AGVNKKIKVFEC++I+NE+RDIHYP+VEMA RSKLSSICWN
Sbjct: 594 SSNLVCSVSFDRDGELFATAGVNKKIKVFECNSILNEDRDIHYPLVEMACRSKLSSICWN 653
Query: 666 SYIKSQIASSNFEGVVQVGQV 686
SYIKSQIASSNFEGVVQV V
Sbjct: 654 SYIKSQIASSNFEGVVQVWDV 674
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356542282|ref|XP_003539598.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 832 bits (2148), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/674 (66%), Positives = 524/674 (77%), Gaps = 16/674 (2%)
Query: 15 MEGSSDSAWQDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHG 74
MEGSS SA+ +S SSRALN SGVSDRN R+ +R G+ S D RK D V L G
Sbjct: 1 MEGSSGSAFHNSGSSRALNSSGVSDRNQRVHCPQRNPFSGEASQDSGFRKERDRVLLAQG 60
Query: 75 DHLRN-QGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEI 133
+N GG SG+CE+E +DPF A+EWGD+SLRQWLDKP+RSVD +ECLHIFRQIVEI
Sbjct: 61 GQPKNLGGGFSGLCEDEVEVDPFFCAVEWGDISLRQWLDKPERSVDAFECLHIFRQIVEI 120
Query: 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSP 193
V AHSQG+VVHNVRPSCFVMSSFNH+SFIESASCSD+GSDS +G+N Q E K +S
Sbjct: 121 VSVAHSQGVVVHNVRPSCFVMSSFNHISFIESASCSDTGSDSLGDGMNNQGGEVKTPTSL 180
Query: 194 LPLDMLQRRTRLRRED-LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 252
P DM Q+ L ED + + T+ T S++SCM SS+ Y L+E +E+K+ D R
Sbjct: 181 CPHDMHQQS--LGSEDFMPIKTSTTPARSDSSCMLSSAVYAARASLIEETEENKMKDRRK 238
Query: 253 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGE 312
+ E+VE KKQ FPMKQILLME +WY SPEE AG SCASD+YRLGVLLFELFCP S+ E
Sbjct: 239 D-EEVEGKKQSFPMKQILLMEMSWYTSPEEGAGESSSCASDVYRLGVLLFELFCPLSSRE 297
Query: 313 EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 372
EK+RTMSSLRHRVLPPQLLLK+PKEASFCLWLLHP+P RP +GELLQSEFLNE RD E
Sbjct: 298 EKSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPDPKSRPTLGELLQSEFLNEQRDDTE 357
Query: 373 EREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKK 432
EREAAIELR++I+++ELLLEFLLL+QQRKQE A+KLQ VSF+CSDIEEV+KQ ++
Sbjct: 358 EREAAIELRQRIEDQELLLEFLLLLQQRKQEVAEKLQHTVSFLCSDIEEVTKQHVRFKEI 417
Query: 433 GGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQK 492
G AEL +D+ S + PS+ +D++ SA +G+RKR R + + ++EECDD++ D+QK
Sbjct: 418 TG----AELGSDERSASSFPSMTFVDSEDSAFLGTRKRVRLGMDVKNIEECDDDVGDDQK 473
Query: 493 HNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLV 552
N + L KSSRLMKNFKKLESAYFLTRCRP SG+ VRH ++SDGR S +V
Sbjct: 474 SNGS-----FLSKSSRLMKNFKKLESAYFLTRCRPAYSSGKLAVRHPPVTSDGRGSV-VV 527
Query: 553 NERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCS 612
ERS IN+L SKE EG S WINPFLEGLCKYLSFSKL+VKADL QGDLL+SSNLVCS
Sbjct: 528 TERSCINDLKSKEQCREG-ASAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCS 586
Query: 613 LSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI 672
LSFDRDGE FA AGVNKKIKVFECD+IINE+RDIHYPVVEMASRSKLSSICWN+YIKSQI
Sbjct: 587 LSFDRDGEFFATAGVNKKIKVFECDSIINEDRDIHYPVVEMASRSKLSSICWNTYIKSQI 646
Query: 673 ASSNFEGVVQVGQV 686
ASSNFEGVVQ+ V
Sbjct: 647 ASSNFEGVVQLWDV 660
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356546870|ref|XP_003541845.1| PREDICTED: protein SPA1-RELATED 3-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 826 bits (2134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/670 (66%), Positives = 520/670 (77%), Gaps = 16/670 (2%)
Query: 19 SDSAWQDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLR 78
S SA+Q+S SSRALN SGVSDRN R+ +R G+ S D RK D L G +
Sbjct: 6 SGSAFQNSGSSRALNSSGVSDRNQRVHCPQRNPFLGEASQDSGFRKERDRFLLAQGGQPK 65
Query: 79 N-QGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA 137
N GG SG+CE+E +DPF A+EWGD+SLRQWLDKP+RSV +ECLHIFRQIVEIV A
Sbjct: 66 NLGGGFSGLCEDEVEVDPFFCAVEWGDISLRQWLDKPERSVGAFECLHIFRQIVEIVSVA 125
Query: 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 197
HSQG+VVHNVRPSCFVMSSFNH+SFIESASCSD+GSDS EGLN Q E K +S P D
Sbjct: 126 HSQGVVVHNVRPSCFVMSSFNHISFIESASCSDTGSDSLGEGLNNQGGEVKTPTSLCPHD 185
Query: 198 MLQRRTRLRREDLQLV-TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQ 256
M Q+ + ED V T T S++SCM SS+ Y L+E +E+K+ D R + ++
Sbjct: 186 MPQQS--MGSEDFMPVKTLTTPAQSDSSCMLSSAVYAARASLIEETEENKMKDRRKD-DE 242
Query: 257 VEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTR 316
VE KKQ FPMKQILLME +WY SPEE AG SCASD+YRLGVLLFELFCP S+ EEK+R
Sbjct: 243 VEGKKQSFPMKQILLMEMSWYTSPEEGAGESSSCASDVYRLGVLLFELFCPLSSREEKSR 302
Query: 317 TMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREA 376
TMSSLRHRVLPPQLLLK+PKEASFCLWLLHP+PSGRP +GELLQS+FLNE RD MEEREA
Sbjct: 303 TMSSLRHRVLPPQLLLKWPKEASFCLWLLHPDPSGRPTLGELLQSDFLNEQRDDMEEREA 362
Query: 377 AIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGGLG 436
AIELR++ID++ELLLEFLLL+QQRKQE A+KLQ VSF+CSDIEEV+KQ ++ G
Sbjct: 363 AIELRQRIDDQELLLEFLLLLQQRKQEVAEKLQHTVSFLCSDIEEVTKQHVRFKEITG-- 420
Query: 437 SFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHNLT 496
AEL +D+ S + PS+ ++D++ SA +G+RKR R + + ++EEC D++ D+QK N +
Sbjct: 421 --AELGSDEHSASSFPSMTVVDSEGSAFLGTRKRVRLGMDVKNIEECVDDVGDDQKSNGS 478
Query: 497 GNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERS 556
L KSSRLMKNFKKLESAYFLTRCRP SG+ VRH ++SDGR S ++ ERS
Sbjct: 479 -----FLSKSSRLMKNFKKLESAYFLTRCRPAYSSGKLAVRHPPVTSDGRGSV-VMTERS 532
Query: 557 SINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFD 616
IN+L SKE EG S WINPFLEGLCKYLSFSKL+VKADL QGDLL+SSNLVCSLSFD
Sbjct: 533 CINDLKSKEQCREG-ASAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFD 591
Query: 617 RDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN 676
RDGE FA AGVNKKIKVFECD+IINE+RDIHYPVVEMASRSKLSSICWN+YIKSQIASSN
Sbjct: 592 RDGEFFATAGVNKKIKVFECDSIINEDRDIHYPVVEMASRSKLSSICWNTYIKSQIASSN 651
Query: 677 FEGVVQVGQV 686
FEGVVQ+ V
Sbjct: 652 FEGVVQLWDV 661
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224114936|ref|XP_002316897.1| predicted protein [Populus trichocarpa] gi|222859962|gb|EEE97509.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/675 (65%), Positives = 521/675 (77%), Gaps = 50/675 (7%)
Query: 15 MEGSSDSAWQDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHG 74
MEGSS+SAWQ SDS R N S VS+RN +R N ++ +D V L
Sbjct: 1 MEGSSESAWQKSDSHREFNTSVVSNRN----------LRSTSHNSGFRKERTDRVVLAR- 49
Query: 75 DHLRNQGG-LSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEI 133
+L+NQ G LSGVCE+EAA+D F+ IEW DVSLR WLDKP+RSV+ +EC HIFRQ+VE+
Sbjct: 50 QNLKNQAGTLSGVCEDEAAVDRFMQTIEWNDVSLRHWLDKPQRSVNEFECSHIFRQVVEV 109
Query: 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSP 193
V AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDS ++GLN++ ME K+ SS
Sbjct: 110 VNVAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSLDDGLNSETMEVKNSSSS 169
Query: 194 LPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVN 253
LP DM Q+R +V LVE +EHK+ D R N
Sbjct: 170 LPHDMCQQR--------------------------------NVPLVEETEEHKVHDMR-N 196
Query: 254 VEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEE 313
VE EE+KQPFPMKQILLME+ WY SPEE AG+P SCASDIYRLGVLLFELFCPF++ E+
Sbjct: 197 VEHEEERKQPFPMKQILLMESCWYTSPEEDAGSPSSCASDIYRLGVLLFELFCPFTSSED 256
Query: 314 KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEE 373
K+RTMSSLRHRVLPPQLLLK+ KEASFCLWLLHPEPS RPK+GELLQS+FLNEP +++EE
Sbjct: 257 KSRTMSSLRHRVLPPQLLLKWSKEASFCLWLLHPEPSSRPKIGELLQSDFLNEPINNLEE 316
Query: 374 REAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKG 433
EAA +LRE+I+E+ELLLEFLLL+QQRKQ++A KLQD +S +CSDIEEV+K Q L+KKG
Sbjct: 317 LEAATQLRERIEEQELLLEFLLLIQQRKQDAADKLQDTISLLCSDIEEVTKHQVFLKKKG 376
Query: 434 GLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKH 493
+ E D NIP+LN++D D S+++GSRKRF P L++H++E+CDDNLD++Q
Sbjct: 377 --DTCKERGEGDHLTSNIPALNVVDIDDSSSLGSRKRFCPGLEIHNVEKCDDNLDESQNS 434
Query: 494 N-LTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRP-LVRHSQLSSDGRTSKPL 551
+ ++E LF+SSRLMKNFKKLESAYFLTRCRPV+P G+P R+ + SDGR S +
Sbjct: 435 DTFVESQESPLFRSSRLMKNFKKLESAYFLTRCRPVRPPGKPSFARNLPVISDGRISI-V 493
Query: 552 VNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVC 611
ERSSIN++ K+ ++EGRRSGWI+PFLEGLCKYLSFSKL+VKADL QGDLLNSSNLVC
Sbjct: 494 ATERSSINSIAPKQQFTEGRRSGWISPFLEGLCKYLSFSKLKVKADLKQGDLLNSSNLVC 553
Query: 612 SLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ 671
S+SFDRDGE FA AGVNKKIKVFECD IINE RDIHYPVVEM RSKLSSICWNSYIKSQ
Sbjct: 554 SISFDRDGEFFATAGVNKKIKVFECDTIINEARDIHYPVVEMVCRSKLSSICWNSYIKSQ 613
Query: 672 IASSNFEGVVQVGQV 686
+ASSNFEGVVQV V
Sbjct: 614 LASSNFEGVVQVWDV 628
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357452949|ref|XP_003596751.1| SPA1-like protein [Medicago truncatula] gi|355485799|gb|AES67002.1| SPA1-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/668 (63%), Positives = 507/668 (75%), Gaps = 31/668 (4%)
Query: 24 QDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGL 83
++S+SSRALN SGVSDRN R G+ S D RK D + GD +N GG
Sbjct: 3 ENSESSRALNSSGVSDRNQR-----ENPFSGEGSQDSRFRKERDWIHGAQGDQNKNLGGF 57
Query: 84 SGVCENEAA-IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142
CE E DPF ++EWGD+SLRQWLDKP RSVD +ECLHIFRQIVEIV AAH QG+
Sbjct: 58 ---CEGEEVENDPFFSSVEWGDISLRQWLDKPDRSVDFFECLHIFRQIVEIVNAAHCQGV 114
Query: 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNT-QNMETKDLSSPLPLDMLQR 201
VVHNVRPSCFVMSSFNH+SFIESASCSD+ SDS +G+N Q +E K +S P D++ +
Sbjct: 115 VVHNVRPSCFVMSSFNHISFIESASCSDTSSDSLGDGVNNDQGVEVKTPTSHCPRDIMHQ 174
Query: 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKK 261
++ ED T+ S++SCM SS+ Y L+E +E+K+ D R + E+VE KK
Sbjct: 175 QS-FGSEDFMPAKISTDARSDSSCMLSSAVYAARASLIEETEENKMKDMRKD-EEVEGKK 232
Query: 262 QPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSL 321
Q FPMKQILLME +WY SPEE+AG P SCASD+YRLG+LLFELFCP S+ EEK+RTMSSL
Sbjct: 233 QSFPMKQILLMEMSWYTSPEEVAGTPSSCASDVYRLGILLFELFCPLSSREEKSRTMSSL 292
Query: 322 RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELR 381
RHRVLPPQLLLK+PKEASFCLWLLHP+PS RP +GELLQSEFLNE RD MEEREAAIELR
Sbjct: 293 RHRVLPPQLLLKWPKEASFCLWLLHPDPSSRPTLGELLQSEFLNEQRDDMEEREAAIELR 352
Query: 382 EQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGGLGSFAEL 441
++I++EELLLEFL L++QRKQE A+KLQ +SF+CSDIEEV+K+Q ++ G+ EL
Sbjct: 353 QKIEDEELLLEFLSLLKQRKQEVAEKLQHTISFLCSDIEEVTKKQTRFKEIAGV----EL 408
Query: 442 -ANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHNLTGNEE 500
+DD S PS+ +ID++ SA +G+RKR R + HL+ECDDN++ +QK N
Sbjct: 409 GGSDDRSASTFPSMTVIDSEDSACLGTRKRVRLGM---HLDECDDNMESDQK-----NHG 460
Query: 501 RSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINN 560
L K+SRLMKNFKKLESAYFLTRC+P SGRP VRHS +++ GR S +++ERS IN+
Sbjct: 461 SFLSKNSRLMKNFKKLESAYFLTRCKPTYSSGRPGVRHSTIANGGRGS-VVMSERSCINS 519
Query: 561 LGSKEGYSEGR--RSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRD 618
L K+ +GR S WINPFLEGLCKYLSFSKL+VKADL QGDLL+SSNLVCSLSFDRD
Sbjct: 520 LALKD---QGRDSASAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSFDRD 576
Query: 619 GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE 678
GE FA AGVNKKIK+FECD II +RDIHYPVVEMA RSKLSS+CWN+YIKSQIASSNFE
Sbjct: 577 GEFFATAGVNKKIKIFECDTIIKGDRDIHYPVVEMACRSKLSSLCWNTYIKSQIASSNFE 636
Query: 679 GVVQVGQV 686
GVVQ+ V
Sbjct: 637 GVVQLWDV 644
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224128308|ref|XP_002329131.1| predicted protein [Populus trichocarpa] gi|222869800|gb|EEF06931.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 782 bits (2019), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 439/675 (65%), Positives = 511/675 (75%), Gaps = 52/675 (7%)
Query: 15 MEGSSDSAWQDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHG 74
MEGSS+SAWQ S S R N S V++RN R S + RK +D V L
Sbjct: 1 MEGSSESAWQKSGSYRGFNTSVVTNRNLR-----------SASYNSGFRKETDRVVLAR- 48
Query: 75 DHLRNQGG-LSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEI 133
+L+NQ G LSGVCE+EAA+D FV +EW DVSLR WL+KP+RSVD +ECLHIFRQIVEI
Sbjct: 49 QNLKNQAGTLSGVCEDEAAVDHFVQNMEWNDVSLRHWLNKPERSVDEFECLHIFRQIVEI 108
Query: 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSP 193
V AHSQGIVVHNVRPSCFVMSSFNHVSFIESAS SDSGSDS ++GLN Q +E K+ SS
Sbjct: 109 VNVAHSQGIVVHNVRPSCFVMSSFNHVSFIESASYSDSGSDSLDDGLNRQTVEVKNASS- 167
Query: 194 LPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVN 253
DM Q+R ++ L E +E+K+L R N
Sbjct: 168 FSHDMCQQR--------------------------------NLPLGEETEENKVLGTR-N 194
Query: 254 VEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEE 313
VE EE+KQPFPMKQILLME++WY SPEE+AG+P SCASDIY+LGVLLFELF PF++ E+
Sbjct: 195 VEHEEERKQPFPMKQILLMESSWYTSPEEVAGSPSSCASDIYQLGVLLFELFSPFTSRED 254
Query: 314 KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEE 373
K+RTMSSLRHRVLPPQLLLK+PKEASFCLWLLHPEPS RPKMGELLQSEFLNEPRD +EE
Sbjct: 255 KSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLHPEPSSRPKMGELLQSEFLNEPRDYLEE 314
Query: 374 REAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKG 433
REAAI+LRE+I+E+ELLLEFLL +QQRKQ++A KLQ VS +CSDIEEV+K Q L+KKG
Sbjct: 315 REAAIQLRERIEEQELLLEFLLPMQQRKQDAANKLQGTVSLLCSDIEEVTKHQTFLKKKG 374
Query: 434 GLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKH 493
+ E D N+P LNI D D S+++GSRKRF LQ+ + E CDDNL++ +
Sbjct: 375 --STCKERGEGDHLASNLPPLNIYDIDDSSSLGSRKRFCSGLQILNTEGCDDNLNEGRNS 432
Query: 494 N-LTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGR-PLVRHSQLSSDGRTSKPL 551
+ ++E LF+SSRLMKNFKKLESAYFLTR RPV+P G+ P VR+S +S DGR S +
Sbjct: 433 DTFVESQESPLFRSSRLMKNFKKLESAYFLTRSRPVRPPGKPPFVRNSPVSGDGRGSI-V 491
Query: 552 VNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVC 611
V ERSSIN+L K+ + +GR+SGWI+PFLEGLCKYLS+SKL+VKADL QGDLLNSSNLVC
Sbjct: 492 VTERSSINSLALKDRFIKGRQSGWISPFLEGLCKYLSYSKLKVKADLKQGDLLNSSNLVC 551
Query: 612 SLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ 671
SLSFDRDGE FA AGVNKKIKVFECD IINE RDIHYPVVEM SRSKLSSICWN YI SQ
Sbjct: 552 SLSFDRDGEFFATAGVNKKIKVFECDTIINEARDIHYPVVEMVSRSKLSSICWNRYITSQ 611
Query: 672 IASSNFEGVVQVGQV 686
IASSNFEGVVQV V
Sbjct: 612 IASSNFEGVVQVWDV 626
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357519507|ref|XP_003630042.1| SPA1-like protein [Medicago truncatula] gi|355524064|gb|AET04518.1| SPA1-like protein [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 767 bits (1981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/671 (61%), Positives = 501/671 (74%), Gaps = 34/671 (5%)
Query: 24 QDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGL 83
++S+SSRALN SGVSDRN R G+ S D RK D + GD +N GG
Sbjct: 3 ENSESSRALNSSGVSDRNQR-----ENPFSGEGSQDSRFRKERDWIHGAQGDQNKNLGGF 57
Query: 84 SGVCENEAA-IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142
CE E DPF ++EWGD+SLRQWLDKP RSVD +ECLHIFRQIVEIV AAH QG+
Sbjct: 58 ---CEGEEVENDPFFSSVEWGDISLRQWLDKPDRSVDFFECLHIFRQIVEIVNAAHCQGV 114
Query: 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNT-QNMETKDLSSPLPLDMLQR 201
VVHNVRPSCFVMSSFNH+SFIESASCSD+ SDS +G+N Q +E K +S P D++ +
Sbjct: 115 VVHNVRPSCFVMSSFNHISFIESASCSDTSSDSLGDGVNNDQGVEVKTPTSHCPRDIMHQ 174
Query: 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKK 261
++ ED T+ S++SCM SS+ Y L+E +E+K+ D R + E+VE KK
Sbjct: 175 QS-FGSEDFMPAKISTDARSDSSCMLSSAVYAARASLIEETEENKMKDMRKD-EEVEGKK 232
Query: 262 QPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSL 321
Q FPMKQILLME +WY SPEE+AG P SCASD+YRLG+LLFELFCP S+ EEK+RTMSSL
Sbjct: 233 QSFPMKQILLMEMSWYTSPEEVAGTPSSCASDVYRLGILLFELFCPLSSREEKSRTMSSL 292
Query: 322 RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGEL---LQSEFLNEPRDSMEEREAAI 378
RHRVLPPQLLLK+PKEASFCLWLLHP+PS RP +G L + NE RD MEEREAAI
Sbjct: 293 RHRVLPPQLLLKWPKEASFCLWLLHPDPSSRPTLGSLQGVVAERVPNEQRDDMEEREAAI 352
Query: 379 ELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGGLGSF 438
ELR++I++EELLLEFL L++QRKQE A+KLQ +SF+CSDIEEV+K+Q ++ G+
Sbjct: 353 ELRQKIEDEELLLEFLSLLKQRKQEVAEKLQHTISFLCSDIEEVTKKQTRFKEIAGV--- 409
Query: 439 AELA-NDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHNLTG 497
EL +DD S PS+ +ID++ SA +G+RKR R + HL+ECDDN++ +QK
Sbjct: 410 -ELGGSDDRSASTFPSMTVIDSEDSACLGTRKRVRLGM---HLDECDDNMESDQK----- 460
Query: 498 NEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSS 557
N L K+SRLMKNFKKLESAYFLTRC+P SGRP VRHS +++ GR S +++ERS
Sbjct: 461 NHGSFLSKNSRLMKNFKKLESAYFLTRCKPTYSSGRPGVRHSTIANGGRGS-VVMSERSC 519
Query: 558 INNLGSKEGYSEGR--RSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSF 615
IN+L K+ +GR S WINPFLEGLCKYLSFSKL+VKADL QGDLL+SSNLVCSLSF
Sbjct: 520 INSLALKD---QGRDSASAWINPFLEGLCKYLSFSKLKVKADLKQGDLLHSSNLVCSLSF 576
Query: 616 DRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS 675
DRDGE FA AGVNKKIK+FECD II +RDIHYPVVEMA RSKLSS+CWN+YIKSQIASS
Sbjct: 577 DRDGEFFATAGVNKKIKIFECDTIIKGDRDIHYPVVEMACRSKLSSLCWNTYIKSQIASS 636
Query: 676 NFEGVVQVGQV 686
NFEGVVQ+ V
Sbjct: 637 NFEGVVQLWDV 647
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449446929|ref|XP_004141223.1| PREDICTED: protein SPA1-RELATED 3-like [Cucumis sativus] gi|449498653|ref|XP_004160596.1| PREDICTED: protein SPA1-RELATED 3-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 764 bits (1974), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/613 (67%), Positives = 475/613 (77%), Gaps = 13/613 (2%)
Query: 75 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIV 134
DHLRN +SGVCE + DP++ + +W D+SLRQWLDKP RSVD ECLHIFRQIVEIV
Sbjct: 20 DHLRNLDDISGVCEEDILADPYLRSHKWSDISLRQWLDKPGRSVDALECLHIFRQIVEIV 79
Query: 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 194
AH+QGIVVHNVRPSCFVMSSFNHV+FIESASCSDSGSDS E+G+N+Q E K SSP
Sbjct: 80 NIAHAQGIVVHNVRPSCFVMSSFNHVTFIESASCSDSGSDSLEDGINSQMAEVKTSSSPF 139
Query: 195 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNV 254
P + L E + V P N LSE SCMQSSS Y L EG + + D R ++
Sbjct: 140 P-------SSLGSEGFRSVMTPINALSETSCMQSSSIYAAQASLNEGFGKFRKKDRR-HI 191
Query: 255 EQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEK 314
E+ E+K Q FPMKQIL MET WY SPEE + +P S ASDIYRLGVLLFELFC FS+ EEK
Sbjct: 192 EETEDKVQSFPMKQILAMETTWYTSPEEASDSPSSSASDIYRLGVLLFELFCSFSSREEK 251
Query: 315 TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 374
RTMSSLRHRVLP QLLLK+PKEASFCLWLLHPEP+ RPK+ ELLQS FLNEP+D +EER
Sbjct: 252 NRTMSSLRHRVLPTQLLLKWPKEASFCLWLLHPEPTNRPKLSELLQSVFLNEPKDDLEER 311
Query: 375 EAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGG 434
EAAI+LR++I+E+ELLLEFLLL+QQRKQE+A KLQD +SF+CSDIE+V + Q +K
Sbjct: 312 EAAIKLRKKIEEQELLLEFLLLMQQRKQEAAHKLQDTISFLCSDIEQVMRHQTNFKK--N 369
Query: 435 LGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLDDNQKHN 494
+GS +L D+ LN+PS+ + N SA +GSRKRFRP + H +E C DNLD K +
Sbjct: 370 IGSHTDLVKDNHLPLNLPSMPPVRNTDSAALGSRKRFRPGILTHDIEACGDNLDHCSKTS 429
Query: 495 L-TGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVN 553
NE+ LFKSSRLMKNFKKLE AYFL R R KPS R V+HS +SSDGR S L
Sbjct: 430 SENDNEQGVLFKSSRLMKNFKKLELAYFLMRGRVNKPS-RQFVKHSSVSSDGRGSVVLT- 487
Query: 554 ERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSL 613
ERSS+NNL SKE ++ R+ GWI+PFLEGLCKYLSFSKL+VKADL QGDLLNSSNLVCSL
Sbjct: 488 ERSSVNNLASKESCNDNRQGGWISPFLEGLCKYLSFSKLKVKADLKQGDLLNSSNLVCSL 547
Query: 614 SFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA 673
SFDRDGE FA AGVN+KIKVF D+I+NE+RDIHYPVVEMASRSKLSS+CWN YIKSQIA
Sbjct: 548 SFDRDGEFFATAGVNRKIKVFGYDSIVNEDRDIHYPVVEMASRSKLSSVCWNRYIKSQIA 607
Query: 674 SSNFEGVVQVGQV 686
SSNFEGVVQV V
Sbjct: 608 SSNFEGVVQVWDV 620
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|22331100|ref|NP_683567.1| ubiquitin-protein ligase RFWD2 [Arabidopsis thaliana] gi|332642126|gb|AEE75647.1| ubiquitin-protein ligase RFWD2 [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/680 (57%), Positives = 483/680 (71%), Gaps = 75/680 (11%)
Query: 15 MEGSSDSAWQDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHG 74
MEGSS+S +SR N SGVSDRN L ER R S+ + + V G
Sbjct: 1 MEGSSNS------NSRGFNTSGVSDRNTEFLPVERLTTRSKPSSHVD-----EYVRSLFG 49
Query: 75 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIV 134
++ G ++ IDPFV ++EWGDVSLRQWLDKP+RSVDV+ECLH+FRQIVEIV
Sbjct: 50 STSTHKSGE----DDSLGIDPFVRSLEWGDVSLRQWLDKPERSVDVFECLHVFRQIVEIV 105
Query: 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 194
AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDS E+G +Q K++ S
Sbjct: 106 NAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSLEDGPISQ----KEIGSS- 160
Query: 195 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNV 254
RRE+ +S+A ++ Y +K+L+ ++
Sbjct: 161 -----------RREEA---------VSKAIAIEEKGVY------------NKLLERKIEK 188
Query: 255 EQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEK 314
+ EEK QPFPMK IL MET+WY SPEE G+ +CASD+YRLGVLLFELFCP + EEK
Sbjct: 189 LE-EEKTQPFPMKHILAMETSWYTSPEEDFGSSSTCASDVYRLGVLLFELFCPVPSREEK 247
Query: 315 TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 374
+RTMSSLRHRVLPPQ+LLK PKEASFCLWLLHPEP+ RP M +LLQSEF+ EPRD++EER
Sbjct: 248 SRTMSSLRHRVLPPQILLKCPKEASFCLWLLHPEPTCRPSMSDLLQSEFITEPRDNLEER 307
Query: 375 EAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKGG 434
EAAIELR++I+E+E LLEFLLL+QQRKQESA +LQD VS + SDIE+V K+Q IL+K+G
Sbjct: 308 EAAIELRDRIEEQESLLEFLLLIQQRKQESAYRLQDTVSLLSSDIEQVVKRQLILKKRG- 366
Query: 435 LGSFAELANDD---LSGLNIPSLNIIDNDCSATMGSRKRFRPE-LQLHHLEECDDNLDDN 490
S ++ + DD SG + S + + SA + SRKR R L L + E D+
Sbjct: 367 -SSLSDFSKDDHQYTSGQPLMSFQ-ANEEPSAFLASRKRVRQGILALENGVEVDEE---- 420
Query: 491 QKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVK--PSGRPLVRHSQLSSDGRTS 548
++ +L +SSRLM+NFKKLES YFLTR R +K SG+ L RHS LSS+
Sbjct: 421 -------SQGSTLLESSRLMRNFKKLESVYFLTRRRQMKAAASGKSLTRHSPLSSENGRG 473
Query: 549 KPLVNERSSINNLGSKEGY--SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNS 606
+V+E+SS++N + + + ++ R+ GWI+PFLEGLC+YLSFS+LRVKADL QGDLLNS
Sbjct: 474 SMIVSEKSSVSNPVAPKAFFNNDSRQGGWIDPFLEGLCRYLSFSQLRVKADLKQGDLLNS 533
Query: 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNS 666
SNLVC+L+FDR+GELFA AGVNKKIK+FEC++I+N+NRDIHYPVVE+A RSKLSS+CWNS
Sbjct: 534 SNLVCALAFDREGELFATAGVNKKIKIFECNSIVNDNRDIHYPVVELAGRSKLSSLCWNS 593
Query: 667 YIKSQIASSNFEGVVQVGQV 686
YIKSQIASSNF+GVVQ+ V
Sbjct: 594 YIKSQIASSNFDGVVQIWDV 613
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 720 | ||||||
| TAIR|locus:2037005 | 794 | SPA4 "SPA1-related 4" [Arabido | 0.297 | 0.269 | 0.578 | 1.3e-122 | |
| TAIR|locus:2136133 | 1036 | SPA2 "SPA1-related 2" [Arabido | 0.468 | 0.325 | 0.310 | 2e-62 | |
| TAIR|locus:2039139 | 1029 | SPA1 "SUPPRESSOR OF PHYA-105 1 | 0.416 | 0.291 | 0.333 | 3.4e-60 | |
| TAIR|locus:2059359 | 675 | COP1 "CONSTITUTIVE PHOTOMORPHO | 0.195 | 0.208 | 0.401 | 1.3e-18 | |
| DICTYBASE|DDB_G0288453 | 970 | DDB_G0288453 "E3 ubiquitin-pro | 0.176 | 0.130 | 0.424 | 2.1e-18 | |
| UNIPROTKB|H0Y339 | 566 | RFWD2 "E3 ubiquitin-protein li | 0.156 | 0.199 | 0.412 | 1.4e-14 | |
| RGD|1304773 | 433 | Rfwd2 "ring finger and WD repe | 0.156 | 0.260 | 0.403 | 2.4e-14 | |
| ZFIN|ZDB-GENE-070410-134 | 694 | rfwd2 "ring finger and WD repe | 0.156 | 0.162 | 0.421 | 5.4e-14 | |
| UNIPROTKB|Q8NHY2 | 731 | RFWD2 "E3 ubiquitin-protein li | 0.156 | 0.154 | 0.412 | 1.2e-13 | |
| UNIPROTKB|F1MHX1 | 735 | RFWD2 "Uncharacterized protein | 0.156 | 0.153 | 0.403 | 2.2e-13 |
| TAIR|locus:2037005 SPA4 "SPA1-related 4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 617 (222.3 bits), Expect = 1.3e-122, Sum P(2) = 1.3e-122
Identities = 125/216 (57%), Positives = 154/216 (71%)
Query: 220 LSEASCMQSSSAYG--THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 277
+ ASC S S T + ++ +IL R + +Q E KKQPFPMKQIL ME +WY
Sbjct: 122 IESASCSDSGSDEDATTKSREIGSSRQEEILSERRSKQQEEVKKQPFPMKQILAMEMSWY 181
Query: 278 ASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE 337
S EE G+ +CASDIYRLGVLLFELFCP S+ EEK+RTMSSLRHRVLPPQ+LL +PKE
Sbjct: 182 TSHEEDNGSLCNCASDIYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPPQILLNWPKE 241
Query: 338 ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIXXXXXXXXXXXXXXXXXXV 397
ASFCLWLLHPEPS RP M ELLQSEF+NEPR+++EEREAA+ +
Sbjct: 242 ASFCLWLLHPEPSCRPSMSELLQSEFINEPRENLEEREAAMELRDRIEEQELLLEFLFLI 301
Query: 398 QQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKKG 433
QQRKQE+A KLQD +S + SDI++V K+Q +L++KG
Sbjct: 302 QQRKQEAADKLQDTISLLSSDIDQVVKRQLVLQQKG 337
|
|
| TAIR|locus:2136133 SPA2 "SPA1-related 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 401 (146.2 bits), Expect = 2.0e-62, Sum P(2) = 2.0e-62
Identities = 111/357 (31%), Positives = 175/357 (49%)
Query: 105 VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIE 164
+SLR+WL ++ V+ EC++IFRQIV+ V +HSQG+V+ ++RPS F + N V ++
Sbjct: 301 LSLREWLKSERQEVNKAECMYIFRQIVDHVDCSHSQGVVLCDLRPSSFKIFKENAVKYV- 359
Query: 165 XXXXXXXXXXXHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR-REDLQLVTAPTNDLSEA 223
+ +N + + L +PL L + L Q + P++ +
Sbjct: 360 ---VSGSQRESFDSNMNKETLS--QLENPLVRRRLGDTSSLSIPAKKQKSSGPSS--RQW 412
Query: 224 SCMQSSSAYGTHVVLVEG-MQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEE 282
Q + +G +QE ++ + V PF L E WYASPEE
Sbjct: 413 PMFQRAGGVNIQTENNDGAIQEFHFRSSQPHCSTVA---CPFTSVSEQL-EEKWYASPEE 468
Query: 283 LAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCL 342
L G S +S+IY LG+LL+EL F + MS +RHR+LPP+ L + PKEA FCL
Sbjct: 469 LRGDMRSASSNIYSLGILLYELLSQFQCERAREAAMSDIRHRILPPKFLSENPKEAGFCL 528
Query: 343 WLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIXXXXXXXXXXXXXXXXXXVQQRKQ 402
WLLHPE S RP ++LQSE +N D E ++ Q+++Q
Sbjct: 529 WLLHPESSCRPSTRDILQSEVVNGIPDLYAEG-LSLSIEQEDTESELLQHFLFLSQEKRQ 587
Query: 403 ESAKKLQDIVSFICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDN 459
+ A L + ++ + +DIEE+ K++ + G S E A+ ++P + +I N
Sbjct: 588 KHAGNLMEEIASVEADIEEIVKRRCAI----GPPSLEE-ASSSSPASSVPEMRLIRN 639
|
|
| TAIR|locus:2039139 SPA1 "SUPPRESSOR OF PHYA-105 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 369 (135.0 bits), Expect = 3.4e-60, Sum P(2) = 3.4e-60
Identities = 110/330 (33%), Positives = 164/330 (49%)
Query: 105 VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIE 164
+SLR++L + L +FRQ+VE+V +AHS+ + + ++RPS F + + +I
Sbjct: 275 ISLREFLRSSYAKREKRHGLCLFRQLVELVDSAHSKRLFLLDLRPSLFTLVPSKKLRYIG 334
Query: 165 XXXXXXXXXXXHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224
E+ LN + ++ SS R ++ R+ DL L +P N L S
Sbjct: 335 NFGKNDLESDVDED-LNRRRPVVEESSSG------GRDSKKRKMDLHL-NSPGNQLQATS 386
Query: 225 C----MQSSSAYGTHVVLVEG-----MQEHKILDNRVNVEQVEEKKQPFPMKQILLMETN 275
+ S ++V +Q+ + N ++V V K+ M L E
Sbjct: 387 TGRPFKRKSPVIDLNMVDARNPDSCELQQQDYIKN-LSVSSVSRKQS---MSTWL--EEQ 440
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFP 335
WY PEE+ G + S+IY LGVLLFEL C +GE M+ LRHR+LPP L K+P
Sbjct: 441 WYTCPEEINGEDIGEKSNIYALGVLLFELLCHCESGEMHAAMMADLRHRILPPTFLSKYP 500
Query: 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIXXXXXXXXXXXXXXXXX 395
KEA FCLWLLHPEPS RP ++L+SE + E DS++ AA
Sbjct: 501 KEAGFCLWLLHPEPSSRPSARDILKSELICED-DSVKSTAAA----EEISELLLHFLSSL 555
Query: 396 XVQQRKQESAKKLQDIVSFICSDIEEVSKQ 425
VQ++K+ S K LQDI + + DI+E ++
Sbjct: 556 EVQKKKKAS-KLLQDIQT-LEDDIKEAERR 583
|
|
| TAIR|locus:2059359 COP1 "CONSTITUTIVE PHOTOMORPHOGENIC 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 257 (95.5 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 61/152 (40%), Positives = 89/152 (58%)
Query: 535 LVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLRV 594
L + QL+ D SK N++S + +EGYS G + F L + +S+LRV
Sbjct: 310 LQKRRQLA-DQPNSKQ-ENDKSVVR----REGYSNG-----LADFQSVLTTFTRYSRLRV 358
Query: 595 KADLNQGDXXXXXXXXXXXXFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 654
A++ GD FDRD ELFA AGV++ IKVF+ +++NE D+ P+VEM+
Sbjct: 359 IAEIRHGDIFHSANIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPADMQCPIVEMS 418
Query: 655 SRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686
+RSKLS + WN + K+ IASS++EG+V V V
Sbjct: 419 TRSKLSCLSWNKHEKNHIASSDYEGIVTVWDV 450
|
|
| DICTYBASE|DDB_G0288453 DDB_G0288453 "E3 ubiquitin-protein ligase RFWD2" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 260 (96.6 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 56/132 (42%), Positives = 79/132 (59%)
Query: 553 NERSSINNLGSK-EGYSEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDXXXXXXXXX 611
N S++NNL + E G+ G ++ F L K+ +++ +V A L GD
Sbjct: 615 NTNSNLNNLNNNIESLKVGK--GLLS-FSRNLLKFTKYNEFKVLATLKYGDLFNTSSIVS 671
Query: 612 XXXFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ 671
FDRD E FA AGV KKIK+FE I +N ++H PV EM RSK+S + WN+YIKSQ
Sbjct: 672 SIEFDRDEEYFATAGVTKKIKIFEFSQI-RDNVEVHSPVKEMTCRSKISCLSWNTYIKSQ 730
Query: 672 IASSNFEGVVQV 683
IASS++EG++ +
Sbjct: 731 IASSDYEGIISL 742
|
|
| UNIPROTKB|H0Y339 RFWD2 "E3 ubiquitin-protein ligase RFWD2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 217 (81.4 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 47/114 (41%), Positives = 66/114 (57%)
Query: 569 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DXXXXXXXXXXXXFDRDGELFAAAGV 627
+ R + ++ F E L K+ ++ +R A L+ D FDRD + FA AGV
Sbjct: 217 DSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 276
Query: 628 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681
KKIKV+E D +I + DIHYP EM SK+S I W+SY K+ +ASS++EG V
Sbjct: 277 TKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTV 330
|
|
| RGD|1304773 Rfwd2 "ring finger and WD repeat domain 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 210 (79.0 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 46/114 (40%), Positives = 65/114 (57%)
Query: 569 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DXXXXXXXXXXXXFDRDGELFAAAGV 627
+ R + ++ F E L K+ ++ +R A L+ D FDRD + FA AGV
Sbjct: 84 DSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 143
Query: 628 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681
KKIKV+E +I + DIHYP EM SK+S I W+SY K+ +ASS++EG V
Sbjct: 144 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTV 197
|
|
| ZFIN|ZDB-GENE-070410-134 rfwd2 "ring finger and WD repeat domain 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 220 (82.5 bits), Expect = 5.4e-14, Sum P(3) = 5.4e-14
Identities = 48/114 (42%), Positives = 66/114 (57%)
Query: 569 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DXXXXXXXXXXXXFDRDGELFAAAGV 627
+ R ++ F+E L K+ ++ +R A L+ D FDRD + FA AGV
Sbjct: 345 DSRTVNQLDDFMECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 404
Query: 628 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681
KKIKVFE +I + DIHYPV EM SK+S I W+SY K+ +ASS++EG V
Sbjct: 405 TKKIKVFEYGTVIQDAVDIHYPVNEMTCNSKISCISWSSYHKNLLASSDYEGTV 458
|
|
| UNIPROTKB|Q8NHY2 RFWD2 "E3 ubiquitin-protein ligase RFWD2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 217 (81.4 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 47/114 (41%), Positives = 66/114 (57%)
Query: 569 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DXXXXXXXXXXXXFDRDGELFAAAGV 627
+ R + ++ F E L K+ ++ +R A L+ D FDRD + FA AGV
Sbjct: 382 DSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 441
Query: 628 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681
KKIKV+E D +I + DIHYP EM SK+S I W+SY K+ +ASS++EG V
Sbjct: 442 TKKIKVYEYDTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTV 495
|
|
| UNIPROTKB|F1MHX1 RFWD2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 210 (79.0 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 46/114 (40%), Positives = 65/114 (57%)
Query: 569 EGRRSGWINPFLEGLCKYLSFSKLRVKADLNQG-DXXXXXXXXXXXXFDRDGELFAAAGV 627
+ R + ++ F E L K+ ++ +R A L+ D FDRD + FA AGV
Sbjct: 386 DSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDLYNGSSIVSSIEFDRDCDYFAIAGV 445
Query: 628 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681
KKIKV+E +I + DIHYP EM SK+S I W+SY K+ +ASS++EG V
Sbjct: 446 TKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSSYHKNLLASSDYEGTV 499
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LJR3 | SPA3_ARATH | No assigned EC number | 0.5705 | 0.8402 | 0.7159 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| Your Input: | |||||||||||
| estExt_Genewise1_v1.C_LG_XI3877 | hypothetical protein (851 aa) | ||||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 720 | |||
| PLN00181 | 793 | PLN00181, PLN00181, protein SPA1-RELATED; Provisio | 0.0 | |
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 9e-11 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 3e-09 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 4e-09 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 6e-07 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 2e-06 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 3e-06 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 1e-04 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 4e-04 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 0.002 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 0.002 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 0.003 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 0.003 |
| >gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Score = 687 bits (1773), Expect = 0.0
Identities = 364/681 (53%), Positives = 435/681 (63%), Gaps = 128/681 (18%)
Query: 15 MEGSSDSAWQDSDSSRAL-NISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTH 73
M+GSS+S +SR L N SGVS+ ++ + H D V
Sbjct: 1 MKGSSES------NSRGLNNTSGVSEFC---------------TDGSKSLSHIDYVRSLL 39
Query: 74 GDHLR-NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVE 132
G H N GL D V A+E DVSLRQWLD P RSVD +EC H+FRQIVE
Sbjct: 40 GSHKEGNLDGLD--------DDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVE 91
Query: 133 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSS 192
IV AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD E+ +++ S
Sbjct: 92 IVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD--EDATTKS----REIGS 145
Query: 193 PLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 252
RRE+ IL R
Sbjct: 146 S------------RREE-------------------------------------ILSERR 156
Query: 253 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGE 312
+ E KKQPFPMKQIL ME +WY SPEE G+ +CASD+YRLGVLLFELFCP S+ E
Sbjct: 157 IEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSRE 216
Query: 313 EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 372
EK+RTMSSLRHRVLPPQ+LL +PKEASFCLWLLHPEPS RP M ELLQSEF+NEPR+++E
Sbjct: 217 EKSRTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPRENLE 276
Query: 373 EREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKK 432
EREAA+ELR++I+E+ELLLEFL L+QQRKQE+A KLQD +S + SDI++V K+Q +L++K
Sbjct: 277 EREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKLQDTISLLSSDIDQVVKRQLVLQQK 336
Query: 433 GGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRP-ELQLHHLEECDDNLDDNQ 491
G +D + + SRKR R L EE DDN
Sbjct: 337 G-------------------------SDVRSFLASRKRIRQGAETLAAEEENDDN----- 366
Query: 492 KHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKPSG---RPLVRHSQLSS-DGRT 547
L E +L +SSRLM+N KKLES YF TR R +K + +PL R+ S +GR+
Sbjct: 367 SSKLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAAAAAEKPLARYYSALSENGRS 426
Query: 548 SKPLVNERSSINNLGSKEGY--SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLN 605
S E+SS++N + ++ R+ GWI+PFLEGLCKYLSFSKLRVKADL QGDLLN
Sbjct: 427 S-----EKSSMSNPAKPPDFYINDSRQGGWIDPFLEGLCKYLSFSKLRVKADLKQGDLLN 481
Query: 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWN 665
SSNLVC++ FDRDGE FA AGVNKKIK+FEC++II + RDIHYPVVE+ASRSKLS ICWN
Sbjct: 482 SSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELASRSKLSGICWN 541
Query: 666 SYIKSQIASSNFEGVVQVGQV 686
SYIKSQ+ASSNFEGVVQV V
Sbjct: 542 SYIKSQVASSNFEGVVQVWDV 562
|
Length = 793 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 62.5 bits (153), Expect = 9e-11
Identities = 27/94 (28%), Positives = 36/94 (38%), Gaps = 5/94 (5%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQLL 331
Y +PE L G A DI+ LGV+L+EL PF ++ + + P
Sbjct: 161 EYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPE 220
Query: 332 LKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 364
EA LL +P R E LQ F
Sbjct: 221 WDISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 254
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 57.8 bits (140), Expect = 3e-09
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLP---PQL 330
T Y +PE G P S SDI+ LG LL+E+ F+ E R+M LR++V P +
Sbjct: 164 TPHYMAPEVWKGRPYSYKSDIWSLGCLLYEM-ATFAPPFE-ARSMQDLRYKVQRGKYPPI 221
Query: 331 LLKFPKEAS-FCLWLLHPEPSGRPKMGELLQS 361
+ ++ F +L +P RP ++L S
Sbjct: 222 PPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 57.6 bits (140), Expect = 4e-09
Identities = 33/102 (32%), Positives = 43/102 (42%), Gaps = 13/102 (12%)
Query: 274 TNWYASPEELAGA-PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ 329
T WY +PE L G D++ LGV+L+EL PFS E L R+L P
Sbjct: 161 TPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFS--GENILDQLQLIRRILGPP 218
Query: 330 LLLKFPKE-------ASFCLWLLHPEPSGRPKMGELLQSEFL 364
L PK L+ +PS RP E+LQ +
Sbjct: 219 LEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEILQHPWF 260
|
Length = 260 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 51.0 bits (123), Expect = 6e-07
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL---PPQL 330
Y SPE P + SDI+ LG +L+EL PF + + L ++L P +
Sbjct: 169 YLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPF-----EGENLLELALKILKGQYPPI 223
Query: 331 LLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFL 364
++ E + LL +P RP + ++LQS F+
Sbjct: 224 PSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 2e-06
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 27/150 (18%)
Query: 219 DLSEASCMQSSSAYGTHVVLVE--GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 276
DL+ +C+ SS T VV V GM + +LD+ E FP+K
Sbjct: 125 DLAARNCLVSS----TGVVKVSDFGMTRY-VLDD----EYTSSSGAKFPVK--------- 166
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFC----PF-STGEEKTRTMSSLRHRVLPPQLL 331
++ PE + S SD++ GVL++E+F PF + M S R+ P+L
Sbjct: 167 WSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLA 226
Query: 332 LKFPKEASFCLWLLHPEPSGRPKMGELLQS 361
E + W H +P GRP ELL++
Sbjct: 227 SMTVYEVMYSCW--HEKPEGRPTFAELLRA 254
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 49.1 bits (118), Expect = 3e-06
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 10/98 (10%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF---CPFSTGEEKTRTMSSLRHRVLPPQLLLK 333
Y SPE + G S A+DI+ LG+ L E PF + + ++ P L
Sbjct: 166 YMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPS-FFELMQAICDGPPPSLP 224
Query: 334 FPKEAS--FCLWL---LHPEPSGRPKMGELLQSEFLNE 366
+E S F ++ L +P RP ELLQ F+ +
Sbjct: 225 -AEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKK 261
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 1e-04
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 242 MQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301
++E +LD V+ + P K ++ T Y +PE L G P S ++DIY LGV+L
Sbjct: 165 LEEEDLLDIDVDERNICYSSMTIPGK---IVGTPDYMAPERLLGVPASESTDIYALGVIL 221
Query: 302 FE-LFCPFSTGEEKTRTMSSLRHRVLPPQ 329
++ L F +K R + S R +L P
Sbjct: 222 YQMLTLSFPYRRKKGRKI-SYRDVILSPI 249
|
Length = 932 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 4e-04
Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 15/100 (15%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL--PP 328
T Y SPE L P +SD++ LG +++++ PF E T + PP
Sbjct: 185 TAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY-LTFQKILKLEYSFPP 243
Query: 329 QLLLKFPKEAS-FCLWLLHPEPSGRP----KMGELLQSEF 363
FP +A LL +P R EL F
Sbjct: 244 ----NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 0.002
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMS---SLRHRVLP 327
T +Y +PE P S +D++ LGVLL+EL PF GE M + R+ LP
Sbjct: 208 TPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFD-GENMEEVMHKTLAGRYDPLP 266
Query: 328 PQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 359
P + P+ LL +P RP +LL
Sbjct: 267 PSI---SPEMQEIVTALLSSDPKRRPSSSKLL 295
|
Length = 496 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.002
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 266 MKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF----CPFST-GEEKTRTMSS 320
+KQI + W A PE L + SD++ G+LL+E F P+ ++TR
Sbjct: 154 LKQIPI---KWTA-PEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIE 209
Query: 321 LRHRVLPPQLLLKFPKEASFCLWLL--HPEPSGRPKMGELLQS 361
+R+ PQL E + L L +P RP E+
Sbjct: 210 SGYRMPAPQLC----PEEIYRLMLQCWAYDPENRPSFSEIYNE 248
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 40.5 bits (93), Expect = 0.003
Identities = 25/117 (21%), Positives = 37/117 (31%), Gaps = 17/117 (14%)
Query: 274 TNWYASPEELAG---APVSCASDIYRLGVLLFELFC-----PFSTGEEKTRTMSSLRHRV 325
T Y +PE L G A S +SDI+ LG+ L+EL T + +
Sbjct: 171 TPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILEL 230
Query: 326 LPPQLLLKFPKE---------ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEE 373
P L + LL +P R L + L + +
Sbjct: 231 PTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESD 287
|
Length = 384 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.003
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 10/101 (9%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFEL----FCPFSTGEEKTRTMSSLRHRVL--- 326
T+ Y +PE + G S SDI+ LG+ L EL F P+ + + L ++
Sbjct: 162 TSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRF-PYPPENDPPDGIFELLQYIVNEP 220
Query: 327 PPQLLL-KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLN 365
PP+L KF + F L +P RP ELL+ F+
Sbjct: 221 PPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIK 261
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 720 | |||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 99.98 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 99.98 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 99.98 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 99.98 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 99.98 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 99.98 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 99.98 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 99.98 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 99.98 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 99.98 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 99.98 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 99.98 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 99.98 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 99.98 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 99.98 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 99.97 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 99.97 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 99.97 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 99.97 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 99.97 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 99.97 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 99.97 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 99.97 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 99.97 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 99.97 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 99.97 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 99.97 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 99.97 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 99.97 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 99.97 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 99.97 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 99.97 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 99.97 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 99.97 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 99.97 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 99.97 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 99.97 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 99.97 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 99.97 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 99.97 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 99.97 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 99.97 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 99.97 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 99.97 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 99.97 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 99.97 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 99.97 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 99.97 | |
| PTZ00284 | 467 | protein kinase; Provisional | 99.97 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 99.97 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 99.97 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 99.97 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 99.97 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 99.97 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 99.97 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 99.97 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 99.97 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 99.97 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 99.97 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 99.97 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 99.97 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 99.97 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 99.97 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 99.97 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 99.97 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 99.97 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 99.97 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 99.97 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 99.97 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 99.97 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 99.97 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 99.97 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 99.97 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 99.96 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 99.96 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 99.96 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 99.96 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 99.96 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 99.96 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 99.96 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 99.96 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 99.96 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 99.96 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 99.96 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 99.96 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 99.96 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 99.96 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 99.96 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 99.96 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.96 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 99.96 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 99.96 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 99.96 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 99.96 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 99.96 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 99.96 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 99.96 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 99.96 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 99.96 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 99.96 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 99.96 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 99.96 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 99.96 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 99.96 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 99.96 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 99.96 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 99.96 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 99.96 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 99.96 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 99.96 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 99.96 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 99.96 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 99.96 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 99.96 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 99.96 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 99.96 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 99.96 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 99.96 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 99.96 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 99.96 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 99.96 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 99.96 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 99.96 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.96 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 99.96 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 99.96 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 99.96 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 99.96 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 99.96 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 99.96 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.96 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 99.96 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 99.96 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 99.96 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 99.96 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 99.96 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 99.96 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 99.96 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 99.96 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 99.96 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 99.96 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 99.96 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 99.96 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 99.96 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 99.96 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 99.96 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 99.96 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 99.96 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 99.96 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 99.96 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 99.96 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 99.96 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 99.96 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 99.96 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 99.96 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 99.96 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 99.96 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 99.96 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 99.96 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 99.96 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 99.96 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 99.96 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 99.96 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 99.96 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 99.96 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 99.95 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 99.95 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 99.95 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 99.95 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 99.95 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 99.95 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 99.95 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.95 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 99.95 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 99.95 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 99.95 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 99.95 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 99.95 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 99.95 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 99.95 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 99.95 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 99.95 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 99.95 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 99.95 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 99.95 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 99.95 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 99.95 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 99.95 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 99.95 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 99.95 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 99.95 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 99.95 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 99.95 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 99.95 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 99.95 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 99.95 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 99.95 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 99.95 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 99.95 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 99.95 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 99.95 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 99.95 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 99.95 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 99.95 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 99.95 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 99.95 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 99.95 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 99.95 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 99.95 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 99.95 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 99.95 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 99.95 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 99.95 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 99.95 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 99.95 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 99.95 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 99.95 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 99.95 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 99.95 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 99.95 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 99.95 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.95 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 99.95 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 99.95 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 99.95 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 99.95 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 99.95 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 99.95 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 99.95 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 99.95 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 99.94 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.94 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 99.94 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 99.94 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.94 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 99.94 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 99.94 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 99.94 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 99.94 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.94 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 99.94 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.94 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.93 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.93 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.93 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 99.93 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 99.93 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.92 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.92 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 99.92 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.92 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.92 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.92 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.91 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.91 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 99.91 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.91 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.91 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.9 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.9 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.9 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.89 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.89 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.88 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.88 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.88 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.87 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.85 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.83 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.81 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.79 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.79 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.71 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.71 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.67 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.63 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 99.6 | |
| KOG0275 | 508 | consensus Conserved WD40 repeat-containing protein | 99.6 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 99.59 | |
| KOG0271 | 480 | consensus Notchless-like WD40 repeat-containing pr | 99.57 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.57 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 99.56 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.55 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 99.55 | |
| PTZ00421 | 493 | coronin; Provisional | 99.54 | |
| KOG0272 | 459 | consensus U4/U6 small nuclear ribonucleoprotein Pr | 99.54 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 99.54 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.53 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 99.52 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 99.52 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.51 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.51 | |
| PTZ00420 | 568 | coronin; Provisional | 99.49 | |
| KOG0318 | 603 | consensus WD40 repeat stress protein/actin interac | 99.48 | |
| KOG0266 | 456 | consensus WD40 repeat-containing protein [General | 99.48 | |
| KOG0263 | 707 | consensus Transcription initiation factor TFIID, s | 99.47 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.46 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.45 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.45 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.43 | |
| KOG0283 | 712 | consensus WD40 repeat-containing protein [Function | 99.43 | |
| KOG0279 | 315 | consensus G protein beta subunit-like protein [Sig | 99.43 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.42 | |
| KOG0316 | 307 | consensus Conserved WD40 repeat-containing protein | 99.41 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 99.41 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.4 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.4 | |
| KOG0291 | 893 | consensus WD40-repeat-containing subunit of the 18 | 99.4 | |
| KOG0285 | 460 | consensus Pleiotropic regulator 1 [RNA processing | 99.38 | |
| KOG0313 | 423 | consensus Microtubule binding protein YTM1 (contai | 99.38 | |
| KOG0295 | 406 | consensus WD40 repeat-containing protein [Function | 99.38 | |
| KOG0276 | 794 | consensus Vesicle coat complex COPI, beta' subunit | 99.35 | |
| KOG0265 | 338 | consensus U5 snRNP-specific protein-like factor an | 99.34 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 99.32 | |
| KOG0282 | 503 | consensus mRNA splicing factor [Function unknown] | 99.32 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 99.31 | |
| PTZ00420 | 568 | coronin; Provisional | 99.31 | |
| KOG0285 | 460 | consensus Pleiotropic regulator 1 [RNA processing | 99.29 | |
| KOG1407 | 313 | consensus WD40 repeat protein [Function unknown] | 99.29 | |
| KOG0283 | 712 | consensus WD40 repeat-containing protein [Function | 99.28 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 99.28 | |
| KOG0647 | 347 | consensus mRNA export protein (contains WD40 repea | 99.28 | |
| PTZ00421 | 493 | coronin; Provisional | 99.27 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.25 | |
| KOG0293 | 519 | consensus WD40 repeat-containing protein [Function | 99.25 | |
| KOG0295 | 406 | consensus WD40 repeat-containing protein [Function | 99.25 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.25 | |
| KOG0286 | 343 | consensus G-protein beta subunit [General function | 99.25 | |
| KOG0303 | 472 | consensus Actin-binding protein Coronin, contains | 99.24 | |
| KOG0316 | 307 | consensus Conserved WD40 repeat-containing protein | 99.24 | |
| KOG0313 | 423 | consensus Microtubule binding protein YTM1 (contai | 99.23 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.22 | |
| KOG0275 | 508 | consensus Conserved WD40 repeat-containing protein | 99.22 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.22 | |
| KOG0645 | 312 | consensus WD40 repeat protein [General function pr | 99.21 | |
| KOG0302 | 440 | consensus Ribosome Assembly protein [General funct | 99.21 | |
| KOG0292 | 1202 | consensus Vesicle coat complex COPI, alpha subunit | 99.21 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.2 | |
| KOG0284 | 464 | consensus Polyadenylation factor I complex, subuni | 99.19 | |
| KOG0264 | 422 | consensus Nucleosome remodeling factor, subunit CA | 99.18 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 99.18 | |
| KOG0319 | 775 | consensus WD40-repeat-containing subunit of the 18 | 99.18 | |
| KOG0310 | 487 | consensus Conserved WD40 repeat-containing protein | 99.17 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.17 | |
| KOG0277 | 311 | consensus Peroxisomal targeting signal type 2 rece | 99.16 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 99.15 | |
| KOG0305 | 484 | consensus Anaphase promoting complex, Cdc20, Cdh1, | 99.14 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.14 | |
| KOG0277 | 311 | consensus Peroxisomal targeting signal type 2 rece | 99.13 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.13 | |
| KOG0973 | 942 | consensus Histone transcription regulator HIRA, WD | 99.13 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.12 | |
| KOG0278 | 334 | consensus Serine/threonine kinase receptor-associa | 99.12 | |
| KOG0273 | 524 | consensus Beta-transducin family (WD-40 repeat) pr | 99.11 | |
| KOG0315 | 311 | consensus G-protein beta subunit-like protein (con | 99.1 | |
| KOG0772 | 641 | consensus Uncharacterized conserved protein, conta | 99.1 | |
| KOG0264 | 422 | consensus Nucleosome remodeling factor, subunit CA | 99.09 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.09 | |
| KOG0282 | 503 | consensus mRNA splicing factor [Function unknown] | 99.08 | |
| KOG0640 | 430 | consensus mRNA cleavage stimulating factor complex | 99.08 | |
| KOG0643 | 327 | consensus Translation initiation factor 3, subunit | 99.07 | |
| KOG1407 | 313 | consensus WD40 repeat protein [Function unknown] | 99.06 | |
| KOG1273 | 405 | consensus WD40 repeat protein [General function pr | 99.05 | |
| KOG0276 | 794 | consensus Vesicle coat complex COPI, beta' subunit | 99.04 |
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-70 Score=652.65 Aligned_cols=580 Identities=60% Similarity=0.930 Sum_probs=433.9
Q ss_pred cCCCcccccccccCCccc-ccccccCCCCCCccccccccccCCCCccceeeeehhhhcccCCC-CCceeccccee----e
Q 004998 15 MEGSSDSAWQDSDSSRAL-NISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDH-LRNQGGLSGVC----E 88 (720)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~H-pnIV~l~~~~~----~ 88 (720)
|||++++ ++|+| |++++..++.+. .+.+.| +||+++++ .+ .
T Consensus 1 ~~~~~~~------~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~-~~~~~~~ 47 (793)
T PLN00181 1 MKGSSES------NSRGLNNTSGVSEFCTDG--------------------------SKSLSHIDYVRSLLG-SHKEGNL 47 (793)
T ss_pred CCCcccC------CCcCccCcccccccCCCc--------------------------cchhhHHHHHHHhhc-ccCCccc
Confidence 7887765 78888 888888877766 234556 68888888 34 2
Q ss_pred cCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcc
Q 004998 89 NEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 89 ~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
++.....++.+|||.+++|.+||......+++.+++.|++||+.||+|||++|||||||||+||||+..|.+|++|||.+
T Consensus 48 ~~~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~ 127 (793)
T PLN00181 48 DGLDDDSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASC 127 (793)
T ss_pred cccccchhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeecccc
Confidence 22233357888999888999999766667999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccccc
Q 004998 169 SDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKIL 248 (720)
Q Consensus 169 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~ 248 (720)
.+.+.+. ...++++|||+++......... .
T Consensus 128 ~~~~~~~--------------------------~~~~ki~DfG~a~~~~~~~~~~-----------------------~- 157 (793)
T PLN00181 128 SDSGSDE--------------------------DATTKSREIGSSRREEILSERR-----------------------I- 157 (793)
T ss_pred Ccccccc--------------------------cCcccccccccccccccccccc-----------------------h-
Confidence 7654321 1235679999987432110000 0
Q ss_pred ccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccccCCCCchHHHHHHHhhcCCCCc
Q 004998 249 DNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPP 328 (720)
Q Consensus 249 d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~ 328 (720)
..........++......+||++|||||++.+..|+.++|||||||+||||++|+.+.......+..+....+|+
T Consensus 158 -----~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~~~~ 232 (793)
T PLN00181 158 -----EKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRVLPP 232 (793)
T ss_pred -----hhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhhcCh
Confidence 000011122233333446899999999999999999999999999999999998877665555566666666676
Q ss_pred cccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccchHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 004998 329 QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKL 408 (720)
Q Consensus 329 ~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l~e~~~~~~~~e~~~~~e~L~~fL~~l~~qK~e~~~~l 408 (720)
.....++...+++.+||+++|.+||++.|+|+||||......+.+++......+..++.+.+.+|+...++++++++.++
T Consensus 233 ~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 312 (793)
T PLN00181 233 QILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEPRENLEEREAAMELRDRIEEQELLLEFLFLIQQRKQEAADKL 312 (793)
T ss_pred hhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhhhHHhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667788889999999999999999999999999998765555555555555555666777888888889999999999
Q ss_pred HHHHHhhhcchHHHHHHHHHHHhcCCCCcchhcccccCCCCCCCCccccCCCCCcccCcccccccccccccccccccccc
Q 004998 409 QDIVSFICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMGSRKRFRPELQLHHLEECDDNLD 488 (720)
Q Consensus 409 q~el~~Le~Di~evE~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 488 (720)
+.+++.|+.||+++++|+......+... ......++++..+......+.....
T Consensus 313 ~~~~~~l~~~i~~~~~r~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~-- 365 (793)
T PLN00181 313 QDTISLLSSDIDQVVKRQLVLQQKGSDV-------------------------RSFLASRKRIRQGAETLAAEEENDD-- 365 (793)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccccccc-------------------------ccccccchhhhccccchhhcccccc--
Confidence 9999999999999998775543322111 1112223333333322211111110
Q ss_pred ccccCCCCCCccchhhhhhHHHHhHhHHHHHHHhhccCCCCC---CCCCccccccCCC-CCCCCCcccccccccccCCCc
Q 004998 489 DNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCRPVKP---SGRPLVRHSQLSS-DGRTSKPLVNERSSINNLGSK 564 (720)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~y~~~r~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 564 (720)
..+....+..+.+++++|||.||++||+|||++|++.... ..++..+.++... +++++ +.++.++.+..
T Consensus 366 --~~~~~~~~~~s~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 438 (793)
T PLN00181 366 --NSSKLDDTLESTLLESSRLMRNLKKLESVYFATRYRQIKAAAAAEKPLARYYSALSENGRSS-----EKSSMSNPAKP 438 (793)
T ss_pred --ccccccccccccchhhhHHHHHHHHHHHHHhhhhhccccccccccccccccccccccccccc-----ccccccccccc
Confidence 0001223446677889999999999999999999865332 3444444444443 33332 33444444333
Q ss_pred cC-c-cCCCCCccccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccc
Q 004998 565 EG-Y-SEGRRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE 642 (720)
Q Consensus 565 ~~-~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~ 642 (720)
+. | ....+++|+++|+++|+++++++++++.+.++.|++.+|.+.|++|+|+|||++|||||.|++|+|||+......
T Consensus 439 ~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~ 518 (793)
T PLN00181 439 PDFYINDSRQGGWIDPFLEGLCKYLSFSKLRVKADLKQGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKD 518 (793)
T ss_pred ccccccccccccchhhhhhhhhhhhcccceEEEEeeccccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCccccc
Confidence 22 2 122366789999999999999999999999999999999999999999999999999999999999998765444
Q ss_pred ccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecC-CceEEEecCccc
Q 004998 643 NRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNK-LLIIFRYGMFQE 714 (720)
Q Consensus 643 ~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~-~~~~~~~~~~~~ 714 (720)
..+.|+|+..+.++++|.+++|+|+++++|||+++||+|+|||+.+++.+.+ |++++|++ .+..+++|+.|.
T Consensus 519 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg 598 (793)
T PLN00181 519 GRDIHYPVVELASRSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDG 598 (793)
T ss_pred ccccccceEEecccCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCC
Confidence 4567788888888889999999998888999999999999999999988765 89999996 789999999986
Q ss_pred eE
Q 004998 715 VK 716 (720)
Q Consensus 715 ~~ 716 (720)
.-
T Consensus 599 ~v 600 (793)
T PLN00181 599 SV 600 (793)
T ss_pred EE
Confidence 43
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-43 Score=364.98 Aligned_cols=250 Identities=17% Similarity=0.166 Sum_probs=184.7
Q ss_pred ccccCCcccccccccC------CCCCCccccccc-cccCCC----CccceeeeehhhhcccCCCCCceecccceeecCCC
Q 004998 24 QDSDSSRALNISGVSD------RNPRLLRGERFG-VRGDDS----NDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAA 92 (720)
Q Consensus 24 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~~~~----~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~ 92 (720)
...-.++.+|.|+++. ++.+...+.+|. .+.... ....++-.+|..+|.+|+|||||++++ +|+...
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d-~f~~~d- 249 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKD-FFEVPD- 249 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEee-eeecCC-
Confidence 3444567777777665 444443333333 222111 123334468889999999999999999 776665
Q ss_pred CCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccC---CceEEeccCcc
Q 004998 93 IDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF---NHVSFIESASC 168 (720)
Q Consensus 93 ~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~---~~vkliDfg~a 168 (720)
..|+|||| .||+|.+++-.++. +.+...+.+++|++.||.|||++||+||||||+|||+..+ ..+||+|||+|
T Consensus 250 --s~YmVlE~v~GGeLfd~vv~nk~-l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlA 326 (475)
T KOG0615|consen 250 --SSYMVLEYVEGGELFDKVVANKY-LREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLA 326 (475)
T ss_pred --ceEEEEEEecCccHHHHHHhccc-cccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchh
Confidence 45999999 99999999955544 8999999999999999999999999999999999999865 66788777666
Q ss_pred cCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccccc
Q 004998 169 SDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKIL 248 (720)
Q Consensus 169 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~ 248 (720)
+..|.. .|
T Consensus 327 K~~g~~----------------------------------sf-------------------------------------- 334 (475)
T KOG0615|consen 327 KVSGEG----------------------------------SF-------------------------------------- 334 (475)
T ss_pred hccccc----------------------------------ee--------------------------------------
Confidence 544321 00
Q ss_pred ccccchhhhhcccCCCCccccccccCCcccCCccccCCC---CCccccchhhhhhhhhccccCCCC---chHHHHHHHhh
Q 004998 249 DNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLLFELFCPFSTG---EEKTRTMSSLR 322 (720)
Q Consensus 249 d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwSLGvll~eLltpf~~~---~~~~~~~~~l~ 322 (720)
-...+|||.|.|||++.+.. +..++|||||||+||-+|++|.++ .....+...+.
T Consensus 335 -------------------m~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~ 395 (475)
T KOG0615|consen 335 -------------------MKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQIL 395 (475)
T ss_pred -------------------hhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHh
Confidence 01268999999999998776 344899999999999999955444 33333455555
Q ss_pred cCCC--CccccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 323 HRVL--PPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 323 ~~~~--p~~~~~~~p~~-~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.+.+ -|..+...+++ .+||.+||..||++|||+.|+|+||||+....
T Consensus 396 ~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~ 445 (475)
T KOG0615|consen 396 KGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPC 445 (475)
T ss_pred cCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccc
Confidence 5443 23334444444 49999999999999999999999999997643
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-39 Score=336.92 Aligned_cols=208 Identities=22% Similarity=0.271 Sum_probs=174.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gIv 143 (720)
+|..+|...+||+||++|++|+.... .++++||| +||+|.++++..++ ++|...-.|+.+|+.||.|||. ++||
T Consensus 126 rEl~il~~~~spyIV~~ygaF~~~~~---~isI~mEYMDgGSLd~~~k~~g~-i~E~~L~~ia~~VL~GL~YLh~~~~II 201 (364)
T KOG0581|consen 126 RELEILRSCQSPYIVGFYGAFYSNGE---EISICMEYMDGGSLDDILKRVGR-IPEPVLGKIARAVLRGLSYLHEERKII 201 (364)
T ss_pred HHHHHHhhCCCCCeeeEeEEEEeCCc---eEEeehhhcCCCCHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHhhccCee
Confidence 89999999999999999996665553 47999999 99999999966544 9999999999999999999995 9999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++..|.|||||||.+...... +
T Consensus 202 HRDIKPsNlLvNskGeVKicDFGVS~~lvnS-------------------------------------~----------- 233 (364)
T KOG0581|consen 202 HRDIKPSNLLVNSKGEVKICDFGVSGILVNS-------------------------------------I----------- 233 (364)
T ss_pred eccCCHHHeeeccCCCEEeccccccHHhhhh-------------------------------------h-----------
Confidence 9999999999999999999999987332000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
....+||..|||||.+.+..|+.++||||||+.++|
T Consensus 234 --------------------------------------------a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE 269 (364)
T KOG0581|consen 234 --------------------------------------------ANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLE 269 (364)
T ss_pred --------------------------------------------cccccccccccChhhhcCCcCCcccceecccHHHHH
Confidence 012589999999999999999999999999999999
Q ss_pred ccc---cCCCC----chHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 304 LFC---PFSTG----EEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 304 Llt---pf~~~----~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|++ ||.+. ......+..|.....|......++ +..+|+..||++||.+||++.|+|+|||+++...
T Consensus 270 ~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~ 343 (364)
T KOG0581|consen 270 LAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED 343 (364)
T ss_pred HhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence 999 66653 456677777776554444443354 4569999999999999999999999999997643
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=346.64 Aligned_cols=234 Identities=20% Similarity=0.263 Sum_probs=190.2
Q ss_pred CCCCCcccccccccc-CCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCC
Q 004998 40 RNPRLLRGERFGVRG-DDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRS 117 (720)
Q Consensus 40 ~~~~~~~~~~~~~~~-~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~ 117 (720)
...+..++.+++... ..+..--.+.|+|+++|.-+.||||+++|++| ++.. ++|+|.|| .||.|+++|..++.
T Consensus 34 ~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVw-e~~~---~lylvlEyv~gGELFdylv~kG~- 108 (786)
T KOG0588|consen 34 AETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVW-ENKQ---HLYLVLEYVPGGELFDYLVRKGP- 108 (786)
T ss_pred ccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeee-ccCc---eEEEEEEecCCchhHHHHHhhCC-
Confidence 556666777666554 44555566899999999999999999999944 4443 68999999 99999999966554
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchh
Q 004998 118 VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 197 (720)
Q Consensus 118 l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (720)
+++.++.++|+||+.||.|||..+|+||||||+|+||+..+++||+|||+|..--.
T Consensus 109 l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~------------------------ 164 (786)
T KOG0588|consen 109 LPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVP------------------------ 164 (786)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccC------------------------
Confidence 99999999999999999999999999999999999999999999998888732100
Q ss_pred hHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcc
Q 004998 198 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 277 (720)
Q Consensus 198 ~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y 277 (720)
.++.. ..||+|+|
T Consensus 165 -----------------------------------------------gklLe--------------------TSCGSPHY 177 (786)
T KOG0588|consen 165 -----------------------------------------------GKLLE--------------------TSCGSPHY 177 (786)
T ss_pred -----------------------------------------------Ccccc--------------------ccCCCccc
Confidence 01111 14899999
Q ss_pred cCCccccCCCC-Cccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCC
Q 004998 278 ASPEELAGAPV-SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 278 ~APE~l~~~~~-s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~R 352 (720)
.|||++.|.+| +.++||||.|||||.||+ ||+..+.. ..+..++++.+.-. ..+ ++..+||.+||..||++|
T Consensus 178 A~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir-~LLlKV~~G~f~MP--s~Is~eaQdLLr~ml~VDp~~R 254 (786)
T KOG0588|consen 178 AAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIR-VLLLKVQRGVFEMP--SNISSEAQDLLRRMLDVDPSTR 254 (786)
T ss_pred CCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHH-HHHHHHHcCcccCC--CcCCHHHHHHHHHHhccCcccc
Confidence 99999999997 899999999999999999 89865554 56667777765322 334 445599999999999999
Q ss_pred CChHHHHcCcccCCCccchH
Q 004998 353 PKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 353 pta~eiL~hp~~~~~~~~l~ 372 (720)
.|++||+.|||+.+....-.
T Consensus 255 iT~~eI~kHP~l~g~~~~~~ 274 (786)
T KOG0588|consen 255 ITTEEILKHPFLSGYTSLPS 274 (786)
T ss_pred ccHHHHhhCchhhcCCCCCh
Confidence 99999999999998755433
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-39 Score=317.41 Aligned_cols=204 Identities=18% Similarity=0.258 Sum_probs=165.4
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHH---hCCCCCCCHHHHHHHHHHHHHHHHHHHH--
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWL---DKPKRSVDVYECLHIFRQIVEIVYAAHS-- 139 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L---~~~~~~l~~~~~~~i~~QIl~aL~yLHs-- 139 (720)
.|+-+|++|+|||||++|+..+..+.. -++||||| .+|+|.+.| ++..+.+++..++.+|.|++.||.++|+
T Consensus 67 ~Ei~lLkQL~HpNIVqYy~~~f~~~~e--vlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~ 144 (375)
T KOG0591|consen 67 KEISLLKQLNHPNIVQYYAHSFIEDNE--VLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI 144 (375)
T ss_pred HHHHHHHhcCCchHHHHHHHhhhccch--hhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc
Confidence 788899999999999999944433332 36899999 999999988 4456669999999999999999999999
Q ss_pred cC--ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 140 QG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 140 ~g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
.. |+||||||.||+|+.+|.|||.|||++ ++..
T Consensus 145 ~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~---------------------------------------------r~l~ 179 (375)
T KOG0591|consen 145 PRGTVMHRDIKPANIFLTANGVVKLGDFGLG---------------------------------------------RFLS 179 (375)
T ss_pred cccceeeccCcchheEEcCCCceeeccchhH---------------------------------------------hHhc
Confidence 45 999999999999999999999655555 3322
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
..... ....+|||+||+||.+.+.+|+++||||||
T Consensus 180 s~~tf---------------------------------------------A~S~VGTPyYMSPE~i~~~~Y~~kSDiWsl 214 (375)
T KOG0591|consen 180 SKTTF---------------------------------------------AHSLVGTPYYMSPERIHESGYNFKSDIWSL 214 (375)
T ss_pred chhHH---------------------------------------------HHhhcCCCcccCHHHHhcCCCCcchhHHHH
Confidence 21111 123799999999999999999999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|||+. ||.+. ........|.++.+||-+...++.. ..+|..|+.+||..||+. +|++...
T Consensus 215 GCllyEMcaL~~PF~g~-n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t-----~~~v~di 282 (375)
T KOG0591|consen 215 GCLLYEMCALQSPFYGD-NLLSLCKKIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDT-----VPYVQDI 282 (375)
T ss_pred HHHHHHHHhcCCCcccc-cHHHHHHHHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCc-----chHHHHH
Confidence 999999998 89887 5557777888888877664555444 489999999999999986 4554444
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=345.10 Aligned_cols=243 Identities=21% Similarity=0.236 Sum_probs=187.0
Q ss_pred ccCCcccccccccC------CCCCCccccccccccC-CCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEE
Q 004998 26 SDSSRALNISGVSD------RNPRLLRGERFGVRGD-DSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVH 98 (720)
Q Consensus 26 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~l 98 (720)
..-++-+|-|+|.. .+.+...+.+++-... -....+-+-.+|+.|.++|+|||||++|+ +|++.. .+|+
T Consensus 20 Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~-~FEDs~---nVYi 95 (592)
T KOG0575|consen 20 YKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYH-FFEDSN---NVYI 95 (592)
T ss_pred eeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeee-EeecCC---ceEE
Confidence 33456677777766 2344444444443311 11222224447888999999999999999 888886 6799
Q ss_pred EEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcc
Q 004998 99 AIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHE 177 (720)
Q Consensus 99 v~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~ 177 (720)
|+|+ ..++|.++++ ...+++|.+++.+++||+.||.|||+++|||||||..||||+++.+|||.|||+|.....+
T Consensus 96 vLELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~--- 171 (592)
T KOG0575|consen 96 VLELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD--- 171 (592)
T ss_pred EEEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCc---
Confidence 9999 8999999886 4456999999999999999999999999999999999999999999999887777432111
Q ss_pred cccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhh
Q 004998 178 EGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQV 257 (720)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~ 257 (720)
T Consensus 172 -------------------------------------------------------------------------------- 171 (592)
T KOG0575|consen 172 -------------------------------------------------------------------------------- 171 (592)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCC--CCccccc
Q 004998 258 EEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLL 332 (720)
Q Consensus 258 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~ 332 (720)
++++ .+.+|||.|+|||++....+++.+||||+||+||.||+ ||....- ..++..|.... +|. .
T Consensus 172 ~Erk-------~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v-kety~~Ik~~~Y~~P~---~ 240 (592)
T KOG0575|consen 172 GERK-------KTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV-KETYNKIKLNEYSMPS---H 240 (592)
T ss_pred cccc-------ceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH-HHHHHHHHhcCccccc---c
Confidence 0111 12689999999999999999999999999999999999 5555433 35666666433 333 3
Q ss_pred cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 333 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 333 ~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
..+..++||.+||.+||.+|||+++||.|+||...
T Consensus 241 ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g 275 (592)
T KOG0575|consen 241 LSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG 275 (592)
T ss_pred cCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence 34555699999999999999999999999999554
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-38 Score=318.42 Aligned_cols=215 Identities=18% Similarity=0.262 Sum_probs=167.4
Q ss_pred Cccceeee--ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Q 004998 58 NDFELRKH--SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 58 ~~~~~r~~--~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
.+...++. ||+.+|.+++|||+|.+++ +|.... .+++|+||...++.+-|......++...++.|++|++.|+.
T Consensus 40 dd~~VkKIAlREIrmLKqLkH~NLVnLiE-VFrrkr---klhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~ 115 (396)
T KOG0593|consen 40 DDPVVKKIALREIRMLKQLKHENLVNLIE-VFRRKR---KLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIH 115 (396)
T ss_pred ccHHHHHHHHHHHHHHHhcccchHHHHHH-HHHhcc---eeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhh
Confidence 34555555 8999999999999999999 444433 57999999888888888777777999999999999999999
Q ss_pred HHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|+|++++|||||||+||||+.+|.+||||||+|+....+ +|.
T Consensus 116 ~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p---------------------------------gd~----- 157 (396)
T KOG0593|consen 116 FCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP---------------------------------GDN----- 157 (396)
T ss_pred hhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCC---------------------------------cch-----
Confidence 999999999999999999999999999998888554221 000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccc
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDI 294 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDI 294 (720)
-+.++.|.||+|||.+.|. +|++++||
T Consensus 158 ----------------------------------------------------YTDYVATRWYRaPELLvGDtqYG~pVDi 185 (396)
T KOG0593|consen 158 ----------------------------------------------------YTDYVATRWYRAPELLVGDTQYGKPVDI 185 (396)
T ss_pred ----------------------------------------------------hhhhhhhhhccChhhhcccCcCCCcccc
Confidence 0225789999999999995 59999999
Q ss_pred hhhhhhhhhccc--cCCCC-chHHHHHHHhhc-CCC------------------------CccccccCch----HHHHHH
Q 004998 295 YRLGVLLFELFC--PFSTG-EEKTRTMSSLRH-RVL------------------------PPQLLLKFPK----EASFCL 342 (720)
Q Consensus 295 wSLGvll~eLlt--pf~~~-~~~~~~~~~l~~-~~~------------------------p~~~~~~~p~----~~~li~ 342 (720)
||+||++.||++ |+.+. .+....+..... +.+ +..+...+|. .++|+.
T Consensus 186 WAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k 265 (396)
T KOG0593|consen 186 WAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLK 265 (396)
T ss_pred hhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHH
Confidence 999999999999 55444 333332222111 111 1112223332 349999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCC
Q 004998 343 WLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
.||+.||.+|++.+++|.||||..
T Consensus 266 ~cL~~dP~~R~sc~qll~H~yFd~ 289 (396)
T KOG0593|consen 266 KCLKMDPDDRLSCEQLLHHPYFDG 289 (396)
T ss_pred HHhcCCccccccHHHHhcChHHHH
Confidence 999999999999999999999943
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-38 Score=327.52 Aligned_cols=225 Identities=18% Similarity=0.269 Sum_probs=179.8
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+.||.+++||.||+++. .|++.. .+|+|+|| .||.|+-.|.+.+. +++..++.|+..|+.||.|||++||||
T Consensus 74 ~Er~IL~~v~hPFiv~l~y-sFQt~~---kLylVld~~~GGeLf~hL~~eg~-F~E~~arfYlaEi~lAL~~LH~~gIiy 148 (357)
T KOG0598|consen 74 AERNILSKIKHPFIVKLIY-SFQTEE---KLYLVLDYLNGGELFYHLQREGR-FSEDRARFYLAEIVLALGYLHSKGIIY 148 (357)
T ss_pred HHHHHHHhCCCCcEeeeEE-ecccCC---eEEEEEeccCCccHHHHHHhcCC-cchhHHHHHHHHHHHHHHHHHhCCeee
Confidence 7788999999999999999 677765 67999999 99999999965554 999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+..|+++|+|||+|+..-... +
T Consensus 149 RDlKPENILLd~~GHi~LtDFgL~k~~~~~~---------------------------------~--------------- 180 (357)
T KOG0598|consen 149 RDLKPENILLDEQGHIKLTDFGLCKEDLKDG---------------------------------D--------------- 180 (357)
T ss_pred ccCCHHHeeecCCCcEEEeccccchhcccCC---------------------------------C---------------
Confidence 9999999999999999999999884321110 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.....+||+.|||||++.+.+|+.++|+|||||++|||
T Consensus 181 ------------------------------------------~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeM 218 (357)
T KOG0598|consen 181 ------------------------------------------ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEM 218 (357)
T ss_pred ------------------------------------------ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHH
Confidence 00115899999999999999999999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC----ChHHHHcCcccCCC-ccchHHHHH
Q 004998 305 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP----KMGELLQSEFLNEP-RDSMEEREA 376 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rp----ta~eiL~hp~~~~~-~~~l~e~~~ 376 (720)
++ ||...+.. .++..+.+...+....-..+...+|+.++|..||.+|. .+.+|-+||||... ++.+..++.
T Consensus 219 L~G~pPF~~~~~~-~~~~~I~~~k~~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~~k~l 297 (357)
T KOG0598|consen 219 LTGKPPFYAEDVK-KMYDKILKGKLPLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLLAKKL 297 (357)
T ss_pred hhCCCCCcCccHH-HHHHHHhcCcCCCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHHhcCC
Confidence 99 66665544 45555554432222111334556999999999999995 78999999999987 555666555
Q ss_pred HHHHhhhhhH
Q 004998 377 AIELREQIDE 386 (720)
Q Consensus 377 ~~~~~e~~~~ 386 (720)
.+++.+....
T Consensus 298 ~PpF~P~~~~ 307 (357)
T KOG0598|consen 298 SPPFKPNVTG 307 (357)
T ss_pred CCCeecCCCC
Confidence 5555554443
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=333.18 Aligned_cols=208 Identities=21% Similarity=0.301 Sum_probs=167.0
Q ss_pred ehhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
||+..|.+|+ |||||+|++++.+.+. .+|+||||+..+|.++++.+++.+++..++.|++||++||+|+|.+|+.|
T Consensus 57 REvksL~kln~hpniikL~Evi~d~~~---~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFH 133 (538)
T KOG0661|consen 57 REVKSLRKLNPHPNIIKLKEVIRDNDR---ILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFH 133 (538)
T ss_pred HHHHHHHhcCCCCcchhhHHHhhccCc---eEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 8888999999 9999999995555443 68999999999999999777888999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||+.....+||+|||+|+...+.
T Consensus 134 RDlKPENiLi~~~~~iKiaDFGLARev~Sk-------------------------------------------------- 163 (538)
T KOG0661|consen 134 RDLKPENILISGNDVIKIADFGLAREVRSK-------------------------------------------------- 163 (538)
T ss_pred ccCChhheEecccceeEecccccccccccC--------------------------------------------------
Confidence 999999999998899999888887543111
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~e 303 (720)
.| -+.++-|.||+|||+|.... |+.++||||+|||++|
T Consensus 164 ---------------------------------------pP--YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aE 202 (538)
T KOG0661|consen 164 ---------------------------------------PP--YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAE 202 (538)
T ss_pred ---------------------------------------CC--cchhhhcccccchHHhhhccccCCchHHHHHHHHHHH
Confidence 00 12368899999999987665 9999999999999999
Q ss_pred ccc--c-CCCCchHHHHHHHhh---cC-----------------CCCc-------c-ccccCchHHHHHHHcCCCCCCCC
Q 004998 304 LFC--P-FSTGEEKTRTMSSLR---HR-----------------VLPP-------Q-LLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 304 Llt--p-f~~~~~~~~~~~~l~---~~-----------------~~p~-------~-~~~~~p~~~~li~~~L~~dP~~R 352 (720)
+.+ | |++..+.++.++... .. .+|. . ++...++.++||.+||.+||.+|
T Consensus 203 l~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kR 282 (538)
T KOG0661|consen 203 LYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKR 282 (538)
T ss_pred HHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccC
Confidence 998 6 445455444433221 10 1111 1 12222344599999999999999
Q ss_pred CChHHHHcCcccCCC
Q 004998 353 PKMGELLQSEFLNEP 367 (720)
Q Consensus 353 pta~eiL~hp~~~~~ 367 (720)
|||.|+|+||||+..
T Consensus 283 pTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 283 PTASQALQHPFFQVG 297 (538)
T ss_pred ccHHHHhcCcccccc
Confidence 999999999999976
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-38 Score=334.20 Aligned_cols=216 Identities=18% Similarity=0.268 Sum_probs=172.3
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|...|.+| .||.||+||. -|+|+. .+|+|+|| .+|+|.++|++.+. |++..++.|+.||++||+|||++|||
T Consensus 122 ~Ek~~l~~L~~hPgivkLy~-TFQD~~---sLYFvLe~A~nGdll~~i~K~Gs-fde~caR~YAAeIldAleylH~~GII 196 (604)
T KOG0592|consen 122 REKEALTQLSGHPGIVKLYF-TFQDEE---SLYFVLEYAPNGDLLDLIKKYGS-FDETCARFYAAEILDALEYLHSNGII 196 (604)
T ss_pred HHHHHHHHhhCCCCeEEEEE-Eeeccc---ceEEEEEecCCCcHHHHHHHhCc-chHHHHHHHHHHHHHHHHHHHhcCce
Confidence 666778888 8999999999 677765 46999999 99999999977654 99999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||||+.+++++|.|||.++.++....... ++.
T Consensus 197 HRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~-------------------------------~~~---------- 235 (604)
T KOG0592|consen 197 HRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQE-------------------------------NPV---------- 235 (604)
T ss_pred eccCChhheeEcCCCcEEEeeccccccCChhhcccc-------------------------------Ccc----------
Confidence 999999999999999999999999976533211000 000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
. .... .. .....+||..|.+||+|.....++++|||+||||||.
T Consensus 236 --------~------------~~~a---------~s-------~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQ 279 (604)
T KOG0592|consen 236 --------D------------PNQA---------SS-------RRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQ 279 (604)
T ss_pred --------C------------cccc---------cC-------cccceeeeecccCHHHhcCCCCCcccchHHHHHHHHH
Confidence 0 0000 00 0123799999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc--CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+. ||...++. .+++.|.+ -.+|+.++ +...+|+.++|..||.+|+|+.+|.+||||...
T Consensus 280 mlaG~PPFra~Ney-liFqkI~~l~y~fp~~fp---~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~V 344 (604)
T KOG0592|consen 280 MLAGQPPFRAANEY-LIFQKIQALDYEFPEGFP---EDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGV 344 (604)
T ss_pred HhcCCCCCccccHH-HHHHHHHHhcccCCCCCC---HHHHHHHHHHHccCccccccHHHHhhCcccccC
Confidence 999 77776665 34444443 23444432 334499999999999999999999999999988
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=322.41 Aligned_cols=216 Identities=21% Similarity=0.250 Sum_probs=167.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.++|..+|++++|||||+++| ....... ..+++.||| .||+|.+++.+.+..+++..++.+.+||++||.|||++||
T Consensus 61 l~~Ei~iL~~l~~p~IV~~~G-~~~~~~~-~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~ 138 (313)
T KOG0198|consen 61 LEREIRILSRLNHPNIVQYYG-SSSSREN-DEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGI 138 (313)
T ss_pred HHHHHHHHHhCCCCCEEeeCC-ccccccC-eeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 358889999999999999999 3222222 368999999 9999999997665479999999999999999999999999
Q ss_pred eeccCCCCcEEEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 143 VVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 143 vHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|||||||+|||++. ++.+||+|||++........
T Consensus 139 vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~--------------------------------------------- 173 (313)
T KOG0198|consen 139 VHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT--------------------------------------------- 173 (313)
T ss_pred eccCcccceEEEeCCCCeEEeccCccccccccccc---------------------------------------------
Confidence 99999999999999 79999999998744321000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvl 300 (720)
.+.......||+.|||||++.++ ...+++|||||||+
T Consensus 174 ------------------------------------------~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCt 211 (313)
T KOG0198|consen 174 ------------------------------------------KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCT 211 (313)
T ss_pred ------------------------------------------cccccccccCCccccCchhhcCCCcCCccchhhhcCCE
Confidence 00001125799999999999853 24469999999999
Q ss_pred hhhccc---cCCC-CchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 301 LFELFC---PFST-GEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 301 l~eLlt---pf~~-~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+.||+| ||.. ................| .++...+.. .+|+.+||..||++||||.++|+|||+.....
T Consensus 212 VvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P-~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 212 VVEMLTGKPPWSEFFEEAEALLLIGREDSLP-EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred EEeccCCCCcchhhcchHHHHHHHhccCCCC-CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 999999 4544 22233344444444444 444445544 49999999999999999999999999987643
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=329.71 Aligned_cols=202 Identities=25% Similarity=0.383 Sum_probs=168.2
Q ss_pred ehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++.+++ ||||+++++ ++.... .+|+|||| .||+|.+++.+ ..++.+.+++.+|+||+.||+|||++||+
T Consensus 68 rEi~~~~~~~~HpnI~~l~e-v~~t~~---~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~ 142 (370)
T KOG0583|consen 68 REISILRRLRSHPNIIRLLE-VFATPT---KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIV 142 (370)
T ss_pred HHHHHHHHhccCCCEeEEEE-EEecCC---eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEe
Confidence 7888999999 999999999 666665 48999999 88999999976 44599999999999999999999999999
Q ss_pred eccCCCCcEEEccC-CceEEeccCcccCCC-CCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 144 VHNVRPSCFVMSSF-NHVSFIESASCSDSG-SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 144 HrDLKP~NILl~~~-~~vkliDfg~a~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||+|||++.+ +++||+|||++.... .+ ++
T Consensus 143 HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~----------------------------------~~----------- 177 (370)
T KOG0583|consen 143 HRDLKPENILLDGNEGNLKLSDFGLSAISPGED----------------------------------GL----------- 177 (370)
T ss_pred eCCCCHHHEEecCCCCCEEEeccccccccCCCC----------------------------------Cc-----------
Confidence 99999999999998 999999999884331 11 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-C-Cccccchhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-V-SCASDIYRLGV 299 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~-s~~sDIwSLGv 299 (720)
....+||+.|+|||++.+.. | +.++||||+||
T Consensus 178 ----------------------------------------------l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GV 211 (370)
T KOG0583|consen 178 ----------------------------------------------LKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGV 211 (370)
T ss_pred ----------------------------------------------ccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHH
Confidence 01158999999999999987 7 58999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
+||.|++ ||...... .+...+..+. +|..+. .++..+|+.+||.+||.+|+|+.+|+.||||+.
T Consensus 212 iLy~ml~G~~PF~d~~~~-~l~~ki~~~~~~~p~~~~--S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 212 ILYVLLCGRLPFDDSNVP-NLYRKIRKGEFKIPSYLL--SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred HHHHHHhCCCCCCCccHH-HHHHHHhcCCccCCCCcC--CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 9999999 67664443 3444455432 333333 667779999999999999999999999999997
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-37 Score=328.17 Aligned_cols=274 Identities=15% Similarity=0.178 Sum_probs=182.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+|...++|+||+||. .|++.. .+|||||| +||++..+|.+.+ .|++..++.|+.+++.|++.||+.|+||
T Consensus 190 aERdiL~~~ds~~vVKLyY-sFQD~~---~LYLiMEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH~~gyIH 264 (550)
T KOG0605|consen 190 AERDILAEVDSPWVVKLYY-SFQDKE---YLYLIMEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIHQLGYIH 264 (550)
T ss_pred HHHHHhhhcCCCcEEEEEE-EecCCC---eeEEEEEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHHHcCccc
Confidence 3444888899999999999 777776 67999999 9999999995554 4999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhh--hcccccccccccCCCCCCcc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR--TRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r--~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||+|+||+..|++||.|||+|..+......+... .++.... ......||.-..+ .
T Consensus 265 RDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~------~ 324 (550)
T KOG0605|consen 265 RDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYR--------------LDEQMQINLSEAKPSDFPKFNT------P 324 (550)
T ss_pred ccCChhheeecCCCCEeeccccccchhhhhhhhhhhc--------------chhhhhhhhccCCCcccccccc------c
Confidence 9999999999999999999999995432221110000 0000000 0000011100000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
... . -....-.........-.-..+|||.|||||++.+..|+..+|+||||||+|
T Consensus 325 ~~~----------------------~---~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~Imy 379 (550)
T KOG0605|consen 325 RST----------------------M---SRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMY 379 (550)
T ss_pred cch----------------------h---hHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHH
Confidence 000 0 000000111111111112369999999999999999999999999999999
Q ss_pred hccccCCCC--chHHHHHHHhhcCC----CCccccccCchHHHHHHHcCCCCCCCCC---ChHHHHcCcccCCC-ccchH
Q 004998 303 ELFCPFSTG--EEKTRTMSSLRHRV----LPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP-RDSME 372 (720)
Q Consensus 303 eLltpf~~~--~~~~~~~~~l~~~~----~p~~~~~~~p~~~~li~~~L~~dP~~Rp---ta~eiL~hp~~~~~-~~~l~ 372 (720)
|||.||+++ +....++..|.++. +|.. ....++..|||.+||. ||.+|. .+.||.+||||+.. ++.+-
T Consensus 380 EmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~-~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~l~ 457 (550)
T KOG0605|consen 380 EMLVGYPPFCSETPQETYRKIVNWRETLKFPEE-VDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDHLR 457 (550)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCc-CcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcchhh
Confidence 999955443 33345565555432 3332 2333555699999999 999996 69999999999988 45444
Q ss_pred HHHHHHHHhhhhhHHHHHHHH
Q 004998 373 EREAAIELREQIDEEELLLEF 393 (720)
Q Consensus 373 e~~~~~~~~e~~~~~e~L~~f 393 (720)
+.. .++.++..+......|
T Consensus 458 ~~~--apfvP~v~~~~DT~yF 476 (550)
T KOG0605|consen 458 EMP--APFVPQVNSELDTQYF 476 (550)
T ss_pred cCC--CCCCCCCCCccccccc
Confidence 433 4444444443333333
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-37 Score=316.07 Aligned_cols=226 Identities=18% Similarity=0.222 Sum_probs=172.9
Q ss_pred cceeeeehhhhcccCCCCCceecccceee-cCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 60 FELRKHSDGVELTHGDHLRNQGGLSGVCE-NEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 60 ~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~-~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
..-|..||..+|.+++|+||+.+++++-. ......-+|+|+|+++.+|.+.|+.. ..+++..+..+++||+.||.|+|
T Consensus 64 ~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMetDL~~iik~~-~~L~d~H~q~f~YQiLrgLKyiH 142 (359)
T KOG0660|consen 64 DAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELMETDLHQIIKSQ-QDLTDDHAQYFLYQILRGLKYIH 142 (359)
T ss_pred HHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHHhhHHHHHHHcC-ccccHHHHHHHHHHHHHhcchhh
Confidence 34477799999999999999999994443 23345569999999999999999554 44999999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.||+||||||+|+|++.+..+|++|||+|+...... . .+|
T Consensus 143 SAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~-~------------------------------~~~-------- 183 (359)
T KOG0660|consen 143 SANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFF-E------------------------------DGF-------- 183 (359)
T ss_pred cccccccccchhheeeccCCCEEeccccceeeccccC-c------------------------------ccc--------
Confidence 9999999999999999999999998888875432110 0 000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSL 297 (720)
-+.++.|.||+|||++... .|+.+.||||+
T Consensus 184 -------------------------------------------------mTeYVaTRWYRAPElll~~~~Yt~aiDiWSv 214 (359)
T KOG0660|consen 184 -------------------------------------------------MTEYVATRWYRAPELLLNSSEYTKAIDIWSV 214 (359)
T ss_pred -------------------------------------------------hhcceeeeeecCHHHHhccccccchhhhhhh
Confidence 1236889999999998654 49999999999
Q ss_pred hhhhhhccc--cCCCCchHHHHHH------------------------Hhhc-CCCC-----ccccccCchHHHHHHHcC
Q 004998 298 GVLLFELFC--PFSTGEEKTRTMS------------------------SLRH-RVLP-----PQLLLKFPKEASFCLWLL 345 (720)
Q Consensus 298 Gvll~eLlt--pf~~~~~~~~~~~------------------------~l~~-~~~p-----~~~~~~~p~~~~li~~~L 345 (720)
||||.||++ |..+.......+. .+.. ...| ..++...|...+|+.+||
T Consensus 215 GCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL 294 (359)
T KOG0660|consen 215 GCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKML 294 (359)
T ss_pred hHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHh
Confidence 999999999 4322211111111 1111 1111 123345566679999999
Q ss_pred CCCCCCCCChHHHHcCcccCCCccchHHH
Q 004998 346 HPEPSGRPKMGELLQSEFLNEPRDSMEER 374 (720)
Q Consensus 346 ~~dP~~Rpta~eiL~hp~~~~~~~~l~e~ 374 (720)
..||.+|+|++|+|+|||+....++-.|.
T Consensus 295 ~fdP~kRita~eAL~hPYl~~~hdp~dEP 323 (359)
T KOG0660|consen 295 VFDPKKRITAEEALAHPYLAPYHDPEDEP 323 (359)
T ss_pred ccCccccCCHHHHhcChhhhhhcCCccCC
Confidence 99999999999999999999998876664
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-36 Score=325.47 Aligned_cols=228 Identities=17% Similarity=0.241 Sum_probs=178.9
Q ss_pred CCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCC
Q 004998 41 NPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVD 119 (720)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~ 119 (720)
+...++++++.+++-....-.| .|..+|...+|+|||.+++.+... ..+|+|||| .||+|.+.+.... ++
T Consensus 297 ~~~~VaiK~m~l~~Q~~keLil---nEi~Vm~~~~H~NiVnfl~Sylv~----deLWVVMEym~ggsLTDvVt~~~--~~ 367 (550)
T KOG0578|consen 297 TKQEVAIKRMDLRKQPKKELLL---NEILVMRDLHHPNIVNFLDSYLVG----DELWVVMEYMEGGSLTDVVTKTR--MT 367 (550)
T ss_pred CCceEEEEEEEeccCCchhhhH---HHHHHHHhccchHHHHHHHHhccc----ceeEEEEeecCCCchhhhhhccc--cc
Confidence 3444555665555443222111 788899999999999999954444 257999999 9999999885443 99
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhH
Q 004998 120 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 199 (720)
Q Consensus 120 ~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (720)
|.++..|+++++.||+|||.+||||||||.+|||+..+|.+||+|||+|..+....
T Consensus 368 E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~------------------------ 423 (550)
T KOG0578|consen 368 EGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ------------------------ 423 (550)
T ss_pred HHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeecccccc------------------------
Confidence 99999999999999999999999999999999999999999999999994431110
Q ss_pred hhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccC
Q 004998 200 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 279 (720)
Q Consensus 200 ~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 279 (720)
.+....+|||+|||
T Consensus 424 ------------------------------------------------------------------~KR~TmVGTPYWMA 437 (550)
T KOG0578|consen 424 ------------------------------------------------------------------SKRSTMVGTPYWMA 437 (550)
T ss_pred ------------------------------------------------------------------CccccccCCCCccc
Confidence 01223699999999
Q ss_pred CccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCCh
Q 004998 280 PEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKM 355 (720)
Q Consensus 280 PE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta 355 (720)
||++....|++++||||||+++.||+- ||....+..+.+....++.+.-..+... +...+|+.+||..||.+|++|
T Consensus 438 PEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA 517 (550)
T KOG0578|consen 438 PEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASA 517 (550)
T ss_pred hhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCH
Confidence 999999999999999999999999998 7777655544444433444433333333 455699999999999999999
Q ss_pred HHHHcCcccCCC
Q 004998 356 GELLQSEFLNEP 367 (720)
Q Consensus 356 ~eiL~hp~~~~~ 367 (720)
.|+|+||||+..
T Consensus 518 ~eLL~HpFl~~a 529 (550)
T KOG0578|consen 518 KELLEHPFLKMA 529 (550)
T ss_pred HHHhcChhhhhc
Confidence 999999999554
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-36 Score=318.59 Aligned_cols=233 Identities=18% Similarity=0.232 Sum_probs=174.2
Q ss_pred CCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHH
Q 004998 43 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYE 122 (720)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~ 122 (720)
..++-+|+.+...... +.+=..||+.||.+|+|||||+|.+.+... ....+|+|+||+..+|.-++..++-.|++.+
T Consensus 143 kivALKKvr~d~~~~~-~~~t~~REI~ILr~l~HpNIikL~eivt~~--~~~siYlVFeYMdhDL~GLl~~p~vkft~~q 219 (560)
T KOG0600|consen 143 KIVALKKVRFDNEKEG-FPITAIREIKILRRLDHPNIIKLEEIVTSK--LSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQ 219 (560)
T ss_pred cEEEEEEeecccCCCc-chHHHHHHHHHHHhcCCCcccceeeEEEec--CCceEEEEEecccchhhhhhcCCCcccChHH
Confidence 3345555555443221 112233899999999999999999966655 1226899999999999999988777899999
Q ss_pred HHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhh
Q 004998 123 CLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR 202 (720)
Q Consensus 123 ~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 202 (720)
++.|++||+.||+|||++||+|||||.+||||+.+|.+||+|||+|+.+.....
T Consensus 220 IKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~-------------------------- 273 (560)
T KOG0600|consen 220 IKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGS-------------------------- 273 (560)
T ss_pred HHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCC--------------------------
Confidence 999999999999999999999999999999999999999988777754322100
Q ss_pred hcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcc
Q 004998 203 TRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEE 282 (720)
Q Consensus 203 ~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 282 (720)
.+ -+..+-|.||+|||+
T Consensus 274 -------------------------------------------------------------~~--~T~rVvTLWYRpPEL 290 (560)
T KOG0600|consen 274 -------------------------------------------------------------AP--YTSRVVTLWYRPPEL 290 (560)
T ss_pred -------------------------------------------------------------cc--cccceEEeeccChHH
Confidence 00 122577999999999
Q ss_pred ccCCC-CCccccchhhhhhhhhccc--c-CCCCchHHHHHHHhhc-CCCCccccc-------------------------
Q 004998 283 LAGAP-VSCASDIYRLGVLLFELFC--P-FSTGEEKTRTMSSLRH-RVLPPQLLL------------------------- 332 (720)
Q Consensus 283 l~~~~-~s~~sDIwSLGvll~eLlt--p-f~~~~~~~~~~~~l~~-~~~p~~~~~------------------------- 332 (720)
|.|.. |++++|+||.||||.||+. | |.+..+..+......- +.+.+..+.
T Consensus 291 LLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~ 370 (560)
T KOG0600|consen 291 LLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFK 370 (560)
T ss_pred hcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhc
Confidence 99987 9999999999999999999 4 4444444333322221 111111000
Q ss_pred cC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 333 KF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 333 ~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.. +...+|+..||..||.+|.||.++|+|+||...
T Consensus 371 ~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~ 406 (560)
T KOG0600|consen 371 DFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTE 406 (560)
T ss_pred cCCHHHHHHHHHHhccCccccccHHHHhcCcccccC
Confidence 11 223499999999999999999999999999554
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-36 Score=290.16 Aligned_cols=208 Identities=19% Similarity=0.237 Sum_probs=166.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..++|+.|-..|.|||||+|.+.+-+. ...|+|+|+ .|++|..-|-+. -.+++..+.++++||+++|+|+|.+|
T Consensus 56 ~l~rEarIC~~LqHP~IvrL~~ti~~~----~~~ylvFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~ 130 (355)
T KOG0033|consen 56 KLEREARICRKLQHPNIVRLHDSIQEE----SFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNG 130 (355)
T ss_pred HHHHHHHHHHhcCCCcEeehhhhhccc----ceeEEEEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 344888888899999999999933332 267999999 999998777333 23799999999999999999999999
Q ss_pred ceeccCCCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|||||+||+|+|+-+ ..-+||+|||++.+.+..
T Consensus 131 IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g-------------------------------------------- 166 (355)
T KOG0033|consen 131 IVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG-------------------------------------------- 166 (355)
T ss_pred ceeccCChhheeeeeccCCCceeecccceEEEeCCc--------------------------------------------
Confidence 999999999999963 335889888888554311
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
... .| .+|||.|||||++...+|+..+|||+.|
T Consensus 167 ----------~~~------------------~G-------------------~~GtP~fmaPEvvrkdpy~kpvDiW~cG 199 (355)
T KOG0033|consen 167 ----------EAW------------------HG-------------------FAGTPGYLSPEVLKKDPYSKPVDIWACG 199 (355)
T ss_pred ----------ccc------------------cc-------------------ccCCCcccCHHHhhcCCCCCcchhhhhh
Confidence 000 11 5899999999999999999999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCC--CCc-cccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPP-QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~-~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+||-||. ||.+... ...+..|..+. +|+ .+....|...+|+.+||..||.+|.|+.|+|+|||+.+.
T Consensus 200 ViLfiLL~G~~PF~~~~~-~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r 273 (355)
T KOG0033|consen 200 VILYILLVGYPPFWDEDQ-HRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNR 273 (355)
T ss_pred HHHHHHHhCCCCCCCccH-HHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcch
Confidence 99999999 5655333 35666666543 333 455555666699999999999999999999999999985
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=300.89 Aligned_cols=213 Identities=15% Similarity=0.220 Sum_probs=174.7
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+|..+.||.++++++ .+.+.. .+|+|||| +||.|..+|++.++ +++..++.|+.||+.||+|||+.+|++
T Consensus 93 nEk~vL~~v~~PFlv~l~~-t~~d~~---~lymvmeyv~GGElFS~Lrk~~r-F~e~~arFYAAeivlAleylH~~~iiY 167 (355)
T KOG0616|consen 93 NEKRVLKAVSHPFLVKLYG-TFKDNS---NLYMVMEYVPGGELFSYLRKSGR-FSEPHARFYAAEIVLALEYLHSLDIIY 167 (355)
T ss_pred hHHHHHhhccCceeEEEEE-eeccCC---eEEEEEeccCCccHHHHHHhcCC-CCchhHHHHHHHHHHHHHHHHhcCeee
Confidence 6778999999999999999 454443 68999999 99999999977655 999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+.+|++||+|||+|+....
T Consensus 168 RDLKPENiLlD~~G~iKitDFGFAK~v~~--------------------------------------------------- 196 (355)
T KOG0616|consen 168 RDLKPENLLLDQNGHIKITDFGFAKRVSG--------------------------------------------------- 196 (355)
T ss_pred ccCChHHeeeccCCcEEEEeccceEEecC---------------------------------------------------
Confidence 99999999999999999998888732100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
..-..+|||.|+|||++...+|..++|.|||||++|||
T Consensus 197 ------------------------------------------rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEM 234 (355)
T KOG0616|consen 197 ------------------------------------------RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEM 234 (355)
T ss_pred ------------------------------------------cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHH
Confidence 00126899999999999999999999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCC--CCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC-ccchHH
Q 004998 305 FC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP-RDSMEE 373 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~-~~~l~e 373 (720)
+. ||...++ ..++..|..+. +|+.+ .+...+|+..+|+.|-.+|. ...+|..||||+.. +..+..
T Consensus 235 laG~pPF~~~~~-~~iY~KI~~~~v~fP~~f---s~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~~ 310 (355)
T KOG0616|consen 235 LAGYPPFYDDNP-IQIYEKILEGKVKFPSYF---SSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAILQ 310 (355)
T ss_pred HcCCCCCcCCCh-HHHHHHHHhCcccCCccc---CHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHhh
Confidence 99 5665555 46666666543 44443 35667999999999999993 57899999999986 445555
Q ss_pred HHHHHHH
Q 004998 374 REAAIEL 380 (720)
Q Consensus 374 ~~~~~~~ 380 (720)
++-..++
T Consensus 311 r~ie~P~ 317 (355)
T KOG0616|consen 311 RKIEPPF 317 (355)
T ss_pred ccccCCC
Confidence 4443343
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-36 Score=308.91 Aligned_cols=226 Identities=19% Similarity=0.270 Sum_probs=180.1
Q ss_pred CCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHH
Q 004998 43 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVY 121 (720)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~ 121 (720)
+.++++-|.-..-.+.....+..||+.|++.|+||||+++|. +|+..+ .+.||||| .+|.|.+|+...+ .|++.
T Consensus 79 R~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyE-VFENkd---KIvivMEYaS~GeLYDYiSer~-~LsEr 153 (668)
T KOG0611|consen 79 REVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYE-VFENKD---KIVIVMEYASGGELYDYISERG-SLSER 153 (668)
T ss_pred cEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhh-hhcCCc---eEEEEEEecCCccHHHHHHHhc-cccHH
Confidence 334444444333344445556668888999999999999999 666655 57999999 9999999995554 49999
Q ss_pred HHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhh
Q 004998 122 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 122 ~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (720)
+++++|+||+.||.|+|.++|+|||||.+|||++.++++||+|||++-.+...
T Consensus 154 EaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~--------------------------- 206 (668)
T KOG0611|consen 154 EARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK--------------------------- 206 (668)
T ss_pred HHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc---------------------------
Confidence 99999999999999999999999999999999999999999988887322111
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCc
Q 004998 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 281 (720)
.| -..++|+|-|.+||
T Consensus 207 -------kf---------------------------------------------------------LqTFCGSPLYASPE 222 (668)
T KOG0611|consen 207 -------KF---------------------------------------------------------LQTFCGSPLYASPE 222 (668)
T ss_pred -------cH---------------------------------------------------------HHHhcCCcccCCcc
Confidence 01 01258999999999
Q ss_pred cccCCCC-Cccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHH
Q 004998 282 ELAGAPV-SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 357 (720)
Q Consensus 282 ~l~~~~~-s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~e 357 (720)
+++|.+| ++.+|-|||||+||.|+. ||++.+.. .+...|..+.+.... .-++...||+|||..||.+|.|+.+
T Consensus 223 IvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk-~lvrQIs~GaYrEP~--~PSdA~gLIRwmLmVNP~RRATieD 299 (668)
T KOG0611|consen 223 IVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK-RLVRQISRGAYREPE--TPSDASGLIRWMLMVNPERRATIED 299 (668)
T ss_pred ccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH-HHHHHhhcccccCCC--CCchHHHHHHHHHhcCcccchhHHH
Confidence 9999997 799999999999999998 89887665 555666665543321 1244569999999999999999999
Q ss_pred HHcCcccCCC
Q 004998 358 LLQSEFLNEP 367 (720)
Q Consensus 358 iL~hp~~~~~ 367 (720)
|..|=|++-.
T Consensus 300 iAsHWWvNwg 309 (668)
T KOG0611|consen 300 IASHWWVNWG 309 (668)
T ss_pred Hhhhheeecc
Confidence 9999888743
|
|
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-36 Score=311.15 Aligned_cols=213 Identities=16% Similarity=0.254 Sum_probs=164.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+.|+.+|+.++|||||++++ ++++++ .+|+|||| .||+|.+||++.++ +++..++.++.||+.||++||+++||
T Consensus 57 ~~Ei~iLkel~H~nIV~l~d-~~~~~~---~i~lVMEyC~gGDLs~yi~~~~~-l~e~t~r~Fm~QLA~alq~L~~~~Ii 131 (429)
T KOG0595|consen 57 LSEIKILKELKHPNIVRLLD-CIEDDD---FIYLVMEYCNGGDLSDYIRRRGR-LPEATARHFMQQLASALQFLHENNII 131 (429)
T ss_pred HHHHHHHHhcCCcceeeEEE-EEecCC---eEEEEEEeCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 48899999999999999999 666665 68999999 89999999976654 99999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||.||||+........ ..+|++|||+|+......
T Consensus 132 HRDLKPQNiLLs~~~~~~~~---------------------------------------~~LKIADFGfAR~L~~~~--- 169 (429)
T KOG0595|consen 132 HRDLKPQNILLSTTARNDTS---------------------------------------PVLKIADFGFARFLQPGS--- 169 (429)
T ss_pred eccCCcceEEeccCCCCCCC---------------------------------------ceEEecccchhhhCCchh---
Confidence 99999999999864110000 123445666555433210
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
-....+|+|.|||||+++...|+.++|+||+|+|||+
T Consensus 170 -------------------------------------------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq 206 (429)
T KOG0595|consen 170 -------------------------------------------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQ 206 (429)
T ss_pred -------------------------------------------HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHH
Confidence 0012689999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc-CCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRH-RVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~-~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|++ ||...... +....+.. ....+.+.. ..+...+|+..+|..+|.+|.+..+.+.|+++....
T Consensus 207 ~l~g~~Pf~a~t~~-eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p 275 (429)
T KOG0595|consen 207 CLTGKPPFDAETPK-ELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANP 275 (429)
T ss_pred HHhCCCCccccCHH-HHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence 999 56554443 33334443 223333333 334445999999999999999999999999998763
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-35 Score=304.79 Aligned_cols=272 Identities=15% Similarity=0.160 Sum_probs=185.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
|...|..||+.++||.++.||. .++.+. ..|++||| .||+|...+ +++++.+++..++.|+..|+.||+|||-.
T Consensus 123 Ra~tE~eIL~~lDHPFlPTLYa-~fet~~---~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml 198 (459)
T KOG0610|consen 123 RAQTEREILSLLDHPFLPTLYA-SFETDK---YSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML 198 (459)
T ss_pred HHHHHHHHHHhcCCCccchhhh-eeeccc---eeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh
Confidence 6678899999999999999999 665554 67999999 999999988 56677799999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCC-CCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS-DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|||.|||||+||||.++|+|.|+||.++..... +.+- ...+..+.............-|.+.......
T Consensus 199 GivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~-----------~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~ 267 (459)
T KOG0610|consen 199 GIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLV-----------KSSSPRSSGSQPSCRSRQPSCFSPRCLSSSK 267 (459)
T ss_pred ceeeccCCcceeEEecCCcEEeeeccccccCCCCCeee-----------ccCCCCCCCCCcccccccccccccchhcccc
Confidence 999999999999999999999999999854311 1000 0000000000000000000111100000000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
... . ...... +...+... .....+....+||-.|+|||++.|...+.++|+|+|||
T Consensus 268 ~~~------------------k--~~~~~~-~~~p~~~a---ep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGI 323 (459)
T KOG0610|consen 268 KRK------------------K--KDESAS-RSLPELVA---EPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGI 323 (459)
T ss_pred ccc------------------c--cccccc-ccchhhhc---CCCCccccccccccccccceeeecCCCCchhhHHHHHH
Confidence 000 0 000000 00011100 11112334589999999999999999999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC----hHHHHcCcccCCCccchH
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK----MGELLQSEFLNEPRDSME 372 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt----a~eiL~hp~~~~~~~~l~ 372 (720)
+|||||. ||.+.+........+.+...-|..+.......|||+++|.+||++|.. |.||.+||||.+..-.+.
T Consensus 324 flYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLi 403 (459)
T KOG0610|consen 324 FLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALI 403 (459)
T ss_pred HHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhhe
Confidence 9999997 999887775555555443322332233345559999999999999987 999999999999865544
Q ss_pred H
Q 004998 373 E 373 (720)
Q Consensus 373 e 373 (720)
.
T Consensus 404 r 404 (459)
T KOG0610|consen 404 R 404 (459)
T ss_pred e
Confidence 3
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-35 Score=299.35 Aligned_cols=235 Identities=18% Similarity=0.229 Sum_probs=180.2
Q ss_pred CCCCCccccccccccCCCCccce--eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCC
Q 004998 40 RNPRLLRGERFGVRGDDSNDFEL--RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRS 117 (720)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~--r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~ 117 (720)
++.+-++-+|+....+ ...| -.-||+.+|.+++|||||.+-.++.. .+...+|+||||...+|..+|..-..+
T Consensus 99 ~t~eIVALKr~kmeke---k~GFPItsLREIniLl~~~H~NIV~vkEVVvG--~~~d~iy~VMe~~EhDLksl~d~m~q~ 173 (419)
T KOG0663|consen 99 KTDEIVALKRLKMEKE---KEGFPITSLREINILLKARHPNIVEVKEVVVG--SNMDKIYIVMEYVEHDLKSLMETMKQP 173 (419)
T ss_pred CcceeEEeeecccccc---cCCCcchhHHHHHHHHhcCCCCeeeeEEEEec--cccceeeeeHHHHHhhHHHHHHhccCC
Confidence 4444455555555442 2333 23388999999999999999995543 334469999999889999999777778
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchh
Q 004998 118 VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 197 (720)
Q Consensus 118 l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (720)
+...+++.++.|++.||.|||.+.|+||||||+|+|++..|.+|++|||+|+.+|.+..
T Consensus 174 F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k--------------------- 232 (419)
T KOG0663|consen 174 FLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLK--------------------- 232 (419)
T ss_pred CchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCcc---------------------
Confidence 99999999999999999999999999999999999999999999999999987766510
Q ss_pred hHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcc
Q 004998 198 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 277 (720)
Q Consensus 198 ~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y 277 (720)
.-+..+-|.||
T Consensus 233 ---------------------------------------------------------------------~~T~lVVTLWY 243 (419)
T KOG0663|consen 233 ---------------------------------------------------------------------PYTPLVVTLWY 243 (419)
T ss_pred ---------------------------------------------------------------------cCcceEEEeee
Confidence 01235779999
Q ss_pred cCCccccCCC-CCccccchhhhhhhhhccc--c-CCCCchHHHHHHHhhc------CCCC--------------cc----
Q 004998 278 ASPEELAGAP-VSCASDIYRLGVLLFELFC--P-FSTGEEKTRTMSSLRH------RVLP--------------PQ---- 329 (720)
Q Consensus 278 ~APE~l~~~~-~s~~sDIwSLGvll~eLlt--p-f~~~~~~~~~~~~l~~------~~~p--------------~~---- 329 (720)
+|||++.|.. |++++|+||+|||+.||++ | |++..+..+....+.- .+.| ..
T Consensus 244 RaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~ 323 (419)
T KOG0663|consen 244 RAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNN 323 (419)
T ss_pred cCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchh
Confidence 9999999987 9999999999999999999 5 4444444333333221 1111 00
Q ss_pred ----cccc-C-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 330 ----LLLK-F-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 330 ----~~~~-~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+... . ....+|+..+|.+||.+|.||.|.|+|+||.+...
T Consensus 324 lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~ 369 (419)
T KOG0663|consen 324 LRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPL 369 (419)
T ss_pred hhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCC
Confidence 1001 1 12248999999999999999999999999998644
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-35 Score=290.52 Aligned_cols=234 Identities=15% Similarity=0.206 Sum_probs=180.4
Q ss_pred CCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCH
Q 004998 41 NPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDV 120 (720)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~ 120 (720)
+.+.++.++|... .....-.+-.-||+..|..++||||+.+.+ +|.... .+-+|+||...+|...|+.....++.
T Consensus 26 t~~~VAIKKIkl~-~~kdGi~~talREIK~Lqel~h~nIi~LiD-~F~~~~---~l~lVfEfm~tdLe~vIkd~~i~l~p 100 (318)
T KOG0659|consen 26 TGKRVAIKKIKLG-NAKDGINRTALREIKLLQELKHPNIIELID-VFPHKS---NLSLVFEFMPTDLEVVIKDKNIILSP 100 (318)
T ss_pred CCcEEEEEEeecc-ccccCccHHHHHHHHHHHHccCcchhhhhh-hccCCC---ceEEEEEeccccHHHHhcccccccCH
Confidence 4444566666554 222222334448899999999999999999 444433 46899999999999999888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHh
Q 004998 121 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 200 (720)
Q Consensus 121 ~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (720)
.+++.|+.+++.||+|||++.|+||||||.|+||+++|.+|++|||+++.+|.+...
T Consensus 101 a~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~----------------------- 157 (318)
T KOG0659|consen 101 ADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI----------------------- 157 (318)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc-----------------------
Confidence 999999999999999999999999999999999999999999999999777655211
Q ss_pred hhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCC
Q 004998 201 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 280 (720)
Q Consensus 201 ~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 280 (720)
.+..+-|.||+||
T Consensus 158 -------------------------------------------------------------------~~~~V~TRWYRAP 170 (318)
T KOG0659|consen 158 -------------------------------------------------------------------QTHQVVTRWYRAP 170 (318)
T ss_pred -------------------------------------------------------------------cccceeeeeccCh
Confidence 0113569999999
Q ss_pred ccccCCC-CCccccchhhhhhhhhccc--cCCCCchHHHHHHHh-hc-CC--------------------CCcc-----c
Q 004998 281 EELAGAP-VSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSL-RH-RV--------------------LPPQ-----L 330 (720)
Q Consensus 281 E~l~~~~-~s~~sDIwSLGvll~eLlt--pf~~~~~~~~~~~~l-~~-~~--------------------~p~~-----~ 330 (720)
|.+.|.. |+..+||||.|||+.||+- ||.+.+...+.+..+ +. +. +|.. +
T Consensus 171 ELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf 250 (318)
T KOG0659|consen 171 ELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLF 250 (318)
T ss_pred HHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCcccccc
Confidence 9999987 9999999999999999998 876654433333222 21 10 1111 1
Q ss_pred cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 331 LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 331 ~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
....++..||+..||.+||.+|+|+.|+|+|+||+....
T Consensus 251 ~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~ 289 (318)
T KOG0659|consen 251 PAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPL 289 (318)
T ss_pred ccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCC
Confidence 122234459999999999999999999999999997533
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=312.50 Aligned_cols=207 Identities=19% Similarity=0.232 Sum_probs=165.5
Q ss_pred ceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 61 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 61 ~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.....+|..+|++++|||||+++| ++..... .+++|||| .+|+|.++|.+ ..+.++...+..|+.||+.|+.|||
T Consensus 83 ~~~f~~E~~il~~l~HpNIV~f~G-~~~~~~~--~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH 159 (362)
T KOG0192|consen 83 RKAFRREASLLSRLRHPNIVQFYG-ACTSPPG--SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH 159 (362)
T ss_pred HHHHHHHHHHHHhCCCCCeeeEEE-EEcCCCC--ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh
Confidence 334558888999999999999999 5555432 47999999 99999999965 4667999999999999999999999
Q ss_pred HcC-ceeccCCCCcEEEccCC-ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 139 SQG-IVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 139 s~g-IvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
+++ ||||||||+|||++.++ ++||+|||+++......
T Consensus 160 ~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~----------------------------------------- 198 (362)
T KOG0192|consen 160 SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK----------------------------------------- 198 (362)
T ss_pred cCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc-----------------------------------------
Confidence 999 99999999999999997 99998888774321100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc--CCCCCccccc
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA--GAPVSCASDI 294 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~--~~~~s~~sDI 294 (720)
...+...||+.|||||++. ...|+.++||
T Consensus 199 -------------------------------------------------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~Dv 229 (362)
T KOG0192|consen 199 -------------------------------------------------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDV 229 (362)
T ss_pred -------------------------------------------------ccccCCCCCccccChhhhcCCCCcCCccchh
Confidence 0001146899999999999 5579999999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||+||||+| ||........+.....++..|+......+....|+.+||+.||..||+..+|+.
T Consensus 230 ySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 230 YSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred hhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 999999999999 898887743344444344444433334455569999999999999999999874
|
|
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-35 Score=305.91 Aligned_cols=216 Identities=19% Similarity=0.234 Sum_probs=168.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|+.+|+++.|||||+|++ +. ++.....+|||+|| ..|.+. |.......+++.+++.|+++++.||+|||.||||
T Consensus 156 ~~EIailKkl~H~nVV~LiE-vL-DDP~s~~~YlVley~s~G~v~-w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Qgii 232 (576)
T KOG0585|consen 156 RREIAILKKLHHPNVVKLIE-VL-DDPESDKLYLVLEYCSKGEVK-WCPPDKPELSEQQARKYLRDVVLGLEYLHYQGII 232 (576)
T ss_pred HHHHHHHHhcCCcCeeEEEE-ee-cCcccCceEEEEEeccCCccc-cCCCCcccccHHHHHHHHHHHHHHHHHHHhcCee
Confidence 38999999999999999999 44 55556689999999 666653 3422222389999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|+||+++|+|||.|||.+..+.....+ ++
T Consensus 233 HRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~-------------------------------~~------------- 268 (576)
T KOG0585|consen 233 HRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDE-------------------------------GS------------- 268 (576)
T ss_pred ccccchhheEEcCCCcEEeeccceeeecccCCcc-------------------------------cc-------------
Confidence 9999999999999999999999998543111000 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC----CCccccchhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGV 299 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~s~~sDIwSLGv 299 (720)
. . .-...+|||.|+|||.+.+.. .+.+.|||||||
T Consensus 269 -d-------------------~---------------------~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGV 307 (576)
T KOG0585|consen 269 -D-------------------D---------------------QLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGV 307 (576)
T ss_pred -H-------------------H---------------------HHhhcCCCccccchHhhcCCCCccccchhhhhhhhhh
Confidence 0 0 000148999999999998733 478999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+||-|+. ||...... ..+..|.+ ...-|......+...+||++||.+||.+|.++.+|..|||.....+
T Consensus 308 TLYCllfG~~PF~~~~~~-~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g~ 380 (576)
T KOG0585|consen 308 TLYCLLFGQLPFFDDFEL-ELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDGD 380 (576)
T ss_pred hHHHhhhccCCcccchHH-HHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccCCC
Confidence 9999998 88887666 44444444 3334444445666679999999999999999999999999998733
|
|
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-35 Score=289.38 Aligned_cols=231 Identities=16% Similarity=0.153 Sum_probs=176.2
Q ss_pred CCCCccccccccccCCCCccc---eeee--ehhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC
Q 004998 41 NPRLLRGERFGVRGDDSNDFE---LRKH--SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK 113 (720)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~---~r~~--~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~ 113 (720)
+....+++.+...+.+..... .|++ +|..||.+ ..||+|+.+.+ +|+.+. .+++|+|+ ..|.|.++|..
T Consensus 41 t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D-~yes~s---F~FlVFdl~prGELFDyLts 116 (411)
T KOG0599|consen 41 TGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQD-VYESDA---FVFLVFDLMPRGELFDYLTS 116 (411)
T ss_pred cccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeee-eccCcc---hhhhhhhhcccchHHHHhhh
Confidence 444455555555544443322 3444 67778888 67999999999 777765 57999999 89999999954
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCC
Q 004998 114 PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSP 193 (720)
Q Consensus 114 ~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~ 193 (720)
. -.+++.+.+.|++||++|+.|||.++||||||||+|||++++.+++|.|||+++.....+
T Consensus 117 ~-VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~Ge------------------ 177 (411)
T KOG0599|consen 117 K-VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGE------------------ 177 (411)
T ss_pred h-eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCch------------------
Confidence 4 349999999999999999999999999999999999999999999999999885432110
Q ss_pred CchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcccccccc
Q 004998 194 LPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME 273 (720)
Q Consensus 194 ~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~G 273 (720)
+-...+|
T Consensus 178 -------------------------------------------------------------------------kLrelCG 184 (411)
T KOG0599|consen 178 -------------------------------------------------------------------------KLRELCG 184 (411)
T ss_pred -------------------------------------------------------------------------hHHHhcC
Confidence 1123689
Q ss_pred CCcccCCccccC------CCCCccccchhhhhhhhhccccCCCCchHH--HHHHHhhcCCC---CccccccCchHHHHHH
Q 004998 274 TNWYASPEELAG------APVSCASDIYRLGVLLFELFCPFSTGEEKT--RTMSSLRHRVL---PPQLLLKFPKEASFCL 342 (720)
Q Consensus 274 T~~Y~APE~l~~------~~~s~~sDIwSLGvll~eLltpf~~~~~~~--~~~~~l~~~~~---p~~~~~~~p~~~~li~ 342 (720)
||+|+|||.+.. ..|+..+|+|++|||||.||.+.+++-... .+...|..+.+ .|.+........+||.
T Consensus 185 TPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIs 264 (411)
T KOG0599|consen 185 TPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLIS 264 (411)
T ss_pred CCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHH
Confidence 999999999843 238999999999999999999555543322 22333444432 3444444455569999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCC
Q 004998 343 WLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+||+.||.+|.|++|+|+||||.+.
T Consensus 265 rlLqVdp~~Ritake~LaHpff~q~ 289 (411)
T KOG0599|consen 265 RLLQVDPTKRITAKEALAHPFFIQI 289 (411)
T ss_pred HHHeeCchhcccHHHHhcChHHHHH
Confidence 9999999999999999999999764
|
|
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=331.73 Aligned_cols=264 Identities=23% Similarity=0.313 Sum_probs=200.9
Q ss_pred CcccccccccC-------CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCC----------
Q 004998 29 SRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEA---------- 91 (720)
Q Consensus 29 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~---------- 91 (720)
...||.|+|+. -+.+..+++||...+ +.....+..+|+.+|++|+|||||+||..|.+...
T Consensus 484 L~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~--s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~ 561 (1351)
T KOG1035|consen 484 LELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA--SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVAS 561 (1351)
T ss_pred HHHhcCCCCceEEEEeecccchhhhhhhccCch--HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccccccc
Confidence 34667777776 455677888888877 33333455589999999999999999986654100
Q ss_pred --------------------------------------------------------------------------------
Q 004998 92 -------------------------------------------------------------------------------- 91 (720)
Q Consensus 92 -------------------------------------------------------------------------------- 91 (720)
T Consensus 562 ~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~ 641 (1351)
T KOG1035|consen 562 DSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVI 641 (1351)
T ss_pred chhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccc
Confidence
Q ss_pred -------------------------CCCcEEEEEecCCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 92 -------------------------AIDPFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 92 -------------------------~~~~~~lv~E~~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
....+||-|||+.-+|.+++ +.+...-.....+++|+||++||.|+|++|||||
T Consensus 642 ~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHR 721 (1351)
T KOG1035|consen 642 LDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHR 721 (1351)
T ss_pred cCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeec
Confidence 00236999999555555555 4333211578999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||.||+|+++++|||.|||++...-.. .+++.+... ...
T Consensus 722 DLKP~NIFLd~~~~VKIGDFGLAt~~~~~---------------------------------~~~~d~~~~-----~~~- 762 (1351)
T KOG1035|consen 722 DLKPRNIFLDSRNSVKIGDFGLATDLKEN---------------------------------LESIDQDLS-----FST- 762 (1351)
T ss_pred cCCcceeEEcCCCCeeecccccchhhhhh---------------------------------hhhHhhccC-----ccc-
Confidence 99999999999999999999988542100 000000000 000
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC---CCccccchhhhhhhh
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLLF 302 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwSLGvll~ 302 (720)
..........+..+||.-|+|||++.+.. |+.++|||||||+||
T Consensus 763 ---------------------------------~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlF 809 (1351)
T KOG1035|consen 763 ---------------------------------NRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLF 809 (1351)
T ss_pred ---------------------------------cccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHH
Confidence 00000011224479999999999997765 999999999999999
Q ss_pred hccccCCCCchHHHHHHHhhcCCCCcc---ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 303 ELFCPFSTGEEKTRTMSSLRHRVLPPQ---LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 303 eLltpf~~~~~~~~~~~~l~~~~~p~~---~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
||+.||.+..+...++..++.+.+|.. +.+..|.++.+|.|||..||.+||||.|+|++.||..
T Consensus 810 EM~yPF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp 876 (1351)
T KOG1035|consen 810 EMLYPFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP 876 (1351)
T ss_pred HHhccCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence 999999999999999999999999888 7888899999999999999999999999999999986
|
|
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-34 Score=293.76 Aligned_cols=239 Identities=18% Similarity=0.237 Sum_probs=176.7
Q ss_pred CCccccccccccCCCCccceeeeehhhhcccCCCCC-ceecccceeecCC--CCCcEEEEEecCCCCHHHHHhCCC---C
Q 004998 43 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLR-NQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPK---R 116 (720)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~Hpn-IV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~~~~---~ 116 (720)
..++.+++.+..+. +..-.-..||+-+|.+++|+| ||.+++++..... ....+++|+||...+|..++.... .
T Consensus 37 ~~VALKkirl~~~~-EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~ 115 (323)
T KOG0594|consen 37 KFVALKKIRLEFEE-EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQ 115 (323)
T ss_pred CEEEEEEEeccccc-cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeecccHHHHHHhcccccc
Confidence 34455555554332 111112237888999999999 9999994443331 233579999999899999996544 3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCch
Q 004998 117 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 196 (720)
Q Consensus 117 ~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 196 (720)
.++...++.+++||+.||+|||++||+||||||.||||+++|.+||+|||+++.++.+.-
T Consensus 116 g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~-------------------- 175 (323)
T KOG0594|consen 116 GLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMR-------------------- 175 (323)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcc--------------------
Confidence 588899999999999999999999999999999999999999999999998865433210
Q ss_pred hhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCc
Q 004998 197 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 276 (720)
Q Consensus 197 ~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~ 276 (720)
.-+..++|.|
T Consensus 176 ----------------------------------------------------------------------~yt~evvTlW 185 (323)
T KOG0594|consen 176 ----------------------------------------------------------------------TYTPEVVTLW 185 (323)
T ss_pred ----------------------------------------------------------------------cccccEEEee
Confidence 0122578999
Q ss_pred ccCCccccCCC-CCccccchhhhhhhhhccc--c-CCCCchHHHHHHHhhcCCCC-------------------cc----
Q 004998 277 YASPEELAGAP-VSCASDIYRLGVLLFELFC--P-FSTGEEKTRTMSSLRHRVLP-------------------PQ---- 329 (720)
Q Consensus 277 Y~APE~l~~~~-~s~~sDIwSLGvll~eLlt--p-f~~~~~~~~~~~~l~~~~~p-------------------~~---- 329 (720)
|+|||++.|.. |++.+||||+|||++||++ | |++..+........+.--.| ..
T Consensus 186 YRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~ 265 (323)
T KOG0594|consen 186 YRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPK 265 (323)
T ss_pred ccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCcc
Confidence 99999999985 9999999999999999999 4 55555544433333321111 00
Q ss_pred -c----cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccchH
Q 004998 330 -L----LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 330 -~----~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
+ ....+...+++.+||+++|.+|.|+..+|.||||........
T Consensus 266 ~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~~~~ 313 (323)
T KOG0594|consen 266 DLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPEKSS 313 (323)
T ss_pred chHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccccchh
Confidence 0 011134459999999999999999999999999998855433
|
|
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=308.52 Aligned_cols=231 Identities=17% Similarity=0.175 Sum_probs=192.0
Q ss_pred CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCC
Q 004998 40 RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVD 119 (720)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~ 119 (720)
+|...+++++..++|.-+....--...|+.+|.+++|||+|.+-+ +|..+. ..|+||||+-|+-.|+|.-...++.
T Consensus 49 ~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkg-CyLre~---TaWLVMEYClGSAsDlleVhkKplq 124 (948)
T KOG0577|consen 49 RNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKG-CYLREH---TAWLVMEYCLGSASDLLEVHKKPLQ 124 (948)
T ss_pred CccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccc-eeeccc---hHHHHHHHHhccHHHHHHHHhccch
Confidence 788888999999999887766666668888999999999999999 665553 4699999988899998866666799
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhH
Q 004998 120 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 199 (720)
Q Consensus 120 ~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (720)
+.++..|..+.+.||.|||+.+.||||||..|||+++.|.|||.|||.++....
T Consensus 125 EvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-------------------------- 178 (948)
T KOG0577|consen 125 EVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP-------------------------- 178 (948)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCc--------------------------
Confidence 999999999999999999999999999999999999999999999988733210
Q ss_pred hhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccC
Q 004998 200 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 279 (720)
Q Consensus 200 ~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 279 (720)
...++|||+|||
T Consensus 179 --------------------------------------------------------------------AnsFvGTPywMA 190 (948)
T KOG0577|consen 179 --------------------------------------------------------------------ANSFVGTPYWMA 190 (948)
T ss_pred --------------------------------------------------------------------hhcccCCccccc
Confidence 012689999999
Q ss_pred CccccC---CCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCC
Q 004998 280 PEELAG---APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGR 352 (720)
Q Consensus 280 PE~l~~---~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~li~~~L~~dP~~R 352 (720)
||++.. +.|+-++||||||++..||.- |++..+... +...|.....|.-..+.|++.. .|+..||++-|.+|
T Consensus 191 PEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMS-ALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeR 269 (948)
T KOG0577|consen 191 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQER 269 (948)
T ss_pred hhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHH-HHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccC
Confidence 999853 449999999999999999998 777666554 3444555555554556777665 99999999999999
Q ss_pred CChHHHHcCcccCCCcc
Q 004998 353 PKMGELLQSEFLNEPRD 369 (720)
Q Consensus 353 pta~eiL~hp~~~~~~~ 369 (720)
||.+++|.|+|+...+.
T Consensus 270 ptse~ll~H~fv~R~Rp 286 (948)
T KOG0577|consen 270 PTSEELLKHRFVLRERP 286 (948)
T ss_pred CcHHHHhhcchhccCCC
Confidence 99999999999987744
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-34 Score=299.68 Aligned_cols=234 Identities=16% Similarity=0.170 Sum_probs=175.7
Q ss_pred CCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCH
Q 004998 43 RLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDV 120 (720)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~ 120 (720)
..++++++.+-.-...-..+| +|...++.++|||||+++. .|..+. .+|+||.| .+|++.++|+. ....++|
T Consensus 52 e~VAIK~inLEkc~~~ld~l~--kE~~~msl~~HPNIv~~~~-sFvv~~---~LWvVmpfMa~GS~ldIik~~~~~Gl~E 125 (516)
T KOG0582|consen 52 EVVAIKIINLEKCNNDLDALR--KEVQTMSLIDHPNIVTYHC-SFVVDS---ELWVVMPFMAGGSLLDIIKTYYPDGLEE 125 (516)
T ss_pred CEEEEEEeehhhhhhhHHHHH--HHHHHhhhcCCCCcceEEE-EEEecc---eeEEeehhhcCCcHHHHHHHHccccccH
Confidence 444555555544333322333 4566888899999999999 554444 47999999 99999999943 3344999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHh
Q 004998 121 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 200 (720)
Q Consensus 121 ~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (720)
..+..|+++++.||+|||.+|-||||||+.||||+.+|.|||.|||.....
T Consensus 126 ~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l----------------------------- 176 (516)
T KOG0582|consen 126 ASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASL----------------------------- 176 (516)
T ss_pred HHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeee-----------------------------
Confidence 999999999999999999999999999999999999999999999876221
Q ss_pred hhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCC
Q 004998 201 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 280 (720)
Q Consensus 201 ~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 280 (720)
.|-|. + +. .+....+||++||||
T Consensus 177 -------~~~G~-R-----------------------------------------------~~--~rf~tfvgtp~wmAP 199 (516)
T KOG0582|consen 177 -------FDSGD-R-----------------------------------------------QV--TRFNTFVGTPCWMAP 199 (516)
T ss_pred -------cccCc-e-----------------------------------------------ee--EeeccccCcccccCh
Confidence 11110 0 00 000125899999999
Q ss_pred ccccCCC--CCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC--------ch-HHHHHHHcCC
Q 004998 281 EELAGAP--VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF--------PK-EASFCLWLLH 346 (720)
Q Consensus 281 E~l~~~~--~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~--------p~-~~~li~~~L~ 346 (720)
|++...- |++++||||||++..||.+ ||....+....+..+.+..+.+. .... ++ ...++..||.
T Consensus 200 Evl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~-t~~~~~d~~k~~~ksf~e~i~~CL~ 278 (516)
T KOG0582|consen 200 EVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLL-TSGLDKDEDKKFSKSFREMIALCLV 278 (516)
T ss_pred HHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcc-cccCChHHhhhhcHHHHHHHHHHhh
Confidence 9975543 9999999999999999999 88777776666666665433222 2222 22 2389999999
Q ss_pred CCCCCCCChHHHHcCcccCCCcc
Q 004998 347 PEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.||.+||||.++|.|+||+....
T Consensus 279 kDP~kRptAskLlkh~FFk~~k~ 301 (516)
T KOG0582|consen 279 KDPSKRPTASKLLKHAFFKKAKS 301 (516)
T ss_pred cCcccCCCHHHHhccHHHhhccc
Confidence 99999999999999999998744
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=307.94 Aligned_cols=206 Identities=20% Similarity=0.271 Sum_probs=168.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
+|+.|+..++|||||.+++ +|+... ++|+|.||.-|+|+.+|...+ .++++.++.|.+|++.||.|||+.+|+||
T Consensus 50 ~ev~i~r~lkHpniv~m~e-sfEt~~---~~~vVte~a~g~L~~il~~d~-~lpEe~v~~~a~~LVsaL~yLhs~rilhr 124 (808)
T KOG0597|consen 50 QEVRILRSLKHPNIVEMLE-SFETSA---HLWVVTEYAVGDLFTILEQDG-KLPEEQVRAIAYDLVSALYYLHSNRILHR 124 (808)
T ss_pred HHHHHHHhcCCcchhhHHH-hhcccc---eEEEEehhhhhhHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence 6777999999999999999 787775 679999996669999996555 49999999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
|+||.|||+...|.+|++|||+++..+... .
T Consensus 125 d~kPqniLl~~~~~~KlcdFg~Ar~m~~~t---------------------------------------------~---- 155 (808)
T KOG0597|consen 125 DMKPQNILLEKGGTLKLCDFGLARAMSTNT---------------------------------------------S---- 155 (808)
T ss_pred cCCcceeeecCCCceeechhhhhhhcccCc---------------------------------------------e----
Confidence 999999999999999998887774321110 0
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhcc
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 305 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLl 305 (720)
-.+...|||.|||||++.+.+|+..+|+||||||+|||+
T Consensus 156 -----------------------------------------vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~ 194 (808)
T KOG0597|consen 156 -----------------------------------------VLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELY 194 (808)
T ss_pred -----------------------------------------eeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHh
Confidence 001257999999999999999999999999999999999
Q ss_pred c---cCCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 306 C---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 306 t---pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+ ||....-. ...+.|.+ ...||. ...+....|+..+|.+||.+|.|..+++.|||+++...
T Consensus 195 ~G~PPF~a~si~-~Lv~~I~~d~v~~p~--~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~~ 259 (808)
T KOG0597|consen 195 VGQPPFYARSIT-QLVKSILKDPVKPPS--TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKIN 259 (808)
T ss_pred cCCCCchHHHHH-HHHHHHhcCCCCCcc--cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhhh
Confidence 9 55443333 33333433 333333 44566679999999999999999999999999987643
|
|
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=303.57 Aligned_cols=242 Identities=18% Similarity=0.198 Sum_probs=180.9
Q ss_pred CCcccccccccC------CC-CCCccccccccccCCCCccceeeeehhhhcccCC-CCCceecccceeecCCCCCcEEEE
Q 004998 28 SSRALNISGVSD------RN-PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHA 99 (720)
Q Consensus 28 ~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv 99 (720)
-.+.+|.+.|+. .. .+..+.+.+.-..........-..+|..+|.++. |||||.+++ +|++.. .+++|
T Consensus 39 l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~-~~e~~~---~~~lv 114 (382)
T KOG0032|consen 39 LGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKD-AFEDPD---SVYLV 114 (382)
T ss_pred ehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEE-EEEcCC---eEEEE
Confidence 345666666665 22 2223333322222222222233447888999999 999999999 777765 67999
Q ss_pred Eec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccC----CceEEeccCcccCCCCC
Q 004998 100 IEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF----NHVSFIESASCSDSGSD 174 (720)
Q Consensus 100 ~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~----~~vkliDfg~a~~~g~~ 174 (720)
||+ .||.|.+.|.+. . +++..+..+++||+.++.|||+.||+||||||+|||+... +.+|++|||++......
T Consensus 115 mEL~~GGeLfd~i~~~-~-~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~ 192 (382)
T KOG0032|consen 115 MELCEGGELFDRIVKK-H-YSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPG 192 (382)
T ss_pred EEecCCchHHHHHHHc-c-CCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCC
Confidence 999 999999999554 3 9999999999999999999999999999999999999733 47999888887433211
Q ss_pred CcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccch
Q 004998 175 SHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNV 254 (720)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~ 254 (720)
.
T Consensus 193 ~------------------------------------------------------------------------------- 193 (382)
T KOG0032|consen 193 E------------------------------------------------------------------------------- 193 (382)
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred hhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCC--CCcc
Q 004998 255 EQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQ 329 (720)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~ 329 (720)
.....+||+.|+|||++.+.+|+..+||||+||++|.|++ ||.......... .+..+. ++..
T Consensus 194 ------------~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-~i~~~~~~f~~~ 260 (382)
T KOG0032|consen 194 ------------RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-AILRGDFDFTSE 260 (382)
T ss_pred ------------eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-HHHcCCCCCCCC
Confidence 0012689999999999999999999999999999999999 666655443333 333332 3333
Q ss_pred ccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 330 LLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 330 ~~~-~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.+. .+....+|+..||..||..|+|+.++|+|||++..
T Consensus 261 ~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 261 PWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI 299 (382)
T ss_pred CccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence 333 34444599999999999999999999999999986
|
|
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-34 Score=306.01 Aligned_cols=211 Identities=18% Similarity=0.197 Sum_probs=173.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
-.+.|..+++++.|||||.+++.|.+++. .++|||+| .||+|.+.|. +.+..+++..+..||.||+.||.|||+.
T Consensus 49 ~A~~E~~lis~~~hP~iv~y~ds~~~~~~---~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~ 125 (426)
T KOG0589|consen 49 SAIQEMDLLSKLLHPNIVEYKDSFEEDGQ---LLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN 125 (426)
T ss_pred HHHHHHHHHHhccCCCeeeeccchhcCCc---eEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh
Confidence 34588899999999999999996666653 48999999 9999999993 3446689999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
.|+|||||+.||+++.++.|+|.|||+++..+.+. +|
T Consensus 126 ~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~---------------------------------~~---------- 162 (426)
T KOG0589|consen 126 RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED---------------------------------SL---------- 162 (426)
T ss_pred hhhcccchhhhhhccccCceeecchhhhhhcCCch---------------------------------hh----------
Confidence 99999999999999999999997777775543321 00
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
....+|||.||+||++.+.+|+.++|||||||+
T Consensus 163 -----------------------------------------------a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~ 195 (426)
T KOG0589|consen 163 -----------------------------------------------ASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCC 195 (426)
T ss_pred -----------------------------------------------hheecCCCcccCHHHhCCCCCCccCcchhhcch
Confidence 012689999999999999999999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|||++ +|...+...-..+ +......|...........++..||..+|..||++.++|.+|.+...
T Consensus 196 ~yEm~~lk~aF~a~~m~~Li~k-i~~~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 196 LYEMCTLKPAFKASNMSELILK-INRGLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLRY 264 (426)
T ss_pred HHHHHhcccccCccchHHHHHH-HhhccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence 999999 6777665544444 44444555444455566699999999999999999999999876654
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-34 Score=301.40 Aligned_cols=203 Identities=16% Similarity=0.161 Sum_probs=162.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ ++.+.. .+|++||| .+++|.+++.+.+ .+++..++.++.||+.||.|||++||
T Consensus 48 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i 122 (291)
T cd05612 48 VHNEKRVLKEVSHPFIIRLFW-TEHDQR---FLYMLMEYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLHSKEI 122 (291)
T ss_pred HHHHHHHHHhCCCCcHhhhHh-hhccCC---eEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346778999999999999999 444432 68999999 8999999995544 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++......
T Consensus 123 ~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~------------------------------------------------ 154 (291)
T cd05612 123 VYRDLKPENILLDKEGHIKLTDFGFAKKLRDR------------------------------------------------ 154 (291)
T ss_pred eecCCCHHHeEECCCCCEEEEecCcchhccCC------------------------------------------------
Confidence 99999999999999999999999887321000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....||+.|+|||++.+..++.++|||||||++|
T Consensus 155 ---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ 189 (291)
T cd05612 155 ---------------------------------------------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIY 189 (291)
T ss_pred ---------------------------------------------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHH
Confidence 00136899999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
||++ ||...... ..+..+..... .++. ..+...+||.+||..||.+||+ +.++++||||...
T Consensus 190 ~l~~g~~pf~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 190 EMLVGYPPFFDDNPF-GIYEKILAGKL--EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSV 260 (291)
T ss_pred HHHhCCCCCCCCCHH-HHHHHHHhCCc--CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence 9999 66655443 33333333221 1112 2345569999999999999995 9999999999865
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=315.11 Aligned_cols=220 Identities=19% Similarity=0.278 Sum_probs=176.9
Q ss_pred CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEE
Q 004998 75 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 153 (720)
Q Consensus 75 ~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NIL 153 (720)
+||.++++|. +|+... ++|+|||| .||++..+. ....+++..++.|+..|+.||.|||++|||+||||.+|||
T Consensus 427 ~HPFL~~L~~-~fQT~~---~l~fvmey~~Ggdm~~~~--~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiL 500 (694)
T KOG0694|consen 427 RHPFLVNLFS-CFQTKE---HLFFVMEYVAGGDLMHHI--HTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLL 500 (694)
T ss_pred cCCeEeeccc-ccccCC---eEEEEEEecCCCcEEEEE--ecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheE
Confidence 6999999999 777665 78999999 999965544 2234999999999999999999999999999999999999
Q ss_pred EccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccc
Q 004998 154 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 233 (720)
Q Consensus 154 l~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~ 233 (720)
|+.+|++||+|||+|+.--.. ++
T Consensus 501 LD~eGh~kiADFGlcKe~m~~---------------------------------g~------------------------ 523 (694)
T KOG0694|consen 501 LDTEGHVKIADFGLCKEGMGQ---------------------------------GD------------------------ 523 (694)
T ss_pred EcccCcEEecccccccccCCC---------------------------------CC------------------------
Confidence 999999999999998531000 00
Q ss_pred cccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCC
Q 004998 234 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST 310 (720)
Q Consensus 234 ~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~ 310 (720)
+..+.+|||.|||||++.+..|+.++|+|||||+|||||. ||.+
T Consensus 524 ---------------------------------~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~g 570 (694)
T KOG0694|consen 524 ---------------------------------RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPG 570 (694)
T ss_pred ---------------------------------ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCC
Confidence 1122699999999999999999999999999999999999 8988
Q ss_pred CchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC-ccchHHHHHHHHHhhh
Q 004998 311 GEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP-RDSMEEREAAIELREQ 383 (720)
Q Consensus 311 ~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~-~~~l~e~~~~~~~~e~ 383 (720)
.++....-..+....+.|.+ ++.+ .+++.++|..+|++|.. +++|.+||||+.. ++.++.+..++++.+.
T Consensus 571 ddEee~FdsI~~d~~~yP~~---ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~~r~i~PPf~P~ 647 (694)
T KOG0694|consen 571 DDEEEVFDSIVNDEVRYPRF---LSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLLNRRIKPPFVPT 647 (694)
T ss_pred CCHHHHHHHHhcCCCCCCCc---ccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHhhccCCCCCCcc
Confidence 77764433344333333333 2444 49999999999999973 6899999999987 6677777878888887
Q ss_pred hhHHHHHHHH
Q 004998 384 IDEEELLLEF 393 (720)
Q Consensus 384 ~~~~e~L~~f 393 (720)
+...+....|
T Consensus 648 i~~~~D~snF 657 (694)
T KOG0694|consen 648 IKGPEDVSNF 657 (694)
T ss_pred cCChhhhccc
Confidence 7765555544
|
|
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=305.44 Aligned_cols=203 Identities=16% Similarity=0.179 Sum_probs=163.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ .+.++. .+|++||| .|++|.+++.+.+ .+++..+..++.||+.||.|||++||
T Consensus 65 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~i 139 (329)
T PTZ00263 65 VAQEKSILMELSHPFIVNMMC-SFQDEN---RVYFLLEFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYLHSKDI 139 (329)
T ss_pred HHHHHHHHHhCCCCCCCcEEE-EEEcCC---EEEEEEcCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346788999999999999999 555443 67999999 8999999996544 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++......
T Consensus 140 vH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~------------------------------------------------ 171 (329)
T PTZ00263 140 IYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR------------------------------------------------ 171 (329)
T ss_pred eecCCCHHHEEECCCCCEEEeeccCceEcCCC------------------------------------------------
Confidence 99999999999999999999998877321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....||+.|+|||++.+..++.++|||||||++|
T Consensus 172 ---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 206 (329)
T PTZ00263 172 ---------------------------------------------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLY 206 (329)
T ss_pred ---------------------------------------------cceecCChhhcCHHHHcCCCCCCcceeechHHHHH
Confidence 00136899999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
||++ ||...... ..+..+....++ ++. ..+...+||.+||+.||.+||+ +.+++.||||...
T Consensus 207 elltg~~pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 207 EFIAGYPPFFDDTPF-RIYEKILAGRLK--FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred HHHcCCCCCCCCCHH-HHHHHHhcCCcC--CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence 9999 66554433 344444443322 112 2234559999999999999986 7999999999874
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=302.97 Aligned_cols=207 Identities=18% Similarity=0.257 Sum_probs=163.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ .+.... .+|+|||| .|++|.+++.+. ..+++..++.++.||+.||+|||++|
T Consensus 41 ~~~~e~~~l~~l~hp~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ 115 (323)
T cd05571 41 HTLTESRVLQNTRHPFLTALKY-SFQTHD---RLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALGYLHSCD 115 (323)
T ss_pred HHHHHHHHHHhCCCCCCCCEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3346778999999999999999 555443 67999999 899999999554 35899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++...... .
T Consensus 116 ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~---------------------------------~------------ 150 (323)
T cd05571 116 VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG---------------------------------A------------ 150 (323)
T ss_pred eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC---------------------------------C------------
Confidence 9999999999999999999999998873210000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+||+.|+|||++.+..++.++|||||||++
T Consensus 151 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il 185 (323)
T cd05571 151 ---------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 185 (323)
T ss_pred ---------------------------------------------cccceecCccccChhhhcCCCCCccccCcccchhh
Confidence 00114689999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... .....+..... .++. ..+...+||.+||+.||++|| ++.++++||||...
T Consensus 186 ~elltg~~Pf~~~~~~-~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~ 257 (323)
T cd05571 186 YEMMCGRLPFYNQDHE-KLFELILMEEI--RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI 257 (323)
T ss_pred hhhhcCCCCCCCCCHH-HHHHHHHcCCC--CCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 99999 66554433 23333332211 1222 234456999999999999999 89999999999885
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=300.89 Aligned_cols=207 Identities=17% Similarity=0.248 Sum_probs=163.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++..+..++.||+.||.|||++|
T Consensus 39 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ 113 (312)
T cd05585 39 HTLAERTVLAQVNCPFIVPLKF-SFQSPE---KLYLVLAFINGGELFHHLQREG-RFDLSRARFYTAELLCALENLHKFN 113 (312)
T ss_pred HHHHHHHHHHhCCCCcEeceee-EEecCC---eEEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446788999999999999998 555443 67999999 9999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||++....... +
T Consensus 114 i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---------------------------------~------------ 148 (312)
T cd05585 114 VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD---------------------------------D------------ 148 (312)
T ss_pred eEeCCCCHHHeEECCCCcEEEEECcccccCccCC---------------------------------C------------
Confidence 9999999999999999999999998874210000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 149 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil 183 (312)
T cd05585 149 ---------------------------------------------KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLL 183 (312)
T ss_pred ---------------------------------------------ccccccCCcccCCHHHHcCCCCCCccceechhHHH
Confidence 00114689999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC---ChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rp---ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... .....+... +..++... +...+|+.+||.+||.+|| ++.|+|.||||...
T Consensus 184 ~el~tg~~pf~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~ 253 (312)
T cd05585 184 YEMLTGLPPFYDENVN-EMYRKILQE--PLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL 253 (312)
T ss_pred HHHHhCCCCcCCCCHH-HHHHHHHcC--CCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence 99999 66554433 233333322 12222333 3445999999999999997 58999999999875
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=295.32 Aligned_cols=214 Identities=18% Similarity=0.219 Sum_probs=165.7
Q ss_pred ehhhhcccCCCCCceecccceeecCCC-CCcEEEEEecCCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAA-IDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~-~~~~~lv~E~~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+|..+|..++|||||+|...++..... .....+||||...+|.++++. .+..++..+++-|.+||++||.|||+.|
T Consensus 66 rEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~ 145 (364)
T KOG0658|consen 66 RELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG 145 (364)
T ss_pred HHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC
Confidence 888999999999999999855544443 346788999988999999963 3556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccC-CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 142 IVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 142 IvHrDLKP~NILl~~~-~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|+||||||.|+|++.+ |.+||||||.|+.....+
T Consensus 146 IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e--------------------------------------------- 180 (364)
T KOG0658|consen 146 ICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE--------------------------------------------- 180 (364)
T ss_pred cccCCCChheEEEcCCCCeEEeccCCcceeeccCC---------------------------------------------
Confidence 9999999999999955 999999999985431110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGv 299 (720)
.+..+..|..|+|||.+.|.. |+++.||||.||
T Consensus 181 ----------------------------------------------pniSYicSRyYRaPELifga~~Yt~~IDiWSaGC 214 (364)
T KOG0658|consen 181 ----------------------------------------------PNISYICSRYYRAPELIFGATEYTTSIDIWSAGC 214 (364)
T ss_pred ----------------------------------------------CceeEEEeccccCHHHHcCccccCceeEEhhhhH
Confidence 011256799999999999987 999999999999
Q ss_pred hhhhccc--c-CCCCchHHHHHHHhhc-C-----------------CCCc---c-----ccc-cCchHHHHHHHcCCCCC
Q 004998 300 LLFELFC--P-FSTGEEKTRTMSSLRH-R-----------------VLPP---Q-----LLL-KFPKEASFCLWLLHPEP 349 (720)
Q Consensus 300 ll~eLlt--p-f~~~~~~~~~~~~l~~-~-----------------~~p~---~-----~~~-~~p~~~~li~~~L~~dP 349 (720)
++.||+- | |++.....+....+.- + .+|. . +.. ..|+..+|+.++|.++|
T Consensus 215 V~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P 294 (364)
T KOG0658|consen 215 VMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSP 294 (364)
T ss_pred HHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccCh
Confidence 9999998 4 4443333222221110 0 0010 0 111 23455699999999999
Q ss_pred CCCCChHHHHcCcccCCCccc
Q 004998 350 SGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~~~~ 370 (720)
.+|.++.|+|.||||.+.+++
T Consensus 295 ~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 295 SKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred hhcCCHHHHhcchhhHHhhCc
Confidence 999999999999999988664
|
|
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-33 Score=293.06 Aligned_cols=204 Identities=17% Similarity=0.222 Sum_probs=152.4
Q ss_pred hcccCCCCCceecccceeec-CCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccC
Q 004998 70 ELTHGDHLRNQGGLSGVCEN-EAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 70 ~Ls~l~HpnIV~l~~~~~~~-~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.|..++||||+++++.+... ......++++|||.+++|.+++.. ....+++..++.++.||+.||.|||++||+||||
T Consensus 57 ~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dl 136 (290)
T cd07862 57 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDL 136 (290)
T ss_pred hhcccCCCCcceEEEEEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCC
Confidence 34456799999999943322 122346899999977899999944 3345899999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccccc
Q 004998 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+|||++.++.+||+|||++.......
T Consensus 137 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------------- 164 (290)
T cd07862 137 KPQNILVTSSGQIKLADFGLARIYSFQM---------------------------------------------------- 164 (290)
T ss_pred CHHHEEEcCCCCEEEccccceEeccCCc----------------------------------------------------
Confidence 9999999999999999988873321000
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc-
Q 004998 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 165 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g 205 (290)
T cd07862 165 ---------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRR 205 (290)
T ss_pred ---------------------------------------ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcC
Confidence 0011367999999999988889999999999999999999
Q ss_pred --cCCCCchHHHHHHHhhcCCCC--c----------------------cccccC-chHHHHHHHcCCCCCCCCCChHHHH
Q 004998 307 --PFSTGEEKTRTMSSLRHRVLP--P----------------------QLLLKF-PKEASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~~~p--~----------------------~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL 359 (720)
||............+.....| . .+.... +...+|+.+||++||++|||+.|+|
T Consensus 206 ~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l 285 (290)
T cd07862 206 KPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 285 (290)
T ss_pred CCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHh
Confidence 565544332222222111000 0 011122 2335999999999999999999999
Q ss_pred cCccc
Q 004998 360 QSEFL 364 (720)
Q Consensus 360 ~hp~~ 364 (720)
+||||
T Consensus 286 ~hp~f 290 (290)
T cd07862 286 SHPYF 290 (290)
T ss_pred cCCCC
Confidence 99997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-33 Score=300.60 Aligned_cols=218 Identities=15% Similarity=0.175 Sum_probs=161.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++||||+++++++.... .....+|++|||.+++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 45 ~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ 123 (338)
T cd07859 45 RILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIHTAN 123 (338)
T ss_pred HHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCCCCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999443222 2233589999998789999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 124 ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~-------------------------------------------- 159 (338)
T cd07859 124 VFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT-------------------------------------------- 159 (338)
T ss_pred eecCCCCHHHeEECCCCcEEEccCccccccccccCc--------------------------------------------
Confidence 999999999999999999999999887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC--CCCCccccchhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGV 299 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~s~~sDIwSLGv 299 (720)
.......+||+.|+|||++.+ ..++.++|||||||
T Consensus 160 -------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGv 196 (338)
T cd07859 160 -------------------------------------------AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGC 196 (338)
T ss_pred -------------------------------------------cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHH
Confidence 000011478999999999876 55899999999999
Q ss_pred hhhhccc---cCCCCchHHHH--H------------------------HHhhcCCCCc----cccccCchHHHHHHHcCC
Q 004998 300 LLFELFC---PFSTGEEKTRT--M------------------------SSLRHRVLPP----QLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~--~------------------------~~l~~~~~p~----~~~~~~p~~~~li~~~L~ 346 (720)
++|||++ ||......... + ..+... .+. .+....+...+|+.+||.
T Consensus 197 vl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~ 275 (338)
T cd07859 197 IFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKK-QPVPFSQKFPNADPLALRLLERLLA 275 (338)
T ss_pred HHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhccc-CCCchHHhcCCCChHHHHHHHHHcC
Confidence 9999999 55443221100 0 001100 111 111223445699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCcc
Q 004998 347 PEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.||++|||+.|+|+||||+....
T Consensus 276 ~~P~~Rpt~~e~l~hp~f~~~~~ 298 (338)
T cd07859 276 FDPKDRPTAEEALADPYFKGLAK 298 (338)
T ss_pred cCcccCCCHHHHhcCchhhhcCc
Confidence 99999999999999999987644
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-33 Score=295.97 Aligned_cols=213 Identities=15% Similarity=0.200 Sum_probs=161.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+++.++||||+++++ ++.+.. ..|+||||.+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 49 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i 124 (303)
T cd07869 49 TAIREASLLKGLKHANIVLLHD-IIHTKE---TLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYI 124 (303)
T ss_pred hHHHHHHHHhhCCCCCcCeEEE-EEecCC---eEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 4446888999999999999999 555443 679999997789999996665669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++....... .
T Consensus 125 vH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--------------------------------~-------------- 158 (303)
T cd07869 125 LHRDLKPQNLLISDTGELKLADFGLARAKSVPS--------------------------------H-------------- 158 (303)
T ss_pred ecCCCCHHHEEECCCCCEEECCCCcceeccCCC--------------------------------c--------------
Confidence 999999999999999999999998873211100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+.. ++.++|||||||++
T Consensus 159 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il 194 (303)
T cd07869 159 --------------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIF 194 (303)
T ss_pred --------------------------------------------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHH
Confidence 000135799999999987654 88999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--CC-----------------------CCcccc------ccCchHHHHHHHcCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRH--RV-----------------------LPPQLL------LKFPKEASFCLWLLHP 347 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~~-----------------------~p~~~~------~~~p~~~~li~~~L~~ 347 (720)
|||++ ||............+.. +. .+..+. ...+...+|+.+||++
T Consensus 195 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~ 274 (303)
T cd07869 195 VEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQC 274 (303)
T ss_pred HHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhcc
Confidence 99999 66654332222211110 00 000000 0113445999999999
Q ss_pred CCCCCCChHHHHcCcccCCCcc
Q 004998 348 EPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||.+|||+.|+|+||||+....
T Consensus 275 dp~~R~s~~~~l~h~~f~~~~~ 296 (303)
T cd07869 275 FPKNRLSAQAALSHEYFSDLPP 296 (303)
T ss_pred CchhccCHHHHhcCcccccCCh
Confidence 9999999999999999988643
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-33 Score=293.57 Aligned_cols=207 Identities=16% Similarity=0.199 Sum_probs=157.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++.+++||||+++++ ++.... .+++||||.+++|.+++...+..+++..++.++.||+.||+|||++||+
T Consensus 50 ~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~iv 125 (288)
T cd07871 50 AIREVSLLKNLKHANIVTLHD-IIHTER---CLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKIL 125 (288)
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEcCCC---eEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 346888999999999999999 554443 5799999966799999966555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++....... .
T Consensus 126 H~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~---------------------------------~-------------- 158 (288)
T cd07871 126 HRDLKPQNLLINEKGELKLADFGLARAKSVPT---------------------------------K-------------- 158 (288)
T ss_pred cCCCCHHHEEECCCCCEEECcCcceeeccCCC---------------------------------c--------------
Confidence 99999999999999999999998873321100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+. .++.++|||||||++|
T Consensus 159 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~ 195 (288)
T cd07871 159 -------------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILY 195 (288)
T ss_pred -------------------------------------------cccCceecccccChHHhcCCcccCcHHHHHHHHHHHH
Confidence 00013578999999998764 4899999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC--------------------CCCcc--------ccccCchHHHHHHHcCCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHR--------------------VLPPQ--------LLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~--------------------~~p~~--------~~~~~p~~~~li~~~L~~dP~~ 351 (720)
||++ ||............+... .+|.. .....++..+||.+||++||.+
T Consensus 196 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~ 275 (288)
T cd07871 196 EMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKS 275 (288)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCccc
Confidence 9999 565543332221111100 00000 0011234459999999999999
Q ss_pred CCChHHHHcCccc
Q 004998 352 RPKMGELLQSEFL 364 (720)
Q Consensus 352 Rpta~eiL~hp~~ 364 (720)
|||++|+|+||||
T Consensus 276 R~t~~~~l~hp~f 288 (288)
T cd07871 276 RISAEAALRHSYF 288 (288)
T ss_pred CCCHHHHhcCCCC
Confidence 9999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-33 Score=277.85 Aligned_cols=202 Identities=19% Similarity=0.283 Sum_probs=156.5
Q ss_pred CCCCCceecccceeecC-CCCCcEEEEEec-CCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCC
Q 004998 74 GDHLRNQGGLSGVCENE-AAIDPFVHAIEW-GDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 150 (720)
Q Consensus 74 l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~-~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~ 150 (720)
-.|||||.+++ +|+.. .....+.+|||+ .||.|...| .+....+++.++..|++||..||.|||+.+|.||||||+
T Consensus 112 s~h~~iV~Iid-VyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpE 190 (400)
T KOG0604|consen 112 SGHPHIVSIID-VYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPE 190 (400)
T ss_pred cCCCceEEeeh-hhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChh
Confidence 45999999999 55443 334457899999 999999999 344556999999999999999999999999999999999
Q ss_pred cEEEc---cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccccc
Q 004998 151 CFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 151 NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
|+|.. .+..+||+|||+|+....+ .++
T Consensus 191 NLLyt~t~~na~lKLtDfGFAK~t~~~---------------------------------~~L----------------- 220 (400)
T KOG0604|consen 191 NLLYTTTSPNAPLKLTDFGFAKETQEP---------------------------------GDL----------------- 220 (400)
T ss_pred heeeecCCCCcceEecccccccccCCC---------------------------------ccc-----------------
Confidence 99997 4456788777776432111 000
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhcccc
Q 004998 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCP 307 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltp 307 (720)
...+-||+|.|||++-...|+.+.|+|||||++|-|||+
T Consensus 221 -----------------------------------------~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCG 259 (400)
T KOG0604|consen 221 -----------------------------------------MTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259 (400)
T ss_pred -----------------------------------------cCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcC
Confidence 113569999999999888899999999999999999995
Q ss_pred CCCC---ch---HHHHHHHhhc--CCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 308 FSTG---EE---KTRTMSSLRH--RVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 308 f~~~---~~---~~~~~~~l~~--~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+++ .. .--+...|+. -.+|..-+...++.+ ++|+.+|..+|.+|.|+.+++.|||+++.
T Consensus 260 yPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 260 YPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY 328 (400)
T ss_pred CCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence 5543 11 0112233333 345555555555555 99999999999999999999999999987
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-33 Score=300.95 Aligned_cols=202 Identities=16% Similarity=0.144 Sum_probs=162.8
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++..+..++.||+.||.|||++||+
T Consensus 79 ~~E~~~l~~l~hp~Iv~~~~-~~~~~~---~~~lv~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~iv 153 (340)
T PTZ00426 79 FSERKILNYINHPFCVNLYG-SFKDES---YLYLVLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYLQSLNIV 153 (340)
T ss_pred HHHHHHHHhCCCCCCcceEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 36778999999999999999 555443 68999999 8999999995544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++......
T Consensus 154 HrDLkp~NILl~~~~~ikL~DFG~a~~~~~~------------------------------------------------- 184 (340)
T PTZ00426 154 YRDLKPENLLLDKDGFIKMTDFGFAKVVDTR------------------------------------------------- 184 (340)
T ss_pred ccCCCHHHEEECCCCCEEEecCCCCeecCCC-------------------------------------------------
Confidence 9999999999999999999998887321100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....||+.|+|||++.+..++.++|||||||++||
T Consensus 185 --------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 220 (340)
T PTZ00426 185 --------------------------------------------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYE 220 (340)
T ss_pred --------------------------------------------cceecCChhhcCHHHHhCCCCCccccccchhhHHHH
Confidence 001368999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+...... ++.. .+...+|+.+||+.||.+|+ ++.++++||||...
T Consensus 221 ll~G~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~ 290 (340)
T PTZ00426 221 ILVGCPPFYANEPL-LIYQKILEGIIY--FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI 290 (340)
T ss_pred HhcCCCCCCCCCHH-HHHHHHhcCCCC--CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 999 66654443 334444433221 1122 23445999999999999995 89999999999875
|
|
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=295.75 Aligned_cols=208 Identities=14% Similarity=0.186 Sum_probs=161.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.+++||||+++++ .+.+.. .++++||| .+++|.+++.. ....+++..++.++.||+.||.|||++|
T Consensus 47 ~~~E~~il~~l~~~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 122 (285)
T cd05631 47 ALNEKRILEKVNSRFVVSLAY-AYETKD---ALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRER 122 (285)
T ss_pred HHHHHHHHHhcCCCcEEEEEE-EEccCC---eEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 346788999999999999999 554443 57999999 89999988843 3345899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||++.......
T Consensus 123 iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------- 156 (285)
T cd05631 123 IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE---------------------------------------------- 156 (285)
T ss_pred EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC----------------------------------------------
Confidence 9999999999999999999999998873210000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 157 ---------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil 191 (285)
T cd05631 157 ---------------------------------------------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLI 191 (285)
T ss_pred ---------------------------------------------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHH
Confidence 00013689999999999998899999999999999
Q ss_pred hhccc---cCCCCchH---HHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCCc
Q 004998 302 FELFC---PFSTGEEK---TRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~---~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~~ 368 (720)
|||++ ||...... ......+... +..+.... +...+|+.+||..||.+||+ ++++++||||....
T Consensus 192 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~ 268 (285)
T cd05631 192 YEMIQGQSPFRKRKERVKREEVDRRVKED--QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN 268 (285)
T ss_pred HHHHhCCCCCCCCCcchhHHHHHHHhhcc--cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence 99999 66554321 1112222111 11222223 34559999999999999997 89999999999873
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-33 Score=299.29 Aligned_cols=210 Identities=18% Similarity=0.236 Sum_probs=166.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+.||+.++||+||+||+.+|... .++|+.|| +||-....+-.-++.|++.++..+++|+++||.|||+++|||
T Consensus 78 VEIeILa~CdHP~ivkLl~ayy~en----kLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIH 153 (1187)
T KOG0579|consen 78 VEIEILAECDHPVIVKLLSAYYFEN----KLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIH 153 (1187)
T ss_pred hhhhhhhcCCChHHHHHHHHHhccC----ceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhh
Confidence 6777999999999999999777655 47999999 788888877777788999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||..|||++-+|.++|+|||++...-..
T Consensus 154 RDLKAGNiL~TldGdirLADFGVSAKn~~t-------------------------------------------------- 183 (1187)
T KOG0579|consen 154 RDLKAGNILLTLDGDIRLADFGVSAKNKST-------------------------------------------------- 183 (1187)
T ss_pred hhccccceEEEecCcEeeecccccccchhH--------------------------------------------------
Confidence 999999999999999999999886211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-----CCCCCccccchhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSLGv 299 (720)
-.+...++|||+|||||+.. ..+|++++||||||+
T Consensus 184 ----------------------------------------~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGI 223 (1187)
T KOG0579|consen 184 ----------------------------------------RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGI 223 (1187)
T ss_pred ----------------------------------------HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhh
Confidence 00112368999999999975 456999999999999
Q ss_pred hhhhccccCCCC--chHHHHHHHhhcCCCCccc-cccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 300 LLFELFCPFSTG--EEKTRTMSSLRHRVLPPQL-LLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLltpf~~~--~~~~~~~~~l~~~~~p~~~-~~~~p~~-~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|.||.-.-++. -.....+..+.+..+|.-+ +..|... .||+.+||.+||..||++.+||+||||.....
T Consensus 224 TLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~S 297 (1187)
T KOG0579|consen 224 TLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPS 297 (1187)
T ss_pred HHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCc
Confidence 999999832222 2223444445444433322 3355544 49999999999999999999999999997644
|
|
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=273.45 Aligned_cols=243 Identities=16% Similarity=0.225 Sum_probs=184.3
Q ss_pred ccccCCcccccccccC------CCCCCccccccccccCC---CCccceeeeehhhhcccCCCCCceecccceeecCCCCC
Q 004998 24 QDSDSSRALNISGVSD------RNPRLLRGERFGVRGDD---SNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAID 94 (720)
Q Consensus 24 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~ 94 (720)
+.++.+|.||.+-|+. +...+..+-++.+...- .-...+| ||+.|-++|+||||+++|+ +|.+..
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlr--REiEIqs~L~hpnilrlY~-~fhd~~--- 95 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLR--REIEIQSHLRHPNILRLYG-YFHDSK--- 95 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhh--heeEeecccCCccHHhhhh-heeccc---
Confidence 4557788888888875 22222222222222110 0112223 4555889999999999999 666665
Q ss_pred cEEEEEec-CCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCC
Q 004998 95 PFVHAIEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 172 (720)
Q Consensus 95 ~~~lv~E~-~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g 172 (720)
.+|+++|| .+|+|...|. .....+++..+..|++|++.||.|+|..+||||||||+|+|++..|.+|++|||-+....
T Consensus 96 riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 96 RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 175 (281)
T ss_pred eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence 57999999 9999999994 345569999999999999999999999999999999999999999999998887652110
Q ss_pred CCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccccccccc
Q 004998 173 SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 252 (720)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~ 252 (720)
.
T Consensus 176 ~------------------------------------------------------------------------------- 176 (281)
T KOG0580|consen 176 S------------------------------------------------------------------------------- 176 (281)
T ss_pred C-------------------------------------------------------------------------------
Confidence 0
Q ss_pred chhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCcc
Q 004998 253 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ 329 (720)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~ 329 (720)
.+....+||..|.+||...+..++..+|+|++|++.||++. ||.... ...+++.|++-.+.
T Consensus 177 -------------~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k~~~~-- 240 (281)
T KOG0580|consen 177 -------------NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRKVDLK-- 240 (281)
T ss_pred -------------CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHHcccc--
Confidence 01123689999999999999999999999999999999999 676655 45667777653221
Q ss_pred ccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 330 LLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 330 ~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++...+. .+|||.+||..+|.+|.+..|++.|||+...
T Consensus 241 ~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 241 FPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN 279 (281)
T ss_pred CCcccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence 1133344 4599999999999999999999999998753
|
|
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-33 Score=294.92 Aligned_cols=243 Identities=16% Similarity=0.217 Sum_probs=183.0
Q ss_pred eecCCCcccccccccCCcccccccccCCCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCC
Q 004998 13 IIMEGSSDSAWQDSDSSRALNISGVSDRNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAA 92 (720)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~ 92 (720)
|.+|..++=-|..++.-+++..+.+. .+.++++++ .--+|.++..|.+|+||||+.+.| +|....
T Consensus 121 iPFe~IsELeWlGSGaQGAVF~Grl~---netVAVKKV----------~elkETdIKHLRkLkH~NII~FkG-VCtqsP- 185 (904)
T KOG4721|consen 121 IPFEEISELEWLGSGAQGAVFLGRLH---NETVAVKKV----------RELKETDIKHLRKLKHPNIITFKG-VCTQSP- 185 (904)
T ss_pred CCHHHhhhhhhhccCcccceeeeecc---CceehhHHH----------hhhhhhhHHHHHhccCcceeeEee-eecCCc-
Confidence 45555556666665555554443332 223333321 124568888999999999999999 554443
Q ss_pred CCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCC
Q 004998 93 IDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 93 ~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~ 171 (720)
-+||+||| ..|.|.+.|+. +++++......|..+|+.|+.|||.+.|||||||.-||||+.+..|||+|||.++..
T Consensus 186 --cyCIiMEfCa~GqL~~VLka-~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~ 262 (904)
T KOG4721|consen 186 --CYCIIMEFCAQGQLYEVLKA-GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKEL 262 (904)
T ss_pred --eeEEeeeccccccHHHHHhc-cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhh
Confidence 58999999 89999999954 456899999999999999999999999999999999999999999999999987432
Q ss_pred CCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccc
Q 004998 172 GSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNR 251 (720)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g 251 (720)
. |.
T Consensus 263 ~------------------------------------~~----------------------------------------- 265 (904)
T KOG4721|consen 263 S------------------------------------DK----------------------------------------- 265 (904)
T ss_pred h------------------------------------hh-----------------------------------------
Confidence 1 00
Q ss_pred cchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCc
Q 004998 252 VNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 328 (720)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~ 328 (720)
-+...+.||..|||||++...+++.++|||||||+|||||| ||...+.. .++--+....+.-
T Consensus 266 --------------STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss-AIIwGVGsNsL~L 330 (904)
T KOG4721|consen 266 --------------STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS-AIIWGVGSNSLHL 330 (904)
T ss_pred --------------hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh-eeEEeccCCcccc
Confidence 00122689999999999999999999999999999999999 77664433 1222223344444
Q ss_pred cccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 329 QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 329 ~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
..+..+|+.. -|++.||.-.|..||++.+||.|==|.
T Consensus 331 pvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 331 PVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred cCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 4556777766 678889999999999999999985333
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-33 Score=299.11 Aligned_cols=204 Identities=17% Similarity=0.238 Sum_probs=162.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++.+++||||+++++ .+.... .+|+|||| .|++|.+++...+ .+++..++.++.||+.||.|||++||+
T Consensus 49 ~~e~~~l~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~iv 123 (333)
T cd05600 49 LTERDILTTTKSEWLVKLLY-AFQDDE---YLYLAMEYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDALHELGYI 123 (333)
T ss_pred HHHHHHHHhCCCCCCccEEE-EEEcCC---EEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36777899999999999999 555443 68999999 8999999995543 489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++......
T Consensus 124 H~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~------------------------------------------------- 154 (333)
T cd05600 124 HRDLKPENFLIDASGHIKLTDFGLSKGIVTY------------------------------------------------- 154 (333)
T ss_pred ccCCCHHHEEECCCCCEEEEeCcCCcccccc-------------------------------------------------
Confidence 9999999999999999999999887321000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
....+||+.|+|||++.+..++.++|||||||++||
T Consensus 155 --------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~e 190 (333)
T cd05600 155 --------------------------------------------ANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYE 190 (333)
T ss_pred --------------------------------------------cCCcccCccccChhHhcCCCCCCccceecchHHHhh
Confidence 011468999999999999899999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcC---CCCcccc----ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHR---VLPPQLL----LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~---~~p~~~~----~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+... ...+... ...+...+|+.+||..+|.+||++.++++||||...
T Consensus 191 ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~ 263 (333)
T cd05600 191 FLCGFPPFSGSTPN-ETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV 263 (333)
T ss_pred hhhCCCCCCCCCHH-HHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence 999 66554332 222222221 1111111 223455699999999999999999999999999975
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=289.72 Aligned_cols=206 Identities=18% Similarity=0.197 Sum_probs=153.6
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.... .+|+|||| .++.| +.+......+++..++.++.||+.||.|||+.||+
T Consensus 48 ~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~l-~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~ 122 (287)
T cd07848 48 LRELKMLRTLKQENIVELKE-AFRRRG---KLYLVFEYVEKNML-ELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIV 122 (287)
T ss_pred HHHHHHHHhCCCccccchhh-hEecCC---EEEEEEecCCCCHH-HHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 36788999999999999999 444432 68999999 55544 44534344599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.+||+|||.+........ .
T Consensus 123 H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-------------------------------~--------------- 156 (287)
T cd07848 123 HRDIKPENLLISHNDVLKLCDFGFARNLSEGSN-------------------------------A--------------- 156 (287)
T ss_pred cCCCCHHHEEEcCCCcEEEeeccCccccccccc-------------------------------c---------------
Confidence 999999999999999999999988743211000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 157 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~e 193 (287)
T cd07848 157 -------------------------------------------NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGE 193 (287)
T ss_pred -------------------------------------------cccccccccccCCcHHHcCCCCCCchhHHhHHHHHHH
Confidence 0011367999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhh-cCCCC-------------------cc---------ccc-cCchHHHHHHHcCCCCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLR-HRVLP-------------------PQ---------LLL-KFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~-~~~~p-------------------~~---------~~~-~~p~~~~li~~~L~~dP~ 350 (720)
|++ ||.............. .+.+| .. ... ..+...+||.+||++||+
T Consensus 194 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~ 273 (287)
T cd07848 194 LSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPT 273 (287)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcc
Confidence 999 6655433222111100 00000 00 000 122345999999999999
Q ss_pred CCCChHHHHcCccc
Q 004998 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+|||++|+|+||||
T Consensus 274 ~R~s~~~~l~hp~f 287 (287)
T cd07848 274 DRYLTEQCLNHPAF 287 (287)
T ss_pred cCCCHHHHhcCCCC
Confidence 99999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-32 Score=302.70 Aligned_cols=257 Identities=15% Similarity=0.225 Sum_probs=166.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ .+.+.. .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++|
T Consensus 47 ~~~~E~~il~~l~h~~iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH~~g 121 (381)
T cd05626 47 HVKAERDILAEADNEWVVKLYY-SFQDKD---NLYFVMDYIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVHKMG 121 (381)
T ss_pred HHHHHHHHHHhcCCCCeeeeEE-EEecCC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446777999999999999999 555443 68999999 8999999995544 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.+++++|+|||++..+............. ..+. ....+... ..+..
T Consensus 122 ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~--------~~~~~---------- 181 (381)
T cd05626 122 FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGS-HIRQ-DSMEPSDL--------WDDVS---------- 181 (381)
T ss_pred eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccc-cccc-cccCcccc--------ccccc----------
Confidence 9999999999999999999999999986543221100000000 0000 00000000 00000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.+ ..+. ...+.. ...............+||+.|+|||++.+..++.++|||||||++
T Consensus 182 --~~-----~~~~-----------~~~~~~-----~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il 238 (381)
T cd05626 182 --NC-----RCGD-----------RLKTLE-----QRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVIL 238 (381)
T ss_pred --cc-----cccc-----------ccchhh-----ccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHH
Confidence 00 0000 000000 000000000001235799999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--CCCCccccccCchHHHHHHHcC--CCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLL--HPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p~~~~li~~~L--~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++ ||............+.. ....+......+...+||.+|| ..+|..||++.++++||||...
T Consensus 239 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~ 311 (381)
T cd05626 239 FEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEV 311 (381)
T ss_pred HHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCC
Confidence 99999 67655443333322221 1111222233456679999855 5556669999999999999875
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=297.29 Aligned_cols=207 Identities=17% Similarity=0.245 Sum_probs=162.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++||||+++++ ++.... .+|+|||| .+++|.+++... ..+++.+++.++.||+.||+|||++|
T Consensus 41 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~Ey~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ 115 (328)
T cd05593 41 HTLTESRVLKNTRHPFLTSLKY-SFQTKD---RLCFVMEYVNGGELFFHLSRE-RVFSEDRTRFYGAEIVSALDYLHSGK 115 (328)
T ss_pred HHHHHHHHHHhCCCCCCcceEE-EEEcCC---EEEEEEeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446778999999999999998 555443 67999999 899999998544 35999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.......
T Consensus 116 ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~---------------------------------------------- 149 (328)
T cd05593 116 IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA---------------------------------------------- 149 (328)
T ss_pred eEecccCHHHeEECCCCcEEEecCcCCccCCCcc----------------------------------------------
Confidence 9999999999999999999999998873210000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+||+.|+|||++.+..++.++|||||||++
T Consensus 150 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil 185 (328)
T cd05593 150 --------------------------------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 185 (328)
T ss_pred --------------------------------------------cccccccCCcCccChhhhcCCCCCccCCccccchHH
Confidence 000114689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... .....+..... .++.. .+...+|+.+||.+||.+|| ++.++++||||...
T Consensus 186 ~elltG~~Pf~~~~~~-~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 257 (328)
T cd05593 186 YEMMCGRLPFYNQDHE-KLFELILMEDI--KFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV 257 (328)
T ss_pred HHHhhCCCCCCCCCHH-HHHHHhccCCc--cCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 99999 66554332 22223222111 12222 34556999999999999997 89999999999875
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=9.5e-33 Score=300.09 Aligned_cols=235 Identities=17% Similarity=0.231 Sum_probs=167.0
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++..++||||+++++ .+.++. .+|+|||| .|++|.+++.+. ..+++..++.++.||+.||.|||++||+
T Consensus 49 ~~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~gii 123 (350)
T cd05573 49 RAERDILADADSPWIVKLYY-SFQDEE---HLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFI 123 (350)
T ss_pred HHHHHHHHhcCCCCccchhh-heecCC---eEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 35667899999999999999 454443 68999999 899999999655 4599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++............... .+.... .
T Consensus 124 H~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~-------------------------~~~~~~--------~ 170 (350)
T cd05573 124 HRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLND-------------------------SHNLLF--------R 170 (350)
T ss_pred ccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccc-------------------------cccccc--------c
Confidence 9999999999999999999999998654332110000000 000000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.. ...................||+.|+|||++.+..++.++|||||||++||
T Consensus 171 ~~----------------------------~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e 222 (350)
T cd05573 171 DN----------------------------VLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYE 222 (350)
T ss_pred cc----------------------------ccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhh
Confidence 00 00000000000111123579999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc---CCCCccccccCchHHHHHHHcCCCCCCCCCC-hHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~---~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt-a~eiL~hp~~~~~ 367 (720)
|++ ||....... ....+.. ....|......+...+||.+||. ||.+||+ +.++++||||...
T Consensus 223 ll~g~~Pf~~~~~~~-~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~ 291 (350)
T cd05573 223 MLYGFPPFYSDTLQE-TYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI 291 (350)
T ss_pred hccCCCCCCCCCHHH-HHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence 999 666555432 2233322 11112222234455699999997 9999999 9999999999875
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.2e-32 Score=293.04 Aligned_cols=211 Identities=16% Similarity=0.166 Sum_probs=152.0
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC--------CCCCCHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP--------KRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~--------~~~l~~~~~~~i~~QIl~aL~y 136 (720)
.+|..+|++++||||+++++ ++.... ...+|++|||.+++|.+++... ...+++..++.++.||+.||+|
T Consensus 46 ~~E~~~l~~l~h~niv~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~ 123 (317)
T cd07868 46 CREIALLRELKHPNVISLQK-VFLSHA-DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHY 123 (317)
T ss_pred HHHHHHHHhcCCCCCcceee-eEecCC-CcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHH
Confidence 46888999999999999999 443322 2368999999888999988421 2248999999999999999999
Q ss_pred HHHcCceeccCCCCcEEE----ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccc
Q 004998 137 AHSQGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
||++||+||||||+|||+ +..+.+||+|||++...+..... .
T Consensus 124 LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~--------------------------------~-- 169 (317)
T cd07868 124 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP--------------------------------L-- 169 (317)
T ss_pred HHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCcc--------------------------------c--
Confidence 999999999999999999 45678999999887433211000 0
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCcc
Q 004998 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCA 291 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~ 291 (720)
.......||+.|+|||++.+. .++.+
T Consensus 170 -----------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~ 196 (317)
T cd07868 170 -----------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTKA 196 (317)
T ss_pred -----------------------------------------------------cccCCccccccccCCHHHcCCCCcCch
Confidence 000114689999999999875 48999
Q ss_pred ccchhhhhhhhhccc---cCCCCchH--------HHHHHHhhc----------------------------CCCCc-c--
Q 004998 292 SDIYRLGVLLFELFC---PFSTGEEK--------TRTMSSLRH----------------------------RVLPP-Q-- 329 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~--------~~~~~~l~~----------------------------~~~p~-~-- 329 (720)
+|||||||++|||++ ||...... ...+..+.. ..... .
T Consensus 197 ~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (317)
T cd07868 197 IDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLI 276 (317)
T ss_pred hhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCccccc
Confidence 999999999999999 55422110 000000000 00000 0
Q ss_pred ------ccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 330 ------LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 330 ------~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
.....+...+||.+||++||.+|||++|+|+||||
T Consensus 277 ~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 277 KYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred chHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 00011234589999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.8e-32 Score=308.05 Aligned_cols=219 Identities=19% Similarity=0.247 Sum_probs=168.6
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCC----CCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHH
Q 004998 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~----~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~a 133 (720)
.+..+|..+|..++|+||+++++.+..... ....+++|||| .+++|.++|.. ....+++..+..++.||+.|
T Consensus 76 ~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~a 155 (496)
T PTZ00283 76 NRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLA 155 (496)
T ss_pred HHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHH
Confidence 345578888999999999999884432221 12247899999 99999999943 23468999999999999999
Q ss_pred HHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccc
Q 004998 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|.|||++||+||||||+|||++.++.+||+|||+++........ +
T Consensus 156 L~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~-------------------------------~---- 200 (496)
T PTZ00283 156 VHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSD-------------------------------D---- 200 (496)
T ss_pred HHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccc-------------------------------c----
Confidence 99999999999999999999999999999999987443211000 0
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcccc
Q 004998 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.....+||+.|+|||++.+..++.++|
T Consensus 201 -----------------------------------------------------~~~~~~Gt~~Y~aPE~~~~~~~s~k~D 227 (496)
T PTZ00283 201 -----------------------------------------------------VGRTFCGTPYYVAPEIWRRKPYSKKAD 227 (496)
T ss_pred -----------------------------------------------------ccccccCCcceeCHHHhCCCCCCcHHH
Confidence 001146899999999999988999999
Q ss_pred chhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||||||++|||++ ||...... ..+..+..+..++......+...+|+.+||+.||.+||++.++++|||++....
T Consensus 228 VwSlGvilyeLltG~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~~~ 305 (496)
T PTZ00283 228 MFSLGVLLYELLTLKRPFDGENME-EVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLFIS 305 (496)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHhhh
Confidence 9999999999999 77655443 333333333333332333455669999999999999999999999999886533
|
|
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.5e-32 Score=295.86 Aligned_cols=204 Identities=19% Similarity=0.273 Sum_probs=161.8
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ ++.... .+|+|||| .+++|.+++.+.. .+++..++.++.||+.||.|||++||+
T Consensus 43 ~~E~~~l~~l~hp~i~~~~~-~~~~~~---~~~lv~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~iv 117 (323)
T cd05595 43 VTESRVLQNTRHPFLTALKY-AFQTHD---RLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDVV 117 (323)
T ss_pred HHHHHHHHhCCCCCCcceee-EEecCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 36778999999999999999 554443 68999999 8999999985443 589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++........
T Consensus 118 H~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~----------------------------------------------- 150 (323)
T cd05595 118 YRDIKLENLMLDKDGHIKITDFGLCKEGISDGA----------------------------------------------- 150 (323)
T ss_pred ecCCCHHHEEEcCCCCEEecccHHhccccCCCC-----------------------------------------------
Confidence 999999999999999999999988732100000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 151 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 187 (323)
T cd05595 151 -------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE 187 (323)
T ss_pred -------------------------------------------ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHH
Confidence 0001368999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcC--CCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~--~~p~~~~~~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+... .+|. ...+...+||.+||.+||.+|| ++.++++||||...
T Consensus 188 ll~g~~Pf~~~~~~-~~~~~~~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~ 257 (323)
T cd05595 188 MMCGRLPFYNQDHE-RLFELILMEEIRFPR---TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 257 (323)
T ss_pred HHhCCCCCCCCCHH-HHHHHHhcCCCCCCC---CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence 999 66654433 222222221 1222 2234556999999999999998 89999999999985
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-32 Score=301.07 Aligned_cols=240 Identities=18% Similarity=0.262 Sum_probs=163.8
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ .+.+.. .+|+|||| .|++|.+++.+.+ .+++.+++.++.||+.||+|||++||+
T Consensus 49 ~~E~~il~~~~~~~iv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~giv 123 (363)
T cd05628 49 RAERDILVEADSLWVVKMFY-SFQDKL---NLYLIMEFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSIHQLGFI 123 (363)
T ss_pred HHHHHHHHhCCCCCcceEEE-EEecCC---eEEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 35677899999999999999 555543 67999999 8999999995543 599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++............... ....+ .++.+.......
T Consensus 124 HrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~-------~~~~~------------~~~~~~~~~~~~---- 180 (363)
T cd05628 124 HRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNL-------NHSLP------------SDFTFQNMNSKR---- 180 (363)
T ss_pred ecCCCHHHeEECCCCCEEEeeccCcccccccccccccccc-------ccccc------------cccccccccccc----
Confidence 9999999999999999999999998654221100000000 00000 111000000000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.. +.............+||+.|+|||++.+..++.++|||||||++||
T Consensus 181 -----------------------~~---------~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~e 228 (363)
T cd05628 181 -----------------------KA---------ETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYE 228 (363)
T ss_pred -----------------------cc---------chhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHH
Confidence 00 0000000000112579999999999999889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcC----CCCccccccCchHHHHHHHcCCCCCC---CCCChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPS---GRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~----~~p~~~~~~~p~~~~li~~~L~~dP~---~Rpta~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+... .+|+. ....+...+|+.+|+. +|. .||+++||++||||...
T Consensus 229 ll~G~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~-~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~ 299 (363)
T cd05628 229 MLIGYPPFCSETPQ-ETYKKVMNWKETLIFPPE-VPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV 299 (363)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHcCcCcccCCCc-CCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence 999 66654433 333333321 12222 2234556699998765 444 45899999999999986
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.2e-32 Score=297.48 Aligned_cols=212 Identities=19% Similarity=0.230 Sum_probs=158.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++..++||||+++++ ++.... ....+|++|||.+++|.+++.. .+++..+..++.||+.||.|||+
T Consensus 66 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~ 141 (359)
T cd07876 66 RAYRELVLLKCVNHKNIISLLN-VFTPQKSLEEFQDVYLVMELMDANLCQVIHM---ELDHERMSYLLYQMLCGIKHLHS 141 (359)
T ss_pred HHHHHHHHHHhCCCCCEeeeee-eeccCCCccccceeEEEEeCCCcCHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHh
Confidence 3447788999999999999999 443332 2235799999977788887732 38899999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||++...... +
T Consensus 142 ~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~-----------------------------------~--------- 177 (359)
T cd07876 142 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN-----------------------------------F--------- 177 (359)
T ss_pred CCcccCCCCHHHEEECCCCCEEEecCCCccccccC-----------------------------------c---------
Confidence 99999999999999999999999999887321100 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 178 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~ 210 (359)
T cd07876 178 -----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 210 (359)
T ss_pred -----------------------------------------------cCCCCcccCCCCCchhccCCCCCcchhhHHHHH
Confidence 001136799999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh----------------------c-CCCCcc----cc-------------ccCch
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLR----------------------H-RVLPPQ----LL-------------LKFPK 336 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~----------------------~-~~~p~~----~~-------------~~~p~ 336 (720)
++|+|++ ||...+........+. . ...+.. .. ...+.
T Consensus 211 il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (359)
T cd07876 211 IMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQ 290 (359)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchh
Confidence 9999999 6654432211110000 0 000000 00 01133
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 337 ~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
..+||.+||.+||++|||+.|+|+||||.....
T Consensus 291 ~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~ 323 (359)
T cd07876 291 ARDLLSKMLVIDPDKRISVDEALRHPYITVWYD 323 (359)
T ss_pred HHHHHHHHhccCcccCCCHHHHhcCchhhhhcC
Confidence 459999999999999999999999999986433
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.6e-32 Score=293.72 Aligned_cols=229 Identities=21% Similarity=0.253 Sum_probs=168.3
Q ss_pred CCccccccccccCCCC-ccceeeeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCH
Q 004998 43 RLLRGERFGVRGDDSN-DFELRKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDV 120 (720)
Q Consensus 43 ~~~~~~~~~~~~~~~~-~~~~r~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~ 120 (720)
+..+.+++++.+.+.+ -..|+ .|+..|.+|. |.+||+||+ |+-. ...+|+||||+..+|..+|++....++.
T Consensus 386 ~iyalkkv~~~~~D~qtl~gy~--nEI~lL~KLkg~~~IIqL~D--YEv~--d~~lYmvmE~Gd~DL~kiL~k~~~~~~~ 459 (677)
T KOG0596|consen 386 QIYALKKVVLLEADNQTLDGYR--NEIALLNKLKGHDKIIQLYD--YEVT--DGYLYMVMECGDIDLNKILKKKKSIDPD 459 (677)
T ss_pred cchhhhHHHHhhcCHHHHHHHH--HHHHHHHHhcCCceEEEEee--eecc--CceEEEEeecccccHHHHHHhccCCCch
Confidence 3344455544433221 23334 4555777754 999999999 3333 2368999999999999999887776776
Q ss_pred HHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHh
Q 004998 121 YECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQ 200 (720)
Q Consensus 121 ~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (720)
..++.|..|++.+|.++|.+||||.||||.|||+- .|.+||||||+|.....+..
T Consensus 460 ~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTT------------------------ 514 (677)
T KOG0596|consen 460 WFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTT------------------------ 514 (677)
T ss_pred HHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCcccc------------------------
Confidence 79999999999999999999999999999999995 68999999998854332210
Q ss_pred hhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCC
Q 004998 201 RRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASP 280 (720)
Q Consensus 201 ~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 280 (720)
.+ -....+||+.||+|
T Consensus 515 ---------------------------------------------sI-------------------~kdsQvGT~NYMsP 530 (677)
T KOG0596|consen 515 ---------------------------------------------SI-------------------VKDSQVGTVNYMSP 530 (677)
T ss_pred ---------------------------------------------ce-------------------eeccccCcccccCH
Confidence 00 01125899999999
Q ss_pred ccccCCC-----------CCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcC---CCCccccccCchHHHHHHH
Q 004998 281 EELAGAP-----------VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLW 343 (720)
Q Consensus 281 E~l~~~~-----------~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~---~~p~~~~~~~p~~~~li~~ 343 (720)
|.+.... .+.+|||||||||||+|+. ||........-+..|... +.-|.....++ ..++++.
T Consensus 531 EAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~-li~~mK~ 609 (677)
T KOG0596|consen 531 EALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDE-LIDVMKC 609 (677)
T ss_pred HHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchH-HHHHHHH
Confidence 9985322 5689999999999999998 666554444444444432 12222333332 5699999
Q ss_pred cCCCCCCCCCChHHHHcCcccCCC
Q 004998 344 LLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 344 ~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||.+||.+||++.++|+|||++..
T Consensus 610 CL~rdPkkR~si~eLLqhpFl~~~ 633 (677)
T KOG0596|consen 610 CLARDPKKRWSIPELLQHPFLQIQ 633 (677)
T ss_pred HHhcCcccCCCcHHHhcCcccccc
Confidence 999999999999999999999985
|
|
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.4e-32 Score=294.41 Aligned_cols=208 Identities=18% Similarity=0.250 Sum_probs=162.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-c
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-Q 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~ 140 (720)
+...|..++..++||||+++++ ++.... .+|+|||| .+++|.+++... ..+++..++.++.||+.||.|||+ .
T Consensus 41 ~~~~e~~~l~~~~hp~i~~~~~-~~~~~~---~~~lv~E~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~ 115 (325)
T cd05594 41 HTLTENRVLQNSRHPFLTALKY-SFQTHD---RLCFVMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEK 115 (325)
T ss_pred HHHHHHHHHHhCCCCCCCceEE-EEEcCC---EEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 3446777899999999999998 554443 68999999 899999988544 359999999999999999999998 7
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++....... .
T Consensus 116 ~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~---------------------------------~----------- 151 (325)
T cd05594 116 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---------------------------------A----------- 151 (325)
T ss_pred CEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC---------------------------------c-----------
Confidence 99999999999999999999999998873211000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 152 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 185 (325)
T cd05594 152 ----------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 185 (325)
T ss_pred ----------------------------------------------ccccccCCcccCCHHHHccCCCCCccccccccce
Confidence 0001368999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... .....+...... ......+...+|+.+||.+||.+|+ ++.++++||||...
T Consensus 186 l~el~tG~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~ 258 (325)
T cd05594 186 MYEMMCGRLPFYNQDHE-KLFELILMEEIR-FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI 258 (325)
T ss_pred eeeeccCCCCCCCCCHH-HHHHHHhcCCCC-CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence 999999 66554332 233333222111 1112335556999999999999996 89999999999885
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.2e-32 Score=303.49 Aligned_cols=255 Identities=15% Similarity=0.198 Sum_probs=167.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|++++|||||++++ .+.++. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||+|||++||
T Consensus 48 ~~~E~~il~~~~h~~iv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~lH~~~i 122 (382)
T cd05625 48 VKAERDILAEADNEWVVRLYY-SFQDKD---NLYFVMDYIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESVHKMGF 122 (382)
T ss_pred HHHHHHHHHhCCCCcCCeEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 336777999999999999999 555443 68999999 8999999995543 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++..+............ +. .+ ....+|.... . ..
T Consensus 123 vHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~-------------~~--~~--~~~~~~~~~~--~---~~ 180 (382)
T cd05625 123 IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSG-------------DH--VR--QDSMDFSNEW--G---DP 180 (382)
T ss_pred ecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccc-------------cc--cc--cccccccccc--c---cc
Confidence 99999999999999999999999998654221100000000 00 00 0000110000 0 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
..+. .+.. .. ....... ...........+||+.|+|||++.+..++.++|||||||++|
T Consensus 181 ~~~~-----~~~~--~~-------------~~~~~~~-~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (382)
T cd05625 181 ANCR-----CGDR--LK-------------PLERRAA-RQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 239 (382)
T ss_pred cccc-----cccc--cc-------------chhhhhc-cccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHH
Confidence 0000 0000 00 0000000 000000112257999999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc--CCCCccccccCchHHHHHHHcCCCCCCCCCC---hHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt---a~eiL~hp~~~~~ 367 (720)
||++ ||............+.. ....|......+...+||.+|+ .+|.+|++ +.++++||||...
T Consensus 240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 240 EMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence 9999 67665544333333321 1111222234456669999987 59999987 9999999999875
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.8e-32 Score=301.29 Aligned_cols=212 Identities=16% Similarity=0.174 Sum_probs=158.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|+.+|++++|||||++++ ++.... ..+++||+.+++|.+++.... .+++.+++.|+.||+.||.|||++||||
T Consensus 131 ~~E~~il~~l~HpnIv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~ylH~~~IvH 205 (391)
T PHA03212 131 ATEAHILRAINHPSIIQLKG-TFTYNK---FTCLILPRYKTDLYCYLAAKR-NIAICDILAIERSVLRAIQYLHENRIIH 205 (391)
T ss_pred HHHHHHHHhCCCCCCCCEeE-EEEECC---eeEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 36888999999999999999 554443 579999997789999985543 4899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++....... .
T Consensus 206 rDiKP~NIll~~~~~vkL~DFG~a~~~~~~~---------------------------------~--------------- 237 (391)
T PHA03212 206 RDIKAENIFINHPGDVCLGDFGAACFPVDIN---------------------------------A--------------- 237 (391)
T ss_pred CCCChHhEEEcCCCCEEEEeCCccccccccc---------------------------------c---------------
Confidence 9999999999999999999998873210000 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.......||+.|+|||++.+..++.++|||||||++|||
T Consensus 238 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~el 276 (391)
T PHA03212 238 -----------------------------------------NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEM 276 (391)
T ss_pred -----------------------------------------cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHH
Confidence 000114689999999999988899999999999999999
Q ss_pred cc---cCCCCc------hHHHHHHHhhc--CCCCcc-----------------------------c--cccCc-hHHHHH
Q 004998 305 FC---PFSTGE------EKTRTMSSLRH--RVLPPQ-----------------------------L--LLKFP-KEASFC 341 (720)
Q Consensus 305 lt---pf~~~~------~~~~~~~~l~~--~~~p~~-----------------------------~--~~~~p-~~~~li 341 (720)
++ ||.... .....+..+.. +..|.. + ....| ...+||
T Consensus 277 ltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li 356 (391)
T PHA03212 277 ATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLI 356 (391)
T ss_pred HHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHH
Confidence 98 333211 00001111100 000000 0 00112 344899
Q ss_pred HHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 342 LWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
.+||++||.+|||+.|+|+||||.....+
T Consensus 357 ~~mL~~dP~~Rpta~elL~hp~f~~~~~~ 385 (391)
T PHA03212 357 CKMLAFDAHHRPSAEALLDFAAFQDIPDP 385 (391)
T ss_pred HHHhcCChhhCCCHHHHhcChhhccCCCC
Confidence 99999999999999999999999886443
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.9e-32 Score=298.33 Aligned_cols=244 Identities=16% Similarity=0.218 Sum_probs=165.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|..++||||+++++ .+.++. .+|+|||| .|++|.+++...+ .+++..++.|+.||+.||+|||++||+
T Consensus 49 ~~E~~il~~l~h~~iv~~~~-~~~~~~---~~~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~~iv 123 (364)
T cd05599 49 RAERDILAEADNPWVVKLYY-SFQDEN---YLYLIMEYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIHKLGYI 123 (364)
T ss_pred HHHHHHHHhCCCCCCcceEE-EEEcCC---eEEEEECCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 35777999999999999999 555543 67999999 8999999995544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++.............. .....+.+. .++........
T Consensus 124 H~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~-------~~~~~~~~~---------~~~~~~~~~~~----- 182 (364)
T cd05599 124 HRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRI-------LSHALPSNF---------LDFISKPMSSK----- 182 (364)
T ss_pred eccCCHHHeEECCCCCEEEeecccceecccccccccccc-------ccccccccc---------ccccccccccc-----
Confidence 999999999999999999999999865322110000000 000000000 00000000000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
...+.............+||+.|+|||++.+..++.++|||||||++||
T Consensus 183 -------------------------------~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e 231 (364)
T cd05599 183 -------------------------------RKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYE 231 (364)
T ss_pred -------------------------------ccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHH
Confidence 0000000000000012479999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCCCCC---hHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p---~~~~~~~p~~~~li~~~L~~dP~~Rpt---a~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+...... +......+...+||.+||. +|.+|++ +.++++||||...
T Consensus 232 l~~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~ 302 (364)
T cd05599 232 MLVGYPPFCSDNPQ-ETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV 302 (364)
T ss_pred hhcCCCCCCCCCHH-HHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 999 66554443 233333222111 1111223455699999996 9999997 9999999999986
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.1e-32 Score=292.77 Aligned_cols=232 Identities=20% Similarity=0.245 Sum_probs=179.7
Q ss_pred cccccccccC-----CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-C
Q 004998 30 RALNISGVSD-----RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-G 103 (720)
Q Consensus 30 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ 103 (720)
|.+|.+-|+. +++....+.+....|..+... |. +|+.+|.+|+|+|||++|+ ++..+. .+|||||| .
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~-f~--~Ea~iMk~L~H~~lV~l~g-V~~~~~---piyIVtE~m~ 284 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEA-FL--REAQIMKKLRHEKLVKLYG-VCTKQE---PIYIVTEYMP 284 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcccceEEeccccChhH-HH--HHHHHHHhCcccCeEEEEE-EEecCC---ceEEEEEecc
Confidence 4566666665 666655555555555444332 22 7888999999999999999 554443 68999999 9
Q ss_pred CCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCccccccc
Q 004998 104 DVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNT 182 (720)
Q Consensus 104 ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~ 182 (720)
.|+|.+||+. .+..++..+.+.++.||++|++||+++++|||||-..|||+++++.+||+|||+++..+.+...
T Consensus 285 ~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~----- 359 (468)
T KOG0197|consen 285 KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT----- 359 (468)
T ss_pred cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCcee-----
Confidence 9999999965 5666999999999999999999999999999999999999999999999988888643332111
Q ss_pred ccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccC
Q 004998 183 QNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQ 262 (720)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~ 262 (720)
.....
T Consensus 360 ---------------------------------------------------------------------------~~~~~ 364 (468)
T KOG0197|consen 360 ---------------------------------------------------------------------------ASEGG 364 (468)
T ss_pred ---------------------------------------------------------------------------ecCCC
Confidence 00112
Q ss_pred CCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHH
Q 004998 263 PFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA 338 (720)
Q Consensus 263 ~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~ 338 (720)
.+| ..|.|||.+....++.+||||||||+||||+| ||+..... +....+..+..-|.... +|...
T Consensus 365 kfP---------IkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~-ev~~~le~GyRlp~P~~-CP~~v 433 (468)
T KOG0197|consen 365 KFP---------IKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE-EVLELLERGYRLPRPEG-CPDEV 433 (468)
T ss_pred CCC---------ceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH-HHHHHHhccCcCCCCCC-CCHHH
Confidence 233 34899999999999999999999999999999 66665444 66777777665555443 55554
Q ss_pred -HHHHHcCCCCCCCCCChHHHH
Q 004998 339 -SFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 339 -~li~~~L~~dP~~Rpta~eiL 359 (720)
+++..||+.+|++|||.+.+.
T Consensus 434 Y~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 434 YELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred HHHHHHHhhCCcccCCCHHHHH
Confidence 999999999999999998554
|
|
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.6e-32 Score=294.61 Aligned_cols=209 Identities=16% Similarity=0.190 Sum_probs=161.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ ++.+.. .+|+|||| .|++|.+++.+....+++..++.++.||+.||.|||++||
T Consensus 48 ~~~e~~i~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i 123 (330)
T cd05601 48 FEEERDILSISNSPWIPQLQY-AFQDKD---NLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGY 123 (330)
T ss_pred HHHHHHHHHhCCCCCCcceee-EEecCC---eEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346677888999999999998 555443 57999999 8999999996655569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++.........
T Consensus 124 ~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~--------------------------------------------- 158 (330)
T cd05601 124 VHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV--------------------------------------------- 158 (330)
T ss_pred EcccCchHheEECCCCCEEeccCCCCeECCCCCce---------------------------------------------
Confidence 99999999999999999999999887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc------CCCCCccccchh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA------GAPVSCASDIYR 296 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~------~~~~s~~sDIwS 296 (720)
......||+.|+|||++. +..++.++||||
T Consensus 159 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diws 194 (330)
T cd05601 159 --------------------------------------------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWS 194 (330)
T ss_pred --------------------------------------------eeecccCCccccCHHHhccccccccCCCCCcceeec
Confidence 001136899999999986 445789999999
Q ss_pred hhhhhhhccc---cCCCCchHHHHHHHhhcCCC---CccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVL---PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~~---p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++|||++ ||...... ..+..+..... .+......+...+|+.+||. +|.+|||+.++++||||...
T Consensus 195 lG~il~el~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~ 269 (330)
T cd05601 195 LGVIAYEMIYGRSPFHEGTSA-KTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI 269 (330)
T ss_pred ccceeeeeccCCCCCCCCCHH-HHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence 9999999999 67654443 23333332211 11112233455699999998 99999999999999999875
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-32 Score=295.92 Aligned_cols=204 Identities=16% Similarity=0.247 Sum_probs=159.4
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++..+ +||||+++++ ++.... .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++||+
T Consensus 44 ~e~~~l~~~~~h~~iv~~~~-~~~~~~---~~~iv~Ey~~~g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~lH~~~iv 118 (320)
T cd05590 44 TEKRILSLARNHPFLTQLYC-CFQTPD---RLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEITSALMFLHDKGII 118 (320)
T ss_pred HHHHHHHhccCCCchhceee-EEEcCC---EEEEEEcCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 455556554 7999999999 555443 57999999 8999999995543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++....... .
T Consensus 119 H~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~---------------------------------~-------------- 151 (320)
T cd05590 119 YRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG---------------------------------K-------------- 151 (320)
T ss_pred eCCCCHHHeEECCCCcEEEeeCCCCeecCcCC---------------------------------C--------------
Confidence 99999999999999999999998873210000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 188 (320)
T cd05590 152 -------------------------------------------TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYE 188 (320)
T ss_pred -------------------------------------------cccccccCccccCHHHHcCCCCCCccchhhhHHHHHH
Confidence 0011468999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCCh------HHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpta------~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+...... ++. ..+...+|+.+||+.||.+||++ +++++||||...
T Consensus 189 l~~g~~Pf~~~~~~-~~~~~i~~~~~~--~~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~ 259 (320)
T cd05590 189 MLCGHAPFEAENED-DLFEAILNDEVV--YPTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL 259 (320)
T ss_pred HhhCCCCCCCCCHH-HHHHHHhcCCCC--CCCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence 999 67655443 333334332211 112 23445599999999999999998 999999999875
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.5e-32 Score=296.34 Aligned_cols=210 Identities=15% Similarity=0.196 Sum_probs=158.6
Q ss_pred eeehhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.+++||||+++++++.... .....+|++||+.+++|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 61 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ 138 (343)
T cd07878 61 TYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHSAG 138 (343)
T ss_pred HHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346888999999999999999433221 22345799999999999998853 24999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++......
T Consensus 139 ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~----------------------------------------------- 171 (343)
T cd07878 139 IIHRDLKPSNVAVNEDCELRILDFGLARQADDE----------------------------------------------- 171 (343)
T ss_pred eecccCChhhEEECCCCCEEEcCCccceecCCC-----------------------------------------------
Confidence 999999999999999999999988877321100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvl 300 (720)
....+||++|+|||++.+ ..++.++|||||||+
T Consensus 172 ----------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 205 (343)
T cd07878 172 ----------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 205 (343)
T ss_pred ----------------------------------------------cCCccccccccCchHhcCCccCCchhhhHhHHHH
Confidence 001367999999999977 458999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhc--CCC-----------------------Cc-----cccccCchHHHHHHHcCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRH--RVL-----------------------PP-----QLLLKFPKEASFCLWLLHP 347 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~--~~~-----------------------p~-----~~~~~~p~~~~li~~~L~~ 347 (720)
+|+|++ ||........ ...+.. +.. +. .+....+...+|+.+||++
T Consensus 206 l~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~ 284 (343)
T cd07878 206 MAELLKGKALFPGNDYIDQ-LKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVL 284 (343)
T ss_pred HHHHHHCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCC
Confidence 999999 5654332211 111110 000 00 0111223445999999999
Q ss_pred CCCCCCChHHHHcCcccCCCcc
Q 004998 348 EPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||.+|||+.|+|+||||.....
T Consensus 285 dp~~R~s~~ell~hp~~~~~~~ 306 (343)
T cd07878 285 DSDKRISASEALAHPYFSQYHD 306 (343)
T ss_pred ChhhCCCHHHHhcCcchhccCC
Confidence 9999999999999999987644
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-32 Score=300.87 Aligned_cols=250 Identities=12% Similarity=0.162 Sum_probs=165.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|.+++||||+++++ .+.++. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||+|||++||+
T Consensus 49 ~~E~~il~~l~h~~iv~~~~-~~~~~~---~~~lv~E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~~iv 123 (376)
T cd05598 49 KAERDILAEADNEWVVKLYY-SFQDKD---NLYFVMDYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESVHKMGFI 123 (376)
T ss_pred HHHHHHHHhCCCCCcceEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 36778999999999999999 555443 68999999 8999999995544 489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||+|..+........+.. .+. .. .......
T Consensus 124 HrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~-------------------------~~~--~~--~~~~~~~ 174 (376)
T cd05598 124 HRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQK-------------------------GDH--HR--QDSMEPS 174 (376)
T ss_pred eCCCCHHHEEECCCCCEEEEeCCCCcccccccccccccc-------------------------ccc--cc--ccccccc
Confidence 999999999999999999999999854421110000000 000 00 0000000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
........ ... ...................+||+.|+|||++.+..++.++|||||||++||
T Consensus 175 ~~~~~~~~-------------~~~-----~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 175 EEWSEIDR-------------CRL-----KPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred cccccccc-------------ccc-----cchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 00000000 000 000000000000011123589999999999999889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc--CCCCccccccCchHHHHHHHcCCCCCCCCC---ChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p~~~~li~~~L~~dP~~Rp---ta~eiL~hp~~~~~ 367 (720)
|++ ||............... ....+......+...+||.+|+ .+|.+|+ ++.++++||||...
T Consensus 237 ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~ 307 (376)
T cd05598 237 MLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI 307 (376)
T ss_pred hhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence 999 67655443222222211 1111112223445569999977 5999999 99999999999875
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-32 Score=306.73 Aligned_cols=210 Identities=20% Similarity=0.253 Sum_probs=166.0
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+|..+|+.++|||||++++ .+..+. .+|+|||| .|++|.++|.. ...++++.++..++.||+.||.|||++
T Consensus 113 ~~E~~~l~~l~Hpniv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~ 188 (478)
T PTZ00267 113 RSELHCLAACDHFGIVKHFD-DFKSDD---KLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR 188 (478)
T ss_pred HHHHHHHHhCCCCCEeEEEE-EEEECC---EEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 36788999999999999999 555443 68999999 89999998843 234589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++..+...... +
T Consensus 189 ~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~-------------------------------~----------- 226 (478)
T PTZ00267 189 KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL-------------------------------D----------- 226 (478)
T ss_pred CEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc-------------------------------c-----------
Confidence 9999999999999999999999999987432110000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+..++.++|||||||+
T Consensus 227 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~ 260 (478)
T PTZ00267 227 ----------------------------------------------VASSFCGTPYYLAPELWERKRYSKKADMWSLGVI 260 (478)
T ss_pred ----------------------------------------------cccccCCCccccCHhHhCCCCCCcHHhHHHHHHH
Confidence 0011468999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... ..+..+..+..++......+...+||.+||+.||++||++.+++.|||+...
T Consensus 261 l~el~tg~~Pf~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~ 329 (478)
T PTZ00267 261 LYELLTLHRPFKGPSQR-EIMQQVLYGKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYV 329 (478)
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHHH
Confidence 999999 66654443 3344444343433322334556699999999999999999999999998654
|
|
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6e-32 Score=295.95 Aligned_cols=212 Identities=20% Similarity=0.230 Sum_probs=159.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++..++||||+++++ ++.... ....+|+||||.+++|.+++.. .+++..+..++.||+.||.|||+
T Consensus 69 ~~~~E~~~l~~l~h~~ii~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~ 144 (364)
T cd07875 69 RAYRELVLMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS 144 (364)
T ss_pred HHHHHHHHHHhcCCCCccccce-eecccccccccCeEEEEEeCCCCCHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhh
Confidence 3346788999999999999999 443322 2235799999977789998843 38899999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||++...+...
T Consensus 145 ~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~-------------------------------------------- 180 (364)
T cd07875 145 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-------------------------------------------- 180 (364)
T ss_pred CCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCC--------------------------------------------
Confidence 999999999999999999999999998874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 181 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~ 213 (364)
T cd07875 181 -----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213 (364)
T ss_pred -----------------------------------------------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHH
Confidence 001136799999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCC-Ccc-------------------------------c--------cccCch
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVL-PPQ-------------------------------L--------LLKFPK 336 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~-p~~-------------------------------~--------~~~~p~ 336 (720)
++|||++ ||............+..... ++. . ....+.
T Consensus 214 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (364)
T cd07875 214 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 293 (364)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHH
Confidence 9999999 67654433222111110000 000 0 001123
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 337 ~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
..+||.+||+.||.+|||+.|+|+||||....+
T Consensus 294 ~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~ 326 (364)
T cd07875 294 ARDLLSKMLVIDASKRISVDEALQHPYINVWYD 326 (364)
T ss_pred HHHHHHHhcCcCcccCCCHHHHhcCcccccccC
Confidence 459999999999999999999999999986433
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-32 Score=284.41 Aligned_cols=203 Identities=20% Similarity=0.259 Sum_probs=150.0
Q ss_pred cccCCCCCceecccceeec-CCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Q 004998 71 LTHGDHLRNQGGLSGVCEN-EAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 71 Ls~l~HpnIV~l~~~~~~~-~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
|.+++||||+++++.+... ......++++|||..++|.+++.. ....+++.+++.++.||+.||.|||++||+|||||
T Consensus 56 l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dik 135 (288)
T cd07863 56 LEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLK 135 (288)
T ss_pred hhhcCCCCeeeeeeeeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 4456899999999943322 223446899999966799999954 33458999999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccC
Q 004998 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+|||++.++.+||+|||++.......
T Consensus 136 p~Nili~~~~~~kl~dfg~~~~~~~~~----------------------------------------------------- 162 (288)
T cd07863 136 PENILVTSGGQVKLADFGLARIYSCQM----------------------------------------------------- 162 (288)
T ss_pred HHHEEECCCCCEEECccCccccccCcc-----------------------------------------------------
Confidence 999999999999999988773321100
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc--
Q 004998 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt-- 306 (720)
......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 163 --------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~ 204 (288)
T cd07863 163 --------------------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 204 (288)
T ss_pred --------------------------------------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCC
Confidence 0011357899999999998889999999999999999998
Q ss_pred -cCCCCchHHHHHHHhhc-----------------CCCCc-------cccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 307 -PFSTGEEKTRTMSSLRH-----------------RVLPP-------QLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 307 -pf~~~~~~~~~~~~l~~-----------------~~~p~-------~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||............+.. ..+.+ ......+. ..+|+.+||++||.+|||+.|++.
T Consensus 205 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 205 PLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 44433322111111110 00000 01112233 359999999999999999999999
Q ss_pred Cccc
Q 004998 361 SEFL 364 (720)
Q Consensus 361 hp~~ 364 (720)
||||
T Consensus 285 hp~f 288 (288)
T cd07863 285 HPFF 288 (288)
T ss_pred CCCC
Confidence 9998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-32 Score=300.22 Aligned_cols=254 Identities=13% Similarity=0.140 Sum_probs=164.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++|||||++++ ++.+.. .+|+|||| .|++|.+++... ..+++..++.++.||+.||.|||++||
T Consensus 48 ~~~E~~il~~l~hp~iv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~gi 122 (377)
T cd05629 48 VKAERDVLAESDSPWVVSLYY-SFQDAQ---YLYLIMEFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKLGF 122 (377)
T ss_pred HHHHHHHHHhCCCCCcceEEE-EEEcCC---eeEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 346777899999999999999 555543 68999999 899999999554 458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||++..+............ .......+. .+ ...+... .
T Consensus 123 vHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~-~~~~~~~~~--~~----------~~~~~~~-------~ 182 (377)
T cd05629 123 IHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKL-LQGKSNKNR--ID----------NRNSVAV-------D 182 (377)
T ss_pred eccCCCHHHEEECCCCCEEEeeccccccccccccccccccc-ccccccccc--cc----------ccccccc-------c
Confidence 99999999999999999999999998643221100000000 000000000 00 0000000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
..+ .... ......+.+ ..........+||+.|+|||++.+..++.++|||||||++|
T Consensus 183 ~~~----~~~~---------~~~~~~~~~----------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ 239 (377)
T cd05629 183 SIN----LTMS---------SKDQIATWK----------KNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMF 239 (377)
T ss_pred ccc----cccc---------chhhhhhhh----------hcccccccccCCCccccCHHHHccCCCCCceeeEecchhhh
Confidence 000 0000 000000000 00000111257999999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCC---CCccccccCchHHHHHHHcCCCCCCCC---CChHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRV---LPPQLLLKFPKEASFCLWLLHPEPSGR---PKMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~---~p~~~~~~~p~~~~li~~~L~~dP~~R---pta~eiL~hp~~~~~ 367 (720)
||++ ||...... ..+..+.... ..|......+...+||.+||. +|.+| +++.|+++||||...
T Consensus 240 elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 240 ECLIGWPPFCSENSH-ETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred hhhcCCCCCCCCCHH-HHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 9999 66554433 2233332211 111111233455699999997 77765 599999999999875
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-32 Score=293.00 Aligned_cols=207 Identities=18% Similarity=0.181 Sum_probs=159.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ- 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~- 140 (720)
+..+|..+|.+++||||+++++ ++..+. .+++|||| .|++|.+++.... .+++..+..++.||+.||.|||+.
T Consensus 49 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~ 123 (331)
T cd06649 49 QIIRELQVLHECNSPYIVGFYG-AFYSDG---EISICMEHMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLREKH 123 (331)
T ss_pred HHHHHHHHHHHCCCCCCCeEEE-EEEECC---EEEEEeecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 3447888999999999999999 444443 57999999 8999999995543 489999999999999999999986
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+|+||||||+|||++.++.++|+|||++......
T Consensus 124 ~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---------------------------------------------- 157 (331)
T cd06649 124 QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------------------------------- 157 (331)
T ss_pred CEEcCCCChhhEEEcCCCcEEEccCccccccccc----------------------------------------------
Confidence 6999999999999999999999998877322100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 158 ----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~i 191 (331)
T cd06649 158 ----------------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 191 (331)
T ss_pred ----------------------------------------------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHH
Confidence 0001367999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhh----------------------------------------------cCCCCcccc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLR----------------------------------------------HRVLPPQLL 331 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~----------------------------------------------~~~~p~~~~ 331 (720)
+|||++ ||...... .....+. ....+....
T Consensus 192 l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (331)
T cd06649 192 LVELAIGRYPIPPPDAK-ELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPN 270 (331)
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCC
Confidence 999999 66543221 1111111 111111111
Q ss_pred c-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 332 L-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 332 ~-~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
. ..++..+||.+||.+||++|||+.+||+||||+..
T Consensus 271 ~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 271 GVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred ccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence 1 22445699999999999999999999999999865
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-32 Score=295.57 Aligned_cols=206 Identities=18% Similarity=0.201 Sum_probs=156.0
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
.|..+|.+++||||+++++ ++.... ..++|||+..++|.+++......+++..++.|+.||+.||.|||++|||||
T Consensus 106 ~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr 181 (357)
T PHA03209 106 IEAMLLQNVNHPSVIRMKD-TLVSGA---ITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHR 181 (357)
T ss_pred HHHHHHHhCCCCCCcChhh-eEEeCC---eeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 5788999999999999999 444443 578999997789999996666679999999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+|||++.++.++|+|||.+.......
T Consensus 182 Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~-------------------------------------------------- 211 (357)
T PHA03209 182 DVKTENIFINDVDQVCIGDLGAAQFPVVAP-------------------------------------------------- 211 (357)
T ss_pred CCCHHHEEECCCCCEEEecCccccccccCc--------------------------------------------------
Confidence 999999999999999999998873210000
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhcc
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 305 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLl 305 (720)
......||+.|+|||++.+..++.++|||||||++|||+
T Consensus 212 -----------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell 250 (357)
T PHA03209 212 -----------------------------------------AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEML 250 (357)
T ss_pred -----------------------------------------ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHH
Confidence 000135899999999999988999999999999999999
Q ss_pred c----cCCCCch---------HHHHHHHhhc-CCCCcccc-------------------------------ccCchHHHH
Q 004998 306 C----PFSTGEE---------KTRTMSSLRH-RVLPPQLL-------------------------------LKFPKEASF 340 (720)
Q Consensus 306 t----pf~~~~~---------~~~~~~~l~~-~~~p~~~~-------------------------------~~~p~~~~l 340 (720)
+ +|..... .......+.. +..|..+. .......+|
T Consensus 251 ~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 330 (357)
T PHA03209 251 AYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFL 330 (357)
T ss_pred HcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHH
Confidence 7 2222110 0011111111 11111111 011223479
Q ss_pred HHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 341 CLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 341 i~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|.+||++||.+|||+.|+|+||||+.
T Consensus 331 i~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 331 VHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred HHHHHcCCcccCcCHHHHhcCchhcc
Confidence 99999999999999999999999985
|
|
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-32 Score=304.28 Aligned_cols=213 Identities=14% Similarity=0.198 Sum_probs=157.3
Q ss_pred ehhhhcccCCCCCceecccceeec----CCCCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCEN----EAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~----~~~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+|..+|..++|||||++++.++.. ......+++||||.+++|.+++. .....+++..++.++.||+.||.|||
T Consensus 108 ~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH 187 (440)
T PTZ00036 108 RELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH 187 (440)
T ss_pred HHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 688899999999999998844322 12223577999997778988873 24456999999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCC-ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
++||+||||||+|||++.++ .+||+|||+++......
T Consensus 188 ~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~------------------------------------------ 225 (440)
T PTZ00036 188 SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ------------------------------------------ 225 (440)
T ss_pred HCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCC------------------------------------------
Confidence 99999999999999998665 69999888874321000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwS 296 (720)
......||+.|+|||++.+. .|+.++||||
T Consensus 226 -------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwS 256 (440)
T PTZ00036 226 -------------------------------------------------RSVSYICSRFYRAPELMLGATNYTTHIDLWS 256 (440)
T ss_pred -------------------------------------------------CcccCCCCcCccCHHHhcCCCCCCcHHHHHH
Confidence 00114679999999998765 4899999999
Q ss_pred hhhhhhhccc---cCCCCchHHHHHHHhhcC------------------CCCc----c----ccccC-chHHHHHHHcCC
Q 004998 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHR------------------VLPP----Q----LLLKF-PKEASFCLWLLH 346 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~------------------~~p~----~----~~~~~-p~~~~li~~~L~ 346 (720)
|||++|||++ ||.+..........+... .+|. . ++... ++..+||.+||.
T Consensus 257 lGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~ 336 (440)
T PTZ00036 257 LGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLK 336 (440)
T ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCC
Confidence 9999999999 555443322222211100 0111 0 11122 344599999999
Q ss_pred CCCCCCCChHHHHcCcccCCCcc
Q 004998 347 PEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+||.+|||+.|+|+||||....+
T Consensus 337 ~dP~~R~ta~e~l~hp~f~~~~~ 359 (440)
T PTZ00036 337 YEPLKRLNPIEALADPFFDDLRD 359 (440)
T ss_pred CChhHCcCHHHHhCChhHHhhhc
Confidence 99999999999999999987643
|
|
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-32 Score=296.77 Aligned_cols=213 Identities=19% Similarity=0.222 Sum_probs=158.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..++..++||||+++++.+.... .....+|++|||.+++|.+++.. .+++..++.++.||+.||.|||++
T Consensus 62 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~ 138 (355)
T cd07874 62 RAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSA 138 (355)
T ss_pred HHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhcccHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4447888999999999999999433222 12235799999977788888843 388999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||+++..+...
T Consensus 139 givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------- 173 (355)
T cd07874 139 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF--------------------------------------------- 173 (355)
T ss_pred CcccCCCChHHEEECCCCCEEEeeCcccccCCCcc---------------------------------------------
Confidence 99999999999999999999999998874321110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 174 ----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~i 207 (355)
T cd07874 174 ----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 207 (355)
T ss_pred ----------------------------------------------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHH
Confidence 0011367999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhc----------------------C------CCCccc-----------cc-cCchH
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRH----------------------R------VLPPQL-----------LL-KFPKE 337 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~----------------------~------~~p~~~-----------~~-~~p~~ 337 (720)
+|+|++ ||............+.. . .++..+ .. .....
T Consensus 208 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (355)
T cd07874 208 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQA 287 (355)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHH
Confidence 999999 66554322111111100 0 000000 00 11234
Q ss_pred HHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 338 ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 338 ~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.+|+.+||.+||++|||+.|+|+||||....+
T Consensus 288 ~~li~~mL~~dP~~Rps~~ell~hp~~~~~~~ 319 (355)
T cd07874 288 RDLLSKMLVIDPAKRISVDEALQHPYINVWYD 319 (355)
T ss_pred HHHHHHHhcCCchhcCCHHHHhcCcchhcccC
Confidence 59999999999999999999999999986544
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-32 Score=297.58 Aligned_cols=206 Identities=16% Similarity=0.211 Sum_probs=160.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++++++||||+++++ ++.++. .+|+|||| .|++|.+++... .+++..+..++.||+.||.|||++||+|
T Consensus 92 ~e~~il~~~~h~~iv~~~~-~~~~~~---~~~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivH 165 (370)
T cd05596 92 EERDIMAHANSEWIVQLHY-AFQDDK---YLYMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSMGFIH 165 (370)
T ss_pred HHHHHHHhCCCCCcceEEE-EEecCC---EEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 5677899999999999998 555543 68999999 899999998543 3899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||.+........
T Consensus 166 rDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~------------------------------------------------ 197 (370)
T cd05596 166 RDVKPDNMLLDKSGHLKLADFGTCMKMDANGM------------------------------------------------ 197 (370)
T ss_pred cCCCHHHEEEcCCCCEEEEeccceeeccCCCc------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC----CCCccccchhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----PVSCASDIYRLGVL 300 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~s~~sDIwSLGvl 300 (720)
......+||+.|+|||++.+. .++.++|||||||+
T Consensus 198 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvi 236 (370)
T cd05596 198 -----------------------------------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 236 (370)
T ss_pred -----------------------------------------ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHH
Confidence 000114689999999998654 37899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p---~~~~~~~p~~~~li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... ..+..+...... |......+...+||.+||..+|.+ |+++.++++||||+..
T Consensus 237 lyelltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 237 LYEMLVGDTPFYADSLV-GTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND 310 (370)
T ss_pred HHHHHhCCCCcCCCCHH-HHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence 999999 66654443 333444332211 111122344459999999999987 9999999999999874
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=288.60 Aligned_cols=206 Identities=18% Similarity=0.254 Sum_probs=162.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..+|..++||||+++++ ++..+. .+|++||| .|++|.+++.+.+ .+++..+..++.||+.||.|||++||+
T Consensus 48 ~~E~~il~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~iv 122 (323)
T cd05584 48 KAERNILEAVKHPFIVDLIY-AFQTGG---KLYLILEYLSGGELFMHLEREG-IFMEDTACFYLSEISLALEHLHQQGII 122 (323)
T ss_pred HHHHHHHHhCCCCchhceee-EEecCC---eEEEEEeCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 46777999999999999999 554443 57999999 8999999995544 489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++....... .
T Consensus 123 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------------~-------------- 155 (323)
T cd05584 123 YRDLKPENILLDAQGHVKLTDFGLCKESIHEG---------------------------------T-------------- 155 (323)
T ss_pred cCCCCHHHeEECCCCCEEEeeCcCCeecccCC---------------------------------C--------------
Confidence 99999999999999999999998873210000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 156 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 192 (323)
T cd05584 156 -------------------------------------------VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYD 192 (323)
T ss_pred -------------------------------------------cccccCCCccccChhhccCCCCCCcceecccHHHHHH
Confidence 0011468999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+.....+ ......+...+||.+||+++|++|| ++.++++||||...
T Consensus 193 ll~G~~pf~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 193 MLTGAPPFTAENRK-KTIDKILKGKLN-LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred HhcCCCCCCCCCHH-HHHHHHHcCCCC-CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 999 66654443 333333332221 1112234556999999999999999 89999999999875
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.5e-32 Score=291.66 Aligned_cols=205 Identities=18% Similarity=0.273 Sum_probs=158.0
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++..+ +||||+++++ ++.+.. .+|+|||| .|++|.+++.+. ..+++..++.++.||+.||.|||++||+
T Consensus 44 ~e~~il~~~~~hp~Iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~iv 118 (329)
T cd05588 44 TEKHVFETASNHPFLVGLHS-CFQTES---RLFFVIEFVSGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHERGII 118 (329)
T ss_pred HHHHHHHhccCCCCCCceEE-EEEcCC---EEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 566677776 7999999999 555543 67999999 899999998544 3599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++...-.. .+
T Consensus 119 H~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~---------------------------------~~-------------- 151 (329)
T cd05588 119 YRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP---------------------------------GD-------------- 151 (329)
T ss_pred ecCCCHHHeEECCCCCEEECcCccccccccC---------------------------------CC--------------
Confidence 9999999999999999999999887321000 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....+||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~e 188 (329)
T cd05588 152 -------------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFE 188 (329)
T ss_pred -------------------------------------------ccccccCCccccCHHHHcCCCCCCccceechHHHHHH
Confidence 0011468999999999999889999999999999999
Q ss_pred ccc---cCCCC--------chHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCC------hHHHHcCcccC
Q 004998 304 LFC---PFSTG--------EEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLN 365 (720)
Q Consensus 304 Llt---pf~~~--------~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpt------a~eiL~hp~~~ 365 (720)
|++ ||... .........+..... .++. ..+...+|+.+||++||.+||+ +.++++||||.
T Consensus 189 l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~ 266 (329)
T cd05588 189 MMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI--RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFR 266 (329)
T ss_pred HHHCCCCcccccccccccccchHHHHHHHHcCCC--CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCC
Confidence 999 66421 111122222332221 1122 2345569999999999999987 78999999997
Q ss_pred CC
Q 004998 366 EP 367 (720)
Q Consensus 366 ~~ 367 (720)
..
T Consensus 267 ~~ 268 (329)
T cd05588 267 NI 268 (329)
T ss_pred CC
Confidence 64
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-32 Score=290.13 Aligned_cols=204 Identities=16% Similarity=0.246 Sum_probs=159.3
Q ss_pred ehhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.. .+||||+++++ ++.... .+|+|||| .+++|..++.+.. .+++..++.++.||+.||.|||++||+
T Consensus 44 ~e~~il~~~~~hp~i~~~~~-~~~~~~---~~~lv~E~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~iv 118 (321)
T cd05591 44 TEKRILALAAKHPFLTALHC-CFQTKD---RLFFVMEYVNGGDLMFQIQRSR-KFDEPRSRFYAAEVTLALMFLHRHGVI 118 (321)
T ss_pred HHHHHHHhccCCCCccceee-EEEcCC---eEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 45556654 48999999999 555543 57999999 8999999995543 489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++.......
T Consensus 119 HrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~------------------------------------------------ 150 (321)
T cd05591 119 YRDLKLDNILLDAEGHCKLADFGMCKEGILNG------------------------------------------------ 150 (321)
T ss_pred ccCCCHHHeEECCCCCEEEeecccceecccCC------------------------------------------------
Confidence 99999999999999999999999873210000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.......||+.|+|||++.+..++.++|||||||++||
T Consensus 151 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~e 188 (321)
T cd05591 151 ------------------------------------------VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYE 188 (321)
T ss_pred ------------------------------------------ccccccccCccccCHHHHcCCCCCCccceechhHHHHH
Confidence 00011468999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCC-CCccccccCchHHHHHHHcCCCCCCCCC-------ChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRP-------KMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~-~p~~~~~~~p~~~~li~~~L~~dP~~Rp-------ta~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+.... ..|. ...+...+|+.+||++||++|| ++.++++||||...
T Consensus 189 l~tg~~Pf~~~~~~-~~~~~i~~~~~~~p~--~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~ 260 (321)
T cd05591 189 MMAGQPPFEADNED-DLFESILHDDVLYPV--WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI 260 (321)
T ss_pred HhcCCCCCCCCCHH-HHHHHHHcCCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence 999 67665544 3333333322 1121 1224455999999999999999 89999999999764
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-32 Score=295.08 Aligned_cols=240 Identities=16% Similarity=0.236 Sum_probs=164.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++.+++||||+++++ .+.+.. .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++||+
T Consensus 49 ~~e~~~l~~l~~~~iv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~L~~lH~~giv 123 (360)
T cd05627 49 RAERDILVEADGAWVVKMFY-SFQDKR---NLYLIMEFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLAIDAIHQLGFI 123 (360)
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEEcCC---EEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 35667889999999999999 555543 68999999 8999999995543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++............... ....+ .++.+.......
T Consensus 124 HrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~-------~~~~~------------~~~~~~~~~~~~---- 180 (360)
T cd05627 124 HRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNL-------THNPP------------SDFSFQNMNSKR---- 180 (360)
T ss_pred ccCCCHHHEEECCCCCEEEeeccCCccccccccccccccc-------ccCCc------------cccccccccccc----
Confidence 9999999999999999999999998654221100000000 00000 011000000000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
..+.............+||+.|+|||++.+..++.++|||||||++||
T Consensus 181 --------------------------------~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilye 228 (360)
T cd05627 181 --------------------------------KAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYE 228 (360)
T ss_pred --------------------------------ccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeee
Confidence 000000000000112579999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcC----CCCccccccCchHHHHHHHcCCCCCCCCC---ChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~----~~p~~~~~~~p~~~~li~~~L~~dP~~Rp---ta~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+... .+|+. ....+...+||.+|+. ||.+|+ ++.++++||||...
T Consensus 229 l~tG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~-~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~ 299 (360)
T cd05627 229 MLIGYPPFCSETPQ-ETYRKVMNWKETLVFPPE-VPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGV 299 (360)
T ss_pred cccCCCCCCCCCHH-HHHHHHHcCCCceecCCC-CCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCC
Confidence 999 66554443 233333321 12221 1233455699999874 999998 58999999999986
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=283.53 Aligned_cols=203 Identities=17% Similarity=0.129 Sum_probs=157.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-c
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-Q 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~ 140 (720)
+..+|..+|.+++|||||++++.+.........++++||| .||+|.+++.+. ..+++.....++.|++.||.|||+ .
T Consensus 64 ~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~ 142 (283)
T PHA02988 64 ITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYT 142 (283)
T ss_pred HHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhcC
Confidence 3347888999999999999999433322333468999999 999999999554 358999999999999999999998 5
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+++||||||+|||++.++.+|++|||++...... .
T Consensus 143 ~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~----------------------------------~----------- 177 (283)
T PHA02988 143 NKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP----------------------------------P----------- 177 (283)
T ss_pred CCCCCcCChhhEEECCCCcEEEcccchHhhhccc----------------------------------c-----------
Confidence 9999999999999999999999988877321100 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC--CCCCccccchhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLG 298 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~s~~sDIwSLG 298 (720)
...+||+.|+|||++.+ ..++.++||||||
T Consensus 178 ------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlG 209 (283)
T PHA02988 178 ------------------------------------------------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLG 209 (283)
T ss_pred ------------------------------------------------ccccCcccccCHHHhhhccccccchhhhhHHH
Confidence 01357889999999976 5699999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCcccc-ccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~-~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|||++ ||...... .....+......+.++ ...+...+|+.+||+.||++|||+.|+++
T Consensus 210 vil~el~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~ 274 (283)
T PHA02988 210 VVLWEIFTGKIPFENLTTK-EIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILY 274 (283)
T ss_pred HHHHHHHHCCCCCCCCCHH-HHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 99999999 77765443 3333333222223333 23344559999999999999999999985
|
|
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=289.68 Aligned_cols=208 Identities=19% Similarity=0.235 Sum_probs=158.9
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...|..+|.++ +||||+++++ ++.... .+|++||| .|++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 51 ~~~e~~~l~~l~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ 125 (332)
T cd05614 51 TRTERNVLEHVRQSPFLVTLHY-AFQTEA---KLHLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHLHKLG 125 (332)
T ss_pred HHHHHHHHHhccCCCCcccEEE-EEecCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 34677788888 5999999998 554443 57999999 8999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++..+......
T Consensus 126 ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~-------------------------------------------- 161 (332)
T cd05614 126 IVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKE-------------------------------------------- 161 (332)
T ss_pred cEecCCCHHHeEECCCCCEEEeeCcCCccccccCCC--------------------------------------------
Confidence 999999999999999999999999987432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+.. ++.++|||||||+
T Consensus 162 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i 196 (332)
T cd05614 162 ---------------------------------------------RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGIL 196 (332)
T ss_pred ---------------------------------------------ccccccCCccccCHHHhcCCCCCCCccccccchhh
Confidence 001146899999999998764 7899999999999
Q ss_pred hhhccc---cCCCCc---hHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~---~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
+|||++ ||.... ........+... .+.+.... +...+|+.+||+.||++|| ++.++++||||...
T Consensus 197 l~elltg~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 197 IFELLTGASPFTLEGERNTQSEVSRRILKC--DPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred hhhhhcCCCCCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence 999999 664321 112222222221 12222233 4455999999999999999 78899999999875
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-31 Score=288.46 Aligned_cols=204 Identities=18% Similarity=0.275 Sum_probs=158.2
Q ss_pred ehhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.. ++||||+++++ ++.+.. .+|+|||| .|++|.+++... ..+++..+..++.||+.||+|||++||+
T Consensus 44 ~e~~~l~~~~~~~~i~~~~~-~~~~~~---~~~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iv 118 (316)
T cd05620 44 VEKRVLALAWENPFLTHLYC-TFQTKE---HLFFVMEFLNGGDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHSKGII 118 (316)
T ss_pred HHHHHHHhccCCCCccCeeE-EEEeCC---EEEEEECCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 34445543 58999999999 554443 68999999 899999999554 3489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++...... +-
T Consensus 119 HrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----------------------------------~~------------- 151 (316)
T cd05620 119 YRDLKLDNVMLDRDGHIKIADFGMCKENVFG----------------------------------DN------------- 151 (316)
T ss_pred ecCCCHHHeEECCCCCEEeCccCCCeecccC----------------------------------CC-------------
Confidence 9999999999999999999999877321000 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~e 188 (316)
T cd05620 152 -------------------------------------------RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYE 188 (316)
T ss_pred -------------------------------------------ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHH
Confidence 0011468999999999999889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCCh-HHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKM-GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpta-~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+.... +.++. ..++..+|+.+||+.||.+||++ +++++||||...
T Consensus 189 l~~g~~Pf~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~ 254 (316)
T cd05620 189 MLIGQSPFHGDDED-ELFESIRVDT--PHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI 254 (316)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhCC--CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence 999 66654432 3333333221 11122 23455699999999999999997 589999999875
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.3e-33 Score=292.04 Aligned_cols=207 Identities=19% Similarity=0.270 Sum_probs=167.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|+.+|+++++|||.++|+.++... .++++||| .||++.+.|+ .+..+.+.++..++++++.||.|||.++.
T Consensus 58 iqqei~~Ls~~~~~~it~yygsyl~g~----~LwiiMey~~gGsv~~lL~-~~~~~~E~~i~~ilre~l~~l~ylH~~~k 132 (467)
T KOG0201|consen 58 IQQEISVLSQCDSPNITEYYGSYLKGT----KLWIIMEYCGGGSVLDLLK-SGNILDEFEIAVILREVLKGLDYLHSEKK 132 (467)
T ss_pred HHHHHHHHHhcCcchHHhhhhheeecc----cHHHHHHHhcCcchhhhhc-cCCCCccceeeeehHHHHHHhhhhhhcce
Confidence 336888999999999999999444433 57999999 9999999984 44446999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|||||+.|||+..+|.||++|||++......
T Consensus 133 iHrDIKaanil~s~~g~vkl~DfgVa~ql~~~------------------------------------------------ 164 (467)
T KOG0201|consen 133 IHRDIKAANILLSESGDVKLADFGVAGQLTNT------------------------------------------------ 164 (467)
T ss_pred ecccccccceeEeccCcEEEEecceeeeeech------------------------------------------------
Confidence 99999999999999999999999987322110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
..+....+|||.|||||++.+..|+.++||||||++.+
T Consensus 165 ------------------------------------------~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITai 202 (467)
T KOG0201|consen 165 ------------------------------------------VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAI 202 (467)
T ss_pred ------------------------------------------hhccccccccccccchhhhccccccchhhhhhhhHHHH
Confidence 00012268999999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++ |+....+ ...+..| ....||.+...+++ ..+|+..||.+||+.||+|.++|+|+|++..
T Consensus 203 Ela~GePP~s~~hP-mrvlflI-pk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a 269 (467)
T KOG0201|consen 203 ELAKGEPPHSKLHP-MRVLFLI-PKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRA 269 (467)
T ss_pred HHhcCCCCCcccCc-ceEEEec-cCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhc
Confidence 9999 4433333 1222222 33456666666666 6699999999999999999999999999984
|
|
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=289.77 Aligned_cols=206 Identities=18% Similarity=0.270 Sum_probs=156.3
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++.++ +||||+++++ ++.... .+|+|||| .+++|..++... ..+++..++.++.||+.||.|||++||+
T Consensus 44 ~E~~~l~~~~~hp~iv~~~~-~~~~~~---~~~lv~E~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~iv 118 (329)
T cd05618 44 TEKHVFEQASNHPFLVGLHS-CFQTES---RLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGII 118 (329)
T ss_pred HHHHHHHhcCCCCcCCceee-EEEeCC---EEEEEEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 455566554 8999999999 555543 67999999 899999988544 3499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++...-... +
T Consensus 119 H~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~---------------------------------~-------------- 151 (329)
T cd05618 119 YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------------------------D-------------- 151 (329)
T ss_pred eCCCCHHHEEECCCCCEEEeeCCccccccCCC---------------------------------C--------------
Confidence 99999999999999999999998873210000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 188 (329)
T cd05618 152 -------------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFE 188 (329)
T ss_pred -------------------------------------------ccccccCCccccCHHHHcCCCCCCccceecccHHHHH
Confidence 0011468999999999999889999999999999999
Q ss_pred ccc---cCCCC--------chHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC------hHHHHcCcccCC
Q 004998 304 LFC---PFSTG--------EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK------MGELLQSEFLNE 366 (720)
Q Consensus 304 Llt---pf~~~--------~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt------a~eiL~hp~~~~ 366 (720)
|++ ||... .........+..... .......+...+|+.+||+.||.+||+ +.++++||||..
T Consensus 189 l~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~ 267 (329)
T cd05618 189 MMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 267 (329)
T ss_pred HhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC-CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 999 66311 111112222222211 111122345569999999999999998 479999999987
Q ss_pred C
Q 004998 367 P 367 (720)
Q Consensus 367 ~ 367 (720)
.
T Consensus 268 ~ 268 (329)
T cd05618 268 V 268 (329)
T ss_pred C
Confidence 5
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=287.70 Aligned_cols=203 Identities=17% Similarity=0.263 Sum_probs=157.2
Q ss_pred hhhhcc-cCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 67 DGVELT-HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 67 e~~~Ls-~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
|..++. ..+||||+++++ ++..+. .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++||+|
T Consensus 45 e~~~l~~~~~hp~i~~~~~-~~~~~~---~~~lv~e~~~gg~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~~~ivH 119 (316)
T cd05592 45 ERRVLALAWEHPFLTHLFC-TFQTKE---HLFFVMEYLNGGDLMFHIQSSG-RFDEARARFYAAEIICGLQFLHKKGIIY 119 (316)
T ss_pred HHHHHHhccCCCCccceee-EEEcCC---EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 333444 458999999999 554443 68999999 8999999995544 4999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++.......
T Consensus 120 ~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~------------------------------------------------- 150 (316)
T cd05592 120 RDLKLDNVLLDKDGHIKIADFGMCKENMNGE------------------------------------------------- 150 (316)
T ss_pred CCCCHHHeEECCCCCEEEccCcCCeECCCCC-------------------------------------------------
Confidence 9999999999999999999998873210000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
......+||+.|+|||++.+..++.++|||||||++|||
T Consensus 151 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el 189 (316)
T cd05592 151 -----------------------------------------GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEM 189 (316)
T ss_pred -----------------------------------------CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHH
Confidence 000114689999999999998899999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCCh-HHHHcCcccCCC
Q 004998 305 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKM-GELLQSEFLNEP 367 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta-~eiL~hp~~~~~ 367 (720)
++ ||...... .....+.... +.++...+ ...+|+.+||+.||.+||++ .++++||||...
T Consensus 190 l~G~~Pf~~~~~~-~~~~~i~~~~--~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05592 190 LIGQSPFHGEDED-ELFDSILNDR--PHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI 254 (316)
T ss_pred HhCCCCCCCCCHH-HHHHHHHcCC--CCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence 99 67655443 3333333221 12222233 44599999999999999986 588899999875
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.5e-32 Score=283.38 Aligned_cols=207 Identities=17% Similarity=0.201 Sum_probs=160.0
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..|..++..++||||+++++ ++.... .+|++||| .|++|.+++.. ....+++..++.++.||+.||.|||++
T Consensus 41 ~~E~~il~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~ 116 (280)
T cd05608 41 MVEKRILAKVHSRFIVSLAY-AFQTKT---DLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR 116 (280)
T ss_pred HHHHHHHHhCCCCcEeeeeE-EEcCCC---eEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 36777999999999999998 554443 57999999 89999988732 334589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.++|+|||.+........
T Consensus 117 ~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-------------------------------------------- 152 (280)
T cd05608 117 RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-------------------------------------------- 152 (280)
T ss_pred CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--------------------------------------------
Confidence 999999999999999999999999988733211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 153 ----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~i 186 (280)
T cd05608 153 ----------------------------------------------KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVT 186 (280)
T ss_pred ----------------------------------------------cccccCCCcCccCHHHhcCCCCCccccHHHHHHH
Confidence 0001367999999999999999999999999999
Q ss_pred hhhccc---cCCCCchH---HHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEK---TRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~---~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... ......+... +..+....+ ...+|+.+||+.||++|| +++++++||||+..
T Consensus 187 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~ 263 (280)
T cd05608 187 LYEMIAARGPFRARGEKVENKELKQRILND--SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDL 263 (280)
T ss_pred HHHHHhCCCCCCCCCcchhHHHHHHhhccc--CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence 999999 66543221 1111111111 112222333 445999999999999999 88999999999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-31 Score=290.09 Aligned_cols=205 Identities=17% Similarity=0.227 Sum_probs=156.4
Q ss_pred hhhhcccC---CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 67 DGVELTHG---DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 67 e~~~Ls~l---~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
|..++... +||||+++++ .+.... .+|+|||| .+++|.+++.+.+ .+++..++.++.||+.||.|||++||
T Consensus 43 e~~~l~~~~~~~~p~i~~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qil~al~~LH~~~i 117 (330)
T cd05586 43 ERNILVRTLLDESPFIVGLKF-SFQTDS---DLYLVTDYMSGGELFWHLQKEG-RFSEDRAKFYIAELVLALEHLHKYDI 117 (330)
T ss_pred HHHHHHHhccCCCCcCcceEE-EEecCC---eEEEEEcCCCCChHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 33444443 7999999999 555443 57999999 8999999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||++....... .
T Consensus 118 vHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~---------------------------------~------------- 151 (330)
T cd05586 118 VYRDLKPENILLDATGHIALCDFGLSKANLTDN---------------------------------K------------- 151 (330)
T ss_pred EeccCCHHHeEECCCCCEEEecCCcCcCCCCCC---------------------------------C-------------
Confidence 999999999999999999999998873211000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+.. ++.++|||||||++
T Consensus 152 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil 187 (330)
T cd05586 152 --------------------------------------------TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLV 187 (330)
T ss_pred --------------------------------------------CccCccCCccccCHHHHcCCCCCCCccceeccccEE
Confidence 001146899999999997654 89999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC----ChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rp----ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... ..+..+..+..........+...+|+.+||.+||.+|| ++.++++||||...
T Consensus 188 ~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~ 259 (330)
T cd05586 188 FEMCCGWSPFYAEDTQ-QMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI 259 (330)
T ss_pred EEeccCCCCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence 99999 66554333 33444433322111111234456999999999999998 79999999999875
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-31 Score=287.56 Aligned_cols=207 Identities=18% Similarity=0.248 Sum_probs=162.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..+|.+++||||+++++ ++..+. .+|+|||| .+++|.+++.+.. .+++.+++.++.||+.||.|||++|
T Consensus 44 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~ 118 (318)
T cd05582 44 RTKMERDILAEVNHPFIVKLHY-AFQTEG---KLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSLG 118 (318)
T ss_pred HHHHHHHHHHhCCCCCcccEEE-EEEcCC---EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4456778999999999999999 554443 67999999 8999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||++........
T Consensus 119 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~--------------------------------------------- 153 (318)
T cd05582 119 IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--------------------------------------------- 153 (318)
T ss_pred EecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC---------------------------------------------
Confidence 99999999999999999999999988732110000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 154 ---------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il 188 (318)
T cd05582 154 ---------------------------------------------KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 188 (318)
T ss_pred ---------------------------------------------ceecccCChhhcCHHHHcCCCCCCccceeccceEe
Confidence 00114689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|||++ ||...... ..+..+...... ++. ..+...+||.+||++||.+||+ +.+++.||||...
T Consensus 189 ~el~tg~~p~~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~ 260 (318)
T cd05582 189 FEMLTGSLPFQGKDRK-ETMTMILKAKLG--MPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI 260 (318)
T ss_pred eeeccCCCCCCCCCHH-HHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence 99999 66654433 333333322211 112 2344569999999999999999 6779999999875
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=293.20 Aligned_cols=214 Identities=18% Similarity=0.233 Sum_probs=160.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|..++||||+++++ ++.... ....+|++|||.+++|.+++.... .+++..++.++.||+.||.|||++
T Consensus 45 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~ 122 (372)
T cd07853 45 RVFRELKMLCFFKHDNVLSALD-ILQPPHIDPFEEIYVVTELMQSDLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLHSA 122 (372)
T ss_pred HHHHHHHHHHhCCCCCcCCHhh-eecCCCccccceEEEEeeccccCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4457888999999999999999 444332 122579999997789999885543 599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++........ .
T Consensus 123 ~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~-------------------------------------~------ 159 (372)
T cd07853 123 GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDES-------------------------------------K------ 159 (372)
T ss_pred CeeCCCCChHHEEECCCCCEEeccccceeecccCcc-------------------------------------c------
Confidence 999999999999999999999999888743211000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGv 299 (720)
......+|++|+|||++.+.. ++.++|||||||
T Consensus 160 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~ 193 (372)
T cd07853 160 ----------------------------------------------HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGC 193 (372)
T ss_pred ----------------------------------------------cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHH
Confidence 001135789999999998754 799999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHH----------------------h-hcCCCCccc------c-ccCchHHHHHHHcCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSS----------------------L-RHRVLPPQL------L-LKFPKEASFCLWLLH 346 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~----------------------l-~~~~~p~~~------~-~~~p~~~~li~~~L~ 346 (720)
++|||++ ||............ + .....++.. . ...+...+||.+||+
T Consensus 194 il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~ 273 (372)
T cd07853 194 IFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLV 273 (372)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCC
Confidence 9999999 66554332111100 1 111111111 1 122344599999999
Q ss_pred CCCCCCCChHHHHcCcccCCC
Q 004998 347 PEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+||.+|||+.|+|+||||...
T Consensus 274 ~dP~~R~t~~e~l~hp~~~~~ 294 (372)
T cd07853 274 FDPDKRISAADALAHPYLDEG 294 (372)
T ss_pred CChhhCcCHHHHhcCHhhCCC
Confidence 999999999999999999886
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.8e-32 Score=284.10 Aligned_cols=205 Identities=19% Similarity=0.288 Sum_probs=162.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|...+.-+.|||||+||+ +..... .+|+++|+ .+|+|.+||-++...+.+..+++||.||+.|+.|+|+..|||
T Consensus 66 qEVRCMKLVQHpNiVRLYE-ViDTQT---KlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVH 141 (864)
T KOG4717|consen 66 QEVRCMKLVQHPNIVRLYE-VIDTQT---KLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVH 141 (864)
T ss_pred HHHHHHHHhcCcCeeeeee-hhcccc---eEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence 5666788889999999999 443332 68999999 889999999777777999999999999999999999999999
Q ss_pred ccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 145 HNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 145 rDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|||||+|+++- .-|-|||.|||++-.|..-
T Consensus 142 RDLKPENVVFFEKlGlVKLTDFGFSNkf~PG------------------------------------------------- 172 (864)
T KOG4717|consen 142 RDLKPENVVFFEKLGLVKLTDFGFSNKFQPG------------------------------------------------- 172 (864)
T ss_pred ccCCcceeEEeeecCceEeeeccccccCCCc-------------------------------------------------
Confidence 99999998876 6788999888876221000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCC-ccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS-CASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s-~~sDIwSLGvll~ 302 (720)
.+-+..+|+..|-|||++.|..|+ +++||||||||||
T Consensus 173 ------------------------------------------~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILy 210 (864)
T KOG4717|consen 173 ------------------------------------------KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILY 210 (864)
T ss_pred ------------------------------------------chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHH
Confidence 011225899999999999999985 6899999999999
Q ss_pred hccc---cCCCCchHHHHHHHhh-cCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLR-HRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~-~~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.|+| ||...+.....-..+. +...|... ++++ +||..||..||.+|.+.+||..++|++....
T Consensus 211 MLVCGq~PFqeANDSETLTmImDCKYtvPshv----S~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~ 278 (864)
T KOG4717|consen 211 MLVCGQPPFQEANDSETLTMIMDCKYTVPSHV----SKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR 278 (864)
T ss_pred HHHhCCCccccccchhhhhhhhcccccCchhh----hHHHHHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence 9999 7765544432222222 23334333 4444 9999999999999999999999999998744
|
|
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.3e-31 Score=287.79 Aligned_cols=204 Identities=20% Similarity=0.275 Sum_probs=158.5
Q ss_pred ehhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.. ++||||+++++ ++.+.. .+|+|||| .|++|.+++... ..+++.++..++.||+.||.|||++||+
T Consensus 44 ~e~~~l~~~~~hp~iv~~~~-~~~~~~---~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~~iv 118 (316)
T cd05619 44 VEKRVLSLAWEHPFLTHLYC-TFQTKE---NLFFVMEYLNGGDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSKGIV 118 (316)
T ss_pred HHHHHHHhccCCCcCcceEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 34445554 69999999999 554443 58999999 899999999554 3489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++...... +-
T Consensus 119 Hrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~----------------------------------~~------------- 151 (316)
T cd05619 119 YRDLKLDNILLDTDGHIKIADFGMCKENMLG----------------------------------DA------------- 151 (316)
T ss_pred eCCCCHHHEEECCCCCEEEccCCcceECCCC----------------------------------CC-------------
Confidence 9999999999999999999999877321000 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~e 188 (316)
T cd05619 152 -------------------------------------------KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYE 188 (316)
T ss_pred -------------------------------------------ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHH
Confidence 0011468999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChH-HHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMG-ELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~-eiL~hp~~~~~ 367 (720)
|++ ||...... .....+.... +.++... .+..+|+.+||+.||.+||++. ++++||||...
T Consensus 189 l~~G~~pf~~~~~~-~~~~~i~~~~--~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~ 254 (316)
T cd05619 189 MLIGQSPFHGHDEE-ELFQSIRMDN--PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREI 254 (316)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhCC--CCCCccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCC
Confidence 999 66554433 3333333221 1122223 3445999999999999999996 89999999886
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-31 Score=288.86 Aligned_cols=206 Identities=18% Similarity=0.230 Sum_probs=155.2
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--------------------------
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------------------------- 115 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-------------------------- 115 (720)
...|..+|.++ +|||||++++ ++.... ..++++||| .+|+|.++|....
T Consensus 57 ~~~E~~~l~~l~~h~niv~~~~-~~~~~~--~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (338)
T cd05102 57 LMSELKILIHIGNHLNVVNLLG-ACTKPN--GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRV 133 (338)
T ss_pred HHHHHHHHHHhccCcceeeEEe-EecCCC--CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhcc
Confidence 34677788888 8999999999 443322 257999999 9999999995321
Q ss_pred -----------------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCce
Q 004998 116 -----------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHV 160 (720)
Q Consensus 116 -----------------------------------~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~v 160 (720)
..+++.++..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~ 213 (338)
T cd05102 134 DRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVV 213 (338)
T ss_pred ccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcE
Confidence 247788999999999999999999999999999999999999999
Q ss_pred EEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcccccccccc
Q 004998 161 SFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVE 240 (720)
Q Consensus 161 kliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~ 240 (720)
||+|||+++...... .+
T Consensus 214 kl~DfG~a~~~~~~~---------------------------------~~------------------------------ 230 (338)
T cd05102 214 KICDFGLARDIYKDP---------------------------------DY------------------------------ 230 (338)
T ss_pred EEeecccccccccCc---------------------------------ch------------------------------
Confidence 999998874321100 00
Q ss_pred ccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc----cCCCCchHHH
Q 004998 241 GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTR 316 (720)
Q Consensus 241 ~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~ 316 (720)
. ......+++.|+|||++.+..++.++|||||||+||||++ ||........
T Consensus 231 -------~------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~ 285 (338)
T cd05102 231 -------V------------------RKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE 285 (338)
T ss_pred -------h------------------cccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH
Confidence 0 0001245778999999998889999999999999999986 6655433333
Q ss_pred HHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 317 TMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 317 ~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
....+..+..+.......+...+|+.+||+.||.+|||+.|+++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 286 FCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVE 329 (338)
T ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 33444443333222223345569999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-31 Score=288.06 Aligned_cols=204 Identities=19% Similarity=0.247 Sum_probs=159.6
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++..+ +||||+++++ ++.... .+|+|||| .|++|..++.+.. .+++..+..++.||+.||.|||++||+
T Consensus 44 ~e~~il~~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~iv 118 (318)
T cd05570 44 TEKRVLALAGKHPFLTQLHS-CFQTKD---RLFFVMEYVNGGDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLHERGII 118 (318)
T ss_pred HHHHHHHhccCCCCccceee-EEEcCC---EEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 555566665 7999999999 555543 68999999 8999999985543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++...... +.
T Consensus 119 H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~----------------------------------~~------------- 151 (318)
T cd05570 119 YRDLKLDNVLLDSEGHIKIADFGMCKEGILG----------------------------------GV------------- 151 (318)
T ss_pred ccCCCHHHeEECCCCcEEecccCCCeecCcC----------------------------------CC-------------
Confidence 9999999999999999999999877321000 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....+||+.|+|||++.+..++.++|||||||++|+
T Consensus 152 -------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~ 188 (318)
T cd05570 152 -------------------------------------------TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYE 188 (318)
T ss_pred -------------------------------------------cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHH
Confidence 0011368999999999999889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+..... .++... +...+|+.+||+.||.+||++ .++++||||...
T Consensus 189 l~~G~~pf~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 189 MLAGQSPFEGDDED-ELFQSILEDEV--RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred HhhCCCCCCCCCHH-HHHHHHHcCCC--CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 999 67654433 33333332211 112223 344599999999999999999 999999999875
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=286.02 Aligned_cols=201 Identities=18% Similarity=0.209 Sum_probs=157.7
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Q 004998 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 70 ~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
++..++||||+++++ .+.... .+|+|||| .|++|..++.+. ..+++..++.++.||+.||.|||++||+|||||
T Consensus 49 ~~~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~givH~dik 123 (323)
T cd05575 49 LLKNVKHPFLVGLHY-SFQTAD---KLYFVLDYVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSLNIIYRDLK 123 (323)
T ss_pred HHhhCCCCCCCCeeE-EEEeCC---EEEEEEcCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCC
Confidence 567899999999998 554443 67999999 899999999554 358999999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccC
Q 004998 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+|||++.++.+||+|||++....... +
T Consensus 124 p~NIll~~~~~~kl~Dfg~~~~~~~~~---------------------------------~------------------- 151 (323)
T cd05575 124 PENILLDSQGHVVLTDFGLCKEGIEHS---------------------------------K------------------- 151 (323)
T ss_pred HHHeEECCCCcEEEeccCCCcccccCC---------------------------------C-------------------
Confidence 999999999999999998873210000 0
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc--
Q 004998 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt-- 306 (720)
......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 152 --------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~ 193 (323)
T cd05575 152 --------------------------------------TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGL 193 (323)
T ss_pred --------------------------------------ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCC
Confidence 0011468999999999999889999999999999999999
Q ss_pred -cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh----HHHHcCcccCCC
Q 004998 307 -PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 367 (720)
Q Consensus 307 -pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta----~eiL~hp~~~~~ 367 (720)
||...... ..+..+...... ......+...+||.+||+.||.+||++ .++++||||...
T Consensus 194 ~pf~~~~~~-~~~~~i~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~ 257 (323)
T cd05575 194 PPFYSRDTA-EMYDNILNKPLR-LKPNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI 257 (323)
T ss_pred CCCCCCCHH-HHHHHHHcCCCC-CCCCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence 66654433 333333332211 111223455699999999999999987 699999999875
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-31 Score=295.43 Aligned_cols=205 Identities=20% Similarity=0.291 Sum_probs=156.2
Q ss_pred ehhhhcccCC-C-----CCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGD-H-----LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~Ls~l~-H-----pnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.|+.+|.+|+ | -|||++++.++ ... ++|||+|+.+.+|.++|+. ...+++...++.|+.||+.||.+||
T Consensus 231 ~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~-fr~---HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~ 306 (586)
T KOG0667|consen 231 IEIRILELLNKHDPDDKYNIVRMLDYFY-FRN---HLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH 306 (586)
T ss_pred HHHHHHHHHhccCCCCCeeEEEeeeccc-ccc---ceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 7788888887 3 48999999433 333 7899999999999999943 4456999999999999999999999
Q ss_pred HcCceeccCCCCcEEEccC--CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 139 SQGIVVHNVRPSCFVMSSF--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~--~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
+.||||+||||+||||... ..||+||||+++..+.-.
T Consensus 307 ~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~v----------------------------------------- 345 (586)
T KOG0667|consen 307 ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRV----------------------------------------- 345 (586)
T ss_pred hCCeeeccCChhheeeccCCcCceeEEecccccccCCcc-----------------------------------------
Confidence 9999999999999999843 479999999885432110
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchh
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
..++.+..|+|||++.|.+|+.+.||||
T Consensus 346 ----------------------------------------------------ytYiQSRfYRAPEVILGlpY~~~IDmWS 373 (586)
T KOG0667|consen 346 ----------------------------------------------------YTYIQSRFYRAPEVILGLPYDTAIDMWS 373 (586)
T ss_pred ----------------------------------------------------eeeeeccccccchhhccCCCCCccceee
Confidence 0156688999999999999999999999
Q ss_pred hhhhhhhccc--cCCCCchHHHHHHHhhc--CCCCccccc----------------------------------------
Q 004998 297 LGVLLFELFC--PFSTGEEKTRTMSSLRH--RVLPPQLLL---------------------------------------- 332 (720)
Q Consensus 297 LGvll~eLlt--pf~~~~~~~~~~~~l~~--~~~p~~~~~---------------------------------------- 332 (720)
||||++||++ |+.+.+.....+..|.. +.+|+.++.
T Consensus 374 LGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 453 (586)
T KOG0667|consen 374 LGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKA 453 (586)
T ss_pred hhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhh
Confidence 9999999999 43333222222222211 111110000
Q ss_pred ----cCc----------------hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 333 ----KFP----------------KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 333 ----~~p----------------~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
..| ...+|+++||.+||..|+|+.++|+||||.+.
T Consensus 454 ~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~ 508 (586)
T KOG0667|consen 454 RLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGT 508 (586)
T ss_pred cccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccc
Confidence 001 12489999999999999999999999999965
|
|
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-31 Score=291.49 Aligned_cols=206 Identities=17% Similarity=0.223 Sum_probs=158.0
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+++.++||||+++++ ++.++. .+|+|||| .|++|.+++... .+++..++.++.||+.||.|||++||+|
T Consensus 92 ~e~~i~~~~~hp~iv~~~~-~~~~~~---~~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~~IvH 165 (370)
T cd05621 92 EERDIMAFANSPWVVQLFC-AFQDDK---YLYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSMGLIH 165 (370)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEcCC---EEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 5677889999999999999 555543 68999999 899999999543 3899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++........ .
T Consensus 166 rDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~---------------------------------~-------------- 198 (370)
T cd05621 166 RDVKPDNMLLDKHGHLKLADFGTCMKMDETGM---------------------------------V-------------- 198 (370)
T ss_pred cCCCHHHEEECCCCCEEEEecccceecccCCc---------------------------------e--------------
Confidence 99999999999999999999998743211100 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC----CCccccchhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVL 300 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+.. ++.++|||||||+
T Consensus 199 ------------------------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~i 236 (370)
T cd05621 199 ------------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 236 (370)
T ss_pred ------------------------------------------ecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHH
Confidence 001146899999999997643 7899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p---~~~~~~~p~~~~li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... ..+..+...... |......+...+|+.+||..+|.+ |+++.|+++||||+..
T Consensus 237 lyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 237 LFEMLVGDTPFYADSLV-GTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND 310 (370)
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence 999999 67655443 233333322111 111122344559999999865543 8999999999999874
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-31 Score=284.95 Aligned_cols=212 Identities=17% Similarity=0.191 Sum_probs=151.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC--------CCCCCCHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--------PKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~--------~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..+|++++||||+++++ ++.... ...+|++|||.+++|.+++.. ....+++..++.++.||+.||.
T Consensus 45 ~~~E~~~l~~l~h~niv~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~ 122 (317)
T cd07867 45 ACREIALLRELKHPNVIALQK-VFLSHS-DRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIH 122 (317)
T ss_pred HHHHHHHHHhCCCCCeeeEEE-EEeccC-CCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHH
Confidence 346888999999999999999 443322 236899999977899988832 1224889999999999999999
Q ss_pred HHHHcCceeccCCCCcEEE----ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccc
Q 004998 136 AAHSQGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
|||++||+||||||+|||+ +.++.+||+|||+++..+..... .
T Consensus 123 ~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~--------------------------------~- 169 (317)
T cd07867 123 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP--------------------------------L- 169 (317)
T ss_pred HHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCccc--------------------------------c-
Confidence 9999999999999999999 45678999999888543211000 0
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCc
Q 004998 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSC 290 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~ 290 (720)
.......||+.|+|||++.+.. ++.
T Consensus 170 ------------------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~ 195 (317)
T cd07867 170 ------------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTK 195 (317)
T ss_pred ------------------------------------------------------cccCcceecccccCcHHhcCCCccCc
Confidence 0001146799999999997754 899
Q ss_pred cccchhhhhhhhhccc---cCCCCchH---------HHH---H-----------HHhhc-------------CCCC-ccc
Q 004998 291 ASDIYRLGVLLFELFC---PFSTGEEK---------TRT---M-----------SSLRH-------------RVLP-PQL 330 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~---------~~~---~-----------~~l~~-------------~~~p-~~~ 330 (720)
++|||||||++|||++ ||...... ... . ..+.. .... +..
T Consensus 196 ~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (317)
T cd07867 196 AIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSL 275 (317)
T ss_pred HHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchh
Confidence 9999999999999999 55422110 000 0 00000 0000 000
Q ss_pred --------cccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 331 --------LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 331 --------~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
....+...+|+.+||..||.+|||+.|+|+||||
T Consensus 276 ~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 276 IKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred hhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 0011234489999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-32 Score=293.24 Aligned_cols=225 Identities=20% Similarity=0.247 Sum_probs=174.9
Q ss_pred ccccccCCCCccce--eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCC--CHHHH
Q 004998 49 RFGVRGDDSNDFEL--RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSV--DVYEC 123 (720)
Q Consensus 49 ~~~~~~~~~~~~~~--r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l--~~~~~ 123 (720)
||.+..-...++++ --+.|+.+-++|+|.|||+++|.+-+.+ ++-|.||- +||+|..+|+..-+++ ++..+
T Consensus 602 rIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senG----f~kIFMEqVPGGSLSsLLrskWGPlKDNEstm 677 (1226)
T KOG4279|consen 602 RIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENG----FFKIFMEQVPGGSLSSLLRSKWGPLKDNESTM 677 (1226)
T ss_pred EEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCC----eEEEEeecCCCCcHHHHHHhccCCCccchhHH
Confidence 44444444444443 3447777788899999999999432333 78899999 9999999998877778 89999
Q ss_pred HHHHHHHHHHHHHHHHcCceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhh
Q 004998 124 LHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR 202 (720)
Q Consensus 124 ~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 202 (720)
-.|.+||++||.|||.+.|||||||-+|+|++ -+|.+||.|||.++...
T Consensus 678 ~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA------------------------------ 727 (1226)
T KOG4279|consen 678 NFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA------------------------------ 727 (1226)
T ss_pred HHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhc------------------------------
Confidence 99999999999999999999999999999997 68999999999884321
Q ss_pred hcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcc
Q 004998 203 TRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEE 282 (720)
Q Consensus 203 ~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 282 (720)
.. .|.+. ...||..|||||+
T Consensus 728 ------gi-----------------------------------------------------nP~TE-TFTGTLQYMAPEv 747 (1226)
T KOG4279|consen 728 ------GI-----------------------------------------------------NPCTE-TFTGTLQYMAPEV 747 (1226)
T ss_pred ------cC-----------------------------------------------------Ccccc-ccccchhhhChHh
Confidence 00 01111 1579999999999
Q ss_pred ccCCC--CCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCChH
Q 004998 283 LAGAP--VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMG 356 (720)
Q Consensus 283 l~~~~--~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~li~~~L~~dP~~Rpta~ 356 (720)
+..++ |+.++|||||||++.||.| ||........+|-.+.--...|.++...+.+ ..||++|+.+||.+||+|.
T Consensus 748 IDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~ 827 (1226)
T KOG4279|consen 748 IDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAK 827 (1226)
T ss_pred hccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHH
Confidence 98776 9999999999999999999 6655544555555554333333444444444 4999999999999999999
Q ss_pred HHHcCcccCCC
Q 004998 357 ELLQSEFLNEP 367 (720)
Q Consensus 357 eiL~hp~~~~~ 367 (720)
++|+.||++..
T Consensus 828 ~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 828 DLLQDPFLQHN 838 (1226)
T ss_pred HhccCcccccC
Confidence 99999999876
|
|
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.1e-32 Score=293.14 Aligned_cols=209 Identities=20% Similarity=0.229 Sum_probs=177.7
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
-|...|+.+|..|+|||||++|+.|..... ..+.+|.|+ ..|+|++|+++.++ ++...++.|++||+.||.|||++
T Consensus 86 eR~~~Ev~lLKsL~H~NIirfy~SW~d~~n--~~in~iTEL~TSGtLr~Y~kk~~~-vn~kaik~W~RQILkGL~yLHs~ 162 (632)
T KOG0584|consen 86 ERLYSEVHLLKSLKHPNIIRFYDSWVDTDN--KTINFITELFTSGTLREYRKKHRR-VNIKAIKSWCRQILKGLVYLHSQ 162 (632)
T ss_pred HHHHHHHHHHccCCCCceeeeeeheecCCC--ceeeeeeecccCCcHHHHHHHhcc-CCHHHHHHHHHHHHHHhhhhhcC
Confidence 367788899999999999999995554443 467899999 99999999976655 99999999999999999999997
Q ss_pred --CceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 141 --GIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 141 --gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
.|||||||.+||+|+ ..|.|||.|+|+| ....
T Consensus 163 ~PPIIHRDLKCDNIFinG~~G~VKIGDLGLA---------------------------------------------tl~r 197 (632)
T KOG0584|consen 163 DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLA---------------------------------------------TLLR 197 (632)
T ss_pred CCCccccccccceEEEcCCcCceeecchhHH---------------------------------------------HHhh
Confidence 699999999999998 5688999666655 2211
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
.. .....+|||.|||||++. ..|...+|||||
T Consensus 198 ~s-----------------------------------------------~aksvIGTPEFMAPEmYE-E~YnE~VDVYaF 229 (632)
T KOG0584|consen 198 KS-----------------------------------------------HAKSVIGTPEFMAPEMYE-ENYNELVDVYAF 229 (632)
T ss_pred cc-----------------------------------------------ccceeccCccccChHHHh-hhcchhhhhhhh
Confidence 10 011258999999999997 449999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+.+.||+| ||........+++.+..++.|..+.. ..|...+||.+||.. .+.|||+.|+|.||||...
T Consensus 230 GMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 230 GMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred hHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 999999999 89888888999999999999887755 456677999999999 9999999999999999986
|
|
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.2e-31 Score=277.31 Aligned_cols=207 Identities=16% Similarity=0.195 Sum_probs=159.2
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.+++||||+++++ .++.+. .+|++||| .|++|.+++.. ....+++..+..++.||+.||.|||+.||+
T Consensus 42 ~E~~il~~l~hp~i~~~~~-~~~~~~---~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iv 117 (277)
T cd05607 42 LEKEILEKVNSPFIVNLAY-AFESKT---HLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIV 117 (277)
T ss_pred HHHHHHHhcCCCcEEEEEE-EEecCC---eEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 4677999999999999998 555443 68999999 89999998843 334589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+.......
T Consensus 118 H~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~------------------------------------------------ 149 (277)
T cd05607 118 YRDMKPENVLLDDQGNCRLSDLGLAVELKDGK------------------------------------------------ 149 (277)
T ss_pred EccCChHhEEEcCCCCEEEeeceeeeecCCCc------------------------------------------------
Confidence 99999999999999999999998773221100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 150 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~e 186 (277)
T cd05607 150 -------------------------------------------TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYE 186 (277)
T ss_pred -------------------------------------------eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHH
Confidence 0001357899999999998889999999999999999
Q ss_pred ccc---cCCCCchH---HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh----HHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEK---TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~---~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta----~eiL~hp~~~~~ 367 (720)
|++ ||...... ............+.......+...+|+.+||.+||.+||++ .+++.||||...
T Consensus 187 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~ 260 (277)
T cd05607 187 MVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTI 260 (277)
T ss_pred HHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence 999 66543221 12222222222221112233455699999999999999999 677899999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-31 Score=284.66 Aligned_cols=201 Identities=15% Similarity=0.197 Sum_probs=157.7
Q ss_pred hhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceecc
Q 004998 68 GVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHN 146 (720)
Q Consensus 68 ~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrD 146 (720)
..++..++||||+++++ ++.... .+|+|||| .|++|..++... .+++..++.++.||+.||.|||++||+|||
T Consensus 53 ~~~~~~l~hp~i~~~~~-~~~~~~---~~~lv~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrd 126 (324)
T cd05589 53 FETANSERHPFLVNLFA-CFQTED---HVCFVMEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYLHENKIVYRD 126 (324)
T ss_pred HHhccccCCCChhceee-EEEcCC---EEEEEEcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecC
Confidence 34567889999999999 555543 68999999 999999988542 499999999999999999999999999999
Q ss_pred CCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccc
Q 004998 147 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 226 (720)
Q Consensus 147 LKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~ 226 (720)
|||+|||++.++.+||+|||++.......
T Consensus 127 lkp~Nill~~~~~~kL~Dfg~~~~~~~~~--------------------------------------------------- 155 (324)
T cd05589 127 LKLDNLLLDTEGFVKIADFGLCKEGMGFG--------------------------------------------------- 155 (324)
T ss_pred CCHHHeEECCCCcEEeCcccCCccCCCCC---------------------------------------------------
Confidence 99999999999999999998873210000
Q ss_pred cCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc
Q 004998 227 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 227 q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt 306 (720)
......+||+.|+|||.+.+..++.++|||||||++|||++
T Consensus 156 ---------------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~ 196 (324)
T cd05589 156 ---------------------------------------DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLV 196 (324)
T ss_pred ---------------------------------------CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHh
Confidence 00011468999999999998889999999999999999999
Q ss_pred ---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 307 ---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 307 ---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
||...... .....+..... .++.. .+...+||.+||+.||.+|| ++.++++||||...
T Consensus 197 G~~pf~~~~~~-~~~~~i~~~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~ 263 (324)
T cd05589 197 GESPFPGDDEE-EVFDSIVNDEV--RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI 263 (324)
T ss_pred CCCCCCCCCHH-HHHHHHHhCCC--CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence 66655443 23333332211 11122 34456999999999999999 69999999999875
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.1e-31 Score=293.39 Aligned_cols=210 Identities=14% Similarity=0.168 Sum_probs=158.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..+|.+++|||||++++ ++.... .+|++||+.+++|.+++.. ...+++.+++.|+.||+.||.|||++||||
T Consensus 134 ~~E~~il~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~-~~~l~~~~~~~i~~ql~~aL~~LH~~givH 208 (392)
T PHA03207 134 GREIDILKTISHRAIINLIH-AYRWKS---TVCMVMPKYKCDLFTYVDR-SGPLPLEQAITIQRRLLEALAYLHGRGIIH 208 (392)
T ss_pred HHHHHHHHhcCCCCccceee-eEeeCC---EEEEEehhcCCCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 36888999999999999999 554433 6799999977899999943 345999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.++|+|||++.........
T Consensus 209 rDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~----------------------------------------------- 241 (392)
T PHA03207 209 RDVKTENIFLDEPENAVLGDFGAACKLDAHPDT----------------------------------------------- 241 (392)
T ss_pred cCCCHHHEEEcCCCCEEEccCccccccCccccc-----------------------------------------------
Confidence 999999999999999999999987432111000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.......||+.|+|||++.+..++.++|||||||++|||
T Consensus 242 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el 280 (392)
T PHA03207 242 -----------------------------------------PQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEM 280 (392)
T ss_pred -----------------------------------------ccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHH
Confidence 000114689999999999988899999999999999999
Q ss_pred cc---cCCCCch---H---HHHHHHhhc----------------------CCCCcccc------cc-CchHHHHHHHcCC
Q 004998 305 FC---PFSTGEE---K---TRTMSSLRH----------------------RVLPPQLL------LK-FPKEASFCLWLLH 346 (720)
Q Consensus 305 lt---pf~~~~~---~---~~~~~~l~~----------------------~~~p~~~~------~~-~p~~~~li~~~L~ 346 (720)
++ ||.+... . ......+.. ...++... .. .....+||.+||+
T Consensus 281 ~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~ 360 (392)
T PHA03207 281 SVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLT 360 (392)
T ss_pred HHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhc
Confidence 98 6654321 0 011111100 00000000 01 1234489999999
Q ss_pred CCCCCCCChHHHHcCcccCCC
Q 004998 347 PEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+||.+|||+.|+|.||||...
T Consensus 361 ~dp~~Rpsa~e~l~~p~f~~~ 381 (392)
T PHA03207 361 FDQEFRPSAQDILSLPLFTKE 381 (392)
T ss_pred cChhhCCCHHHHhhCchhhcc
Confidence 999999999999999999865
|
|
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-31 Score=273.36 Aligned_cols=208 Identities=18% Similarity=0.200 Sum_probs=161.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.++|..++.+++||||+++++ +++... .++++||| .|++|.+++.... .+++..++.++.||+.||.|||+.||
T Consensus 51 ~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~i 125 (263)
T cd06625 51 LECEIQLLKNLQHERIVQYYG-CLRDDE---TLSIFMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYLHSNMI 125 (263)
T ss_pred HHHHHHHHHhCCCCCeeeeEE-EEccCC---eEEEEEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 346777999999999999999 554443 68999999 8999999995543 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+......... ..
T Consensus 126 ~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~-------------------------------~~------------ 162 (263)
T cd06625 126 VHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS-------------------------------GT------------ 162 (263)
T ss_pred ecCCCCHHHEEEcCCCCEEEeecccceeccccccc-------------------------------cc------------
Confidence 99999999999999999999999887432110000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|+..|+|||++.+..++.++|||||||++|
T Consensus 163 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 198 (263)
T cd06625 163 --------------------------------------------GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVV 198 (263)
T ss_pred --------------------------------------------cccCCCcCccccCcceeccCCCCchhhhHHHHHHHH
Confidence 000135788999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
||++ ||............. .....+.+.... +...+|+.+||..+|.+|||+.++++||||
T Consensus 199 el~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 199 EMLTEKPPWAEFEAMAAIFKIA-TQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred HHHhCCCCccccchHHHHHHHh-ccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 9999 565544433333322 222223333333 445599999999999999999999999997
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-31 Score=277.94 Aligned_cols=207 Identities=17% Similarity=0.227 Sum_probs=156.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++++++||||+++++ ++.+.. .+|+++||.+++|.+++......+++..++.++.||+.||.|||++||+
T Consensus 46 ~~~ei~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~ 121 (284)
T cd07839 46 ALREICLLKELKHKNIVRLYD-VLHSDK---KLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVL 121 (284)
T ss_pred hhHHHHHHHhcCCCCeeeHHH-HhccCC---ceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 346778999999999999999 444433 6799999977799999865555699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+...+.... .
T Consensus 122 H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--------------------------------~-------------- 155 (284)
T cd07839 122 HRDLKPQNLLINKNGELKLADFGLARAFGIPVR--------------------------------C-------------- 155 (284)
T ss_pred cCCCCHHHEEEcCCCcEEECccchhhccCCCCC--------------------------------C--------------
Confidence 999999999999999999999988743321100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~ 302 (720)
.....+++.|+|||.+.+.. ++.++|||||||++|
T Consensus 156 --------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~ 191 (284)
T cd07839 156 --------------------------------------------YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFA 191 (284)
T ss_pred --------------------------------------------cCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHH
Confidence 00135688999999987755 799999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc-------------------CCCCc---------cccccCchHHHHHHHcCCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH-------------------RVLPP---------QLLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~-------------------~~~p~---------~~~~~~p~~~~li~~~L~~dP~~ 351 (720)
||++ ||............+.. ...+. ......+...+|+.+||+.||.+
T Consensus 192 ~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 271 (284)
T cd07839 192 ELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQ 271 (284)
T ss_pred HHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhh
Confidence 9998 54333222222211110 00000 00112234459999999999999
Q ss_pred CCChHHHHcCccc
Q 004998 352 RPKMGELLQSEFL 364 (720)
Q Consensus 352 Rpta~eiL~hp~~ 364 (720)
|||+++++.||||
T Consensus 272 R~t~~~il~h~~f 284 (284)
T cd07839 272 RISAEEALQHPYF 284 (284)
T ss_pred cCCHHHHhcCCCC
Confidence 9999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-31 Score=281.37 Aligned_cols=210 Identities=14% Similarity=0.197 Sum_probs=158.9
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++.+++||||+++++ ++..+. .+|+||||.+++|.+++...+..+++..++.++.||+.||.|||++||+
T Consensus 51 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~iv 126 (309)
T cd07872 51 AIREVSLLKDLKHANIVTLHD-IVHTDK---SLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVL 126 (309)
T ss_pred HHHHHHHHHhCCCCCcceEEE-EEeeCC---eEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 336788999999999999999 554443 5799999966799999966555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++........
T Consensus 127 H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 159 (309)
T cd07872 127 HRDLKPQNLLINERGELKLADFGLARAKSVPTK----------------------------------------------- 159 (309)
T ss_pred cCCCCHHHEEECCCCCEEECccccceecCCCcc-----------------------------------------------
Confidence 999999999999999999999988733211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
......+|+.|+|||++.+. .++.++|||||||++|
T Consensus 160 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~ 196 (309)
T cd07872 160 -------------------------------------------TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFF 196 (309)
T ss_pred -------------------------------------------ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHH
Confidence 00013568999999998764 4899999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc--C------------------CCCcc--------ccccCchHHHHHHHcCCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH--R------------------VLPPQ--------LLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~--~------------------~~p~~--------~~~~~p~~~~li~~~L~~dP~~ 351 (720)
||++ ||............+.. . ..+.. .....+...+|+.+||+.||.+
T Consensus 197 el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~ 276 (309)
T cd07872 197 EMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKK 276 (309)
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhh
Confidence 9999 56554332211111110 0 00100 0111234459999999999999
Q ss_pred CCChHHHHcCcccCCC
Q 004998 352 RPKMGELLQSEFLNEP 367 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~ 367 (720)
|||+.|+|+||||+..
T Consensus 277 R~t~~e~l~h~~~~~~ 292 (309)
T cd07872 277 RISAEEAMKHAYFRSL 292 (309)
T ss_pred CCCHHHHhcChhhhhc
Confidence 9999999999999876
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=286.56 Aligned_cols=207 Identities=18% Similarity=0.202 Sum_probs=158.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ- 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~- 140 (720)
+..+|..+|.+++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++..+..++.||+.||.|||+.
T Consensus 49 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~ 123 (333)
T cd06650 49 QIIRELQVLHECNSPYIVGFYG-AFYSDG---EISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH 123 (333)
T ss_pred HHHHHHHHHHHCCCCcccceeE-EEEECC---EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 3447888999999999999999 554443 68999999 8999999996543 489999999999999999999985
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
+|+||||||+|||++.++.+||+|||++......
T Consensus 124 ~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~---------------------------------------------- 157 (333)
T cd06650 124 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------------------------------- 157 (333)
T ss_pred CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh----------------------------------------------
Confidence 7999999999999999999999999877321000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 158 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~i 191 (333)
T cd06650 158 ----------------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 191 (333)
T ss_pred ----------------------------------------------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHH
Confidence 0001367899999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHH--H-----------------------------------------HHhhcCCCCcccc-c-
Q 004998 301 LFELFC---PFSTGEEKTRT--M-----------------------------------------SSLRHRVLPPQLL-L- 332 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~--~-----------------------------------------~~l~~~~~p~~~~-~- 332 (720)
+|||++ ||......... + ..+... .++.+. .
T Consensus 192 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 270 (333)
T cd06650 192 LVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNE-PPPKLPSGV 270 (333)
T ss_pred HHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcC-CCccCCCCC
Confidence 999998 56543221100 0 000000 111111 1
Q ss_pred cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 333 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 333 ~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
..+...+|+.+||++||++|||+.|++.||||+..
T Consensus 271 ~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 271 FGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred cCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 12334599999999999999999999999999865
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-31 Score=285.15 Aligned_cols=205 Identities=17% Similarity=0.230 Sum_probs=158.0
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++..+ .||+|+++++ ++.... .+|+|||| .+++|.+++.... .+++.+++.++.||+.||.|||++||+
T Consensus 49 ~e~~~l~~~~~~~~i~~~~~-~~~~~~---~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~iv 123 (323)
T cd05616 49 VEKRVLALSGKPPFLTQLHS-CFQTMD---RLYFVMEYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFLHSKGII 123 (323)
T ss_pred HHHHHHHhccCCCeEeeEEE-EEecCC---EEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 444555554 5889999988 555543 57999999 8999999995543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++....... .
T Consensus 124 HrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~----------------------------------~------------- 156 (323)
T cd05616 124 YRDLKLDNVMLDSEGHIKIADFGMCKENMWDG----------------------------------V------------- 156 (323)
T ss_pred ecCCCHHHeEECCCCcEEEccCCCceecCCCC----------------------------------C-------------
Confidence 99999999999999999999998873211100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 157 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e 193 (323)
T cd05616 157 -------------------------------------------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 193 (323)
T ss_pred -------------------------------------------ccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHH
Confidence 0011468999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+...... ......++..+|+.+||+.+|.+|+++ .++++||||...
T Consensus 194 lltg~~Pf~~~~~~-~~~~~i~~~~~~-~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~ 263 (323)
T cd05616 194 MLAGQAPFEGEDED-ELFQSIMEHNVA-YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 263 (323)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhCCCC-CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence 999 67655443 333333332211 111233455699999999999999974 899999999875
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-32 Score=313.47 Aligned_cols=237 Identities=19% Similarity=0.204 Sum_probs=184.2
Q ss_pred CCCCCccccccccccCCCCccceee-eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCC
Q 004998 40 RNPRLLRGERFGVRGDDSNDFELRK-HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRS 117 (720)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~r~-~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~ 117 (720)
.+....+.+-|.+-... ...+.. .+|-.+|..++|||+|++||+- .+...++|.||| .||+|.+.+ ..++.
T Consensus 1258 ~tGellAvKEI~iq~~~--~k~~~~i~eEm~vlE~lnHpNlV~YyGVE----vHRekv~IFMEyC~~GsLa~ll-~~gri 1330 (1509)
T KOG4645|consen 1258 DTGELLAVKEIKIQDSD--HKTFKLIAEEMKVLEGLNHPNLVRYYGVE----VHREKVYIFMEYCEGGSLASLL-EHGRI 1330 (1509)
T ss_pred CccchhhhhhhhcCccc--cccCcchHHHHHHHHhccCccccccCcee----ecHHHHHHHHHHhccCcHHHHH-Hhcch
Confidence 34444444444332222 444433 3788899999999999999932 223357999999 999999988 44555
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchh
Q 004998 118 VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLD 197 (720)
Q Consensus 118 l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (720)
.++...+.+..|++.||.|||++|||||||||+||+|+.+|-+|+.|||.|...-..
T Consensus 1331 ~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~----------------------- 1387 (1509)
T KOG4645|consen 1331 EDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN----------------------- 1387 (1509)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCc-----------------------
Confidence 888899999999999999999999999999999999999999999999988432111
Q ss_pred hHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcc
Q 004998 198 MLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWY 277 (720)
Q Consensus 198 ~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y 277 (720)
.+++|..-...+||+.|
T Consensus 1388 ---------------------------------------------------------------~~~~~~el~~~~GT~~Y 1404 (1509)
T KOG4645|consen 1388 ---------------------------------------------------------------AQTMPGELQSMMGTPMY 1404 (1509)
T ss_pred ---------------------------------------------------------------hhcCCHHHHhhcCCchh
Confidence 01111111236899999
Q ss_pred cCCccccCCC---CCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCC
Q 004998 278 ASPEELAGAP---VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 278 ~APE~l~~~~---~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~ 351 (720)
||||++.+.. ..-++|||||||++.||+| ||...+...++|..+..+..|+......+...+||..||..||+.
T Consensus 1405 MAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~ 1484 (1509)
T KOG4645|consen 1405 MAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKM 1484 (1509)
T ss_pred cCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchh
Confidence 9999997754 5779999999999999999 777777777888888877777766665566669999999999999
Q ss_pred CCChHHHHcCcccCCCcc
Q 004998 352 RPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~~~ 369 (720)
|.++.|||+|-|-+...+
T Consensus 1485 Rw~~~qlle~~f~~~~~d 1502 (1509)
T KOG4645|consen 1485 RWTASQLLEHAFGKSCTD 1502 (1509)
T ss_pred hhHHHHHHHhhccccccc
Confidence 999999999999776543
|
|
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.3e-31 Score=283.39 Aligned_cols=202 Identities=19% Similarity=0.219 Sum_probs=158.1
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccC
Q 004998 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.++..++||||+++++ .+.... .+|++||| .|++|..++.+. ..+++..++.++.||+.||+|||++||+||||
T Consensus 48 ~~l~~~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~givH~Dl 122 (325)
T cd05604 48 VLLKNVKHPFLVGLHY-SFQTTE---KLYFVLDFVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSINIVYRDL 122 (325)
T ss_pred HHHHhCCCCCCccEEE-EEecCC---EEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCC
Confidence 3577899999999998 554443 57999999 899999998544 35999999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccccc
Q 004998 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+|||++.++.+||+|||++...... .+
T Consensus 123 kp~NIll~~~~~~kL~DfG~~~~~~~~---------------------------------~~------------------ 151 (325)
T cd05604 123 KPENILLDSQGHVVLTDFGLCKEGIAQ---------------------------------SD------------------ 151 (325)
T ss_pred CHHHeEECCCCCEEEeecCCcccCCCC---------------------------------CC------------------
Confidence 999999999999999999987321000 00
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc-
Q 004998 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 152 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G 192 (325)
T cd05604 152 ---------------------------------------TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYG 192 (325)
T ss_pred ---------------------------------------CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcC
Confidence 0011468999999999999889999999999999999999
Q ss_pred --cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh----HHHHcCcccCCC
Q 004998 307 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 367 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta----~eiL~hp~~~~~ 367 (720)
||...... .....+....+. ......+...+++.+||+.+|.+||++ .+++.||||...
T Consensus 193 ~~pf~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~ 257 (325)
T cd05604 193 LPPFYCRDVA-EMYDNILHKPLV-LRPGASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL 257 (325)
T ss_pred CCCCCCCCHH-HHHHHHHcCCcc-CCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence 66654433 333333332211 111233445599999999999999976 589999999875
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-31 Score=285.31 Aligned_cols=208 Identities=17% Similarity=0.242 Sum_probs=157.8
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++..++||||+++++ +++.+. .+|+|||| .|++|.+++.+....+++..++.++.||+.||+|||++||+|
T Consensus 50 ~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 125 (331)
T cd05597 50 EERDVLVNGDRRWITNLHY-AFQDEN---NLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVH 125 (331)
T ss_pred HHHHHHHhCCCCCCCceEE-EEecCC---eEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEE
Confidence 4666788899999999999 555543 68999999 899999999665556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++........
T Consensus 126 ~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 157 (331)
T cd05597 126 RDIKPDNVLLDKNGHIRLADFGSCLRLLADGT------------------------------------------------ 157 (331)
T ss_pred CCCCHHHEEECCCCCEEEEECCceeecCCCCC------------------------------------------------
Confidence 99999999999999999999998733211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----CCCCccccchhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDIwSLGv 299 (720)
......+||+.|+|||++.+ ..++.++|||||||
T Consensus 158 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~ 196 (331)
T cd05597 158 -----------------------------------------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGV 196 (331)
T ss_pred -----------------------------------------ccccceeccccccCHHHHhhccccccCCCCcceeehhhh
Confidence 00011368999999999963 34788999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc----CCCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRH----RVLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~----~~~p~~~~~~~p~~~~li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||....... .+..+.. ..+++......+...+|+.+||..++.. |+++.++++||||...
T Consensus 197 ~l~el~~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~ 272 (331)
T cd05597 197 CMYEMLYGETPFYAESLVE-TYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI 272 (331)
T ss_pred HHHHHhhCCCCCCCCCHHH-HHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence 9999999 665543332 2222222 1223322223344559999988664443 7899999999999875
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-31 Score=278.72 Aligned_cols=206 Identities=16% Similarity=0.216 Sum_probs=160.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++.+++||||+++++ .+..+. .+|++||| .+++|.+++.. ....+++..+..++.||+.||.|||+.||
T Consensus 48 ~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 123 (285)
T cd05605 48 LNEKQILEKVNSRFVVSLAY-AYETKD---ALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERI 123 (285)
T ss_pred HHHHHHHHhcCCCCEeeeee-eecCCC---eEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 36778999999999999999 454443 68999999 89999998843 33458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.......
T Consensus 124 vH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~----------------------------------------------- 156 (285)
T cd05605 124 VYRDLKPENILLDDYGHIRISDLGLAVEIPEGE----------------------------------------------- 156 (285)
T ss_pred EecCCCHHHEEECCCCCEEEeeCCCceecCCCC-----------------------------------------------
Confidence 999999999999999999999988763210000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||++.+..++.++||||+||++|
T Consensus 157 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~ 192 (285)
T cd05605 157 --------------------------------------------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIY 192 (285)
T ss_pred --------------------------------------------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHH
Confidence 000136799999999999888999999999999999
Q ss_pred hccc---cCCCCchHH---HHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKT---RTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~---~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
||++ ||....... .....+... ++.+.... +...+|+.+||+.||.+|| +++++++||||...
T Consensus 193 el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05605 193 EMIEGKSPFRQRKEKVKREEVERRVKED--QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA 267 (285)
T ss_pred HHHHCCCCCCCCchhhHHHHHHHHhhhc--ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence 9998 666543221 122222211 12222223 3445999999999999999 89999999999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.5e-31 Score=284.34 Aligned_cols=205 Identities=17% Similarity=0.237 Sum_probs=158.6
Q ss_pred eehhhhcccCCCCC-ceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLR-NQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~Hpn-IV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..|..++..+.|++ |+++++ ++.... .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++||
T Consensus 48 ~~e~~~l~~~~~~~~i~~~~~-~~~~~~---~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~i 122 (324)
T cd05587 48 MVEKRVLALPGKPPFLTQLHS-CFQTMD---RLYFVMEYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLHSKGI 122 (324)
T ss_pred HHHHHHHHhcCCCCceeeeEE-EEEcCC---EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 35666788887765 777777 554443 58999999 8999999995544 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||++.......
T Consensus 123 vH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~----------------------------------------------- 155 (324)
T cd05587 123 IYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG----------------------------------------------- 155 (324)
T ss_pred EecCCCHHHeEEcCCCCEEEeecCcceecCCCC-----------------------------------------------
Confidence 999999999999999999999999873210000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.......||+.|+|||++.+..++.++|||||||++|
T Consensus 156 -------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ 192 (324)
T cd05587 156 -------------------------------------------KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLY 192 (324)
T ss_pred -------------------------------------------CceeeecCCccccChhhhcCCCCCcccchhhhHHHHH
Confidence 0001146899999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
||++ ||...... .....+..... .++.. .+...+|+.+||++||.+|+++ .++++||||...
T Consensus 193 elltG~~pf~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~ 263 (324)
T cd05587 193 EMLAGQPPFDGEDED-ELFQSIMEHNV--SYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI 263 (324)
T ss_pred HHHhCCCCCCCCCHH-HHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 9999 67655443 33333333221 12222 3445599999999999999976 899999999875
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=285.58 Aligned_cols=206 Identities=16% Similarity=0.249 Sum_probs=158.2
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.++ +||||+++++ ++.... .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++||+
T Consensus 44 ~e~~~~~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH~~~iv 118 (327)
T cd05617 44 TEKHVFEQASSNPFLVGLHS-CFQTTS---RLFLVIEYVNGGDLMFHMQRQR-KLPEEHARFYAAEICIALNFLHERGII 118 (327)
T ss_pred HHHHHHHhhcCCCCEeeEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 555566666 6999999999 555543 68999999 8999999885443 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++....... +
T Consensus 119 HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---------------------------------~-------------- 151 (327)
T cd05617 119 YRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG---------------------------------D-------------- 151 (327)
T ss_pred ccCCCHHHEEEeCCCCEEEeccccceeccCCC---------------------------------C--------------
Confidence 99999999999999999999998873210000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....+||+.|+|||++.+..++.++|||||||++||
T Consensus 152 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~e 188 (327)
T cd05617 152 -------------------------------------------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFE 188 (327)
T ss_pred -------------------------------------------ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHH
Confidence 0011468999999999999889999999999999999
Q ss_pred ccc---cCCCC------chHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC------hHHHHcCcccCCC
Q 004998 304 LFC---PFSTG------EEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK------MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~------~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpt------a~eiL~hp~~~~~ 367 (720)
|++ ||... .........+.... ..++... +...+++.+||.+||.+|++ +.++++||||...
T Consensus 189 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 189 MMAGRSPFDIITDNPDMNTEDYLFQVILEKP--IRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred HHhCCCCCCccCCCcccccHHHHHHHHHhCC--CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence 999 66421 11122233332221 1122223 44559999999999999997 4699999999986
Q ss_pred c
Q 004998 368 R 368 (720)
Q Consensus 368 ~ 368 (720)
.
T Consensus 267 ~ 267 (327)
T cd05617 267 D 267 (327)
T ss_pred C
Confidence 3
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.8e-31 Score=298.55 Aligned_cols=220 Identities=15% Similarity=0.181 Sum_probs=148.2
Q ss_pred hhhhcccCC------CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-
Q 004998 67 DGVELTHGD------HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS- 139 (720)
Q Consensus 67 e~~~Ls~l~------HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs- 139 (720)
|..++..+. |++|+.+++ ++..+. .++|+|||+.|++|.+++.+.+ .+++..++.|+.||+.||+|||+
T Consensus 175 e~~~l~~l~~~~~~~~~~i~~i~~-~~~~~~--~~~~iv~~~~g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH~~ 250 (467)
T PTZ00284 175 EIQFMEKVRQADPADRFPLMKIQR-YFQNET--GHMCIVMPKYGPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFHTE 250 (467)
T ss_pred HHHHHHHHhhcCcccCcceeeeEE-EEEcCC--ceEEEEEeccCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhc
Confidence 444554444 455888888 444332 3689999998999999995543 59999999999999999999998
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
.|||||||||+|||++.++... ++...... ......++++|||.+.....
T Consensus 251 ~gIiHrDlKP~NILl~~~~~~~--~~~~~~~~---------------------------~~~~~~vkl~DfG~~~~~~~- 300 (467)
T PTZ00284 251 LHLMHTDLKPENILMETSDTVV--DPVTNRAL---------------------------PPDPCRVRICDLGGCCDERH- 300 (467)
T ss_pred CCeecCCCCHHHEEEecCCccc--cccccccc---------------------------CCCCceEEECCCCccccCcc-
Confidence 5999999999999998765311 11100000 00001234455554321000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+..|+.++|||||||
T Consensus 301 -----------------------------------------------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGv 333 (467)
T PTZ00284 301 -----------------------------------------------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGC 333 (467)
T ss_pred -----------------------------------------------ccccccCCccccCcHHhhcCCCCcHHHHHHHHH
Confidence 001257899999999999999999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc--CCCCcccc---------------------------------------ccCc
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQLL---------------------------------------LKFP 335 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~---------------------------------------~~~p 335 (720)
++|||++ ||......... ..+.. +.+|..+. ...+
T Consensus 334 il~elltG~~pf~~~~~~~~~-~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (467)
T PTZ00284 334 IIYELYTGKLLYDTHDNLEHL-HLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDD 412 (467)
T ss_pred HHHHHHhCCCCCCCCChHHHH-HHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchH
Confidence 9999999 66554332111 11100 11111100 0112
Q ss_pred hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 336 ~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
...+||.+||++||.+|||++|+|+||||....
T Consensus 413 ~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~ 445 (467)
T PTZ00284 413 LLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYY 445 (467)
T ss_pred HHHHHHHHhCCcChhhCCCHHHHhcCccccccC
Confidence 345999999999999999999999999998753
|
|
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.4e-31 Score=294.99 Aligned_cols=209 Identities=15% Similarity=0.172 Sum_probs=157.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
+|..+|++++|||||++++ ++..+. ..+++||+..++|.+++......+++..++.|+.||+.||.|||++|||||
T Consensus 209 ~E~~iL~~L~HpnIv~l~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHr 284 (461)
T PHA03211 209 HEARLLRRLSHPAVLALLD-VRVVGG---LTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHR 284 (461)
T ss_pred HHHHHHHHCCCCCCCcEEE-EEEECC---EEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEC
Confidence 6888999999999999999 444432 578999997789999996655569999999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+||||+.++.++|+|||+++....... ..
T Consensus 285 DLKP~NILl~~~~~vkL~DFGla~~~~~~~~-------------------------------~~---------------- 317 (461)
T PHA03211 285 DIKTENVLVNGPEDICLGDFGAACFARGSWS-------------------------------TP---------------- 317 (461)
T ss_pred cCCHHHEEECCCCCEEEcccCCceecccccc-------------------------------cc----------------
Confidence 9999999999999999999988743210000 00
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhcc
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 305 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLl 305 (720)
......||+.|+|||++.+..++.++|||||||+||||+
T Consensus 318 -----------------------------------------~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~ 356 (461)
T PHA03211 318 -----------------------------------------FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAA 356 (461)
T ss_pred -----------------------------------------cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHH
Confidence 000146899999999999988999999999999999998
Q ss_pred c---cCCCCc-------hHHHHHHHhhcCC-----CCcc---------------------c-------cccCchHHHHHH
Q 004998 306 C---PFSTGE-------EKTRTMSSLRHRV-----LPPQ---------------------L-------LLKFPKEASFCL 342 (720)
Q Consensus 306 t---pf~~~~-------~~~~~~~~l~~~~-----~p~~---------------------~-------~~~~p~~~~li~ 342 (720)
+ ++.... ........+.... +++. . ....+...+||.
T Consensus 357 ~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~ 436 (461)
T PHA03211 357 VHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVC 436 (461)
T ss_pred HcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHH
Confidence 6 222110 0111222222111 1110 0 011124558999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCC
Q 004998 343 WLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
+||..||.+|||+.|+|+||||+.
T Consensus 437 ~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 437 RALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred HHcccChhhCcCHHHHhhCcccCC
Confidence 999999999999999999999975
|
|
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=281.25 Aligned_cols=201 Identities=18% Similarity=0.233 Sum_probs=157.5
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccC
Q 004998 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.++..++||||+++++ ++.... .+|++||| .|++|.+++.... .+++..++.++.||+.||.|||++||+||||
T Consensus 48 ~~l~~~~h~~Iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~L~~lH~~giiHrDl 122 (325)
T cd05602 48 VLLKNVKHPFLVGLHF-SFQTAD---KLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSLNIVYRDL 122 (325)
T ss_pred HHHHhCCCCCCCceeE-EEEcCC---eEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCC
Confidence 3567899999999999 554443 57999999 8999999995543 4899999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccccc
Q 004998 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+|||++.++.++|+|||++....... .
T Consensus 123 kp~Nili~~~~~~kl~DfG~a~~~~~~~---------------------------------~------------------ 151 (325)
T cd05602 123 KPENILLDSQGHIVLTDFGLCKENIEHN---------------------------------G------------------ 151 (325)
T ss_pred CHHHeEECCCCCEEEccCCCCcccccCC---------------------------------C------------------
Confidence 9999999999999999998873210000 0
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc-
Q 004998 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
.....+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 152 ---------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g 192 (325)
T cd05602 152 ---------------------------------------TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 192 (325)
T ss_pred ---------------------------------------CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcC
Confidence 0011468999999999999889999999999999999999
Q ss_pred --cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChH----HHHcCcccCCC
Q 004998 307 --PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMG----ELLQSEFLNEP 367 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~----eiL~hp~~~~~ 367 (720)
||...... ..+..+..... .+.... +...+|+.+||+.||.+||++. ++++|+||...
T Consensus 193 ~~pf~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~ 257 (325)
T cd05602 193 LPPFYSRNTA-EMYDNILNKPL--QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI 257 (325)
T ss_pred CCCCCCCCHH-HHHHHHHhCCc--CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence 66654443 33334333221 122233 3445999999999999999876 89999999764
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-30 Score=280.04 Aligned_cols=202 Identities=18% Similarity=0.225 Sum_probs=157.5
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccC
Q 004998 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.++..++||||+++++ .+.+.. .+|+|||| .|++|..++.+. ..+++..+..++.||+.||.|||++||+||||
T Consensus 48 ~~l~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dl 122 (321)
T cd05603 48 VLLKNLKHPFLVGLHY-SFQTAE---KLYFVLDYVNGGELFFHLQRE-RCFLEPRARFYAAEVASAIGYLHSLNIIYRDL 122 (321)
T ss_pred HHHHhCCCCCccceee-EEEcCC---EEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccC
Confidence 3578899999999998 554443 57999999 899999988544 34899999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccccc
Q 004998 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+||+++.++.+||+|||++.......
T Consensus 123 kp~NIll~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------------- 150 (321)
T cd05603 123 KPENILLDSQGHVVLTDFGLCKEGVEPE---------------------------------------------------- 150 (321)
T ss_pred CHHHeEECCCCCEEEccCCCCccCCCCC----------------------------------------------------
Confidence 9999999999999999998873210000
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc-
Q 004998 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt- 306 (720)
......+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 151 --------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g 192 (321)
T cd05603 151 --------------------------------------ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYG 192 (321)
T ss_pred --------------------------------------CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcC
Confidence 00011468999999999998889999999999999999999
Q ss_pred --cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh----HHHHcCcccCCC
Q 004998 307 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 367 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta----~eiL~hp~~~~~ 367 (720)
||...+.. .....+...... ..........+++.+||+.||.+||++ .++++|+||...
T Consensus 193 ~~pf~~~~~~-~~~~~i~~~~~~-~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~ 257 (321)
T cd05603 193 LPPFYSRDVS-QMYDNILHKPLQ-LPGGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI 257 (321)
T ss_pred CCCCCCCCHH-HHHHHHhcCCCC-CCCCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence 66554433 333444333211 111233455699999999999999875 599999999865
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.1e-31 Score=286.80 Aligned_cols=206 Identities=21% Similarity=0.216 Sum_probs=155.6
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|..++||||+++++ ++.... .+|++||| .+++|.+.. ..++..+..++.||+.||.|||++||+
T Consensus 120 ~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~iv 190 (353)
T PLN00034 120 CREIEILRDVNHPNVVKCHD-MFDHNG---EIQVLLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRRHIV 190 (353)
T ss_pred HHHHHHHHhCCCCCcceeee-EeccCC---eEEEEEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 37888999999999999999 554443 57999999 888886532 257888899999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++....... +
T Consensus 191 HrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~---------------------------------~-------------- 223 (353)
T PLN00034 191 HRDIKPSNLLINSAKNVKIADFGVSRILAQTM---------------------------------D-------------- 223 (353)
T ss_pred ecCCCHHHEEEcCCCCEEEcccccceeccccc---------------------------------c--------------
Confidence 99999999999999999999998874321100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----CCCCccccchhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLG 298 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDIwSLG 298 (720)
.....+||..|+|||++.. ...+.++||||||
T Consensus 224 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslG 260 (353)
T PLN00034 224 -------------------------------------------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLG 260 (353)
T ss_pred -------------------------------------------cccccccCccccCccccccccccCcCCCcchhHHHHH
Confidence 0001368999999999843 2246799999999
Q ss_pred hhhhhccc---cCCCC--chHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 299 VLLFELFC---PFSTG--EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 299 vll~eLlt---pf~~~--~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|++|||++ ||... ......+..+.....+.......+...+||.+||+.||++|||+.|+|+||||.....
T Consensus 261 vil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~ 336 (353)
T PLN00034 261 VSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQP 336 (353)
T ss_pred HHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCCc
Confidence 99999999 66532 2222333333322222222233345569999999999999999999999999998743
|
|
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=268.08 Aligned_cols=216 Identities=18% Similarity=0.213 Sum_probs=162.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh----CCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD----KPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~----~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.||..++..+.|||||.|..++...+. .+++++||...+|.+.|+ ...+.++...++.|+.||++||.|||++
T Consensus 75 cREiaL~REl~h~nvi~Lv~Vfl~~d~---~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N 151 (438)
T KOG0666|consen 75 CREIALLRELKHPNVISLVKVFLSHDK---KVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN 151 (438)
T ss_pred HHHHHHHHHhcCCcchhHHHHHhccCc---eEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh
Confidence 378889999999999999995555332 589999998899999993 2335689999999999999999999999
Q ss_pred CceeccCCCCcEEEccC----CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 141 GIVVHNVRPSCFVMSSF----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~----~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
=|+||||||.|||+..+ |.|||.|||+++.+..+-.. |
T Consensus 152 WvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkp--------------------------------l------ 193 (438)
T KOG0666|consen 152 WVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKP--------------------------------L------ 193 (438)
T ss_pred heeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccc--------------------------------c------
Confidence 99999999999999977 88999888887665333100 0
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccch
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIY 295 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIw 295 (720)
. .....+-|.||+|||++.|.. ||++.|||
T Consensus 194 -------~------------------------------------------s~d~VVVTiWYRAPELLLGa~hYT~AiDvW 224 (438)
T KOG0666|consen 194 -------A------------------------------------------SLDPVVVTIWYRAPELLLGARHYTKAIDVW 224 (438)
T ss_pred -------c------------------------------------------cCCceEEEEEecChHHhcccccccchhhhH
Confidence 0 001256799999999999987 99999999
Q ss_pred hhhhhhhhccc--cC-CCCch------------HHHHHHHhhc------------------------CCCCcc-c-----
Q 004998 296 RLGVLLFELFC--PF-STGEE------------KTRTMSSLRH------------------------RVLPPQ-L----- 330 (720)
Q Consensus 296 SLGvll~eLlt--pf-~~~~~------------~~~~~~~l~~------------------------~~~p~~-~----- 330 (720)
++|||+.||++ |. .+.++ ..+++..+.. ....+. +
T Consensus 225 AiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~ 304 (438)
T KOG0666|consen 225 AIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYH 304 (438)
T ss_pred HHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHH
Confidence 99999999999 52 22111 1112222211 100110 0
Q ss_pred --cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 331 --LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 331 --~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
....|...+|+.+||.+||-+|.|++++|+|+||.+...+
T Consensus 305 ~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp 346 (438)
T KOG0666|consen 305 KHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP 346 (438)
T ss_pred HhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence 0022334599999999999999999999999999987443
|
|
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-30 Score=280.60 Aligned_cols=214 Identities=18% Similarity=0.157 Sum_probs=156.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..+++.++|||||++++ ++..+. .+|+|||| .+++|.+++... ...+++..++.++.||+.||+|||++||+
T Consensus 48 ~e~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ii 123 (327)
T cd08227 48 GELHVSKLFNHPNIVPYRA-TFIADN---ELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYV 123 (327)
T ss_pred HHHHHHHhcCCCCeeeEEE-EEEECC---EEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 5777899999999999999 554443 57999999 899999999542 34589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+++.||+.+... .++|.....
T Consensus 124 H~dlkp~Nil~~~~~~~~l~~~~~~~~~------------------------------------~~~~~~~~~------- 160 (327)
T cd08227 124 HRSVKASHILISVDGKVYLSGLRSNLSM------------------------------------INHGQRLRV------- 160 (327)
T ss_pred cCCCChhhEEEecCCcEEEcccchhhcc------------------------------------ccccccccc-------
Confidence 9999999999999999999988765221 111100000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC--CCCccccchhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVLL 301 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~sDIwSLGvll 301 (720)
..+ ++ ....++..|+|||++.+. .++.++|||||||++
T Consensus 161 -----------------------~~~--------------~~---~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il 200 (327)
T cd08227 161 -----------------------VHD--------------FP---KYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITA 200 (327)
T ss_pred -----------------------ccc--------------cc---ccccceecccChHHhhcccCCCCchhhHHHHHHHH
Confidence 000 00 012467789999999763 489999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCC---------c------------------------------------ccccc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLP---------P------------------------------------QLLLK 333 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p---------~------------------------------------~~~~~ 333 (720)
|||++ ||............+.. ..+ + .....
T Consensus 201 ~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (327)
T cd08227 201 CELANGHVPFKDMPATQMLLEKLNG-TVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTF 279 (327)
T ss_pred HHHHHCCCCCCCcchhHHHHHHhcC-CccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCccccccccc
Confidence 99999 66543322222222111 000 0 00001
Q ss_pred CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 334 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 334 ~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.+...+|+.+||++||++|||+.|+++||||+..
T Consensus 280 ~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~ 313 (327)
T cd08227 280 SPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 313 (327)
T ss_pred CHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhc
Confidence 2345599999999999999999999999999875
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-31 Score=309.20 Aligned_cols=226 Identities=16% Similarity=0.166 Sum_probs=157.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
...|+.+|.+++|||||++++.++.... ..+|+|||| .+++|.++|.. ....+++..++.|+.||+.||.|||+
T Consensus 59 ~~~EI~IL~~L~HPNIVrl~d~f~de~~--~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs 136 (1021)
T PTZ00266 59 LVIEVNVMRELKHKNIVRYIDRFLNKAN--QKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHN 136 (1021)
T ss_pred HHHHHHHHHHcCCCCcCeEEEEEEecCC--CEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3468889999999999999994443322 368999999 89999999943 23459999999999999999999998
Q ss_pred c-------CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccc
Q 004998 140 Q-------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 140 ~-------gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
. +||||||||+||||+.... .+.+..... .....+..++|+|||+
T Consensus 137 ~g~~~~~k~IVHRDLKPeNILL~s~~~-~lg~i~~~~---------------------------~n~ng~~iVKLsDFGl 188 (1021)
T PTZ00266 137 LKDGPNGERVLHRDLKPQNIFLSTGIR-HIGKITAQA---------------------------NNLNGRPIAKIGDFGL 188 (1021)
T ss_pred cccccccCCceeccCcHHHeEeecCcc-ccccccccc---------------------------cccCCCCceEEccCCc
Confidence 4 4999999999999975321 000000000 0000011234455555
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC--CCCc
Q 004998 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSC 290 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~ 290 (720)
+....... .....+||+.|+|||++.+. .++.
T Consensus 189 Ar~l~~~s----------------------------------------------~~~s~vGTp~YmAPEvL~ge~~~~s~ 222 (1021)
T PTZ00266 189 SKNIGIES----------------------------------------------MAHSCVGTPYYWSPELLLHETKSYDD 222 (1021)
T ss_pred cccccccc----------------------------------------------cccccCCCccccCHHHHhccCCCCCc
Confidence 44221100 00114689999999999653 4899
Q ss_pred cccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 291 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
++||||||||||||++ ||.........+..+..... ..+....+...+||..||.++|.+||++.|+|+||||..
T Consensus 223 KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~-lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~ 300 (1021)
T PTZ00266 223 KSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPD-LPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKN 300 (1021)
T ss_pred hhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCC-CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhh
Confidence 9999999999999999 77655554444444443321 112223455669999999999999999999999999963
|
|
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-30 Score=285.01 Aligned_cols=206 Identities=16% Similarity=0.209 Sum_probs=156.8
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++..++||||+++++ .+.++. .+|+|||| .|++|.+++... .+++..++.++.||+.||.|||++||+|
T Consensus 92 ~e~~i~~~~~hp~iv~~~~-~~~~~~---~~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH 165 (371)
T cd05622 92 EERDIMAFANSPWVVQLFY-AFQDDR---YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIH 165 (371)
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEcCC---EEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 5667888999999999999 554443 68999999 899999998543 3899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++++||+|||++........
T Consensus 166 rDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~------------------------------------------------ 197 (371)
T cd05622 166 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM------------------------------------------------ 197 (371)
T ss_pred CCCCHHHEEECCCCCEEEEeCCceeEcCcCCc------------------------------------------------
Confidence 99999999999999999999998743211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC----CCccccchhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVL 300 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~s~~sDIwSLGvl 300 (720)
......+||+.|+|||++.+.. ++.++|||||||+
T Consensus 198 -----------------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvi 236 (371)
T cd05622 198 -----------------------------------------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 236 (371)
T ss_pred -----------------------------------------ccccCcccCccccCHHHHhccCCCccCCCccceeehhHH
Confidence 0001146899999999997543 7899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCC--CC-ccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRV--LP-PQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~--~p-~~~~~~~p~~~~li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... .....+.... ++ +......+...+||.+||..+|.+ |+++.++++||||...
T Consensus 237 lyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 237 LYEMLVGDTPFYADSLV-GTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 310 (371)
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence 999999 67655443 3334443322 11 111123344459999999844433 7899999999999874
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-30 Score=271.01 Aligned_cols=209 Identities=14% Similarity=0.156 Sum_probs=160.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ .+.... ..|++||| .+++|..++.+...++++..++.++.||+.||.|||+.||+
T Consensus 50 ~~e~~~l~~l~h~~ii~~~~-~~~~~~---~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~ 125 (282)
T cd06643 50 MVEIDILASCDHPNIVKLLD-AFYYEN---NLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKII 125 (282)
T ss_pred HHHHHHHHHCCCCCeeeEEE-EEeeCC---EEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 35777899999999999999 444432 57999999 89999998865555699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++++|||++....... .
T Consensus 126 H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---------------------------------~-------------- 158 (282)
T cd06643 126 HRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---------------------------------Q-------------- 158 (282)
T ss_pred ecCCCcccEEEccCCCEEEccccccccccccc---------------------------------c--------------
Confidence 99999999999999999999998873221000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-----CCCCCccccchhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLG 298 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSLG 298 (720)
......|++.|+|||++. +..++.++||||||
T Consensus 159 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG 195 (282)
T cd06643 159 -------------------------------------------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLG 195 (282)
T ss_pred -------------------------------------------ccccccccccccCHhhccccCCCCCCCCccchhhhHH
Confidence 000135788999999984 33478899999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|||++ ||......................+..++ ...+||.+||+++|.+||++.++++||||...
T Consensus 196 vil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 196 ITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred HHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 99999998 66554443333332222111111222334 45599999999999999999999999999975
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=282.20 Aligned_cols=208 Identities=15% Similarity=0.221 Sum_probs=159.3
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++..++||||+++++ .+.+.. .+|+|||| .|++|.+++.+....+++..++.++.||+.||+|||++||+|
T Consensus 50 ~e~~~l~~~~~~~i~~l~~-~~~~~~---~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiH 125 (331)
T cd05624 50 EERNVLVNGDCQWITTLHY-AFQDEN---YLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVH 125 (331)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 4566788899999999999 555443 67999999 899999999664456999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++........
T Consensus 126 rDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~------------------------------------------------ 157 (331)
T cd05624 126 RDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT------------------------------------------------ 157 (331)
T ss_pred ccCchHHEEEcCCCCEEEEeccceeeccCCCc------------------------------------------------
Confidence 99999999999999999999998743211100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----CCCCccccchhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDIwSLGv 299 (720)
.......||+.|+|||++.+ ..++.++|||||||
T Consensus 158 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGv 196 (331)
T cd05624 158 -----------------------------------------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGV 196 (331)
T ss_pred -----------------------------------------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeeh
Confidence 00011368999999999876 45789999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcC----CCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~----~~p~~~~~~~p~~~~li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
+||||++ ||....... ....+... .+|+......+...+|+.+||..++.+ |++++++++||||...
T Consensus 197 il~ell~g~~Pf~~~~~~~-~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~ 272 (331)
T cd05624 197 CMYEMLYGETPFYAESLVE-TYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI 272 (331)
T ss_pred hhhhhhhCCCCccCCCHHH-HHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence 9999999 676544432 23333221 123333223345559999999876654 4689999999999874
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-30 Score=277.57 Aligned_cols=242 Identities=17% Similarity=0.188 Sum_probs=168.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..+|..++||||+++++ .+.... .+|++||| .|++|.+++.+ ....+++..++.++.||+.||.|||+.
T Consensus 47 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~ 122 (316)
T cd05574 47 RVLTEQEILATLDHPFLPTLYA-SFQTET---YLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL 122 (316)
T ss_pred HHHHHHHHHHhCCCCCchhhee-eeecCC---EEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC
Confidence 3446777999999999999999 444433 67999999 89999999954 345699999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+|+||||+||+++.++.++|+|||++........... . ....+...
T Consensus 123 ~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~---~-----------------------~~~~~~~~------ 170 (316)
T cd05574 123 GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVS---K-----------------------ALRKGSRR------ 170 (316)
T ss_pred CeeccCCChHHeEEcCCCCEEEeecchhhcccccccccc---c-----------------------cccccccc------
Confidence 999999999999999999999999999854322110000 0 00000000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
..... ...+.............+||..|+|||++.+..++.++|||||||+
T Consensus 171 -~~~~~----------------------------~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~l 221 (316)
T cd05574 171 -SSVNS----------------------------IPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGIL 221 (316)
T ss_pred -ccccc----------------------------cchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHH
Confidence 00000 0000000000001122578999999999998889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC----hHHHHcCcccCCCcc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK----MGELLQSEFLNEPRD 369 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt----a~eiL~hp~~~~~~~ 369 (720)
+|+|++ ||............+......+......+...+|+.+||+.||++||| ++|+|+||||+....
T Consensus 222 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~ 297 (316)
T cd05574 222 LYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNW 297 (316)
T ss_pred HHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCCh
Confidence 999999 665544433333223222222222112344559999999999999999 999999999998643
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-30 Score=279.24 Aligned_cols=208 Identities=17% Similarity=0.227 Sum_probs=158.7
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++..++||||+++++ ++.+.. .+|+|||| .+++|.+++.+....+++..++.++.||+.||.|||++||+|
T Consensus 50 ~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiH 125 (332)
T cd05623 50 EERDVLVNGDNQWITTLHY-AFQDEN---NLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVH 125 (332)
T ss_pred HHHHHHhhCCCCCEeeEEE-EEecCC---EEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 4566788899999999999 555543 67999999 899999999665556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.++|+|||++....... .
T Consensus 126 rDlkp~Nili~~~~~~kL~DfG~a~~~~~~~---------------------------------~--------------- 157 (332)
T cd05623 126 RDIKPDNILMDMNGHIRLADFGSCLKLMEDG---------------------------------T--------------- 157 (332)
T ss_pred cCCCHHHEEECCCCCEEEeecchheecccCC---------------------------------c---------------
Confidence 9999999999999999999998873221000 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----CCCCccccchhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDIwSLGv 299 (720)
......+||+.|+|||++.+ ..++.++|||||||
T Consensus 158 -----------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGv 196 (332)
T cd05623 158 -----------------------------------------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGV 196 (332)
T ss_pred -----------------------------------------ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHH
Confidence 00011468999999999863 34899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcC----CCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHR----VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~----~~p~~~~~~~p~~~~li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||...... ..+..+... .+|.......+...+|+.+||..+|.. |+++.|+++||||...
T Consensus 197 il~ell~g~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~ 272 (332)
T cd05623 197 CMYEMLYGETPFYAESLV-ETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI 272 (332)
T ss_pred HHHHHhcCCCCCCCCCHH-HHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence 9999999 67655443 233333322 123322233444559999999765544 6899999999999875
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=275.69 Aligned_cols=206 Identities=16% Similarity=0.210 Sum_probs=159.0
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.+++|+||+.+++ .+.+.. .+|++||| .|++|.+++.. ....+++..+..++.||+.||.|||+.||+
T Consensus 49 ~E~~il~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ii 124 (285)
T cd05630 49 NEKQILEKVNSRFVVSLAY-AYETKD---ALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIV 124 (285)
T ss_pred HHHHHHHhCCCCCeeeeeE-EEecCC---EEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 5778999999999999999 444443 68999999 89999999843 334589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||++.......
T Consensus 125 H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~------------------------------------------------ 156 (285)
T cd05630 125 YRDLKPENILLDDHGHIRISDLGLAVHVPEGQ------------------------------------------------ 156 (285)
T ss_pred eCCCCHHHEEECCCCCEEEeeccceeecCCCc------------------------------------------------
Confidence 99999999999999999999988763210000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++|+
T Consensus 157 -------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~ 193 (285)
T cd05630 157 -------------------------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYE 193 (285)
T ss_pred -------------------------------------------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHH
Confidence 0001367999999999998889999999999999999
Q ss_pred ccc---cCCCCchH--HHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEK--TRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~--~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|++ ||...... ......+.... +..+.. ..+...+|+.+||+.||.+||| +.|+++||||.+.
T Consensus 194 l~~g~~Pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~ 267 (285)
T cd05630 194 MIAGQSPFQQRKKKIKREEVERLVKEV-QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI 267 (285)
T ss_pred HHhCCCCCCCCCccchHHHHHhhhhhh-hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence 999 66543211 11111111111 112222 2344569999999999999999 8999999999875
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.7e-30 Score=269.19 Aligned_cols=212 Identities=17% Similarity=0.216 Sum_probs=162.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|++++||||+++++ ++.+. ..++++||| .|++|.+++.+.. .+++..++.++.||+.||+|||+.||
T Consensus 49 ~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i 123 (265)
T cd06631 49 LQEEVDLLKSLKHVNIVQYLG-TCLDD---NTISIFMEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLHNNCV 123 (265)
T ss_pred HHHHHHHHHhcCCCCEeeEee-EeecC---CeEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 446778999999999999999 55444 368999999 8999999995543 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||++++++.++|+|||.+......... ...
T Consensus 124 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------------------------------~~~------------ 161 (265)
T cd06631 124 VHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH------------------------------GTH------------ 161 (265)
T ss_pred ccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc------------------------------ccc------------
Confidence 99999999999999999999999887432111000 000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
........|+..|+|||.+.+..++.++|||||||++|
T Consensus 162 ------------------------------------------~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~ 199 (265)
T cd06631 162 ------------------------------------------SNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVF 199 (265)
T ss_pred ------------------------------------------cccccccCCCccccChhhhcCCCCcchhhHHHHHHHHH
Confidence 00000135789999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|++ ||...+...............+.+...++. ..+|+.+||+++|.+||++.++++||||
T Consensus 200 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 200 EMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred HHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 9999 665544433333222222222333334444 4599999999999999999999999997
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.9e-30 Score=274.70 Aligned_cols=211 Identities=15% Similarity=0.185 Sum_probs=158.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++..++||||+++++ ++..+. .+|++|||.+++|.+++......+++..++.++.||+.||.|||++||+
T Consensus 51 ~~~E~~~l~~l~h~nI~~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~ 126 (301)
T cd07873 51 AIREVSLLKDLKHANIVTLHD-IIHTEK---SLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVL 126 (301)
T ss_pred HHHHHHHHHhcCCCCcceEEE-EEecCC---eEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 346788999999999999999 554443 5799999966799999966556689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........
T Consensus 127 H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~----------------------------------------------- 159 (301)
T cd07873 127 HRDLKPQNLLINERGELKLADFGLARAKSIPTK----------------------------------------------- 159 (301)
T ss_pred CCCCCHHHEEECCCCcEEECcCcchhccCCCCC-----------------------------------------------
Confidence 999999999999999999999988733211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~ 302 (720)
......+++.|+|||++.+.. ++.++|||||||++|
T Consensus 160 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~ 196 (301)
T cd07873 160 -------------------------------------------TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFY 196 (301)
T ss_pred -------------------------------------------cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHH
Confidence 000124688999999987654 789999999999999
Q ss_pred hccc---cCCCCchHHHHHH--HhhcC------------------CCCcc-------c-cccCchHHHHHHHcCCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMS--SLRHR------------------VLPPQ-------L-LLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~--~l~~~------------------~~p~~-------~-~~~~p~~~~li~~~L~~dP~~ 351 (720)
||++ ||........... .+... ..+.. . ....+...+||.+||++||.+
T Consensus 197 el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~ 276 (301)
T cd07873 197 EMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRK 276 (301)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCccc
Confidence 9999 5654432211111 10000 00100 0 012234459999999999999
Q ss_pred CCChHHHHcCcccCCCc
Q 004998 352 RPKMGELLQSEFLNEPR 368 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~~ 368 (720)
|||+.|+|+||||....
T Consensus 277 R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 277 RISAEEAMKHPYFHCLG 293 (301)
T ss_pred CcCHHHHhcCccccccc
Confidence 99999999999998764
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-30 Score=267.92 Aligned_cols=210 Identities=16% Similarity=0.217 Sum_probs=161.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++++++||||+++++ ++.... ..+++||| .+++|.+++... ..+++..+..++.||+.||.|||+.|+
T Consensus 53 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~i 127 (267)
T cd06628 53 LAREIALLKELQHENIVQYLG-SSLDAD---HLNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNRGI 127 (267)
T ss_pred HHHHHHHHHhcCCCCeeeEEE-EEEeCC---ccEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhcCc
Confidence 346788999999999999999 444433 57899999 899999999554 448999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||+|+||++++++.++|+|||.+.......... ..
T Consensus 128 vH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~------------------------------~~------------ 165 (267)
T cd06628 128 IHRDIKGANILVDNKGGIKISDFGISKKLEANSLST------------------------------KT------------ 165 (267)
T ss_pred ccccCCHHHEEEcCCCCEEecccCCCcccccccccC------------------------------Cc------------
Confidence 999999999999999999999998874432110000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
........|+..|+|||.+.+..++.++|||||||++|
T Consensus 166 ------------------------------------------~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~ 203 (267)
T cd06628 166 ------------------------------------------NGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVV 203 (267)
T ss_pred ------------------------------------------cccccccCCCcCccChhHhccCCCCchhhhHHHHHHHH
Confidence 00001135788999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|++ ||........ ...+.....+ .+.... ....+||.+||++||.+||++.++++||||
T Consensus 204 ~l~~g~~p~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 204 EMLTGKHPFPDCTQLQA-IFKIGENASP-EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred HHhhCCCCCCCccHHHH-HHHHhccCCC-cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 9999 6665444322 2233232222 233333 344599999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-30 Score=265.27 Aligned_cols=206 Identities=18% Similarity=0.239 Sum_probs=162.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...|..++++++||||+++++ .+... ...|++||| .|++|.+++... ...+++..++.++.||+.||.|||+.|
T Consensus 46 ~~~e~~~l~~l~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~ 121 (256)
T cd08529 46 AIDEARVLAKLDSSYIIRYYE-SFLDK---GKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKK 121 (256)
T ss_pred HHHHHHHHHhcCCCCeehhee-eeccC---CEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 336777899999999999999 44433 268999999 899999999543 456899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+||+++.++.++|+|||.+........
T Consensus 122 i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~--------------------------------------------- 156 (256)
T cd08529 122 ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN--------------------------------------------- 156 (256)
T ss_pred cccCCCCcceEEEeCCCCEEEcccccceeccCccc---------------------------------------------
Confidence 99999999999999999999999887743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+++|+|||++.+..++.++|||||||++
T Consensus 157 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 191 (256)
T cd08529 157 ---------------------------------------------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVL 191 (256)
T ss_pred ---------------------------------------------hhhccccCccccCHHHhcCCCCCCccchHHHHHHH
Confidence 00013578899999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+|++ ||...... .....+.....++......+...+++.+||+.+|++||++.++++|||+
T Consensus 192 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 192 YECCTGKHPFDANNQG-ALILKIIRGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 99999 66655433 3333344444443322333455699999999999999999999999996
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.4e-30 Score=266.81 Aligned_cols=207 Identities=17% Similarity=0.245 Sum_probs=161.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...|..++++++||||+++++ .+.... ..+|++||| .+++|.+++.. ....+++.+++.++.||+.||.|||+.|
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~-~~~~~~--~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ 122 (257)
T cd08223 46 AEQEAQLLSQLKHPNIVAYRE-SWEGED--GLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKH 122 (257)
T ss_pred HHHHHHHHHhCCCCCeeeeee-eecCCC--CEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 346777899999999999998 333221 257999999 88999999954 3445899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+||+++.++.++|+|||.+....... .
T Consensus 123 i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~---------------------------------~------------ 157 (257)
T cd08223 123 ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC---------------------------------D------------ 157 (257)
T ss_pred eeccCCCchhEEEecCCcEEEecccceEEecccC---------------------------------C------------
Confidence 9999999999999999999999988773221100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|++.|+|||++.+..++.++|||||||++
T Consensus 158 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 192 (257)
T cd08223 158 ---------------------------------------------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCV 192 (257)
T ss_pred ---------------------------------------------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHH
Confidence 00013578899999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+|++ ||...+.. .....+..+.+++......+...+|+.+||.++|.+||++.++++||||
T Consensus 193 ~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 193 YEMATLKHAFNAKDMN-SLVYRIIEGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHcCCCCCCCCCHH-HHHHHHHhcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 99999 56544433 2333333443433322333455699999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-30 Score=271.89 Aligned_cols=205 Identities=17% Similarity=0.216 Sum_probs=154.9
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~--~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.+++||||+++++ ++..+. .+|+||||..++|.+++.. .+..+++..++.++.||+.||.|||++||+
T Consensus 48 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~ 123 (285)
T cd07861 48 REISLLKELQHPNIVCLQD-VLMQES---RLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVL 123 (285)
T ss_pred HHHHHHHhcCCCCEeeeEE-EEeeCC---eEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 5778999999999999999 454443 6799999966799999843 224589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||++...+.+..
T Consensus 124 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------- 156 (285)
T cd07861 124 HRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR----------------------------------------------- 156 (285)
T ss_pred ecCCCHHHEEEcCCCcEEECcccceeecCCCcc-----------------------------------------------
Confidence 999999999999999999999988743221100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~ 302 (720)
......+++.|+|||.+.+.. ++.++|||||||++|
T Consensus 157 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~ 193 (285)
T cd07861 157 -------------------------------------------VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFA 193 (285)
T ss_pred -------------------------------------------cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHH
Confidence 000125688999999987654 789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCC-------------------C--------CccccccCchHHHHHHHcCCCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRV-------------------L--------PPQLLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~-------------------~--------p~~~~~~~p~~~~li~~~L~~dP~~R 352 (720)
+|++ ||............+.... . ........++..+||.+||+.||.+|
T Consensus 194 ~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R 273 (285)
T cd07861 194 EMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKR 273 (285)
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhC
Confidence 9999 5554433222222111000 0 00011123445599999999999999
Q ss_pred CChHHHHcCccc
Q 004998 353 PKMGELLQSEFL 364 (720)
Q Consensus 353 pta~eiL~hp~~ 364 (720)
||+.+++.||||
T Consensus 274 pt~~~ll~~~~~ 285 (285)
T cd07861 274 ISAKKALNHPYF 285 (285)
T ss_pred CCHHHHhcCCCC
Confidence 999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.6e-30 Score=267.31 Aligned_cols=211 Identities=18% Similarity=0.201 Sum_probs=158.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ ++.... ...++++||| .+++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 50 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~ 126 (266)
T cd06651 50 ALECEIQLLKNLQHERIVQYYG-CLRDRA-EKTLTIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLHSNM 126 (266)
T ss_pred HHHHHHHHHHHcCCCCeeeEEE-EEEcCC-CCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4456778999999999999999 443322 2367999999 8899999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||++........ .+.
T Consensus 127 i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~-------------------------------~~~----------- 164 (266)
T cd06651 127 IVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM-------------------------------SGT----------- 164 (266)
T ss_pred eeeCCCCHHHEEECCCCCEEEccCCCccccccccc-------------------------------cCC-----------
Confidence 99999999999999999999999887733210000 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++|||||||++
T Consensus 165 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~ 199 (266)
T cd06651 165 ---------------------------------------------GIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTV 199 (266)
T ss_pred ---------------------------------------------ccccCCccccccCHHHhCCCCCCchhhhHHHHHHH
Confidence 00013568899999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
|||++ ||.......... .+......+.+....+.. .+|+ +||..+|++||+++|+++||||+
T Consensus 200 ~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 200 VEMLTEKPPWAEYEAMAAIF-KIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred HHHHHCCCCccccchHHHHH-HHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 99999 565443333332 222222233333333333 4666 67789999999999999999986
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.9e-31 Score=302.30 Aligned_cols=236 Identities=18% Similarity=0.232 Sum_probs=179.8
Q ss_pred CccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Q 004998 58 NDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 58 ~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
...-||+||+ +|...+.++|++++. .|+++. ++|+|||| +||+|..+|.+.+ .+|+.-++.|+..|+.||+-
T Consensus 118 ~tA~F~EERD--imv~~ns~Wiv~Lhy-AFQD~~---~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAlds 190 (1317)
T KOG0612|consen 118 ETACFREERD--IMVFGNSEWIVQLHY-AFQDER---YLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDS 190 (1317)
T ss_pred hHHHHHHHhH--HHHcCCcHHHHHHHH-HhcCcc---ceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHH
Confidence 3566788888 667778999999998 677775 67999999 9999999997777 69999999999999999999
Q ss_pred HHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||+.|+|||||||+||||+..|++||+|||.|-..+.+ |.+
T Consensus 191 lH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~d------------------------------------G~V--- 231 (1317)
T KOG0612|consen 191 LHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDAD------------------------------------GTV--- 231 (1317)
T ss_pred HHhccceeccCCcceeEecccCcEeeccchhHHhcCCC------------------------------------CcE---
Confidence 99999999999999999999999999999999443322 111
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc----C-CCCCcc
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA----G-APVSCA 291 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~----~-~~~s~~ 291 (720)
.....+|||.|++||++. + +.|++.
T Consensus 232 --------------------------------------------------~s~~aVGTPDYISPEvLqs~~~~~g~yG~e 261 (1317)
T KOG0612|consen 232 --------------------------------------------------RSSVAVGTPDYISPEVLQSQGDGKGEYGRE 261 (1317)
T ss_pred --------------------------------------------------EeccccCCCCccCHHHHHhhcCCccccCCc
Confidence 112258999999999994 2 349999
Q ss_pred ccchhhhhhhhhccc---cCCCCchHHHHHHHhh-c---CCCCccccccCchHHHHHHHcCCCCCCCCCC---hHHHHcC
Q 004998 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLR-H---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQS 361 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~-~---~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt---a~eiL~h 361 (720)
+|+|||||++|||++ ||....-. .++..|. + -.+|+. ....+...+||.++| -+|+.|.. +++|..|
T Consensus 262 cDwWSlGV~~YEMlyG~TPFYadslv-eTY~KIm~hk~~l~FP~~-~~VSeeakdLI~~ll-~~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 262 CDWWSLGVFMYEMLYGETPFYADSLV-ETYGKIMNHKESLSFPDE-TDVSEEAKDLIEALL-CDREVRLGRNGIEDIKNH 338 (1317)
T ss_pred cchhhhHHHHHHHHcCCCcchHHHHH-HHHHHHhchhhhcCCCcc-cccCHHHHHHHHHHh-cChhhhcccccHHHHHhC
Confidence 999999999999998 88876544 3333333 3 234522 233344459999988 57888886 9999999
Q ss_pred cccCCCccchHHHHHHHHHhhhhhHHHHHHHH
Q 004998 362 EFLNEPRDSMEEREAAIELREQIDEEELLLEF 393 (720)
Q Consensus 362 p~~~~~~~~l~e~~~~~~~~e~~~~~e~L~~f 393 (720)
|||.+..- -.-++..+|+.+..........|
T Consensus 339 pFF~g~~W-~~iR~~~pP~vPevssd~DTsnF 369 (1317)
T KOG0612|consen 339 PFFEGIDW-DNIRESVPPVVPEVSSDDDTSNF 369 (1317)
T ss_pred ccccCCCh-hhhhhcCCCCCCcCCCCCccccc
Confidence 99998733 22334445555544443334444
|
|
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.7e-30 Score=272.13 Aligned_cols=212 Identities=17% Similarity=0.256 Sum_probs=156.6
Q ss_pred eehhhhcccCCCCCceecccceeecCC-----CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEA-----AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~-----~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+|..++++++||||+++++ ++.... .....+++|||.+++|.+++......+++.+++.++.||+.||.|||+
T Consensus 59 ~~e~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~ 137 (310)
T cd07865 59 LREIKILQLLKHENVVNLIE-ICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHR 137 (310)
T ss_pred HHHHHHHHhCCCCCccceEE-EEecccccccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 36778999999999999999 443332 224579999997789999986655569999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+|+||||+||+++.++.++|+|||.+......... .
T Consensus 138 ~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~--------- 176 (310)
T cd07865 138 NKILHRDMKAANILITKDGILKLADFGLARAFSLSKNS--------------------------------K--------- 176 (310)
T ss_pred CCeeccCCCHHHEEECCCCcEEECcCCCcccccCCccc--------------------------------C---------
Confidence 99999999999999999999999999887432111000 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLG 298 (720)
+.......++..|+|||.+.+.. ++.++||||||
T Consensus 177 ---------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG 211 (310)
T cd07865 177 ---------------------------------------------PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAG 211 (310)
T ss_pred ---------------------------------------------CCCccCcccCccccCcHHhcCCcccCchhhhHHHH
Confidence 00000135788999999987654 78999999999
Q ss_pred hhhhhccc---cCCCCchHH--HHHHHhhcCCCCccc---------------------------c--ccCchHHHHHHHc
Q 004998 299 VLLFELFC---PFSTGEEKT--RTMSSLRHRVLPPQL---------------------------L--LKFPKEASFCLWL 344 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~--~~~~~l~~~~~p~~~---------------------------~--~~~p~~~~li~~~ 344 (720)
|++|||++ ||....... .....+... +++.. . ...+...+||.+|
T Consensus 212 ~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~ 290 (310)
T cd07865 212 CIMAEMWTRSPIMQGNTEQHQLTLISQLCGS-ITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKL 290 (310)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC-CChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHH
Confidence 99999998 454433221 111111111 11100 0 0123445899999
Q ss_pred CCCCCCCCCChHHHHcCccc
Q 004998 345 LHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 345 L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+.||.+|||++|+|+||||
T Consensus 291 l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 291 LVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred hcCChhhccCHHHHhcCCCC
Confidence 99999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.1e-30 Score=268.64 Aligned_cols=203 Identities=14% Similarity=0.176 Sum_probs=156.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...+|...+.+++||||+++++ ++.... .+++|||| .+++|.+++......+++..++.++.||+.||+|||++|
T Consensus 52 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~ 127 (266)
T cd05064 52 GFLAEALTLGQFDHSNIVRLEG-VITRGN---TMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMG 127 (266)
T ss_pred HHHHHHHHHhcCCCCCcCeEEE-EEecCC---CcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3457888999999999999999 444433 57999999 889999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+|||++.++.++++|||.+....... .
T Consensus 128 iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~----------------------------------~----------- 162 (266)
T cd05064 128 YVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA----------------------------------I----------- 162 (266)
T ss_pred EeeccccHhhEEEcCCCcEEECCCcccccccccc----------------------------------h-----------
Confidence 9999999999999999999998888652210000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......++..|+|||.+.+..++.++|||||||++
T Consensus 163 -------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 198 (266)
T cd05064 163 -------------------------Y-------------------TTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVM 198 (266)
T ss_pred -------------------------h-------------------cccCCCCceeecCHHHHhhCCccchhHHHHHHHHH
Confidence 0 00002346789999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..++. +..+| ...+++..||.++|.+||++.+|++
T Consensus 199 ~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 199 WEVMSYGERPYWDMSGQ-DVIKAVEDGFRLPA-PRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred HHHhcCCCCCcCcCCHH-HHHHHHHCCCCCCC-CCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 99775 66554433 33444444433332 33444 4459999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.4e-29 Score=268.05 Aligned_cols=210 Identities=17% Similarity=0.213 Sum_probs=160.0
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+++.++||||+++++ .+..+. .+|+|||| .|++|..++.+....+++..++.++.||+.||.|||++||+|
T Consensus 58 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H 133 (292)
T cd06644 58 VEIEILATCNHPYIVKLLG-AFYWDG---KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIH 133 (292)
T ss_pred HHHHHHHhCCCCcEeeeEE-EEEeCC---eEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeee
Confidence 5777899999999999999 444332 68999999 899999888655556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.++|+|||.+.......
T Consensus 134 ~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~------------------------------------------------- 164 (292)
T cd06644 134 RDLKAGNVLLTLDGDIKLADFGVSAKNVKTL------------------------------------------------- 164 (292)
T ss_pred cCCCcceEEEcCCCCEEEccCccceeccccc-------------------------------------------------
Confidence 9999999999999999999998763211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----CCCCccccchhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDIwSLGv 299 (720)
.......+++.|+|||++.+ ..++.++|||||||
T Consensus 165 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~ 203 (292)
T cd06644 165 -----------------------------------------QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGI 203 (292)
T ss_pred -----------------------------------------cccceecCCccccCceeeccccccCCCCCchhhhHhHHH
Confidence 00001357889999999853 34788999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCc-cccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
++|||++ ||...... .....+.....+. .....+ .+..+|+.+||+.+|++||++.++++||||......
T Consensus 204 il~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 278 (292)
T cd06644 204 TLIEMAQIEPPHHELNPM-RVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSN 278 (292)
T ss_pred HHHHHhcCCCCCccccHH-HHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccc
Confidence 9999999 55443332 2223333222221 112223 345699999999999999999999999999876443
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.3e-30 Score=266.82 Aligned_cols=209 Identities=16% Similarity=0.214 Sum_probs=155.7
Q ss_pred eehhhhcccC-CCCCceecccceeecCCC--CCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAA--IDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~--~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..|..++.++ +||||+++++.+...... ...+|++||| .+++|.+++.. ....+++..++.++.||+.||+|||+
T Consensus 50 ~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~ 129 (272)
T cd06637 50 KQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ 129 (272)
T ss_pred HHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3566677777 799999999944433221 2358999999 88999999954 33458999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+|+||||+||+++.++.++|+|||++...... .+
T Consensus 130 ~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~-----------------------------------~~-------- 166 (272)
T cd06637 130 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT-----------------------------------VG-------- 166 (272)
T ss_pred CCCccCCCCHHHEEECCCCCEEEccCCCceecccc-----------------------------------cc--------
Confidence 99999999999999999999999999887322100 00
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----CCCCccccc
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDI 294 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDI 294 (720)
......|++.|+|||++.+ ..++.++||
T Consensus 167 -----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv 199 (272)
T cd06637 167 -----------------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDL 199 (272)
T ss_pred -----------------------------------------------cCCcccccccccCHhHhccccCcCCCCCchhhH
Confidence 0011467899999999863 348889999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|||||++|||++ ||.............. ...+......++ ...+|+.+||..+|.+|||+.+++.||||
T Consensus 200 ~slGv~l~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 200 WSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred HHHHHHHHHHHhCCCCccccCHHHHHHHHhc-CCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 999999999999 5544333322222221 111222222333 44599999999999999999999999997
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.4e-30 Score=267.87 Aligned_cols=208 Identities=20% Similarity=0.260 Sum_probs=160.8
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++++++||||+++++ .+.... .+|+|||| .+++|.+++.+....+++..++.++.||+.||.|||++||+
T Consensus 50 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~ 125 (280)
T cd06611 50 MVEIDILSECKHPNIVGLYE-AYFYEN---KLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVI 125 (280)
T ss_pred HHHHHHHHhCCCCceeEEEE-EEecCC---eEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 35777999999999999999 444433 57999999 89999999966556699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+.......
T Consensus 126 h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~------------------------------------------------ 157 (280)
T cd06611 126 HRDLKAGNILLTLDGDVKLADFGVSAKNKSTL------------------------------------------------ 157 (280)
T ss_pred cCCCChhhEEECCCCCEEEccCccchhhcccc------------------------------------------------
Confidence 99999999999999999999888763211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-----CCCCCccccchhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLG 298 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSLG 298 (720)
.......|++.|+|||++. ...++.++||||||
T Consensus 158 ------------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG 195 (280)
T cd06611 158 ------------------------------------------QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLG 195 (280)
T ss_pred ------------------------------------------cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHH
Confidence 0001135789999999985 33478899999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCc-cccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|||++ ||...... ..+..+.....+. .....+ +...+|+.+||+.+|.+||++.++|+||||...
T Consensus 196 ~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~ 268 (280)
T cd06611 196 ITLIELAQMEPPHHELNPM-RVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ 268 (280)
T ss_pred HHHHHHHhCCCCcccCCHH-HHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence 99999999 55544333 3333333332221 112233 345599999999999999999999999999886
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.9e-30 Score=266.45 Aligned_cols=204 Identities=18% Similarity=0.250 Sum_probs=155.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ .+.... .+|++||| .+++|.+++...+ .+++.+++.++.||+.||.|||++||+
T Consensus 54 ~~e~~~~~~l~h~~ii~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~ 128 (267)
T cd06645 54 QQEIIMMKDCKHSNIVAYFG-SYLRRD---KLWICMEFCGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLHSKGKM 128 (267)
T ss_pred HHHHHHHHhCCCCCeeeEEE-EEEeCC---EEEEEEeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 35777899999999999999 444433 57999999 8899999985544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........
T Consensus 129 H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------- 161 (267)
T cd06645 129 HRDIKGANILLTDNGHVKLADFGVSAQITATIA----------------------------------------------- 161 (267)
T ss_pred cCCCCHHHEEECCCCCEEECcceeeeEccCccc-----------------------------------------------
Confidence 999999999999999999999988733211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CCCCCccccchhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGvl 300 (720)
......|++.|+|||.+. ...++.++|||||||+
T Consensus 162 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~i 198 (267)
T cd06645 162 -------------------------------------------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGIT 198 (267)
T ss_pred -------------------------------------------ccccccCcccccChhhhccccCCCCCchhhhHHHHHH
Confidence 000136789999999984 4448899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccc--cCc-hHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFP-KEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~--~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
+|+|++ ||..................++.+.. .++ ...+|+.+||..+|++||++.++++|||
T Consensus 199 l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 199 AIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred HHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 999999 55443332222222222222322221 233 3459999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.8e-30 Score=266.86 Aligned_cols=208 Identities=17% Similarity=0.204 Sum_probs=162.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..++..++||||+++++ .+.++. .+|++||| .+++|.+++.+.. .+++..+..++.||+.||.|||++|+
T Consensus 40 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH~~~~ 114 (262)
T cd05572 40 IFSEKEILEECNHPFIVKLYR-TFKDKK---YIYMLMEYCLGGELWTILRDRG-LFDEYTARFYIACVVLAFEYLHNRGI 114 (262)
T ss_pred HHHHHHHHHhCCCCCEeeeee-eEEcCC---ccEEEEecCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence 336677899999999999999 554443 57999999 8999999995543 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+.......
T Consensus 115 ~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~----------------------------------------------- 147 (262)
T cd05572 115 IYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ----------------------------------------------- 147 (262)
T ss_pred ccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-----------------------------------------------
Confidence 999999999999999999999988773321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||.+.+..++.++|+|||||++|
T Consensus 148 --------------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~ 183 (262)
T cd05572 148 --------------------------------------------KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLY 183 (262)
T ss_pred --------------------------------------------ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHH
Confidence 000135788999999998888999999999999999
Q ss_pred hccc---cCCCCc-hHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~-~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
+|++ ||.... .....+..+..+......+.. .+...+|+.+||..+|.+||+ +.|+++||||+..
T Consensus 184 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 258 (262)
T cd05572 184 ELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF 258 (262)
T ss_pred HHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence 9999 665544 122333333322222222222 345569999999999999999 9999999999864
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-30 Score=278.90 Aligned_cols=222 Identities=16% Similarity=0.194 Sum_probs=162.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..+|.+++||||+++++.+.........+|++|||.+++|.+++.... .+++..++.++.||+.||.|||++||+
T Consensus 51 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~iv 129 (334)
T cd07855 51 TLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLMESDLHHIIHSDQ-PLTEEHIRYFLYQLLRGLKYIHSANVI 129 (334)
T ss_pred HHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhhhhHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3467889999999999999994433333445789999996679999995443 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.+||+|||.+......... .
T Consensus 130 H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------------------------------~-------------- 164 (334)
T cd07855 130 HRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE-------------------------------H-------------- 164 (334)
T ss_pred cCCCCHHHEEEcCCCcEEecccccceeecccCcC-------------------------------C--------------
Confidence 9999999999999999999999887432111000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~ 302 (720)
.......+|+.+|+|||.+.+ ..++.++|||||||++|
T Consensus 165 -----------------------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~ 203 (334)
T cd07855 165 -----------------------------------------KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFA 203 (334)
T ss_pred -----------------------------------------CcccccccccccccChHHhcCCcccccccchHHHHHHHH
Confidence 000011467899999999866 34899999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc-CC--------------------CC---c----cc-cccCchHHHHHHHcCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH-RV--------------------LP---P----QL-LLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~-~~--------------------~p---~----~~-~~~~p~~~~li~~~L~~dP~ 350 (720)
||++ ||............... +. ++ + .+ ....+...+||.+||+.+|.
T Consensus 204 el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 283 (334)
T cd07855 204 EMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPE 283 (334)
T ss_pred HHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChh
Confidence 9998 56543322111100000 00 00 0 00 11234445999999999999
Q ss_pred CCCChHHHHcCcccCCCccchH
Q 004998 351 GRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
+||++.++++||||.+...+..
T Consensus 284 ~Rpt~~~~l~~~~~~~~~~~~~ 305 (334)
T cd07855 284 ERITVEQALQHPFLAQYHDPDD 305 (334)
T ss_pred hCcCHHHHHhChhhhhccCCcc
Confidence 9999999999999988755443
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-30 Score=292.42 Aligned_cols=210 Identities=15% Similarity=0.139 Sum_probs=155.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~----~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
++|+.+|.+++|||||++++ ++.... ..|+++|+.+++|.+++... .......+++.|+.||+.||.|||++
T Consensus 211 ~~Ei~il~~l~HpnIv~l~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~ 286 (501)
T PHA03210 211 ENEILALGRLNHENILKIEE-ILRSEA---NTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK 286 (501)
T ss_pred HHHHHHHHhCCCCCcCcEeE-EEEECC---eeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC
Confidence 47888999999999999999 555544 56899999778899888332 12234677889999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|||||||||+|||++.++.+||+|||++..+......
T Consensus 287 gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~------------------------------------------- 323 (501)
T PHA03210 287 KLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREA------------------------------------------- 323 (501)
T ss_pred CeecCCCCHHHEEECCCCCEEEEeCCCceecCccccc-------------------------------------------
Confidence 9999999999999999999999999988443211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+..++.++|||||||+
T Consensus 324 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 357 (501)
T PHA03210 324 ----------------------------------------------FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLI 357 (501)
T ss_pred ----------------------------------------------ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHH
Confidence 0011468999999999999889999999999999
Q ss_pred hhhccc----cCCCC--chHHHHHHHhhc-----CCCCc-----------------------ccc--ccCchHHHHHHHc
Q 004998 301 LFELFC----PFSTG--EEKTRTMSSLRH-----RVLPP-----------------------QLL--LKFPKEASFCLWL 344 (720)
Q Consensus 301 l~eLlt----pf~~~--~~~~~~~~~l~~-----~~~p~-----------------------~~~--~~~p~~~~li~~~ 344 (720)
+|||++ ||... .........+.. ..+|. .+. ...++..++|.+|
T Consensus 358 l~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~km 437 (501)
T PHA03210 358 LLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKM 437 (501)
T ss_pred HHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHH
Confidence 999998 33221 111122221111 00110 000 0112334789999
Q ss_pred CCCCCCCCCChHHHHcCcccCCC
Q 004998 345 LHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 345 L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++||.+|||+.|+|+||||...
T Consensus 438 L~~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 438 LTFDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred hccCcccCcCHHHHhhChhhhcC
Confidence 99999999999999999999875
|
|
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.5e-30 Score=263.08 Aligned_cols=204 Identities=16% Similarity=0.200 Sum_probs=158.0
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++++++||||+++++ .+... ..+|+++|| .+++|.+++......+++..++.++.||+.||.|||+.||+|
T Consensus 47 ~e~~~~~~l~~~~i~~~~~-~~~~~---~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H 122 (256)
T cd06612 47 KEISILKQCDSPYIVKYYG-SYFKN---TDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIH 122 (256)
T ss_pred HHHHHHHhCCCCcEeeeee-eeecC---CcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5667889999999999999 44444 368999999 889999999665667999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
+||+|+||+++.++.++|+|||.+........
T Consensus 123 ~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 154 (256)
T cd06612 123 RDIKAGNILLNEEGQAKLADFGVSGQLTDTMA------------------------------------------------ 154 (256)
T ss_pred CCCCcceEEECCCCcEEEcccccchhcccCcc------------------------------------------------
Confidence 99999999999999999999888733211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
......|+..|+|||.+.+..++.++|||||||++|+|
T Consensus 155 ------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l 192 (256)
T cd06612 155 ------------------------------------------KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEM 192 (256)
T ss_pred ------------------------------------------ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHH
Confidence 00013568889999999888899999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCc-cccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 305 FC---PFSTGEEKTRTMSSLRHRVLPP-QLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
++ ||......... ..+.....+. .....+ +...+|+.+||+.+|.+|||+.|+|+||||
T Consensus 193 ~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 193 AEGKPPYSDIHPMRAI-FMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred HhCCCCCCCcchhhhh-hhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 99 55543332222 1221111111 111122 344599999999999999999999999997
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=265.82 Aligned_cols=204 Identities=18% Similarity=0.290 Sum_probs=151.8
Q ss_pred ehhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..++.++. ||||+++++ ++.+... ..++++|||.+++|.+++......+++.+++.++.||+.||.|||+.||+|
T Consensus 46 ~e~~~l~~l~~h~~i~~~~~-~~~~~~~-~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H 123 (282)
T cd07831 46 REIQALRRLSPHPNILRLIE-VLFDRKT-GRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFH 123 (282)
T ss_pred HHHHHHhhcCCCCCccceEE-EEecCCC-CcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 5666777775 999999999 4544422 257999999667999999654456899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++. +.++|+|||.+....... .+
T Consensus 124 ~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~---------------------------------~~-------------- 155 (282)
T cd07831 124 RDIKPENILIKD-DILKLADFGSCRGIYSKP---------------------------------PY-------------- 155 (282)
T ss_pred cccCHHHEEEcC-CCeEEEecccccccccCC---------------------------------Cc--------------
Confidence 999999999999 999999998874321100 00
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~e 303 (720)
....+++.|+|||++.. ..++.++|||||||++||
T Consensus 156 --------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~e 191 (282)
T cd07831 156 --------------------------------------------TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFE 191 (282)
T ss_pred --------------------------------------------CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHH
Confidence 01356889999998754 447899999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc--------------------CCCCcc-------cccc-CchHHHHHHHcCCCCCCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRH--------------------RVLPPQ-------LLLK-FPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~--------------------~~~p~~-------~~~~-~p~~~~li~~~L~~dP~~R 352 (720)
|++ ||...+.... ...+.. ...++. +... .....+||.+||+++|++|
T Consensus 192 l~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 270 (282)
T cd07831 192 ILSLFPLFPGTNELDQ-IAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDER 270 (282)
T ss_pred HHcCCcCCCCCCHHHH-HHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccc
Confidence 998 6654433211 111110 001110 0111 2344599999999999999
Q ss_pred CChHHHHcCccc
Q 004998 353 PKMGELLQSEFL 364 (720)
Q Consensus 353 pta~eiL~hp~~ 364 (720)
|++.++++||||
T Consensus 271 ~~~~~~l~~~~~ 282 (282)
T cd07831 271 ITAKQALRHPYF 282 (282)
T ss_pred cCHHHHhhCCCC
Confidence 999999999997
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-30 Score=276.28 Aligned_cols=205 Identities=18% Similarity=0.235 Sum_probs=156.4
Q ss_pred ehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++..+. ||+|+++++ ++.... .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++||+
T Consensus 49 ~e~~~l~~~~~~~~i~~~~~-~~~~~~---~~~lv~Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~~iv 123 (323)
T cd05615 49 VEKRVLALQDKPPFLTQLHS-CFQTVD---RLYFVMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFLHRRGII 123 (323)
T ss_pred HHHHHHHhccCCCchhheee-EEecCC---EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 4555666665 566777887 555543 58999999 8999999995544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++........
T Consensus 124 HrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~----------------------------------------------- 156 (323)
T cd05615 124 YRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGV----------------------------------------------- 156 (323)
T ss_pred ccCCCHHHeEECCCCCEEEeccccccccCCCCc-----------------------------------------------
Confidence 999999999999999999999988732110000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 157 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~e 193 (323)
T cd05615 157 -------------------------------------------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYE 193 (323)
T ss_pred -------------------------------------------cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHH
Confidence 0001368999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+...... ......+...+|+.+||+.+|.+|++ ..++++||||...
T Consensus 194 lltG~~pf~~~~~~-~~~~~i~~~~~~-~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 194 MLAGQPPFDGEDED-ELFQSIMEHNVS-YPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI 263 (323)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhCCCC-CCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence 999 66655443 233333322211 11122344569999999999999997 4789999999875
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-30 Score=269.67 Aligned_cols=207 Identities=18% Similarity=0.252 Sum_probs=160.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.+++|+||+.+++ .+..+. .+|++||| .+++|.+++.. ....+++..+..++.||+.||.|||+.||
T Consensus 48 ~~E~~il~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i 123 (285)
T cd05632 48 LNEKQILEKVNSQFVVNLAY-AYETKD---ALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENT 123 (285)
T ss_pred HHHHHHHHHcCCcCceeEEE-EEecCC---EEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 35778999999999999988 444433 67999999 88999998843 33459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||++.......
T Consensus 124 iH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~----------------------------------------------- 156 (285)
T cd05632 124 VYRDLKPENILLDDYGHIRISDLGLAVKIPEGE----------------------------------------------- 156 (285)
T ss_pred eecCCCHHHEEECCCCCEEEecCCcceecCCCC-----------------------------------------------
Confidence 999999999999999999999998763210000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||.+.+..++.++|||||||++|
T Consensus 157 --------------------------------------------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~ 192 (285)
T cd05632 157 --------------------------------------------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIY 192 (285)
T ss_pred --------------------------------------------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHH
Confidence 000136799999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCC--CccccccC-chHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKF-PKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~~~~-p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
||++ ||........ ...+..... ...+.... +...+|+.+||..||++||+ +.++++|+||...
T Consensus 193 ~l~~g~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~ 267 (285)
T cd05632 193 EMIEGQSPFRGRKEKVK-REEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNM 267 (285)
T ss_pred HHHhCCCCCCCCCHHHH-HHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence 9999 6655433211 111111111 11222233 34569999999999999999 8899999999987
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-29 Score=270.24 Aligned_cols=208 Identities=15% Similarity=0.193 Sum_probs=161.3
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..++..++||||+++++ .+..+. ..|+|||| .|++|.+++... .+++.++..++.||+.||.|||+.||+|
T Consensus 66 ~e~~~l~~~~h~~v~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH~~gi~H 139 (296)
T cd06654 66 NEILVMRENKNPNIVNYLD-SYLVGD---ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIH 139 (296)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEEeCC---EEEEeecccCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5677889999999999999 444433 68999999 899999998543 3899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.++|+|||.+....... .
T Consensus 140 ~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~---------------------------------~--------------- 171 (296)
T cd06654 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------------------------S--------------- 171 (296)
T ss_pred CCCCHHHEEEcCCCCEEECccccchhccccc---------------------------------c---------------
Confidence 9999999999999999999988763211000 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
......|++.|+|||.+.+..++.++|||||||++|+|
T Consensus 172 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l 209 (296)
T cd06654 172 ------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM 209 (296)
T ss_pred ------------------------------------------ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHH
Confidence 00013578899999999888899999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 305 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
++ ||..................+....... +...+|+.+||.++|.+||++.++++||||.....
T Consensus 210 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~ 278 (296)
T cd06654 210 IEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP 278 (296)
T ss_pred HhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence 99 6655444333222222222221222223 34559999999999999999999999999987633
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-30 Score=263.97 Aligned_cols=209 Identities=20% Similarity=0.294 Sum_probs=163.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+...|..+++.++||||+++++.+. ... ...+|++||| .+++|.+++.. ....+++..++.++.||+.||.|||
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~-~~~-~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH 122 (265)
T cd08217 45 QLVSEVNILRELKHPNIVRYYDRII-DRS-NQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECH 122 (265)
T ss_pred HHHHHHHHHHhcCCCccceeeeeee-cCC-CCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 3346778899999999999999333 222 2357999999 89999999943 2456899999999999999999999
Q ss_pred -----HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccc
Q 004998 139 -----SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 139 -----s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
+.+|+|+||||+||+++.++.++|+|||.+....... .+
T Consensus 123 ~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~---------------------------------~~--- 166 (265)
T cd08217 123 NRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDS---------------------------------SF--- 166 (265)
T ss_pred cCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCc---------------------------------cc---
Confidence 9999999999999999999999999998874332110 00
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcccc
Q 004998 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.....|++.|+|||.+.+..++.++|
T Consensus 167 ------------------------------------------------------~~~~~~~~~~~~pE~~~~~~~~~~~D 192 (265)
T cd08217 167 ------------------------------------------------------AKTYVGTPYYMSPEQLNHMSYDEKSD 192 (265)
T ss_pred ------------------------------------------------------ccccccCCCccChhhhcCCCCCchhH
Confidence 00135788999999998888999999
Q ss_pred chhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+||||+++|+|++ ||.... .......+..+..++......+...+|+.+||..+|.+||++.+|++|||+
T Consensus 193 v~slG~il~~l~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~ 265 (265)
T cd08217 193 IWSLGCLIYELCALSPPFTARN-QLQLASKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI 265 (265)
T ss_pred HHHHHHHHHHHHHCCCcccCcC-HHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence 9999999999999 565543 234444455444433322233445599999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-30 Score=270.98 Aligned_cols=208 Identities=20% Similarity=0.258 Sum_probs=166.3
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..+|..++.|.||.+-. .|+..+ .+|+||.. .||+|.-+|-+ ..+.+++..++.|+.+|+.||.+||..+||
T Consensus 234 nEk~iL~kV~s~FiVslaY-AfeTkd---~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iV 309 (591)
T KOG0986|consen 234 NEKQILEKVSSPFIVSLAY-AFETKD---ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIV 309 (591)
T ss_pred HHHHHHHHhccCcEEEEee-eecCCC---ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhccee
Confidence 6788999999999999977 666665 56999999 99999988844 345699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
.|||||+|||+++.|+|+|+|+|+|.++....
T Consensus 310 YRDLKPeNILLDd~GhvRISDLGLAvei~~g~------------------------------------------------ 341 (591)
T KOG0986|consen 310 YRDLKPENILLDDHGHVRISDLGLAVEIPEGK------------------------------------------------ 341 (591)
T ss_pred eccCChhheeeccCCCeEeeccceEEecCCCC------------------------------------------------
Confidence 99999999999999999999999985431110
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
|. ...+||.+|||||++.+..|+.+.|+|||||+|||
T Consensus 342 -----------------------------------------~~--~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYe 378 (591)
T KOG0986|consen 342 -----------------------------------------PI--RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYE 378 (591)
T ss_pred -----------------------------------------cc--ccccCcccccCHHHHcCCcccCCccHHHHHhHHHH
Confidence 00 11489999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCC--CCccccccCchHH-HHHHHcCCCCCCCCC-----ChHHHHcCcccCCCcc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPKEA-SFCLWLLHPEPSGRP-----KMGELLQSEFLNEPRD 369 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p~~~-~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~~~ 369 (720)
|+. ||....+.. -...+.+++ -+..+....++++ +||..+|+.||++|. .+.++.+||||+...-
T Consensus 379 mi~G~sPFr~~KeKv-k~eEvdrr~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw 454 (591)
T KOG0986|consen 379 MIAGHSPFRQRKEKV-KREEVDRRTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNW 454 (591)
T ss_pred HHcccCchhhhhhhh-hHHHHHHHHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCH
Confidence 998 665443321 111222222 2334445555555 999999999999996 6889999999998733
|
|
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-29 Score=270.07 Aligned_cols=214 Identities=18% Similarity=0.208 Sum_probs=160.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..++.+++||||+++++ ++.... ...+++||||.+++|.+++......+++.+++.++.||+.||.|||+.|++|
T Consensus 54 ~~E~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H 131 (309)
T cd07845 54 LREITLLLNLRHPNIVELKE-VVVGKH-LDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIH 131 (309)
T ss_pred hHHHHHHHhCCCCCCcceEE-EEecCC-CCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 36788999999999999999 443322 2357999999777999999655566999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.++|+|||.+...+....
T Consensus 132 ~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~------------------------------------------------ 163 (309)
T cd07845 132 RDLKVSNLLLTDKGCLKIADFGLARTYGLPAK------------------------------------------------ 163 (309)
T ss_pred CCCCHHHEEECCCCCEEECccceeeecCCccC------------------------------------------------
Confidence 99999999999999999999988743321100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~e 303 (720)
......+++.|+|||.+.+. .++.++|||||||++||
T Consensus 164 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~e 201 (309)
T cd07845 164 ------------------------------------------PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAE 201 (309)
T ss_pred ------------------------------------------CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHH
Confidence 00012457889999998764 48999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcC--------------------CCCcc--------ccccCchHHHHHHHcCCCCCCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHR--------------------VLPPQ--------LLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~--------------------~~p~~--------~~~~~p~~~~li~~~L~~dP~~R 352 (720)
|++ ||................ .++.. +....+...+||.+||++||++|
T Consensus 202 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R 281 (309)
T cd07845 202 LLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKR 281 (309)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhC
Confidence 999 555443332221111100 00000 01123445699999999999999
Q ss_pred CChHHHHcCcccCCCccc
Q 004998 353 PKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 353 pta~eiL~hp~~~~~~~~ 370 (720)
||+.++|+||||.....+
T Consensus 282 ~t~~~il~h~~f~~~~~~ 299 (309)
T cd07845 282 ATAEEALESSYFKEKPLP 299 (309)
T ss_pred cCHHHHhcChhhccCCCC
Confidence 999999999999876443
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-29 Score=262.43 Aligned_cols=206 Identities=20% Similarity=0.274 Sum_probs=159.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..+|++++||||+++++. +..+. .++++||| .+++|.+++... ...+++..++.++.|++.||.|||++
T Consensus 45 ~~~~e~~~l~~~~~~~i~~~~~~-~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 120 (256)
T cd08220 45 AAQNECQVLKLLSHPNIIEYYEN-FLEDK---ALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK 120 (256)
T ss_pred HHHHHHHHHhhCCCCchhheeee-EecCC---EEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34467789999999999999994 43332 57999999 899999999543 44589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCC-ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||+|+||||+||+++.++ .++++|||.+...+...
T Consensus 121 ~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-------------------------------------------- 156 (256)
T cd08220 121 LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS-------------------------------------------- 156 (256)
T ss_pred CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc--------------------------------------------
Confidence 999999999999998554 57998888773321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......|++.|+|||.+.+..++.++|||||||
T Consensus 157 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~ 189 (256)
T cd08220 157 -----------------------------------------------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGC 189 (256)
T ss_pred -----------------------------------------------cccccccCCcccCchhccCCCCCcccchHHHHH
Confidence 000135788999999999888999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
++|+|++ ||............ .....++......+...+|+.+||+++|.+|||+.|+++||||
T Consensus 190 ~l~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 190 VLYELASLKRAFEAANLPALVLKI-MSGTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred HHHHHHhCCCCcccCchHHHHHHH-HhcCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 9999998 66655444333332 2222222222234556699999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.5e-30 Score=277.77 Aligned_cols=210 Identities=19% Similarity=0.208 Sum_probs=156.7
Q ss_pred eehhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
.+|..++..++||||+++++ ++.... .....|+||||.+++|.+++... +++..+..++.||+.||.|||++|
T Consensus 63 ~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~g 138 (353)
T cd07850 63 YRELVLMKLVNHKNIIGLLN-VFTPQKSLEEFQDVYLVMELMDANLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSAG 138 (353)
T ss_pred HHHHHHHHhcCCCCCcceee-eeccCCCccccCcEEEEEeccCCCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhCC
Confidence 36788999999999999999 443322 22357999999777999988432 899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+...+...
T Consensus 139 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---------------------------------------------- 172 (353)
T cd07850 139 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---------------------------------------------- 172 (353)
T ss_pred eeeCCCCHHHEEECCCCCEEEccCccceeCCCCC----------------------------------------------
Confidence 9999999999999999999999988873321100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+++.|+|||.+.+..++.++|||||||++
T Consensus 173 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l 207 (353)
T cd07850 173 ---------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM 207 (353)
T ss_pred ---------------------------------------------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHH
Confidence 00013568899999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCC--------------------------------Cccc--------cccCc-hH
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVL--------------------------------PPQL--------LLKFP-KE 337 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~--------------------------------p~~~--------~~~~p-~~ 337 (720)
|+|++ ||...+........+..... +... ....+ ..
T Consensus 208 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (353)
T cd07850 208 GEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQA 287 (353)
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHH
Confidence 99998 56544322111111100000 0000 00112 24
Q ss_pred HHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 338 ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 338 ~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
.+||.+||++||++|||+.|+|+||||.....
T Consensus 288 ~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~ 319 (353)
T cd07850 288 RDLLSKMLVIDPEKRISVDDALQHPYINVWYD 319 (353)
T ss_pred HHHHHHHcCCChhhCcCHHHHhcChhHhhccC
Confidence 59999999999999999999999999875433
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-29 Score=266.38 Aligned_cols=209 Identities=19% Similarity=0.254 Sum_probs=157.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++.+++||||+++++ ++..+. .+|+||||.+++|.+++......+++.+++.++.||+.||.|||+.||+
T Consensus 46 ~~~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 121 (286)
T cd07832 46 ALREIKALQACQHPYVVKLLD-VFPHGS---GFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIM 121 (286)
T ss_pred HHHHHHHHHhCCCCCCcceee-EEecCC---eeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 346777999999999999999 454433 6799999999999999966556699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++++|||.+........
T Consensus 122 H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------- 154 (286)
T cd07832 122 HRDLKPANLLISADGVLKIADFGLARLFSEEEP----------------------------------------------- 154 (286)
T ss_pred cCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-----------------------------------------------
Confidence 999999999999999999999988743211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~ 302 (720)
.......|+.+|+|||.+.+.. ++.++|||||||++|
T Consensus 155 ------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~ 192 (286)
T cd07832 155 ------------------------------------------RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFA 192 (286)
T ss_pred ------------------------------------------CccccccCcccccCceeeeccccCCchhHHHHHHHHHH
Confidence 0000135789999999987654 689999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC--------------------CCCc-------cc-cccCchHHHHHHHcCCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHR--------------------VLPP-------QL-LLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~--------------------~~p~-------~~-~~~~p~~~~li~~~L~~dP~~ 351 (720)
||++ +|............+... ..+. .. ........+|+.+||.++|.+
T Consensus 193 ~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 272 (286)
T cd07832 193 ELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSK 272 (286)
T ss_pred HHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhh
Confidence 9999 343333221111111100 0000 00 111233459999999999999
Q ss_pred CCChHHHHcCcccC
Q 004998 352 RPKMGELLQSEFLN 365 (720)
Q Consensus 352 Rpta~eiL~hp~~~ 365 (720)
|||++++|+||||.
T Consensus 273 R~~~~~~l~h~~~~ 286 (286)
T cd07832 273 RLSAAEALRHPYFT 286 (286)
T ss_pred CCCHHHHhhCcCcC
Confidence 99999999999984
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-30 Score=260.42 Aligned_cols=218 Identities=17% Similarity=0.234 Sum_probs=164.1
Q ss_pred eeeeehhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 62 LRKHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 62 ~r~~~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
-|..||..++.+ -.|+||++|++ ||+++. .||+|||- .||+|...|.+... +++.++..++++|+.||+|||.
T Consensus 120 ~RvfREVe~f~~Cqgh~nilqLie-fFEdd~---~FYLVfEKm~GGplLshI~~~~~-F~E~EAs~vvkdia~aLdFlH~ 194 (463)
T KOG0607|consen 120 SRVFREVETFYQCQGHKNILQLIE-FFEDDT---RFYLVFEKMRGGPLLSHIQKRKH-FNEREASRVVKDIASALDFLHT 194 (463)
T ss_pred HHHHHHHHHHHHhcCCccHHHHHH-Hhcccc---eEEEEEecccCchHHHHHHHhhh-ccHHHHHHHHHHHHHHHHHHhh
Confidence 355577777777 56999999999 887775 68999999 99999999955443 9999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCc---eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
+||.||||||+|||-...++ ||||||.+.+..... .|..++.+
T Consensus 195 kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~---------------------------------~~~spast- 240 (463)
T KOG0607|consen 195 KGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLN---------------------------------NDCSPAST- 240 (463)
T ss_pred cCcccccCCccceeecCCCCcCceeeeccccccccccC---------------------------------CCCCCCCC-
Confidence 99999999999999986654 788888665321000 11111100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CC--CCCcc
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GA--PVSCA 291 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~--~~s~~ 291 (720)
| .-...+|+..|||||+.. +. .|+.+
T Consensus 241 ------------------------------------------------P-~L~tPvGSAEfMAPEVVd~fv~qA~~YDKr 271 (463)
T KOG0607|consen 241 ------------------------------------------------P-ELLTPVGSAEFMAPEVVDVFVDQATFYDKR 271 (463)
T ss_pred ------------------------------------------------c-cccCcccchhhcchhHHhhhcccccccccc
Confidence 0 012368999999999863 22 38999
Q ss_pred ccchhhhhhhhhccccCCCCc------------h-----HHHHHHHhhcC--CCCccccccCchHH-HHHHHcCCCCCCC
Q 004998 292 SDIYRLGVLLFELFCPFSTGE------------E-----KTRTMSSLRHR--VLPPQLLLKFPKEA-SFCLWLLHPEPSG 351 (720)
Q Consensus 292 sDIwSLGvll~eLltpf~~~~------------~-----~~~~~~~l~~~--~~p~~~~~~~p~~~-~li~~~L~~dP~~ 351 (720)
.|.||||||||-||++|.++. + ....+..|..+ .+|..-+..++.++ +++..+|..+|.+
T Consensus 272 CDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~ 351 (463)
T KOG0607|consen 272 CDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQ 351 (463)
T ss_pred ccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHh
Confidence 999999999999999443321 0 12334445543 45666555555555 9999999999999
Q ss_pred CCChHHHHcCcccCCC
Q 004998 352 RPKMGELLQSEFLNEP 367 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~ 367 (720)
|.++.++++|||++..
T Consensus 352 rlsa~~vlnhPw~~~~ 367 (463)
T KOG0607|consen 352 RLSAAQVLNHPWVQRC 367 (463)
T ss_pred hhhhhhccCCcccccc
Confidence 9999999999999986
|
|
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-29 Score=266.28 Aligned_cols=208 Identities=18% Similarity=0.243 Sum_probs=156.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++++++||||+++++ ++.+.. ..+++|||..++|..++.. ....+++..++.++.||+.||+|||+.|
T Consensus 45 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (284)
T cd07860 45 TAIREISLLKELNHPNIVKLLD-VIHTEN---KLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR 120 (284)
T ss_pred HHHHHHHHHHhcCCCCCcchhh-hcccCC---cEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3446788999999999999999 444433 5799999966789999843 3455899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++|+|||.+...+....
T Consensus 121 i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~--------------------------------------------- 155 (284)
T cd07860 121 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--------------------------------------------- 155 (284)
T ss_pred eecCCCCHHHEEECCCCCEEEeeccchhhcccCcc---------------------------------------------
Confidence 99999999999999999999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvl 300 (720)
......+++.|+|||++.+.. ++.++|||||||+
T Consensus 156 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i 190 (284)
T cd07860 156 ---------------------------------------------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 190 (284)
T ss_pred ---------------------------------------------ccccccccccccCCeEEecCCCCCcHHHHHHHHHH
Confidence 000124688999999987755 6889999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCc--------------------------c-ccccCchHHHHHHHcCCCCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPP--------------------------Q-LLLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~--------------------------~-~~~~~p~~~~li~~~L~~dP~ 350 (720)
+|||++ ||............+.....++ . .....+...+||.+||+.||.
T Consensus 191 l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 270 (284)
T cd07860 191 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPN 270 (284)
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcc
Confidence 999999 5655443322222221111100 0 011223445899999999999
Q ss_pred CCCChHHHHcCccc
Q 004998 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+|||+++++.||||
T Consensus 271 ~Rpt~~~~l~~~~f 284 (284)
T cd07860 271 KRISAKAALAHPFF 284 (284)
T ss_pred cCCCHHHHhcCCCC
Confidence 99999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.1e-30 Score=280.00 Aligned_cols=204 Identities=15% Similarity=0.181 Sum_probs=154.5
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------------------
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------------------- 115 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------------------------- 115 (720)
.+|..+|..+ +|||||++++ .+.... ..++|||| .||+|.+++....
T Consensus 86 ~~Ei~il~~l~~HpnIv~l~~-~~~~~~---~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (375)
T cd05104 86 MSELKVLSYLGNHINIVNLLG-ACTVGG---PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMS 161 (375)
T ss_pred HHHHHHHHHhcCCcceeeeee-eeccCC---cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhccc
Confidence 3678889888 8999999999 554443 57999999 9999999994321
Q ss_pred -----------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Q 004998 116 -----------------------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 116 -----------------------------------------------~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
..+++..++.++.||+.||.|||++||+|||||
T Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk 241 (375)
T cd05104 162 CDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLA 241 (375)
T ss_pred chhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCc
Confidence 247888999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccC
Q 004998 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+|||++.++.+||+|||++....... .+
T Consensus 242 p~Nill~~~~~~kl~DfG~a~~~~~~~---------------------------------~~------------------ 270 (375)
T cd05104 242 ARNILLTHGRITKICDFGLARDIRNDS---------------------------------NY------------------ 270 (375)
T ss_pred hhhEEEECCCcEEEecCccceeccCcc---------------------------------cc------------------
Confidence 999999999999999998874321110 00
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc--
Q 004998 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt-- 306 (720)
. ......++..|+|||++.+..++.++|||||||++|||++
T Consensus 271 ------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g 313 (375)
T cd05104 271 ------------------V-------------------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLG 313 (375)
T ss_pred ------------------c-------------------ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcC
Confidence 0 0000234677999999999889999999999999999997
Q ss_pred --cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 307 --PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 307 --pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||............+..+..+.......++..+|+.+||+.||++||++.||++
T Consensus 314 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~ 369 (375)
T cd05104 314 SSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQ 369 (375)
T ss_pred CCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 565543333344444433222221112234569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-29 Score=266.18 Aligned_cols=206 Identities=18% Similarity=0.185 Sum_probs=157.9
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+|.+++||||+++++ .+.... .++++||| .+++|..+. .+++..+..++.||+.||.|||+.||+|
T Consensus 48 ~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H 118 (279)
T cd06619 48 SELEILYKCDSPYIIGFYG-AFFVEN---RISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSLKILH 118 (279)
T ss_pred HHHHHHHhCCCCCeeeEEE-EEEECC---EEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 5677899999999999999 554443 57899999 888887643 3789999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
+||||+||+++.++.++|+|||++......
T Consensus 119 ~dlkp~Nill~~~~~~~l~dfg~~~~~~~~-------------------------------------------------- 148 (279)
T cd06619 119 RDVKPSNMLVNTRGQVKLCDFGVSTQLVNS-------------------------------------------------- 148 (279)
T ss_pred CCCCHHHEEECCCCCEEEeeCCcceecccc--------------------------------------------------
Confidence 999999999999999999999887322100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
......||+.|+|||.+.+..++.++|||||||++|+|
T Consensus 149 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l 186 (279)
T cd06619 149 ------------------------------------------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMEL 186 (279)
T ss_pred ------------------------------------------cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHH
Confidence 00013678999999999988899999999999999999
Q ss_pred cc---cCCCCch------HHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccchH
Q 004998 305 FC---PFSTGEE------KTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 305 lt---pf~~~~~------~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
++ ||..... .......+.....+..... ..+...+|+.+||+.+|.+||+++|+++||||........
T Consensus 187 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~~~~ 264 (279)
T cd06619 187 ALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDGNA 264 (279)
T ss_pred HhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccccCccH
Confidence 99 5543211 1112222222222221122 2345569999999999999999999999999988744433
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=264.76 Aligned_cols=207 Identities=19% Similarity=0.218 Sum_probs=155.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCC--CHHHHHHHHHHHHHHHHHHHHc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSV--DVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l--~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..+|..++.+++||||+++++ ++..+ ..+++++|| .+++|.+++......+ ++..+..++.||+.||.|||++
T Consensus 52 ~~~e~~~l~~l~h~~iv~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 127 (268)
T cd06624 52 LHEEIALHSYLKHRNIVQYLG-SDSEN---GFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN 127 (268)
T ss_pred HHHHHHHHHhcCCCCeeeeee-eeccC---CEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC
Confidence 346778899999999999999 44443 268999999 8999999996543445 8899999999999999999999
Q ss_pred CceeccCCCCcEEEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 141 GIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||+||||||+||+++. .+.++|+|||.+........
T Consensus 128 ~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~------------------------------------------- 164 (268)
T cd06624 128 QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP------------------------------------------- 164 (268)
T ss_pred CEeecCCCHHHEEEcCCCCeEEEecchhheecccCCC-------------------------------------------
Confidence 9999999999999975 67899999887733211000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC--CCccccchhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRL 297 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwSL 297 (720)
......|++.|+|||.+.+.. ++.++|||||
T Consensus 165 -----------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~sl 197 (268)
T cd06624 165 -----------------------------------------------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSL 197 (268)
T ss_pred -----------------------------------------------ccccCCCCccccChhhhccccccCCchhhhHHH
Confidence 000124688999999987654 7899999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
||++|+|++ ||...................+.++... +...+|+.+||+++|.+|||+.|++.||||
T Consensus 198 Gvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 198 GCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred HHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 999999999 5543322212221111111122222223 345599999999999999999999999997
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-29 Score=266.25 Aligned_cols=203 Identities=20% Similarity=0.249 Sum_probs=157.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFR 128 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i~~ 128 (720)
.+|..++.+++||||+++++ ++.... ..|++||| .+++|.+++.... ..+++.+++.++.
T Consensus 56 ~~ei~~l~~l~h~~i~~~~~-~~~~~~---~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 131 (283)
T cd05048 56 RQEAELMSDLQHPNIVCLLG-VCTKEQ---PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAI 131 (283)
T ss_pred HHHHHHHHhcCCcccceEEE-EEcCCC---ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHH
Confidence 46777899999999999999 554432 57999999 8999999994321 3488999999999
Q ss_pred HHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccc
Q 004998 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus 132 ~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~---------------------------------- 177 (283)
T cd05048 132 QIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSA---------------------------------- 177 (283)
T ss_pred HHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeecccc----------------------------------
Confidence 9999999999999999999999999999999999999887432110
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC
Q 004998 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 288 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 288 (720)
+. .. ......+++.|+|||.+.+..+
T Consensus 178 ~~----------------------------------~~--------------------~~~~~~~~~~y~aPE~~~~~~~ 203 (283)
T cd05048 178 DY----------------------------------YR--------------------VQSKSLLPVRWMPPEAILYGKF 203 (283)
T ss_pred cc----------------------------------cc--------------------ccCCCcccccccCHHHhccCcC
Confidence 00 00 0001356788999999988889
Q ss_pred Cccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 289 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 289 s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+.++|||||||++|||++ ||...... ..+..+..+..++......+...+|+.+||..||.+||++.||++
T Consensus 204 ~~~sDv~slG~il~el~~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~ 278 (283)
T cd05048 204 TTESDIWSFGVVLWEIFSYGLQPYYGFSNQ-EVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHT 278 (283)
T ss_pred chhhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 999999999999999997 66554433 445555555444433333345559999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-29 Score=266.38 Aligned_cols=209 Identities=15% Similarity=0.148 Sum_probs=156.0
Q ss_pred ehhhhcccC-CCCCceecccceeecCC-CCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEA-AIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~-~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.|..++.++ +||||+++++.+...+. ....+|++||| .|++|.++++. ....+++..++.++.||+.||.|||+
T Consensus 67 ~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~ 146 (291)
T cd06639 67 AEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN 146 (291)
T ss_pred HHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 566677777 89999999994443322 23468999999 89999998842 34458999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
.||+||||||+||+++.++.++|+|||.+....... .
T Consensus 147 ~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~----------------------------------~--------- 183 (291)
T cd06639 147 NRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR----------------------------------L--------- 183 (291)
T ss_pred CCeeccCCCHHHEEEcCCCCEEEeecccchhccccc----------------------------------c---------
Confidence 999999999999999999999999998874321110 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-----CCccccc
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-----VSCASDI 294 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-----~s~~sDI 294 (720)
......|+..|+|||.+.... ++.++||
T Consensus 184 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di 216 (291)
T cd06639 184 -----------------------------------------------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDV 216 (291)
T ss_pred -----------------------------------------------cccCccCCccccChhhhcCCCCcccccCCccch
Confidence 000135788999999986432 6889999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCcc-ccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ-LLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~-~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
|||||++|||++ ||.......... .+.....+.. ....+ +...+||.+||+++|++||++.|+++||||+
T Consensus 217 ~slGvi~~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 217 WSLGITAIELGDGDPPLFDMHPVKTLF-KIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred HHHHHHHHHHhhCCCCCCCCcHHHHHH-HHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 999999999999 555443332222 2322222111 11122 3445999999999999999999999999984
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-30 Score=293.76 Aligned_cols=209 Identities=20% Similarity=0.256 Sum_probs=154.5
Q ss_pred ehhhhcccCC-CCCceecccceee-c-CCC-CCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGD-HLRNQGGLSGVCE-N-EAA-IDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 66 ~e~~~Ls~l~-HpnIV~l~~~~~~-~-~~~-~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+|+.+|+.|. |||||.|++.... . ... ...++|.||| .|+.|-++|++ -...|++.++++||+|+++||.+||.
T Consensus 83 ~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~ 162 (738)
T KOG1989|consen 83 REIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY 162 (738)
T ss_pred HHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 6777899988 9999999993332 2 222 4578999999 66899999942 23349999999999999999999999
Q ss_pred cC--ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 140 QG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 140 ~g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
.. |||||||-|||||+.+|+.||||||.++..-.... ..+++.
T Consensus 163 ~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~-----------------~~~e~~------------------ 207 (738)
T KOG1989|consen 163 LKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPT-----------------SAQEVN------------------ 207 (738)
T ss_pred CCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCc-----------------cHHHHH------------------
Confidence 87 99999999999999999999999998843211100 000000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccc---cCCCCCccccc
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL---AGAPVSCASDI 294 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l---~~~~~s~~sDI 294 (720)
...++ ....-|+.|+|||++ .+.+++.|+||
T Consensus 208 ------------------------------------~ve~e----------I~k~TTp~YRsPEMIDlysg~pI~eKsDI 241 (738)
T KOG1989|consen 208 ------------------------------------YVEEE----------IEKYTTPQYRSPEMIDLYSGLPIGEKSDI 241 (738)
T ss_pred ------------------------------------HHHHH----------HHhhCCccccChHHHhhhcCCCCcchhHH
Confidence 00000 112349999999987 56679999999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhcCCC-CccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~-p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|||+||-|+. ||...... .|.++.+ -|.+...+....+||..||++||.+||++-+++.
T Consensus 242 WALGclLYkLCy~t~PFe~sg~l-----aIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~ 306 (738)
T KOG1989|consen 242 WALGCLLYKLCYFTTPFEESGKL-----AILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLE 306 (738)
T ss_pred HHHHHHHHHHHHhCCCcCcCcce-----eEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHH
Confidence 999999999987 88775332 1223222 2222344445569999999999999999999986
|
|
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-29 Score=266.56 Aligned_cols=206 Identities=17% Similarity=0.203 Sum_probs=161.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
...|..++..++||||+++++ ++.+.. ..|++|||..++|.+++.....++++.+++.++.||+.||.|||++||+
T Consensus 68 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~ 143 (313)
T cd06633 68 IIKEVKFLQQLKHPNTIEYKG-CYLKEH---TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMI 143 (313)
T ss_pred HHHHHHHHHhCCCCCCccEEE-EEEeCC---EEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 346778999999999999999 554443 5799999966789998866556699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+......
T Consensus 144 H~dl~p~nili~~~~~~kL~dfg~~~~~~~~------------------------------------------------- 174 (313)
T cd06633 144 HRDIKAGNILLTEPGQVKLADFGSASKSSPA------------------------------------------------- 174 (313)
T ss_pred cCCCChhhEEECCCCCEEEeecCCCcccCCC-------------------------------------------------
Confidence 9999999999999999999988876211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CCCCCccccchhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGvl 300 (720)
....|+..|+|||++. ...++.++|||||||+
T Consensus 175 ---------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvi 209 (313)
T cd06633 175 ---------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 209 (313)
T ss_pred ---------------------------------------------CCccccccccChhhccccCCCCCCchhhHHHHHHH
Confidence 0135788999999984 3458899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|+|++ ||.......... .+.....+......++ ...+|+.+||+++|.+||++.+++.||||....
T Consensus 210 l~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 210 CIELAERKPPLFNMNAMSALY-HIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred HHHHHhCCCCCCCCChHHHHH-HHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 999998 555544333332 2333333333333344 356999999999999999999999999999753
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-29 Score=271.51 Aligned_cols=205 Identities=20% Similarity=0.204 Sum_probs=156.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gI 142 (720)
.+|..++.+++||||+++++ .+..+. .+|++||| .|++|.+++.+. ..+++..+..++.||+.||.|||+ .+|
T Consensus 47 ~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i 121 (308)
T cd06615 47 IRELKVLHECNSPYIVGFYG-AFYSDG---EISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHKI 121 (308)
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEeeCC---EEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCE
Confidence 36788999999999999999 554443 67999999 899999999654 448999999999999999999997 699
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+|||++.++.++|+|||.+......
T Consensus 122 ~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~------------------------------------------------ 153 (308)
T cd06615 122 MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS------------------------------------------------ 153 (308)
T ss_pred EECCCChHHEEEecCCcEEEccCCCccccccc------------------------------------------------
Confidence 99999999999999999999988876221000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......|++.|+|||.+.+..++.++|||||||++|
T Consensus 154 --------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~ 189 (308)
T cd06615 154 --------------------------------------------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLV 189 (308)
T ss_pred --------------------------------------------ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHH
Confidence 000136788999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC-----------------------------------CCCccccc--cCchHHHHHH
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHR-----------------------------------VLPPQLLL--KFPKEASFCL 342 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~-----------------------------------~~p~~~~~--~~p~~~~li~ 342 (720)
+|++ ||...... .....+... ..++..+. ..+...+|+.
T Consensus 190 ~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 268 (308)
T cd06615 190 EMAIGRYPIPPPDAK-ELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVD 268 (308)
T ss_pred HHHhCCCCCCCcchh-hHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHH
Confidence 9999 55433211 111111100 00111110 1234569999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCC
Q 004998 343 WLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+||..+|++|||+.++++||||...
T Consensus 269 ~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 269 KCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred HHccCChhhCcCHHHHhcChhhhhc
Confidence 9999999999999999999999764
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-30 Score=280.41 Aligned_cols=193 Identities=22% Similarity=0.247 Sum_probs=151.9
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccC
Q 004998 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
..+..-+||||+++.+ ++.++. ++|+|||+ .|+-|.+.+.... ....++..|++||+.||.|||++|||||||
T Consensus 368 ~~~~~~~h~niv~~~~-v~~~~~---~~~~v~e~l~g~ell~ri~~~~--~~~~e~~~w~~~lv~Av~~LH~~gvvhRDL 441 (612)
T KOG0603|consen 368 ISLLVRDHPNIVKSHD-VYEDGK---EIYLVMELLDGGELLRRIRSKP--EFCSEASQWAAELVSAVDYLHEQGVVHRDL 441 (612)
T ss_pred hhhhhcCCCcceeecc-eecCCc---eeeeeehhccccHHHHHHHhcc--hhHHHHHHHHHHHHHHHHHHHhcCeeecCC
Confidence 3455578999999999 676665 57999999 7777766664433 223788899999999999999999999999
Q ss_pred CCCcEEE-ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccc
Q 004998 148 RPSCFVM-SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 226 (720)
Q Consensus 148 KP~NILl-~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~ 226 (720)
||+|||+ ...++++|+|||.++..... +
T Consensus 442 kp~NIL~~~~~g~lrltyFG~a~~~~~~--------------------------------------------------~- 470 (612)
T KOG0603|consen 442 KPGNILLDGSAGHLRLTYFGFWSELERS--------------------------------------------------C- 470 (612)
T ss_pred ChhheeecCCCCcEEEEEechhhhCchh--------------------------------------------------h-
Confidence 9999999 58999999999988432111 0
Q ss_pred cCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc
Q 004998 227 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 227 q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt 306 (720)
...+=|..|.|||++....|+.++||||||++||+||+
T Consensus 471 ------------------------------------------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~ 508 (612)
T KOG0603|consen 471 ------------------------------------------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLT 508 (612)
T ss_pred ------------------------------------------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHh
Confidence 00133788999999998889999999999999999999
Q ss_pred ---cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 307 ---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 307 ---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
||........++..+ .++.+....+..+ +|+.+||++||.+||++.+++.||||
T Consensus 509 G~tp~~~~P~~~ei~~~i----~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 509 GRTLFAAHPAGIEIHTRI----QMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred CCCccccCCchHHHHHhh----cCCccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 555444433444444 4444444445554 99999999999999999999999999
|
|
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=267.06 Aligned_cols=201 Identities=18% Similarity=0.224 Sum_probs=152.6
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Q 004998 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 70 ~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
++...+||||+.+++ .+..+. .+++|||| .|++|.+++...+ .+++..+..++.||+.||.|||++||+|||||
T Consensus 50 ~~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~~ivH~dik 124 (279)
T cd05633 50 LVSTGDCPFIVCMTY-AFHTPD---KLCFILDLMNGGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMHNRFVVYRDLK 124 (279)
T ss_pred HHhhCCCCcEeEEEE-EEecCC---eEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCC
Confidence 444568999999998 554433 57999999 9999999995544 49999999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccC
Q 004998 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+|||++.++.++++|||++...+...
T Consensus 125 p~Nil~~~~~~~~l~dfg~~~~~~~~~----------------------------------------------------- 151 (279)
T cd05633 125 PANILLDEHGHVRISDLGLACDFSKKK----------------------------------------------------- 151 (279)
T ss_pred HHHEEECCCCCEEEccCCcceeccccC-----------------------------------------------------
Confidence 999999999999999998873221000
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhhhhccc-
Q 004998 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~eLlt- 306 (720)
.....||+.|+|||.+.+ ..++.++|||||||++|||++
T Consensus 152 ---------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g 192 (279)
T cd05633 152 ---------------------------------------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRG 192 (279)
T ss_pred ---------------------------------------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhC
Confidence 001257899999999864 458999999999999999999
Q ss_pred --cCCCCchHH-HHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCCc
Q 004998 307 --PFSTGEEKT-RTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 368 (720)
Q Consensus 307 --pf~~~~~~~-~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~~ 368 (720)
||....... ....... ...+..++... +...+|+.+||+.||++|| ++.|+++||||+...
T Consensus 193 ~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~ 262 (279)
T cd05633 193 HSPFRQHKTKDKHEIDRMT-LTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID 262 (279)
T ss_pred CCCcCCCCCcCHHHHHHHh-hcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence 664332111 1111111 11222222233 4556999999999999999 699999999999863
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=262.36 Aligned_cols=211 Identities=18% Similarity=0.178 Sum_probs=158.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+.++|..++.+++||||+++++ ++.+.. ...++++||| .|++|.+++.+.. .+++..++.++.||+.||.|||++|
T Consensus 50 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~ 126 (265)
T cd06652 50 ALECEIQLLKNLLHERIVQYYG-CLRDPM-ERTLSIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEGVSYLHSNM 126 (265)
T ss_pred HHHHHHHHHHhcCCCCeeeEEe-EeccCC-CceEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446788999999999999999 443332 2357899999 8999999996543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+||+++.++.++|+|||.+......... .-
T Consensus 127 i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~-------------------------------~~----------- 164 (265)
T cd06652 127 IVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLS-------------------------------GT----------- 164 (265)
T ss_pred EecCCCCHHHEEecCCCCEEECcCcccccccccccc-------------------------------cc-----------
Confidence 999999999999999999999999877432110000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||++.+..++.++|||||||++
T Consensus 165 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 199 (265)
T cd06652 165 ---------------------------------------------GMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTV 199 (265)
T ss_pred ---------------------------------------------ccccCCCCccccChhhhcCCCCCcchhHHHHHHHH
Confidence 00013578899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
|||++ ||........... +......+..+...+ ...+++.+|| .+|+.||+++|+++|||+.
T Consensus 200 ~el~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 200 VEMLTEKPPWAEFEAMAAIFK-IATQPTNPVLPPHVSDHCRDFLKRIF-VEAKLRPSADELLRHTFVH 265 (265)
T ss_pred HHHhhCCCCCCccchHHHHHH-HhcCCCCCCCchhhCHHHHHHHHHHh-cChhhCCCHHHHhcCcccC
Confidence 99999 5544433333222 222222222222333 3458999999 4999999999999999984
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-29 Score=260.77 Aligned_cols=206 Identities=21% Similarity=0.195 Sum_probs=159.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+++.++||||+++++ ++..+. .+|++||| .+++|.+++.+.. .+++..+..++.||+.||.|||+.|
T Consensus 48 ~~~~e~~~l~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~ 122 (258)
T cd06632 48 QLEQEIALLSKLQHPNIVQYLG-TEREED---NLYIFLELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLHDRN 122 (258)
T ss_pred HHHHHHHHHHhcCCCCchheee-eEecCC---eEEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447778999999999999999 444443 67999999 8999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.+||+|||.+.......
T Consensus 123 i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~---------------------------------------------- 156 (258)
T cd06632 123 TVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS---------------------------------------------- 156 (258)
T ss_pred cccCCCCHHHEEECCCCCEEEccCccceeccccc----------------------------------------------
Confidence 9999999999999999999999988763221100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvl 300 (720)
......|++.|+|||.+.... ++.++|+|||||+
T Consensus 157 ---------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~ 191 (258)
T cd06632 157 ---------------------------------------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCT 191 (258)
T ss_pred ---------------------------------------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHH
Confidence 000135788999999997776 8999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|+|++ ||..................+.......+...+|+.+||+.+|.+||++.+++.|||+
T Consensus 192 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 192 VLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred HHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 999999 6655443322222222122222222223455699999999999999999999999996
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.1e-30 Score=267.16 Aligned_cols=204 Identities=25% Similarity=0.363 Sum_probs=157.2
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..++.+++||||+++++ ++.+.. .++++||+ .+++|.++|.+ ...+++.+++.++.||+.||.+||+.||+|
T Consensus 47 ~e~~~~~~l~~~~i~~~~~-~~~~~~---~~~~v~~~~~~~~L~~~l~~-~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H 121 (260)
T PF00069_consen 47 REIKILRRLRHPNIVQILD-VFQDDN---YLYIVMEYCPGGSLQDYLQK-NKPLSEEEILKIAYQILEALAYLHSKGIVH 121 (260)
T ss_dssp HHHHHHHHHTBTTBCHEEE-EEEESS---EEEEEEEEETTEBHHHHHHH-HSSBBHHHHHHHHHHHHHHHHHHHHTTEEE
T ss_pred hhhhccccccccccccccc-cccccc---cccccccccccccccccccc-cccccccccccccccccccccccccccccc
Confidence 4778899999999999999 554432 57899999 77799999963 334899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
+||||+||+++.++.++|+|||.+...... .
T Consensus 122 ~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~-----------------------------------~-------------- 152 (260)
T PF00069_consen 122 RDIKPENILLDENGEVKLIDFGSSVKLSEN-----------------------------------N-------------- 152 (260)
T ss_dssp SSBSGGGEEESTTSEEEESSGTTTEESTST-----------------------------------T--------------
T ss_pred cccccccccccccccccccccccccccccc-----------------------------------c--------------
Confidence 999999999999999999999887321000 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-CCCCCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~s~~sDIwSLGvll~e 303 (720)
.......+++.|+|||++. +..++.++||||||+++|+
T Consensus 153 -----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~ 191 (260)
T PF00069_consen 153 -----------------------------------------ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYE 191 (260)
T ss_dssp -----------------------------------------SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHH
T ss_pred -----------------------------------------ccccccccccccccccccccccccccccccccccccccc
Confidence 0001146799999999998 7779999999999999999
Q ss_pred ccc---cCCCCc--hHHHHHHHhhcCCCCcccccc---CchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 304 LFC---PFSTGE--EKTRTMSSLRHRVLPPQLLLK---FPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 304 Llt---pf~~~~--~~~~~~~~l~~~~~p~~~~~~---~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|++ ||.... ..............+...... .+...+++.+||+.||++||++.++++||||
T Consensus 192 l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 192 LLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred ccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 999 666541 122222222221111111111 1455699999999999999999999999997
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-29 Score=268.21 Aligned_cols=208 Identities=15% Similarity=0.190 Sum_probs=161.6
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..+++.++||||+++++ .+.... .+|+++|| .+++|.+++... .+++.++..++.||+.||.|||++|++
T Consensus 64 ~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~~i~ 137 (296)
T cd06655 64 INEILVMKELKNPNIVNFLD-SFLVGD---ELFVVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHANQVI 137 (296)
T ss_pred HHHHHHHHhcCCCceeeeee-eEecCc---eEEEEEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 35777899999999999999 454433 67999999 899999998543 389999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........
T Consensus 138 H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~----------------------------------------------- 170 (296)
T cd06655 138 HRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS----------------------------------------------- 170 (296)
T ss_pred cCCCCHHHEEECCCCCEEEccCccchhcccccc-----------------------------------------------
Confidence 999999999999999999999987743211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......|++.|+|||.+.+..++.++|||||||++|+
T Consensus 171 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~ 207 (296)
T cd06655 171 -------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 207 (296)
T ss_pred -------------------------------------------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHH
Confidence 0001357889999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|++ ||..................+....... +...+|+.+||..||.+||++.++++||||....
T Consensus 208 lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 208 MVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred HHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 999 6665544333222222221111122223 3455999999999999999999999999998753
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-29 Score=266.23 Aligned_cols=210 Identities=16% Similarity=0.193 Sum_probs=156.6
Q ss_pred eeehhhhcccC-CCCCceecccceeecC--CCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENE--AAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~--~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.+.|..++.++ +||||+++++.++... .....+|++||| .+++|.+++.. ....+++..++.++.||+.||.|||
T Consensus 59 ~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH 138 (282)
T cd06636 59 IKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH 138 (282)
T ss_pred HHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34566677777 7999999999444322 223478999999 88899999943 3345889999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+|+||||+||+++.++.++|+|||.+........
T Consensus 139 ~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~------------------------------------------ 176 (282)
T cd06636 139 AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG------------------------------------------ 176 (282)
T ss_pred HCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhcccc------------------------------------------
Confidence 99999999999999999999999999887732210000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-----CCCCCcccc
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASD 293 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sD 293 (720)
......|++.|+|||++. +..++.++|
T Consensus 177 ------------------------------------------------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~D 208 (282)
T cd06636 177 ------------------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDYRSD 208 (282)
T ss_pred ------------------------------------------------CCCcccccccccCHhhcCcccCcCcCCCcccc
Confidence 000136789999999986 334888999
Q ss_pred chhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
||||||++|||++ ||.......... .+.....+......++ ...+||.+||+.||.+||++.|||+||||
T Consensus 209 vwslG~~l~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 209 IWSLGITAIEMAEGAPPLCDMHPMRALF-LIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred hhHHHHHHHHHHhCCCCccccCHHhhhh-hHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 9999999999999 554433322222 2222222222222334 44699999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-29 Score=260.43 Aligned_cols=207 Identities=19% Similarity=0.250 Sum_probs=163.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..++++++||||+++++ ++.... ..+++||| .+++|.+++.+. ...+++..+..++.|++.||.|||+.
T Consensus 45 ~~~~e~~~l~~~~h~~i~~~~~-~~~~~~---~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (256)
T cd08221 45 DALNEIVILSLLQHPNIIAYYN-HFMDDN---TLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA 120 (256)
T ss_pred HHHHHHHHHHhCCCCCeeEEEe-EEecCC---eEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3447788999999999999999 444432 57999999 899999999543 45589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|++|+||||+||+++.++.+|++|||.+........
T Consensus 121 ~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~-------------------------------------------- 156 (256)
T cd08221 121 GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS-------------------------------------------- 156 (256)
T ss_pred CccccCCChHhEEEeCCCCEEECcCcceEEcccccc--------------------------------------------
Confidence 999999999999999999999999887733211100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......|++.|+|||.+.+..++.++|||||||+
T Consensus 157 ----------------------------------------------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i 190 (256)
T cd08221 157 ----------------------------------------------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCV 190 (256)
T ss_pred ----------------------------------------------cccccCCCccccCHhhcCCCCCCCcchhHHHHHH
Confidence 0001357899999999988888999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|||++ ||...... .....+..+.+++.......+..+|+.+||+++|.+||++.++|+|||+
T Consensus 191 ~~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 191 LYELLTLKRTFDATNPL-NLVVKIVQGNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 999999 55544333 3444444444444433334455699999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-29 Score=267.03 Aligned_cols=206 Identities=16% Similarity=0.270 Sum_probs=154.6
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..++++++||||+++++ ++.+.. ..|+||||.+++|.+++......+++..++.++.||+.||.|||++||+|
T Consensus 51 ~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H 126 (291)
T cd07844 51 IREASLLKDLKHANIVTLHD-IIHTKK---TLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLH 126 (291)
T ss_pred HHHHHHHhhCCCcceeeEEE-EEecCC---eEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 36888999999999999999 554443 67999999667999999665556899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.++|+|||.+.....+..
T Consensus 127 ~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~------------------------------------------------ 158 (291)
T cd07844 127 RDLKPQNLLISERGELKLADFGLARAKSVPSK------------------------------------------------ 158 (291)
T ss_pred ccCCHHHEEEcCCCCEEECccccccccCCCCc------------------------------------------------
Confidence 99999999999999999999887732211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||++.+. .++.++|||||||++|+
T Consensus 159 ------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~ 196 (291)
T cd07844 159 ------------------------------------------TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYE 196 (291)
T ss_pred ------------------------------------------cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHH
Confidence 00002457889999998764 48899999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc---CC---------------------C-Cccc----ccc--CchHHHHHHHcCCCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRH---RV---------------------L-PPQL----LLK--FPKEASFCLWLLHPEP 349 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~---~~---------------------~-p~~~----~~~--~p~~~~li~~~L~~dP 349 (720)
|++ ||............+.. .. . +..+ ... .+...+|+.+||+++|
T Consensus 197 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p 276 (291)
T cd07844 197 MATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEP 276 (291)
T ss_pred HHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCc
Confidence 998 55443322111111100 00 0 0000 011 1445599999999999
Q ss_pred CCCCChHHHHcCccc
Q 004998 350 SGRPKMGELLQSEFL 364 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~ 364 (720)
.+|||+.++|+||||
T Consensus 277 ~~Rps~~e~l~~~~f 291 (291)
T cd07844 277 KKRISAAEAMKHPYF 291 (291)
T ss_pred ccccCHHHHhcCCCC
Confidence 999999999999998
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-30 Score=265.28 Aligned_cols=207 Identities=19% Similarity=0.218 Sum_probs=161.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gI 142 (720)
.+|..++++++||||+++++ .+... ..+++++|| .+++|.+++......+++..+..++.||+.||.|||+ .|+
T Consensus 47 ~~e~~~l~~~~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i 122 (265)
T cd06605 47 LRELDILHKCNSPYIVGFYG-AFYNN---GDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKI 122 (265)
T ss_pred HHHHHHHHHCCCCchhhhhe-eeecC---CEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCe
Confidence 36777889999999999999 44444 368999999 7799999996554569999999999999999999999 999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+.......
T Consensus 123 ~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~----------------------------------------------- 155 (265)
T cd06605 123 IHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL----------------------------------------------- 155 (265)
T ss_pred ecCCCCHHHEEECCCCCEEEeecccchhhHHHH-----------------------------------------------
Confidence 999999999999999999999998763210000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
. ....++..|+|||.+.+..++.++|||||||++|
T Consensus 156 --------------------------------------------~-~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~ 190 (265)
T cd06605 156 --------------------------------------------A-KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLI 190 (265)
T ss_pred --------------------------------------------h-hcccCChhccCHHHHcCCCCCchhhHHHHHHHHH
Confidence 0 0035688899999999888999999999999999
Q ss_pred hccc---cCCCCc----hHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGE----EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~----~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|++ ||.... .....+..+.....+..... ..+...+||.+||..||.+|||+.+++.||||+..
T Consensus 191 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~ 263 (265)
T cd06605 191 ELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY 263 (265)
T ss_pred HHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence 9999 555431 22223333333222222222 23345699999999999999999999999999865
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=264.50 Aligned_cols=207 Identities=19% Similarity=0.251 Sum_probs=163.3
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+++.++||||+++++ .+.++ ..+|+++|| .+++|.+++... .+++..++.++.||+.||.|||++||+
T Consensus 47 ~~e~~~l~~l~h~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i~ 120 (274)
T cd06609 47 QQEIQFLSQCRSPYITKYYG-SFLKG---SKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGKI 120 (274)
T ss_pred HHHHHHHHHcCCCCeeeeeE-EEEEC---CeEEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 46777899999999999999 44444 368999999 899999999654 589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||+|+||+++.++.++|+|||.+...+....
T Consensus 121 h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~----------------------------------------------- 153 (274)
T cd06609 121 HRDIKAANILLSEEGDVKLADFGVSGQLTSTMS----------------------------------------------- 153 (274)
T ss_pred cCCCCHHHEEECCCCCEEEcccccceeeccccc-----------------------------------------------
Confidence 999999999999999999999888743321100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......|++.|+|||.+.+..++.++|||||||++|+
T Consensus 154 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~ 190 (274)
T cd06609 154 -------------------------------------------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIE 190 (274)
T ss_pred -------------------------------------------ccccccCCccccChhhhccCCCCchhhHHHHHHHHHH
Confidence 0011357889999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCcccccc-C-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-F-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|++ ||...... .....+.... ++.+... . +...+++.+||..+|++|||++++++||||.....
T Consensus 191 l~tg~~p~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 259 (274)
T cd06609 191 LAKGEPPLSDLHPM-RVLFLIPKNN-PPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKK 259 (274)
T ss_pred HHhCCCCcccCchH-HHHHHhhhcC-CCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCc
Confidence 999 55443332 2223333332 2222222 3 44569999999999999999999999999988644
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=264.65 Aligned_cols=208 Identities=15% Similarity=0.154 Sum_probs=155.2
Q ss_pred ehhhhcccC-CCCCceecccceeecC-CCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENE-AAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~-~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.|..++..+ +||||+++++.++... .....++++||| .|++|.+++.. ....+++..+..++.||+.||.|||+
T Consensus 63 ~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~ 142 (286)
T cd06638 63 AEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV 142 (286)
T ss_pred HHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh
Confidence 566678888 7999999999444322 233468999999 89999998842 33458999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
++|+||||||+||+++.++.++++|||.+....... .
T Consensus 143 ~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~----------------------------------~--------- 179 (286)
T cd06638 143 NKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR----------------------------------L--------- 179 (286)
T ss_pred CCccccCCCHHhEEECCCCCEEEccCCceeecccCC----------------------------------C---------
Confidence 999999999999999999999999988873321000 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----CCCCccccc
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCASDI 294 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~sDI 294 (720)
......|++.|+|||++.. ..++.++||
T Consensus 180 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv 212 (286)
T cd06638 180 -----------------------------------------------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDV 212 (286)
T ss_pred -----------------------------------------------ccccccCCCcccChhhhchhhhccccccchhhh
Confidence 0001357899999999853 337899999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCcc-ccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ-LLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~-~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|||||++|||++ ||......... ..+.....+.. ....++ ...+|+.+||+.+|++|||+.|+++|+||
T Consensus 213 ~slGvi~~el~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 213 WSLGITAIELGDGDPPLADLHPMRAL-FKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred hhHHHHHHHHhcCCCCCCCCchhHHH-hhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 999999999998 55544333222 22222221211 122223 45699999999999999999999999997
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-30 Score=238.24 Aligned_cols=209 Identities=17% Similarity=0.223 Sum_probs=165.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
-||+.+|..++|.|||+++++ ...+. .+.+|+||+..+|..+...-++.++.+.++.++.|++.||.|+|++++.|
T Consensus 49 lreicllkelkhknivrl~dv-lhsdk---kltlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlh 124 (292)
T KOG0662|consen 49 LREICLLKELKHKNIVRLHDV-LHSDK---KLTLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLH 124 (292)
T ss_pred HHHHHHHHHhhhcceeehhhh-hccCc---eeEEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhh
Confidence 378889999999999999994 44443 46899999999999999777777999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||.|+||+.+|.+|++|||+++.+|.+..+.
T Consensus 125 rdlkpqnllin~ngelkladfglarafgipvrcy---------------------------------------------- 158 (292)
T KOG0662|consen 125 RDLKPQNLLINRNGELKLADFGLARAFGIPVRCY---------------------------------------------- 158 (292)
T ss_pred ccCCcceEEeccCCcEEecccchhhhcCCceEee----------------------------------------------
Confidence 9999999999999999999999997776652210
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~e 303 (720)
...+-|.||++|.++.|.. |+++.|+||.|||+.|
T Consensus 159 --------------------------------------------saevvtlwyrppdvlfgakly~tsidmwsagcifae 194 (292)
T KOG0662|consen 159 --------------------------------------------SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAE 194 (292)
T ss_pred --------------------------------------------eceeeeeeccCcceeeeeehhccchHhhhcchHHHH
Confidence 0135699999999999988 9999999999999999
Q ss_pred ccc---cCCCC-chHHHHHHHhhcCC------CC-----------cccc------ccCc----hHHHHHHHcCCCCCCCC
Q 004998 304 LFC---PFSTG-EEKTRTMSSLRHRV------LP-----------PQLL------LKFP----KEASFCLWLLHPEPSGR 352 (720)
Q Consensus 304 Llt---pf~~~-~~~~~~~~~l~~~~------~p-----------~~~~------~~~p----~~~~li~~~L~~dP~~R 352 (720)
|.. |..+. +...+.+...+.-. .| |.++ ...| ...+|+.++|.-+|..|
T Consensus 195 lanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qr 274 (292)
T KOG0662|consen 195 LANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQR 274 (292)
T ss_pred HhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccc
Confidence 998 54443 33333333332110 00 0000 0111 22489999999999999
Q ss_pred CChHHHHcCcccCCC
Q 004998 353 PKMGELLQSEFLNEP 367 (720)
Q Consensus 353 pta~eiL~hp~~~~~ 367 (720)
.+++++|+||||...
T Consensus 275 isaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 275 ISAEAALQHPYFSDF 289 (292)
T ss_pred cCHHHHhcCcccccc
Confidence 999999999999864
|
|
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-29 Score=260.37 Aligned_cols=203 Identities=15% Similarity=0.184 Sum_probs=153.9
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ ++.... .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 40 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 115 (252)
T cd05084 40 FLQEARILKQYSHPNIVRLIG-VCTQKQ---PIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHC 115 (252)
T ss_pred HHHHHHHHHhCCCCCcceEEE-EEcCCC---CeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 346777899999999999999 554443 57999999 8999999996655568999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+...... .+ .
T Consensus 116 ~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~----------------------------------~~---~-------- 150 (252)
T cd05084 116 IHRDLAARNCLVTEKNVLKISDFGMSREEEDG----------------------------------VY---A-------- 150 (252)
T ss_pred cccccchheEEEcCCCcEEECccccCcccccc----------------------------------cc---c--------
Confidence 99999999999999999999999887321100 00 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
........+..|+|||.+.+..++.++|||||||++|
T Consensus 151 -------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ 187 (252)
T cd05084 151 -------------------------------------------STGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLW 187 (252)
T ss_pred -------------------------------------------ccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHH
Confidence 0000012245699999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+.....++ ..... +...+|+.+||+++|++|||+.++++
T Consensus 188 e~~~~~~~p~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 248 (252)
T cd05084 188 EAFSLGAVPYANLSNQ-QTREAIEQGVRLP-CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ 248 (252)
T ss_pred HHHhCCCCCccccCHH-HHHHHHHcCCCCC-CcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9997 45433322 3333333332222 22333 34459999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-29 Score=263.46 Aligned_cols=212 Identities=18% Similarity=0.234 Sum_probs=160.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..+|..++++++||||+++++ ++.... ...+|++||| .|++|.+++. .....+++..+..++.||+.||.|||+
T Consensus 46 ~~~e~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~ 123 (287)
T cd06621 46 ILRELEINKSCKSPYIVKYYG-AFLDES-SSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS 123 (287)
T ss_pred HHHHHHHHHhCCCCCeeeeee-EEEccC-CCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 346778999999999999999 443332 2357999999 8999998873 234558999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
.|++|+||+|+||+++.++.++|+|||++.......
T Consensus 124 ~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-------------------------------------------- 159 (287)
T cd06621 124 RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL-------------------------------------------- 159 (287)
T ss_pred CCcccCCCCHHHEEEecCCeEEEeeccccccccccc--------------------------------------------
Confidence 999999999999999999999999998873211000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....++..|+|||.+.+..++.++|||||||
T Consensus 160 ------------------------------------------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~ 191 (287)
T cd06621 160 ------------------------------------------------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGL 191 (287)
T ss_pred ------------------------------------------------cccccCCccccCHHHhcCCCCCchhhHHHHHH
Confidence 00124578899999998888999999999999
Q ss_pred hhhhccc---cCCCCc----hHHHHHHHhhcCCCCcccc------ccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 300 LLFELFC---PFSTGE----EKTRTMSSLRHRVLPPQLL------LKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 300 ll~eLlt---pf~~~~----~~~~~~~~l~~~~~p~~~~------~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
++|+|++ ||.... ........+... .++.+. ..++ ...+|+.+||+++|.+|||+.|++.||||.
T Consensus 192 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~ 270 (287)
T cd06621 192 TLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM-PNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIK 270 (287)
T ss_pred HHHHHHhCCCCCCcccCCCCChHHHHHHHhcC-CchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccc
Confidence 9999999 554431 112222222221 111111 1222 345999999999999999999999999997
Q ss_pred CCccc
Q 004998 366 EPRDS 370 (720)
Q Consensus 366 ~~~~~ 370 (720)
.....
T Consensus 271 ~~~~~ 275 (287)
T cd06621 271 AQMKK 275 (287)
T ss_pred ccccc
Confidence 76443
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=261.71 Aligned_cols=212 Identities=16% Similarity=0.235 Sum_probs=160.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++||||+++++ ++.+.. .++++||| .|++|.+++.+.. ++++..++.++.||+.||.|||++|
T Consensus 49 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~LH~~~ 123 (268)
T cd06630 49 ALRKEIRLMARLNHPHIIRMLG-ATCEDS---HFNLFVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYLHENQ 123 (268)
T ss_pred HHHHHHHHHHHcCCCceehhhc-eeccCC---eEEEEEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3347888999999999999999 444443 57999999 9999999995543 5899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC-ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 142 IVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
++|+||||+||+++.++ .++|+|||.+.......... .+
T Consensus 124 i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~-----------------------------~~----------- 163 (268)
T cd06630 124 IIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGA-----------------------------GE----------- 163 (268)
T ss_pred eecCCCCHHHEEEcCCCCEEEEcccccccccccccccC-----------------------------Cc-----------
Confidence 99999999999998765 58999988874332110000 00
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......|+..|+|||.+.+..++.++|||||||+
T Consensus 164 ----------------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~ 197 (268)
T cd06630 164 ----------------------------------------------FQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCV 197 (268)
T ss_pred ----------------------------------------------cccccccccceeCHhHhccCCCCcccchHHHHHH
Confidence 0011357889999999988889999999999999
Q ss_pred hhhccc---cCCCCch--HHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 301 LFELFC---PFSTGEE--KTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 301 l~eLlt---pf~~~~~--~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
+|+|++ ||..... .......+.....++..... .+...+|+.+||..+|.+||++.++++||||.
T Consensus 198 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 198 IIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred HHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 999999 5543221 12222222222223333333 34556999999999999999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3e-29 Score=265.49 Aligned_cols=204 Identities=15% Similarity=0.160 Sum_probs=161.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++..+. .+|++||| .+++|.+++... ..+++..++.++.||+.||.|||+.|
T Consensus 47 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~ 121 (290)
T cd05580 47 HVLNEKRILQSIRHPFLVNLYG-SFQDDS---NLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLD 121 (290)
T ss_pred HHHHHHHHHHhCCCCCccceee-EEEcCC---eEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3446778999999999999999 444443 57999999 699999999554 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.++|+|||++......
T Consensus 122 i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~----------------------------------------------- 154 (290)
T cd05580 122 IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR----------------------------------------------- 154 (290)
T ss_pred EecCCCCHHHEEECCCCCEEEeeCCCccccCCC-----------------------------------------------
Confidence 999999999999999999999999877322100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....|++.|+|||.+.+..++.++||||||+++
T Consensus 155 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 188 (290)
T cd05580 155 ----------------------------------------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILI 188 (290)
T ss_pred ----------------------------------------------CCCCCCCccccChhhhcCCCCCccccHHHHHHHH
Confidence 0013578899999999888889999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|+|++ ||...... .....+..... .++. ..+...+++.+||..||.+|+ +++|+++||||...
T Consensus 189 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~ 260 (290)
T cd05580 189 YEMLAGYPPFFDDNPI-QIYEKILEGKV--RFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGI 260 (290)
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHhcCCc--cCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccC
Confidence 99999 66554432 23333332221 1122 234556999999999999999 89999999999775
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9e-30 Score=277.40 Aligned_cols=208 Identities=22% Similarity=0.224 Sum_probs=166.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++|||||++|. +.+... .+|+|||| .+|.|+++|.+.++ +.+.+++.+|.|++.||+|||+++||
T Consensus 103 ~rev~imk~l~HPnIvkl~~-v~~t~~---~lylV~eya~~ge~~~yl~~~gr-~~e~~ar~~F~q~vsaveYcH~k~iv 177 (596)
T KOG0586|consen 103 GREVDIMKSLNHPNIVKLFS-VIETEA---TLYLVMEYASGGELFDYLVKHGR-MKEKEARAKFRQIVSAVEYCHSKNIV 177 (596)
T ss_pred HHHHHHHHhcCCcceeeeee-eeeecc---eeEEEEEeccCchhHHHHHhccc-chhhhhhhhhHHHHHHHHHHhhccee
Confidence 38899999999999999999 666554 57999999 99999999977776 77799999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|||||.+||||+.+.++||+|||++..+.....
T Consensus 178 HrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~----------------------------------------------- 210 (596)
T KOG0586|consen 178 HRDLKAENILLDENMNIKIADFGFSTFFDYGLM----------------------------------------------- 210 (596)
T ss_pred ccccchhhcccccccceeeeccccceeeccccc-----------------------------------------------
Confidence 999999999999999999999988743321100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvll~ 302 (720)
....+|++.|.|||++.+..| ++.+|+||||++||
T Consensus 211 --------------------------------------------lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly 246 (596)
T KOG0586|consen 211 --------------------------------------------LQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLY 246 (596)
T ss_pred --------------------------------------------ccccCCCCCccChHhhcCcccCCcceehhhhhhhhe
Confidence 012589999999999999985 78999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
-|++ ||++..-..---..++....-|.+ ...+..++|.++|.++|.+|+++++++.|.|+......
T Consensus 247 ~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~--ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~ 315 (596)
T KOG0586|consen 247 ALVEGSLPFDGQNLKELRPRVLRGKYRIPFY--MSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA 315 (596)
T ss_pred eeeecccccCCcccccccchheeeeecccce--eechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence 9999 888754332212222222111211 12334589999999999999999999999999876443
|
|
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-29 Score=265.55 Aligned_cols=211 Identities=14% Similarity=0.144 Sum_probs=160.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHH-
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHS- 139 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~yLHs- 139 (720)
..+|..+|.+++||||+++++ .+.... .+|++||| .|++|.+++... ...+++..++.++.||+.||.|||+
T Consensus 46 ~~~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~ 121 (286)
T cd06622 46 IIMELDILHKAVSPYIVDFYG-AFFIEG---AVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE 121 (286)
T ss_pred HHHHHHHHHhcCCCcHHhhhh-heecCC---eEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 346777899999999999999 444432 67999999 899999988553 2358999999999999999999997
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
.||+|+||||+||+++.++.++|+|||.+.......
T Consensus 122 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-------------------------------------------- 157 (286)
T cd06622 122 HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL-------------------------------------------- 157 (286)
T ss_pred CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc--------------------------------------------
Confidence 599999999999999999999999988773221000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC------CCcccc
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP------VSCASD 293 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------~s~~sD 293 (720)
.....|++.|+|||.+.+.. ++.++|
T Consensus 158 ------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~D 189 (286)
T cd06622 158 ------------------------------------------------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSD 189 (286)
T ss_pred ------------------------------------------------cccCCCccCccCcchhcCCCCCccCCCCcccc
Confidence 00124688899999985543 588999
Q ss_pred chhhhhhhhhccc---cCCCCchH--HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 294 IYRLGVLLFELFC---PFSTGEEK--TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~--~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
||||||++|+|++ ||...... ......+.....+.......+...+|+.+||+.+|.+||++.++++||||....
T Consensus 190 iwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~ 269 (286)
T cd06622 190 VWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK 269 (286)
T ss_pred hHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence 9999999999999 66543222 122223333333332222334455999999999999999999999999998774
Q ss_pred cc
Q 004998 369 DS 370 (720)
Q Consensus 369 ~~ 370 (720)
..
T Consensus 270 ~~ 271 (286)
T cd06622 270 NA 271 (286)
T ss_pred CC
Confidence 43
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-29 Score=269.59 Aligned_cols=209 Identities=14% Similarity=0.183 Sum_probs=161.0
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..+++.++||||+++++ .+..+. .+|+|||| .+++|.+++.+. .+++..+..++.|++.||.|||+.||+
T Consensus 64 ~~e~~~l~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH~~~i~ 137 (297)
T cd06656 64 INEILVMRENKNPNIVNYLD-SYLVGD---ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLHSNQVI 137 (297)
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEecCC---EEEEeecccCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 46777899999999999999 444433 67999999 899999998543 389999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||.+........
T Consensus 138 H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~----------------------------------------------- 170 (297)
T cd06656 138 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS----------------------------------------------- 170 (297)
T ss_pred cCCCCHHHEEECCCCCEEECcCccceEccCCcc-----------------------------------------------
Confidence 999999999999999999999987732211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......|++.|+|||.+.+..++.++|||||||++|+
T Consensus 171 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~ 207 (297)
T cd06656 171 -------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 207 (297)
T ss_pred -------------------------------------------CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHH
Confidence 0001357889999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|++ ||...............+..+.......+ ...+|+.+||..+|.+||++.++++||||.....
T Consensus 208 l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 277 (297)
T cd06656 208 MVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKP 277 (297)
T ss_pred HHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccc
Confidence 999 66544332222222222222212222333 3459999999999999999999999999987643
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-29 Score=268.66 Aligned_cols=220 Identities=16% Similarity=0.159 Sum_probs=160.4
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
-+...|..+++.++||||+++++ ++.... .+|++||| .+++|.+++.. ....+++..+..++.||+.||.|||+
T Consensus 44 ~~~~~Ei~~l~~l~h~~i~~~~~-~~~~~~---~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~ 119 (314)
T cd08216 44 KLLQQEIITSRQLQHPNILPYVT-SFIVDS---ELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHS 119 (314)
T ss_pred HHHHHHHHHHHhcCCcchhhhhh-eeecCC---eEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 35557788999999999999999 444433 57999999 88999999954 33458999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+||+++.++.++++||+.+......... .....++
T Consensus 120 ~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~--------------------------~~~~~~~--------- 164 (314)
T cd08216 120 KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKR--------------------------QRVVHDF--------- 164 (314)
T ss_pred CCeecCCCCcceEEEecCCceEEecCccceeecccccc--------------------------ccccccc---------
Confidence 99999999999999999999999999877432110000 0000000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC--CCCccccchhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRL 297 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~sDIwSL 297 (720)
.....++..|+|||++.+. .++.++|||||
T Consensus 165 ------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~ 196 (314)
T cd08216 165 ------------------------------------------------PKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSV 196 (314)
T ss_pred ------------------------------------------------cccccccccccCHHHhcCCCCCCCcchhHHHH
Confidence 0113568889999999764 48899999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCC--------CCcc-----------------------cc-ccCchHHHHHH
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRV--------LPPQ-----------------------LL-LKFPKEASFCL 342 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~--------~p~~-----------------------~~-~~~p~~~~li~ 342 (720)
||++|||++ ||............+.... .+.. .. ...+...+|+.
T Consensus 197 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 276 (314)
T cd08216 197 GITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVE 276 (314)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHH
Confidence 999999998 6655443333222222110 0000 00 00123448999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 343 WLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+||.+||++|||+.++|+||||+...
T Consensus 277 ~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 277 LCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred HHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 99999999999999999999998764
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=266.23 Aligned_cols=221 Identities=15% Similarity=0.159 Sum_probs=158.5
Q ss_pred eehhhhcccCCCCCceecccceeecCC----CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~----~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+|..++..++||||+++++.++.... ....+|++|||.+++|..++......+++..++.++.||+.||.|||++
T Consensus 55 ~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~ 134 (311)
T cd07866 55 LREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN 134 (311)
T ss_pred HHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 467779999999999999995543332 1335799999977789988866555699999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+|+||||+||+++.++.++|+|||++.......... ..+
T Consensus 135 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~------------------------------~~~--------- 175 (311)
T cd07866 135 HILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNP------------------------------KGG--------- 175 (311)
T ss_pred CeecCCCCHHHEEECCCCCEEECcCccchhccCCCccc------------------------------ccC---------
Confidence 99999999999999999999999999885432210000 000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGv 299 (720)
........+...|++.|+|||.+.+. .++.++|||||||
T Consensus 176 ----------------------------------------~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~ 215 (311)
T cd07866 176 ----------------------------------------GGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGC 215 (311)
T ss_pred ----------------------------------------CcccccccccceeccCcCChHHhhCCCccCchhHhHHHHH
Confidence 00000011224679999999998765 4899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh--cCC----------------------CCcc----ccccCchHHHHHHHcCCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLR--HRV----------------------LPPQ----LLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~--~~~----------------------~p~~----~~~~~p~~~~li~~~L~~d 348 (720)
++|||++ ||.............. ... .++. +....+...+|+.+||..|
T Consensus 216 il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~ 295 (311)
T cd07866 216 VFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLD 295 (311)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccC
Confidence 9999999 4443332211111110 000 0111 1112244569999999999
Q ss_pred CCCCCChHHHHcCccc
Q 004998 349 PSGRPKMGELLQSEFL 364 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~ 364 (720)
|.+|||+.|++.||||
T Consensus 296 p~~R~t~~ell~~~~f 311 (311)
T cd07866 296 PYKRLTASDALEHPYF 311 (311)
T ss_pred cccCcCHHHHhcCCCC
Confidence 9999999999999998
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-29 Score=278.11 Aligned_cols=203 Identities=18% Similarity=0.198 Sum_probs=152.9
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC----------------------------
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------------------- 114 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------------------- 114 (720)
.+|..+++.+ +|||||++++ .+.... .+|++||| .+++|.+++.+.
T Consensus 89 ~~E~~il~~l~~h~nIv~~~~-~~~~~~---~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (374)
T cd05106 89 MSELKILSHLGQHKNIVNLLG-ACTHGG---PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEK 164 (374)
T ss_pred HHHHHHHHhhccCCceeeEee-EecCCC---CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhc
Confidence 3677888888 8999999999 444433 67999999 999999998432
Q ss_pred -----------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEE
Q 004998 115 -----------------------------------------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 153 (720)
Q Consensus 115 -----------------------------------------~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NIL 153 (720)
..++++.+++.|+.||+.||.|||++||+||||||+|||
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil 244 (374)
T cd05106 165 KYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVL 244 (374)
T ss_pred ccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEE
Confidence 124788899999999999999999999999999999999
Q ss_pred EccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccc
Q 004998 154 MSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYG 233 (720)
Q Consensus 154 l~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~ 233 (720)
++.++.++|+|||++....... .+
T Consensus 245 ~~~~~~~kL~DfGla~~~~~~~---------------------------------~~----------------------- 268 (374)
T cd05106 245 LTDGRVAKICDFGLARDIMNDS---------------------------------NY----------------------- 268 (374)
T ss_pred EeCCCeEEEeeceeeeeccCCc---------------------------------ce-----------------------
Confidence 9999999999998874321110 00
Q ss_pred cccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc----cCC
Q 004998 234 THVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFS 309 (720)
Q Consensus 234 ~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~ 309 (720)
. ......+++.|+|||++.+..++.++|||||||++|||++ ||.
T Consensus 269 -------------------------------~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~ 316 (374)
T cd05106 269 -------------------------------V-VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYP 316 (374)
T ss_pred -------------------------------e-eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCc
Confidence 0 0000234677999999988889999999999999999985 665
Q ss_pred CCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 310 TGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 310 ~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
...........+..+. .+..+.. .+...+++.+||+.||.+|||+.++++
T Consensus 317 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~ 367 (374)
T cd05106 317 GILVNSKFYKMVKRGY-QMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ 367 (374)
T ss_pred cccccHHHHHHHHccc-CccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 5433323333333322 2222222 355569999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.3e-29 Score=266.60 Aligned_cols=205 Identities=17% Similarity=0.164 Sum_probs=158.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..++..++||||+++++ ++.+.. ..|+||||..++|.+++......+++..+..++.||+.||.|||++||+|
T Consensus 63 ~~Ei~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H 138 (307)
T cd06607 63 IKEVRFLQQLRHPNTIEYKG-CYLREH---TAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIH 138 (307)
T ss_pred HHHHHHHHhCCCCCEEEEEE-EEEeCC---eEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCcee
Confidence 36777899999999999999 554443 57999999667888888554456999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
+||+|+||+++.++.++|+|||.+......
T Consensus 139 ~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-------------------------------------------------- 168 (307)
T cd06607 139 RDIKAGNILLTEPGTVKLADFGSASLVSPA-------------------------------------------------- 168 (307)
T ss_pred cCCCcccEEECCCCCEEEeecCcceecCCC--------------------------------------------------
Confidence 999999999999999999988876221000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CCCCCccccchhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLL 301 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGvll 301 (720)
....|++.|+|||++. ...++.++|||||||++
T Consensus 169 --------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il 204 (307)
T cd06607 169 --------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC 204 (307)
T ss_pred --------------------------------------------CCccCCccccCceeeeccCCCCCCcccchHHHHHHH
Confidence 0135678899999984 34488999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|||++ ||........ ...+.....+......++. ..+|+.+||..+|++||++.+++.||||....
T Consensus 205 ~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 205 IELAERKPPLFNMNAMSA-LYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred HHHHcCCCCCCCccHHHH-HHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 99999 4544333322 2223333233222233444 45999999999999999999999999998764
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-29 Score=260.06 Aligned_cols=203 Identities=18% Similarity=0.230 Sum_probs=157.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++++++||||+++++ .+.... .+|++||| .+++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 49 ~e~~~l~~~~h~~i~~~~~-~~~~~~---~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h 124 (262)
T cd06613 49 QEISMLKECRHPNIVAYFG-SYLRRD---KLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIH 124 (262)
T ss_pred HHHHHHHhCCCCChhceEE-EEEeCC---EEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCcee
Confidence 6677899999999999999 444433 58999999 889999999665456999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
+||||+||+++.++.++|+|||.+........
T Consensus 125 ~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~------------------------------------------------ 156 (262)
T cd06613 125 RDIKGANILLTEDGDVKLADFGVSAQLTATIA------------------------------------------------ 156 (262)
T ss_pred cCCChhhEEECCCCCEEECccccchhhhhhhh------------------------------------------------
Confidence 99999999999999999999887732210000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC---CCCccccchhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLL 301 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+. .++.++|||||||++
T Consensus 157 ------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l 194 (262)
T cd06613 157 ------------------------------------------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITA 194 (262)
T ss_pred ------------------------------------------ccccccCCccccCchhhcccccCCcCchhhhHHHHHHH
Confidence 00013578899999999876 789999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCc-cc--cccC-chHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPP-QL--LLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~--~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
|||++ ||......... ..+....+++ .+ ...+ +...+|+.+||..+|..|||+.+++.|+|
T Consensus 195 ~~~~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 195 IELAELQPPMFDLHPMRAL-FLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred HHHHhCCCCCCCCCHHHHH-HHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 99999 55544333222 2222222222 11 1122 33459999999999999999999999998
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-29 Score=267.08 Aligned_cols=208 Identities=18% Similarity=0.290 Sum_probs=161.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ ++..+. ..|++||| .+++|.+++.. ..+++..++.++.||+.||.|||++||+
T Consensus 66 ~~e~~~l~~l~hp~i~~~~~-~~~~~~---~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~iv 139 (297)
T cd06659 66 FNEVVIMRDYQHQNVVEMYK-SYLVGE---ELWVLMEFLQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQGVI 139 (297)
T ss_pred HHHHHHHHhCCCCchhhhhh-heeeCC---eEEEEEecCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 36777899999999999999 444443 57999999 88999998744 2489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+........
T Consensus 140 H~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~----------------------------------------------- 172 (297)
T cd06659 140 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP----------------------------------------------- 172 (297)
T ss_pred cCCCCHHHeEEccCCcEEEeechhHhhcccccc-----------------------------------------------
Confidence 999999999999999999999988732211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......|+..|+|||++.+..++.++|||||||++||
T Consensus 173 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e 209 (297)
T cd06659 173 -------------------------------------------KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIE 209 (297)
T ss_pred -------------------------------------------cccceecCccccCHHHHccCCCCchhhHHHHHHHHHH
Confidence 0001357899999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCc-ccc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPP-QLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~-~~~-~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|++ ||...... ..+..+.....+. ... ...+...+|+.+||+.+|.+||++.++++||||.+...
T Consensus 210 l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 210 MVDGEPPYFSDSPV-QAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred HHhCCCCCCCCCHH-HHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 999 55543332 2333333221111 111 22334569999999999999999999999999987743
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.8e-29 Score=261.81 Aligned_cols=193 Identities=21% Similarity=0.262 Sum_probs=150.1
Q ss_pred CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEE
Q 004998 75 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 153 (720)
Q Consensus 75 ~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NIL 153 (720)
+||||+++++ .+.... .+|+|||| .|++|.+++.... .+++.+++.++.||+.||.|||+.||+||||||+||+
T Consensus 67 ~h~~iv~~~~-~~~~~~---~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil 141 (267)
T PHA03390 67 DNPNFIKLYY-SVTTLK---GHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVL 141 (267)
T ss_pred cCCCEEEEEE-EEecCC---eeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEE
Confidence 7999999999 554443 68999999 8999999996544 6999999999999999999999999999999999999
Q ss_pred EccCC-ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcc
Q 004998 154 MSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAY 232 (720)
Q Consensus 154 l~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~ 232 (720)
++.++ .++++|||.+...+..
T Consensus 142 ~~~~~~~~~l~dfg~~~~~~~~---------------------------------------------------------- 163 (267)
T PHA03390 142 YDRAKDRIYLCDYGLCKIIGTP---------------------------------------------------------- 163 (267)
T ss_pred EeCCCCeEEEecCccceecCCC----------------------------------------------------------
Confidence 99888 9999988876322100
Q ss_pred ccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCC
Q 004998 233 GTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFS 309 (720)
Q Consensus 233 ~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~ 309 (720)
....|+..|+|||++.+..++.++|||||||++|||++ ||.
T Consensus 164 ------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~ 207 (267)
T PHA03390 164 ------------------------------------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFK 207 (267)
T ss_pred ------------------------------------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 00246889999999998889999999999999999999 665
Q ss_pred CCchHHHHHHHhhc--CCCCccccccCchHHHHHHHcCCCCCCCCCC-hHHHHcCcccCC
Q 004998 310 TGEEKTRTMSSLRH--RVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQSEFLNE 366 (720)
Q Consensus 310 ~~~~~~~~~~~l~~--~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt-a~eiL~hp~~~~ 366 (720)
...........+.. ....+.+....+...+||.+||+++|.+||+ ++++|+||||..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~ 267 (267)
T PHA03390 208 EDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI 267 (267)
T ss_pred CCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence 33221111111111 1111222234456669999999999999996 699999999963
|
|
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-29 Score=265.55 Aligned_cols=221 Identities=16% Similarity=0.181 Sum_probs=161.8
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++..++||||+++++ .+..+. .+|++||| .|++|.+++...+ .+++..+..++.||+.||.|||+.||+|
T Consensus 50 ~e~~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H 124 (305)
T cd05609 50 VERDILTFAENPFVVSMFC-SFETKR---HLCMVMEYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYLHNYGIVH 124 (305)
T ss_pred HHHHHHHhCCCCCeeeeEE-EEecCC---EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5677889999999999998 444433 67999999 8999999995543 5899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.++++|||.+......... .+ .+.....
T Consensus 125 ~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~-~~---------------------------~~~~~~~---------- 166 (305)
T cd05609 125 RDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT-NL---------------------------YEGHIEK---------- 166 (305)
T ss_pred cCCchHHEEECCCCCEEEeeCCCccccCcCccc-cc---------------------------ccccccc----------
Confidence 999999999999999999999987421110000 00 0000000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
...........|+..|+|||.+.+..++.++|||||||++|||
T Consensus 167 -------------------------------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el 209 (305)
T cd05609 167 -------------------------------------DTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEF 209 (305)
T ss_pred -------------------------------------chhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHH
Confidence 0000000113578899999999888899999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCC-CccccccCc-hHHHHHHHcCCCCCCCCCC---hHHHHcCcccCCC
Q 004998 305 FC---PFSTGEEKTRTMSSLRHRVL-PPQLLLKFP-KEASFCLWLLHPEPSGRPK---MGELLQSEFLNEP 367 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~-p~~~~~~~p-~~~~li~~~L~~dP~~Rpt---a~eiL~hp~~~~~ 367 (720)
++ ||.+.... ........... .+......+ ...+||.+||+++|++||+ +.++|+||||...
T Consensus 210 ~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 210 LVGCVPFFGDTPE-ELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred HhCCCCCCCCCHH-HHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence 99 66654333 33333333221 122222333 4569999999999999997 7999999999775
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-29 Score=266.93 Aligned_cols=208 Identities=19% Similarity=0.323 Sum_probs=161.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ .+..+. ..|++||| .+++|.+++... .+++.+++.++.||+.||.|||++||+
T Consensus 67 ~~e~~~l~~l~h~~ii~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~iv 140 (292)
T cd06658 67 FNEVVIMRDYHHENVVDMYN-SYLVGD---ELWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLHNQGVI 140 (292)
T ss_pred HHHHHHHHhCCCCcHHHHHH-heecCC---eEEEEEeCCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 36778899999999999999 444433 67999999 889999988443 389999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||++...... .
T Consensus 141 H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~-----------------------------------~------------- 172 (292)
T cd06658 141 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKE-----------------------------------V------------- 172 (292)
T ss_pred ecCCCHHHEEEcCCCCEEEccCcchhhcccc-----------------------------------c-------------
Confidence 9999999999999999999999877322100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
+ ......|++.|+|||.+.+..++.++|||||||++||
T Consensus 173 -----------------------------------------~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~e 210 (292)
T cd06658 173 -----------------------------------------P-KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIE 210 (292)
T ss_pred -----------------------------------------c-cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHH
Confidence 0 0001357899999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCcccc---ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLL---LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~---~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|++ ||...... ..+..+... .++.+. ...+...+|+.+||..||.+|||+.++++||||.....+
T Consensus 211 l~~g~~p~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~ 281 (292)
T cd06658 211 MIDGEPPYFNEPPL-QAMRRIRDN-LPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPP 281 (292)
T ss_pred HHhCCCCCCCCCHH-HHHHHHHhc-CCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCc
Confidence 999 56544332 223333322 222211 223445699999999999999999999999999976443
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-29 Score=263.28 Aligned_cols=207 Identities=19% Similarity=0.339 Sum_probs=163.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ .+.... ..|+++|| .|++|.+++.. ..+++.+++.++.||+.||.|||++||+
T Consensus 64 ~~e~~~l~~~~h~~vv~~~~-~~~~~~---~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~ 137 (285)
T cd06648 64 FNEVVIMRDYQHPNIVEMYS-SYLVGD---ELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVI 137 (285)
T ss_pred HHHHHHHHHcCCCChheEEE-EEEcCC---eEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 36777899999999999999 444433 57999999 89999999965 3489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|+||+++.++.++|+|||.+.......
T Consensus 138 H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~------------------------------------------------ 169 (285)
T cd06648 138 HRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV------------------------------------------------ 169 (285)
T ss_pred cCCCChhhEEEcCCCcEEEcccccchhhccCC------------------------------------------------
Confidence 99999999999999999999988763211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
+ ......|++.|+|||.+.+..++.++|||||||++||
T Consensus 170 -----------------------------------------~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~e 207 (285)
T cd06648 170 -----------------------------------------P-RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIE 207 (285)
T ss_pred -----------------------------------------c-ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHH
Confidence 0 0001357899999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccc---cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLL---KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~---~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|++ ||...... ..+..+.... ++.... ..+...+|+.+||+++|++||++.++++||||.....
T Consensus 208 ll~g~~p~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 277 (285)
T cd06648 208 MVDGEPPYFNEPPL-QAMKRIRDNL-PPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGP 277 (285)
T ss_pred HHhCCCCCcCCCHH-HHHHHHHhcC-CCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCCC
Confidence 999 66554332 3344444432 222111 2345569999999999999999999999999988754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.2e-29 Score=264.80 Aligned_cols=207 Identities=16% Similarity=0.150 Sum_probs=160.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
...|..+++.++||||+++++ ++.... ..++||||..++|.+++......+++..+..++.||+.||.|||+.|++
T Consensus 62 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~ 137 (308)
T cd06634 62 IIKEVRFLQKLRHPNTIQYRG-CYLREH---TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 137 (308)
T ss_pred HHHHHHHHHhCCCCCcccEEE-EEEcCC---eeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 336778999999999999999 444432 5799999966789888855555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++++|||.+......
T Consensus 138 H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~------------------------------------------------- 168 (308)
T cd06634 138 HRDVKAGNILLSEPGLVKLGDFGSASIMAPA------------------------------------------------- 168 (308)
T ss_pred cCCCCHHhEEECCCCcEEECCcccceeecCc-------------------------------------------------
Confidence 9999999999999999999888876221000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC---CCCCccccchhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDIwSLGvl 300 (720)
....|++.|+|||.+.+ ..++.++|||||||+
T Consensus 169 ---------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~i 203 (308)
T cd06634 169 ---------------------------------------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 203 (308)
T ss_pred ---------------------------------------------ccccCCccccCHHHHhhcccCCCCcccchHHHHHH
Confidence 01356889999999853 447889999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|+|++ ||........ ...+.....+......++ ...+||.+||.++|.+||++.+++.|||+.....
T Consensus 204 l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~~ 275 (308)
T cd06634 204 CIELAERKPPLFNMNAMSA-LYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 275 (308)
T ss_pred HHHHHcCCCCCccccHHHH-HHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccCC
Confidence 999998 5544433322 223333333333233344 3459999999999999999999999999998644
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.1e-29 Score=258.87 Aligned_cols=203 Identities=16% Similarity=0.211 Sum_probs=155.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++.+++||||+++++ ++.... .++++||| .+++|.+++......+++..++.++.||+.||.|||+.||+
T Consensus 47 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 122 (256)
T cd05113 47 IEEAKVMMKLSHEKLVQLYG-VCTKQR---PIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFI 122 (256)
T ss_pred HHHHHHHhcCCCCCeeeEEE-EEccCC---CcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 35778899999999999999 554433 57999999 88999999965544689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.+||+|||.+.....+. +
T Consensus 123 H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~----------------------------------~------------- 155 (256)
T cd05113 123 HRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE----------------------------------Y------------- 155 (256)
T ss_pred ccccCcceEEEcCCCCEEECCCccceecCCCc----------------------------------e-------------
Confidence 99999999999999999999988763321100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
. ......++..|+|||.+.+..++.++|||||||++|+
T Consensus 156 -----------------------~-------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~ 193 (256)
T cd05113 156 -----------------------T-------------------SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWE 193 (256)
T ss_pred -----------------------e-------------------ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHH
Confidence 0 0000234678999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|++ ||...... .....+.....++......+...+++.+||+++|.+||++.+|+.+
T Consensus 194 l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 194 VYSLGKMPYERFNNS-ETVEKVSQGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HhcCCCCCcCcCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 997 55443332 3333344333332222233455699999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.8e-29 Score=272.53 Aligned_cols=242 Identities=19% Similarity=0.227 Sum_probs=171.3
Q ss_pred ccccccCCcccccccccCCC------CCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCc
Q 004998 22 AWQDSDSSRALNISGVSDRN------PRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDP 95 (720)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~ 95 (720)
|..+++..+.+|.++++... ...++++|........ ......|..+|++++|||+|+|+| +|.+... .
T Consensus 73 AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~LlG-yC~e~~~--~ 146 (361)
T KOG1187|consen 73 ATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLLG-YCLEGGE--H 146 (361)
T ss_pred HHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEEE-EEecCCc--e
Confidence 44566666667777665522 2333444322222211 122447888999999999999999 5654432 4
Q ss_pred EEEEEec-CCCCHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEccCCceEEeccCcccC
Q 004998 96 FVHAIEW-GDVSLRQWLDKPKR-SVDVYECLHIFRQIVEIVYAAHSQ---GIVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 96 ~~lv~E~-~ggsL~~~L~~~~~-~l~~~~~~~i~~QIl~aL~yLHs~---gIvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
.++|+|| ..|+|.++|..... +++|...+.|+.+++.||+|||.. .||||||||+||||+.+.++||+|||+|+.
T Consensus 147 ~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~ 226 (361)
T KOG1187|consen 147 RLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKL 226 (361)
T ss_pred EEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCccc
Confidence 6999999 88999999955444 799999999999999999999984 499999999999999999999988888732
Q ss_pred CCC-CCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccc
Q 004998 171 SGS-DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILD 249 (720)
Q Consensus 171 ~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d 249 (720)
... ..
T Consensus 227 ~~~~~~-------------------------------------------------------------------------- 232 (361)
T KOG1187|consen 227 GPEGDT-------------------------------------------------------------------------- 232 (361)
T ss_pred CCcccc--------------------------------------------------------------------------
Confidence 211 00
Q ss_pred cccchhhhhcccCCCCcccccc-ccCCcccCCccccCCCCCccccchhhhhhhhhcccc---CCCCc------hHHHHHH
Q 004998 250 NRVNVEQVEEKKQPFPMKQILL-METNWYASPEELAGAPVSCASDIYRLGVLLFELFCP---FSTGE------EKTRTMS 319 (720)
Q Consensus 250 ~g~~~~~~~~~~~~~~~~~~~~-~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltp---f~~~~------~~~~~~~ 319 (720)
..... .||.+|+|||.+..+..+.++|||||||+|.||+++ ..... -......
T Consensus 233 -----------------~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~ 295 (361)
T KOG1187|consen 233 -----------------SVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKP 295 (361)
T ss_pred -----------------ceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHH
Confidence 00001 689999999999888899999999999999999993 22211 1111122
Q ss_pred Hhhc----CCCCcccc-ccCc--h----HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 320 SLRH----RVLPPQLL-LKFP--K----EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 320 ~l~~----~~~p~~~~-~~~p--~----~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
.+.. .++.|.+. ..++ + .+.+..+|++.+|..||++.|+++
T Consensus 296 ~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~ 347 (361)
T KOG1187|consen 296 LLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK 347 (361)
T ss_pred HHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence 2222 23445544 3444 2 237899999999999999999754
|
|
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.8e-29 Score=258.16 Aligned_cols=204 Identities=14% Similarity=0.140 Sum_probs=156.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ +++.. .+++|||| .+++|.+++......+++..++.++.||+.||.|||++|+
T Consensus 42 ~~~E~~~l~~l~h~~ii~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 116 (257)
T cd05115 42 MMREAEIMHQLDNPYIVRMIG-VCEAE----ALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNF 116 (257)
T ss_pred HHHHHHHHHhcCCCCeEEEEE-EEcCC----CeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCe
Confidence 346778999999999999999 55432 57999999 8999999996555569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.+||+|||.+.........
T Consensus 117 ~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------------------- 151 (257)
T cd05115 117 VHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY--------------------------------------------- 151 (257)
T ss_pred eecccchheEEEcCCCcEEeccCCccccccCCccc---------------------------------------------
Confidence 99999999999999999999999887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.. ......++..|+|||.+.+..++.++|||||||++|
T Consensus 152 ----------------------~~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 189 (257)
T cd05115 152 ----------------------YK--------------------ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMW 189 (257)
T ss_pred ----------------------ee--------------------ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHH
Confidence 00 000012356899999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++......+...+++.+||..+|++||++.+|++
T Consensus 190 el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 190 EAFSYGQKPYKKMKGP-EVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred HHhcCCCCCcCcCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9985 55544333 344444444333322333455569999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.7e-28 Score=263.41 Aligned_cols=205 Identities=16% Similarity=0.165 Sum_probs=159.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
...|..+++.++||||+++++ ++..+. ..|++|||..++|.+++.....++++..+..++.||+.||.|||++||+
T Consensus 72 ~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~ 147 (317)
T cd06635 72 IIKEVKFLQRIKHPNSIEYKG-CYLREH---TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMI 147 (317)
T ss_pred HHHHHHHHHhCCCCCEEEEEE-EEeeCC---eEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 336778999999999999999 554443 5799999966789888855556699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|+||+++.++.++|+|||.+......
T Consensus 148 H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~------------------------------------------------- 178 (317)
T cd06635 148 HRDIKAGNILLTEPGQVKLADFGSASIASPA------------------------------------------------- 178 (317)
T ss_pred cCCCCcccEEECCCCCEEEecCCCccccCCc-------------------------------------------------
Confidence 9999999999999999999988876221000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CCCCCccccchhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGvl 300 (720)
....|++.|+|||.+. ...++.++|||||||+
T Consensus 179 ---------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvi 213 (317)
T cd06635 179 ---------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 213 (317)
T ss_pred ---------------------------------------------ccccCCccccChhhhhcCCCCCCCccccHHHHHHH
Confidence 0135688899999984 3458999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||........ ...+.....++.....++ ...+|+.+||+.+|.+||++.++++|+|+...
T Consensus 214 l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 214 CIELAERKPPLFNMNAMSA-LYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred HHHHHhCCCCCCCccHHHH-HHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 999999 5544433322 223333333333233333 44599999999999999999999999998765
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-29 Score=247.55 Aligned_cols=222 Identities=14% Similarity=0.187 Sum_probs=166.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC----CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA----AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~----~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
-.-+|..+|..+.|+|++.+++++-.... ....+|+||.++..+|.-+|......++..++..++.+++.||.|+|
T Consensus 62 talreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iH 141 (376)
T KOG0669|consen 62 TALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIH 141 (376)
T ss_pred HHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHH
Confidence 34478889999999999999983332211 12248999999999999999666566999999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
...|+|||+||+|+||+.+|.+||+|||+++.+....-.
T Consensus 142 r~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~----------------------------------------- 180 (376)
T KOG0669|consen 142 RNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNV----------------------------------------- 180 (376)
T ss_pred HhhHHhhcccHhhEEEcCCceEEeeccccccceeccccc-----------------------------------------
Confidence 999999999999999999999999888887543211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSL 297 (720)
.+.+-+..+-|.||++||.+.|.. |+++.|||+.
T Consensus 181 ---------------------------------------------~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgA 215 (376)
T KOG0669|consen 181 ---------------------------------------------VKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGA 215 (376)
T ss_pred ---------------------------------------------CCCCcccceeeeecCCHHHhhcccccCCcchhHhH
Confidence 000112256799999999999876 9999999999
Q ss_pred hhhhhhccc--cCCCCchHHHHHH---HhhcCCCCcccc-------------------------------ccCchHHHHH
Q 004998 298 GVLLFELFC--PFSTGEEKTRTMS---SLRHRVLPPQLL-------------------------------LKFPKEASFC 341 (720)
Q Consensus 298 Gvll~eLlt--pf~~~~~~~~~~~---~l~~~~~p~~~~-------------------------------~~~p~~~~li 341 (720)
|||+.||++ |....+....... .+...+.+..++ ..-+..++|+
T Consensus 216 gCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLl 295 (376)
T KOG0669|consen 216 GCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLL 295 (376)
T ss_pred HHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHH
Confidence 999999999 5433332222222 222211111100 0112446999
Q ss_pred HHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 342 LWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
..||..||.+|+.+.++|+|.||....-+
T Consensus 296 e~ll~~DP~kR~~ad~alnh~~F~kdp~p 324 (376)
T KOG0669|consen 296 EKLLKLDPTKRIDADQALNHDFFWKDPMP 324 (376)
T ss_pred HHHhccCcccCcchHhhhchhhhhcCCcc
Confidence 99999999999999999999999886444
|
|
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.4e-29 Score=261.36 Aligned_cols=208 Identities=16% Similarity=0.181 Sum_probs=155.8
Q ss_pred eehhhhcccC-CCCCceecccceeecCC---CCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEA---AIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~---~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~y 136 (720)
.+|..++.++ +||||+++++ ++.... ....+|++||| .+++|.+++... ...+++..++.++.||+.||.|
T Consensus 50 ~~e~~~l~~~~~h~~i~~~~~-~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~ 128 (275)
T cd06608 50 KEEYNILRKYSNHPNIATFYG-AFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAY 128 (275)
T ss_pred HHHHHHHHHhcCCCChheEEE-EEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 3666788887 7999999999 443332 24568999999 889999988432 3568999999999999999999
Q ss_pred HHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||++||+|+||+|+||+++.++.++|+|||.+.......
T Consensus 129 lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~----------------------------------------- 167 (275)
T cd06608 129 LHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTL----------------------------------------- 167 (275)
T ss_pred HhcCCcccCCCCHHHEEEccCCeEEECCCccceecccch-----------------------------------------
Confidence 999999999999999999999999999988773221000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-----CCCcc
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-----PVSCA 291 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-----~~s~~ 291 (720)
.......|++.|+|||++... .++.+
T Consensus 168 -------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~ 198 (275)
T cd06608 168 -------------------------------------------------GRRNTFIGTPYWMAPEVIACDEQPDASYDAR 198 (275)
T ss_pred -------------------------------------------------hhhcCccccccccCHhHhcccccccCCcccc
Confidence 000013578899999998542 37889
Q ss_pred ccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccc-cccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL-LLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~-~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|||||||++|+|++ ||........... +.....+... ...++ ...+|+.+||..||++|||+.++++|||+
T Consensus 199 ~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 199 SDVWSLGITAIELADGKPPLCDMHPMRALFK-IPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred ccHHHhHHHHHHHHhCCCCccccchHHHHHH-hhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 999999999999999 6654433322222 2222222111 11133 34599999999999999999999999996
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-30 Score=252.42 Aligned_cols=250 Identities=15% Similarity=0.129 Sum_probs=168.2
Q ss_pred cCCcccccccccC-------CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeec-CCCCCcEEE
Q 004998 27 DSSRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCEN-EAAIDPFVH 98 (720)
Q Consensus 27 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~-~~~~~~~~l 98 (720)
..-+.+|.+|++- .+.+..+-+|+.+... +..-+.-+|+..-++++||||+++++..... .+.....|+
T Consensus 24 ri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~---~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yl 100 (302)
T KOG2345|consen 24 RIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQ---EDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYL 100 (302)
T ss_pred EEeeeecCCCceeeeeecccCcccchhhheeeccch---HHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEE
Confidence 4456677777765 3444455555555431 1222223666778889999999999833322 224456899
Q ss_pred EEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHHcC--ceeccCCCCcEEEccCCceEEeccCcccCCC
Q 004998 99 AIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSG 172 (720)
Q Consensus 99 v~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs~g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g 172 (720)
+++| ..|+|.+.+. ..+..+++.+++.||.+|++||.+||+.. ++||||||.|||+++++.+++.|||.++...
T Consensus 101 l~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~ 180 (302)
T KOG2345|consen 101 LLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAP 180 (302)
T ss_pred EeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccc
Confidence 9999 9999999993 34446999999999999999999999998 9999999999999999999999999985421
Q ss_pred CCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccccccccc
Q 004998 173 SDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRV 252 (720)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~ 252 (720)
..-- ..+ +...+.+.
T Consensus 181 i~i~-----------------------~~~----------------------------------------~a~~lQe~-- 195 (302)
T KOG2345|consen 181 IQIE-----------------------GSR----------------------------------------QALRLQEW-- 195 (302)
T ss_pred eEee-----------------------chH----------------------------------------HHHHHHHH--
Confidence 1100 000 00000000
Q ss_pred chhhhhcccCCCCccccccccCCcccCCccccCCC---CCccccchhhhhhhhhccc---cCCCCchHH--HHHHHhhcC
Q 004998 253 NVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVLLFELFC---PFSTGEEKT--RTMSSLRHR 324 (720)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwSLGvll~eLlt---pf~~~~~~~--~~~~~l~~~ 324 (720)
.....|..|+|||.+.-.. .+.++|||||||+||+|+. ||....... .+.......
T Consensus 196 ----------------a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q 259 (302)
T KOG2345|consen 196 ----------------AEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQ 259 (302)
T ss_pred ----------------HHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccc
Confidence 0123488899999996443 7899999999999999998 665421110 001111111
Q ss_pred CCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 325 VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 325 ~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
...|.-........+|+++||++||.+||++.+++.
T Consensus 260 ~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~ 295 (302)
T KOG2345|consen 260 ISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLS 295 (302)
T ss_pred cccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 111221222233349999999999999999999986
|
|
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-29 Score=266.55 Aligned_cols=211 Identities=19% Similarity=0.202 Sum_probs=153.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC----CCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~----~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+|..++..++||||+++++ ++.+.. ...+|+||||.+++|.+++.. ....+++..++.++.||+.||.|||++
T Consensus 50 ~~e~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 127 (316)
T cd07842 50 CREIALLRELKHENVVSLVE-VFLEHA-DKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN 127 (316)
T ss_pred HHHHHHHHhcCCCCccceEE-EEeCCC-CceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC
Confidence 36778999999999999999 554432 236899999977789888732 123589999999999999999999999
Q ss_pred CceeccCCCCcEEEcc----CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 141 GIVVHNVRPSCFVMSS----FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 141 gIvHrDLKP~NILl~~----~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||+||||||+||+++. ++.+|++|||++.........
T Consensus 128 ~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------------- 168 (316)
T cd07842 128 WVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKP--------------------------------------- 168 (316)
T ss_pred CEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCccc---------------------------------------
Confidence 9999999999999998 899999998887432111000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccch
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIY 295 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIw 295 (720)
........++++|+|||++.+. .++.++|||
T Consensus 169 ------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 200 (316)
T cd07842 169 ------------------------------------------------LADLDPVVVTIWYRAPELLLGARHYTKAIDIW 200 (316)
T ss_pred ------------------------------------------------ccccCCccccccccCHHHHhCCCCCCcHHHHH
Confidence 0000114678999999998765 489999999
Q ss_pred hhhhhhhhccc---cCCCCchHH------------HHHHHhh------------------------cCCCC-cccc----
Q 004998 296 RLGVLLFELFC---PFSTGEEKT------------RTMSSLR------------------------HRVLP-PQLL---- 331 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~------------~~~~~l~------------------------~~~~p-~~~~---- 331 (720)
||||++|+|++ ||....... .....+. ....+ ..+.
T Consensus 201 slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (316)
T cd07842 201 AIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWME 280 (316)
T ss_pred HHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHH
Confidence 99999999999 554322110 0000000 00001 0000
Q ss_pred ---ccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 332 ---LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 332 ---~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
...+...+++.+||++||++|||+.|+++||||
T Consensus 281 ~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 281 KHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred hccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 122345599999999999999999999999998
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.3e-29 Score=265.43 Aligned_cols=203 Identities=15% Similarity=0.154 Sum_probs=149.8
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------------------CCCCHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------------------RSVDVYECLH 125 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~------------------~~l~~~~~~~ 125 (720)
.+|..+|.+++||||+++++ ++.+.. .++++||| .+++|.+++.... ..+++..++.
T Consensus 67 ~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (304)
T cd05096 67 LKEVKILSRLKDPNIIRLLG-VCVDED---PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLH 142 (304)
T ss_pred HHHHHHHhhcCCCCeeEEEE-EEecCC---ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHH
Confidence 36778999999999999999 554443 57999999 8999999984321 2367788999
Q ss_pred HHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcc
Q 004998 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||+.||+||||||+|||++.++.+||+|||+++.....
T Consensus 143 i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~------------------------------- 191 (304)
T cd05096 143 VALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAG------------------------------- 191 (304)
T ss_pred HHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccC-------------------------------
Confidence 9999999999999999999999999999999999999999887432110
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC
Q 004998 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
+. .. ......++..|+|||++.+
T Consensus 192 ---~~----------------------------------~~--------------------~~~~~~~~~~y~aPE~~~~ 214 (304)
T cd05096 192 ---DY----------------------------------YR--------------------IQGRAVLPIRWMAWECILM 214 (304)
T ss_pred ---ce----------------------------------eE--------------------ecCcCCCCccccCHHHHhc
Confidence 00 00 0001245788999999988
Q ss_pred CCCCccccchhhhhhhhhccc-----cCCCCchHHHHHHHh----hcC--CCCccccccC-chHHHHHHHcCCCCCCCCC
Q 004998 286 APVSCASDIYRLGVLLFELFC-----PFSTGEEKTRTMSSL----RHR--VLPPQLLLKF-PKEASFCLWLLHPEPSGRP 353 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt-----pf~~~~~~~~~~~~l----~~~--~~p~~~~~~~-p~~~~li~~~L~~dP~~Rp 353 (720)
..++.++|||||||++|||++ ||...... ...... ... .......... +...+|+.+||..||.+||
T Consensus 215 ~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP 293 (304)
T cd05096 215 GKFTTASDVWAFGVTLWEILMLCKEQPYGELTDE-QVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERP 293 (304)
T ss_pred CCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHH-HHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCc
Confidence 889999999999999999985 55543322 111111 111 1111111223 3455999999999999999
Q ss_pred ChHHHHc
Q 004998 354 KMGELLQ 360 (720)
Q Consensus 354 ta~eiL~ 360 (720)
|+.+|.+
T Consensus 294 s~~~i~~ 300 (304)
T cd05096 294 SFSDIHA 300 (304)
T ss_pred CHHHHHH
Confidence 9999954
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.6e-30 Score=251.92 Aligned_cols=201 Identities=18% Similarity=0.238 Sum_probs=163.2
Q ss_pred cccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCC
Q 004998 71 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRP 149 (720)
Q Consensus 71 Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gIvHrDLKP 149 (720)
+...+.|.||+.||.|..+. .+++.||..+.-+..+|+.-.++++|..+-++...++.||.||-. +||||||+||
T Consensus 145 ~~s~dcpyIV~c~GyFi~n~----dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKP 220 (391)
T KOG0983|consen 145 LKSHDCPYIVQCFGYFITNT----DVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKP 220 (391)
T ss_pred hhccCCCeeeeeeeEEeeCc----hHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCc
Confidence 33455899999999444443 368899998778888887767779999999999999999999996 6999999999
Q ss_pred CcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCC
Q 004998 150 SCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSS 229 (720)
Q Consensus 150 ~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~ 229 (720)
+|||++..|++||||||++-.. .|- +
T Consensus 221 SNILlDe~GniKlCDFGIsGrl------------------------------------vdS---k--------------- 246 (391)
T KOG0983|consen 221 SNILLDERGNIKLCDFGISGRL------------------------------------VDS---K--------------- 246 (391)
T ss_pred cceEEccCCCEEeeccccccee------------------------------------ecc---c---------------
Confidence 9999999999999999987211 110 0
Q ss_pred CccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC---CCCccccchhhhhhhhhccc
Q 004998 230 SAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~s~~sDIwSLGvll~eLlt 306 (720)
..+...|.+.|||||-+.-. .|+..+||||||+.|+||.|
T Consensus 247 -------------------------------------AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaT 289 (391)
T KOG0983|consen 247 -------------------------------------AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELAT 289 (391)
T ss_pred -------------------------------------ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhc
Confidence 01123689999999998544 39999999999999999999
Q ss_pred ---cCCCCchHHHHHHHhhcCCCCccccc---cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 307 ---PFSTGEEKTRTMSSLRHRVLPPQLLL---KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 307 ---pf~~~~~~~~~~~~l~~~~~p~~~~~---~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||........++..+.+. .||.+.. ..|...+|+..||.+|+.+||.-.++|+|||+...
T Consensus 290 g~yPy~~c~tdFe~ltkvln~-ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~y 355 (391)
T KOG0983|consen 290 GQYPYKGCKTDFEVLTKVLNE-EPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRY 355 (391)
T ss_pred ccCCCCCCCccHHHHHHHHhc-CCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeec
Confidence 888877777777777764 3454433 45777899999999999999999999999999886
|
|
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6e-29 Score=257.50 Aligned_cols=206 Identities=17% Similarity=0.231 Sum_probs=162.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...|..++++++||||+++++ ++.... ..|++||| .+++|.+++.. ....+++..++.++.||+.||.|||++|
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~ 121 (256)
T cd08218 46 SRKEVAVLSNMKHPNIVQYQE-SFEENG---NLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRK 121 (256)
T ss_pred HHHHHHHHHhCCCCCeeeeEe-eecCCC---eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 346777999999999999999 444433 68999999 89999999954 3345899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++++|||.+........
T Consensus 122 i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------- 156 (256)
T cd08218 122 ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE--------------------------------------------- 156 (256)
T ss_pred EecCCCCHHHEEEcCCCCEEEeeccceeecCcchh---------------------------------------------
Confidence 99999999999999999999999887732211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|++.|+|||++.+..++.++|+|||||++
T Consensus 157 ---------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~ 191 (256)
T cd08218 157 ---------------------------------------------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVL 191 (256)
T ss_pred ---------------------------------------------hhhhccCCccccCHHHhCCCCCCCccchhHHHHHH
Confidence 00013578889999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+|++ ||....... ....+..+..++......+...++|.+||+.+|.+||++.++++||||
T Consensus 192 ~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 192 YEMCTLKHAFEAGNMKN-LVLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred HHHHcCCCCccCCCHHH-HHHHHhcCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 99999 555544433 333333444443333334456699999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.9e-29 Score=259.40 Aligned_cols=204 Identities=17% Similarity=0.176 Sum_probs=160.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ .+..+. .+|++||| .|++|.+++... .++++..+..++.||+.||.|||++|
T Consensus 46 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (258)
T cd05578 46 NVLNERRILQELNHPFLVNLWY-SFQDEE---NMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKG 120 (258)
T ss_pred HHHHHHHHHHhCCCCChHHHHH-hhcCCC---eEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446777899999999999999 444333 68999999 899999999655 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.++|+|||.+.......
T Consensus 121 i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---------------------------------------------- 154 (258)
T cd05578 121 IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT---------------------------------------------- 154 (258)
T ss_pred eeccCCCHHHeEEcCCCCEEEeecccccccCCCc----------------------------------------------
Confidence 9999999999999999999999998774321110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||.+.+..++.++|+|||||++
T Consensus 155 ---------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 189 (258)
T cd05578 155 ---------------------------------------------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTA 189 (258)
T ss_pred ---------------------------------------------cccccCCChhhcCHHHHcccCCCCcccchhhHHHH
Confidence 00013568889999999888899999999999999
Q ss_pred hhccc---cCCCCch--HHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCCh--HHHHcCccc
Q 004998 302 FELFC---PFSTGEE--KTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKM--GELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~--~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta--~eiL~hp~~ 364 (720)
|+|++ ||..... .......... ..+..+..+| ...+++.+||..||.+||++ .|+++||||
T Consensus 190 ~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 190 YECLRGKRPYRGHSRTIRDQIRAKQET--ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred HHHHhCCCCCCCCCccHHHHHHHHhcc--ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 99998 5554432 2222322221 2222233344 45599999999999999999 999999997
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=5e-29 Score=260.06 Aligned_cols=196 Identities=12% Similarity=0.129 Sum_probs=145.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++..++||||+++++ ++.... ..+++||| .+++|..++......+++..++.++.||+.||+|||++||+
T Consensus 52 ~~~~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv 127 (262)
T cd05077 52 FETASMMRQVSHKHIVLLYG-VCVRDV---ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLV 127 (262)
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEecCC---CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeE
Confidence 35667889999999999999 444443 45899999 88999998865555699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCc-------eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 144 VHNVRPSCFVMSSFNH-------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 144 HrDLKP~NILl~~~~~-------vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||||||+|||++.++. ++++|||.+......
T Consensus 128 H~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~------------------------------------------ 165 (262)
T cd05077 128 HGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR------------------------------------------ 165 (262)
T ss_pred CCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc------------------------------------------
Confidence 9999999999986654 666666554211000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-CCCCCccccch
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIY 295 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~s~~sDIw 295 (720)
....++..|+|||.+. +..++.++|||
T Consensus 166 ----------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~Diw 193 (262)
T cd05077 166 ----------------------------------------------------QECVERIPWIAPECVEDSKNLSIAADKW 193 (262)
T ss_pred ----------------------------------------------------ccccccccccChhhhcCCCCCCchhHHH
Confidence 0135678899999987 45589999999
Q ss_pred hhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 296 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 296 SLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
||||++|||++ ||...... . ...+.....+ ......+...+|+.+||+.||.+||++.+|+++
T Consensus 194 slG~~l~el~~~~~~p~~~~~~~-~-~~~~~~~~~~-~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 194 SFGTTLWEICYNGEIPLKDKTLA-E-KERFYEGQCM-LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred HHHHHHHHHHhCCCCCCCCcchh-H-HHHHHhcCcc-CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 99999999984 44433221 1 1112222111 111223455699999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-29 Score=271.54 Aligned_cols=218 Identities=18% Similarity=0.160 Sum_probs=155.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+++.++||||+++++ ++..+. .++++||| .+++|.+++.+. ...+++..++.++.||+.||+|||+.
T Consensus 45 ~~~~e~~~~~~l~h~niv~~~~-~~~~~~---~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~ 120 (328)
T cd08226 45 ALQNEVVLSHFFRHPNIMTSWT-VFTTGS---WLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN 120 (328)
T ss_pred HHHHHHHHHHhCCCCCcceEee-eEecCC---ceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3346777888899999999999 555543 57999999 889999999543 33589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.++++||+.+...... ++..+.
T Consensus 121 ~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~----- 160 (328)
T cd08226 121 GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRN-----------------------------------GQKAKV----- 160 (328)
T ss_pred CeecCCCCHHHEEEeCCCcEEEechHHHhhhhcc-----------------------------------Cccccc-----
Confidence 9999999999999999999999888654211000 000000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC--CCCccccchhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLG 298 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~sDIwSLG 298 (720)
..+ .+ ....++..|+|||++.+. .++.++||||||
T Consensus 161 --------------------------~~~--------------~~---~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG 197 (328)
T cd08226 161 --------------------------VYD--------------FP---QFSTSVLPWLSPELLRQDLYGYNVKSDIYSVG 197 (328)
T ss_pred --------------------------ccc--------------cc---ccccCccCccChhhhcCCCCCCCchhhHHHHH
Confidence 000 00 001346679999999764 378999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCc---------------------------------------------cc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPP---------------------------------------------QL 330 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~---------------------------------------------~~ 330 (720)
|++|||++ ||............+......+ ..
T Consensus 198 ~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (328)
T cd08226 198 ITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSS 277 (328)
T ss_pred HHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhh
Confidence 99999998 5544333322222222111000 00
Q ss_pred cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 331 LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 331 ~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
....+...+|+.+||..||++|||+.|+|+||||...
T Consensus 278 ~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~ 314 (328)
T cd08226 278 KTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV 314 (328)
T ss_pred hhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence 0112334599999999999999999999999999765
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.5e-29 Score=256.36 Aligned_cols=201 Identities=17% Similarity=0.208 Sum_probs=154.5
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+|.+++||||+++++ ++.... .++++||| .+++|.+++......+++..++.++.||+.||.|||++||+|
T Consensus 48 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 123 (256)
T cd05114 48 EEAKVMMKLSHPKLVQLYG-VCTQQK---PLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIH 123 (256)
T ss_pred HHHHHHHHCCCCCceeEEE-EEccCC---CEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5777999999999999999 554443 57999999 899999999654445899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.++++|||.+.........
T Consensus 124 ~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~----------------------------------------------- 156 (256)
T cd05114 124 RDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT----------------------------------------------- 156 (256)
T ss_pred cccCcceEEEcCCCeEEECCCCCccccCCCcee-----------------------------------------------
Confidence 999999999999999999988877432111000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
......++..|+|||.+.+..++.++|||||||++|||
T Consensus 157 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el 194 (256)
T cd05114 157 ------------------------------------------SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEV 194 (256)
T ss_pred ------------------------------------------ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHH
Confidence 00001345679999999888899999999999999999
Q ss_pred cc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 305 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 305 lt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++ ||...... .....+..+..+.......+...+|+.+||..+|.+||++.++++
T Consensus 195 ~~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 195 FTEGKMPFEKKSNY-EVVEMISRGFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred HcCCCCCCCCCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 98 55544333 333444433222221222334569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.1e-29 Score=258.71 Aligned_cols=206 Identities=20% Similarity=0.264 Sum_probs=157.5
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++.+++||||+++++ ++.... .+++|||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++|++|
T Consensus 57 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H 131 (272)
T cd06629 57 SEIETLKDLDHLNIVQYLG-FETTEE---YLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYLHSKGILH 131 (272)
T ss_pred HHHHHHHhcCCCCcceEEE-EeccCC---ceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeee
Confidence 5777899999999999999 554443 57999999 8999999996553 5899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||+|+||+++.++.++++|||.+....... ..
T Consensus 132 ~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---------------------------------~~-------------- 164 (272)
T cd06629 132 RDLKADNLLVDADGICKISDFGISKKSDDIY---------------------------------DN-------------- 164 (272)
T ss_pred cCCChhhEEEcCCCeEEEeeccccccccccc---------------------------------cc--------------
Confidence 9999999999999999999998873321000 00
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC--CCccccchhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVLLF 302 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwSLGvll~ 302 (720)
.......|+..|+|||.+.... ++.++|+||||+++|
T Consensus 165 -----------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~ 203 (272)
T cd06629 165 -----------------------------------------DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVL 203 (272)
T ss_pred -----------------------------------------cccccccCCccccCHHHhccccCCCCccchhHHHHHHHH
Confidence 0001135788999999987654 789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc---CCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH---RVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~---~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|++ ||............... ..+++......+ ...+|+.+||+++|..||++.++|+||||
T Consensus 204 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 204 EMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred HHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 9999 55443333222221111 122222222333 44599999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-29 Score=258.72 Aligned_cols=198 Identities=15% Similarity=0.151 Sum_probs=152.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..|..++++++||||+++++.++..+. ..|++||| .+++|.+++.+.. ..+++..++.++.||+.||.|||++||
T Consensus 47 ~~e~~~l~~l~~~~i~~~~~~~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 123 (256)
T cd05082 47 LAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNF 123 (256)
T ss_pred HHHHHHHHhCCCCCeeeEEEEEEcCCC---ceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 367779999999999999994444332 57999999 8899999995433 348999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.+|++|||.+...... .
T Consensus 124 ~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~---------------------------------~-------------- 156 (256)
T cd05082 124 VHRDLAARNVLVSEDNVAKVSDFGLTKEASST---------------------------------Q-------------- 156 (256)
T ss_pred eccccchheEEEcCCCcEEecCCccceecccc---------------------------------C--------------
Confidence 99999999999999999999998877321000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
....++..|+|||++.+..++.++|||||||++|
T Consensus 157 ----------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~ 190 (256)
T cd05082 157 ----------------------------------------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLW 190 (256)
T ss_pred ----------------------------------------------CCCccceeecCHHHHccCCCCchhhhHHHHHHHH
Confidence 0012356799999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||..... ......+.... ++......| ...+|+.+||+.+|++|||+.++++
T Consensus 191 ~l~~~g~~p~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 191 EIYSFGRVPYPRIPL-KDVVPRVEKGY-KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred HHHhCCCCCCCCCCH-HHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 9996 5544322 23333343332 222333334 4459999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=267.60 Aligned_cols=215 Identities=17% Similarity=0.189 Sum_probs=169.9
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..||.++.||.||.+-. .|+..+ .+++|||-..|+..+.| ....+.+++...+.++.||+.||.|||-+||||
T Consensus 612 ~EVaILq~l~HPGiV~le~-M~ET~e---rvFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvH 687 (888)
T KOG4236|consen 612 NEVAILQNLHHPGIVNLEC-MFETPE---RVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVH 687 (888)
T ss_pred HHHHHHHhcCCCCeeEEEE-eecCCc---eEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceee
Confidence 5667999999999999988 565554 57999999666766666 444455999999999999999999999999999
Q ss_pred ccCCCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 145 HNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 145 rDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
+||||+|||+.+ .-++||||||+++..|... |
T Consensus 688 CDLKPENVLLas~~~FPQvKlCDFGfARiIgEks----------------------------------F----------- 722 (888)
T KOG4236|consen 688 CDLKPENVLLASASPFPQVKLCDFGFARIIGEKS----------------------------------F----------- 722 (888)
T ss_pred ccCCchheeeccCCCCCceeeccccceeecchhh----------------------------------h-----------
Confidence 999999999973 3578888888887655431 1
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
....+|||.|+|||++....|..+-|+||+|||+
T Consensus 723 ----------------------------------------------RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIi 756 (888)
T KOG4236|consen 723 ----------------------------------------------RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVII 756 (888)
T ss_pred ----------------------------------------------hhhhcCCccccCHHHHhhccccccccceeeeEEE
Confidence 1126899999999999999999999999999999
Q ss_pred hhccccCCCCchHHHHHHHhhcC--CCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCCccchHHHH
Q 004998 302 FELFCPFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEERE 375 (720)
Q Consensus 302 ~eLltpf~~~~~~~~~~~~l~~~--~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l~e~~ 375 (720)
|--|++-.++++...+...|.+. .+|+..+.+.+.++ |||..+|+..-.+|.+++..|.|||++..+.-+.-++
T Consensus 757 YVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq~w~DLRe 833 (888)
T KOG4236|consen 757 YVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQTWLDLRE 833 (888)
T ss_pred EEEecccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcchHHHHHHH
Confidence 99998333333333334444432 35666666665555 9999999999999999999999999999855444433
|
|
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.6e-29 Score=263.17 Aligned_cols=203 Identities=19% Similarity=0.190 Sum_probs=155.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------------CCCCHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------------RSVDVYECLHIFRQIV 131 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~------------~~l~~~~~~~i~~QIl 131 (720)
.+|..++.+++||||+++++ ++.... .++++||| .+++|.++|.... ..+++..++.++.||+
T Consensus 55 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~ 130 (288)
T cd05093 55 HREAELLTNLQHEHIVKFYG-VCVEGD---PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIA 130 (288)
T ss_pred HHHHHHHHhCCCCCcceEEE-EEecCC---ccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHH
Confidence 46778999999999999999 554433 57999999 8999999995322 2489999999999999
Q ss_pred HHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccc
Q 004998 132 EIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 132 ~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
.||+|||++||+||||||+||+++.++.++|+|||.+....... .
T Consensus 131 ~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~----------------------------------~- 175 (288)
T cd05093 131 AGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD----------------------------------Y- 175 (288)
T ss_pred HHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCc----------------------------------e-
Confidence 99999999999999999999999999999999998874321110 0
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcc
Q 004998 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~ 291 (720)
........+++.|+|||.+.+..++.+
T Consensus 176 -----------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 202 (288)
T cd05093 176 -----------------------------------------------------YRVGGHTMLPIRWMPPESIMYRKFTTE 202 (288)
T ss_pred -----------------------------------------------------eecCCCCCccccccCHHHhccCCCCch
Confidence 000001245778999999988889999
Q ss_pred ccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 292 SDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 292 sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||||||++|+|++ ||...... .....+..+..++......+...+|+.+||++||.+|||+.+++.
T Consensus 203 sDiwslG~il~~l~t~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~ 274 (288)
T cd05093 203 SDVWSLGVVLWEIFTYGKQPWYQLSNN-EVIECITQGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS 274 (288)
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 999999999999997 44443332 333444444333322233345669999999999999999999964
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-29 Score=266.84 Aligned_cols=201 Identities=15% Similarity=0.157 Sum_probs=151.8
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHHH
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIF 127 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i~ 127 (720)
.+|..++.++ +||||+++++ ++..+. .+|++||| .+++|.+++.+.. ..+++..++.++
T Consensus 55 ~~Ei~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 130 (303)
T cd05088 55 AGELEVLCKLGHHPNIINLLG-ACEHRG---YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 130 (303)
T ss_pred HHHHHHHHHhcCCCCcceEEE-EECCCC---CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHH
Confidence 3577788888 8999999999 554443 57999999 8999999995322 247899999999
Q ss_pred HHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccc
Q 004998 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||+|||++||+||||||+|||++.++.++|+|||++......
T Consensus 131 ~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--------------------------------- 177 (303)
T cd05088 131 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY--------------------------------- 177 (303)
T ss_pred HHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchh---------------------------------
Confidence 99999999999999999999999999999999999988876311000
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC
Q 004998 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
. ......++..|+|||.+.+..
T Consensus 178 ----~------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~ 199 (303)
T cd05088 178 ----V------------------------------------------------------KKTMGRLPVRWMAIESLNYSV 199 (303)
T ss_pred ----h------------------------------------------------------hcccCCCcccccCHHHHhccC
Confidence 0 000012356799999998888
Q ss_pred CCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
++.++|||||||++|||++ ||...... .....+.....++......+...+|+.+||+.+|++||++.+++++
T Consensus 200 ~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 276 (303)
T cd05088 200 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 276 (303)
T ss_pred CcccccchhhhhHHHHHHhcCCCCcccCChH-HHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999999999996 55443332 2333333222222222233455699999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.5e-29 Score=269.80 Aligned_cols=204 Identities=18% Similarity=0.220 Sum_probs=154.4
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC----------------------------
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------------------- 115 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------------------- 115 (720)
.|..++.++ +||||+++++.+...+ ..++++||| .+++|.++|....
T Consensus 59 ~E~~~~~~l~~h~niv~~~~~~~~~~---~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (337)
T cd05054 59 TELKILIHIGHHLNVVNLLGACTKPG---GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDS 135 (337)
T ss_pred HHHHHHHhhccCcchhheeeeEecCC---CCEEEEEecCCCCCHHHHHHhcccccccccccccccccccccccccccccc
Confidence 567788888 8999999999443332 267899999 9999999984311
Q ss_pred --------------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEe
Q 004998 116 --------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFI 163 (720)
Q Consensus 116 --------------------------------~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkli 163 (720)
..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~ 215 (337)
T cd05054 136 VSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKIC 215 (337)
T ss_pred CCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEe
Confidence 257899999999999999999999999999999999999999999999
Q ss_pred ccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccc
Q 004998 164 ESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQ 243 (720)
Q Consensus 164 Dfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~ 243 (720)
|||++........ .
T Consensus 216 DfG~a~~~~~~~~--------------------------------~---------------------------------- 229 (337)
T cd05054 216 DFGLARDIYKDPD--------------------------------Y---------------------------------- 229 (337)
T ss_pred ccccchhcccCcc--------------------------------h----------------------------------
Confidence 9998743211000 0
Q ss_pred cccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc----cCCCCchHHHHHH
Q 004998 244 EHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMS 319 (720)
Q Consensus 244 ~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~ 319 (720)
.......++..|+|||++.+..++.++|||||||++|||++ ||...........
T Consensus 230 ----------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~ 287 (337)
T cd05054 230 ----------------------VRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCR 287 (337)
T ss_pred ----------------------hhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHH
Confidence 00001245678999999999999999999999999999986 5654333323333
Q ss_pred HhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 320 SLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 320 ~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
.+..+..+.......+...+++.+||+.+|++||++.|+++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~ 328 (337)
T cd05054 288 RLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVE 328 (337)
T ss_pred HHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 44443333222233455669999999999999999999987
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.1e-29 Score=257.50 Aligned_cols=203 Identities=18% Similarity=0.214 Sum_probs=158.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...|..+++.++||||+++++ .+.+.. .+|++||| .+++|.+++.. ....+++..++.++.||+.||.|||++|
T Consensus 45 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~ 120 (255)
T cd08219 45 SRKEAVLLAKMKHPNIVAFKE-SFEADG---HLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKR 120 (255)
T ss_pred HHHHHHHHHhCCCCCcceEEE-EEEECC---EEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 346777899999999999999 555443 68999999 89999999843 4455899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+||+++.++.++++|||.+....... .+
T Consensus 121 i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~----------- 156 (255)
T cd08219 121 VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG---------------------------------AY----------- 156 (255)
T ss_pred cccCCCCcceEEECCCCcEEEcccCcceeecccc---------------------------------cc-----------
Confidence 9999999999999999999999998873321110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....|++.|+|||++.+..++.++||||||+++
T Consensus 157 ----------------------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~ 190 (255)
T cd08219 157 ----------------------------------------------ACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCIL 190 (255)
T ss_pred ----------------------------------------------cccccCCccccCHHHHccCCcCchhhhhhhchhh
Confidence 0013578899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|+|++ ||...... .....+..+..++..........+|+.+||+.||.+||++.+++.-
T Consensus 191 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 191 YELCTLKHPFQANSWK-NLILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred eehhhccCCCCCCCHH-HHHHHHhcCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 99998 66554332 3333444444433322233445699999999999999999999863
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.3e-29 Score=257.54 Aligned_cols=201 Identities=14% Similarity=0.130 Sum_probs=155.3
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+++.++||||+++++ ++..+ .++++||| .+++|.+++.... .+++..+..++.||+.||.|||++||+|
T Consensus 45 ~e~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~~i~H 118 (257)
T cd05116 45 REANVMQQLDNPYIVRMIG-ICEAE----SWMLVMELAELGPLNKFLQKNK-HVTEKNITELVHQVSMGMKYLEETNFVH 118 (257)
T ss_pred HHHHHHHhCCCCCcceEEE-EEcCC----CcEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEee
Confidence 6777999999999999999 55432 46899999 8899999995443 4899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||.||+++.++.++|+|||.+...+.... +
T Consensus 119 ~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~---------------------------------~-------------- 151 (257)
T cd05116 119 RDLAARNVLLVTQHYAKISDFGLSKALGADEN---------------------------------Y-------------- 151 (257)
T ss_pred cccchhhEEEcCCCeEEECCCccccccCCCCC---------------------------------e--------------
Confidence 99999999999999999999888743321100 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
. .......++..|+|||.+....++.++|||||||++|||
T Consensus 152 ~----------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 191 (257)
T cd05116 152 Y----------------------------------------KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEA 191 (257)
T ss_pred e----------------------------------------eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHH
Confidence 0 000002346789999999888899999999999999999
Q ss_pred cc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 305 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 305 lt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++ ||...... .....+..+..++......++..+||.+||.+||++||++.+|.+
T Consensus 192 ~t~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 192 FSYGQKPYKGMKGN-EVTQMIESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred HhCCCCCCCCCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 96 55544332 444455554443333334455669999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-29 Score=262.33 Aligned_cols=208 Identities=18% Similarity=0.208 Sum_probs=155.3
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..++.+++||||+++++. +.... ....|++|||.+++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 52 ~~e~~~l~~l~h~ni~~~~~~-~~~~~-~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H 129 (293)
T cd07843 52 LREINILLKLQHPNIVTVKEV-VVGSN-LDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILH 129 (293)
T ss_pred HHHHHHHHhcCCCCEEEEEEE-EEecC-CCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 357788999999999999994 43331 2368999999667999999655556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
+||||+||+++.++.++|+|||.+...+.... .
T Consensus 130 ~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--------------------------------~--------------- 162 (293)
T cd07843 130 RDLKTSNLLLNNRGILKICDFGLAREYGSPLK--------------------------------P--------------- 162 (293)
T ss_pred ccCCHHHEEECCCCcEEEeecCceeeccCCcc--------------------------------c---------------
Confidence 99999999999999999999988743321100 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~e 303 (720)
.....+++.|+|||.+.+.. ++.++|||||||++||
T Consensus 163 -------------------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~ 199 (293)
T cd07843 163 -------------------------------------------YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAE 199 (293)
T ss_pred -------------------------------------------cccccccccccCchhhcCCccccchhhHHHHHHHHHH
Confidence 00124688999999987654 6899999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc--------------------C--------CCCcccccc--CchHHHHHHHcCCCCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRH--------------------R--------VLPPQLLLK--FPKEASFCLWLLHPEPS 350 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~--------------------~--------~~p~~~~~~--~p~~~~li~~~L~~dP~ 350 (720)
|++ ||............... . .+...+... .+...+|+.+||+.+|+
T Consensus 200 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 279 (293)
T cd07843 200 LLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPA 279 (293)
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCcc
Confidence 999 44433222111111000 0 000111111 23345999999999999
Q ss_pred CCCChHHHHcCccc
Q 004998 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+|||+.|+|+||||
T Consensus 280 ~R~t~~ell~~~~f 293 (293)
T cd07843 280 KRISAEDALKHPYF 293 (293)
T ss_pred ccCCHHHHhcCCCC
Confidence 99999999999998
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-29 Score=271.74 Aligned_cols=209 Identities=17% Similarity=0.211 Sum_probs=158.7
Q ss_pred ehhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..+++.++||||+++++.+.... .....+|+|+||.|++|.+++... .+++..++.++.||+.||.|||+.||+
T Consensus 63 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~LH~~gi~ 140 (343)
T cd07851 63 RELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYIHSAGII 140 (343)
T ss_pred HHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5778999999999999998443222 223358999999888999998542 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+......
T Consensus 141 H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~------------------------------------------------- 171 (343)
T cd07851 141 HRDLKPSNIAVNEDCELKILDFGLARHTDDE------------------------------------------------- 171 (343)
T ss_pred cCCCCHHHeEECCCCCEEEcccccccccccc-------------------------------------------------
Confidence 9999999999999999999999887332100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
.....++..|+|||.+.+. .++.++|||||||++|
T Consensus 172 --------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~ 207 (343)
T cd07851 172 --------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMA 207 (343)
T ss_pred --------------------------------------------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHH
Confidence 0013568899999998654 5789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc--CCCCc----------------------------cccccCchHHHHHHHcCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH--RVLPP----------------------------QLLLKFPKEASFCLWLLHPEP 349 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~--~~~p~----------------------------~~~~~~p~~~~li~~~L~~dP 349 (720)
||++ ||........ ...+.. +..++ ......+...+|+.+||..+|
T Consensus 208 elltg~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P 286 (343)
T cd07851 208 ELLTGKTLFPGSDHIDQ-LKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDP 286 (343)
T ss_pred HHHhCCCCCCCCChHHH-HHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCCh
Confidence 9999 5654433221 111111 00110 011123445599999999999
Q ss_pred CCCCChHHHHcCcccCCCccc
Q 004998 350 SGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~~~~ 370 (720)
.+|||+.+|++||||......
T Consensus 287 ~~Rpt~~ell~h~~~~~~~~~ 307 (343)
T cd07851 287 DKRITAAEALAHPYLAEYHDP 307 (343)
T ss_pred hhCCCHHHHhcCCCccccCCC
Confidence 999999999999999987444
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.4e-30 Score=258.08 Aligned_cols=213 Identities=18% Similarity=0.213 Sum_probs=160.8
Q ss_pred ccceeeeehhhhcccCCCCCceecccceeec--CCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Q 004998 59 DFELRKHSDGVELTHGDHLRNQGGLSGVCEN--EAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 59 ~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~--~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
....|..||..++..++|+||++++.++... ......+|+|||+...+|.+.+. -.++-..+..|++|++.|+.|
T Consensus 57 ~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~---~elDH~tis~i~yq~~~~ik~ 133 (369)
T KOG0665|consen 57 THAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDANLCQVIL---MELDHETISYILYQMLCGIKH 133 (369)
T ss_pred ccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhhhHHHHHHH---HhcchHHHHHHHHHHHHHHHH
Confidence 4555888999999999999999999943321 12233479999999999999884 227788999999999999999
Q ss_pred HHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||+.||+||||||+||++..++.+|+.|||.++.-+. ||
T Consensus 134 lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~-----------------------------------~~------ 172 (369)
T KOG0665|consen 134 LHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDT-----------------------------------DF------ 172 (369)
T ss_pred HHhcceeecccCcccceecchhheeeccchhhcccCc-----------------------------------cc------
Confidence 9999999999999999999999999998888743211 11
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchh
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
.-+.++.|..|.|||++.+..|...+||||
T Consensus 173 --------------------------------------------------~mtpyVvtRyyrapevil~~~~ke~vdiwS 202 (369)
T KOG0665|consen 173 --------------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWS 202 (369)
T ss_pred --------------------------------------------------ccCchhheeeccCchheeccCCcccchhhh
Confidence 112368899999999999999999999999
Q ss_pred hhhhhhhcccc---CCCCchHHHH--------------HHHhh------------------cCCCCcc-----ccc---c
Q 004998 297 LGVLLFELFCP---FSTGEEKTRT--------------MSSLR------------------HRVLPPQ-----LLL---K 333 (720)
Q Consensus 297 LGvll~eLltp---f~~~~~~~~~--------------~~~l~------------------~~~~p~~-----~~~---~ 333 (720)
+||++.||+++ |++....... +..+. ...+|.. ... .
T Consensus 203 vGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~ 282 (369)
T KOG0665|consen 203 VGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLD 282 (369)
T ss_pred hhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccc
Confidence 99999999982 3332211111 11110 0011111 111 1
Q ss_pred CchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 334 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 334 ~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
.....+++.+||..||++|.+++++|+||||+
T Consensus 283 ~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 283 CSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred hHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 11223899999999999999999999999998
|
|
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-29 Score=269.21 Aligned_cols=219 Identities=17% Similarity=0.201 Sum_probs=159.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++.+++||||+++++.+.... .....+|++|||.+++|.+++... .+++..++.++.||+.||.|||+.|
T Consensus 49 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~LH~~~ 126 (336)
T cd07849 49 RTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQ--HLSNDHIQYFLYQILRGLKYIHSAN 126 (336)
T ss_pred HHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446888999999999999999433222 123457999999777999888443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||++......... .
T Consensus 127 ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~----------- 163 (336)
T cd07849 127 VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH--------------------------------T----------- 163 (336)
T ss_pred eeccCCCHHHEEECCCCCEEECcccceeeccccccc--------------------------------c-----------
Confidence 999999999999999999999999887432111000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvl 300 (720)
. ......||+.|+|||.+.+ ..++.++|||||||+
T Consensus 164 -----------------------------------------~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvi 199 (336)
T cd07849 164 -----------------------------------------G---FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCI 199 (336)
T ss_pred -----------------------------------------C---CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHH
Confidence 0 0011467999999998765 458999999999999
Q ss_pred hhhccc---cCCCCchHHHH--HHHhhcCC-------------------CC--c------cccccCchHHHHHHHcCCCC
Q 004998 301 LFELFC---PFSTGEEKTRT--MSSLRHRV-------------------LP--P------QLLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~--~~~l~~~~-------------------~p--~------~~~~~~p~~~~li~~~L~~d 348 (720)
+|+|++ ||......... +..+.... .+ + ......+...+|+.+||+.+
T Consensus 200 l~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 279 (336)
T cd07849 200 LAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFN 279 (336)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCC
Confidence 999999 55433221110 00000000 00 0 01122345569999999999
Q ss_pred CCCCCChHHHHcCcccCCCccc
Q 004998 349 PSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|++|||+.|+++||||....+.
T Consensus 280 P~~Rpt~~e~l~hp~~~~~~~~ 301 (336)
T cd07849 280 PHKRITVEEALAHPYLEQYHDP 301 (336)
T ss_pred hhhCcCHHHHhcCccccccCCC
Confidence 9999999999999999988654
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=259.47 Aligned_cols=203 Identities=15% Similarity=0.098 Sum_probs=154.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|...+++++||||+++++ ++... ..++++|| .+++|.+++......+++..++.++.||+.||.|||++|+
T Consensus 56 ~~~~~~~l~~l~h~~iv~~~~-~~~~~----~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 130 (279)
T cd05111 56 ITDHMLAMGSLDHAYIVRLLG-ICPGA----SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRM 130 (279)
T ss_pred HHHHHHHHhcCCCCCcceEEE-EECCC----ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 346667889999999999999 44322 35788999 8999999996655669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.++........ .
T Consensus 131 iH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~------------ 166 (279)
T cd05111 131 VHRNLAARNILLKSDSIVQIADFGVADLLYPDDKK--------------------------------Y------------ 166 (279)
T ss_pred eccccCcceEEEcCCCcEEEcCCccceeccCCCcc--------------------------------c------------
Confidence 99999999999999999999999887432111000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+..++.++|||||||++|
T Consensus 167 --------------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~ 202 (279)
T cd05111 167 --------------------------------------------FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVW 202 (279)
T ss_pred --------------------------------------------ccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHH
Confidence 000124577899999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++..........+++.+||..||+.|||+.|+++
T Consensus 203 el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~ 263 (279)
T cd05111 203 EMMSYGAEPYAGMRPH-EVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELAN 263 (279)
T ss_pred HHHcCCCCCCCCCCHH-HHHHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 9997 55443322 223333333333322222234569999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-29 Score=271.09 Aligned_cols=218 Identities=18% Similarity=0.223 Sum_probs=159.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++||||+++++.+.... .....+|++|||.+++|.+++...+ .+++..++.++.||+.||.|||++|
T Consensus 50 ~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ 128 (337)
T cd07858 50 RTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMDTDLHQIIRSSQ-TLSDDHCQYFLYQLLRGLKYIHSAN 128 (337)
T ss_pred HHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCCCCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446888999999999999999433221 1223589999997789999996544 5999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+||+++.++.++|+|||++...... ..+
T Consensus 129 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~---------------------------------~~~----------- 164 (337)
T cd07858 129 VLHRDLKPSNLLLNANCDLKICDFGLARTTSEK---------------------------------GDF----------- 164 (337)
T ss_pred EecCCCCHHHEEEcCCCCEEECcCccccccCCC---------------------------------ccc-----------
Confidence 999999999999999999999998877332110 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvl 300 (720)
.....++..|+|||.+.+ ..++.++|||||||+
T Consensus 165 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i 198 (337)
T cd07858 165 ----------------------------------------------MTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCI 198 (337)
T ss_pred ----------------------------------------------ccccccccCccChHHHhcCCCCCCcccHHHHHHH
Confidence 001356889999999865 358999999999999
Q ss_pred hhhccc---cCCCCchHH--HHHHHhhc------------------------CCCC---ccccccCchHHHHHHHcCCCC
Q 004998 301 LFELFC---PFSTGEEKT--RTMSSLRH------------------------RVLP---PQLLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~--~~~~~l~~------------------------~~~p---~~~~~~~p~~~~li~~~L~~d 348 (720)
+|+|++ ||...+... ........ ...+ .......+...+|+.+||+++
T Consensus 199 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 278 (337)
T cd07858 199 FAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFD 278 (337)
T ss_pred HHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCC
Confidence 999998 454322110 00000000 0000 001122344459999999999
Q ss_pred CCCCCChHHHHcCcccCCCccch
Q 004998 349 PSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~~l 371 (720)
|++|||+.++|+||||.......
T Consensus 279 P~~Rps~~ell~h~~~~~~~~~~ 301 (337)
T cd07858 279 PSKRITVEEALAHPYLASLHDPS 301 (337)
T ss_pred hhhccCHHHHHcCcchhhhcCcc
Confidence 99999999999999998865543
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.7e-29 Score=261.71 Aligned_cols=202 Identities=18% Similarity=0.200 Sum_probs=155.4
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFRQ 129 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i~~Q 129 (720)
+|..++++++||||+++++ ++.... ..++|||| .+++|.+++.... ..+++..++.++.|
T Consensus 56 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 131 (291)
T cd05094 56 REAELLTNLQHEHIVKFYG-VCGDGD---PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 131 (291)
T ss_pred HHHHHHhcCCCCCcceEEE-EEccCC---ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHH
Confidence 6777899999999999999 554443 57999999 8999999995422 23789999999999
Q ss_pred HHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccc
Q 004998 130 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 209 (720)
Q Consensus 130 Il~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~D 209 (720)
|+.||.|||++||+||||||+|||++.++.++|+|||.+........
T Consensus 132 i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~--------------------------------- 178 (291)
T cd05094 132 IASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY--------------------------------- 178 (291)
T ss_pred HHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCce---------------------------------
Confidence 99999999999999999999999999999999999988743211100
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCC
Q 004998 210 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 289 (720)
Q Consensus 210 fgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s 289 (720)
. .......++..|+|||.+.+..++
T Consensus 179 ~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~ 203 (291)
T cd05094 179 Y-------------------------------------------------------RVGGHTMLPIRWMPPESIMYRKFT 203 (291)
T ss_pred e-------------------------------------------------------ecCCCCCcceeecChHHhccCCCC
Confidence 0 000013467889999999988899
Q ss_pred ccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 290 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++|||||||++|||++ ||...... .....+..+..+.......+...+|+.+||+.+|++||++.++++
T Consensus 204 ~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~ 277 (291)
T cd05094 204 TESDVWSFGVILWEIFTYGKQPWFQLSNT-EVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK 277 (291)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 99999999999999997 44443332 334444444333322222334569999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-29 Score=263.32 Aligned_cols=201 Identities=13% Similarity=0.107 Sum_probs=151.9
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHH
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHI 126 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i 126 (720)
..+|..++.++ +||||+++++ ++.... .+|++||| .+++|.+++.+.. ..+++..++.+
T Consensus 49 ~~~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i 124 (297)
T cd05089 49 FAGELEVLCKLGHHPNIINLLG-ACENRG---YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQF 124 (297)
T ss_pred HHHHHHHHHhhcCCCchhheEE-EEccCC---cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHH
Confidence 34677788888 7999999999 444433 57999999 8899999994421 24889999999
Q ss_pred HHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004998 127 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 127 ~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
+.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 125 ~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~-------------------------------- 172 (297)
T cd05089 125 ASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVY-------------------------------- 172 (297)
T ss_pred HHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccce--------------------------------
Confidence 999999999999999999999999999999999999988876311000
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004998 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
+ . ......+..|+|||.+.+.
T Consensus 173 ---~--~------------------------------------------------------~~~~~~~~~y~aPE~~~~~ 193 (297)
T cd05089 173 ---V--K------------------------------------------------------KTMGRLPVRWMAIESLNYS 193 (297)
T ss_pred ---e--c------------------------------------------------------cCCCCcCccccCchhhccC
Confidence 0 0 0001124569999999888
Q ss_pred CCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++.++|||||||++|||++ ||...... .....+..+..++......+...+|+.+||..+|.+||+++++++
T Consensus 194 ~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 270 (297)
T cd05089 194 VYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISV 270 (297)
T ss_pred CCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 89999999999999999996 66554433 333344433332222223345569999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.2e-29 Score=261.32 Aligned_cols=204 Identities=19% Similarity=0.196 Sum_probs=154.1
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHc-Cceec
Q 004998 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVH 145 (720)
Q Consensus 70 ~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs~-gIvHr 145 (720)
.++.++||||+++++ .+..+. .+|++|||..++|.+++.. ....+++..++.++.||+.||.|||++ +++||
T Consensus 53 ~~~~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~ 128 (283)
T cd06617 53 SMRSVDCPYTVTFYG-ALFREG---DVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHR 128 (283)
T ss_pred HHHHcCCCCeeeeeE-EEecCC---cEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecC
Confidence 456689999999999 444333 5799999977899888733 334589999999999999999999997 99999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+||+++.++.+||+|||.+.......
T Consensus 129 dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-------------------------------------------------- 158 (283)
T cd06617 129 DVKPSNVLINRNGQVKLCDFGISGYLVDSV-------------------------------------------------- 158 (283)
T ss_pred CCCHHHEEECCCCCEEEeeccccccccccc--------------------------------------------------
Confidence 999999999999999999988873221000
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC----CCCCccccchhhhhhh
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG----APVSCASDIYRLGVLL 301 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||.+.+ ..++.++|||||||++
T Consensus 159 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l 197 (283)
T cd06617 159 -----------------------------------------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITM 197 (283)
T ss_pred -----------------------------------------ccccccCCccccChhhcCCcccccccCccccchhhHHHH
Confidence 0001356888999999865 3478999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|+|++ ||..................+......+| ...+|+.+||..+|.+||++.++++||||....
T Consensus 198 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 198 IELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred HHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 99999 55443222222333333322222222344 445999999999999999999999999999864
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-29 Score=272.47 Aligned_cols=211 Identities=16% Similarity=0.212 Sum_probs=157.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..+|..++.+++||||+++++ ++.... ....+|+++++.|++|.+++... .+++..++.++.||+.||.|||++
T Consensus 63 ~~~Ei~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~ 139 (345)
T cd07877 63 TYRELRLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSA 139 (345)
T ss_pred HHHHHHHHHHcCCCcccceee-eeeecccccccccEEEEehhcccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 336778999999999999999 443322 22357899999889999988543 389999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.++|+|||++......
T Consensus 140 ~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~---------------------------------------------- 173 (345)
T cd07877 140 DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE---------------------------------------------- 173 (345)
T ss_pred CeeecCCChHHEEEcCCCCEEEeccccccccccc----------------------------------------------
Confidence 9999999999999999999999988876321000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGv 299 (720)
.....|+++|+|||.+.+ ..++.++|||||||
T Consensus 174 -----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~ 206 (345)
T cd07877 174 -----------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGC 206 (345)
T ss_pred -----------------------------------------------ccccccCCCccCHHHHhCccCCCchhhHHHHHH
Confidence 001357889999999876 45889999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc-CC-----------------------CCc-c----ccccCchHHHHHHHcCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRH-RV-----------------------LPP-Q----LLLKFPKEASFCLWLLHP 347 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~-~~-----------------------~p~-~----~~~~~p~~~~li~~~L~~ 347 (720)
++|||++ ||............+.. .. .+. . +....+...+||.+||++
T Consensus 207 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 286 (345)
T cd07877 207 IMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVL 286 (345)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCC
Confidence 9999998 55443322111111100 00 000 0 111234556999999999
Q ss_pred CCCCCCChHHHHcCcccCCCccc
Q 004998 348 EPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
||.+||++.++++||||.+...+
T Consensus 287 dp~~R~t~~e~l~h~~f~~~~~~ 309 (345)
T cd07877 287 DSDKRITAAQALAHAYFAQYHDP 309 (345)
T ss_pred ChhhcCCHHHHhcChhhhhcCCC
Confidence 99999999999999999976443
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-29 Score=261.91 Aligned_cols=211 Identities=17% Similarity=0.218 Sum_probs=153.6
Q ss_pred eehhhhcccCC-CCCceecccceeecCC-CCCcEEEEEecCCCCHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGD-HLRNQGGLSGVCENEA-AIDPFVHAIEWGDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 65 ~~e~~~Ls~l~-HpnIV~l~~~~~~~~~-~~~~~~lv~E~~ggsL~~~L~~~----~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.+|..+++.+. ||||+++++.+..... ....+|++|||..++|.+++... ...+++..++.++.||+.||.|||
T Consensus 48 ~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH 127 (295)
T cd07837 48 LREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH 127 (295)
T ss_pred HHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 35777888885 6999999994443332 23347999999666899998432 235899999999999999999999
Q ss_pred HcCceeccCCCCcEEEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 139 SQGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
++||+||||||+||+++. ++.++|+|||.+..+.... .
T Consensus 128 ~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~--------------------------------~--------- 166 (295)
T cd07837 128 KHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPV--------------------------------K--------- 166 (295)
T ss_pred HCCeeecCCChHHEEEecCCCeEEEeecccceecCCCc--------------------------------c---------
Confidence 999999999999999998 8899999988774321110 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwS 296 (720)
......++++|+|||.+.+. .++.++||||
T Consensus 167 -------------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s 197 (295)
T cd07837 167 -------------------------------------------------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWS 197 (295)
T ss_pred -------------------------------------------------ccCCcccccCCCChHHhhCCCCCCchHHHHH
Confidence 00012468899999998764 4799999999
Q ss_pred hhhhhhhccc---cCCCCchHHHHHHHhhcCC------------------CC---cc----c-cccCchHHHHHHHcCCC
Q 004998 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRV------------------LP---PQ----L-LLKFPKEASFCLWLLHP 347 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~------------------~p---~~----~-~~~~p~~~~li~~~L~~ 347 (720)
|||++|+|++ ||................. .+ +. . ....+...+||.+||.+
T Consensus 198 lG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 277 (295)
T cd07837 198 VGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRY 277 (295)
T ss_pred HHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccC
Confidence 9999999999 5655443322222111100 00 00 0 11223445999999999
Q ss_pred CCCCCCChHHHHcCcccC
Q 004998 348 EPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~ 365 (720)
||.+||++.|+|.||||+
T Consensus 278 ~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 278 DPAKRISAKAALTHPYFD 295 (295)
T ss_pred ChhhcCCHHHHhcCCCcC
Confidence 999999999999999985
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.6e-29 Score=257.16 Aligned_cols=195 Identities=17% Similarity=0.150 Sum_probs=147.0
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccC
Q 004998 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
..+....||||+++++ ++... ..+|++||| .|++|.+++.+.. .+++..+..++.||+.||.|||++||+||||
T Consensus 37 ~~~~~~~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dl 111 (237)
T cd05576 37 LTIIPHCVPNMVCLHK-YIVSE---DSVFLVLQHAEGGKLWSHISKFL-NIPEECVKRWAAEMVVALDALHREGIVCRDL 111 (237)
T ss_pred HHHHhcCCCceeehhh-heecC---CeEEEEEecCCCCCHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCC
Confidence 3444567999999999 44433 268999999 8999999995543 4999999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccccc
Q 004998 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+||+++.++.++++|||.+...+...
T Consensus 112 kp~Nil~~~~~~~~l~df~~~~~~~~~~---------------------------------------------------- 139 (237)
T cd05576 112 NPNNILLDDRGHIQLTYFSRWSEVEDSC---------------------------------------------------- 139 (237)
T ss_pred CHHHEEEcCCCCEEEecccchhcccccc----------------------------------------------------
Confidence 9999999999999999888663211000
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhcccc
Q 004998 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCP 307 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltp 307 (720)
....++..|+|||.+.+..++.++||||+||++|||+++
T Consensus 140 -----------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g 178 (237)
T cd05576 140 -----------------------------------------DGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTG 178 (237)
T ss_pred -----------------------------------------ccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHC
Confidence 002346779999999888899999999999999999995
Q ss_pred CCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh-----HHHHcCccc
Q 004998 308 FSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFL 364 (720)
Q Consensus 308 f~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta-----~eiL~hp~~ 364 (720)
..................+|+. ..+...+||.+||+.||++||++ +++++||||
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 179 KTLVECHPSGINTHTTLNIPEW---VSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred cchhhcCchhcccccccCCccc---CCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 4322111000000000112211 22445699999999999999986 999999997
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=261.25 Aligned_cols=207 Identities=18% Similarity=0.253 Sum_probs=154.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++..++||||+++++ ++..+. ..|++|||.+++|.+++......+++..++.++.||+.||.|||+.||+
T Consensus 50 ~~~e~~~l~~l~h~ni~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~ 125 (291)
T cd07870 50 AIREASLLKGLKHANIVLLHD-IIHTKE---TLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHIL 125 (291)
T ss_pred HHHHHHHHHhcCCCCEeEEEE-EEecCC---eEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 346778899999999999999 454443 5799999966889888855445588999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.++.......
T Consensus 126 H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~----------------------------------------------- 158 (291)
T cd07870 126 HRDLKPQNLLISYLGELKLADFGLARAKSIPSQ----------------------------------------------- 158 (291)
T ss_pred cCCCChHHEEEcCCCcEEEeccccccccCCCCC-----------------------------------------------
Confidence 999999999999999999999988743211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
......+++.|+|||.+.+. .++.++|||||||++|
T Consensus 159 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~ 195 (291)
T cd07870 159 -------------------------------------------TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFI 195 (291)
T ss_pred -------------------------------------------CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHH
Confidence 00012468899999998764 3788999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc--C-----------------------CCCccc------cccCchHHHHHHHcCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH--R-----------------------VLPPQL------LLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~--~-----------------------~~p~~~------~~~~p~~~~li~~~L~~d 348 (720)
||++ ||............+.. + ..+..+ ....+...+|+.+||..|
T Consensus 196 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~d 275 (291)
T cd07870 196 EMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMF 275 (291)
T ss_pred HHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcC
Confidence 9999 56543332222211110 0 000000 011234459999999999
Q ss_pred CCCCCChHHHHcCccc
Q 004998 349 PSGRPKMGELLQSEFL 364 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~ 364 (720)
|.+|||+.|++.||||
T Consensus 276 p~~R~t~~~~l~h~~~ 291 (291)
T cd07870 276 PKDRISAQDALLHPYF 291 (291)
T ss_pred cccCcCHHHHhcCCCC
Confidence 9999999999999997
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.1e-29 Score=260.30 Aligned_cols=206 Identities=17% Similarity=0.210 Sum_probs=158.4
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..+|.+++||||+++++ .++... .+|++||| .+++|.+++.+.. ..+++.+++.++.||+.||.|||+.||+
T Consensus 42 ~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~ 117 (277)
T cd05577 42 NEKKILEKVSSRFIVSLAY-AFETKD---DLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIV 117 (277)
T ss_pred HHHHHHHhCCCCCEeeeee-EEecCC---eEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 5778899999999999998 554443 67999999 8899999995433 3589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|+||+++.++.++|+|||.+...... ..
T Consensus 118 H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~---------------------------------~~-------------- 150 (277)
T cd05577 118 YRDLKPENVLLDDHGNVRISDLGLAVELKGG---------------------------------KK-------------- 150 (277)
T ss_pred cCCCCHHHEEECCCCCEEEccCcchhhhccC---------------------------------Cc--------------
Confidence 9999999999999999999998876321100 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....++..|+|||.+.+..++.++|||||||++|+
T Consensus 151 --------------------------------------------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~ 186 (277)
T cd05577 151 --------------------------------------------IKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYE 186 (277)
T ss_pred --------------------------------------------cccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHH
Confidence 001246788999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcC--CCCccccc-cCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHR--VLPPQLLL-KFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~--~~p~~~~~-~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|++ ||....... ....+... ..+..... ..+...+||.+||+.||.+|| ++.+++.||||...
T Consensus 187 l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~ 260 (277)
T cd05577 187 MIAGRSPFRQRKEKV-EKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDL 260 (277)
T ss_pred HhhCCCCCCCCcccc-cHHHHHhccccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcC
Confidence 999 665432210 11111111 11222222 234556999999999999999 88889999999765
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.3e-29 Score=266.05 Aligned_cols=203 Identities=15% Similarity=0.122 Sum_probs=155.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..+++.++||||+++++ ++... ..++++|| .+|+|.+++......+++..++.++.||+.||+|||++||
T Consensus 56 ~~~e~~~l~~l~h~niv~~~g-~~~~~----~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 130 (316)
T cd05108 56 ILDEAYVMASVDNPHVCRLLG-ICLTS----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRL 130 (316)
T ss_pred HHHHHHHHHhCCCCCCCeEEE-EEcCC----CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCe
Confidence 336777999999999999999 44433 35788998 9999999997665568999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++......... +
T Consensus 131 iH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~--------------------------------~------------ 166 (316)
T cd05108 131 VHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKE--------------------------------Y------------ 166 (316)
T ss_pred eccccchhheEecCCCcEEEccccccccccCCCcc--------------------------------e------------
Confidence 99999999999999999999999887443211000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||++.+..++.++|||||||++|
T Consensus 167 --------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~ 202 (316)
T cd05108 167 --------------------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW 202 (316)
T ss_pred --------------------------------------------eccCCccceeecChHHhccCCCCchhhhHHHHHHHH
Confidence 000013466799999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||..... ......+.....++..........+++.+||..+|.+||++.+++.
T Consensus 203 el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~ 263 (316)
T cd05108 203 ELMTFGSKPYDGIPA-SEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELII 263 (316)
T ss_pred HHHcCCCCCCCCCCH-HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9986 5544322 2333333333333333333455669999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-28 Score=256.44 Aligned_cols=198 Identities=16% Similarity=0.242 Sum_probs=155.1
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Q 004998 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 70 ~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
+....+||||+++++ .+.... .+|++||| .|++|.+++.... .+++..+..++.||+.||.|||+.||+|+||+
T Consensus 50 ~~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~ 124 (260)
T cd05611 50 MMIQGESPYVAKLYY-SFQSKD---YLYLVMEYLNGGDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIK 124 (260)
T ss_pred HhhcCCCCCeeeeee-eEEcCC---eEEEEEeccCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 455679999999999 454433 68999999 8999999995543 48999999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccC
Q 004998 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+||+++.++.++|+|||.+......
T Consensus 125 p~nil~~~~~~~~l~dfg~~~~~~~~------------------------------------------------------ 150 (260)
T cd05611 125 PENLLIDQTGHLKLTDFGLSRNGLEN------------------------------------------------------ 150 (260)
T ss_pred HHHeEECCCCcEEEeecccceecccc------------------------------------------------------
Confidence 99999999999999988876321000
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc--
Q 004998 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt-- 306 (720)
....|++.|+|||.+.+..++.++||||||+++|+|++
T Consensus 151 ----------------------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~ 190 (260)
T cd05611 151 ----------------------------------------KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGY 190 (260)
T ss_pred ----------------------------------------ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCC
Confidence 01356888999999988889999999999999999998
Q ss_pred -cCCCCchHHHHHHHhhcC--CCCccccccC-chHHHHHHHcCCCCCCCCCCh---HHHHcCcccCCC
Q 004998 307 -PFSTGEEKTRTMSSLRHR--VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKM---GELLQSEFLNEP 367 (720)
Q Consensus 307 -pf~~~~~~~~~~~~l~~~--~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta---~eiL~hp~~~~~ 367 (720)
||...... .....+... ..++...... +...+||.+||+.+|++||++ .|+|.||||...
T Consensus 191 ~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~ 257 (260)
T cd05611 191 PPFHAETPD-AVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI 257 (260)
T ss_pred CCCCCCCHH-HHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence 66554433 233333222 2233333333 445699999999999999954 799999999765
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=259.50 Aligned_cols=205 Identities=17% Similarity=0.233 Sum_probs=153.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++.+++||||+++++ .+.... .++++||| .+++|..++... ..+++..++.++.||+.||.|||++||+
T Consensus 48 ~~e~~~l~~~~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~ql~~~l~~LH~~~i~ 122 (286)
T cd07847 48 LREIRMLKQLKHPNLVNLIE-VFRRKR---KLHLVFEYCDHTVLNELEKNP-RGVPEHLIKKIIWQTLQAVNFCHKHNCI 122 (286)
T ss_pred HHHHHHHHhCCCCCEeeeee-EEeeCC---EEEEEEeccCccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 36777999999999999999 554443 57999999 777777766443 3599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........
T Consensus 123 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~----------------------------------------------- 155 (286)
T cd07847 123 HRDVKPENILITKQGQIKLCDFGFARILTGPGD----------------------------------------------- 155 (286)
T ss_pred ecCCChhhEEEcCCCcEEECccccceecCCCcc-----------------------------------------------
Confidence 999999999999999999999888733211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
......++.+|+|||.+.+. .++.++|||||||++|
T Consensus 156 -------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~ 192 (286)
T cd07847 156 -------------------------------------------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFA 192 (286)
T ss_pred -------------------------------------------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHH
Confidence 00013468899999998764 4789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc--C------------------CCCc-c--------ccccCchHHHHHHHcCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH--R------------------VLPP-Q--------LLLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~--~------------------~~p~-~--------~~~~~p~~~~li~~~L~~dP~ 350 (720)
||++ ||............... . ..|. . +....+...+|+.+||+++|+
T Consensus 193 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 272 (286)
T cd07847 193 ELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPT 272 (286)
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCcc
Confidence 9999 56544333222211100 0 0000 0 111123345999999999999
Q ss_pred CCCChHHHHcCccc
Q 004998 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+||++.|++.||||
T Consensus 273 ~Rp~~~eil~~~~f 286 (286)
T cd07847 273 ERLSCEELLEHPYF 286 (286)
T ss_pred ccCCHHHHhcCCCC
Confidence 99999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=256.23 Aligned_cols=201 Identities=17% Similarity=0.209 Sum_probs=154.2
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++.+++||||+++++ ++.... .+|++||| .|++|.+++......+++..++.++.||+.||.|||++||+|
T Consensus 48 ~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H 123 (256)
T cd05059 48 EEAKVMMKLSHPNLVQLYG-VCTKQR---PIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIH 123 (256)
T ss_pred HHHHHHHhCCCCCEEEEEE-EEcCCC---ceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5777899999999999999 444433 57999999 899999999655456899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.+||+|||.+.........
T Consensus 124 ~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~----------------------------------------------- 156 (256)
T cd05059 124 RDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT----------------------------------------------- 156 (256)
T ss_pred ccccHhhEEECCCCcEEECCcccceeccccccc-----------------------------------------------
Confidence 999999999999999999998877432111000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
+ .....++..|+|||.+.+..++.++|||||||++|||
T Consensus 157 ~------------------------------------------~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l 194 (256)
T cd05059 157 S------------------------------------------SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEV 194 (256)
T ss_pred c------------------------------------------cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHH
Confidence 0 0001234579999999988899999999999999999
Q ss_pred cc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 305 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 305 lt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++ ||...... .....+.....++......+...+++.+||+.+|++|||+.++++
T Consensus 195 ~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~ 253 (256)
T cd05059 195 FSEGKMPYERFSNS-EVVESVSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLS 253 (256)
T ss_pred hccCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 97 55443332 333444433222222223344559999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.3e-29 Score=258.53 Aligned_cols=204 Identities=21% Similarity=0.265 Sum_probs=158.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+...|..++++++||||+++++ .+.... ..+++||| .+++|.+++. .....+++..++.++.||+.||.|||
T Consensus 48 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH 123 (267)
T cd08228 48 DCVKEIDLLKQLNHPNVIKYLD-SFIEDN---ELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH 123 (267)
T ss_pred HHHHHHHHHHhCCCcceeeeee-eEEECC---eEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh
Confidence 3446788999999999999999 444432 57999999 8899999883 23345899999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+|+||||+||+++.++.++++|||.+........
T Consensus 124 ~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~------------------------------------------ 161 (267)
T cd08228 124 SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT------------------------------------------ 161 (267)
T ss_pred hCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhH------------------------------------------
Confidence 99999999999999999999999999887733211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......|++.|+|||.+.+..++.++||||||
T Consensus 162 ------------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG 193 (267)
T cd08228 162 ------------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLG 193 (267)
T ss_pred ------------------------------------------------HHhcCCCCccccChhhhccCCCCchhhHHHHH
Confidence 00013578899999999888899999999999
Q ss_pred hhhhhccc---cCCCCc-hHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 299 VLLFELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~-~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|||++ ||.... ........+.....++......+ ...+|+.+||..+|++||++.++++
T Consensus 194 ~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 194 CLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred HHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 99999998 554432 22334444444445554443444 4569999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.7e-29 Score=270.94 Aligned_cols=211 Identities=16% Similarity=0.230 Sum_probs=159.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCC---CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~---~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..+|..+|.+++||||+++++ ++..... ...+++||||.|++|.+++.. ..+++..++.++.||+.||.|||+.
T Consensus 61 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~ 137 (343)
T cd07880 61 AYRELRLLKHMKHENVIGLLD-VFTPDLSLDRFHDFYLVMPFMGTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAA 137 (343)
T ss_pred HHHHHHHHHhcCCCCccceee-eecCCccccccceEEEEEecCCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 336788999999999999999 4443322 234799999988899998854 3489999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.++++|||.+......
T Consensus 138 gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~---------------------------------------------- 171 (343)
T cd07880 138 GIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE---------------------------------------------- 171 (343)
T ss_pred CeecCCCCHHHEEEcCCCCEEEeecccccccccC----------------------------------------------
Confidence 9999999999999999999999999877321100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGv 299 (720)
.....+++.|+|||.+.+. .++.++|||||||
T Consensus 172 -----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ 204 (343)
T cd07880 172 -----------------------------------------------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGC 204 (343)
T ss_pred -----------------------------------------------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHH
Confidence 0013568899999998763 4889999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCC-------------------------Ccc---c-cccCchHHHHHHHcCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVL-------------------------PPQ---L-LLKFPKEASFCLWLLHP 347 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~-------------------------p~~---~-~~~~p~~~~li~~~L~~ 347 (720)
++|+|++ ||............+..... +.. + ....+...+++.+||+.
T Consensus 205 ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~ 284 (343)
T cd07880 205 IMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVL 284 (343)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCC
Confidence 9999999 56544332222211110000 000 1 11223445999999999
Q ss_pred CCCCCCChHHHHcCcccCCCccc
Q 004998 348 EPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
||.+|||+.+++.||||......
T Consensus 285 dP~~R~t~~~~l~~~~~~~~~~~ 307 (343)
T cd07880 285 DAESRITAAEALAHPYFEEFHDP 307 (343)
T ss_pred ChhhCCCHHHHhcCccHhhhcCc
Confidence 99999999999999999986443
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.3e-29 Score=257.05 Aligned_cols=201 Identities=17% Similarity=0.216 Sum_probs=148.4
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++..++||||+++++ ++..+. ..++|||| .+++|.+++......+++..++.++.||+.||.|||++||+|
T Consensus 48 ~e~~~l~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH 123 (258)
T cd05078 48 EAASMMSQLSHKHLVLNYG-VCVCGD---ESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTH 123 (258)
T ss_pred HHHHHHHhCCCCChhheee-EEEeCC---CcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 5667889999999999999 444433 46899999 899999999665556899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++..++.+++.. +++|||++.....
T Consensus 124 ~dlkp~nili~~~~~~~~~~~~~~-------------------------------------~l~d~g~~~~~~~------ 160 (258)
T cd05078 124 GNVCAKNVLLIREEDRKTGNPPFI-------------------------------------KLSDPGISITVLP------ 160 (258)
T ss_pred CCCccceEEEecccccccCCCceE-------------------------------------EecccccccccCC------
Confidence 999999999998776544333221 2345544321110
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~e 303 (720)
.....+++.|+|||++.+. .++.++|||||||++||
T Consensus 161 -------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~ 197 (258)
T cd05078 161 -------------------------------------------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWE 197 (258)
T ss_pred -------------------------------------------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHH
Confidence 0013567889999999874 47999999999999999
Q ss_pred cccc----CCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFCP----FSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Lltp----f~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+++ |...... ........ ..+|+ ..+++..+|+.+||+.||++|||+++|++
T Consensus 198 l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~il~ 255 (258)
T cd05078 198 IFSGGDKPLSALDSQ-KKLQFYEDRHQLPA---PKWTELANLINQCMDYEPDFRPSFRAIIR 255 (258)
T ss_pred HHcCCCCChhhccHH-HHHHHHHccccCCC---CCcHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 9993 2222221 11211111 12222 34466779999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-29 Score=260.37 Aligned_cols=207 Identities=19% Similarity=0.254 Sum_probs=161.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ .+.++. .+|+|||| .|++|.+++... ++++..+..++.||+.||+|||+.|
T Consensus 48 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~lh~~~ 121 (277)
T cd06640 48 DIQQEITVLSQCDSPYVTKYYG-SYLKGT---KLWIIMEYLGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLHSEK 121 (277)
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEEECC---EEEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446777899999999999999 554443 68999999 899999999543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++++|||.+....... .
T Consensus 122 ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~----------------------------------~----------- 156 (277)
T cd06640 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ----------------------------------I----------- 156 (277)
T ss_pred ccCcCCChhhEEEcCCCCEEEcccccceeccCCc----------------------------------c-----------
Confidence 9999999999999999999999988773321100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++|+|||||++
T Consensus 157 ---------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il 191 (277)
T cd06640 157 ---------------------------------------------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITA 191 (277)
T ss_pred ---------------------------------------------ccccccCcccccCHhHhccCCCccHHHHHHHHHHH
Confidence 00013568899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++ ||...... .....+... .++.+.... +...+|+.+||+.+|++||++.++++||||...
T Consensus 192 ~el~tg~~p~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06640 192 IELAKGEPPNSDMHPM-RVLFLIPKN-NPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKN 259 (277)
T ss_pred HHHHHCCCCCCCcChH-hHhhhhhcC-CCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhc
Confidence 99999 45433322 222222222 233333333 344599999999999999999999999999765
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=256.27 Aligned_cols=200 Identities=19% Similarity=0.208 Sum_probs=153.4
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..+|..++||||+++++ ++..+. .++++||| .+++|.+++.. ....+++..++.++.||+.||.|||++|++
T Consensus 51 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~ 126 (263)
T cd05052 51 KEAAVMKEIKHPNLVQLLG-VCTREP---PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFI 126 (263)
T ss_pred HHHHHHHhCCCCChhheEE-EEcCCC---CcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 5777899999999999999 444433 57999999 89999999954 334589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||++++++.++|+|||.+.........
T Consensus 127 H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~---------------------------------------------- 160 (263)
T cd05052 127 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT---------------------------------------------- 160 (263)
T ss_pred ecccCcceEEEcCCCcEEeCCCccccccccceee----------------------------------------------
Confidence 9999999999999999999988887332111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||.+.+..++.++|||||||++||
T Consensus 161 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e 197 (263)
T cd05052 161 -------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE 197 (263)
T ss_pred -------------------------------------------ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHH
Confidence 0000123567999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||..... ......+..... +...... +...+|+.+||..+|++||++.++++
T Consensus 198 l~t~g~~p~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 198 IATYGMSPYPGIDL-SQVYELLEKGYR-MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred HHcCCCCCCCCCCH-HHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 997 5554332 233344443322 2233333 44559999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.9e-29 Score=256.87 Aligned_cols=217 Identities=17% Similarity=0.216 Sum_probs=163.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++.+++||||+++++ .+..+ ..+|++||| .+++|.+++.+.+ .+++..++.++.||+.||.|||++|
T Consensus 39 ~~~~e~~~l~~~~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~ 113 (265)
T cd05579 39 QVLTERDILSQAQSPYVVKLYY-SFQGK---KNLYLVMEYLPGGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHSNG 113 (265)
T ss_pred HHHHHHHHHHhCCCcchhHHHH-heecC---cEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 3346677899999999999999 44443 267999999 7899999996544 5999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.++|+|||++......... .. .
T Consensus 114 i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~-------------------------------~~------~---- 152 (265)
T cd05579 114 IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQI-------------------------------NL------N---- 152 (265)
T ss_pred eecCCCCHHHeEEcCCCCEEEEecccchhcccCccc-------------------------------cc------c----
Confidence 999999999999999999999999987432111000 00 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
..........++..|+|||.+.+..++.++|||||||++
T Consensus 153 -----------------------------------------~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~ 191 (265)
T cd05579 153 -----------------------------------------DDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCIL 191 (265)
T ss_pred -----------------------------------------cccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHH
Confidence 000000114578899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCC-ccccccCchHHHHHHHcCCCCCCCCCCh---HHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKM---GELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~~~~p~~~~li~~~L~~dP~~Rpta---~eiL~hp~~~~~ 367 (720)
|+|++ ||...... .....+..+.++ +......+...+|+.+||+.+|.+|||+ .++|+||||+..
T Consensus 192 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~ 263 (265)
T cd05579 192 YEFLVGIPPFHGETPE-EIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI 263 (265)
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence 99999 66544433 233333332222 2221123455699999999999999999 999999999864
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.7e-29 Score=269.10 Aligned_cols=209 Identities=16% Similarity=0.248 Sum_probs=157.2
Q ss_pred eehhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
.+|..++.+++||||+++++ ++.... ....+|++|||...+|.+++. ..+++..+..++.||+.||.|||++|
T Consensus 62 ~~e~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ 137 (342)
T cd07879 62 YRELTLLKHMQHENVIGLLD-VFTSAVSGDEFQDFYLVMPYMQTDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSAG 137 (342)
T ss_pred HHHHHHHHhcCCCCccchhh-eecccccCCCCceEEEEecccccCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 46788999999999999999 443322 223579999996678888762 24899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||++......
T Consensus 138 i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~----------------------------------------------- 170 (342)
T cd07879 138 IIHRDLKPGNLAVNEDCELKILDFGLARHADAE----------------------------------------------- 170 (342)
T ss_pred cccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC-----------------------------------------------
Confidence 999999999999999999999999877321000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvl 300 (720)
.....+++.|+|||.+.+. .++.++|||||||+
T Consensus 171 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvi 204 (342)
T cd07879 171 ----------------------------------------------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCI 204 (342)
T ss_pred ----------------------------------------------CCCceeeecccChhhhcCccccCchHHHHHHHHH
Confidence 0013568899999998764 48999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcC------------------------CCC-cc----ccccCchHHHHHHHcCCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHR------------------------VLP-PQ----LLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~------------------------~~p-~~----~~~~~p~~~~li~~~L~~d 348 (720)
+|||++ ||............+... ..+ .. +....+...+|+.+||+.|
T Consensus 205 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d 284 (342)
T cd07879 205 MAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELD 284 (342)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCC
Confidence 999999 665543222111111100 000 00 1122334569999999999
Q ss_pred CCCCCChHHHHcCcccCCCccc
Q 004998 349 PSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|.+||++.+++.||||......
T Consensus 285 P~~R~~~~e~l~h~~f~~~~~~ 306 (342)
T cd07879 285 VDKRLTATEALEHPYFDSFRDA 306 (342)
T ss_pred hhhCcCHHHHhcCcchhhcccc
Confidence 9999999999999999987553
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-29 Score=262.07 Aligned_cols=207 Identities=18% Similarity=0.221 Sum_probs=159.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ ++.... .+|+|||| .+++|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 48 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~ 121 (277)
T cd06642 48 DIQQEITVLSQCDSPYITRYYG-SYLKGT---KLWIIMEYLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSER 121 (277)
T ss_pred HHHHHHHHHHcCCCCccHhhhc-ccccCC---ceEEEEEccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 3447788999999999999999 444433 57999999 88999998854 34899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.++++|||++....... .
T Consensus 122 ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~----------------------------------~----------- 156 (277)
T cd06642 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ----------------------------------I----------- 156 (277)
T ss_pred eeccCCChheEEEeCCCCEEEccccccccccCcc----------------------------------h-----------
Confidence 9999999999999999999999888773221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||.+.+..++.++|||||||++
T Consensus 157 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il 191 (277)
T cd06642 157 ---------------------------------------------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITA 191 (277)
T ss_pred ---------------------------------------------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHH
Confidence 00013578899999999888899999999999999
Q ss_pred hhcccc---CCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFCP---FSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLltp---f~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||+++ |...... .....+... .++.+....+ ...+|+.+||+.+|.+||++.++++||||...
T Consensus 192 ~el~tg~~p~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06642 192 IELAKGEPPNSDLHPM-RVLFLIPKN-SPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRY 259 (277)
T ss_pred HHHHhCCCCCcccchh-hHHhhhhcC-CCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHH
Confidence 999994 4322222 112222222 2333333333 34599999999999999999999999998764
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=261.97 Aligned_cols=209 Identities=16% Similarity=0.229 Sum_probs=157.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
.|..++.+++||||+++++ ++.+. ..+++||||.+++|.+++......+++..++.++.||+.||.|||++||+|+
T Consensus 51 ~e~~~l~~~~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~ 126 (298)
T cd07841 51 REIKLLQELKHPNIIGLLD-VFGHK---SNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHR 126 (298)
T ss_pred HHHHHHhhcCCCCChhhhh-eeecC---CEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence 5777899999999999999 55443 2679999998889999996554469999999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+||+++.++.++|+|||.+...+....
T Consensus 127 dl~p~nill~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------- 157 (298)
T cd07841 127 DLKPNNLLIASDGVLKLADFGLARSFGSPNR------------------------------------------------- 157 (298)
T ss_pred CCChhhEEEcCCCCEEEccceeeeeccCCCc-------------------------------------------------
Confidence 9999999999999999999888743321100
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhhhc
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~eL 304 (720)
......+++.|+|||.+.+. .++.++|||||||++|||
T Consensus 158 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~ 196 (298)
T cd07841 158 -----------------------------------------KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAEL 196 (298)
T ss_pred -----------------------------------------cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence 00012457889999998654 478999999999999999
Q ss_pred ccc---CCCCchHHHHHHHhhcCC-C---------------------Ccc-----ccccCchHHHHHHHcCCCCCCCCCC
Q 004998 305 FCP---FSTGEEKTRTMSSLRHRV-L---------------------PPQ-----LLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 305 ltp---f~~~~~~~~~~~~l~~~~-~---------------------p~~-----~~~~~p~~~~li~~~L~~dP~~Rpt 354 (720)
+++ |...... .....+.... . ++. +........+||.+||.++|++|||
T Consensus 197 ~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s 275 (298)
T cd07841 197 LLRVPFLPGDSDI-DQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRIT 275 (298)
T ss_pred HcCCccccCCccH-HHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcC
Confidence 993 3322221 1111111000 0 000 0111234458999999999999999
Q ss_pred hHHHHcCcccCCCcc
Q 004998 355 MGELLQSEFLNEPRD 369 (720)
Q Consensus 355 a~eiL~hp~~~~~~~ 369 (720)
+.|+|+||||.+...
T Consensus 276 ~~e~l~~~~~~~~~~ 290 (298)
T cd07841 276 ARQALEHPYFSNDPA 290 (298)
T ss_pred HHHHhhCccccCCCC
Confidence 999999999998643
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=258.59 Aligned_cols=203 Identities=17% Similarity=0.174 Sum_probs=156.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-------------CCCCHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------------RSVDVYECLHIFRQI 130 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-------------~~l~~~~~~~i~~QI 130 (720)
.+|..+|..++||||+++++ ++... ...+++||| .+++|.++|...+ ..+++..+..++.||
T Consensus 56 ~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i 131 (280)
T cd05049 56 EREAELLTNFQHENIVKFYG-VCTEG---DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQI 131 (280)
T ss_pred HHHHHHHHhcCCCCchheee-EEecC---CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHH
Confidence 36777899999999999999 44444 368999999 9999999995432 347889999999999
Q ss_pred HHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccc
Q 004998 131 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 131 l~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
+.||.|||++|++||||||+||+++.++.++|+|||.+....... .+
T Consensus 132 ~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~---------------------------------~~ 178 (280)
T cd05049 132 ASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTD---------------------------------YY 178 (280)
T ss_pred HHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCc---------------------------------ce
Confidence 999999999999999999999999999999999998874321110 00
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCc
Q 004998 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 290 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~ 290 (720)
. ......+++.|+|||++.+..++.
T Consensus 179 ~-------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~ 203 (280)
T cd05049 179 R-------------------------------------------------------VGGHTMLPIRWMPPESIMYRKFTT 203 (280)
T ss_pred e-------------------------------------------------------cCCCCcccceecChhhhccCCcch
Confidence 0 000124578899999999988999
Q ss_pred cccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 291 ASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|||||||++|||++ ||...... .....+..+..++......+...+|+.+||..||.+||++.|+++
T Consensus 204 ~~Di~slG~il~e~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 204 ESDVWSFGVVLWEIFTYGKQPWYGLSNE-EVIECITQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred hhhHHHHHHHHHHHHhcCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999999997 55443332 344444444443332233345569999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.6e-29 Score=259.05 Aligned_cols=202 Identities=16% Similarity=0.218 Sum_probs=152.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..++.+++||||+++++ .+.... .+|+|||| .+++|.+++... ..+++..+..++.||+.||.|||+.||+|
T Consensus 55 ~e~~~l~~~~h~~ii~~~~-~~~~~~---~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 129 (267)
T cd06646 55 QEIFMVKECKHCNIVAYFG-SYLSRE---KLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSKGKMH 129 (267)
T ss_pred HHHHHHHhcCCCCeeeeeE-EEEeCC---EEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 6778999999999999999 444432 57999999 889999998544 35899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.++|+|||.+........
T Consensus 130 ~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~------------------------------------------------ 161 (267)
T cd06646 130 RDIKGANILLTDNGDVKLADFGVAAKITATIA------------------------------------------------ 161 (267)
T ss_pred cCCCHHHEEECCCCCEEECcCccceeeccccc------------------------------------------------
Confidence 99999999999999999999888733211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC---CCCCccccchhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGVLL 301 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDIwSLGvll 301 (720)
......|++.|+|||.+.+ ..++.++|||||||++
T Consensus 162 ------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il 199 (267)
T cd06646 162 ------------------------------------------KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITA 199 (267)
T ss_pred ------------------------------------------ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHH
Confidence 0001357889999999853 3378899999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCC-CCccc--cccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRV-LPPQL--LLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~-~p~~~--~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
|||++ ||........ ...+.... .++.+ ...++ ...+|+.+||..+|++|||++++|+|+|
T Consensus 200 ~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 200 IELAELQPPMFDLHPMRA-LFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred HHHHhCCCCccccchhhh-heeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 99999 4433222211 11111111 22222 12233 4459999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=259.41 Aligned_cols=205 Identities=22% Similarity=0.230 Sum_probs=157.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC----------------CCCCCHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----------------KRSVDVYECLHI 126 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~----------------~~~l~~~~~~~i 126 (720)
..+|..++++++||||+++++ ++..+. ..|++||| .+++|.+++... ...+++..+..+
T Consensus 54 ~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 129 (283)
T cd05090 54 FQQEASLMAELHHPNIVCLLG-VVTQEQ---PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHI 129 (283)
T ss_pred HHHHHHHHhhCCCCCeeeEEE-EEecCC---ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHH
Confidence 346778999999999999999 444443 57999999 889999998422 124788999999
Q ss_pred HHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004998 127 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 127 ~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
+.||+.||.|||++||+||||||+|||++.++.++|+|||++......
T Consensus 130 ~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~-------------------------------- 177 (283)
T cd05090 130 AIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSA-------------------------------- 177 (283)
T ss_pred HHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCC--------------------------------
Confidence 999999999999999999999999999999999999999887432111
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004998 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
++.. ......++..|+|||.+.+.
T Consensus 178 --~~~~------------------------------------------------------~~~~~~~~~~y~aPE~~~~~ 201 (283)
T cd05090 178 --DYYR------------------------------------------------------VQPKSLLPIRWMPPEAIMYG 201 (283)
T ss_pred --ccee------------------------------------------------------cccCCCccceecChHHhccC
Confidence 0000 00012356789999999888
Q ss_pred CCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
.++.++|||||||++|||++ ||..... ...+..+.....++......+...+++.+||+.||.+||++.+|+++
T Consensus 202 ~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~ 279 (283)
T cd05090 202 KFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-QEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR 279 (283)
T ss_pred CCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 89999999999999999997 5655433 24445555444443333333455699999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=260.07 Aligned_cols=202 Identities=17% Similarity=0.212 Sum_probs=154.2
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccC
Q 004998 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 69 ~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.++...+||||+.+++ .+.... .+|+|||| .|++|.+++...+ .+++..++.++.|++.||.|||+.||+||||
T Consensus 49 ~~~~~~~~~~i~~~~~-~~~~~~---~~~~v~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di 123 (278)
T cd05606 49 SLVSTGDCPFIVCMSY-AFHTPD---KLSFILDLMNGGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHMHNRFVVYRDL 123 (278)
T ss_pred HHHHhCCCCcEeeeee-eeecCC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCC
Confidence 3455678999999998 454443 57999999 8999999995543 5999999999999999999999999999999
Q ss_pred CCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccccc
Q 004998 148 RPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 148 KP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q 227 (720)
||+||+++.++.++|+|||.+..+...
T Consensus 124 ~p~nili~~~~~~kl~dfg~~~~~~~~----------------------------------------------------- 150 (278)
T cd05606 124 KPANILLDEHGHVRISDLGLACDFSKK----------------------------------------------------- 150 (278)
T ss_pred CHHHEEECCCCCEEEccCcCccccCcc-----------------------------------------------------
Confidence 999999999999999999877322100
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhhhccc
Q 004998 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~eLlt 306 (720)
......|+..|+|||.+.+. .++.++||||+||++|||++
T Consensus 151 ---------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~ 191 (278)
T cd05606 151 ---------------------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR 191 (278)
T ss_pred ---------------------------------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHh
Confidence 00013578999999999754 58999999999999999999
Q ss_pred ---cCCCCchH-HHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCCc
Q 004998 307 ---PFSTGEEK-TRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 368 (720)
Q Consensus 307 ---pf~~~~~~-~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~~ 368 (720)
||...... .......... .++.++.. .+...+++.+||..+|.+|| ++.++++||||....
T Consensus 192 g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 192 GHSPFRQHKTKDKHEIDRMTLT-MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred CCCCCCCCCccchHHHHHHhhc-cCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 66543111 1111111111 12222222 34556999999999999999 999999999998863
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=266.92 Aligned_cols=218 Identities=16% Similarity=0.143 Sum_probs=158.5
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.++ +||||+++++...........+|++|||.+++|.+++... ..+++..++.++.||+.||.|||++||+
T Consensus 49 ~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~giv 127 (332)
T cd07857 49 LRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELMEADLHQIIRSG-QPLTDAHFQSFIYQILCGLKYIHSANVL 127 (332)
T ss_pred HHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEecccCCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 3577788888 5999999998443333334468999999778999999543 4599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+......... .
T Consensus 128 H~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~-------------- 162 (332)
T cd07857 128 HRDLKPGNLLVNADCELKICDFGLARGFSENPGE-------------------------------N-------------- 162 (332)
T ss_pred cCCCCHHHeEEcCCCCEEeCcCCCceeccccccc-------------------------------c--------------
Confidence 9999999999999999999999987443111000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~ 302 (720)
........||+.|+|||.+.+ ..++.++|||||||++|
T Consensus 163 -----------------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~ 201 (332)
T cd07857 163 -----------------------------------------AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILA 201 (332)
T ss_pred -----------------------------------------cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHH
Confidence 000011468999999998866 45899999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhh-----------------------c--CCCCc----cccccCchHHHHHHHcCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLR-----------------------H--RVLPP----QLLLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~-----------------------~--~~~p~----~~~~~~p~~~~li~~~L~~dP~ 350 (720)
+|++ ||............+. . ..... ......+...+|+.+||++||.
T Consensus 202 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~ 281 (332)
T cd07857 202 ELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPT 281 (332)
T ss_pred HHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcc
Confidence 9998 4543322111100000 0 00000 1111234556999999999999
Q ss_pred CCCChHHHHcCcccCCCcc
Q 004998 351 GRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||+.+++.||||....+
T Consensus 282 ~R~t~~~ll~~~~~~~~~~ 300 (332)
T cd07857 282 KRISVEEALEHPYLAIWHD 300 (332)
T ss_pred cCCCHHHHhcChhhhhhcC
Confidence 9999999999999986644
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=258.51 Aligned_cols=209 Identities=17% Similarity=0.143 Sum_probs=154.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++||||+++++ ++... ....++++||| .|++|.+++.+....+++..+..++.||+.||+|||++|
T Consensus 52 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~-~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~g 129 (284)
T cd05079 52 DLKKEIEILRNLYHENIVKYKG-ICTED-GGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQ 129 (284)
T ss_pred HHHHHHHHHHhCCCCCeeeeee-EEecC-CCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457788999999999999999 44433 12357999999 899999999655456899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+........ .
T Consensus 130 i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~---------------------------------~----------- 165 (284)
T cd05079 130 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE---------------------------------Y----------- 165 (284)
T ss_pred eeecccchheEEEcCCCCEEECCCccccccccCcc---------------------------------c-----------
Confidence 99999999999999999999999888743211100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. . ......++..|+|||.+.+..++.++|||||||++
T Consensus 166 -~----------------------~--------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il 202 (284)
T cd05079 166 -Y----------------------T--------------------VKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTL 202 (284)
T ss_pred -e----------------------e--------------------ecCCCCCCccccCHHHhccCCCCccccchhhhhhh
Confidence 0 0 00012457789999999888899999999999999
Q ss_pred hhccccCCCC-----------------chHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFCPFSTG-----------------EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLltpf~~~-----------------~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||+++..+. .........+......+......+...+|+.+||+.+|.+|||+.++++
T Consensus 203 ~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 278 (284)
T cd05079 203 YELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIE 278 (284)
T ss_pred hhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 9999821110 0011111222222222222233445669999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=254.63 Aligned_cols=210 Identities=20% Similarity=0.245 Sum_probs=159.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
....|..++.+++||||+++++ ++... ..+++++|| .+++|.+++.+. ..+++..++.++.||+.||.|||+.|
T Consensus 45 ~~~~e~~~~~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~ 119 (264)
T cd06626 45 EIADEMKVLELLKHPNLVKYYG-VEVHR---EKVYIFMEYCSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSHG 119 (264)
T ss_pred HHHHHHHHHHhCCCCChhheee-eEecC---CEEEEEEecCCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHCC
Confidence 3346777999999999999999 44333 368999999 899999999654 34899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.++|+|||.+.......... ..+
T Consensus 120 i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~-----------------------------~~~----------- 159 (264)
T cd06626 120 IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM-----------------------------GEE----------- 159 (264)
T ss_pred cccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc-----------------------------ccc-----------
Confidence 9999999999999999999999998874432210000 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC---CCccccchhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwSLG 298 (720)
.....+++.|+|||.+.+.. ++.++||||||
T Consensus 160 ----------------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G 193 (264)
T cd06626 160 ----------------------------------------------VQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLG 193 (264)
T ss_pred ----------------------------------------------ccCCcCCcCccChhhccCCCCCCCCcccchHHHH
Confidence 00135688999999998766 89999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccccc---cCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL---KFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~---~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|++|+|++ ||............+.... ++.++. ..+...+|+.+||+.+|.+|||+.+++.|||+
T Consensus 194 ~il~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 194 CVVLEMATGKRPWSELDNEFQIMFHVGAGH-KPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHHHHhCCCCccCCcchHHHHHHHhcCC-CCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 99999999 6654433322222232222 222222 13555699999999999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=255.45 Aligned_cols=204 Identities=17% Similarity=0.182 Sum_probs=152.0
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+++.++||||+++++ ++.... ...+++||| .+++|.+++.+....+++..+..++.||+.||.|||+.||+|
T Consensus 45 ~e~~~l~~l~h~~iv~~~~-~~~~~~--~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 121 (262)
T cd05058 45 KEGIIMKDFSHPNVLSLLG-ICLPSE--GSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVH 121 (262)
T ss_pred HHHHHHccCCCCCcceEEE-EeecCC--CCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 5677899999999999999 443222 246899999 999999999665555788889999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||+++...... .+.+.
T Consensus 122 ~dlk~~nili~~~~~~kl~dfg~~~~~~~~~---------------------------------~~~~~----------- 157 (262)
T cd05058 122 RDLAARNCMLDESFTVKVADFGLARDIYDKE---------------------------------YYSVH----------- 157 (262)
T ss_pred cccCcceEEEcCCCcEEECCccccccccCCc---------------------------------ceeec-----------
Confidence 9999999999999999999998874321110 00000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
......+++.|+|||.+.+..++.++|||||||++|||
T Consensus 158 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el 195 (262)
T cd05058 158 ------------------------------------------NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 195 (262)
T ss_pred ------------------------------------------ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHH
Confidence 00012356789999999888899999999999999999
Q ss_pred cc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 305 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 305 lt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++ ||...... .....+..+..++. ....| ...+++.+||+++|++||++.++++
T Consensus 196 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 196 MTRGAPPYPDVDSF-DITVYLLQGRRLLQ-PEYCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred HcCCCCCCCCCCHH-HHHHHHhcCCCCCC-CCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 98 33333322 23333333322222 22233 4559999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.9e-30 Score=256.03 Aligned_cols=207 Identities=14% Similarity=0.208 Sum_probs=166.2
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+-|+.+.+.|+||++|+.+|... .+|+|||| +.|++.+.++....++++.++..+++..+.||.|||...-||
T Consensus 77 KEISIMQQC~S~yVVKYYGSYFK~s----DLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIH 152 (502)
T KOG0574|consen 77 KEISIMQQCKSKYVVKYYGSYFKHS----DLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIH 152 (502)
T ss_pred HHHHHHHHcCCchhhhhhhhhccCC----ceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 6778999999999999999666544 47999999 789999999877888999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||..|||++-+|+.||+|||.+-.. +|- +
T Consensus 153 RDIKAGNILLNT~G~AKLADFGVAGQL------------------------------------TDT-M------------ 183 (502)
T KOG0574|consen 153 RDIKAGNILLNTDGIAKLADFGVAGQL------------------------------------TDT-M------------ 183 (502)
T ss_pred hhcccccEEEcccchhhhhhccccchh------------------------------------hhh-H------------
Confidence 999999999999999999999988221 110 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.+....+|||.|||||++..-.|.+.+||||||++..||
T Consensus 184 -----------------------------------------AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEM 222 (502)
T KOG0574|consen 184 -----------------------------------------AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEM 222 (502)
T ss_pred -----------------------------------------HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhh
Confidence 011236899999999999999999999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCccc--cccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 305 FC---PFSTGEEKTRTMSSLRHRVLPPQL--LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~~~--~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
.. ||....+. +++-.+-. ..||.+ +..|+... ||++.||.+.|++|.||.++++|||++...
T Consensus 223 AEG~PPYsDIHPM-RAIFMIPT-~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~ 290 (502)
T KOG0574|consen 223 AEGRPPYSDIHPM-RAIFMIPT-KPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAP 290 (502)
T ss_pred hcCCCCccccccc-ceeEeccC-CCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCC
Confidence 98 44333222 11111111 223333 23555544 999999999999999999999999999863
|
|
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=260.13 Aligned_cols=205 Identities=17% Similarity=0.182 Sum_probs=156.5
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---------------CCCCCCHHHHHHH
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---------------PKRSVDVYECLHI 126 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---------------~~~~l~~~~~~~i 126 (720)
..+|..++.++ +||||+++++ ++.... .++++||| .+++|.+++.. ....+++..++.+
T Consensus 62 ~~~E~~~l~~l~~h~~i~~~~~-~~~~~~---~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i 137 (293)
T cd05053 62 LVSEMEMMKMIGKHKNIINLLG-VCTQEG---PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSF 137 (293)
T ss_pred HHHHHHHHHhhcCCCCeeeEEE-EEcCCC---CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHH
Confidence 33677788888 8999999999 444432 57999999 89999999942 2345899999999
Q ss_pred HHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004998 127 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 127 ~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
+.||+.||+|||+.||+||||||+||+++.++.++|+|||.+.........
T Consensus 138 ~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~----------------------------- 188 (293)
T cd05053 138 AYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYY----------------------------- 188 (293)
T ss_pred HHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccce-----------------------------
Confidence 999999999999999999999999999999999999999887432111000
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004998 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
. ......++..|+|||++.+.
T Consensus 189 ----------------~-------------------------------------------~~~~~~~~~~y~aPE~~~~~ 209 (293)
T cd05053 189 ----------------R-------------------------------------------KTTNGRLPVKWMAPEALFDR 209 (293)
T ss_pred ----------------e-------------------------------------------ccCCCCCCccccCHHHhccC
Confidence 0 00001235679999999888
Q ss_pred CCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
.++.++|||||||++|||++ ||..... ......+.....++......+...+|+.+||.++|.+|||+.|++++
T Consensus 210 ~~~~~~Di~slG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 210 VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV-EELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred CcCcccceeehhhHHHHHhcCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 89999999999999999987 5554433 23444444444333333344556699999999999999999999873
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-28 Score=258.88 Aligned_cols=204 Identities=14% Similarity=0.107 Sum_probs=153.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------CCCCHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------RSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------~~l~~~~~~~i~~QIl~aL 134 (720)
.+|..++..++||||+++++ ++.... ..+++||| .+++|.+++.+.. ..++...+..++.||+.||
T Consensus 57 ~~e~~~l~~l~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 132 (277)
T cd05062 57 LNEASVMKEFNCHHVVRLLG-VVSQGQ---PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGM 132 (277)
T ss_pred HHHHHHHHhCCCCCeeeEEE-EEcCCC---CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHH
Confidence 36778899999999999999 554333 57999999 9999999994321 2357788999999999999
Q ss_pred HHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
.|||+.|++|+||||+||+++.++.++++|||++.........
T Consensus 133 ~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~------------------------------------- 175 (277)
T cd05062 133 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY------------------------------------- 175 (277)
T ss_pred HHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCccee-------------------------------------
Confidence 9999999999999999999999999999998887432111000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
.......+++.|+|||++.+..++.++||
T Consensus 176 ---------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 204 (277)
T cd05062 176 ---------------------------------------------------RKGGKGLLPVRWMSPESLKDGVFTTYSDV 204 (277)
T ss_pred ---------------------------------------------------ecCCCCccCHhhcChhHhhcCCcCchhHH
Confidence 00001245778999999998889999999
Q ss_pred hhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||||++|||++ ||...... .....+.....++......+...+|+.+||+.+|++|||+.|++++
T Consensus 205 ~slG~~l~el~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 205 WSFGVVLWEIATLAEQPYQGMSNE-QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999997 55544332 3333333333332222223345699999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-28 Score=255.54 Aligned_cols=205 Identities=18% Similarity=0.232 Sum_probs=158.3
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++++++||||+++++ .+.... ..|+++|| .+++|.+++.. ....+++..++.++.||+.||.|||+.||
T Consensus 47 ~~E~~~l~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i 122 (257)
T cd08225 47 KKEVILLAKMKHPNIVTFFA-SFQENG---RLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKI 122 (257)
T ss_pred HHHHHHHHhCCCCChhhhhh-eeccCC---eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 36778999999999999999 454443 67999999 89999999944 33358999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCc-eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 143 VVHNVRPSCFVMSSFNH-VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~-vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
+|+||||+||+++.++. ++++|||.+...+.. .+.
T Consensus 123 ~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~---------------------------------~~~----------- 158 (257)
T cd08225 123 LHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS---------------------------------MEL----------- 158 (257)
T ss_pred ccccCCHHHEEEcCCCCeEEecccccchhccCC---------------------------------ccc-----------
Confidence 99999999999997754 699888876332111 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....|++.|+|||.+.+..++.++|+|||||++
T Consensus 159 ----------------------------------------------~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il 192 (257)
T cd08225 159 ----------------------------------------------AYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVL 192 (257)
T ss_pred ----------------------------------------------ccccCCCccccCHHHHcCCCCCchhhHHHHHHHH
Confidence 0013578899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|||++ ||......... ..+.....++..........+++.+||..+|++|||+.++++||||
T Consensus 193 ~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 193 YELCTLKHPFEGNNLHQLV-LKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHhCCCCCCCccHHHHH-HHHhcccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 99998 55544333222 2333333333322233455699999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.8e-29 Score=261.22 Aligned_cols=209 Identities=17% Similarity=0.147 Sum_probs=154.7
Q ss_pred eeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh----CCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD----KPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 64 ~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~----~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
...|..++.++. ||||+++++. +..+. ..+++|||.+++|.++.. .....+++..+..++.|++.||+|||
T Consensus 49 ~~~e~~~l~~~~~~~~iv~~~~~-~~~~~---~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh 124 (288)
T cd06616 49 LLMDLDVVMRSSDCPYIVKFYGA-LFREG---DCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLK 124 (288)
T ss_pred HHHHHHHHHHhcCCCCEeeeeeE-EecCC---cEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 346677788886 9999999994 43332 578999997777766441 23355999999999999999999999
Q ss_pred Hc-CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 139 SQ-GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~-gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+. ||+||||||+||+++.++.++|+|||++.......
T Consensus 125 ~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~------------------------------------------ 162 (288)
T cd06616 125 EELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI------------------------------------------ 162 (288)
T ss_pred hcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC------------------------------------------
Confidence 74 99999999999999999999999988773221100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC---CCCccccc
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDI 294 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~s~~sDI 294 (720)
......|++.|+|||++.+. .++.++||
T Consensus 163 -------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di 193 (288)
T cd06616 163 -------------------------------------------------AKTRDAGCRPYMAPERIDPSARDGYDVRSDV 193 (288)
T ss_pred -------------------------------------------------ccccccCccCccCHHHhccccccCCcchhhh
Confidence 00012568889999999776 58999999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCcc---cc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---~~-~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||||++|||++ ||.........+..+.....|.. .. ...+...+|+.+||+++|++|||+.+|+.||||...
T Consensus 194 ~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~ 273 (288)
T cd06616 194 WSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY 273 (288)
T ss_pred hHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence 999999999998 55544322222222222222111 11 122345599999999999999999999999999875
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.9e-30 Score=256.69 Aligned_cols=221 Identities=17% Similarity=0.272 Sum_probs=172.2
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+|...+||.+..|-. .|+..+ .+|+|||| .||.|.-.|.+ .+.+++..++.+-..|+.||.|||+++||.
T Consensus 217 TE~RVL~~~~HPFLt~LKY-sFQt~d---rlCFVMeyanGGeLf~HLsr-er~FsE~RtRFYGaEIvsAL~YLHs~~ivY 291 (516)
T KOG0690|consen 217 TENRVLQNCRHPFLTSLKY-SFQTQD---RLCFVMEYANGGELFFHLSR-ERVFSEDRTRFYGAEIVSALGYLHSRNIVY 291 (516)
T ss_pred hHHHHHHhccCcHHHHhhh-hhccCc---eEEEEEEEccCceEeeehhh-hhcccchhhhhhhHHHHHHhhhhhhCCeee
Confidence 5566788999999988876 455543 68999999 99999988843 456999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||.+|+|++.+|++||.|||+|+.--.. ++
T Consensus 292 RDlKLENLlLDkDGHIKitDFGLCKE~I~~---------------------------------g~--------------- 323 (516)
T KOG0690|consen 292 RDLKLENLLLDKDGHIKITDFGLCKEEIKY---------------------------------GD--------------- 323 (516)
T ss_pred eechhhhheeccCCceEeeecccchhcccc---------------------------------cc---------------
Confidence 999999999999999999999999532111 00
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
+....+|||.|+|||++....|+.++|+|.+||++|||
T Consensus 324 ------------------------------------------t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEM 361 (516)
T KOG0690|consen 324 ------------------------------------------TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEM 361 (516)
T ss_pred ------------------------------------------eeccccCChhhcCchhhccccccceeehhhhhHHHHHH
Confidence 01126899999999999999999999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhh-c-CCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC-ccchHH
Q 004998 305 FC---PFSTGEEKTRTMSSLR-H-RVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP-RDSMEE 373 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~-~-~~~p~~~~~~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~-~~~l~e 373 (720)
+| ||...+.. ..+..|. . -.+|..+ .|+...|+..+|.+||.+|. .+.||.+|+||... +...-.
T Consensus 362 mCGRLPFyn~dh~-kLFeLIl~ed~kFPr~l---s~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~~ 437 (516)
T KOG0690|consen 362 MCGRLPFYNKDHE-KLFELILMEDLKFPRTL---SPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATYR 437 (516)
T ss_pred HhccCcccccchh-HHHHHHHhhhccCCccC---CHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHHH
Confidence 99 88765443 2222222 1 2233332 35556999999999999995 58999999999987 444445
Q ss_pred HHHHHHHhhhhh
Q 004998 374 REAAIELREQID 385 (720)
Q Consensus 374 ~~~~~~~~e~~~ 385 (720)
++..+++.++..
T Consensus 438 Kki~PPfKPqVt 449 (516)
T KOG0690|consen 438 KKIEPPFKPQVT 449 (516)
T ss_pred hccCCCCCCCcc
Confidence 555555555443
|
|
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=2e-28 Score=253.20 Aligned_cols=204 Identities=20% Similarity=0.248 Sum_probs=158.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--------CCCCCHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--------KRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--------~~~l~~~~~~~i~~QIl~aL~ 135 (720)
.+|..++..++||||+++++ ++... ..++++||| .+++|.+++... ...+++..++.++.||+.||.
T Consensus 44 ~~e~~~l~~~~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~ 119 (262)
T cd00192 44 LKEARVMKKLGHPNVVRLLG-VCTEE---EPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGME 119 (262)
T ss_pred HHHHHHHhhcCCCChheeee-eecCC---CceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHH
Confidence 36777899999999999999 55443 368999999 799999999654 356999999999999999999
Q ss_pred HHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||++||+|+||||+||+++.++.++|+|||.+....... .+
T Consensus 120 ~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~----- 161 (262)
T cd00192 120 YLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDD---------------------------------YY----- 161 (262)
T ss_pred HHHcCCcccCccCcceEEECCCCcEEEccccccccccccc---------------------------------cc-----
Confidence 9999999999999999999999999999998874432110 00
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccch
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
.......+++.|+|||.+.+..++.++|||
T Consensus 162 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 191 (262)
T cd00192 162 --------------------------------------------------RKKTGGKLPIRWMAPESLKDGIFTSKSDVW 191 (262)
T ss_pred --------------------------------------------------ccccCCCcCccccCHHHhccCCcchhhccH
Confidence 000013468889999999888899999999
Q ss_pred hhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 296 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 296 SLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
||||++|||++ ||..... ......+......+......+...+++.+||..+|.+|||+.+++++
T Consensus 192 slG~il~~l~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 192 SFGVLLWEIFTLGATPYPGLSN-EEVLEYLRKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred HHHHHHHHHHhcCCCCCCCCCH-HHHHHHHHcCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 99999999997 5554432 23444444333332222334556699999999999999999999864
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.7e-29 Score=266.76 Aligned_cols=218 Identities=17% Similarity=0.198 Sum_probs=161.9
Q ss_pred eeehhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++.+.... .....+|++|||.+++|.+++.... .+++..++.++.||+.||.|||++||
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~gi 124 (330)
T cd07834 46 ILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSANV 124 (330)
T ss_pred HHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchhhhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 336777899999999999999443332 2334689999996679999995544 69999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||.+.........
T Consensus 125 ~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~--------------------------------------------- 159 (330)
T cd07834 125 IHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE--------------------------------------------- 159 (330)
T ss_pred ecCCCCHHHEEEcCCCCEEEcccCceEeecccccc---------------------------------------------
Confidence 99999999999999999999999887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
+.......++++|+|||.+.+. .++.++|||||||++
T Consensus 160 ------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il 197 (330)
T cd07834 160 ------------------------------------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIF 197 (330)
T ss_pred ------------------------------------------cccccccccccCcCCceeeecccCCCcchhHHHHHHHH
Confidence 0000113578999999999888 689999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--CCCCcc----------------------------ccccCchHHHHHHHcCCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRH--RVLPPQ----------------------------LLLKFPKEASFCLWLLHPE 348 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~----------------------------~~~~~p~~~~li~~~L~~d 348 (720)
|+|++ ||....... .+..+.. +..++. .....+...+|+.+||+++
T Consensus 198 ~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 276 (330)
T cd07834 198 AELLTRKPLFPGRDYID-QLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFD 276 (330)
T ss_pred HHHHcCCCCcCCCCHHH-HHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCC
Confidence 99999 554433221 1111111 000000 0112234459999999999
Q ss_pred CCCCCChHHHHcCcccCCCccc
Q 004998 349 PSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|.+||++.++++||||......
T Consensus 277 P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 277 PKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred hhhCCCHHHHHhCccHHhhccc
Confidence 9999999999999999987553
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.5e-28 Score=263.99 Aligned_cols=225 Identities=17% Similarity=0.178 Sum_probs=161.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++.+++||||+++++ ++..+. .++++|||..++|.+++.... .+++..+..++.||+.||.|||+.||+
T Consensus 67 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH~~~i~ 141 (335)
T PTZ00024 67 TLRELKIMNEIKHENIMGLVD-VYVEGD---FINLVMDIMASDLKKVVDRKI-RLTESQVKCILLQILNGLNVLHKWYFM 141 (335)
T ss_pred HHHHHHHHHhCCCcceeeeeE-EEecCC---cEEEEEeccccCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 346788999999999999999 444443 679999996679999995543 489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+...+.......... +... .
T Consensus 142 H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~--------------------------~~~~----~------ 185 (335)
T PTZ00024 142 HRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSK--------------------------DETM----Q------ 185 (335)
T ss_pred cccccHHHeEECCCCCEEECCccceeecccccccccccc--------------------------cccc----c------
Confidence 999999999999999999999998865433211100000 0000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~ 302 (720)
.........+++.|+|||.+.+.. ++.++|||||||++|
T Consensus 186 ----------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~ 225 (335)
T PTZ00024 186 ----------------------------------------RREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFA 225 (335)
T ss_pred ----------------------------------------ccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHH
Confidence 000001135688999999997654 799999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc---CCC--------------------Cccc----cccCchHHHHHHHcCCCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH---RVL--------------------PPQL----LLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~---~~~--------------------p~~~----~~~~p~~~~li~~~L~~dP~~R 352 (720)
||++ ||....... .+..+.. ... ++.+ ........+|+.+||.++|++|
T Consensus 226 el~tg~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 304 (335)
T PTZ00024 226 ELLTGKPLFPGENEID-QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLER 304 (335)
T ss_pred HHHhCCCCCCCCCHHH-HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhc
Confidence 9999 555443322 1111111 000 0000 1112334599999999999999
Q ss_pred CChHHHHcCcccCCCccc
Q 004998 353 PKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 353 pta~eiL~hp~~~~~~~~ 370 (720)
|+++|+|.||||+.....
T Consensus 305 ~s~~~~l~~~~~~~~~~~ 322 (335)
T PTZ00024 305 ISAKEALKHEYFKSDPLP 322 (335)
T ss_pred cCHHHHhcCcccCCCCCC
Confidence 999999999999976443
|
|
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-29 Score=271.54 Aligned_cols=248 Identities=14% Similarity=0.168 Sum_probs=167.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..||+..+.++||+||. .|++.+ .+|+||+| .||++..+|.+.+- |+|..++.|+..+.+|+++.|..|+||
T Consensus 678 AERDILAEADn~WVVrLyy-SFQDkd---nLYFVMdYIPGGDmMSLLIrmgI-FeE~LARFYIAEltcAiesVHkmGFIH 752 (1034)
T KOG0608|consen 678 AERDILAEADNEWVVRLYY-SFQDKD---NLYFVMDYIPGGDMMSLLIRMGI-FEEDLARFYIAELTCAIESVHKMGFIH 752 (1034)
T ss_pred hhhhhHhhcCCcceEEEEE-EeccCC---ceEEEEeccCCccHHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHhcccee
Confidence 5556999999999999999 777776 46999999 99999999966554 999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+.+|++||.|||+|..+.-..- ...++ .+|-- +..+
T Consensus 753 RDiKPDNILIDrdGHIKLTDFGLCTGfRWTHd---------------------skYYq----~gdH~--------RqDS- 798 (1034)
T KOG0608|consen 753 RDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD---------------------SKYYQ----EGDHH--------RQDS- 798 (1034)
T ss_pred cccCccceEEccCCceeeeeccccccceeccc---------------------ccccc----CCCcc--------cccc-
Confidence 99999999999999999999999965421100 00000 00000 0000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcc--cCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK--KQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~--~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
+ .-...+.|.+-+...-+.+ .+..-......+||+.|+|||++....|+..+|+||.|||||
T Consensus 799 -m---------------ep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 799 -M---------------EPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred -C---------------CCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 0 0000111111110000000 112222233479999999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc-CCCCccccccCchHH-HHHHHcCCCCCCCCC---ChHHHHcCcccCCCcc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEA-SFCLWLLHPEPSGRP---KMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rp---ta~eiL~hp~~~~~~~ 369 (720)
||+. ||.........+..+.= ..+.-....+.++++ +||.++. .++++|. .++++..||||+...-
T Consensus 863 em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgIDf 936 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGIDF 936 (1034)
T ss_pred HHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccccch
Confidence 9998 67655443222222110 111111223444444 7877755 5778886 5778999999999844
|
|
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-28 Score=254.88 Aligned_cols=208 Identities=15% Similarity=0.227 Sum_probs=158.3
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
.+|..+|+.++||||+++++ .+..+. .+|++||+ .|++|.+++... ...+++..++.++.||+.||.|||++|
T Consensus 47 ~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~ 122 (267)
T cd06610 47 RKEVQAMSQCNHPNVVKYYT-SFVVGD---ELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG 122 (267)
T ss_pred HHHHHHHHhcCCCCEEEEEE-EEeeCC---EEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 46777899999999999999 444433 67999999 899999999542 245899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||++++++.++|+|||.+.........
T Consensus 123 i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~-------------------------------------------- 158 (267)
T cd06610 123 QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDR-------------------------------------------- 158 (267)
T ss_pred eecCCCCHHhEEEcCCCCEEEcccchHHHhccCccc--------------------------------------------
Confidence 999999999999999999999999887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvl 300 (720)
. . .......|+..|+|||.+... .++.++|+|||||+
T Consensus 159 -----------------------~----------------~---~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i 196 (267)
T cd06610 159 -----------------------T----------------R---KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGIT 196 (267)
T ss_pred -----------------------c----------------c---cccccccCChhhcChHHHccccCcCcccchHhHhHH
Confidence 0 0 000114678999999998777 68999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCcccc------ccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~------~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|+|++ ||............+.. . ++.+. ...+...+|+.+||..||++||++.++++||||
T Consensus 197 ~~~l~~g~~p~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 197 AIELATGAAPYSKYPPMKVLMLTLQN-D-PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred HHHHHhCCCCccccChhhhHHHHhcC-C-CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 999999 56544333222232222 1 11111 122344699999999999999999999999997
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=251.91 Aligned_cols=210 Identities=21% Similarity=0.235 Sum_probs=162.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++++++||||+++++ .+.... ...+++++|| .+++|.+++.+.. .+++..++.++.|++.||.|||+.|+
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~ 122 (260)
T cd06606 46 LEREIRILSSLQHPNIVRYYG-SERDEE-KNTLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGI 122 (260)
T ss_pred HHHHHHHHHHcCCCCEeeEEE-EEecCC-CCeEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346777899999999999999 443331 2368999999 7999999996544 69999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||+|+||+++.++.++|+|||.+........ .
T Consensus 123 ~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---------------------------------~------------ 157 (260)
T cd06606 123 VHRDIKGANILVDSDGVVKLADFGCAKRLGDIET---------------------------------G------------ 157 (260)
T ss_pred cccCCCHHHEEEcCCCCEEEcccccEEecccccc---------------------------------c------------
Confidence 9999999999999999999999988743221100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.......++..|+|||.+.+..++.++||||||+++|
T Consensus 158 -------------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~ 194 (260)
T cd06606 158 -------------------------------------------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVI 194 (260)
T ss_pred -------------------------------------------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHH
Confidence 0000135688999999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|++ ||............+......+..+...+ ...+|+.+||..+|.+||++.++++||||
T Consensus 195 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 195 EMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 9999 66555433333444443223333333333 44599999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=259.65 Aligned_cols=207 Identities=18% Similarity=0.189 Sum_probs=158.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~g 141 (720)
..+|..++..++||||+++++ .+... ..+|+|||| .+++|.+++.+.+ .+++..++.++.||+.||.|||+ .|
T Consensus 50 ~~~E~~~l~~l~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~~ 124 (284)
T cd06620 50 ILRELQIMHECRSPYIVSFYG-AFLNE---NNICMCMEFMDCGSLDRIYKKGG-PIPVEILGKIAVAVVEGLTYLYNVHR 124 (284)
T ss_pred HHHHHHHHHHcCCCCcceEee-eEecC---CEEEEEEecCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 346777899999999999999 44444 368999999 8999999985543 48999999999999999999997 69
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+||+++.++.++|+|||++......
T Consensus 125 i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~----------------------------------------------- 157 (284)
T cd06620 125 IMHRDIKPSNILVNSRGQIKLCDFGVSGELINS----------------------------------------------- 157 (284)
T ss_pred eeccCCCHHHEEECCCCcEEEccCCcccchhhh-----------------------------------------------
Confidence 999999999999999999999988876221000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||++.+..++.++|||||||++
T Consensus 158 ---------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l 192 (284)
T cd06620 158 ---------------------------------------------IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISI 192 (284)
T ss_pred ---------------------------------------------ccCccccCcccCCHHHHccCCCCccchHHHHHHHH
Confidence 00013678999999999888899999999999999
Q ss_pred hhccc---cCCCCchH----------HHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEK----------TRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~----------~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||...... ......+.....+.......+ ...+|+.+||.+||.+|||+.|+++|+||...
T Consensus 193 ~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 193 IELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred HHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence 99998 66543221 111222222212211112233 45599999999999999999999999998765
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-28 Score=255.58 Aligned_cols=206 Identities=14% Similarity=0.083 Sum_probs=154.6
Q ss_pred ehhhhcccCCCCCceecccceeecC--CCCCcEEEEEec-CCCCHHHHHhC-----CCCCCCHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~-~ggsL~~~L~~-----~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.|..++..++||||+++++.++... ......+++||| .+++|.+++.. ....+++..+..++.||+.||.||
T Consensus 49 ~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l 128 (272)
T cd05075 49 SEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYL 128 (272)
T ss_pred HHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHH
Confidence 5677899999999999998443322 122357899999 88999998831 223489999999999999999999
Q ss_pred HHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|++||+||||||+|||++.++.++|+|||++......... .
T Consensus 129 H~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------~--- 169 (272)
T cd05075 129 SSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYY------------------------------------R--- 169 (272)
T ss_pred HHCCeeccccchhheEEcCCCCEEECCCCcccccCcccce------------------------------------e---
Confidence 9999999999999999999999999998887432111000 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
......+++.|+|||.+.+..++.++|||||
T Consensus 170 -------------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Di~sl 200 (272)
T cd05075 170 -------------------------------------------------QGRIAKMPVKWIAIESLADRVYTTKSDVWSF 200 (272)
T ss_pred -------------------------------------------------cCCcccCCcccCCHHHccCCCcChHHHHHHH
Confidence 0000234678999999998889999999999
Q ss_pred hhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 298 GVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 298 Gvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++|||++ ||..... ......+..+..++..........+++.+||+++|.+|||+.++++
T Consensus 201 G~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~ 266 (272)
T cd05075 201 GVTMWEIATRGQTPYPGVEN-SEIYDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRC 266 (272)
T ss_pred HHHHHHHHcCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 999999987 5554333 3444445544333322223334569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=258.31 Aligned_cols=210 Identities=14% Similarity=0.124 Sum_probs=158.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------CCCCHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------RSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------~~l~~~~~~~i~~QIl~aL 134 (720)
..|..++..++||||+++++ ++.... ..|++||| .+++|.+++.+.. ..++...+..++.||+.||
T Consensus 57 ~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 132 (288)
T cd05061 57 LNEASVMKGFTCHHVVRLLG-VVSKGQ---PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 132 (288)
T ss_pred HHHHHHHHhCCCCCeeeEEE-EEcCCC---CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHH
Confidence 35777899999999999999 444443 57999999 8999999995321 2346778899999999999
Q ss_pred HHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
.|||++||+||||||+||+++.++.++|+|||+++..... ++.
T Consensus 133 ~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~----------------------------------~~~--- 175 (288)
T cd05061 133 AYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYET----------------------------------DYY--- 175 (288)
T ss_pred HHHHhCCCcCCCCChheEEEcCCCcEEECcCCcccccccc----------------------------------ccc---
Confidence 9999999999999999999999999999999887432111 000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
.......++..|+|||.+.+..++.++||
T Consensus 176 ---------------------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv 204 (288)
T cd05061 176 ---------------------------------------------------RKGGKGLLPVRWMAPESLKDGVFTTSSDM 204 (288)
T ss_pred ---------------------------------------------------cccCCCcccccccCHHHhccCCCChHhHH
Confidence 00001245677999999988889999999
Q ss_pred hhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc------Cccc
Q 004998 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ------SEFL 364 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~------hp~~ 364 (720)
|||||++|||++ ||...... .....+..+..++......+...+++.+||+++|++|||+.++++ ||||
T Consensus 205 wslG~~l~el~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~ 283 (288)
T cd05061 205 WSFGVVLWEITSLAEQPYQGLSNE-QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSF 283 (288)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCC
Confidence 999999999997 66543332 333444333333322222345569999999999999999999987 8888
Q ss_pred CCC
Q 004998 365 NEP 367 (720)
Q Consensus 365 ~~~ 367 (720)
.+.
T Consensus 284 ~~~ 286 (288)
T cd05061 284 PEV 286 (288)
T ss_pred CCC
Confidence 764
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.1e-28 Score=257.58 Aligned_cols=203 Identities=19% Similarity=0.230 Sum_probs=154.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIF 127 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~i~ 127 (720)
...|..++..++||||+++++ ++.... ..++++|| .+++|.+++... ...+++..++.++
T Consensus 55 ~~~e~~~~~~l~h~~iv~~~~-~~~~~~---~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (283)
T cd05091 55 FKHEAMMRSRLQHPNIVCLLG-VVTKEQ---PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIV 130 (283)
T ss_pred HHHHHHHHhcCCCCCcCeEEE-EEcCCC---ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHH
Confidence 336777889999999999999 554443 47899999 889999998321 1247888999999
Q ss_pred HHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccc
Q 004998 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||.|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 131 ~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--------------------------------- 177 (283)
T cd05091 131 TQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAA--------------------------------- 177 (283)
T ss_pred HHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccc---------------------------------
Confidence 99999999999999999999999999999999999999887432110
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC
Q 004998 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
++ .. ......+++.|+|||.+.+..
T Consensus 178 -~~------------------------------------~~------------------~~~~~~~~~~y~aPE~~~~~~ 202 (283)
T cd05091 178 -DY------------------------------------YK------------------LMGNSLLPIRWMSPEAIMYGK 202 (283)
T ss_pred -hh------------------------------------ee------------------eccCccCCccccCHHHHhcCC
Confidence 00 00 000124578899999998888
Q ss_pred CCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++.++|||||||++|||++ ||...... .....+.....++. ....|. ..+|+..||+.+|.+||++.+|++
T Consensus 203 ~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-~~~~~i~~~~~~~~-~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 203 FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-DVIEMIRNRQVLPC-PDDCPAWVYTLMLECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred CCcchhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCcCCC-CCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 9999999999999999997 55444333 44444444443332 233444 459999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=256.74 Aligned_cols=194 Identities=18% Similarity=0.221 Sum_probs=144.5
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..+++.++||||+++++ ++.... ..++|||| .+++|..++.+....+++..+..++.||+.||.|||++||+|
T Consensus 65 ~~~~~~~~l~h~niv~~~~-~~~~~~---~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH 140 (274)
T cd05076 65 ETASLMSQVSHIHLAFVHG-VCVRGS---ENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVH 140 (274)
T ss_pred HHHHHHhcCCCCCeeeEEE-EEEeCC---ceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccC
Confidence 5667889999999999999 554443 56899999 999999999665556899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCc-------eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 145 HNVRPSCFVMSSFNH-------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 145 rDLKP~NILl~~~~~-------vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|||||+|||++..+. ++++|||.+ ....
T Consensus 141 ~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~---------------------------------------------~~~~ 175 (274)
T cd05076 141 GNVCAKNILLARLGLAEGTSPFIKLSDPGVS---------------------------------------------FTAL 175 (274)
T ss_pred CCCCcccEEEeccCcccCccceeeecCCccc---------------------------------------------cccc
Confidence 999999999976432 455555443 2100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwS 296 (720)
. .....++..|+|||.+.+ ..++.++||||
T Consensus 176 ~-------------------------------------------------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~s 206 (274)
T cd05076 176 S-------------------------------------------------REERVERIPWIAPECVPGGNSLSTAADKWS 206 (274)
T ss_pred c-------------------------------------------------ccccccCCcccCchhhcCCCCCCcHHHHHH
Confidence 0 000246778999999876 44899999999
Q ss_pred hhhhhhhccc----cCCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 297 LGVLLFELFC----PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 297 LGvll~eLlt----pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||++|||++ ||....... ....+.. ...|+ ...+...+|+.+||+.+|++||++.++|++
T Consensus 207 lG~~l~el~~~g~~p~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 207 FGTTLLEICFDGEVPLKERTPSE-KERFYEKKHRLPE---PSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred HHHHHHHHHhCCCCCccccChHH-HHHHHHhccCCCC---CCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 9999999964 565433221 1111221 11222 234566799999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=252.86 Aligned_cols=205 Identities=16% Similarity=0.133 Sum_probs=155.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..++++++||||+++++ .+.. ..++++||| .+++|.+++.+.. ..+++..++.++.||+.||.|||++
T Consensus 42 ~~~~e~~~l~~l~h~~iv~~~~-~~~~----~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~ 116 (257)
T cd05040 42 DFLKEAAIMHSLDHENLIRLYG-VVLT----HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK 116 (257)
T ss_pred HHHHHHHHHhhcCCCCccceeE-EEcC----CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC
Confidence 4447888999999999999999 4433 368999999 8999999995544 4689999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|++|+||||+||+++.++.+||+|||.+...+..... +
T Consensus 117 ~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~---------- 154 (257)
T cd05040 117 RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH--------------------------------Y---------- 154 (257)
T ss_pred CccccccCcccEEEecCCEEEeccccccccccccccc--------------------------------e----------
Confidence 9999999999999999999999999887443211000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.. .....++..|+|||.+.+..++.++|||||||+
T Consensus 155 -------------------------~~--------------------~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~ 189 (257)
T cd05040 155 -------------------------VM--------------------EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVT 189 (257)
T ss_pred -------------------------ec--------------------ccCCCCCceecCHHHhcccCcCchhhhHHHHHH
Confidence 00 001245778999999988889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||...... .....+............. +...+++.+||..+|++||++.++++
T Consensus 190 l~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 190 LWEMFTYGEEPWAGLSGS-QILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred HHHHHhCCCCCCCCCCHH-HHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 999997 55433333 2333333211111122223 34559999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.7e-29 Score=269.10 Aligned_cols=215 Identities=15% Similarity=0.136 Sum_probs=155.0
Q ss_pred ehhhhcccCCCCCceecccceeecCCC----------CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAA----------IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~----------~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
.|..++..++||||+++++.+...... ...+|++|||.+++|.+++... .+++..++.++.||+.||.
T Consensus 51 ~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~ 128 (342)
T cd07854 51 REIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLEQG--PLSEEHARLFMYQLLRGLK 128 (342)
T ss_pred HHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeecccccHHHHHHcC--CCCHHHHHHHHHHHHHHHH
Confidence 577789999999999999844433221 1247999999667999988543 4899999999999999999
Q ss_pred HHHHcCceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 136 AAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
|||+.||+||||||+||+++ .++.++++|||.+......... ..
T Consensus 129 ~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~------------------------------~~----- 173 (342)
T cd07854 129 YIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSH------------------------------KG----- 173 (342)
T ss_pred HHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCcccc------------------------------cc-----
Confidence 99999999999999999998 4557899888877332110000 00
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCcccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASD 293 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sD 293 (720)
......|+..|+|||.+.+ ..++.++|
T Consensus 174 ----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~D 201 (342)
T cd07854 174 ----------------------------------------------------YLSEGLVTKWYRSPRLLLSPNNYTKAID 201 (342)
T ss_pred ----------------------------------------------------ccccccccccccCHHHHhCccccCchhh
Confidence 0001256889999998755 44889999
Q ss_pred chhhhhhhhhccc---cCCCCchHHHHHHHhhcC----------------------CCCc-----ccc-ccCchHHHHHH
Q 004998 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR----------------------VLPP-----QLL-LKFPKEASFCL 342 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~----------------------~~p~-----~~~-~~~p~~~~li~ 342 (720)
||||||++|+|++ ||............+... ..++ .+. .......+|+.
T Consensus 202 iwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 281 (342)
T cd07854 202 MWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLE 281 (342)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHH
Confidence 9999999999999 676544332222221110 0000 011 12233459999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 343 WLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+||.+||.+|||+.++|.||||+....
T Consensus 282 ~~L~~dP~~R~t~~ell~h~~~~~~~~ 308 (342)
T cd07854 282 QILTFNPMDRLTAEEALMHPYMSCYSC 308 (342)
T ss_pred HHhCCCchhccCHHHHhCCCccccccC
Confidence 999999999999999999999986543
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-28 Score=254.40 Aligned_cols=209 Identities=22% Similarity=0.232 Sum_probs=165.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~g 141 (720)
...|...+.+++||||+++++ ++... ...+++||| .+++|.+++... ..+++..++.++.||+.||.|||+ .|
T Consensus 46 ~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~ 120 (264)
T cd06623 46 LLRELKTLRSCESPYVVKCYG-AFYKE---GEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRH 120 (264)
T ss_pred HHHHHHHHHhcCCCCeeeEEE-EEccC---CeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCC
Confidence 346777889999999999999 44443 368999999 889999999554 459999999999999999999999 99
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++|+|||.+........
T Consensus 121 ~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~--------------------------------------------- 155 (264)
T cd06623 121 IIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD--------------------------------------------- 155 (264)
T ss_pred CccCCCCHHHEEECCCCCEEEccCccceecccCCC---------------------------------------------
Confidence 99999999999999999999999887733211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+..++.++||||||+++
T Consensus 156 ---------------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il 190 (264)
T cd06623 156 ---------------------------------------------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTL 190 (264)
T ss_pred ---------------------------------------------cccceeecccccCHhhhCCCCCCchhhHHHHHHHH
Confidence 00013568899999999888899999999999999
Q ss_pred hhccc---cCCCCc--hHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGE--EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~--~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||.... ........+.....++.... ......+++.+||+++|+.||++.++++||||+..
T Consensus 191 ~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 191 LECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred HHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 99999 555443 33344455544444333333 23445599999999999999999999999999764
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-28 Score=253.85 Aligned_cols=203 Identities=13% Similarity=0.146 Sum_probs=156.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.... ..+++||| .+++|.+++......+++..++.++.|++.||.|||++||+
T Consensus 53 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~ 128 (266)
T cd05033 53 LTEASIMGQFDHPNIIRLEG-VVTKSR---PVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYV 128 (266)
T ss_pred HHHHHHHHhCCCCCcceEeE-EEecCC---ceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 35777899999999999999 444432 57999999 89999999966555699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++++|||.+....... ..+
T Consensus 129 H~di~p~nili~~~~~~~l~dfg~~~~~~~~~--------------------------------~~~------------- 163 (266)
T cd05033 129 HRDLAARNILVNSNLVCKVSDFGLSRRLEDSE--------------------------------ATY------------- 163 (266)
T ss_pred cCCCCcceEEEcCCCCEEECccchhhcccccc--------------------------------cce-------------
Confidence 99999999999999999999998874432100 000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||.+.+..++.++|||||||++|+
T Consensus 164 -------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~ 200 (266)
T cd05033 164 -------------------------------------------TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWE 200 (266)
T ss_pred -------------------------------------------eccCCCCCccccChhhhccCCCccccchHHHHHHHHH
Confidence 0000134678999999998889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+.....++......+...+|+.+||+.+|++||++.++++
T Consensus 201 l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~ 260 (266)
T cd05033 201 VMSYGERPYWDMSNQ-DVIKAVEDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVS 260 (266)
T ss_pred HHccCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 987 55443322 334444443332322223344559999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-28 Score=256.60 Aligned_cols=203 Identities=14% Similarity=0.094 Sum_probs=154.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..++..++||||+++++ ++... ..+++||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 56 ~~~e~~~l~~~~~~~i~~~~~-~~~~~----~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 130 (279)
T cd05109 56 ILDEAYVMAGVGSPYVCRLLG-ICLTS----TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRL 130 (279)
T ss_pred HHHHHHHHHhcCCCCCceEEE-EEcCC----CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346777899999999999999 44332 35789999 8999999996655569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||+++........ +
T Consensus 131 iH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~--------------------------------~------------ 166 (279)
T cd05109 131 VHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE--------------------------------Y------------ 166 (279)
T ss_pred eccccccceEEEcCCCcEEECCCCceeecccccce--------------------------------e------------
Confidence 99999999999999999999998887432111000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......+++.|+|||.+.+..++.++|||||||++|
T Consensus 167 --------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~ 202 (279)
T cd05109 167 --------------------------------------------HADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVW 202 (279)
T ss_pred --------------------------------------------ecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHH
Confidence 000013467799999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||..... ......+.....++......+...+++.+||..||+.||++.+++.
T Consensus 203 el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~ 263 (279)
T cd05109 203 ELMTFGAKPYDGIPA-REIPDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVD 263 (279)
T ss_pred HHHcCCCCCCCCCCH-HHHHHHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9987 4443322 2233334443333333333445569999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=256.67 Aligned_cols=202 Identities=14% Similarity=0.172 Sum_probs=150.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------CCCCHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------RSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~------~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.|..+++.++||||+++++ ++.... ..+++||| .|++|.+++.... ..+++..++.++.||+.||.|||
T Consensus 58 ~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH 133 (277)
T cd05036 58 MEALIMSKFNHQNIVRLIG-VSFERL---PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE 133 (277)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEccCC---CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5677899999999999999 443332 46899999 8999999994432 24899999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCC---ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 139 SQGIVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
++|++||||||+||+++.++ .+||+|||.++...... .+.
T Consensus 134 ~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~---------------------------------~~~---- 176 (277)
T cd05036 134 ENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRAS---------------------------------YYR---- 176 (277)
T ss_pred HCCEeecccchheEEEeccCCCcceEeccCccccccCCcc---------------------------------cee----
Confidence 99999999999999998654 58998888774321100 000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccch
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
.......+..|+|||++.+..++.++|||
T Consensus 177 ---------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Diw 205 (277)
T cd05036 177 ---------------------------------------------------KGGRAMLPIKWMPPEAFLDGIFTSKTDVW 205 (277)
T ss_pred ---------------------------------------------------cCCCCCccHhhCCHHHHhcCCcCchhHHH
Confidence 00001335679999999888899999999
Q ss_pred hhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 296 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 296 SLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
||||++|||++ ||...... ..+..+..... ...+... +...+|+.+||..+|++||++.++++|
T Consensus 206 slG~il~el~~~g~~pf~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 206 SFGVLLWEIFSLGYMPYPGRTNQ-EVMEFVTGGGR-LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred HHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCc-CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 99999999996 66654333 22222322211 1222233 344599999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-28 Score=257.12 Aligned_cols=208 Identities=16% Similarity=0.245 Sum_probs=159.0
Q ss_pred eeeehhhhcccCC---CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGD---HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~---HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+.++|..+++.+. ||||+++++ .+..+. .+|++||| .|++|.+++... .+++..++.++.||+.||.|||
T Consensus 45 ~~~~e~~~l~~l~~~~~~~vi~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh 118 (277)
T cd06917 45 DIQREVALLSQLRQSQPPNITKYYG-SYLKGP---RLWIIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIH 118 (277)
T ss_pred HHHHHHHHHHHhccCCCCCeeeEee-eeeeCC---EEEEEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHH
Confidence 3446667777776 999999999 444432 67999999 899999998553 5899999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.||+|+||+|+||+++.++.++++|||.+........
T Consensus 119 ~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~------------------------------------------ 156 (277)
T cd06917 119 KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS------------------------------------------ 156 (277)
T ss_pred hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc------------------------------------------
Confidence 99999999999999999999999999887743211100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSL 297 (720)
......|+..|+|||.+.+. .++.++|+|||
T Consensus 157 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~sl 188 (277)
T cd06917 157 ------------------------------------------------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSL 188 (277)
T ss_pred ------------------------------------------------ccccccCCcceeCHHHhccCCccccchhHHHH
Confidence 00113578899999998754 47899999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccc-cC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
||++|+|++ ||....... ....+... .++.+.. .. +...+|+.+||..||++||++.+++.||||+...
T Consensus 189 G~~l~~ll~g~~p~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 189 GITIYEMATGNPPYSDVDAFR-AMMLIPKS-KPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred HHHHHHHHhCCCCCCCCChhh-hhhccccC-CCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 999999999 565443322 22222222 2333322 13 3455999999999999999999999999997763
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-28 Score=253.26 Aligned_cols=210 Identities=16% Similarity=0.147 Sum_probs=160.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|+.++.+++||||+++++ .+.+.. ...++++||| .+++|.+++...+ .+++..++.++.||+.||.|||++|
T Consensus 50 ~~~~ei~~l~~l~h~~i~~~~~-~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH~~~ 126 (264)
T cd06653 50 ALECEIQLLKNLRHDRIVQYYG-CLRDPE-EKKLSIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLHSNM 126 (264)
T ss_pred HHHHHHHHHHHcCCCCcceEEE-EEEcCC-CCEEEEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4457888999999999999999 443332 2357899999 8999999995543 3899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+||+++.++.++|+|||.+........ .+.
T Consensus 127 i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-------------------------------~~~----------- 164 (264)
T cd06653 127 IVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM-------------------------------SGT----------- 164 (264)
T ss_pred EecCCCCHHHEEEcCCCCEEECccccccccccccc-------------------------------cCc-----------
Confidence 99999999999999999999999988743211000 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......|+..|+|||.+.+..++.++|||||||++
T Consensus 165 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 199 (264)
T cd06653 165 ---------------------------------------------GIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTV 199 (264)
T ss_pred ---------------------------------------------cccccCCcccccCHhhhcCCCCCccccHHHHHHHH
Confidence 00013578899999999888899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+|++ ||............. ....++.++... +...+|+.+||. +|..||++.+++.|||.
T Consensus 200 ~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~ 264 (264)
T cd06653 200 VEMLTEKPPWAEYEAMAAIFKIA-TQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV 264 (264)
T ss_pred HHHHhCCCCCCccCHHHHHHHHH-cCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence 99999 665544443333332 222333344444 445599999999 57999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-28 Score=257.00 Aligned_cols=205 Identities=16% Similarity=0.242 Sum_probs=153.4
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~--~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++++++||||+++++ .+.... .++++|||..++|.+++.... ..+++..++.++.||+.||.|||+.||+
T Consensus 47 ~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~ 122 (284)
T cd07836 47 REISLMKELKHENIVRLHD-VIHTEN---KLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVL 122 (284)
T ss_pred HHHHHHHhhcCCCEeeeee-eEeeCC---cEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5777999999999999999 454443 579999996679999985433 4589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||++++++.++++|||.+....... .
T Consensus 123 h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~--------------------------------~--------------- 155 (284)
T cd07836 123 HRDLKPQNLLINKRGELKLADFGLARAFGIPV--------------------------------N--------------- 155 (284)
T ss_pred eCCCCHHHEEECCCCcEEEeecchhhhhcCCc--------------------------------c---------------
Confidence 99999999999999999999998873321110 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~ 302 (720)
......+++.|+|||.+.+.. ++.++|||||||++|
T Consensus 156 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~ 192 (284)
T cd07836 156 -------------------------------------------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMA 192 (284)
T ss_pred -------------------------------------------ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHH
Confidence 000135688999999987654 789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc-------------------CCCCcc--------ccccCchHHHHHHHcCCCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH-------------------RVLPPQ--------LLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~-------------------~~~p~~--------~~~~~p~~~~li~~~L~~dP~~R 352 (720)
+|++ ||............+.. ...+.. .....+...+++.+||+.||.+|
T Consensus 193 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R 272 (284)
T cd07836 193 EMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELR 272 (284)
T ss_pred HHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccC
Confidence 9999 55443322111111110 000000 01122344599999999999999
Q ss_pred CChHHHHcCccc
Q 004998 353 PKMGELLQSEFL 364 (720)
Q Consensus 353 pta~eiL~hp~~ 364 (720)
|++.++++||||
T Consensus 273 ~~~~~~l~~~~f 284 (284)
T cd07836 273 ISAHDALQHPWF 284 (284)
T ss_pred CCHHHHhcCCCC
Confidence 999999999998
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-28 Score=255.85 Aligned_cols=203 Identities=17% Similarity=0.234 Sum_probs=155.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
...|..++..++||||+++++. +..+. ..+++||| .|++|.+++.. ....+++..++.++.||+.||.|||+
T Consensus 49 ~~~e~~~l~~~~h~~i~~~~~~-~~~~~---~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~ 124 (267)
T cd08229 49 CIKEIDLLKQLNHPNVIKYYAS-FIEDN---ELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS 124 (267)
T ss_pred HHHHHHHHHHccCCchhhhhhe-eEeCC---eEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3367788999999999999994 43332 57999999 88999999842 23458999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+|++|+||||+||+++.++.++++|||.+........
T Consensus 125 ~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~------------------------------------------- 161 (267)
T cd08229 125 RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT------------------------------------------- 161 (267)
T ss_pred CCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCc-------------------------------------------
Confidence 9999999999999999999999998887633211100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......|+..|+|||.+.+..++.++|||||||
T Consensus 162 -----------------------------------------------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~ 194 (267)
T cd08229 162 -----------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGC 194 (267)
T ss_pred -----------------------------------------------ccccccCCcCccCHHHhcCCCccchhhHHHHHH
Confidence 000135788999999998888999999999999
Q ss_pred hhhhccc---cCCCCch-HHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 300 LLFELFC---PFSTGEE-KTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 300 ll~eLlt---pf~~~~~-~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|+|++ ||..... .......+.....++......+ ...+|+.+||+.+|.+|||+.+|++
T Consensus 195 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 195 LLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred HHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 9999999 5543322 2233333443334433333333 4559999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-28 Score=249.08 Aligned_cols=204 Identities=17% Similarity=0.243 Sum_probs=158.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++++++||||+++++ ++.... ..++++|| .|++|.+++......+++..+..++.||+.||.|||+.|+
T Consensus 44 ~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i 119 (253)
T cd05122 44 IINEIQILKKCKHPNIVKYYG-SYLKKD---ELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGI 119 (253)
T ss_pred HHHHHHHHHhCCCCCEeEEEE-EEecCC---eEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCE
Confidence 336777899999999999999 444442 57999999 8899999996654569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||+|+||+++.++.++|+|||.+...+....
T Consensus 120 ~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---------------------------------------------- 153 (253)
T cd05122 120 IHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---------------------------------------------- 153 (253)
T ss_pred ecCCCCHHHEEEccCCeEEEeecccccccccccc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....|+..|+|||.+.+..++.++||||||+++|
T Consensus 154 ---------------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~ 188 (253)
T cd05122 154 ---------------------------------------------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAI 188 (253)
T ss_pred ---------------------------------------------ccceecCCcccCHHHHcCCCCCccccHHHHHHHHH
Confidence 00135788899999998888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCcccccc--CchHHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK--FPKEASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~--~p~~~~li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
+|++ ||.......... .......+...... .....+|+.+||..||++|||+.++|+|||
T Consensus 189 ~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 189 ELAEGKPPYSELPPMKALF-KIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHHhCCCCCCCCchHHHHH-HHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 9999 555443322222 22222222211111 234459999999999999999999999998
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-28 Score=250.16 Aligned_cols=204 Identities=16% Similarity=0.166 Sum_probs=156.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..+++.++||||+++++ ++.... ..+++||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 38 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 113 (250)
T cd05085 38 KFLSEARILKQYDHPNIVKLIG-VCTQRQ---PIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKN 113 (250)
T ss_pred HHHHHHHHHHhCCCCCcCeEEE-EEecCC---ccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446777899999999999999 554443 57999999 899999999655556899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+||+++.++.++++|||++...... .+ .
T Consensus 114 ~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~----------------------------------~~---~------- 149 (250)
T cd05085 114 CIHRDLAARNCLVGENNVLKISDFGMSRQEDDG----------------------------------IY---S------- 149 (250)
T ss_pred eeecccChheEEEcCCCeEEECCCccceecccc----------------------------------cc---c-------
Confidence 999999999999999999999998877321000 00 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||++.+..++.++|||||||++
T Consensus 150 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll 184 (250)
T cd05085 150 ---------------------------------------------SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILL 184 (250)
T ss_pred ---------------------------------------------cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHH
Confidence 00001235679999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+.............+...+|+.+||..+|++||++.++++
T Consensus 185 ~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 185 WETFSLGVCPYPGMTNQ-QAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred HHHhcCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 99997 66554333 333444433322222223345569999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-28 Score=288.13 Aligned_cols=103 Identities=10% Similarity=0.093 Sum_probs=90.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++..++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++..++.|+.||+.||+|||.+|
T Consensus 50 ~~~~E~~~l~~l~hp~Iv~~~~-~~~~~~---~~~lVmEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH~~g 124 (669)
T cd05610 50 QVQAERDALALSKSPFIVHLYY-SLQSAN---NVYLVMEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLHRHG 124 (669)
T ss_pred HHHHHHHHHHhcCCCCcCeEEE-EEEECC---EEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3446777888999999999998 554443 68999999 8999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccC
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
||||||||+||||+.++.++|+|||+++.
T Consensus 125 IiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 125 IIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred EEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 99999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.9e-28 Score=251.92 Aligned_cols=202 Identities=19% Similarity=0.211 Sum_probs=153.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..+++.++|||||++++ ++... .++++||| .+++|.++|.+.. .+++..++.++.||+.||.|||..|++
T Consensus 44 ~~e~~~l~~l~h~~iv~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~i~ 117 (257)
T cd05060 44 LREASVMAQLDHPCIVRLIG-VCKGE----PLMLVMELAPLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKHFV 117 (257)
T ss_pred HHHHHHHHhcCCCCeeeEEE-EEcCC----ceEEEEEeCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCee
Confidence 36777899999999999999 44432 47999999 8899999996544 589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+|||++.++.++|+|||.+...+... .+
T Consensus 118 H~di~p~nili~~~~~~kl~df~~~~~~~~~~---------------------------------~~------------- 151 (257)
T cd05060 118 HRDLAARNVLLVNRHQAKISDFGMSRALGAGS---------------------------------DY------------- 151 (257)
T ss_pred ccCcccceEEEcCCCcEEeccccccceeecCC---------------------------------cc-------------
Confidence 99999999999999999999998874321110 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
+ . ......++..|+|||.+.+..++.++|||||||++||
T Consensus 152 --------~--------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ 190 (257)
T cd05060 152 --------Y--------------R-------------------ATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWE 190 (257)
T ss_pred --------c--------------c-------------------cccCccccccccCHHHhcCCCCCccchHHHHHHHHHH
Confidence 0 0 0000123567999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+......+......+...+++.+||.++|.+||++.++++
T Consensus 191 ~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~ 250 (257)
T cd05060 191 AFSYGAKPYGEMKGA-EVIAMLESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELES 250 (257)
T ss_pred HHcCCCCCcccCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 996 45443332 333444433322222223345569999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-28 Score=255.88 Aligned_cols=205 Identities=18% Similarity=0.248 Sum_probs=154.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++++++||||+++++ ++.++ ...|++|||.+++|.+++.... ..+++..++.++.||+.||.|||++|++|
T Consensus 47 ~E~~~l~~l~~~~iv~~~~-~~~~~---~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H 122 (283)
T cd07835 47 REISLLKELNHPNIVRLLD-VVHSE---NKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLH 122 (283)
T ss_pred HHHHHHHhcCCCCccCHhh-eeccC---CeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeC
Confidence 5777899999999999999 44444 3689999996679999994433 35899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||+|+||+++.++.++|+|||.+...+.... .
T Consensus 123 ~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~--------------------------------~--------------- 155 (283)
T cd07835 123 RDLKPQNLLIDREGALKLADFGLARAFGVPVR--------------------------------T--------------- 155 (283)
T ss_pred CCCCHHHEEEcCCCcEEEeecccccccCCCcc--------------------------------c---------------
Confidence 99999999999999999999988743211100 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~e 303 (720)
.....+++.|+|||++.+. .++.++|||||||++|+
T Consensus 156 -------------------------------------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~ 192 (283)
T cd07835 156 -------------------------------------------YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAE 192 (283)
T ss_pred -------------------------------------------cCccccccCCCCCceeecCcccCcHHHHHHHHHHHHH
Confidence 0012457889999988765 47899999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCC-------------------CC----c---c-ccccCchHHHHHHHcCCCCCCCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRV-------------------LP----P---Q-LLLKFPKEASFCLWLLHPEPSGRP 353 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~-------------------~p----~---~-~~~~~p~~~~li~~~L~~dP~~Rp 353 (720)
|++ ||................. ++ + . .....+...+|+.+||+++|.+||
T Consensus 193 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 272 (283)
T cd07835 193 MVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRI 272 (283)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCc
Confidence 999 5554433222222111100 00 0 0 111123445999999999999999
Q ss_pred ChHHHHcCccc
Q 004998 354 KMGELLQSEFL 364 (720)
Q Consensus 354 ta~eiL~hp~~ 364 (720)
|+.|+++||||
T Consensus 273 t~~~il~~~~~ 283 (283)
T cd07835 273 SAKAALQHPYF 283 (283)
T ss_pred CHHHHhcCCCC
Confidence 99999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-28 Score=252.39 Aligned_cols=200 Identities=16% Similarity=0.176 Sum_probs=153.5
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.+++||||+++++ .+.... ..+++||| .+++|.+++.. ....++...++.++.||+.||.|||+.|++
T Consensus 50 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~ 125 (261)
T cd05072 50 EEANLMKTLQHDKLVRLYA-VVTKEE---PIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 125 (261)
T ss_pred HHHHHHHhCCCCCeeeEEE-EEcCCC---CcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5777899999999999998 444433 57999999 89999999943 344589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+.........
T Consensus 126 H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~---------------------------------------------- 159 (261)
T cd05072 126 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYT---------------------------------------------- 159 (261)
T ss_pred ccccchhhEEecCCCcEEECCCccceecCCCcee----------------------------------------------
Confidence 9999999999999999999988887432110000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||.+.+..++.++|||||||++|+
T Consensus 160 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ 196 (261)
T cd05072 160 -------------------------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYE 196 (261)
T ss_pred -------------------------------------------ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHH
Confidence 0000234678999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+.+....+.. ...| ...+|+.+||+.+|++||+++++++
T Consensus 197 l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 197 IVTYGKIPYPGMSNS-DVMSALQRGYRMPRM-ENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred HHccCCCCCCCCCHH-HHHHHHHcCCCCCCC-CCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 997 55443332 334444443333332 2344 4459999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-28 Score=250.87 Aligned_cols=204 Identities=22% Similarity=0.303 Sum_probs=160.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..|..++..++|||++++++ .+... ..+++++|| .+++|.+++... ...+++..+..++.||+.||.|||++
T Consensus 47 ~~e~~~l~~l~~~~~~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~ 122 (258)
T cd08215 47 LNEVKILKKLNHPNIIKYYE-SFEEK---GKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR 122 (258)
T ss_pred HHHHHHHHhcCCCChhheEE-EEecC---CEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC
Confidence 36677899999999999999 44333 368999999 889999999553 35699999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|++|+||+|+||+++.++.++|+|||.+...+....
T Consensus 123 ~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~-------------------------------------------- 158 (258)
T cd08215 123 KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVD-------------------------------------------- 158 (258)
T ss_pred CEecccCChHHeEEcCCCcEEECCccceeecccCcc--------------------------------------------
Confidence 999999999999999999999999887733211100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......|++.|+|||.+.+..++.++|+||||++
T Consensus 159 ----------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~ 192 (258)
T cd08215 159 ----------------------------------------------LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCV 192 (258)
T ss_pred ----------------------------------------------eecceeeeecccChhHhccCCCCccccHHHHHHH
Confidence 0001357889999999988889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|+|++ ||...... .....+.....++ +....+ ...+++.+||..+|++|||+.++|+||||
T Consensus 193 ~~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 193 LYELCTLKHPFEGENLL-ELALKILKGQYPP-IPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred HHHHHcCCCCCCCCcHH-HHHHHHhcCCCCC-CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 999999 55544332 3333333333333 222333 44599999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-28 Score=253.29 Aligned_cols=224 Identities=17% Similarity=0.179 Sum_probs=160.5
Q ss_pred ehhhhcccCCCC------CceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHL------RNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~Ls~l~Hp------nIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.|..+|.++.+. -+|++.+ +|+-. .+.|||+|..|.|+.++|.. +..+++...++.|.+||+.+|.|||
T Consensus 134 iEi~vLqki~~~DP~g~~rcv~m~~-wFdyr---ghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh 209 (415)
T KOG0671|consen 134 IEIEVLQKINESDPNGKFRCVQMRD-WFDYR---GHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH 209 (415)
T ss_pred HHHHHHHHHHhcCCCCceEEEeeeh-hhhcc---CceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHH
Confidence 455566666432 2466666 45444 37899999999999999944 5667999999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcc-cCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASC-SDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+.+++|-||||+|||+.++...+.-+.+.. ... +. ..-.-+++.|||-|++..
T Consensus 210 ~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~----------------r~----------~ks~~I~vIDFGsAtf~~ 263 (415)
T KOG0671|consen 210 DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFI----------------RP----------LKSTAIKVIDFGSATFDH 263 (415)
T ss_pred hcceeecCCChheEEEeccceEEEeccCCcccee----------------cc----------CCCcceEEEecCCcceec
Confidence 999999999999999988777666433221 000 00 000124567777665432
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
.. ....+.|..|+|||++.+-+++.++||||+
T Consensus 264 e~------------------------------------------------hs~iVsTRHYRAPEViLgLGwS~pCDvWSi 295 (415)
T KOG0671|consen 264 EH------------------------------------------------HSTIVSTRHYRAPEVILGLGWSQPCDVWSI 295 (415)
T ss_pred cC------------------------------------------------cceeeeccccCCchheeccCcCCccCceee
Confidence 21 012577999999999999999999999999
Q ss_pred hhhhhhccccC---CCCc--hHHHHHHHhhcCCCCccccccC--------------------------------------
Q 004998 298 GVLLFELFCPF---STGE--EKTRTMSSLRHRVLPPQLLLKF-------------------------------------- 334 (720)
Q Consensus 298 Gvll~eLltpf---~~~~--~~~~~~~~l~~~~~p~~~~~~~-------------------------------------- 334 (720)
||||+||.+|+ ...+ ++.++|..+.. .+|.......
T Consensus 296 GCIL~ElytG~~LFqtHen~EHLaMMerIlG-p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~ 374 (415)
T KOG0671|consen 296 GCILVELYTGETLFQTHENLEHLAMMERILG-PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQ 374 (415)
T ss_pred eeEEEEeeccceecccCCcHHHHHHHHHhhC-CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhcc
Confidence 99999999954 3333 44456655554 3332211110
Q ss_pred -----chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 335 -----PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 335 -----p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
....||+.+||.+||.+|+|+.|+|.||||+...
T Consensus 375 ~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 375 DDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT 413 (415)
T ss_pred CcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence 0123899999999999999999999999998763
|
|
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-28 Score=252.09 Aligned_cols=196 Identities=16% Similarity=0.184 Sum_probs=148.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|+.++||||+++++ ++... ..+++||| .+++|.+++......++...++.++.||+.||.|||++|
T Consensus 47 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 121 (259)
T cd05037 47 AFFETASLMSQLSHKHLVKLYG-VCVRD----ENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKK 121 (259)
T ss_pred HHHHHHHHHHcCCCcchhheee-EEecC----CcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 3446777899999999999999 44332 45899999 899999999665546899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC-------ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 142 IVVHNVRPSCFVMSSFN-------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~-------~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
|+||||||+||+++.++ .++++|||.+......
T Consensus 122 i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~---------------------------------------- 161 (259)
T cd05037 122 LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSR---------------------------------------- 161 (259)
T ss_pred eecccCccceEEEecCccccCCceeEEeCCCCcccccccc----------------------------------------
Confidence 99999999999999877 6888777766321100
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC--CCCccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCAS 292 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~s 292 (720)
....++..|+|||++.+. .++.++
T Consensus 162 ------------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~~ 187 (259)
T cd05037 162 ------------------------------------------------------EERVERIPWIAPECIRNGQASLTIAA 187 (259)
T ss_pred ------------------------------------------------------cccccCCCccChhhhcCCCCCcchhh
Confidence 002456779999999877 689999
Q ss_pred cchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 293 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 293 DIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||||++|||++ ||...... ............+ ........+|+.+||..+|.+|||+.++++
T Consensus 188 Di~slG~~~~~l~~~~~~p~~~~~~~-~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 188 DKWSFGTTLLEICSNGEEPLSTLSSS-EKERFYQDQHRLP--MPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred HHHHHHHHHHHHHhCCCCCcccCCch-hHHHHHhcCCCCC--CCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 99999999999987 34333211 1111111111111 112256679999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-28 Score=255.57 Aligned_cols=203 Identities=17% Similarity=0.134 Sum_probs=149.0
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+|.+++||||+++++ ++.... ...++++||| .+++|.+++... .+++..++.++.||+.||.|||++||+|
T Consensus 55 ~E~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~~i~H 130 (283)
T cd05080 55 KEINILKTLYHENIVKYKG-CCSEQG-GKGLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQHYIH 130 (283)
T ss_pred HHHHHHHhCCCCCEeeEEE-EEecCC-CceEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 5777999999999999999 443322 2357999999 999999999543 3999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||+++.++.++|+|||.+........ .+
T Consensus 131 ~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--------------------------------~~-------------- 164 (283)
T cd05080 131 RDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE--------------------------------YY-------------- 164 (283)
T ss_pred cccChheEEEcCCCcEEEeecccccccCCcch--------------------------------hh--------------
Confidence 99999999999999999999988743211100 00
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.. .....++..|+|||.+.+..++.++|||||||++|||
T Consensus 165 ---------------------~~--------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el 203 (283)
T cd05080 165 ---------------------RV--------------------REDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYEL 203 (283)
T ss_pred ---------------------cc--------------------CCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHH
Confidence 00 0001346679999999888899999999999999999
Q ss_pred cc---cCCCCchHHH--------------HHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 305 FC---PFSTGEEKTR--------------TMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 305 lt---pf~~~~~~~~--------------~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++ ||........ ....+.....++ ..... +...+|+..||.++|++|||+.++++
T Consensus 204 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 204 LTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLP-CPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred HhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCC-CCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 99 4432211100 000011111111 12223 34459999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.3e-28 Score=258.55 Aligned_cols=204 Identities=15% Similarity=0.176 Sum_probs=154.8
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..|..+++++ +||||+++++ .+.... ..|++||| .+++|.+++.. ....+++.+++.++.||+.||.|||++|
T Consensus 86 ~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ 161 (302)
T cd05055 86 MSELKIMSHLGNHENIVNLLG-ACTIGG---PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKN 161 (302)
T ss_pred HHHHHHHHhccCCCCcceEEE-EEecCC---ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3577789999 8999999999 554443 57999999 88999999954 3334899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||||+|||++.++.++++|||.+....... .+
T Consensus 162 ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------~~----------- 197 (302)
T cd05055 162 CIHRDLAARNVLLTHGKIVKICDFGLARDIMNDS---------------------------------NY----------- 197 (302)
T ss_pred eehhhhccceEEEcCCCeEEECCCcccccccCCC---------------------------------ce-----------
Confidence 9999999999999999999999998874321110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......++..|+|||.+.+..++.++|||||||++
T Consensus 198 ---~-----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil 233 (302)
T cd05055 198 ---V-----------------------------------------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILL 233 (302)
T ss_pred ---e-----------------------------------------ecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHH
Confidence 0 00002357789999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||............+..+..++......+...+|+.+||.++|++|||+.|+++
T Consensus 234 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 234 WEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred HHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 99986 555444333333333333222222222345569999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-28 Score=255.54 Aligned_cols=207 Identities=15% Similarity=0.193 Sum_probs=152.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++++++||||+++++ ++..+. ..+++||| .++.|..++.+ ...+++.+++.++.||+.||.|||++||
T Consensus 47 ~~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~iv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i 121 (288)
T cd07833 47 ALREVKVLRQLRHENIVNLKE-AFRRKG---RLYLVFEYVERTLLELLEAS-PGGLPPDAVRSYIWQLLQAIAYCHSHNI 121 (288)
T ss_pred HHHHHHHHHhcCCCCeeehhh-eEEECC---EEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346778999999999999999 444432 57999999 55444444433 3459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||+|+||+++.++.++|+|||.+........
T Consensus 122 ~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~---------------------------------------------- 155 (288)
T cd07833 122 IHRDIKPENILVSESGVLKLCDFGFARALRARPA---------------------------------------------- 155 (288)
T ss_pred ecCCCCHHHeEECCCCCEEEEeeecccccCCCcc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
.......++.+|+|||++.+. .++.++|||||||++
T Consensus 156 -------------------------------------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l 192 (288)
T cd07833 156 -------------------------------------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIM 192 (288)
T ss_pred -------------------------------------------ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHH
Confidence 000113578899999999888 689999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhh--cC------------------CCCc---------ccccc-CchHHHHHHHcCCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLR--HR------------------VLPP---------QLLLK-FPKEASFCLWLLHPE 348 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~--~~------------------~~p~---------~~~~~-~p~~~~li~~~L~~d 348 (720)
|+|++ ||.............. .. .+++ .+... .+...+|+.+||.++
T Consensus 193 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 272 (288)
T cd07833 193 AELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMD 272 (288)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccC
Confidence 99999 4544333222111100 00 0000 01111 234559999999999
Q ss_pred CCCCCChHHHHcCccc
Q 004998 349 PSGRPKMGELLQSEFL 364 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~ 364 (720)
|++||++.++++||||
T Consensus 273 p~~Rps~~~il~~~~f 288 (288)
T cd07833 273 PKERLTCDELLQHPYF 288 (288)
T ss_pred chhcccHHHHhcCCCC
Confidence 9999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-28 Score=256.44 Aligned_cols=208 Identities=17% Similarity=0.236 Sum_probs=161.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++..++||||+++++ .+... ...|+++|| .|++|.+++......+++..+..++.||+.||.|||+.||+
T Consensus 63 ~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~ 138 (286)
T cd06614 63 INEILIMKDCKHPNIVDYYD-SYLVG---DELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVI 138 (286)
T ss_pred HHHHHHHHHCCCCCeeEEEE-EEEEC---CEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 35777899999999999999 44444 267999999 88999999966544699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||+|+||+++.++.++|+|||.+....... .
T Consensus 139 H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~---------------------------------~-------------- 171 (286)
T cd06614 139 HRDIKSDNILLSKDGSVKLADFGFAAQLTKEK---------------------------------S-------------- 171 (286)
T ss_pred eCCCChhhEEEcCCCCEEECccchhhhhccch---------------------------------h--------------
Confidence 99999999999999999999988763211000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......+++.|+|||.+.+..++.++|||||||++|+
T Consensus 172 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~ 208 (286)
T cd06614 172 -------------------------------------------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIE 208 (286)
T ss_pred -------------------------------------------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHH
Confidence 0001356889999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccc-cccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQL-LLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~-~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++ ||....... .+..+.....++.. ...++ ...+|+.+||+.+|.+||++.+++.|+||...
T Consensus 209 l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 276 (286)
T cd06614 209 MAEGEPPYLREPPLR-ALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA 276 (286)
T ss_pred HHhCCCCCCCCCHHH-HHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence 999 555443332 22223222222221 12133 34599999999999999999999999999984
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-28 Score=251.73 Aligned_cols=201 Identities=15% Similarity=0.145 Sum_probs=154.3
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++.+++||||+++++ ++.... .+|++||| .+++|.+++... +..+++..+..++.||+.||.|||+.||+
T Consensus 50 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 125 (261)
T cd05068 50 AEAQIMKKLRHPKLIQLYA-VCTLEE---PIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYI 125 (261)
T ss_pred HHHHHHHHCCCCCccceeE-EEecCC---CeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 5777999999999999999 554443 57999999 799999999543 34689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+...+..... ..
T Consensus 126 H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~------------------------------~~-------------- 161 (261)
T cd05068 126 HRDLAARNVLVGENNICKVADFGLARVIKEDIYE------------------------------AR-------------- 161 (261)
T ss_pred eccCCcceEEEcCCCCEEECCcceEEEccCCccc------------------------------cc--------------
Confidence 9999999999999999999999887443211000 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.| ...+..|+|||.+.+..++.++|||||||++||
T Consensus 162 --------------------------~~-------------------~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e 196 (261)
T cd05068 162 --------------------------EG-------------------AKFPIKWTAPEAALYNRFSIKSDVWSFGILLTE 196 (261)
T ss_pred --------------------------CC-------------------CcCceeccCccccccCCCCchhhHHHHHHHHHH
Confidence 00 122457999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+......+..........+++.+||+.+|.+||++.++++
T Consensus 197 l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 197 IVTYGRMPYPGMTNA-EVLQQVDQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HHhcCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 998 56554433 333444333222222223345569999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-28 Score=253.12 Aligned_cols=205 Identities=15% Similarity=0.162 Sum_probs=155.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..+|.+++||||+++++ ++..+. .+|++||| .+++|.+++......+++.+++.++.||+.||.|||++|+
T Consensus 52 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i 127 (267)
T cd05066 52 FLSEASIMGQFDHPNIIHLEG-VVTKSK---PVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGY 127 (267)
T ss_pred HHHHHHHHHhCCCCCcceEEE-EEecCC---ccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 346777899999999999999 454433 57999999 8899999996655568999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++++|||.+.........
T Consensus 128 ~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------- 162 (267)
T cd05066 128 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA--------------------------------------------- 162 (267)
T ss_pred eehhhchhcEEECCCCeEEeCCCCcccccccccce---------------------------------------------
Confidence 99999999999999999999999887433111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.. ......++..|+|||.+.+..++.++|||||||++|
T Consensus 163 -----------------------~~-------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ 200 (267)
T cd05066 163 -----------------------AY-------------------TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMW 200 (267)
T ss_pred -----------------------ee-------------------ecCCCccceeecCHhHhccCccCchhhhHHHHHHHH
Confidence 00 000013356899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+.+...++......+...+|+.+||+++|.+||++.++++
T Consensus 201 ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 201 EVMSYGERPYWEMSNQ-DVIKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred HHhcCCCCCcccCCHH-HHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 9885 55443332 233334443323332223345569999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-28 Score=263.81 Aligned_cols=216 Identities=18% Similarity=0.205 Sum_probs=157.5
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+++++ +||||+++++ ++... ....+|+||||.+++|.+++... .+++..++.++.||+.||.|||+.||+
T Consensus 54 ~~E~~~l~~l~~h~ni~~~~~-~~~~~-~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~i~ 129 (337)
T cd07852 54 FREIMFLQELGDHPNIVKLLN-VIKAE-NDKDIYLVFEYMETDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGNVI 129 (337)
T ss_pred hHHHHHHHHhcCCCCccceee-eeccC-CCceEEEEecccccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3678899999 9999999999 44332 22357999999667999999554 589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+......... .
T Consensus 130 H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~--------------------------------~------------- 164 (337)
T cd07852 130 HRDLKPSNILLNSDCRVKLADFGLARSLSELEEN--------------------------------P------------- 164 (337)
T ss_pred cCCCCHHHEEEcCCCcEEEeeccchhcccccccc--------------------------------c-------------
Confidence 9999999999999999999999887432111000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
..+ ......||++|+|||++.+. .++.++|||||||++|
T Consensus 165 ---------------------------------------~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~ 204 (337)
T cd07852 165 ---------------------------------------ENP-VLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILG 204 (337)
T ss_pred ---------------------------------------cCc-chhcccccccccCceeeeccccccccchHHHHHHHHH
Confidence 000 00114689999999988654 4789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhh--------------------------cCC--CCcccccc-CchHHHHHHHcCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLR--------------------------HRV--LPPQLLLK-FPKEASFCLWLLHPEPS 350 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~--------------------------~~~--~p~~~~~~-~p~~~~li~~~L~~dP~ 350 (720)
+|++ ||.............. ... ........ .+...+||.+||+.+|+
T Consensus 205 el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~ 284 (337)
T cd07852 205 EMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPN 284 (337)
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcc
Confidence 9999 5544322211111000 000 00111112 23445999999999999
Q ss_pred CCCChHHHHcCcccCCCcc
Q 004998 351 GRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||+.++++||||.....
T Consensus 285 ~Rps~~~il~~~~~~~~~~ 303 (337)
T cd07852 285 KRLTAEEALEHPYVAQFHN 303 (337)
T ss_pred cccCHHHHhhChhhhhhcc
Confidence 9999999999999988644
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-28 Score=257.03 Aligned_cols=202 Identities=16% Similarity=0.163 Sum_probs=151.5
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC----------CCCCHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----------RSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~----------~~l~~~~~~~i~~QIl~aL 134 (720)
+|..++.+++||||+++++ ++..+. .++++||| .+++|.++|.... ..+++..++.++.||+.||
T Consensus 68 ~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al 143 (296)
T cd05051 68 KEVKILSRLSDPNIARLLG-VCTVDP---PLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGM 143 (296)
T ss_pred HHHHHHHhcCCCCEeEEEE-EEecCC---CcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHH
Confidence 6778999999999999999 554442 67999999 8999999995433 2589999999999999999
Q ss_pred HHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
.|||+.||+||||||+||+++.++.++|+|||.+....... .+.
T Consensus 144 ~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~~--- 187 (296)
T cd05051 144 RYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSD---------------------------------YYR--- 187 (296)
T ss_pred HHHHHcCccccccchhceeecCCCceEEccccceeecccCc---------------------------------cee---
Confidence 99999999999999999999999999999998774321110 000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
......+++.|+|||.+.+..++.++||
T Consensus 188 ----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 215 (296)
T cd05051 188 ----------------------------------------------------VQGRAPLPIRWMAWESVLLGKFTTKSDV 215 (296)
T ss_pred ----------------------------------------------------ecCcCCCCceecCHHHhhcCCCCccchh
Confidence 0001345788999999988889999999
Q ss_pred hhhhhhhhhccc-----cCCCCchHHHHHHHhhcC-------CCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 295 YRLGVLLFELFC-----PFSTGEEKTRTMSSLRHR-------VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 295 wSLGvll~eLlt-----pf~~~~~~~~~~~~l~~~-------~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||++|||++ ||...... ..+..+... ...+......+...+|+.+||+.||.+|||+.||++
T Consensus 216 ~slG~~l~el~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~ 292 (296)
T cd05051 216 WAFGVTLWEILTLCREQPYEHLTDQ-QVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL 292 (296)
T ss_pred hhhHHHHHHHHhcCCCCCCCCcChH-HHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence 999999999987 44433222 222222211 111111112234569999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-28 Score=269.43 Aligned_cols=203 Identities=17% Similarity=0.188 Sum_probs=154.3
Q ss_pred eehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC----------------------------
Q 004998 65 HSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------------------- 114 (720)
Q Consensus 65 ~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------------------- 114 (720)
.+|..+|+++. |||||++++ ++.... .+|+|||| .+++|.++|.+.
T Consensus 88 ~~Ei~~l~~l~~HpnIv~l~~-~~~~~~---~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (400)
T cd05105 88 MSELKIMTHLGPHLNIVNLLG-ACTKSG---PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADEST 163 (400)
T ss_pred HHHHHHHHhcCCCCCeeeEEE-EEccCC---ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccc
Confidence 36778999996 999999999 554443 57999999 999999998431
Q ss_pred -------------------------------------------------------------------CCCCCHHHHHHHH
Q 004998 115 -------------------------------------------------------------------KRSVDVYECLHIF 127 (720)
Q Consensus 115 -------------------------------------------------------------------~~~l~~~~~~~i~ 127 (720)
...+++.++..++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~ 243 (400)
T cd05105 164 RSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFT 243 (400)
T ss_pred cchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHH
Confidence 1237788899999
Q ss_pred HHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccc
Q 004998 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||.|||+.||+||||||+|||++.++.+||+|||++........
T Consensus 244 ~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~------------------------------- 292 (400)
T cd05105 244 YQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSN------------------------------- 292 (400)
T ss_pred HHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceecccccc-------------------------------
Confidence 9999999999999999999999999999999999999988743211100
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC
Q 004998 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
. .......+++.|+|||.+.+..
T Consensus 293 --~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~ 315 (400)
T cd05105 293 --Y-------------------------------------------------------VSKGSTFLPVKWMAPESIFDNL 315 (400)
T ss_pred --c-------------------------------------------------------cccCCcCCCcceEChhhhcCCC
Confidence 0 0000124678899999998888
Q ss_pred CCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++.++|||||||++|||++ ||............+.....++ ....+| ...+|+.+||..||++||++.++.+
T Consensus 316 ~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 316 YTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMA-KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred CCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCC-CCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 9999999999999999985 5554433333344444443332 223344 4469999999999999999998875
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-28 Score=255.23 Aligned_cols=202 Identities=17% Similarity=0.162 Sum_probs=153.4
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--------------CCCCHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------RSVDVYECLHIFRQI 130 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------------~~l~~~~~~~i~~QI 130 (720)
+|..+++.++||||+++++ ++.... ..+++||| .+++|.+++.... ..+++..++.++.||
T Consensus 56 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi 131 (280)
T cd05092 56 REAELLTVLQHQHIVRFYG-VCTEGR---PLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQI 131 (280)
T ss_pred HHHHHHhcCCCCCCceEEE-EEecCC---ceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHH
Confidence 5677899999999999999 554443 57999999 8999999995432 247899999999999
Q ss_pred HHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccc
Q 004998 131 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 131 l~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
+.||.|||++||+||||||+|||++.++.++|+|||++...... ++
T Consensus 132 ~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~----------------------------------~~ 177 (280)
T cd05092 132 ASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYST----------------------------------DY 177 (280)
T ss_pred HHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCC----------------------------------ce
Confidence 99999999999999999999999999999999998877322110 00
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCc
Q 004998 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 290 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~ 290 (720)
.. ......+++.|+|||.+.+..++.
T Consensus 178 ----------------------------------~~--------------------~~~~~~~~~~y~aPE~~~~~~~~~ 203 (280)
T cd05092 178 ----------------------------------YR--------------------VGGRTMLPIRWMPPESILYRKFTT 203 (280)
T ss_pred ----------------------------------ee--------------------cCCCccccccccCHHHhccCCcCc
Confidence 00 000123567899999999888999
Q ss_pred cccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 291 ASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|||||||++|||++ ||...... .....+..+..+.......+...+|+.+||+.||.+||++.+|++
T Consensus 204 ~~Di~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 204 ESDIWSFGVVLWEIFTYGKQPWYQLSNT-EAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred hhhHHHHHHHHHHHHcCCCCCCccCCHH-HHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 9999999999999997 44433333 233333333332222233355669999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-28 Score=258.07 Aligned_cols=204 Identities=20% Similarity=0.270 Sum_probs=151.4
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..++..++||||+++++ ++..+. .+|++||| .+++|.+++... ..+++..++.++.||+.||.|||+.||+|
T Consensus 49 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~h 123 (286)
T cd07846 49 REIRMLKQLRHENLVNLIE-VFRRKK---RLYLVFEFVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHSHNIIH 123 (286)
T ss_pred HHHHHHHhcCCcchhhHHH-hcccCC---eEEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 5777899999999999999 444433 67999999 777888776443 34899999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
+||+|+||++++++.++|+|||++....... .
T Consensus 124 ~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~--------------------------------~---------------- 155 (286)
T cd07846 124 RDIKPENILVSQSGVVKLCDFGFARTLAAPG--------------------------------E---------------- 155 (286)
T ss_pred cCCCHHHEEECCCCcEEEEeeeeeeeccCCc--------------------------------c----------------
Confidence 9999999999999999999988773221100 0
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~e 303 (720)
......++.+|+|||.+.+.. ++.++|||||||++||
T Consensus 156 ------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~e 193 (286)
T cd07846 156 ------------------------------------------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTE 193 (286)
T ss_pred ------------------------------------------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHH
Confidence 000135788999999987644 7889999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhh--c------------------CCCCc---------cccccCchHHHHHHHcCCCCCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLR--H------------------RVLPP---------QLLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~--~------------------~~~p~---------~~~~~~p~~~~li~~~L~~dP~~ 351 (720)
|++ ||.............. . ...+. ......+...+|+.+||+++|.+
T Consensus 194 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 273 (286)
T cd07846 194 MLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDD 273 (286)
T ss_pred HHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCccc
Confidence 999 4443322111111000 0 00000 00111234459999999999999
Q ss_pred CCChHHHHcCccc
Q 004998 352 RPKMGELLQSEFL 364 (720)
Q Consensus 352 Rpta~eiL~hp~~ 364 (720)
||++.++++||||
T Consensus 274 Rp~~~~il~~~~~ 286 (286)
T cd07846 274 RPSSSQLLHHEFF 286 (286)
T ss_pred chhHHHHhcCCCC
Confidence 9999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.9e-28 Score=251.86 Aligned_cols=204 Identities=20% Similarity=0.256 Sum_probs=158.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++.+++|+||+++++ .+.... .++++||| .+++|.+++.. ....+++..++.++.||+.||.|||
T Consensus 48 ~~~~ei~~l~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh 123 (267)
T cd08224 48 DCLKEIDLLKQLDHPNVIKYLA-SFIENN---ELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH 123 (267)
T ss_pred HHHHHHHHHHhCCCCCeeeeee-eeecCC---eEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 3446778999999999999999 444432 57999999 88999999842 3445899999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.||+||||||+||+++.++.++++|||.+........
T Consensus 124 ~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~------------------------------------------ 161 (267)
T cd08224 124 SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT------------------------------------------ 161 (267)
T ss_pred hCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCc------------------------------------------
Confidence 99999999999999999999999999887632211000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......|++.|+|||.+.+..++.++||||||
T Consensus 162 ------------------------------------------------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG 193 (267)
T cd08224 162 ------------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLG 193 (267)
T ss_pred ------------------------------------------------ccceecCCccccCHHHhccCCCCchhcHHHHH
Confidence 00013568899999999888899999999999
Q ss_pred hhhhhccc---cCCCCc-hHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 299 VLLFELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~-~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|+|++ ||.... ........+..+..++......+ ...+++.+||.++|++|||+.+|++
T Consensus 194 ~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 194 CLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred HHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 99999999 554332 22334445555555554432333 4559999999999999999999885
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=6e-28 Score=253.04 Aligned_cols=202 Identities=13% Similarity=0.110 Sum_probs=153.7
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------CCCCCHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------KRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------~~~l~~~~~~~i~~QIl~aL~ 135 (720)
+|..+|..++||||+++++ ++... ...|++||| .+++|.+++... ...+++..++.++.||+.||.
T Consensus 58 ~e~~~l~~~~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 133 (277)
T cd05032 58 NEASVMKEFNCHHVVRLLG-VVSTG---QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMA 133 (277)
T ss_pred HHHHHHHhCCCCceeEEEE-EEcCC---CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHH
Confidence 6777899999999999999 44444 357999999 889999999432 123688899999999999999
Q ss_pred HHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||+.||+||||||+||+++.++.++|+|||.++..... ++ .
T Consensus 134 ~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~----------------------------------~~--~-- 175 (277)
T cd05032 134 YLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYET----------------------------------DY--Y-- 175 (277)
T ss_pred HHHhCCccccccChheEEEcCCCCEEECCcccchhhccC----------------------------------cc--c--
Confidence 999999999999999999999999999998877432111 00 0
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccch
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
.......++..|+|||.+.+..++.++|||
T Consensus 176 --------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~ 205 (277)
T cd05032 176 --------------------------------------------------RKGGKGLLPVRWMAPESLKDGVFTTKSDVW 205 (277)
T ss_pred --------------------------------------------------ccCCCCCccccccCHHHHhcCCCCcccchH
Confidence 000012457789999999888899999999
Q ss_pred hhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 296 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 296 SLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++|||++ ||..... ......+.....++......+...+|+.+||.++|++|||+.++++
T Consensus 206 slG~il~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 206 SFGVVLWEMATLAEQPYQGLSN-EEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred HHHHHHHHhhccCCCCCccCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99999999997 5654333 2344444433332222222344459999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.9e-28 Score=255.88 Aligned_cols=208 Identities=20% Similarity=0.289 Sum_probs=157.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+...|..+|++++||||+++++ ++.++ ..++++|||.+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 44 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i 119 (283)
T cd05118 44 TALREIKLLKELNHPNIIKLLD-VFRHK---GDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGI 119 (283)
T ss_pred HHHHHHHHHHHhcCCCcchHHH-hhccC---CCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 3446778899999999999999 44444 3689999996679999996655669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+...+....
T Consensus 120 ~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~---------------------------------------------- 153 (283)
T cd05118 120 LHRDLKPENLLINTEGVLKLADFGLARSFGSPVR---------------------------------------------- 153 (283)
T ss_pred eecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc----------------------------------------------
Confidence 9999999999999999999999987733221100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
......++.+|+|||.+.+. .++.++|||||||++
T Consensus 154 --------------------------------------------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l 189 (283)
T cd05118 154 --------------------------------------------PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIF 189 (283)
T ss_pred --------------------------------------------cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHH
Confidence 00013568899999999877 589999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCC--C-------------------------ccccc-cCchHHHHHHHcCCCCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVL--P-------------------------PQLLL-KFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~--p-------------------------~~~~~-~~p~~~~li~~~L~~dP~ 350 (720)
|+|++ ||...+.............. + +.... ...+..+||.+||++||.
T Consensus 190 ~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~ 269 (283)
T cd05118 190 AELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPH 269 (283)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcc
Confidence 99999 55443332211111110000 0 00111 123445999999999999
Q ss_pred CCCChHHHHcCccc
Q 004998 351 GRPKMGELLQSEFL 364 (720)
Q Consensus 351 ~Rpta~eiL~hp~~ 364 (720)
+||++.+++.||||
T Consensus 270 ~Rp~~~~ll~~~~~ 283 (283)
T cd05118 270 KRITAEQALAHPYF 283 (283)
T ss_pred cCcCHHHHhhCCCC
Confidence 99999999999997
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.5e-28 Score=251.25 Aligned_cols=201 Identities=13% Similarity=0.129 Sum_probs=153.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++.+++||||+++++ ++... ..|++||| .+++|.+++.. ....+++..++.++.||+.||.|||++||
T Consensus 49 ~~E~~~l~~l~~~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i 123 (260)
T cd05070 49 LEEAQIMKKLRHDKLVQLYA-VVSEE----PIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY 123 (260)
T ss_pred HHHHHHHHhcCCCceEEEEe-EECCC----CcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 36777999999999999998 44332 36899999 88999999954 33458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.........
T Consensus 124 ~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------- 158 (260)
T cd05070 124 IHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT--------------------------------------------- 158 (260)
T ss_pred ccCCCccceEEEeCCceEEeCCceeeeeccCcccc---------------------------------------------
Confidence 99999999999999999999988887332111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+..++.++|||||||++|
T Consensus 159 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 194 (260)
T cd05070 159 --------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 194 (260)
T ss_pred --------------------------------------------cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHH
Confidence 000023466799999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+.....++..........+|+.+||.++|++|||+++++.
T Consensus 195 ~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 195 ELVTKGRVPYPGMNNR-EVLEQVERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred HHHhcCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 9997 45443332 344444443333322223344559999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.4e-28 Score=251.78 Aligned_cols=205 Identities=20% Similarity=0.268 Sum_probs=157.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++.+++||||+++++ .+.+.. ..+++||| .+++|.+++. .....+++.+++.++.||+.||.|||
T Consensus 48 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH 123 (260)
T cd08222 48 QANQEAQLLSKLDHPAIVKFHA-SFLERD---AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH 123 (260)
T ss_pred HHHHHHHHHHhCCCCcHHHHHH-HHhcCC---ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH
Confidence 3446777899999999999999 443333 57999999 8899999884 23456899999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.|++|+||||+||+++. +.++++|||.+...... .+.
T Consensus 124 ~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~---------------------------------~~~-------- 161 (260)
T cd08222 124 QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGS---------------------------------CDL-------- 161 (260)
T ss_pred HcCccccCCChhheEeec-CCEeecccCceeecCCC---------------------------------ccc--------
Confidence 999999999999999974 67999988876332100 000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....|++.|+|||.+.+..++.++|+||||
T Consensus 162 -------------------------------------------------~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG 192 (260)
T cd08222 162 -------------------------------------------------ATTFTGTPYYMSPEALKHQGYDSKSDIWSLG 192 (260)
T ss_pred -------------------------------------------------ccCCCCCcCccCHHHHccCCCCchhhHHHHH
Confidence 0013468889999999888889999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+++|+|++ ||...... .....+..+..+. +...+ +...+++.+||..+|++||++.++++||||
T Consensus 193 ~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 193 CILYEMCCLAHAFEGQNFL-SVVLRIVEGPTPS-LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred HHHHHHHhCCCCCCCccHH-HHHHHHHcCCCCC-CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 99999998 66544333 3333333333333 23333 345599999999999999999999999997
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-28 Score=250.23 Aligned_cols=196 Identities=17% Similarity=0.140 Sum_probs=150.2
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.+++||||+++++ ++... ..+++||| .+++|.+++... ...+++..++.++.||+.||.|||+.|++
T Consensus 48 ~e~~~l~~~~~~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ 122 (254)
T cd05083 48 EETAVMTKLHHKNLVRLLG-VILHN----GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLV 122 (254)
T ss_pred HHHHHHHhCCCCCcCeEEE-EEcCC----CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 5677899999999999999 44332 25899999 889999999543 33589999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+...... .
T Consensus 123 H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~-------------------------------------~----------- 154 (254)
T cd05083 123 HRDLAARNILVSEDGVAKVSDFGLARVGSMG-------------------------------------V----------- 154 (254)
T ss_pred ccccCcceEEEcCCCcEEECCCccceecccc-------------------------------------C-----------
Confidence 9999999999999999999988876321000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....+..|+|||.+.+..++.++|||||||++||
T Consensus 155 ---------------------------------------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~e 189 (254)
T cd05083 155 ---------------------------------------------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWE 189 (254)
T ss_pred ---------------------------------------------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHH
Confidence 00122457999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+..+..++......+...+|+.+||..+|..||++.+++.
T Consensus 190 l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 190 VFSYGRAPYPKMSLK-EVKECVEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred HHhCCCCCCccCCHH-HHHHHHhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 986 55544332 233333333222222222234459999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.3e-28 Score=252.22 Aligned_cols=202 Identities=19% Similarity=0.167 Sum_probs=155.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..++.+++||||+++++ ++.+. ..|++||| .+++|.+++.+....+++..++.++.||+.||+|||+.|+
T Consensus 54 ~~~e~~~l~~~~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ 128 (270)
T cd05056 54 FLQEAYIMRQFDHPHIVKLIG-VITEN----PVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRF 128 (270)
T ss_pred HHHHHHHHHhCCCCchhceeE-EEcCC----CcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 346778999999999999999 55443 46899999 8999999996655568999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++++|||.+....... +
T Consensus 129 ~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~----------------------------------~------------ 162 (270)
T cd05056 129 VHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES----------------------------------Y------------ 162 (270)
T ss_pred eccccChheEEEecCCCeEEccCceeeeccccc----------------------------------c------------
Confidence 999999999999999999999888763221000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
. ......++..|+|||.+....++.++|||||||++|
T Consensus 163 ------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 199 (270)
T cd05056 163 ------------------------Y-------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 199 (270)
T ss_pred ------------------------e-------------------ecCCCCccccccChhhhccCCCCchhhhHHHHHHHH
Confidence 0 000012456799999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++......+...+|+.+||.++|.+|||+.+++.
T Consensus 200 el~~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 200 EILMLGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred HHHHcCCCCCCCCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9886 67655443 233344443333322222345559999999999999999999885
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.6e-28 Score=251.16 Aligned_cols=204 Identities=13% Similarity=0.159 Sum_probs=156.3
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++.+++||||+++++ ++.... ..|++||| .+++|.+++......+++..+..++.|++.||+|||+.||+
T Consensus 54 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~ 129 (268)
T cd05063 54 LSEASIMGQFSHHNIIRLEG-VVTKFK---PAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYV 129 (268)
T ss_pred HHHHHHHhcCCCCCeeEEEE-EEccCC---CcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 36777899999999999999 554443 57999999 89999999966556689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++++|||++........ ..+
T Consensus 130 H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~-------------------------------~~~------------- 165 (268)
T cd05063 130 HRDLAARNILVNSNLECKVSDFGLSRVLEDDPE-------------------------------GTY------------- 165 (268)
T ss_pred ccccchhhEEEcCCCcEEECCCccceecccccc-------------------------------cce-------------
Confidence 999999999999999999999988743211000 000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.......++.|+|||++.+..++.++|||||||++||
T Consensus 166 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~e 202 (268)
T cd05063 166 -------------------------------------------TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWE 202 (268)
T ss_pred -------------------------------------------eccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHH
Confidence 0000123567999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||..... ......+......+......+...+|+.+||..+|.+||++.++++
T Consensus 203 ll~~g~~p~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 203 VMSFGERPYWDMSN-HEVMKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred HHhCCCCCCCcCCH-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 886 5544333 2344444444333333333445569999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-28 Score=255.61 Aligned_cols=205 Identities=20% Similarity=0.270 Sum_probs=159.8
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++++++||||+++++ .+..+. .+|+|||| .+++|.+++... .+++..+..++.||+.||.|||+.|++
T Consensus 50 ~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh~~~i~ 123 (277)
T cd06641 50 QQEITVLSQCDSPYVTKYYG-SYLKDT---KLWIIMEYLGGGSALDLLEPG--PLDETQIATILREILKGLDYLHSEKKI 123 (277)
T ss_pred HHHHHHHHhcCCCCEeEEEE-EEEeCC---eEEEEEEeCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHccCCee
Confidence 36777899999999999999 454443 57999999 889999998543 489999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++++|||.+...... ++
T Consensus 124 h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~----------------------------------~~------------- 156 (277)
T cd06641 124 HRDIKAANVLLSEHGEVKLADFGVAGQLTDT----------------------------------QI------------- 156 (277)
T ss_pred cCCCCHHhEEECCCCCEEEeecccceecccc----------------------------------hh-------------
Confidence 9999999999999999999998876321100 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......|+..|+|||.+.+..++.++|+|||||++|+
T Consensus 157 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~ 193 (277)
T cd06641 157 -------------------------------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE 193 (277)
T ss_pred -------------------------------------------hhccccCCccccChhhhccCCCCchhhHHHHHHHHHH
Confidence 0001357889999999988888999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+.... ++.+....+ ...+++.+||+.+|.+||++.++++||||...
T Consensus 194 l~~g~~p~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 194 LAKGEPPHSELHPM-KVLFLIPKNN-PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred HHcCCCCCCccchH-HHHHHHhcCC-CCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 999 44433322 2222232222 233333333 45599999999999999999999999999875
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.5e-28 Score=257.05 Aligned_cols=205 Identities=16% Similarity=0.172 Sum_probs=154.9
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHH
Q 004998 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~ 125 (720)
+..+|..++..+ +||||+++++ ++.... .+|++||| .+++|.++|.+. ...++...++.
T Consensus 66 ~~~~E~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (304)
T cd05101 66 DLVSEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVS 141 (304)
T ss_pred HHHHHHHHHHhhccCCCchheeE-EEecCC---ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHH
Confidence 344777788888 8999999999 554443 57999999 889999999542 12478889999
Q ss_pred HHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcc
Q 004998 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+||+++.++.++|+|||.++.......
T Consensus 142 ~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~----------------------------- 192 (304)
T cd05101 142 CTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDY----------------------------- 192 (304)
T ss_pred HHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceecccccc-----------------------------
Confidence 999999999999999999999999999999999999999988743321100
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC
Q 004998 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
.. ......+++.|+|||++.+
T Consensus 193 ----~~-------------------------------------------------------~~~~~~~~~~y~aPE~~~~ 213 (304)
T cd05101 193 ----YK-------------------------------------------------------KTTNGRLPVKWMAPEALFD 213 (304)
T ss_pred ----cc-------------------------------------------------------cccCCCCCceeeCchhhcc
Confidence 00 0000235678999999988
Q ss_pred CCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||... ........+.....+...........+|+.+||+++|.+||++.|+++
T Consensus 214 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~ 291 (304)
T cd05101 214 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVE 291 (304)
T ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCcccC-CHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 889999999999999999997 44433 233444444443322222223344559999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.6e-28 Score=253.21 Aligned_cols=203 Identities=19% Similarity=0.193 Sum_probs=149.1
Q ss_pred cccCCCCCceecccceeecCC-CCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Q 004998 71 LTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 71 Ls~l~HpnIV~l~~~~~~~~~-~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
+..++||||+++++.+...+. ....++++|||.+++|.+++... ...+++..++.++.||+.||.|||+.|++|+||+
T Consensus 55 l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~ 134 (287)
T cd07838 55 LESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLK 134 (287)
T ss_pred hhccCCCCcceEEEEEeeccCCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCC
Confidence 345579999999994443321 22348999999667899998543 3358999999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccC
Q 004998 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+||+++.++.++|+|||.+........
T Consensus 135 ~~nili~~~~~~~l~dfg~~~~~~~~~~---------------------------------------------------- 162 (287)
T cd07838 135 PQNILVTSDGQVKIADFGLARIYSFEMA---------------------------------------------------- 162 (287)
T ss_pred hhhEEEccCCCEEEeccCcceeccCCcc----------------------------------------------------
Confidence 9999999999999999987733211100
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc--
Q 004998 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt-- 306 (720)
.....++..|+|||++.+..++.++|||||||++|||++
T Consensus 163 ---------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~ 203 (287)
T cd07838 163 ---------------------------------------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRR 203 (287)
T ss_pred ---------------------------------------cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCC
Confidence 001246888999999998889999999999999999998
Q ss_pred -cCCCCchHHHHHHHhhcCC-----------------CCc----cc----cccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 307 -PFSTGEEKTRTMSSLRHRV-----------------LPP----QL----LLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 307 -pf~~~~~~~~~~~~l~~~~-----------------~p~----~~----~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||............+.... ++. .+ ....+...+||.+||..||.+||++.++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 204 PLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 4444333222111111000 000 00 011233458999999999999999999999
Q ss_pred Cccc
Q 004998 361 SEFL 364 (720)
Q Consensus 361 hp~~ 364 (720)
||||
T Consensus 284 ~~~~ 287 (287)
T cd07838 284 HPYF 287 (287)
T ss_pred CcCC
Confidence 9997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-28 Score=255.61 Aligned_cols=204 Identities=15% Similarity=0.136 Sum_probs=155.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------------CCCCCHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------------KRSVDVY 121 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------------~~~l~~~ 121 (720)
..+|..++++++||||+++++ ++..+. ..+++||| .+++|.+++... ...+++.
T Consensus 55 ~~~ei~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 130 (288)
T cd05050 55 FQREAALMAEFDHPNIVKLLG-VCAVGK---PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCT 130 (288)
T ss_pred HHHHHHHHHhcCCCchheEEE-EEcCCC---ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHH
Confidence 336788999999999999999 555443 57999999 889999999532 1247888
Q ss_pred HHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhh
Q 004998 122 ECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 122 ~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (720)
+++.++.||+.||.|||++|++||||||+||+++.++.++++|||.+........
T Consensus 131 ~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~------------------------- 185 (288)
T cd05050 131 EQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADY------------------------- 185 (288)
T ss_pred HHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCcc-------------------------
Confidence 9999999999999999999999999999999999999999999988743211100
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCc
Q 004998 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 281 (720)
+ . .......+..|+|||
T Consensus 186 --------~---~----------------------------------------------------~~~~~~~~~~y~aPE 202 (288)
T cd05050 186 --------Y---K----------------------------------------------------ASENDAIPIRWMPPE 202 (288)
T ss_pred --------c---c----------------------------------------------------ccCCCccChhhcCHH
Confidence 0 0 000012356799999
Q ss_pred cccCCCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHH
Q 004998 282 ELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGE 357 (720)
Q Consensus 282 ~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~e 357 (720)
.+.+..++.++|||||||++|||++ ||.+.... .....+.....++......+...+|+.+||..+|.+|||+.|
T Consensus 203 ~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~e 281 (288)
T cd05050 203 SIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE-EVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFAS 281 (288)
T ss_pred HHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHH
Confidence 9988889999999999999999986 55544333 344444444433322223345669999999999999999999
Q ss_pred HHc
Q 004998 358 LLQ 360 (720)
Q Consensus 358 iL~ 360 (720)
+++
T Consensus 282 l~~ 284 (288)
T cd05050 282 INR 284 (288)
T ss_pred HHH
Confidence 875
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.7e-28 Score=255.92 Aligned_cols=209 Identities=19% Similarity=0.266 Sum_probs=155.2
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..++++++||||+++++ ++.+.. ..|+||||.+++|.+++.. ....+++..++.++.||+.||.|||++||+|
T Consensus 50 ~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H 125 (294)
T PLN00009 50 REISLLKEMQHGNIVRLQD-VVHSEK---RLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLH 125 (294)
T ss_pred HHHHHHHhccCCCEeeEEE-EEecCC---eEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeC
Confidence 5778999999999999999 454443 6899999976789998844 3334688899999999999999999999999
Q ss_pred ccCCCCcEEEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 145 HNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 145 rDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
+||||+||+++. ++.+|++|||.+...+....
T Consensus 126 ~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~----------------------------------------------- 158 (294)
T PLN00009 126 RDLKPQNLLIDRRTNALKLADFGLARAFGIPVR----------------------------------------------- 158 (294)
T ss_pred CCCCcceEEEECCCCEEEEcccccccccCCCcc-----------------------------------------------
Confidence 999999999985 55789999888743221100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
......+++.|+|||.+.+. .++.++|||||||++|
T Consensus 159 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~ 195 (294)
T PLN00009 159 -------------------------------------------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFA 195 (294)
T ss_pred -------------------------------------------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHH
Confidence 00013568899999998764 4789999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhc--CC-----------------C---Ccc-----ccccCchHHHHHHHcCCCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRH--RV-----------------L---PPQ-----LLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~--~~-----------------~---p~~-----~~~~~p~~~~li~~~L~~dP~~R 352 (720)
+|++ ||............+.. .. . ++. .....+...+|+.+||+.+|++|
T Consensus 196 ~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R 275 (294)
T PLN00009 196 EMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKR 275 (294)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhC
Confidence 9999 55544333222222110 00 0 000 01123445599999999999999
Q ss_pred CChHHHHcCcccCCCc
Q 004998 353 PKMGELLQSEFLNEPR 368 (720)
Q Consensus 353 pta~eiL~hp~~~~~~ 368 (720)
|++.++++||||....
T Consensus 276 ps~~~~l~~~~~~~~~ 291 (294)
T PLN00009 276 ITARAALEHEYFKDLG 291 (294)
T ss_pred cCHHHHhcCchHhHHh
Confidence 9999999999998763
|
|
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-29 Score=268.03 Aligned_cols=224 Identities=16% Similarity=0.201 Sum_probs=182.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|..||...+.|.||++|. .|.+.. ++|+.||- .||.|...|+..+. +++..++.|+..+++|++|||++|||.
T Consensus 469 sEr~Im~~~~s~fIvrLYr-Tfrd~k---yvYmLmEaClGGElWTiLrdRg~-Fdd~tarF~~acv~EAfeYLH~k~iIY 543 (732)
T KOG0614|consen 469 SERNIMMECRSDFIVRLYR-TFRDSK---YVYMLMEACLGGELWTILRDRGS-FDDYTARFYVACVLEAFEYLHRKGIIY 543 (732)
T ss_pred hHHHHHHhcCchHHHHHHH-Hhccch---hhhhhHHhhcCchhhhhhhhcCC-cccchhhhhHHHHHHHHHHHHhcCcee
Confidence 4555788888999999999 454544 67999999 99999999976665 999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|.+++.+|.+||.|||+|+..|...
T Consensus 544 RDLKPENllLd~~Gy~KLVDFGFAKki~~g~------------------------------------------------- 574 (732)
T KOG0614|consen 544 RDLKPENLLLDNRGYLKLVDFGFAKKIGSGR------------------------------------------------- 574 (732)
T ss_pred ccCChhheeeccCCceEEeehhhHHHhccCC-------------------------------------------------
Confidence 9999999999999999999999885543321
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
+.-..+|||.|.|||++.+...+.++|.||||+++|||
T Consensus 575 ------------------------------------------KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~EL 612 (732)
T KOG0614|consen 575 ------------------------------------------KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYEL 612 (732)
T ss_pred ------------------------------------------ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHH
Confidence 01126899999999999999999999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCC-----ChHHHHcCcccCCC-ccchHHH
Q 004998 305 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRP-----KMGELLQSEFLNEP-RDSMEER 374 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~-~~~l~e~ 374 (720)
|+ ||.+.++. .++..|.+++-.-.++...++.+ +||+++...+|.+|. .+.+|-.|-||... +..+..+
T Consensus 613 L~G~pPFs~~dpm-ktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdweglr~~ 691 (732)
T KOG0614|consen 613 LTGSPPFSGVDPM-KTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGLRSR 691 (732)
T ss_pred HcCCCCCCCCchH-HHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhhhhc
Confidence 99 77766554 56666666665555556666666 999999999999997 48999999999987 4445544
Q ss_pred HHHHHHhhhhhH
Q 004998 375 EAAIELREQIDE 386 (720)
Q Consensus 375 ~~~~~~~e~~~~ 386 (720)
...+++.....+
T Consensus 692 ~L~pPi~~~va~ 703 (732)
T KOG0614|consen 692 TLPPPIIPSVAN 703 (732)
T ss_pred cCCCCccccCCC
Confidence 445555554443
|
|
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.6e-28 Score=257.92 Aligned_cols=207 Identities=15% Similarity=0.199 Sum_probs=159.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++..++||||+++++ .+.... ..|+|+|| .+++|.+++.+. .+++.++..++.||+.||.|||++|++
T Consensus 64 ~~e~~~l~~l~hp~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~gi~ 137 (293)
T cd06647 64 INEILVMRENKHPNIVNYLD-SYLVGD---ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVI 137 (293)
T ss_pred HHHHHHHhhcCCCCeeehhh-eeeeCC---cEEEEEecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 35677899999999999999 444433 57999999 899999999543 388999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........
T Consensus 138 H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~----------------------------------------------- 170 (293)
T cd06647 138 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS----------------------------------------------- 170 (293)
T ss_pred eccCCHHHEEEcCCCCEEEccCcceeccccccc-----------------------------------------------
Confidence 999999999999999999999987732211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......|++.|+|||.+.+..++.++|||||||++|+
T Consensus 171 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ 207 (293)
T cd06647 171 -------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 207 (293)
T ss_pred -------------------------------------------ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHH
Confidence 0001357889999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCcc-cccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQ-LLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~-~~~~-~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|++ ||.......... .+.....+.. .... .+...+|+.+||..+|.+||++.+++.||||....
T Consensus 208 ll~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 208 MVEGEPPYLNENPLRALY-LIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred HHhCCCCCCCCChhhhee-ehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 999 565543322211 1111111111 1112 23455999999999999999999999999999774
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-28 Score=256.38 Aligned_cols=209 Identities=17% Similarity=0.188 Sum_probs=154.0
Q ss_pred ehhhhccc-CCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCce
Q 004998 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIV 143 (720)
Q Consensus 66 ~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gIv 143 (720)
+|..++.. .+||||+++++ .+.++. .+|++|||.+++|..++......+++..+..++.||+.||.|||+ .||+
T Consensus 62 ~e~~~~~~~~~~~~i~~~~~-~~~~~~---~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~ 137 (296)
T cd06618 62 MDLDVVLKSHDCPYIVKCYG-YFITDS---DVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVI 137 (296)
T ss_pred HHHHHHHhccCCCchHhhhe-eeecCC---eEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEe
Confidence 34434444 45999999999 444443 579999997778888885544569999999999999999999997 6999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|+||+++.++.++|+|||.+.......
T Consensus 138 H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~------------------------------------------------ 169 (296)
T cd06618 138 HRDVKPSNILLDASGNVKLCDFGISGRLVDSK------------------------------------------------ 169 (296)
T ss_pred cCCCcHHHEEEcCCCCEEECccccchhccCCC------------------------------------------------
Confidence 99999999999999999999988763221100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC----CCccccchhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGV 299 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~s~~sDIwSLGv 299 (720)
......+++.|+|||.+.+.. ++.++|||||||
T Consensus 170 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~ 206 (296)
T cd06618 170 -------------------------------------------AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGI 206 (296)
T ss_pred -------------------------------------------cccCCCCCccccCHhhcCCCCCccccccchhHHHHHH
Confidence 000124678899999997653 789999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCcccc--ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL--LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~--~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
++|+|++ ||............+.....+.... .......+|+.+||+.||.+||++.++++||||.....
T Consensus 207 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 281 (296)
T cd06618 207 SLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYET 281 (296)
T ss_pred HHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccch
Confidence 9999999 5544333223333332222211111 12234569999999999999999999999999987633
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.6e-28 Score=251.29 Aligned_cols=207 Identities=14% Similarity=0.119 Sum_probs=155.7
Q ss_pred eehhhhcccCCCCCceecccceeecCC--CCCcEEEEEec-CCCCHHHHHhC-----CCCCCCHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~-~ggsL~~~L~~-----~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
.+|..+++.++||||+++++.++.... .....+++||| .+++|..++.. ....+++..++.++.||+.||.|
T Consensus 49 ~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~ 128 (273)
T cd05035 49 LSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEY 128 (273)
T ss_pred HHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHH
Confidence 366778999999999999994443321 22347999999 99999999832 12358999999999999999999
Q ss_pred HHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||++||+||||||+||++++++.+||+|||.++....... +
T Consensus 129 lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~---------------------------------~------ 169 (273)
T cd05035 129 LSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDY---------------------------------Y------ 169 (273)
T ss_pred HHhCCeeccccchheEEECCCCeEEECCccceeecccccc---------------------------------c------
Confidence 9999999999999999999999999999988743211100 0
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchh
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
. ......++..|+|||.+.+..++.++||||
T Consensus 170 -----------------------------~--------------------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~S 200 (273)
T cd05035 170 -----------------------------R--------------------QGRIAKMPVKWIAIESLADRVYTSKSDVWA 200 (273)
T ss_pred -----------------------------c--------------------ccccccCCccccCHhhcccCCCCcccchHH
Confidence 0 000012356799999998888999999999
Q ss_pred hhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 297 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 297 LGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++|||++ ||..... ......+.....++......+...+++.+||..||.+|||+.|++.
T Consensus 201 lG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~ 267 (273)
T cd05035 201 FGVTMWEIATRGQTPYPGVEN-HEIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLRE 267 (273)
T ss_pred HHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999999987 4544333 3444444444433333334455669999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.2e-28 Score=255.42 Aligned_cols=210 Identities=19% Similarity=0.225 Sum_probs=154.2
Q ss_pred eehhhhcccCCCCCceecccceeecCC-------CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEA-------AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~-------~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.+|..++.+++||||+++++ ++.+.. ....+|+++||.+++|.+++......+++..++.++.||+.||.||
T Consensus 54 ~~e~~~~~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L 132 (302)
T cd07864 54 IREIKILRQLNHRNIVNLKE-IVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYC 132 (302)
T ss_pred HHHHHHHHhCCCCCeeeeeh-eecCcchhhhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 35777899999999999999 443332 2236899999966688888865555699999999999999999999
Q ss_pred HHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|+.||+|+||||+||+++.++.+||+|||.+........
T Consensus 133 H~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~----------------------------------------- 171 (302)
T cd07864 133 HKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES----------------------------------------- 171 (302)
T ss_pred HhCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcc-----------------------------------------
Confidence 999999999999999999999999999987743211100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwS 296 (720)
. + .....++..|+|||.+.+. .++.++||||
T Consensus 172 --------------------------------------------~--~--~~~~~~~~~y~~PE~~~~~~~~~~~~Di~s 203 (302)
T cd07864 172 --------------------------------------------R--P--YTNKVITLWYRPPELLLGEERYGPAIDVWS 203 (302)
T ss_pred --------------------------------------------c--c--cccceeccCccChHHhcCCCCCCchhHHHH
Confidence 0 0 0002457789999988654 3789999999
Q ss_pred hhhhhhhccc---cCCCCchHHHH--HHHhhcCCCCcc--------------------------ccccCchHHHHHHHcC
Q 004998 297 LGVLLFELFC---PFSTGEEKTRT--MSSLRHRVLPPQ--------------------------LLLKFPKEASFCLWLL 345 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~--~~~l~~~~~p~~--------------------------~~~~~p~~~~li~~~L 345 (720)
|||++|||++ ||......... +........+.. +....+...+|+.+||
T Consensus 204 lG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 283 (302)
T cd07864 204 CGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHML 283 (302)
T ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHc
Confidence 9999999999 45433322111 111111111100 1112234459999999
Q ss_pred CCCCCCCCChHHHHcCccc
Q 004998 346 HPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 346 ~~dP~~Rpta~eiL~hp~~ 364 (720)
+.+|.+||++.+++.||||
T Consensus 284 ~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 284 TLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred cCChhhCCCHHHHhcCCCC
Confidence 9999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=6e-28 Score=252.67 Aligned_cols=200 Identities=15% Similarity=0.154 Sum_probs=150.6
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHHH
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIF 127 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i~ 127 (720)
..|..++.++ +||||+++++ ++.... .+|++||| .+++|.+++.... ..+++..++.++
T Consensus 43 ~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 118 (270)
T cd05047 43 AGELEVLCKLGHHPNIINLLG-ACEHRG---YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA 118 (270)
T ss_pred HHHHHHHHhhccCCCeeeEEE-EEecCC---CceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHH
Confidence 3577788888 8999999999 444433 46999999 8999999995321 247899999999
Q ss_pred HHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccc
Q 004998 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||+|||+.|++||||||+||+++.++.++++|||++......
T Consensus 119 ~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~--------------------------------- 165 (270)
T cd05047 119 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY--------------------------------- 165 (270)
T ss_pred HHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchh---------------------------------
Confidence 99999999999999999999999999999999999988876211000
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC
Q 004998 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
. .......+..|+|||++.+..
T Consensus 166 ----~------------------------------------------------------~~~~~~~~~~y~apE~~~~~~ 187 (270)
T cd05047 166 ----V------------------------------------------------------KKTMGRLPVRWMAIESLNYSV 187 (270)
T ss_pred ----h------------------------------------------------------hccCCCCccccCChHHHccCC
Confidence 0 000012356799999998888
Q ss_pred CCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++.++|||||||++|||++ ||...... .....+.....++......+...+|+.+||..+|.+|||+.++++
T Consensus 188 ~~~~~Di~slG~il~el~~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 188 YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred CCchhhHHHHHHHHHHHHcCCCCCccccCHH-HHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 9999999999999999996 66443322 233333333222222223345569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=99.95 E-value=8e-28 Score=250.16 Aligned_cols=201 Identities=13% Similarity=0.130 Sum_probs=152.8
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++++++||||+++++ ++... ..+++||| .+++|.+++.. ....+++..+..++.||+.||.|||+.||
T Consensus 49 ~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i 123 (260)
T cd05069 49 LQEAQIMKKLRHDKLVPLYA-VVSEE----PIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNY 123 (260)
T ss_pred HHHHHHHHhCCCCCeeeEEE-EEcCC----CcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 35777999999999999998 44322 46899999 88899999954 33458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||++++++.++|+|||.+.........
T Consensus 124 ~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------- 158 (260)
T cd05069 124 IHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT--------------------------------------------- 158 (260)
T ss_pred eecccCcceEEEcCCCeEEECCCccceEccCCccc---------------------------------------------
Confidence 99999999999999999999988877332111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+..++.++|||||||++|
T Consensus 159 --------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~ 194 (260)
T cd05069 159 --------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 194 (260)
T ss_pred --------------------------------------------ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHH
Confidence 000023467799999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+.....++......+...+|+.+||.+||.+||+++++++
T Consensus 195 el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 195 ELVTKGRVPYPGMVNR-EVLEQVERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 9997 55544332 334444443322222222234459999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.8e-28 Score=248.01 Aligned_cols=203 Identities=18% Similarity=0.217 Sum_probs=153.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++++++||||+++++ ++.... ..+++||| .|++|.+++.+....+++..++.++.|++.||.|||++|++
T Consensus 40 ~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~ 115 (251)
T cd05041 40 LQEAEILKQYDHPNIVKLIG-VCVQKQ---PIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCI 115 (251)
T ss_pred HHHHHHHHhCCCCCeEEEEE-EEecCC---CeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 35677899999999999999 454443 57999999 89999999966555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+....... +
T Consensus 116 h~di~p~nili~~~~~~~l~d~g~~~~~~~~~----------------------------------~------------- 148 (251)
T cd05041 116 HRDLAARNCLVGENNVLKISDFGMSREEEGGI----------------------------------Y------------- 148 (251)
T ss_pred hhhcCcceEEEcCCCcEEEeeccccccccCCc----------------------------------c-------------
Confidence 99999999999999999999998874321100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
........++..|+|||.+.+..++.++|||||||++||
T Consensus 149 -----------------------------------------~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~ 187 (251)
T cd05041 149 -----------------------------------------TVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWE 187 (251)
T ss_pred -----------------------------------------eeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHH
Confidence 000000123556999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+......+......+...+|+.+||..+|.+|||+.|+++
T Consensus 188 l~t~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 188 TFSLGDTPYPGMSNQ-QTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred HHhccCCCCccCCHH-HHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 997 45444332 223333322211111122234559999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.3e-28 Score=250.25 Aligned_cols=201 Identities=14% Similarity=0.116 Sum_probs=153.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++.+++||||+++++ .+... ..|++||| .+++|.+++.+ .+..+++..++.++.||+.||.|||+.||
T Consensus 49 ~~E~~~l~~l~~~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i 123 (262)
T cd05071 49 LQEAQVMKKLRHEKLVQLYA-VVSEE----PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNY 123 (262)
T ss_pred HHHHHHHHhCCCCCcceEEE-EECCC----CcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 46777999999999999998 44332 46899999 88999999954 33458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+....... +.
T Consensus 124 ~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~----------------------------------~~----------- 158 (262)
T cd05071 124 VHRDLRAANILVGENLVCKVADFGLARLIEDNE----------------------------------YT----------- 158 (262)
T ss_pred cccccCcccEEEcCCCcEEeccCCceeeccccc----------------------------------cc-----------
Confidence 999999999999999999999998874321110 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||++.+..++.++|||||||++|
T Consensus 159 --------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ 194 (262)
T cd05071 159 --------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 194 (262)
T ss_pred --------------------------------------------cccCCcccceecCHhHhccCCCCchhhHHHHHHHHH
Confidence 000023567899999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+......+......+...+|+.+||+++|++||++.++++
T Consensus 195 ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 195 ELTTKGRVPYPGMVNR-EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred HHHcCCCCCCCCCChH-HHHHHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 9998 56544333 333333333222222222334559999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=256.99 Aligned_cols=203 Identities=16% Similarity=0.174 Sum_probs=152.1
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHHHH
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIF 127 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~i~ 127 (720)
..|..++.++ +||||+++++ ++.... .+|++||| .+++|.+++... ...+++.++..++
T Consensus 65 ~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 140 (314)
T cd05099 65 ISEMELMKLIGKHKNIINLLG-VCTQEG---PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCA 140 (314)
T ss_pred HHHHHHHHhccCCCCeeeEEE-EEccCC---ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHH
Confidence 3567788888 6999999999 554432 57999999 899999999432 1348899999999
Q ss_pred HHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccc
Q 004998 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||.|||++||+||||||+|||++.++.+||+|||.++.......
T Consensus 141 ~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~------------------------------- 189 (314)
T cd05099 141 YQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDY------------------------------- 189 (314)
T ss_pred HHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEcccccccccccccc-------------------------------
Confidence 9999999999999999999999999999999999999988743211000
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC
Q 004998 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
. . ......++..|+|||++.+..
T Consensus 190 --~--------------------------------------------------~-----~~~~~~~~~~y~aPE~~~~~~ 212 (314)
T cd05099 190 --Y--------------------------------------------------K-----KTSNGRLPVKWMAPEALFDRV 212 (314)
T ss_pred --c--------------------------------------------------c-----ccccCCCCccccCHHHHccCC
Confidence 0 0 000012356799999998888
Q ss_pred CCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++.++|||||||++|||++ ||..... ......+.....+........+..+|+.+||..+|++|||+.++++
T Consensus 213 ~~~~~DiwslG~~l~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~ 288 (314)
T cd05099 213 YTHQSDVWSFGILMWEIFTLGGSPYPGIPV-EELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE 288 (314)
T ss_pred cCccchhhHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 9999999999999999997 4544332 2334444433322222222234569999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.4e-28 Score=262.06 Aligned_cols=206 Identities=19% Similarity=0.222 Sum_probs=152.9
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------------------
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------------------- 115 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------------------------- 115 (720)
.+|..+|.++ +||||+++++.+...+ ..++++||| .+++|.+++....
T Consensus 58 ~~E~~~l~~l~~h~niv~~~~~~~~~~---~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (343)
T cd05103 58 MSELKILIHIGHHLNVVNLLGACTKPG---GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDL 134 (343)
T ss_pred HHHHHHHHhccCCccHhhhcceeecCC---CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhh
Confidence 3677788888 6899999999433332 257899999 9999999984321
Q ss_pred ---------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEcc
Q 004998 116 ---------------------------------------RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSS 156 (720)
Q Consensus 116 ---------------------------------------~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~ 156 (720)
..++...+..++.||+.||.|||++||+||||||+|||++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~ 214 (343)
T cd05103 135 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 214 (343)
T ss_pred hhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcC
Confidence 23677888999999999999999999999999999999999
Q ss_pred CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcccccc
Q 004998 157 FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHV 236 (720)
Q Consensus 157 ~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~ 236 (720)
++.++|+|||++....... .+
T Consensus 215 ~~~~kl~dfg~~~~~~~~~---------------------------------~~-------------------------- 235 (343)
T cd05103 215 NNVVKICDFGLARDIYKDP---------------------------------DY-------------------------- 235 (343)
T ss_pred CCcEEEEecccccccccCc---------------------------------ch--------------------------
Confidence 9999999999874321110 00
Q ss_pred ccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc----cCCCCc
Q 004998 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGE 312 (720)
Q Consensus 237 ~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~ 312 (720)
. ......+++.|+|||.+.+..++.++|||||||++|+|++ ||....
T Consensus 236 -----------~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 286 (343)
T cd05103 236 -----------V------------------RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 286 (343)
T ss_pred -----------h------------------hcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcc
Confidence 0 0000234677999999988889999999999999999986 555433
Q ss_pred hHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 313 EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 313 ~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
........+..+..++......+...+++.+||+.||++|||+.||++|
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 287 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred ccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 2223333333333222222233566799999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.8e-28 Score=257.38 Aligned_cols=204 Identities=17% Similarity=0.172 Sum_probs=154.1
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHH
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHI 126 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i 126 (720)
...|..++..+ +||||+++++ ++.... .+|++||| .+++|.++|.... ..+++.+++.+
T Consensus 70 ~~~e~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 145 (307)
T cd05098 70 LISEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSC 145 (307)
T ss_pred HHHHHHHHHHhcCCCCEeeEEE-EEecCC---ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHH
Confidence 33577788888 7999999999 554443 57999999 8899999995421 24888999999
Q ss_pred HHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004998 127 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 127 ~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
+.||+.||+|||++|++||||||+||+++.++.++|+|||.+......
T Consensus 146 ~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~-------------------------------- 193 (307)
T cd05098 146 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI-------------------------------- 193 (307)
T ss_pred HHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCccccccccc--------------------------------
Confidence 999999999999999999999999999999999999999887432110
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004998 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
++.. ......+++.|+|||.+.+.
T Consensus 194 --~~~~------------------------------------------------------~~~~~~~~~~y~aPE~~~~~ 217 (307)
T cd05098 194 --DYYK------------------------------------------------------KTTNGRLPVKWMAPEALFDR 217 (307)
T ss_pred --chhh------------------------------------------------------ccccCCCccceeChHHhccC
Confidence 0000 00001245689999999888
Q ss_pred CCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++.++|||||||++|||++ ||... ........+.....++......+...+|+.+||+.+|.+||++.++++
T Consensus 218 ~~~~~~DvwslG~~l~el~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~ 294 (307)
T cd05098 218 IYTHQSDVWSFGVLLWEIFTLGGSPYPGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 294 (307)
T ss_pred CCCcHHHHHHHHHHHHHHHcCCCCCCCcC-CHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 89999999999999999987 45433 333444444444333322223345569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.2e-28 Score=252.91 Aligned_cols=208 Identities=19% Similarity=0.139 Sum_probs=150.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|++++||||+++++.++..+ ...++++||| .+++|.+++.+....+++..++.++.||+.||.|||++||
T Consensus 52 ~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i 129 (284)
T cd05081 52 FEREIEILKSLQHDNIVKYKGVCYSAG--RRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRY 129 (284)
T ss_pred HHHHHHHHHhCCCCCeeEEEEEEccCC--CCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346778999999999999999433322 2357999999 8999999996554558999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||++....... ++
T Consensus 130 ~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~------------ 164 (284)
T cd05081 130 VHRDLATRNILVESENRVKIGDFGLTKVLPQDK---------------------------------EY------------ 164 (284)
T ss_pred eeccCCHhhEEECCCCeEEECCCcccccccCCC---------------------------------cc------------
Confidence 999999999999999999999988874321100 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
... .....++..|+|||.+.+..++.++|||||||++|
T Consensus 165 ----------------------~~~--------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 202 (284)
T cd05081 165 ----------------------YKV--------------------REPGESPIFWYAPESLTESKFSVASDVWSFGVVLY 202 (284)
T ss_pred ----------------------eee--------------------cCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHH
Confidence 000 00012345699999998888999999999999999
Q ss_pred hcccc---CCCCchH---------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFCP---FSTGEEK---------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLltp---f~~~~~~---------------~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++. +...... ......+.....++......+...+|+.+||.++|++|||+.|+++
T Consensus 203 el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 203 ELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred HHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99982 2111100 0011111122222222222234559999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.7e-28 Score=248.19 Aligned_cols=205 Identities=20% Similarity=0.253 Sum_probs=161.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+...|..++++++||||+++++.++. . ...|++||| .+++|.+++.+ ....+++..++.++.||+.||.|||
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~~~~~-~---~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh 120 (256)
T cd08530 45 DAVNEIRILASVNHPNIISYKEAFLD-G---NKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH 120 (256)
T ss_pred HHHHHHHHHHhCCCCCchhhhhhhcc-C---CEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 33467788999999999999994443 3 368999999 89999999944 2345899999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.|++|+||+|+||+++.++.++++|||.+...... +
T Consensus 121 ~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-----------------------------------~-------- 157 (256)
T cd08530 121 EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN-----------------------------------M-------- 157 (256)
T ss_pred hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-----------------------------------C--------
Confidence 999999999999999999999999998877322110 0
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....|++.|+|||.+.+..++.++|+||||
T Consensus 158 -------------------------------------------------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG 188 (256)
T cd08530 158 -------------------------------------------------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLG 188 (256)
T ss_pred -------------------------------------------------cccccCCccccCHHHHCCCCCCchhhHHHHH
Confidence 0002468889999999988899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+++|+|++ ||...... .....+.....++..........+++.+||+.+|.+||++.++++||++
T Consensus 189 ~~~~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~ 256 (256)
T cd08530 189 CLLYEMATFAPPFEARSMQ-DLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256 (256)
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHhcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence 99999998 56554433 3333344444444333333455699999999999999999999999985
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=248.98 Aligned_cols=201 Identities=16% Similarity=0.157 Sum_probs=155.3
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..|..++..++||||+++++ ++.... .++++||| .+++|.+++.. .+..+++..++.++.||+.||.|||++||
T Consensus 50 ~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i 125 (261)
T cd05148 50 QKEVQALKRLRHKHLISLFA-VCSVGE---PVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNS 125 (261)
T ss_pred HHHHHHHhcCCCcchhheee-eEecCC---CeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 36777899999999999999 554443 57999999 88999999954 34458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+....... +
T Consensus 126 ~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~----------------------------------~------------ 159 (261)
T cd05148 126 IHRDLAARNILVGEDLVCKVADFGLARLIKEDV----------------------------------Y------------ 159 (261)
T ss_pred eccccCcceEEEcCCceEEEccccchhhcCCcc----------------------------------c------------
Confidence 999999999999999999999998874321110 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
. .....++..|+|||.+.+..++.++|||||||++|
T Consensus 160 --~------------------------------------------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~ 195 (261)
T cd05148 160 --L------------------------------------------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLY 195 (261)
T ss_pred --c------------------------------------------ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHH
Confidence 0 00023467899999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|++ ||...... .....+.....++......+...+++.+||..||.+|||+.++++
T Consensus 196 ~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~ 256 (261)
T cd05148 196 EMFTYGQVPYPGMNNH-EVYDQITAGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALRE 256 (261)
T ss_pred HHHcCCCCCCCcCCHH-HHHHHHHhCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 9997 55544332 333333333333333333345569999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.4e-28 Score=248.53 Aligned_cols=202 Identities=15% Similarity=0.189 Sum_probs=153.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++.+++||||+++++ ++.... .++++||| .+++|.+++......+++..++.++.|++.||.|||+.|++
T Consensus 47 ~~e~~~l~~l~~~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~ 122 (256)
T cd05112 47 IEEAQVMMKLSHPKLVQLYG-VCTERS---PICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVI 122 (256)
T ss_pred HHHHHHHHhCCCCCeeeEEE-EEccCC---ceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 35777999999999999999 444433 57999999 89999999965555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+...+.....
T Consensus 123 h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~---------------------------------------------- 156 (256)
T cd05112 123 HRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT---------------------------------------------- 156 (256)
T ss_pred ccccccceEEEcCCCeEEECCCcceeecccCccc----------------------------------------------
Confidence 9999999999999999999998877432111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||.+.+..++.++|||||||++||
T Consensus 157 -------------------------------------------~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~e 193 (256)
T cd05112 157 -------------------------------------------SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWE 193 (256)
T ss_pred -------------------------------------------ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHH
Confidence 0000134668999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||..... ......+.....+...........+|+.+||+.+|++|||+.++++
T Consensus 194 l~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~ 253 (256)
T cd05112 194 VFSEGKTPYENRSN-SEVVETINAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLH 253 (256)
T ss_pred HHcCCCCCCCcCCH-HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 997 5544332 2333444432221111112234459999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.4e-28 Score=254.76 Aligned_cols=208 Identities=18% Similarity=0.317 Sum_probs=161.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+++.++||||+++++ .+.... ..|++||| .+++|.+++... .+++..++.++.||+.||.|||+.||
T Consensus 64 ~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~gi 137 (292)
T cd06657 64 LFNEVVIMRDYQHENVVEMYN-SYLVGD---ELWVVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLKALSVLHAQGV 137 (292)
T ss_pred HHHHHHHHHhcCCcchhheee-EEEeCC---EEEEEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346778899999999999999 554443 67999999 899999988443 38999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++++|||.+...... +
T Consensus 138 vH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~-----------------------------------~------------ 170 (292)
T cd06657 138 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE-----------------------------------V------------ 170 (292)
T ss_pred ecCCCCHHHEEECCCCCEEEcccccceecccc-----------------------------------c------------
Confidence 99999999999999999999999876321100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.......|++.|+|||.+.+..++.++|+|||||++|
T Consensus 171 -------------------------------------------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~ 207 (292)
T cd06657 171 -------------------------------------------PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVI 207 (292)
T ss_pred -------------------------------------------ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHH
Confidence 0000135788999999998878899999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCcc---ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~---~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|++ ||...... .....+... .++. .....+...+++.+||..+|.+||++.+++.||||.....
T Consensus 208 el~tg~~p~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 208 EMVDGEPPYFNEPPL-KAMKMIRDN-LPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred HHHhCCCCCCCCCHH-HHHHHHHhh-CCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence 9998 56544332 222233222 2222 2223355569999999999999999999999999998754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.5e-28 Score=285.26 Aligned_cols=220 Identities=19% Similarity=0.318 Sum_probs=152.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC----------CCCCCHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----------KRSVDVYECLHIFRQIV 131 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~----------~~~l~~~~~~~i~~QIl 131 (720)
|..+|..++++++||||+++++ ++.+.. ..|++||| .|++|.+++... ...++...++.++.||+
T Consensus 48 rflrEi~ILs~L~HPNIVkl~~-v~~d~~---~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa 123 (932)
T PRK13184 48 RFLREAKIAADLIHPGIVPVYS-ICSDGD---PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKIC 123 (932)
T ss_pred HHHHHHHHHHhCCCcCcCeEEE-EEeeCC---EEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHH
Confidence 4447888999999999999999 554443 57999999 999999998431 12355678899999999
Q ss_pred HHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccc
Q 004998 132 EIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 132 ~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
.||+|||++||+||||||+|||++.++.++|+|||++.......... .+.
T Consensus 124 ~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~-----------------------------~~l- 173 (932)
T PRK13184 124 ATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDL-----------------------------LDI- 173 (932)
T ss_pred HHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccc-----------------------------ccc-
Confidence 99999999999999999999999999999999999985542110000 000
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcc
Q 004998 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~ 291 (720)
.... ...+ ... .......+||+.|+|||++.+..++.+
T Consensus 174 --~~~~----~~s~-----------------------------------~s~-~t~~g~~vGT~~YmAPE~l~g~~~S~k 211 (932)
T PRK13184 174 --DVDE----RNIC-----------------------------------YSS-MTIPGKIVGTPDYMAPERLLGVPASES 211 (932)
T ss_pred --cccc----cccc-----------------------------------ccc-cccCCCCCCCCCCCCHHHhcCCCCCcH
Confidence 0000 0000 000 000012479999999999999999999
Q ss_pred ccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccc--cccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL--LLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~--~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||||||++|||++ ||.............. ..|... ....| ...+++.+||.+||++||+..+.+.
T Consensus 212 SDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i--~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl 284 (932)
T PRK13184 212 TDIYALGVILYQMLTLSFPYRRKKGRKISYRDVI--LSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK 284 (932)
T ss_pred hHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhc--cChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 999999999999999 6654332211111111 111111 12233 3459999999999999987655543
|
|
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=250.82 Aligned_cols=206 Identities=19% Similarity=0.266 Sum_probs=154.7
Q ss_pred eeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|...+.+++ ||||+++++ ++.++ ...|+||||.+++|.+++.... ..+++..++.++.||+.+|.|||++|
T Consensus 44 ~~~e~~~l~~~~~h~~i~~~~~-~~~~~---~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~ 119 (283)
T cd07830 44 NLREVKSLRKLNEHPNIVKLKE-VFREN---DELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG 119 (283)
T ss_pred HHHHHHHHHhccCCCCchhHHH-HhhcC---CcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 345777888999 999999999 44443 3679999998889999985443 45899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+|+||+|+||+++.++.++|+|||.+.......
T Consensus 120 i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~---------------------------------------------- 153 (283)
T cd07830 120 FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP---------------------------------------------- 153 (283)
T ss_pred cccCCCChhhEEEcCCCCEEEeecccceeccCCC----------------------------------------------
Confidence 9999999999999999999999988763211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvl 300 (720)
......++..|+|||++.+. .++.++||||||++
T Consensus 154 ---------------------------------------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~ 188 (283)
T cd07830 154 ---------------------------------------------PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCI 188 (283)
T ss_pred ---------------------------------------------CcCCCCCcccccCceeeecCcCcCCccchhhHHHH
Confidence 00013578899999988554 47999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhh--cC------------------CCC--------ccccccCchHHHHHHHcCCCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLR--HR------------------VLP--------PQLLLKFPKEASFCLWLLHPEP 349 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~--~~------------------~~p--------~~~~~~~p~~~~li~~~L~~dP 349 (720)
+|||++ ||.............. .. .++ ..+....+...+|+.+||+.+|
T Consensus 189 l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p 268 (283)
T cd07830 189 MAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDP 268 (283)
T ss_pred HHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCc
Confidence 999999 4544333222211110 00 000 0011123455699999999999
Q ss_pred CCCCChHHHHcCccc
Q 004998 350 SGRPKMGELLQSEFL 364 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~ 364 (720)
++|||+.|++.||||
T Consensus 269 ~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 269 KKRPTASQALQHPYF 283 (283)
T ss_pred ccCCCHHHHhhCCCC
Confidence 999999999999997
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=253.20 Aligned_cols=204 Identities=16% Similarity=0.183 Sum_probs=154.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-----------------------CCCCC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-----------------------KRSVD 119 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-----------------------~~~l~ 119 (720)
...|..+|+.++||||+++++ .+.... ..+++||| .+++|.+++... ...++
T Consensus 50 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 125 (290)
T cd05045 50 LLSEFNLLKQVNHPHVIKLYG-ACSQDG---PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALT 125 (290)
T ss_pred HHHHHHHHhhCCCCCEeeEEE-EEecCC---CcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccC
Confidence 446788999999999999999 444433 46899999 889999998431 13478
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhH
Q 004998 120 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 199 (720)
Q Consensus 120 ~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (720)
+..++.++.||+.||.|||+.||+||||||+|||+++++.++|+|||.++......
T Consensus 126 ~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~------------------------ 181 (290)
T cd05045 126 MGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEED------------------------ 181 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCcc------------------------
Confidence 99999999999999999999999999999999999999999999998874321100
Q ss_pred hhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccC
Q 004998 200 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 279 (720)
Q Consensus 200 ~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 279 (720)
+. .......++..|+|
T Consensus 182 ---------~~-------------------------------------------------------~~~~~~~~~~~y~a 197 (290)
T cd05045 182 ---------SY-------------------------------------------------------VKRSKGRIPVKWMA 197 (290)
T ss_pred ---------ch-------------------------------------------------------hcccCCCCCccccC
Confidence 00 00000234668999
Q ss_pred CccccCCCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCCh
Q 004998 280 PEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKM 355 (720)
Q Consensus 280 PE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta 355 (720)
||.+.+..++.++|||||||++|||++ ||..... ......+.....++..........+|+.+||+++|.+||++
T Consensus 198 pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~ 276 (290)
T cd05045 198 IESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP-ERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTF 276 (290)
T ss_pred HHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH-HHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCH
Confidence 999988889999999999999999997 5654433 23344444333222222233455699999999999999999
Q ss_pred HHHHc
Q 004998 356 GELLQ 360 (720)
Q Consensus 356 ~eiL~ 360 (720)
.+++.
T Consensus 277 ~~i~~ 281 (290)
T cd05045 277 ADISK 281 (290)
T ss_pred HHHHH
Confidence 99975
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.2e-27 Score=251.34 Aligned_cols=207 Identities=19% Similarity=0.211 Sum_probs=154.9
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
+|..++.+++||||+++++ ++.... ....+++|||.+++|.+++......+++..++.++.||+.||.|||++|++|+
T Consensus 47 ~e~~~l~~l~~~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~ 124 (287)
T cd07840 47 REIKLLQKLRHPNIVRLKE-IVTSKG-KGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHR 124 (287)
T ss_pred HHHHHHHhccCCCeeehee-eEecCC-CCcEEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Confidence 5777899999999999999 443331 23689999996679999996654569999999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+||+++.++.++++|||.+........
T Consensus 125 dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~------------------------------------------------- 155 (287)
T cd07840 125 DIKGSNILINNDGVLKLADFGLARPYTKRNS------------------------------------------------- 155 (287)
T ss_pred cCcHHHeEEcCCCCEEEccccceeeccCCCc-------------------------------------------------
Confidence 9999999999999999999988743211100
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhhhc
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~eL 304 (720)
.......++..|+|||.+.+. .++.++|||||||++|||
T Consensus 156 ----------------------------------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el 195 (287)
T cd07840 156 ----------------------------------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAEL 195 (287)
T ss_pred ----------------------------------------ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHH
Confidence 000012467889999987654 479999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcC--CC-----------------------C----cccccc-CchHHHHHHHcCCCCCCC
Q 004998 305 FC---PFSTGEEKTRTMSSLRHR--VL-----------------------P----PQLLLK-FPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~--~~-----------------------p----~~~~~~-~p~~~~li~~~L~~dP~~ 351 (720)
++ ||....... ....+... .. + ..+... .+...+++.+||..+|.+
T Consensus 196 ~t~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~ 274 (287)
T cd07840 196 FLGKPIFQGSTELE-QLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKK 274 (287)
T ss_pred HhCCCCCCCCChHH-HHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhh
Confidence 99 555443321 11111110 00 0 001111 334459999999999999
Q ss_pred CCChHHHHcCccc
Q 004998 352 RPKMGELLQSEFL 364 (720)
Q Consensus 352 Rpta~eiL~hp~~ 364 (720)
||++.++++||||
T Consensus 275 Rp~~~~~l~~~~~ 287 (287)
T cd07840 275 RISADQALQHEYF 287 (287)
T ss_pred CcCHHHHhhCcCC
Confidence 9999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=249.03 Aligned_cols=206 Identities=14% Similarity=0.179 Sum_probs=153.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++.+++||||+++++ ++..+. .++++||| .+++|.+++......+++.+++.++.|++.||.|||++|++
T Consensus 53 ~~e~~~l~~l~h~ni~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~ 128 (269)
T cd05065 53 LSEASIMGQFDHPNIIHLEG-VVTKSR---PVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYV 128 (269)
T ss_pred HHHHHHHHhCCCcCcceEEE-EECCCC---ceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 36777899999999999999 444433 57999999 88999999966555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++++|||.+......... ..+
T Consensus 129 H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~------------------------------~~~------------- 165 (269)
T cd05065 129 HRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD------------------------------PTY------------- 165 (269)
T ss_pred ecccChheEEEcCCCcEEECCCccccccccCccc------------------------------ccc-------------
Confidence 9999999999999999999998876432111000 000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
. .......+..|+|||.+.+..++.++|||||||++||
T Consensus 166 -----------------------~-------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e 203 (269)
T cd05065 166 -----------------------T-------------------SSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWE 203 (269)
T ss_pred -----------------------c-------------------cccCCCcceeecCHhHhccCcccchhhhhhhHHHHHH
Confidence 0 0000112457999999998889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+......+......+...+++.+||..+|.+||++.+++.
T Consensus 204 ~l~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 204 VMSYGERPYWDMSNQ-DVINAIEQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred HhcCCCCCCCCCCHH-HHHHHHHcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 875 56544333 333333332222222222234459999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.2e-28 Score=264.27 Aligned_cols=200 Identities=18% Similarity=0.219 Sum_probs=159.0
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+.++.+++|||||++||+..... ++|+|||+ .||+|.++|++.+..++..+...++.+.+.||+|||++++||
T Consensus 210 ~EArvMr~l~H~NVVr~yGVa~~~~----Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IH 285 (474)
T KOG0194|consen 210 KEARVMRQLNHPNVVRFYGVAVLEE----PLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIH 285 (474)
T ss_pred HHHHHHHhCCCCCEEEEEEEEcCCC----ccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcc
Confidence 8899999999999999999444333 68999999 999999999777667999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||-..|+|++.++.+||+|||+++.-..... ..+
T Consensus 286 RDIAARNcL~~~~~~vKISDFGLs~~~~~~~~-------------------------------~~~-------------- 320 (474)
T KOG0194|consen 286 RDIAARNCLYSKKGVVKISDFGLSRAGSQYVM-------------------------------KKF-------------- 320 (474)
T ss_pred hhHhHHHheecCCCeEEeCccccccCCcceee-------------------------------ccc--------------
Confidence 99999999999999999999888632100000 000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
. .--...|+|||.+....|++++|||||||++||+
T Consensus 321 ------------------------------------~---------~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Ei 355 (474)
T KOG0194|consen 321 ------------------------------------L---------KKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEI 355 (474)
T ss_pred ------------------------------------c---------ccCcceecChhhhccCccccccchhheeeeEEee
Confidence 0 0114569999999998999999999999999999
Q ss_pred cc----cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHc
Q 004998 305 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 305 lt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++ ||.+.... .+...+....++...+...|.+. .++..|+..+|++||++.++.+
T Consensus 356 f~~g~~Py~g~~~~-~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~ 415 (474)
T KOG0194|consen 356 FENGAEPYPGMKNY-EVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKK 415 (474)
T ss_pred eccCCCCCCCCCHH-HHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence 98 78776655 44445533223333333555554 8889999999999999999875
|
|
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.6e-28 Score=259.10 Aligned_cols=210 Identities=17% Similarity=0.184 Sum_probs=156.7
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
.|..++.+++||||+++++.+..... .+|++|||.+++|.+++... .+++..+..++.||+.||.|||++||+||
T Consensus 58 ~E~~~l~~l~hpniv~~~~~~~~~~~---~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~iiH~ 132 (328)
T cd07856 58 RELKLLKHLRHENIISLSDIFISPLE---DIYFVTELLGTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYVHSAGVVHR 132 (328)
T ss_pred HHHHHHHhcCCCCeeeEeeeEecCCC---cEEEEeehhccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 57779999999999999994333232 57899999888999988543 38899999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+||+++.++.++|+|||.+......
T Consensus 133 dl~p~Nili~~~~~~~l~dfg~~~~~~~~--------------------------------------------------- 161 (328)
T cd07856 133 DLKPSNILINENCDLKICDFGLARIQDPQ--------------------------------------------------- 161 (328)
T ss_pred CCCHHHEeECCCCCEEeCccccccccCCC---------------------------------------------------
Confidence 99999999999999999988876321000
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhhhhc
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~eL 304 (720)
.....+++.|+|||.+.+ ..++.++|||||||++|+|
T Consensus 162 ------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el 199 (328)
T cd07856 162 ------------------------------------------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEM 199 (328)
T ss_pred ------------------------------------------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHH
Confidence 001356788999999866 4589999999999999999
Q ss_pred cc---cCCCCchHHHH--HHH------------------------hhcC-CCCc-cccc-cCchHHHHHHHcCCCCCCCC
Q 004998 305 FC---PFSTGEEKTRT--MSS------------------------LRHR-VLPP-QLLL-KFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 305 lt---pf~~~~~~~~~--~~~------------------------l~~~-~~p~-~~~~-~~p~~~~li~~~L~~dP~~R 352 (720)
++ ||......... ... +... ..|. .... ..+...++|.+||..+|++|
T Consensus 200 ~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 279 (328)
T cd07856 200 LEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKR 279 (328)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhC
Confidence 99 55443221100 000 0000 0000 0111 22345699999999999999
Q ss_pred CChHHHHcCcccCCCccchHH
Q 004998 353 PKMGELLQSEFLNEPRDSMEE 373 (720)
Q Consensus 353 pta~eiL~hp~~~~~~~~l~e 373 (720)
||+.+++.||||.....+..+
T Consensus 280 ~t~~ell~~~~~~~~~~~~~~ 300 (328)
T cd07856 280 ISAAEALAHPYLAPYHDPTDE 300 (328)
T ss_pred CCHHHHhcCCccccccCCccc
Confidence 999999999999887665554
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-27 Score=253.13 Aligned_cols=204 Identities=16% Similarity=0.180 Sum_probs=150.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-----------CCCCHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-----------RSVDVYECLHIFRQIVE 132 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-----------~~l~~~~~~~i~~QIl~ 132 (720)
.+|..++.+++||||+++++ ++.... ..+++||| .+++|.+++.... ..+++..++.++.||+.
T Consensus 65 ~~ei~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~ 140 (295)
T cd05097 65 LKEIKIMSRLKNPNIIRLLG-VCVSDD---PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIAS 140 (295)
T ss_pred HHHHHHHHhCCCCCcCeEEE-EEcCCC---ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHH
Confidence 35777999999999999999 554433 57999999 8999999994321 23688899999999999
Q ss_pred HHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccc
Q 004998 133 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 133 aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
||.|||++|++||||||+||+++.++.+||+|||++........ +
T Consensus 141 al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~---------------------------------~-- 185 (295)
T cd05097 141 GMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDY---------------------------------Y-- 185 (295)
T ss_pred HHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcc---------------------------------e--
Confidence 99999999999999999999999999999999988733210000 0
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccc
Q 004998 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 292 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~s 292 (720)
. ......++..|+|||++.+..++.++
T Consensus 186 -~----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~ 212 (295)
T cd05097 186 -R----------------------------------------------------IQGRAVLPIRWMAWESILLGKFTTAS 212 (295)
T ss_pred -e----------------------------------------------------ccCcCcCceeecChhhhccCCcCchh
Confidence 0 00012456789999999888899999
Q ss_pred cchhhhhhhhhccc-----cCCCCchHHHHHHH---hh---cCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 293 DIYRLGVLLFELFC-----PFSTGEEKTRTMSS---LR---HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 293 DIwSLGvll~eLlt-----pf~~~~~~~~~~~~---l~---~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||||++|+|++ ||............ .. ............+...+|+.+||..+|.+||++.+|++
T Consensus 213 DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~ 291 (295)
T cd05097 213 DVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH 291 (295)
T ss_pred hHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 99999999999987 55543322111111 11 11111111122345569999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=249.70 Aligned_cols=202 Identities=15% Similarity=0.193 Sum_probs=147.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----RSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~----~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+|..++..++||||+++++ .+... ..+|++||| .+++|.++|.... ...++..++.++.||+.||.|||++
T Consensus 44 ~e~~~~~~l~h~nii~~~~-~~~~~---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 119 (269)
T cd05042 44 QEVQPYRELNHPNVLQCLG-QCIES---IPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA 119 (269)
T ss_pred HHHHHHHhCCCCCcceEEE-EECCC---CceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc
Confidence 5677888999999999999 44433 257999999 8999999995432 2246788899999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+|++|||.+........ +
T Consensus 120 ~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~---------------------------------~---------- 156 (269)
T cd05042 120 DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY---------------------------------Y---------- 156 (269)
T ss_pred CEecccccHhheEecCCCcEEEeccccccccccchh---------------------------------e----------
Confidence 999999999999999999999999988732111000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-------CCCCcccc
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-------APVSCASD 293 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-------~~~s~~sD 293 (720)
.......+++.|+|||++.. ..++.++|
T Consensus 157 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~D 191 (269)
T cd05042 157 ---------------------------------------------ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSN 191 (269)
T ss_pred ---------------------------------------------eccCCCCCcccccCHHHHhhccccccccccchhhH
Confidence 00000245678999999743 34688999
Q ss_pred chhhhhhhhhccc----cCCCCchHHHHHHHhhcCC---CCccccccCchH-HHHHHHcCCCCCCCCCChHHHHc
Q 004998 294 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRV---LPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 294 IwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~---~p~~~~~~~p~~-~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||||++|||++ ||............+.... ..+.....++.. .+++..|+ .||++|||+++|++
T Consensus 192 iwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 192 IWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred HHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 9999999999998 4655444333333333221 223333344444 37888888 59999999999975
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=248.39 Aligned_cols=204 Identities=15% Similarity=0.137 Sum_probs=152.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC------CCCCCCHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK------PKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~------~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
..+|..+|+.++||||+++++ ++.... ..+++||| .+++|.+++.. ....+++..++.++.||+.||.|
T Consensus 46 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 121 (269)
T cd05044 46 FLKEAHLMSNFNHPNIVKLLG-VCLLNE---PQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVY 121 (269)
T ss_pred HHHHHHHHHhcCCCCeeeEee-eecCCC---CeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHH
Confidence 336778999999999999999 444433 57999999 89999999943 22347889999999999999999
Q ss_pred HHHcCceeccCCCCcEEEccCC-----ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccc
Q 004998 137 AHSQGIVVHNVRPSCFVMSSFN-----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~-----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
||+.+++|+||||+||+++.++ .++++|||++........ +
T Consensus 122 lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~---------------------------------~- 167 (269)
T cd05044 122 LEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDY---------------------------------Y- 167 (269)
T ss_pred HHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccc---------------------------------c-
Confidence 9999999999999999999877 899988887743211000 0
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcc
Q 004998 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~ 291 (720)
.......++..|+|||.+.+..++.+
T Consensus 168 ------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~ 193 (269)
T cd05044 168 ------------------------------------------------------RKEGEGLLPVRWMAPESLLDGKFTTQ 193 (269)
T ss_pred ------------------------------------------------------ccCcccCCCccccCHHHHccCCcccc
Confidence 00000234678999999998889999
Q ss_pred ccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 292 SDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 292 sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||||||++|||++ ||...... .....+.....+.......+...+|+.+||.++|.+||++.++++
T Consensus 194 ~Dv~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 194 SDVWSFGVLMWEILTLGQQPYPALNNQ-EVLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred hhHHHHHHHHHHHHHcCCCCCcccCHH-HHHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 999999999999997 55543332 333333332222211122234459999999999999999999875
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-27 Score=246.83 Aligned_cols=204 Identities=20% Similarity=0.247 Sum_probs=159.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+...|..++.+++||||+++++ .++.+. ..|++||| .+++|.+++.... .+++..+..++.||+.||.|||+.|
T Consensus 39 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~~ 113 (250)
T cd05123 39 HTLTERNILSRINHPFIVKLHY-AFQTEE---KLYLVLEYAPGGELFSHLSKEG-RFSEERARFYAAEIVLALEYLHSLG 113 (250)
T ss_pred HHHHHHHHHHHcCCCcHHHHHH-HeecCC---eeEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3446667899999999999999 444443 67999999 6999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++|+||+|+||+++.++.++|+|||.+....... +
T Consensus 114 ~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---------------------------------~------------ 148 (250)
T cd05123 114 IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG---------------------------------S------------ 148 (250)
T ss_pred ceecCCCcceEEEcCCCcEEEeecCcceecccCC---------------------------------C------------
Confidence 9999999999999999999999998874321110 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+.+...+.++|+||||+++
T Consensus 149 ---------------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~ 183 (250)
T cd05123 149 ---------------------------------------------RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLL 183 (250)
T ss_pred ---------------------------------------------cccCCcCCccccChHHhCCCCCCchhhHHHHHHHH
Confidence 00113568889999999888889999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCCh---HHHHcCccc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKM---GELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rpta---~eiL~hp~~ 364 (720)
|+|++ ||...... .....+.... ..+... .....+|+.+||..||+.||++ .++++||||
T Consensus 184 ~~l~~g~~p~~~~~~~-~~~~~~~~~~--~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 184 YEMLTGKPPFYAEDRK-EIYEKILKDP--LRFPEFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred HHHHHCCCCCCCCCHH-HHHHHHhcCC--CCCCCCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 99999 66544432 2333333221 112222 2344599999999999999999 999999998
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=246.84 Aligned_cols=199 Identities=15% Similarity=0.151 Sum_probs=153.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..++..++||||+++++ ++.+. ...+++||| .+++|.+++.... ..+++..+..++.||+.||.|||++
T Consensus 46 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~ 121 (256)
T cd05039 46 AFLAEASVMTTLRHPNLVQLLG-VVLQG---NPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK 121 (256)
T ss_pred HHHHHHHHHHhcCCcceeeeEE-EEcCC---CCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3446778999999999999999 44443 357999999 8899999995433 3589999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+|+||||+||+++.++.++|+|||.+.......
T Consensus 122 ~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~--------------------------------------------- 156 (256)
T cd05039 122 NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ--------------------------------------------- 156 (256)
T ss_pred CccchhcccceEEEeCCCCEEEccccccccccccc---------------------------------------------
Confidence 99999999999999999999999988773321000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
....++..|+|||.+.+..++.++|||||||+
T Consensus 157 ------------------------------------------------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~i 188 (256)
T cd05039 157 ------------------------------------------------DSGKLPVKWTAPEALREKKFSTKSDVWSFGIL 188 (256)
T ss_pred ------------------------------------------------ccCCCcccccCchhhcCCcCCcHHHHHHHHHH
Confidence 00123557999999988889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||..... ......+.....+ ...... +...+|+.+||..+|++||++.+++.
T Consensus 189 l~~l~~~g~~p~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 189 LWEIYSFGRVPYPRIPL-KDVVPHVEKGYRM-EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred HHHHHhcCCCCCCCCCH-HHHHHHHhcCCCC-CCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 999986 5544432 2333333333222 222233 44559999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-28 Score=253.76 Aligned_cols=202 Identities=23% Similarity=0.278 Sum_probs=149.8
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|...+.+++||||+++++ ++.... .+++|||| .+++|.++|... ...+++..+..|+.||+.||.|||+++|+
T Consensus 50 ~e~~~l~~l~h~ni~~~~g-~~~~~~---~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~ii 125 (259)
T PF07714_consen 50 NEIQILRKLRHPNIVKLYG-FCIENE---PLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNII 125 (259)
T ss_dssp HHHHHHHTHSBTTBE-EEE-EEESSS---SEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred ecccccccccccccccccc-cccccc---ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 6777899999999999999 444332 48999999 889999999655 55699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||+|+||+++.++.+||+|||.+.........
T Consensus 126 H~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~---------------------------------------------- 159 (259)
T PF07714_consen 126 HGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY---------------------------------------------- 159 (259)
T ss_dssp EST-SGGGEEEETTTEEEEESTTTGEETTTSSSE----------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccc----------------------------------------------
Confidence 9999999999999999999998877432110000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
. ......+...|+|||.+.+..++.++||||||+++||
T Consensus 160 ----------------------~--------------------~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~e 197 (259)
T PF07714_consen 160 ----------------------K--------------------NDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYE 197 (259)
T ss_dssp ----------------------E--------------------ESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHH
T ss_pred ----------------------c--------------------ccccccccccccccccccccccccccccccccccccc
Confidence 0 0001234678999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+.....++..........+++..||+.+|.+||++.+|++
T Consensus 198 i~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 198 ILTLGKFPFSDYDNE-EIIEKLKQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHTTSSGTTTTSCHH-HHHHHHHTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ccccccccccccccc-cccccccccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 999 56555333 444455444333322223344559999999999999999999985
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.7e-27 Score=245.47 Aligned_cols=206 Identities=18% Similarity=0.237 Sum_probs=160.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ ++... ..++++||| .+++|.+++... ..+++..+..++.||+.||.|||+.|
T Consensus 45 ~~~~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~ 119 (254)
T cd06627 45 SIMQEIDLLKNLKHPNIVKYIG-SIETS---DSLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQG 119 (254)
T ss_pred HHHHHHHHHHhCCCCCccEEEE-EEEeC---CEEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 3347777899999999999999 44443 267999999 889999999554 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+.........
T Consensus 120 i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-------------------------------------------- 155 (254)
T cd06627 120 VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD-------------------------------------------- 155 (254)
T ss_pred cccCCCCHHHEEECCCCCEEEeccccceecCCCccc--------------------------------------------
Confidence 999999999999999999999999887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....++..|+|||.+.+..++.++||||||+++
T Consensus 156 ----------------------------------------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l 189 (254)
T cd06627 156 ----------------------------------------------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTV 189 (254)
T ss_pred ----------------------------------------------ccccccchhhcCHhhhcCCCCCcchhHHHHHHHH
Confidence 0013568899999999888789999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|+|++ ||........ +..+.....++......+...+|+.+||..+|++|||+.+++.||||
T Consensus 190 ~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 190 IELLTGNPPYYDLNPMAA-LFRIVQDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHHhCCCCCCCccHHHH-HHHHhccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 99999 5554443322 22222333332222223345599999999999999999999999997
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-27 Score=254.79 Aligned_cols=202 Identities=16% Similarity=0.132 Sum_probs=154.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..++..++||||+++++ ++... ..++++|| .+++|.+++......+++..+..++.||+.||.|||++||+
T Consensus 57 ~~e~~~~~~l~h~niv~~~~-~~~~~----~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iv 131 (303)
T cd05110 57 MDEALIMASMDHPHLVRLLG-VCLSP----TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLV 131 (303)
T ss_pred HHHHHHHHhCCCCCcccEEE-EEcCC----CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCee
Confidence 36777899999999999999 54433 24788999 88999999966555689999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.+||+|||.+......... +
T Consensus 132 H~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~--------------------------------~------------- 166 (303)
T cd05110 132 HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKE--------------------------------Y------------- 166 (303)
T ss_pred ccccccceeeecCCCceEEccccccccccCcccc--------------------------------c-------------
Confidence 9999999999999999999998887432110000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||.+.+..++.++|||||||++||
T Consensus 167 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~e 203 (303)
T cd05110 167 -------------------------------------------NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWE 203 (303)
T ss_pred -------------------------------------------ccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHH
Confidence 0000235678999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+..+..++.......+..+++..||..+|++||++.++++
T Consensus 204 l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~ 263 (303)
T cd05110 204 LMTFGGKPYDGIPTR-EIPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAA 263 (303)
T ss_pred HHhCCCCCCCCCCHH-HHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 986 56543222 222333333333322233455669999999999999999999876
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.8e-28 Score=282.22 Aligned_cols=249 Identities=14% Similarity=0.191 Sum_probs=184.4
Q ss_pred CcccccccccCCcccccccccCCCCCCcc----------ccccccccCCCCccceeeeehhhhcccCCCCCceeccccee
Q 004998 18 SSDSAWQDSDSSRALNISGVSDRNPRLLR----------GERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVC 87 (720)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~ 87 (720)
+..-.|.+..-.+.+|.+.|+...-+... +.-..+....+.......-+|+.+++.++|||||+++|+.+
T Consensus 686 lp~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l 765 (1025)
T KOG1095|consen 686 LPEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCL 765 (1025)
T ss_pred cccCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeec
Confidence 34455677777888888888763222211 00001111111122223338899999999999999999555
Q ss_pred ecCCCCCcEEEEEec-CCCCHHHHHhCC------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCce
Q 004998 88 ENEAAIDPFVHAIEW-GDVSLRQWLDKP------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHV 160 (720)
Q Consensus 88 ~~~~~~~~~~lv~E~-~ggsL~~~L~~~------~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~v 160 (720)
. .. ..+|++|| .||+|..||++. ...++..+.+.++.||+.|+.||+++++|||||-..|+||+....|
T Consensus 766 ~-~~---~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~V 841 (1025)
T KOG1095|consen 766 D-SG---PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVV 841 (1025)
T ss_pred C-CC---CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcE
Confidence 4 32 57999999 999999999776 6668999999999999999999999999999999999999999999
Q ss_pred EEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcccccccccc
Q 004998 161 SFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVE 240 (720)
Q Consensus 161 kliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~ 240 (720)
||.|||+|+|.-.. |+
T Consensus 842 KIaDFGlArDiy~~----------------------------------~y------------------------------ 857 (1025)
T KOG1095|consen 842 KIADFGLARDIYDK----------------------------------DY------------------------------ 857 (1025)
T ss_pred EEcccchhHhhhhc----------------------------------hh------------------------------
Confidence 99999998743111 00
Q ss_pred ccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc----cCCCCchHHH
Q 004998 241 GMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTR 316 (720)
Q Consensus 241 ~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~ 316 (720)
+...+ .. +-...|||||.+....++.++|||||||+|||+++ ||........
T Consensus 858 ------yr~~~---------~a---------~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v 913 (1025)
T KOG1095|consen 858 ------YRKHG---------EA---------MLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV 913 (1025)
T ss_pred ------eeccC---------cc---------ccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH
Confidence 00000 00 11346999999999889999999999999999999 8888777755
Q ss_pred HHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHc
Q 004998 317 TMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 317 ~~~~l~~~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+...+..+.+++. ..+|+.. ++|..||+.+|++||++..|++
T Consensus 914 ~~~~~~ggRL~~P--~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 914 LLDVLEGGRLDPP--SYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred HHHHHhCCccCCC--CCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 5445555544432 3555554 9999999999999999999987
|
|
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=247.81 Aligned_cols=202 Identities=17% Similarity=0.219 Sum_probs=146.8
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+|..+++.++||||+++++ .+.+.. ..|++||| .+++|.+++.+. ...+++..++.++.||+.||.|||+.+
T Consensus 44 ~e~~~~~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~ 119 (268)
T cd05086 44 QQGDPYRILQHPNILQCLG-QCVEAI---PYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN 119 (268)
T ss_pred HHHHHHhccCCcchhheEE-EecCCC---ccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC
Confidence 5666788899999999999 554443 57999999 889999999542 234677788999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||.+...... ++
T Consensus 120 i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~----------------------------------~~----------- 154 (268)
T cd05086 120 FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKE----------------------------------DY----------- 154 (268)
T ss_pred eeccCCccceEEEcCCccEEecccccccccCcc----------------------------------hh-----------
Confidence 999999999999999999999988876221000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-------CCCCccccc
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-------APVSCASDI 294 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-------~~~s~~sDI 294 (720)
........|+..|+|||++.. ..++.++||
T Consensus 155 -------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Di 191 (268)
T cd05086 155 -------------------------------------------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNV 191 (268)
T ss_pred -------------------------------------------hhcccCCcCcccccCchhcccccCccccCCCCCcchh
Confidence 000001357889999999853 235789999
Q ss_pred hhhhhhhhhccc----cCCCCchHHHHHHHhhcC---CCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHR---VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~---~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||++|||++ ||............+... .+.+.+...+ +...+++..|| .+|.+||++.++++
T Consensus 192 wslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~ 264 (268)
T cd05086 192 WALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR 264 (268)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence 999999999986 565544432222222221 1223333333 34458999999 67999999999975
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-27 Score=257.19 Aligned_cols=203 Identities=17% Similarity=0.177 Sum_probs=153.2
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHHHH
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIF 127 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~i~ 127 (720)
.+|..++.++ +||||+++++ ++.... .+|++||| .+++|.++|.+. ...++...++.++
T Consensus 65 ~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 140 (334)
T cd05100 65 VSEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCA 140 (334)
T ss_pred HHHHHHHHhhcCCCCeeeeeE-EEccCC---ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHH
Confidence 3677788888 8999999999 444432 57999999 899999999532 2247888999999
Q ss_pred HHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccc
Q 004998 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||.|||++||+||||||+|||++.++.++|+|||.++.......
T Consensus 141 ~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~------------------------------- 189 (334)
T cd05100 141 YQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDY------------------------------- 189 (334)
T ss_pred HHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccccc-------------------------------
Confidence 9999999999999999999999999999999999999988743211100
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC
Q 004998 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
+. ......++..|+|||++.+..
T Consensus 190 --~~-------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~ 212 (334)
T cd05100 190 --YK-------------------------------------------------------KTTNGRLPVKWMAPEALFDRV 212 (334)
T ss_pred --cc-------------------------------------------------------cccCCCcCceEcCHHHhccCC
Confidence 00 000013456799999999888
Q ss_pred CCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++.++|||||||++|||++ ||.... .......+.....++..........+|+.+||+.+|.+||++.|+++
T Consensus 213 ~~~~~Di~slG~il~el~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~ 288 (334)
T cd05100 213 YTHQSDVWSFGVLLWEIFTLGGSPYPGIP-VEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVE 288 (334)
T ss_pred cCchhhhHHHHHHHHHHHhcCCCCCCCCC-HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence 9999999999999999987 454433 23344444433333332233345569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.7e-28 Score=251.59 Aligned_cols=221 Identities=19% Similarity=0.244 Sum_probs=159.7
Q ss_pred ehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++.++. ||||+++++ ++.... .++++||| .+++|.+++.+.+ .+++..++.++.||+.||.|||+.|++
T Consensus 50 ~e~~~~~~l~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~~~~ 124 (280)
T cd05581 50 IEKEVLTRLNGHPGIIKLYY-TFQDEE---NLYFVLEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSKGII 124 (280)
T ss_pred HHHHHHHhcccCCCchhHHH-HhcCCc---eEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 5566788888 999999999 444433 57999999 7999999996554 599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||+|+||+++.++.++++|||.+...+........... . ..++..
T Consensus 125 H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~--------------~--------~~~~~~----------- 171 (280)
T cd05581 125 HRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGD--------------A--------TNIDSQ----------- 171 (280)
T ss_pred ecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCC--------------C--------cccccc-----------
Confidence 9999999999999999999999988654332111000000 0 000000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
............|+..|+|||.+.+..++.++|||||||++|+
T Consensus 172 -------------------------------------~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~ 214 (280)
T cd05581 172 -------------------------------------IEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQ 214 (280)
T ss_pred -------------------------------------ccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHH
Confidence 0000001112467899999999988889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCCh----HHHHcCccc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKM----GELLQSEFL 364 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta----~eiL~hp~~ 364 (720)
|++ ||....... ....+.... ..++..+ +...+|+.+||+.+|.+||++ .++++||||
T Consensus 215 l~~g~~p~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 215 MLTGKPPFRGSNEYL-TFQKILKLE--YSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred HHhCCCCCCCccHHH-HHHHHHhcC--CCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 999 554443322 222222111 1111223 445599999999999999999 999999997
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=250.06 Aligned_cols=204 Identities=19% Similarity=0.202 Sum_probs=153.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-------CCCCHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-------RSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-------~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..++..++||||+++++.++... ...++++|| .+++|.+++.... ..+++..++.++.||+.||.
T Consensus 55 ~~~e~~~l~~l~h~ni~~~~~~~~~~~---~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~ 131 (280)
T cd05043 55 LLQESCLLYGLSHQNILPILHVCIEDG---EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMS 131 (280)
T ss_pred HHHHHHHHHhCCCCCCCeEEEEEecCC---CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHH
Confidence 346777899999999999999433332 256899999 8899999994421 45899999999999999999
Q ss_pred HHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||++|++||||||+||+++.++.+|++|||+++..... ++..
T Consensus 132 ~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~----------------------------------~~~~--- 174 (280)
T cd05043 132 YLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPM----------------------------------DYHC--- 174 (280)
T ss_pred HHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCC----------------------------------ceEE---
Confidence 999999999999999999999999999998887432111 0000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccch
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
. .....++..|+|||++.+..++.++|||
T Consensus 175 -------------------------------~--------------------~~~~~~~~~y~apE~~~~~~~~~~~Di~ 203 (280)
T cd05043 175 -------------------------------L--------------------GDNENRPVKWMALESLVNKEYSSASDVW 203 (280)
T ss_pred -------------------------------e--------------------CCCCCcchhccCHHHHhcCCCCchhhHH
Confidence 0 0001346679999999888899999999
Q ss_pred hhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 296 RLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 296 SLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++|||++ ||...... .....+.....++. ....| ...+++.+||.++|++|||+.++++
T Consensus 204 slG~~l~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~ 271 (280)
T cd05043 204 SFGVLLWELMTLGQTPYVEIDPF-EMAAYLKDGYRLAQ-PINCPDELFAVMACCWALDPEERPSFSQLVQ 271 (280)
T ss_pred HhHHHHHHHhcCCCCCcCcCCHH-HHHHHHHcCCCCCC-CCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99999999997 56544332 33333333322222 22334 4559999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-27 Score=246.47 Aligned_cols=200 Identities=15% Similarity=0.180 Sum_probs=153.3
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++.+++||||+++++ ++... .++++||| .+++|.+++.. .+..+++.+++.++.||+.||.|||+.|+
T Consensus 49 ~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i 123 (260)
T cd05067 49 LAEANLMKQLQHPRLVRLYA-VVTQE----PIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNY 123 (260)
T ss_pred HHHHHHHHhcCCcCeeeEEE-EEccC----CcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCe
Confidence 46778999999999999998 44332 47999999 89999999843 34468999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++++|||.+.........
T Consensus 124 ~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~--------------------------------------------- 158 (260)
T cd05067 124 IHRDLRAANILVSETLCCKIADFGLARLIEDNEYT--------------------------------------------- 158 (260)
T ss_pred ecccccHHhEEEcCCCCEEEccCcceeecCCCCcc---------------------------------------------
Confidence 99999999999999999999998877332110000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+..++.++|||||||++|
T Consensus 159 --------------------------------------------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~ 194 (260)
T cd05067 159 --------------------------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 194 (260)
T ss_pred --------------------------------------------cccCCcccccccCHHHhccCCcCcccchHHHHHHHH
Confidence 000023467899999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+.....++. ....| ...+|+.+||..+|++||++++++.
T Consensus 195 el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 195 EIVTYGRIPYPGMTNP-EVIQNLERGYRMPR-PDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred HHHhCCCCCCCCCChH-HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 9997 56544332 33333333322222 22333 4569999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.6e-27 Score=247.54 Aligned_cols=204 Identities=15% Similarity=0.194 Sum_probs=147.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP----KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~----~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
..+|..++.+++||||+++++ .+.... .+++|||| .+++|.++|... ...+++..++.++.||+.||.|||
T Consensus 42 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 117 (269)
T cd05087 42 FLEEAQPYRSLQHSNLLQCLG-QCTEVT---PYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH 117 (269)
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEcCCC---CcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH
Confidence 346778999999999999999 444432 57999999 889999999432 123567788899999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+.|++||||||+||+++.++.++|+|||.+...... ++
T Consensus 118 ~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~----------------------------------~~-------- 155 (269)
T cd05087 118 KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKE----------------------------------DY-------- 155 (269)
T ss_pred HCCEeccccCcceEEEcCCCcEEECCccccccccCc----------------------------------ce--------
Confidence 999999999999999999999999998877321110 00
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-------CCCcc
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-------PVSCA 291 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-------~~s~~ 291 (720)
........|++.|+|||++.+. .++.+
T Consensus 156 ----------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~ 189 (269)
T cd05087 156 ----------------------------------------------YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKE 189 (269)
T ss_pred ----------------------------------------------eecCCCcCCcccccCHhHhccccccccccCCCcc
Confidence 0000113567889999998643 25789
Q ss_pred ccchhhhhhhhhccc----cCCCCchHHHHHHHhhc---CCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 292 SDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRH---RVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 292 sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~---~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||||||++|||++ ||............+.. ....+.+.... +...+++..|+ .+|++|||++||+.
T Consensus 190 ~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 190 SNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred chhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 999999999999986 66554433222222221 11122222222 33458999998 68999999999974
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.1e-28 Score=272.89 Aligned_cols=203 Identities=20% Similarity=0.250 Sum_probs=164.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------CC----CCCHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------KR----SVDVYECLHIFR 128 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------~~----~l~~~~~~~i~~ 128 (720)
.++||+.+|+.++|||||+|+|++.+.+ ++|+|+|| ..|||.+||+.. +. +++..+.++|+.
T Consensus 535 dF~REaeLla~l~H~nIVrLlGVC~~~~----P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~ 610 (774)
T KOG1026|consen 535 DFRREAELLAELQHPNIVRLLGVCREGD----PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIAT 610 (774)
T ss_pred HHHHHHHHHHhccCCCeEEEEEEEccCC----eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHH
Confidence 4448888999999999999999444444 68999999 999999999421 12 388999999999
Q ss_pred HHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccc
Q 004998 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
||+.|+.||-++.+|||||-..|+||.++-.|||.|||++++.=. +
T Consensus 611 QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYs----------------------------------s 656 (774)
T KOG1026|consen 611 QIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYS----------------------------------S 656 (774)
T ss_pred HHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhh----------------------------------h
Confidence 999999999999999999999999999999999999999976311 1
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC
Q 004998 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 288 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 288 (720)
|+ .+... . -+=...|||||.+..++|
T Consensus 657 DY----------------------------------Yk~~~-----------~---------t~lPIRWMppEsIly~kF 682 (774)
T KOG1026|consen 657 DY----------------------------------YKVRG-----------N---------TLLPIRWMPPESILYGKF 682 (774)
T ss_pred hh----------------------------------hcccC-----------C---------ceeeeecCCHHHhhcCcc
Confidence 11 00000 0 012457999999999999
Q ss_pred Cccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHH
Q 004998 289 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 289 s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL 359 (720)
+++|||||+||+|||+++ ||.+.... +.+..++.+.+-+. +..+|... +||..||+.+|++||++.||-
T Consensus 683 TteSDVWs~GVvLWEIFsyG~QPy~glSn~-EVIe~i~~g~lL~~-Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 683 TTESDVWSFGVVLWEIFSYGKQPYYGLSNQ-EVIECIRAGQLLSC-PENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred cchhhhhhhhhhhhhhhccccCcccccchH-HHHHHHHcCCcccC-CCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 999999999999999999 88776554 67778887776443 34555554 999999999999999999984
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=266.74 Aligned_cols=210 Identities=17% Similarity=0.225 Sum_probs=156.9
Q ss_pred eeehhhhccc-CCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCC---CHHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSV---DVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l---~~~~~~~i~~QIl~aL~yLHs 139 (720)
..||+..|.. =.|||||++|+ .+......||..|.+..+|.+++......+ .....+.++.|++.||++||+
T Consensus 549 A~rEi~lL~eSD~H~NviRyyc----~E~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs 624 (903)
T KOG1027|consen 549 AQREIQLLQESDEHPNVIRYYC----SEQDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS 624 (903)
T ss_pred HHHHHHHHHhccCCCceEEEEe----eccCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh
Confidence 3367767766 45999999999 334445789999999999999996631111 114568899999999999999
Q ss_pred cCceeccCCCCcEEEcc---C--CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 140 QGIVVHNVRPSCFVMSS---F--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~---~--~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
.+||||||||.||||+. + ..++|.|||+|+..+... ..|
T Consensus 625 l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~--------------------------------sS~---- 668 (903)
T KOG1027|consen 625 LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK--------------------------------SSF---- 668 (903)
T ss_pred cccccccCCCceEEEEccCCCcceeEEecccccccccCCCc--------------------------------chh----
Confidence 99999999999999985 2 357888888885532220 000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
. +.....||.+|+|||++....-+.++||
T Consensus 669 ------------------~---------------------------------r~s~~sGt~GW~APE~L~~~~~~~avDi 697 (903)
T KOG1027|consen 669 ------------------S---------------------------------RLSGGSGTSGWQAPEQLREDRKTQAVDI 697 (903)
T ss_pred ------------------h---------------------------------cccCCCCcccccCHHHHhccccCcccch
Confidence 0 0011468999999999999888889999
Q ss_pred hhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCc--hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP--KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p--~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||||++|+.++ ||...- ....+|..+...-......+ ...+||.+||+++|..||+|.++|.||||-..
T Consensus 698 FslGCvfyYvltgG~HpFGd~~---~R~~NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~ 773 (903)
T KOG1027|consen 698 FSLGCVFYYVLTGGSHPFGDSL---ERQANILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS 773 (903)
T ss_pred hhcCceEEEEecCCccCCCchH---HhhhhhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence 999999999999 665533 33334444443333233333 55699999999999999999999999999886
|
|
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-27 Score=250.86 Aligned_cols=203 Identities=16% Similarity=0.159 Sum_probs=149.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC----------CCCCHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----------RSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~----------~~l~~~~~~~i~~QIl~a 133 (720)
.+|..+|..++||||+++++ ++.... .++++||| .+++|.+++.... ..+++..+..++.||+.|
T Consensus 67 ~~E~~~l~~l~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a 142 (296)
T cd05095 67 LKEIKIMSRLKDPNIIRLLA-VCITSD---PLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASG 142 (296)
T ss_pred HHHHHHHHhCCCCCcceEEE-EEecCC---ccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHH
Confidence 36777899999999999999 454443 47999999 8899999995422 236778999999999999
Q ss_pred HHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccc
Q 004998 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|+|||+.||+||||||+|||++.++.++|+|||.+....... .+
T Consensus 143 l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~---------------------------------~~--- 186 (296)
T cd05095 143 MKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGD---------------------------------YY--- 186 (296)
T ss_pred HHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCc---------------------------------ce---
Confidence 999999999999999999999999999999988874321100 00
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcccc
Q 004998 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.......+++.|+|||...+..++.++|
T Consensus 187 ----------------------------------------------------~~~~~~~~~~~~~~pe~~~~~~~~~~~D 214 (296)
T cd05095 187 ----------------------------------------------------RIQGRAVLPIRWMSWESILLGKFTTASD 214 (296)
T ss_pred ----------------------------------------------------eccCcCcCccccCCHHHHhcCCccchhh
Confidence 0000023467899999988888999999
Q ss_pred chhhhhhhhhccc-----cCCCCchHHHHHHHh-------hcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 294 IYRLGVLLFELFC-----PFSTGEEKTRTMSSL-------RHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 294 IwSLGvll~eLlt-----pf~~~~~~~~~~~~l-------~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||||++|||++ ||....... ..... ......+......+...+|+.+||+.||.+||++.+|++
T Consensus 215 iwSlG~~l~el~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 215 VWAFGVTLWEILTLCKEQPYSQLSDEQ-VIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred hhHHHHHHHHHHHhCCCCCccccChHH-HHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999996 554332221 11111 111111221222244559999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=4e-27 Score=247.50 Aligned_cols=204 Identities=14% Similarity=0.101 Sum_probs=156.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.. ...+++||| .+++|.+++......+++..+..++.||+.||+|||++|
T Consensus 55 ~~~~e~~~l~~l~h~~i~~~~~-~~~~----~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 129 (279)
T cd05057 55 EILDEAYVMASVDHPHVVRLLG-ICLS----SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKR 129 (279)
T ss_pred HHHHHHHHHHhCCCCCcceEEE-EEec----CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 5544 257999999 899999999765556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.++....... -+
T Consensus 130 i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~--------------------------------~~----------- 166 (279)
T cd05057 130 LVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK--------------------------------EY----------- 166 (279)
T ss_pred EEecccCcceEEEcCCCeEEECCCcccccccCccc--------------------------------ce-----------
Confidence 99999999999999999999999988743211100 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......++..|+|||.+....++.++|||||||++
T Consensus 167 ---------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l 201 (279)
T cd05057 167 ---------------------------------------------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTV 201 (279)
T ss_pred ---------------------------------------------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHHH
Confidence 00001235679999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+...+..........+++.+||..+|..||++.++++
T Consensus 202 ~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 202 WELMTFGAKPYEGIPAV-EIPDLLEKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred HHHhcCCCCCCCCCCHH-HHHHHHhCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99997 55444332 333344443333332333455669999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=248.22 Aligned_cols=203 Identities=18% Similarity=0.218 Sum_probs=154.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--------CCCCHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------RSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------~~l~~~~~~~i~~QIl~aL 134 (720)
..+|..+|.+++||||+++++ ++.+.. ..|+|||| .+++|.+++.... ..+++..++.++.||+.||
T Consensus 55 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l 130 (275)
T cd05046 55 FRRELDMFRKLSHKNVVRLLG-LCREAE---PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGM 130 (275)
T ss_pred HHHHHHHHHhcCCcceeeeEE-EECCCC---cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHH
Confidence 346778999999999999999 554433 56999999 8899999995432 1589999999999999999
Q ss_pred HHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
.|||+.||+||||||+||+++.++.++++|||.+....... +
T Consensus 131 ~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~----------------------------------~---- 172 (275)
T cd05046 131 DHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSE----------------------------------Y---- 172 (275)
T ss_pred HHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCccc----------------------------------c----
Confidence 99999999999999999999999999998888763211000 0
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
. ......++..|+|||.+.+..++.++||
T Consensus 173 ----------~-----------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di 201 (275)
T cd05046 173 ----------Y-----------------------------------------KLRNALIPLRWLAPEAVQEDDFSTKSDV 201 (275)
T ss_pred ----------c-----------------------------------------ccCCceeEEeecChhhhccCCCCchhhH
Confidence 0 0001245677999999988888999999
Q ss_pred hhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||++|+|++ ||...... .....+.....+.......|. ..+++.+||..+|.+||++.|++.
T Consensus 202 ~slG~~l~~l~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~ 271 (275)
T cd05046 202 WSFGVLMWEVFTQGELPFYGLSDE-EVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVS 271 (275)
T ss_pred HHHHHHHHHHHhCCCCCccccchH-HHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 999999999997 56543332 333344433332222233444 459999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-27 Score=244.04 Aligned_cols=201 Identities=20% Similarity=0.272 Sum_probs=155.2
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCC-CCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRS-VDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~-l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..++.+++||||+++++ ++... ..++++||| .+++|.+++...... +++..++.++.||+.||.|||+.|++
T Consensus 50 ~e~~~l~~l~~~~i~~~~~-~~~~~---~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~ 125 (258)
T smart00219 50 REARIMRKLDHPNIVKLLG-VCTEE---EPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFI 125 (258)
T ss_pred HHHHHHHhcCCCchheEEE-EEcCC---CeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCee
Confidence 5667888999999999999 44443 257999999 899999999554333 89999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+........ +
T Consensus 126 h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~---------------------------------~------------- 159 (258)
T smart00219 126 HRDLAARNCLVGENLVVKISDFGLSRDLYDDDY---------------------------------Y------------- 159 (258)
T ss_pred ecccccceEEEccCCeEEEcccCCceecccccc---------------------------------c-------------
Confidence 999999999999999999999988743211100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......+++.|+|||.+.+..++.++|||||||++|+
T Consensus 160 -------------------------------------------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~ 196 (258)
T smart00219 160 -------------------------------------------KKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWE 196 (258)
T ss_pred -------------------------------------------ccccCCCcccccChHHhccCCCCcchhHHHHHHHHHH
Confidence 0000125788999999987779999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||... ........+.....++......+...+++.+||..+|++|||+.++++
T Consensus 197 l~~~g~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 197 IFTLGESPYPGM-SNEEVLEYLKKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred HHhCCCCCCCCC-CHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 997 44432 233444444444443333333344569999999999999999999986
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.7e-28 Score=250.66 Aligned_cols=219 Identities=21% Similarity=0.291 Sum_probs=172.7
Q ss_pred hhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 68 GVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 68 ~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
..+|+- -+-|.+++++. +|+.-+ .+|+|||| .||+|.-.|.+-++ +.+..+..|+..|+-||-|||++|||.|
T Consensus 400 KrvLAL~~kppFL~qlHS-cFQTmD---RLyFVMEyvnGGDLMyhiQQ~Gk-FKEp~AvFYAaEiaigLFFLh~kgIiYR 474 (683)
T KOG0696|consen 400 KRVLALPGKPPFLVQLHS-CFQTMD---RLYFVMEYVNGGDLMYHIQQVGK-FKEPVAVFYAAEIAIGLFFLHSKGIIYR 474 (683)
T ss_pred hhheecCCCCchHHHHHH-Hhhhhh---heeeEEEEecCchhhhHHHHhcc-cCCchhhhhhHHHHHHhhhhhcCCeeee
Confidence 334554 34677788887 665554 57999999 99999988866665 9999999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
|||.+||||+.+|++||+|||+|+.--.+ -
T Consensus 475 DLKLDNvmLd~eGHiKi~DFGmcKEni~~-------------------------------------~------------- 504 (683)
T KOG0696|consen 475 DLKLDNVMLDSEGHIKIADFGMCKENIFD-------------------------------------G------------- 504 (683)
T ss_pred eccccceEeccCCceEeeecccccccccC-------------------------------------C-------------
Confidence 99999999999999999999998432110 0
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhcc
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELF 305 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLl 305 (720)
.+....+|||.|+|||++...+|+.++|+||+||+|||||
T Consensus 505 ----------------------------------------~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEml 544 (683)
T KOG0696|consen 505 ----------------------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 544 (683)
T ss_pred ----------------------------------------cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHH
Confidence 0011268999999999999999999999999999999999
Q ss_pred c---cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCC-----hHHHHcCcccCCC-ccchHHHH
Q 004998 306 C---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPK-----MGELLQSEFLNEP-RDSMEERE 375 (720)
Q Consensus 306 t---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~-~~~l~e~~ 375 (720)
. ||.+.++.........+....| ...++++ ++|..+|.+.|.+|.. -.+|-.||||+.. ++.++.++
T Consensus 545 aGQpPFdGeDE~elF~aI~ehnvsyP---KslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~E~~e 621 (683)
T KOG0696|consen 545 AGQPPFDGEDEDELFQAIMEHNVSYP---KSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKLERRE 621 (683)
T ss_pred cCCCCCCCCCHHHHHHHHHHccCcCc---ccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHHhhcc
Confidence 9 8888877655444444444332 2335555 9999999999999963 4678899999977 66666666
Q ss_pred HHHHHhhhh
Q 004998 376 AAIELREQI 384 (720)
Q Consensus 376 ~~~~~~e~~ 384 (720)
.++++.+..
T Consensus 622 iqPPfkPk~ 630 (683)
T KOG0696|consen 622 IQPPFKPKI 630 (683)
T ss_pred CCCCCCCcc
Confidence 666666554
|
|
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-27 Score=245.08 Aligned_cols=202 Identities=14% Similarity=0.157 Sum_probs=154.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++++++||||+++++ ++.... ..+++||| .+++|.+++... +..+++..++.++.||+.||.|||++||
T Consensus 49 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i 124 (261)
T cd05034 49 LQEAQIMKKLRHDKLVQLYA-VCSEEE---PIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNY 124 (261)
T ss_pred HHHHHHHhhCCCCCEeeeee-eeecCC---ceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 36778999999999999999 444432 57999999 899999999543 3468999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++++|||.+...+.....
T Consensus 125 ~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~--------------------------------------------- 159 (261)
T cd05034 125 IHRDLAARNILVGENLVCKIADFGLARLIEDDEYT--------------------------------------------- 159 (261)
T ss_pred ccCCcchheEEEcCCCCEEECccccceeccchhhh---------------------------------------------
Confidence 99999999999999999999999877432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......++..|+|||.+.+..++.++|||||||++|
T Consensus 160 --------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~ 195 (261)
T cd05034 160 --------------------------------------------AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLT 195 (261)
T ss_pred --------------------------------------------hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHH
Confidence 000012356799999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+......+......+...+++.+||..+|.+||++.++++
T Consensus 196 ~l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 196 EIVTYGRVPYPGMTNR-EVLEQVERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 9997 56544333 333444333222222222334569999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-27 Score=247.90 Aligned_cols=205 Identities=20% Similarity=0.271 Sum_probs=154.8
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
.|..++..++||||+++++ ++... ..++++|||.+++|.+++.+....+++..++.++.||+.||.|||++||+||
T Consensus 47 ~e~~~l~~~~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~ 122 (282)
T cd07829 47 REISLLKELKHPNIVKLLD-VIHTE---RKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHR 122 (282)
T ss_pred HHHHHHHhcCCCCHHHHHh-hhhcC---CceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccC
Confidence 5777899999999999999 44443 3689999996679999996654569999999999999999999999999999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||+|+||+++.++.++|+|||.+........ .+
T Consensus 123 ~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--------------------------------~~--------------- 155 (282)
T cd07829 123 DLKPQNILINRDGVLKLADFGLARAFGIPLR--------------------------------TY--------------- 155 (282)
T ss_pred CCChheEEEcCCCCEEEecCCcccccCCCcc--------------------------------cc---------------
Confidence 9999999999999999999988743211100 00
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhhhc
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~eL 304 (720)
....++..|+|||.+.+. .++.++|||||||++|||
T Consensus 156 -------------------------------------------~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l 192 (282)
T cd07829 156 -------------------------------------------THEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEM 192 (282)
T ss_pred -------------------------------------------CccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHH
Confidence 012457789999999776 689999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhh-------------------cCCCCc--------cccccCchHHHHHHHcCCCCCCCCCC
Q 004998 305 FC---PFSTGEEKTRTMSSLR-------------------HRVLPP--------QLLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~-------------------~~~~p~--------~~~~~~p~~~~li~~~L~~dP~~Rpt 354 (720)
++ ||.............. ...++. .+....+...+|+.+||..+|++||+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~ 272 (282)
T cd07829 193 ITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRIS 272 (282)
T ss_pred HhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCC
Confidence 99 4544332211111110 000111 01112234569999999999999999
Q ss_pred hHHHHcCccc
Q 004998 355 MGELLQSEFL 364 (720)
Q Consensus 355 a~eiL~hp~~ 364 (720)
+.+++.||||
T Consensus 273 ~~~~l~~p~~ 282 (282)
T cd07829 273 AKEALKHPYF 282 (282)
T ss_pred HHHHhhCcCC
Confidence 9999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.5e-27 Score=250.47 Aligned_cols=209 Identities=17% Similarity=0.220 Sum_probs=157.1
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..|..+|.++ +||||+++++ +++.+. .+|++||| .+++|.+++.... .+++..+..++.||+.||.|||+.|+
T Consensus 52 ~~e~~~l~~l~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~~i 126 (290)
T cd05613 52 RTERQVLEHIRQSPFLVTLHY-AFQTDT---KLHLILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIVLALEHLHKLGI 126 (290)
T ss_pred HHHHHHHHhcccCCChhceee-EeecCC---eEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3677788888 5999999998 555443 67999999 8999999995543 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.++|+|||++.........
T Consensus 127 ~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------------------- 161 (290)
T cd05613 127 IYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVE--------------------------------------------- 161 (290)
T ss_pred eccCCCHHHeEECCCCCEEEeeCccceeccccccc---------------------------------------------
Confidence 99999999999999999999999887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC--CCCccccchhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVL 300 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~sDIwSLGvl 300 (720)
......|+..|+|||.+.+. .++.++|||||||+
T Consensus 162 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~ 197 (290)
T cd05613 162 --------------------------------------------RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVL 197 (290)
T ss_pred --------------------------------------------ccccccCCcccCChhhccCCCCCCCccccHHHHHHH
Confidence 00013578899999998754 37889999999999
Q ss_pred hhhccc---cCCCCc---hHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCCc
Q 004998 301 LFELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEPR 368 (720)
Q Consensus 301 l~eLlt---pf~~~~---~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~~ 368 (720)
+|+|++ ||.... ........+.... ++......+...+|+.+||..||++|| ++.+++.||||....
T Consensus 198 l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 198 MYELLTGASPFTVDGEKNSQAEISRRILKSE-PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred HHHHhcCCCCCCcCCccccHHHHHHHhhccC-CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 999999 453211 1112222222221 221122234456999999999999997 899999999998863
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.1e-27 Score=243.04 Aligned_cols=200 Identities=13% Similarity=0.141 Sum_probs=152.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..+++.++|+||+++++ ++.. ..++++||| .+++|.+++.+ ....++...++.++.||+.||.|||+.|++
T Consensus 50 ~e~~~l~~l~~~~i~~~~~-~~~~----~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~ 124 (260)
T cd05073 50 AEANVMKTLQHDKLVKLHA-VVTK----EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYI 124 (260)
T ss_pred HHHHHHHhcCCCCcceEEE-EEcC----CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 5677899999999999999 4433 257999999 78999999954 344578899999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++..+.++|+|||.+.........
T Consensus 125 H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~---------------------------------------------- 158 (260)
T cd05073 125 HRDLRAANILVSASLVCKIADFGLARVIEDNEYT---------------------------------------------- 158 (260)
T ss_pred ccccCcceEEEcCCCcEEECCCcceeeccCCCcc----------------------------------------------
Confidence 9999999999999999999988877332110000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||++.+..++.++|||||||++|+
T Consensus 159 -------------------------------------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~ 195 (260)
T cd05073 159 -------------------------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLME 195 (260)
T ss_pred -------------------------------------------cccCCcccccccCHhHhccCCcCccccchHHHHHHHH
Confidence 0000234667999999988889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+......+..........+++.+||+++|++||++.+++.
T Consensus 196 l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 196 IVTYGRIPYPGMSNP-EVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred HHhcCCCCCCCCCHH-HHHHHHhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 997 56544332 333334433322222223334559999999999999999998864
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-28 Score=241.70 Aligned_cols=228 Identities=17% Similarity=0.183 Sum_probs=170.8
Q ss_pred CccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh----CCCCCCC
Q 004998 44 LLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD----KPKRSVD 119 (720)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~----~~~~~l~ 119 (720)
.-+++||...-......+++.+-|. +++.-+.||||++||+.|..++ +|+.||++..+|..+.+ .....++
T Consensus 91 ~mAVKrIr~~n~~keq~rll~e~d~-~mks~~cp~IVkfyGa~F~EGd----cWiCMELMd~SlDklYk~vy~vq~~~ip 165 (361)
T KOG1006|consen 91 LMAVKRIRSNNIEKEQKRLLMEHDT-VMKSSNCPNIVKFYGALFSEGD----CWICMELMDISLDKLYKRVYSVQKSRIP 165 (361)
T ss_pred EEEEEEeeeccchHHHHHHHHHHHH-HHhhcCCcHHHHHhhhhhcCCc----eeeeHHHHhhhHHHHHHHHHHHHhccCc
Confidence 3456666666654455566666554 4455689999999998776664 78999999889877652 1233489
Q ss_pred HHHHHHHHHHHHHHHHHHHH-cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004998 120 VYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 120 ~~~~~~i~~QIl~aL~yLHs-~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
|...-+|..-.+.||+||-. ..|||||+||+|||++..|.|||||||+|-+.-
T Consensus 166 E~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv-------------------------- 219 (361)
T KOG1006|consen 166 ENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV-------------------------- 219 (361)
T ss_pred HhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHH--------------------------
Confidence 99999999999999999996 689999999999999999999999999982210
Q ss_pred HhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004998 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
|- . ..+.-.|...||
T Consensus 220 ----------~S-i------------------------------------------------------AkT~daGCrpYm 234 (361)
T KOG1006|consen 220 ----------DS-I------------------------------------------------------AKTVDAGCRPYM 234 (361)
T ss_pred ----------HH-H------------------------------------------------------HhhhccCCcccc
Confidence 00 0 011135788999
Q ss_pred CCccccCC--CCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCcccc-----ccCchHHHHHHHcCCCC
Q 004998 279 SPEELAGA--PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL-----LKFPKEASFCLWLLHPE 348 (720)
Q Consensus 279 APE~l~~~--~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~-----~~~p~~~~li~~~L~~d 348 (720)
|||-+... .|+-+||+||||++|||+.| ||..++........+..+.+|.-.. ....+...||.-||.+|
T Consensus 235 APERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd 314 (361)
T KOG1006|consen 235 APERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKD 314 (361)
T ss_pred ChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcc
Confidence 99999543 38999999999999999999 5555554444444444443332221 13345569999999999
Q ss_pred CCCCCChHHHHcCcccCCC
Q 004998 349 PSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~ 367 (720)
-+.||...+++.+||+...
T Consensus 315 ~~~Rpky~~Lk~~~fyr~y 333 (361)
T KOG1006|consen 315 RSDRPKYDDLKKFPFYRMY 333 (361)
T ss_pred cccCcchhhhhcCchhhhh
Confidence 9999999999999999876
|
|
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.1e-27 Score=259.27 Aligned_cols=204 Identities=15% Similarity=0.181 Sum_probs=154.4
Q ss_pred eehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------------------
Q 004998 65 HSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------------------- 115 (720)
Q Consensus 65 ~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------------------------- 115 (720)
..|..+|.++. |||||++++ .+.... .+++|||| .+++|.++|.+..
T Consensus 88 ~~E~~~l~~l~~H~niv~~~~-~~~~~~---~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (401)
T cd05107 88 MSELKIMSHLGPHLNIVNLLG-ACTKGG---PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQ 163 (401)
T ss_pred HHHHHHHHhcCCCCCeEEEEE-EEccCC---CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccc
Confidence 36788999997 999999999 554433 57999999 9999999994321
Q ss_pred ----------------------------------------------------------------------CCCCHHHHHH
Q 004998 116 ----------------------------------------------------------------------RSVDVYECLH 125 (720)
Q Consensus 116 ----------------------------------------------------------------------~~l~~~~~~~ 125 (720)
..+++..++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 243 (401)
T cd05107 164 RKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVG 243 (401)
T ss_pred cccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHH
Confidence 1356778899
Q ss_pred HHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcc
Q 004998 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
|+.||+.||.|||+.||+||||||+|||++.++.++|+|||++.......
T Consensus 244 ~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~------------------------------ 293 (401)
T cd05107 244 FSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDS------------------------------ 293 (401)
T ss_pred HHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceeccccc------------------------------
Confidence 99999999999999999999999999999999999999998874321100
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC
Q 004998 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
.+ .......+++.|+|||.+.+
T Consensus 294 ---~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~ 315 (401)
T cd05107 294 ---NY-------------------------------------------------------ISKGSTFLPLKWMAPESIFN 315 (401)
T ss_pred ---cc-------------------------------------------------------ccCCCcCCCCceeChHHhcC
Confidence 00 00001246788999999988
Q ss_pred CCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||............+..+..++......+...+|+.+||+++|.+||++.+|++
T Consensus 316 ~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~ 394 (401)
T cd05107 316 NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVH 394 (401)
T ss_pred CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 889999999999999999997 565443333333334333222222223345569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=243.59 Aligned_cols=206 Identities=21% Similarity=0.245 Sum_probs=151.8
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|..+++.+.||||+++++ ++... .....+++||| .+++|.+++......+++..++.++.||+.||.|||+.||+
T Consensus 54 ~~ei~~l~~l~~~~i~~~~~-~~~~~-~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~ 131 (284)
T cd05038 54 EREIEILRTLDHENIVKYKG-VCEKP-GGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYI 131 (284)
T ss_pred HHHHHHHHhCCCCChheEEe-eeecC-CCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 36667899999999999998 44432 23367999999 89999999966555699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||||+||+++.++.++|+|||.+....... ++
T Consensus 132 H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------~~------------- 165 (284)
T cd05038 132 HRDLAARNILVESEDLVKISDFGLAKVLPEDK---------------------------------DY------------- 165 (284)
T ss_pred cCCCCHHhEEEcCCCCEEEcccccccccccCC---------------------------------cc-------------
Confidence 99999999999999999999998874332110 00
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.. ......++..|+|||.+.+..++.++|||||||++||
T Consensus 166 ----------------------------------------~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~e 204 (284)
T cd05038 166 ----------------------------------------YY-VKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYE 204 (284)
T ss_pred ----------------------------------------ee-ccCCCCCcccccCcHHHccCCCCcccchHHHhhhhhe
Confidence 00 0000134567999999988889999999999999999
Q ss_pred ccc---cCCCCchH--------------HHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC---PFSTGEEK--------------TRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt---pf~~~~~~--------------~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... ......+......+. .... ....+|+.+||.++|.+|||+.|+++
T Consensus 205 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 205 LFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPR-PPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred eeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCC-CccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 999 43322111 111112222221111 1223 34559999999999999999999985
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.1e-27 Score=268.05 Aligned_cols=188 Identities=16% Similarity=0.199 Sum_probs=129.2
Q ss_pred CCcEEEEEec-CCCCHHHHHhCCCCC-------------------CCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcE
Q 004998 93 IDPFVHAIEW-GDVSLRQWLDKPKRS-------------------VDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCF 152 (720)
Q Consensus 93 ~~~~~lv~E~-~ggsL~~~L~~~~~~-------------------l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NI 152 (720)
...+++|||| .+++|.+++...... .....+..|+.||+.||.|||++||+||||||+||
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NI 286 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNI 286 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHE
Confidence 3468999999 899999998543211 12345678999999999999999999999999999
Q ss_pred EEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCc
Q 004998 153 VMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 231 (720)
Q Consensus 153 Ll~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~ 231 (720)
|++. ++.+||+|||++....... +.
T Consensus 287 Ll~~~~~~~KL~DFGlA~~l~~~~---------------------------------~~--------------------- 312 (566)
T PLN03225 287 IFSEGSGSFKIIDLGAAADLRVGI---------------------------------NY--------------------- 312 (566)
T ss_pred EEeCCCCcEEEEeCCCcccccccc---------------------------------cc---------------------
Confidence 9985 5789999999884321100 00
Q ss_pred cccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC----------------------CC
Q 004998 232 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----------------------VS 289 (720)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----------------------~s 289 (720)
.....+||+.|+|||.+.... ++
T Consensus 313 -----------------------------------~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~ 357 (566)
T PLN03225 313 -----------------------------------IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLP 357 (566)
T ss_pred -----------------------------------CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCC
Confidence 001146788999999764322 34
Q ss_pred ccccchhhhhhhhhccccCCC-CchHHHHHHHhhcCCC---------Ccccccc-----------CchHHHHHHHcCCCC
Q 004998 290 CASDIYRLGVLLFELFCPFST-GEEKTRTMSSLRHRVL---------PPQLLLK-----------FPKEASFCLWLLHPE 348 (720)
Q Consensus 290 ~~sDIwSLGvll~eLltpf~~-~~~~~~~~~~l~~~~~---------p~~~~~~-----------~p~~~~li~~~L~~d 348 (720)
.++|||||||+||||++|... ..........+..... ++..... .....+||.+||++|
T Consensus 358 ~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~d 437 (566)
T PLN03225 358 DRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFK 437 (566)
T ss_pred CCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCC
Confidence 456999999999999995433 2222222222221111 1110000 111238999999999
Q ss_pred CCCCCChHHHHcCcccCCCcc
Q 004998 349 PSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~ 369 (720)
|.+|||+.++|+||||.....
T Consensus 438 P~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 438 GRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred cccCCCHHHHhCCcCcCCCCc
Confidence 999999999999999987633
|
|
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.5e-27 Score=246.62 Aligned_cols=210 Identities=18% Similarity=0.214 Sum_probs=156.6
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
...|..++.++ +||||+++++ .+..+. .+|+|||| .+++|.+++... ..+++..++.++.|++.||.|||+.|
T Consensus 51 ~~~E~~~l~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~ 125 (288)
T cd05583 51 TRTERQVLEAVRRCPFLVTLHY-AFQTDT---KLHLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQLG 125 (288)
T ss_pred HHHHHHHHHhccCCcchhhhhe-eeecCC---EEEEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHCC
Confidence 34677788888 6999999998 444433 57999999 889999999544 34899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
++||||||+||+++.++.++++|||++..+.... ..
T Consensus 126 ~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---------------------------------~~----------- 161 (288)
T cd05583 126 IIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE---------------------------------EE----------- 161 (288)
T ss_pred eeccCCCHHHeEECCCCCEEEEECcccccccccc---------------------------------cc-----------
Confidence 9999999999999999999999998874321110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC--CCccccchhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGV 299 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwSLGv 299 (720)
......|+..|+|||.+.+.. .+.++||||||+
T Consensus 162 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~ 196 (288)
T cd05583 162 ---------------------------------------------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGV 196 (288)
T ss_pred ---------------------------------------------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHH
Confidence 000135788999999987765 788999999999
Q ss_pred hhhhccc---cCCCCch---HHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC---hHHHHcCcccCCCc
Q 004998 300 LLFELFC---PFSTGEE---KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK---MGELLQSEFLNEPR 368 (720)
Q Consensus 300 ll~eLlt---pf~~~~~---~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt---a~eiL~hp~~~~~~ 368 (720)
++|||++ ||..... .......+.... ++......+...+|+.+||+.+|++||| +.++|+||||+...
T Consensus 197 il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~ 273 (288)
T cd05583 197 LTFELLTGASPFTVDGEQNSQSEISRRILKSK-PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGID 273 (288)
T ss_pred HHHHHHhCCCCcccCcccchHHHHHHHHHccC-CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCC
Confidence 9999999 5532211 111112222221 2221222345569999999999999998 56789999998863
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1e-27 Score=259.98 Aligned_cols=201 Identities=18% Similarity=0.243 Sum_probs=158.4
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|...|++-+|.||+=+.| ++..+. +.||.-+ .|-+|..+|.-...+|.....+.|++||++|++|||.++|||
T Consensus 437 nEVa~lkkTRH~NIlLFMG-~~~~p~----~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIH 511 (678)
T KOG0193|consen 437 NEVAVLKKTRHENILLFMG-ACMNPP----LAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIH 511 (678)
T ss_pred HHHHHHhhcchhhheeeeh-hhcCCc----eeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhh
Confidence 6777999999999999999 554442 4788888 999999999666667999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||..||+|.+++.|||.|||++.....-. ++-
T Consensus 512 rDLKSnNIFl~~~~kVkIgDFGLatvk~~w~--------------------------------g~~-------------- 545 (678)
T KOG0193|consen 512 RDLKSNNIFLHEDLKVKIGDFGLATVKTRWS--------------------------------GEQ-------------- 545 (678)
T ss_pred hhccccceEEccCCcEEEecccceeeeeeec--------------------------------ccc--------------
Confidence 9999999999999999998777763211100 000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC---CCCccccchhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLGVLL 301 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~s~~sDIwSLGvll 301 (720)
.....-|...|||||+++.. +|++.+|||||||++
T Consensus 546 ------------------------------------------q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~ 583 (678)
T KOG0193|consen 546 ------------------------------------------QLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVW 583 (678)
T ss_pred ------------------------------------------ccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHH
Confidence 00012467789999999644 499999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcc---ccccCchH-HHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---~~~~~p~~-~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||. ......++-.+..+.+.+. .....|++ .+|+..||.+++++||...+||.
T Consensus 584 YELltg~lPys-i~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 584 YELLTGELPYS-IQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred HHHHhCcCCcC-CCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 99999 887 4444455555555644443 34566744 49999999999999999999986
|
|
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.2e-26 Score=246.57 Aligned_cols=205 Identities=14% Similarity=0.112 Sum_probs=148.9
Q ss_pred hhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Q 004998 69 VELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 69 ~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
..+..+.|+||+++++............++++|+...++.+.+... ...++..++.++.||+.||+|||++||+|||||
T Consensus 75 ~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiK 153 (294)
T PHA02882 75 KNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIK 153 (294)
T ss_pred HHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhccCHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 3456789999999998444444444456888888667888877443 336888999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccC
Q 004998 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+|||++.++.++|+|||+++.+...... ...
T Consensus 154 p~Nill~~~~~~~l~DFGla~~~~~~~~~------------------------------~~~------------------ 185 (294)
T PHA02882 154 PENIMVDGNNRGYIIDYGIASHFIIHGKH------------------------------IEY------------------ 185 (294)
T ss_pred HHHEEEcCCCcEEEEEcCCceeeccCCcc------------------------------ccc------------------
Confidence 99999999999999999988543211000 000
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc--
Q 004998 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt-- 306 (720)
.........||+.|+|||++.+..++.++|||||||++|||++
T Consensus 186 -----------------------------------~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~ 230 (294)
T PHA02882 186 -----------------------------------SKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIK 230 (294)
T ss_pred -----------------------------------ccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 0000011368999999999999989999999999999999998
Q ss_pred -cCCCCchHHHH--------HHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 307 -PFSTGEEKTRT--------MSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 307 -pf~~~~~~~~~--------~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||......... ...+..... .....|+ ..+++..|+..+|++||++.++++
T Consensus 231 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 231 LPWKGFGHNGNLIHAAKCDFIKRLHEGKI---KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred CCCCccccchHHHHHhHHHHHHHhhhhhh---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 77654222111 122222111 1122344 449999999999999999999975
|
|
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=240.55 Aligned_cols=207 Identities=13% Similarity=0.087 Sum_probs=151.7
Q ss_pred eehhhhcccCCCCCceecccceeecCC--CCCcEEEEEec-CCCCHHHHHhC-----CCCCCCHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~-~ggsL~~~L~~-----~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
.+|..+|+.++||||+++++....... .....++++|| .+++|.+++.. ....++...++.++.||+.||+|
T Consensus 49 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~ 128 (273)
T cd05074 49 LREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEY 128 (273)
T ss_pred HHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 367789999999999999994333222 12245788999 88999988731 12247899999999999999999
Q ss_pred HHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||+.||+||||||+||+++.++.++++|||.+......... .
T Consensus 129 lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~------ 170 (273)
T cd05074 129 LSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYY--------------------------------R------ 170 (273)
T ss_pred HHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcce--------------------------------e------
Confidence 99999999999999999999999999998877432111000 0
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchh
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
......+++.|++||.+.+..++.++||||
T Consensus 171 --------------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~sDi~s 200 (273)
T cd05074 171 --------------------------------------------------QGCASKLPVKWLALESLADNVYTTHSDVWA 200 (273)
T ss_pred --------------------------------------------------cCCCccCchhhcCHhHHhcCccchhhhhHH
Confidence 000013456799999998888999999999
Q ss_pred hhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 297 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 297 LGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++|||++ ||..... ......+.............+...+++.+||..+|++||++.++++
T Consensus 201 lG~il~el~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 201 FGVTMWEIMTRGQTPYAGVEN-SEIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred HHHHHHHHhhCCCCCCCCCCH-HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999999997 4443333 2333333333222222233345569999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-26 Score=240.14 Aligned_cols=199 Identities=16% Similarity=0.235 Sum_probs=152.2
Q ss_pred ehhhhcc-cCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHH-
Q 004998 66 SDGVELT-HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHS- 139 (720)
Q Consensus 66 ~e~~~Ls-~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs- 139 (720)
.|..++. .++||||+++++ ++..+. ..+++||| .|++|.+++. .....+++..++.++.||+.||.|||+
T Consensus 57 ~e~~~l~~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 132 (269)
T cd08528 57 SEVTIIKEQLRHPNIVRYYK-TFLEND---RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE 132 (269)
T ss_pred HHHHHHhhcCCCCCeeeEEe-eEccCC---eEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC
Confidence 5555555 489999999999 444432 68999999 8999999882 334558999999999999999999996
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
.||+|+||||+||+++.++.++|+|||.+.......
T Consensus 133 ~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-------------------------------------------- 168 (269)
T cd08528 133 KRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES-------------------------------------------- 168 (269)
T ss_pred CceeecCCCHHHEEECCCCcEEEecccceeeccccc--------------------------------------------
Confidence 789999999999999999999999998873321100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......|+..|+|||.+.+..++.++|||||||
T Consensus 169 -----------------------------------------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ 201 (269)
T cd08528 169 -----------------------------------------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGC 201 (269)
T ss_pred -----------------------------------------------ccccccCcccCcChhhhcCCCCchHHHHHHHHH
Confidence 000135788899999999888999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCcccc-ccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~-~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|||++ ||...... .....+.....++... ...+...+|+.+||..||++||++.|+..
T Consensus 202 ll~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~ 265 (269)
T cd08528 202 ILYQMCTLQPPFYSTNML-SLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSA 265 (269)
T ss_pred HHHHHHhCCCcccccCHH-HHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHH
Confidence 9999999 55443332 2333333333333322 22345569999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.3e-27 Score=239.91 Aligned_cols=217 Identities=18% Similarity=0.289 Sum_probs=167.0
Q ss_pred cCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCc
Q 004998 73 HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSC 151 (720)
Q Consensus 73 ~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~N 151 (720)
.-+||.+|.+.. +|+.+. .+++|.|| .||+|.-.+ +..++++++.++.+...|+.||.|||++|||.||||.+|
T Consensus 307 asn~pflvglhs-cfqtes---rlffvieyv~ggdlmfhm-qrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldn 381 (593)
T KOG0695|consen 307 ASNNPFLVGLHS-CFQTES---RLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDN 381 (593)
T ss_pred ccCCCeEEehhh-hhcccc---eEEEEEEEecCcceeeeh-hhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccc
Confidence 468999999999 776665 57999999 999998777 445669999999999999999999999999999999999
Q ss_pred EEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCc
Q 004998 152 FVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 231 (720)
Q Consensus 152 ILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~ 231 (720)
+|++..|++||.|+|.|+.--.+ +|.
T Consensus 382 vlldaeghikltdygmcke~l~~---------------------------------gd~--------------------- 407 (593)
T KOG0695|consen 382 VLLDAEGHIKLTDYGMCKEGLGP---------------------------------GDT--------------------- 407 (593)
T ss_pred eEEccCCceeecccchhhcCCCC---------------------------------Ccc---------------------
Confidence 99999999999999999542111 221
Q ss_pred cccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cC
Q 004998 232 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PF 308 (720)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf 308 (720)
....+|||.|+|||+++|..|++++|+|+|||++|||+. ||
T Consensus 408 ------------------------------------tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspf 451 (593)
T KOG0695|consen 408 ------------------------------------TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPF 451 (593)
T ss_pred ------------------------------------cccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCc
Confidence 012689999999999999999999999999999999998 76
Q ss_pred CC------C-chHHHHHHHhh-cCCCCccccccCchHHHHHHHcCCCCCCCCC------ChHHHHcCcccCCC-ccchHH
Q 004998 309 ST------G-EEKTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRP------KMGELLQSEFLNEP-RDSMEE 373 (720)
Q Consensus 309 ~~------~-~~~~~~~~~l~-~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rp------ta~eiL~hp~~~~~-~~~l~e 373 (720)
.- . +...-.+..+. +.+.-|. +..-+...+++..|.+||.+|. ...++..|+||+.. ++.+++
T Consensus 452 divgm~n~d~ntedylfqvilekqiripr--slsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd~leq 529 (593)
T KOG0695|consen 452 DIVGMDNPDMNTEDYLFQVILEKQIRIPR--SLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWDLLEQ 529 (593)
T ss_pred ceecCCCcccchhHHHHHHHhhhcccccc--eeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHHHHhh
Confidence 42 1 12222333333 3332222 2234556899999999999995 47899999999976 455555
Q ss_pred HHHHHHHhhhhhH
Q 004998 374 REAAIELREQIDE 386 (720)
Q Consensus 374 ~~~~~~~~e~~~~ 386 (720)
+.-.+++.+.+..
T Consensus 530 k~v~ppf~p~i~~ 542 (593)
T KOG0695|consen 530 KQVLPPFQPQITD 542 (593)
T ss_pred cccCCCCCCcccc
Confidence 5555555555544
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=4e-26 Score=232.23 Aligned_cols=204 Identities=24% Similarity=0.293 Sum_probs=159.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|...+++++|+||+++++ .+... ...++++|| .+++|.+++..... ++...++.++.+|+.+|.|||+.||+
T Consensus 35 ~~e~~~~~~l~~~~i~~~~~-~~~~~---~~~~l~~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~ 109 (244)
T smart00220 35 LREISILKKLKHPNIVRLYD-VFEDE---DKLYLVMEYCDGGDLFDLLKKRGR-LSEDEARFYARQILSALEYLHSNGII 109 (244)
T ss_pred HHHHHHHHhCCCCcHHHHHh-heeeC---CEEEEEEeCCCCCCHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHHcCee
Confidence 36667888999999999999 44333 267999999 77799999955433 89999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+||+|.||+++.++.++++|||.+.......
T Consensus 110 h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~------------------------------------------------ 141 (244)
T smart00220 110 HRDLKPENILLDEDGHVKLADFGLARQLDPGG------------------------------------------------ 141 (244)
T ss_pred cCCcCHHHeEECCCCcEEEccccceeeecccc------------------------------------------------
Confidence 99999999999999999999998873321110
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......++..|+|||.+.+..++.++||||||+++|+
T Consensus 142 -------------------------------------------~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~ 178 (244)
T smart00220 142 -------------------------------------------LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYE 178 (244)
T ss_pred -------------------------------------------ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHH
Confidence 0001356888999999988888999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccc--cCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~--~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|++ ||............+.....+..... ......+++.+||..+|++||++.++++||||
T Consensus 179 l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 179 LLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred HHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 999 66553344444444444433332222 22345699999999999999999999999997
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-26 Score=224.59 Aligned_cols=207 Identities=15% Similarity=0.222 Sum_probs=156.0
Q ss_pred eehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.||+.||..|. ||||++++++ ..+.... ...+++|| ...+...+. ..++..+++.++.||+.||+|||++||
T Consensus 80 kREikIL~nL~gg~NIi~L~Di-V~Dp~Sk-tpaLiFE~v~n~Dfk~ly----~tl~d~dIryY~~elLkALdyCHS~GI 153 (338)
T KOG0668|consen 80 KREIKILQNLRGGPNIIKLLDI-VKDPESK-TPSLIFEYVNNTDFKQLY----PTLTDYDIRYYIYELLKALDYCHSMGI 153 (338)
T ss_pred HHHHHHHHhccCCCCeeehhhh-hcCcccc-CchhHhhhhccccHHHHh----hhhchhhHHHHHHHHHHHHhHHHhcCc
Confidence 38999999988 9999999994 4344333 45789999 888887755 348899999999999999999999999
Q ss_pred eeccCCCCcEEEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 143 VVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 143 vHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
+|||+||.|++|+. .-.++|||+|+|..+... .++
T Consensus 154 mHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~---------------------------------~eY----------- 189 (338)
T KOG0668|consen 154 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG---------------------------------KEY----------- 189 (338)
T ss_pred ccccCCcceeeechhhceeeeeecchHhhcCCC---------------------------------cee-----------
Confidence 99999999999994 456899998887332110 000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvl 300 (720)
...+.+..|.-||++..-+ |+.+-|+|||||+
T Consensus 190 -----------------------------------------------nVRVASRyfKGPELLVdy~~YDYSLD~WS~Gcm 222 (338)
T KOG0668|consen 190 -----------------------------------------------NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 222 (338)
T ss_pred -----------------------------------------------eeeeehhhcCCchheeechhccccHHHHHHHHH
Confidence 1145678899999997766 8999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHh-------------hc--CCCCccccc---------------------cCchHHHHH
Q 004998 301 LFELFC---PFSTGEEKTRTMSSL-------------RH--RVLPPQLLL---------------------KFPKEASFC 341 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l-------------~~--~~~p~~~~~---------------------~~p~~~~li 341 (720)
|..|+. ||..........-.+ .+ -.++|.+.. ..|+..||+
T Consensus 223 lA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDll 302 (338)
T KOG0668|consen 223 LASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLL 302 (338)
T ss_pred HHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHH
Confidence 999998 876543222111111 11 123332221 125566999
Q ss_pred HHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 342 LWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
.++|.+|-.+|+||.|++.||||....
T Consensus 303 dklLrYDHqeRlTakEam~HpyF~~~~ 329 (338)
T KOG0668|consen 303 DKLLRYDHQERLTAKEAMAHPYFAPVR 329 (338)
T ss_pred HHHHhhccccccchHHHhcCchHHHHH
Confidence 999999999999999999999998763
|
|
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1e-25 Score=253.06 Aligned_cols=211 Identities=18% Similarity=0.243 Sum_probs=163.5
Q ss_pred eehhhhccc-CCCCCceeccccee-ecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 65 HSDGVELTH-GDHLRNQGGLSGVC-ENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~Ls~-l~HpnIV~l~~~~~-~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
|.|..+|.. -+|||++.+|++++ .+....+++|+|||| .|||.-|++++ .+..+.|..+..|++.++.||.+||..
T Consensus 63 E~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n 142 (953)
T KOG0587|consen 63 ELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN 142 (953)
T ss_pred HHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc
Confidence 344445544 67999999999666 344566789999999 99999998833 366699999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
.++|||||-.|||++.++.|||+|||++.+..+..
T Consensus 143 kviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~--------------------------------------------- 177 (953)
T KOG0587|consen 143 KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTV--------------------------------------------- 177 (953)
T ss_pred ceeeecccCceEEEeccCcEEEeeeeeeeeeeccc---------------------------------------------
Confidence 99999999999999999999999999884421110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-----CCccccch
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-----VSCASDIY 295 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-----~s~~sDIw 295 (720)
| +....+|||.|||||++...+ |+..+|+|
T Consensus 178 ------------------------------g---------------rRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~W 212 (953)
T KOG0587|consen 178 ------------------------------G---------------RRNTFIGTPYWMAPEVIACDESPDATYDYRSDLW 212 (953)
T ss_pred ------------------------------c---------------cccCcCCCcccccceeeecccCCCCCcccccchh
Confidence 0 112258999999999996543 78899999
Q ss_pred hhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccc--cccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL--LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~--~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++..||.- |+....+.-.++...+ .+||.+ +..|.+.. +||..||++|-.+||++.++|+|||++..
T Consensus 213 sLGITaIEladG~PPl~DmHPmraLF~IpR--NPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~ 288 (953)
T KOG0587|consen 213 SLGITAIEMAEGAPPLCDMHPMRALFLIPR--NPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQ 288 (953)
T ss_pred hccceeehhcCCCCCccCcchhhhhccCCC--CCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCccccc
Confidence 99999999998 3333333322222222 334433 34565554 99999999999999999999999999954
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.2e-26 Score=252.80 Aligned_cols=205 Identities=19% Similarity=0.233 Sum_probs=144.0
Q ss_pred ecCCCcccccccccCCcccccccccC-CCCCC---ccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeec
Q 004998 14 IMEGSSDSAWQDSDSSRALNISGVSD-RNPRL---LRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCEN 89 (720)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~ 89 (720)
.|.+...-.|...+..+..+.+.|-. +|... .+++.+ .....-.-+-|--+|..+|.+++|||||++++ +-++
T Consensus 6 ~l~~~~~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~--~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~-iee~ 82 (732)
T KOG4250|consen 6 VLTSGENYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTF--NKESSLRPRERWCREIEILKKLNHPNIVKLFD-IEET 82 (732)
T ss_pred ccccCCCcceeehhhhcCCccceeeeecccccccchhHHhh--hhhcccchHHHHHHHHHHHHHcCchhhhhhcc-cCCc
Confidence 45555566788866544333333322 33322 222221 11211222224448999999999999999999 4433
Q ss_pred CC---CCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEcc--CCc--
Q 004998 90 EA---AIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSS--FNH-- 159 (720)
Q Consensus 90 ~~---~~~~~~lv~E~-~ggsL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~--~~~-- 159 (720)
.. -...-.++||| .||||+..|+++ ...|++.+++.++..++.||.|||++|||||||||.||++-. +|+
T Consensus 83 ~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~I 162 (732)
T KOG4250|consen 83 KFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSI 162 (732)
T ss_pred cccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceE
Confidence 32 03346899999 999999999543 345999999999999999999999999999999999999863 233
Q ss_pred eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccc
Q 004998 160 VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLV 239 (720)
Q Consensus 160 vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~ 239 (720)
.||+|||.|+....++
T Consensus 163 yKLtDfG~Arel~d~s---------------------------------------------------------------- 178 (732)
T KOG4250|consen 163 YKLTDFGAARELDDNS---------------------------------------------------------------- 178 (732)
T ss_pred EeeecccccccCCCCC----------------------------------------------------------------
Confidence 5676666664432210
Q ss_pred cccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhhhhccc---cCCCCc
Q 004998 240 EGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFELFC---PFSTGE 312 (720)
Q Consensus 240 ~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~eLlt---pf~~~~ 312 (720)
.-+..+||+.|.+||++.. ..|+.-+|.|||||++|++.| ||.+..
T Consensus 179 ---------------------------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~ 228 (732)
T KOG4250|consen 179 ---------------------------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFG 228 (732)
T ss_pred ---------------------------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence 0023689999999999984 779999999999999999999 666553
|
|
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=3e-26 Score=247.49 Aligned_cols=202 Identities=19% Similarity=0.206 Sum_probs=162.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.-.|+.++.+++|||||+++| ++... ++|||||+ .-|.|+.||..+...++......+.+||+.||.|||+..+
T Consensus 438 flqEa~iMrnfdHphIikLIG-v~~e~----P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrf 512 (974)
T KOG4257|consen 438 FLQEASIMRNFDHPHIIKLIG-VCVEQ----PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRF 512 (974)
T ss_pred HHHHHHHHHhCCCcchhheee-eeecc----ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhch
Confidence 338889999999999999999 56554 47999999 8899999997777779999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||-..|||+.+...|||.|||+++-...+..-
T Consensus 513 VHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yY--------------------------------------------- 547 (974)
T KOG4257|consen 513 VHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYY--------------------------------------------- 547 (974)
T ss_pred hhhhhhhhheeecCcceeeecccchhhhccccchh---------------------------------------------
Confidence 99999999999999999999888777433211000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.. ..... ..-|||||-++-..++.+||||-|||.+|
T Consensus 548 ka-----------------------------------S~~kL---------PIKWmaPESINfRrFTtASDVWMFgVCmW 583 (974)
T KOG4257|consen 548 KA-----------------------------------SRGKL---------PIKWMAPESINFRRFTTASDVWMFGVCMW 583 (974)
T ss_pred hc-----------------------------------ccccc---------ceeecCccccchhcccchhhHHHHHHHHH
Confidence 00 01111 34599999999999999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++. ||.+-... ..+..+.++..+|..+..-|....|+.+||.+||.+||++.+|..
T Consensus 584 EIl~lGvkPfqgvkNs-DVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 584 EILSLGVKPFQGVKNS-DVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred HHHHhcCCcccccccc-ceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 9998 88876554 344455566666655545455569999999999999999988863
|
|
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.2e-26 Score=243.88 Aligned_cols=201 Identities=20% Similarity=0.221 Sum_probs=162.5
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|+.++..++|||+|+|++ +|..+. +|||+.|| +.|+|.+||+... ..++....+.++.||..|+.||..+++|
T Consensus 312 kEAAvMKeikHpNLVqLLG-VCT~Ep---PFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFI 387 (1157)
T KOG4278|consen 312 KEAAVMKEIKHPNLVQLLG-VCTHEP---PFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFI 387 (1157)
T ss_pred HHHHHHHhhcCccHHHHhh-hhccCC---CeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhh
Confidence 6778999999999999999 554443 79999999 9999999996543 3478888889999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||-..|.|+.++..||++|||+++....+.+.
T Consensus 388 HRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYT---------------------------------------------- 421 (1157)
T KOG4278|consen 388 HRDLAARNCLVGENHIVKVADFGLSRLMTGDTYT---------------------------------------------- 421 (1157)
T ss_pred hhhhhhhhccccccceEEeeccchhhhhcCCcee----------------------------------------------
Confidence 9999999999999999999888877443222110
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
+ ..+..||+ -|.|||-+....++.++|||+|||+|||
T Consensus 422 ------------------------A----------HAGAKFPI---------KWTAPEsLAyNtFSiKSDVWAFGVLLWE 458 (1157)
T KOG4278|consen 422 ------------------------A----------HAGAKFPI---------KWTAPESLAYNTFSIKSDVWAFGVLLWE 458 (1157)
T ss_pred ------------------------c----------ccCccCcc---------cccCcccccccccccchhhHHHHHHHHH
Confidence 0 11233443 4899999999999999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+.| ||++.+- ...+..+.++.........-|+..+|++.||++.|++||+++||-+
T Consensus 459 IATYGMsPYPGidl-SqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHq 518 (1157)
T KOG4278|consen 459 IATYGMSPYPGIDL-SQVYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQ 518 (1157)
T ss_pred HHhcCCCCCCCccH-HHHHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHH
Confidence 998 7877544 3666666666655555556677779999999999999999999854
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.2e-25 Score=232.49 Aligned_cols=214 Identities=16% Similarity=0.219 Sum_probs=159.9
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH--cCc
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS--QGI 142 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs--~gI 142 (720)
||..|-..|+||.||++|+.+-.+.. .||.|+|| .|.+|.-||+++. .+++.+++.|+.||+.||.||.. -.|
T Consensus 516 REyrIHKeLDHpRIVKlYDyfslDtd---sFCTVLEYceGNDLDFYLKQhk-lmSEKEARSIiMQiVnAL~YLNEikpPI 591 (775)
T KOG1151|consen 516 REYRIHKELDHPRIVKLYDYFSLDTD---SFCTVLEYCEGNDLDFYLKQHK-LMSEKEARSIIMQIVNALKYLNEIKPPI 591 (775)
T ss_pred HHHhhhhccCcceeeeeeeeeeeccc---cceeeeeecCCCchhHHHHhhh-hhhHHHHHHHHHHHHHHHHHHhccCCCe
Confidence 77778889999999999994434433 58999999 9999999996554 48999999999999999999997 479
Q ss_pred eeccCCCCcEEEc---cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 143 VVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||-||||.||||- ..|.+||.|||+++....++.. .+.|+.-+
T Consensus 592 IHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~------------------------------~vdGmeLT---- 637 (775)
T KOG1151|consen 592 IHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYN------------------------------SVDGMELT---- 637 (775)
T ss_pred eeeccCCccEEEecCcccceeEeeecchhhhccCCccC------------------------------cccceeee----
Confidence 9999999999995 4577999888888665433221 11111000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC----CCCccccch
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----PVSCASDIY 295 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~s~~sDIw 295 (720)
....||.||++||.+.-. ..+.++|||
T Consensus 638 -------------------------------------------------SQgAGTYWYLPPEcFvVgkePPKIsnKVDVW 668 (775)
T KOG1151|consen 638 -------------------------------------------------SQGAGTYWYLPPECFVVGKEPPKISNKVDVW 668 (775)
T ss_pred -------------------------------------------------cccCceeeecCcceeecCCCCCccccceeeE
Confidence 014789999999998544 279999999
Q ss_pred hhhhhhhhccc---cCCCCchHHHHHH-----HhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 296 RLGVLLFELFC---PFSTGEEKTRTMS-----SLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~-----~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|||+|..+. ||........++. ....-.+|+. +--.+...+||++||.+--++|..+.++..||||..-
T Consensus 669 SvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~K-PvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh 747 (775)
T KOG1151|consen 669 SVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPK-PVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPH 747 (775)
T ss_pred eeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCC-CccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccch
Confidence 99999999998 6765432222211 1111223333 2234555699999999999999999999999998763
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.6e-25 Score=232.47 Aligned_cols=92 Identities=14% Similarity=0.053 Sum_probs=79.3
Q ss_pred ehhhhcccC--------CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHG--------DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 66 ~e~~~Ls~l--------~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
-|+.+|.++ .-.+||+|++.|-..+.++.++|+|+|+.|.+|..|| ....+.++...++.|++||+.||+|
T Consensus 123 DEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdY 202 (590)
T KOG1290|consen 123 DEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDY 202 (590)
T ss_pred HHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHH
Confidence 455566553 2357999999888999999999999999999999999 4455669999999999999999999
Q ss_pred HHH-cCceeccCCCCcEEEccC
Q 004998 137 AHS-QGIVVHNVRPSCFVMSSF 157 (720)
Q Consensus 137 LHs-~gIvHrDLKP~NILl~~~ 157 (720)
||. .||||-||||+|||+...
T Consensus 203 LH~ecgIIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 203 LHRECGIIHTDLKPENVLLCST 224 (590)
T ss_pred HHHhcCccccCCCcceeeeecc
Confidence 997 599999999999999754
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-25 Score=249.12 Aligned_cols=203 Identities=16% Similarity=0.233 Sum_probs=163.9
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+-.|+.||.+++||||++|-|++-... +++|+.|| ++|+|..||+++.+.++..+..-+++.|+.|+.||-+.|+
T Consensus 677 FL~EAsIMGQFdHPNIIrLEGVVTks~----PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~Y 752 (996)
T KOG0196|consen 677 FLSEASIMGQFDHPNIIRLEGVVTKSK----PVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNY 752 (996)
T ss_pred hhhhhhhcccCCCCcEEEEEEEEecCc----eeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCc
Confidence 338899999999999999999544433 68999999 9999999998887889999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||-..|||++.+-..|+.|||+++....+.
T Consensus 753 VHRDLAARNILVNsnLvCKVsDFGLSRvledd~----------------------------------------------- 785 (996)
T KOG0196|consen 753 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP----------------------------------------------- 785 (996)
T ss_pred hhhhhhhhheeeccceEEEeccccceeecccCC-----------------------------------------------
Confidence 999999999999999999998888875432110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
+..+...| ... ...|.|||.+...+++.+|||||+||+||
T Consensus 786 ---------------------~~~ytt~G----------GKI---------PiRWTAPEAIa~RKFTsASDVWSyGIVmW 825 (996)
T KOG0196|consen 786 ---------------------EAAYTTLG----------GKI---------PIRWTAPEAIAYRKFTSASDVWSYGIVMW 825 (996)
T ss_pred ---------------------CccccccC----------Ccc---------ceeecChhHhhhcccCchhhccccceEEE
Confidence 00011111 111 35799999999999999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcC-CCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHR-VLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~-~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|.++ ||...... ..++.+..+ .+||. -.+|... .|+++||++|-.+||++.+|+.
T Consensus 826 EVmSyGERPYWdmSNQ-dVIkaIe~gyRLPpP--mDCP~aL~qLMldCWqkdR~~RP~F~qiV~ 886 (996)
T KOG0196|consen 826 EVMSYGERPYWDMSNQ-DVIKAIEQGYRLPPP--MDCPAALYQLMLDCWQKDRNRRPKFAQIVS 886 (996)
T ss_pred EecccCCCcccccchH-HHHHHHHhccCCCCC--CCCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence 9998 88887666 445555544 34443 2455555 9999999999999999999986
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.4e-26 Score=227.15 Aligned_cols=214 Identities=20% Similarity=0.249 Sum_probs=158.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCC---cEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAID---PFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~---~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
|..+|..+|..++|.|++..++ +.+.. +.. .+|++.|+...+|...|-.+. .++...++-+++||+.||.|||+
T Consensus 98 rvFre~kmLcfFkHdNVLSaLD-ILQPp-h~dfFqEiYV~TELmQSDLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYLHs 174 (449)
T KOG0664|consen 98 RVFREIKMLSSFRHDNVLSLLD-ILQPA-NPSFFQELYVLTELMQSDLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYLHT 174 (449)
T ss_pred HHHHHHHHHHhhccccHHHHHH-hcCCC-CchHHHHHHHHHHHHHhhhhheeccCC-CCCcchhhhhHHHHHhhhHHHhh
Confidence 6668888999999999999999 33322 221 258889998889999885554 49999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
.||.||||||.|+|++++..+||||||+++....+..
T Consensus 175 A~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~------------------------------------------- 211 (449)
T KOG0664|consen 175 ANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDR------------------------------------------- 211 (449)
T ss_pred cchhhccCCCccEEeccCceEEecccccccccchhhh-------------------------------------------
Confidence 9999999999999999999999988888754322100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLG 298 (720)
..| +..+-|.+|+|||++.|.. |+.++||||+|
T Consensus 212 --------------------------------------------~hM--TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVG 245 (449)
T KOG0664|consen 212 --------------------------------------------LNM--THEVVTQYYRAPELLMGARRYTGAVDIWSVG 245 (449)
T ss_pred --------------------------------------------hhh--HHHHHHHHhccHHHhhcchhhcCccceehhh
Confidence 000 1135688999999999987 99999999999
Q ss_pred hhhhhccc---cCCCCch--------------HHHHHHH---------hhcCCCCccccccC---------chHHHHHHH
Q 004998 299 VLLFELFC---PFSTGEE--------------KTRTMSS---------LRHRVLPPQLLLKF---------PKEASFCLW 343 (720)
Q Consensus 299 vll~eLlt---pf~~~~~--------------~~~~~~~---------l~~~~~p~~~~~~~---------p~~~~li~~ 343 (720)
||+.||+. -|....+ ..+.|.. ++....+|.+.-.+ -...+++..
T Consensus 246 CIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~ 325 (449)
T KOG0664|consen 246 CIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQK 325 (449)
T ss_pred HHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHH
Confidence 99999997 2322111 1111211 22223333322111 122378899
Q ss_pred cCCCCCCCCCChHHHHcCcccCCCc
Q 004998 344 LLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 344 ~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|++||.+|.+.++++.|+++.+.+
T Consensus 326 ~l~~d~dkris~~~A~~~~~~~e~R 350 (449)
T KOG0664|consen 326 LLHFDPDKRISVEEALQHRYLEEGR 350 (449)
T ss_pred HhCCCCcccccHhhhcccccccccc
Confidence 9999999999999999999987753
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.3e-26 Score=243.47 Aligned_cols=205 Identities=16% Similarity=0.154 Sum_probs=154.2
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCC-CCHHHHHHHHHHHHHHHHHHHH
Q 004998 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRS-VDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~-l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+-..+|+.+|++++|||||++++++..++ ++++++|| ..|+|.+||.++..+ +.-.....|+.||+.|++||.+
T Consensus 580 ~~F~kEIkiLsqLkhPNIveLvGVC~~De----PicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes 655 (807)
T KOG1094|consen 580 NDFLKEIKILSRLKHPNIVELLGVCVQDD----PLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLES 655 (807)
T ss_pred HHHHHHHHHHhccCCCCeeEEEeeeecCC----chHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHh
Confidence 34448899999999999999999555555 57999999 889999999555333 3556677799999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
.++|||||.+.|+|++.++++||+|||.++..-. +|+
T Consensus 656 ~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lys----------------------------------g~y--------- 692 (807)
T KOG1094|consen 656 LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYS----------------------------------GDY--------- 692 (807)
T ss_pred hchhhccccccceeecCcccEEecCccccccccc----------------------------------CCc---------
Confidence 9999999999999999999999999988853211 111
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.+. +...+-...|||||.+.-++++++||+|+|||
T Consensus 693 -------------------------y~v--------------------qgr~vlpiRwmawEsillgkFttaSDvWafgv 727 (807)
T KOG1094|consen 693 -------------------------YRV--------------------QGRAVLPIRWMAWESILLGKFTTASDVWAFGV 727 (807)
T ss_pred -------------------------eee--------------------ecceeeeeeehhHHHHHhccccchhhhhhhHH
Confidence 000 00123356899999999899999999999999
Q ss_pred hhhhccc-----cCCCCchHHHHHHHhh----cCCC--CccccccCchHH-HHHHHcCCCCCCCCCChHHHH
Q 004998 300 LLFELFC-----PFSTGEEKTRTMSSLR----HRVL--PPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 300 ll~eLlt-----pf~~~~~~~~~~~~l~----~~~~--p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL 359 (720)
++||+++ ||...... ....+.. ++.. -+..+..+|... +++++||..|-.+||+.+++.
T Consensus 728 TlwE~~~~C~e~Py~~lt~e-~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh 798 (807)
T KOG1094|consen 728 TLWEVFMLCREQPYSQLTDE-QVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLH 798 (807)
T ss_pred HHHHHHHHHhhCchhhhhHH-HHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHH
Confidence 9999998 88765433 2222221 1111 111223445444 999999999999999999984
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.8e-25 Score=216.20 Aligned_cols=159 Identities=18% Similarity=0.211 Sum_probs=122.3
Q ss_pred CCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCccccccccc
Q 004998 105 VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQN 184 (720)
Q Consensus 105 gsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~ 184 (720)
|+|.+++...+..+++.+++.|+.||+.||.|||+++ ||+|||++.++.+++ ||.+...+..
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~---------- 62 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE---------- 62 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc----------
Confidence 6899999765667999999999999999999999998 999999999999998 8876321100
Q ss_pred ccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCC
Q 004998 185 METKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPF 264 (720)
Q Consensus 185 ~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~ 264 (720)
T Consensus 63 -------------------------------------------------------------------------------- 62 (176)
T smart00750 63 -------------------------------------------------------------------------------- 62 (176)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCc-----cccccCc-
Q 004998 265 PMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-----QLLLKFP- 335 (720)
Q Consensus 265 ~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-----~~~~~~p- 335 (720)
...||+.|+|||++.+..++.++|||||||++|||++ ||............+.....+. ......+
T Consensus 63 -----~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (176)
T smart00750 63 -----QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSA 137 (176)
T ss_pred -----cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHh
Confidence 0246899999999999999999999999999999999 6654333222333332221111 1111222
Q ss_pred --hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 336 --KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 336 --~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
...+|+.+||..+|.+||++.|+++|+|+..
T Consensus 138 ~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 138 ARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred hhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 3569999999999999999999999998753
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.9e-25 Score=234.20 Aligned_cols=204 Identities=17% Similarity=0.262 Sum_probs=153.7
Q ss_pred ehhhhcccCCC------CCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCC--CCCHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDH------LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 66 ~e~~~Ls~l~H------pnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~--~l~~~~~~~i~~QIl~aL~yL 137 (720)
+|..||.+|+- -|+|+||..|+. ..++|||+|-...+|++.|++.+. .|....++.|+.|++.||..|
T Consensus 477 ~EleiLkKL~~AD~Edk~Hclrl~r~F~h----knHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklL 552 (752)
T KOG0670|consen 477 KELEILKKLNDADPEDKFHCLRLFRHFKH----KNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLL 552 (752)
T ss_pred HHHHHHHHhhccCchhhhHHHHHHHHhhh----cceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHH
Confidence 56678887763 478898884433 337899999988899999976554 378889999999999999999
Q ss_pred HHcCceeccCCCCcEEEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 138 HSQGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
-..||+|.||||+|||++. .+.+||||||.|...+...+.
T Consensus 553 K~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneit--------------------------------------- 593 (752)
T KOG0670|consen 553 KKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEIT--------------------------------------- 593 (752)
T ss_pred HhcCeeecccCccceEeccCcceeeeccCcccccccccccc---------------------------------------
Confidence 9999999999999999995 456899999988554333211
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchh
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
+++-+..|.|||++.|.+|++..|+||
T Consensus 594 -----------------------------------------------------PYLVSRFYRaPEIiLG~~yd~~iD~WS 620 (752)
T KOG0670|consen 594 -----------------------------------------------------PYLVSRFYRAPEIILGLPYDYPIDTWS 620 (752)
T ss_pred -----------------------------------------------------HHHHHHhccCcceeecCcccCCcccee
Confidence 245577899999999999999999999
Q ss_pred hhhhhhhcccc---CCCCchH--HHHHHHhhcCCCCcc------------------------------------------
Q 004998 297 LGVLLFELFCP---FSTGEEK--TRTMSSLRHRVLPPQ------------------------------------------ 329 (720)
Q Consensus 297 LGvll~eLltp---f~~~~~~--~~~~~~l~~~~~p~~------------------------------------------ 329 (720)
+||+||||.|+ |++.... ...+..+. +.+|..
T Consensus 621 vgctLYElYtGkIlFpG~TNN~MLrl~me~K-Gk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtk 699 (752)
T KOG0670|consen 621 VGCTLYELYTGKILFPGRTNNQMLRLFMELK-GKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTK 699 (752)
T ss_pred eceeeEEeeccceecCCCCcHHHHHHHHHhc-CCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcch
Confidence 99999999993 5544322 11111111 111100
Q ss_pred -cc----c--cCch--------HHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 330 -LL----L--KFPK--------EASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 330 -~~----~--~~p~--------~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
+. . .+|. ..+|+..||..||++|.|+.++|+||||++
T Consensus 700 dl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 700 DLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred hHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 00 0 0111 238999999999999999999999999985
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.7e-25 Score=229.66 Aligned_cols=212 Identities=15% Similarity=0.186 Sum_probs=154.0
Q ss_pred ccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 004998 59 DFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 59 ~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.+.||+ +|+.----|+|+||+.+++.=..+.....++|||.+| +.|||.|||... .++......++..++.||+||
T Consensus 248 ~SWfrE-tEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~--tv~~~~ml~LalS~AsGLaHL 324 (513)
T KOG2052|consen 248 RSWFRE-TEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRN--TVTTEGMLKLALSIASGLAHL 324 (513)
T ss_pred hhhhhH-HHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhc--cCCHHHHHHHHHHHhhhHHHH
Confidence 344443 3433333488999999999656666677789999999 999999999663 399999999999999999999
Q ss_pred HH--------cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccc
Q 004998 138 HS--------QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 209 (720)
Q Consensus 138 Hs--------~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~D 209 (720)
|- -.|+|||||..|||+..+|...|+|+|+|.....+.
T Consensus 325 H~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t---------------------------------- 370 (513)
T KOG2052|consen 325 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDT---------------------------------- 370 (513)
T ss_pred HHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccC----------------------------------
Confidence 94 359999999999999999999999888884322210
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC--
Q 004998 210 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-- 287 (720)
Q Consensus 210 fgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-- 287 (720)
...++.....+||..|||||++...-
T Consensus 371 ----------------------------------------------------~~idi~~N~rVGTKRYMAPEvLdetin~ 398 (513)
T KOG2052|consen 371 ----------------------------------------------------DTIDIPPNPRVGTKRYMAPEVLDETINM 398 (513)
T ss_pred ----------------------------------------------------CcccCCCCCccceeeccChHHhhhhcCh
Confidence 00111223369999999999996543
Q ss_pred ----CCccccchhhhhhhhhccc-------------cCCCC---chHHHHHH-HhhcCCCCccccccC---ch---HHHH
Q 004998 288 ----VSCASDIYRLGVLLFELFC-------------PFSTG---EEKTRTMS-SLRHRVLPPQLLLKF---PK---EASF 340 (720)
Q Consensus 288 ----~s~~sDIwSLGvll~eLlt-------------pf~~~---~~~~~~~~-~l~~~~~p~~~~~~~---p~---~~~l 340 (720)
.-..+||||||.++||+.. ||... ++..+.|. .+.-..+.|.+++.| |. ...+
T Consensus 399 ~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~kl 478 (513)
T KOG2052|consen 399 KHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKL 478 (513)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHH
Confidence 1346899999999999986 66543 23333333 222333444444433 22 2389
Q ss_pred HHHcCCCCCCCCCChHHHH
Q 004998 341 CLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 341 i~~~L~~dP~~Rpta~eiL 359 (720)
++.||+.||..|.||-.|.
T Consensus 479 MkeCW~~Np~aRltALriK 497 (513)
T KOG2052|consen 479 MKECWYANPAARLTALRIK 497 (513)
T ss_pred HHHhhcCCchhhhHHHHHH
Confidence 9999999999999886553
|
|
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.2e-24 Score=237.84 Aligned_cols=206 Identities=17% Similarity=0.149 Sum_probs=163.7
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|+.+|.+|+|||+|+|||++.. . ...+|||+ ..|+|.+.|++ ....|.......|+.||+.|+.||.++++|
T Consensus 160 rEas~M~~L~H~hliRLyGvVl~-q----p~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlv 234 (1039)
T KOG0199|consen 160 REASHMLKLQHPHLIRLYGVVLD-Q----PAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLV 234 (1039)
T ss_pred HHHHHHHhccCcceeEEeeeecc-c----hhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 67779999999999999995554 3 46899999 99999999965 555688889999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||-..|+|+-....|||+|||+.+..|..+-... |
T Consensus 235 HRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yv------------------------------m------------- 271 (1039)
T KOG0199|consen 235 HRDLAARNLLLASPRTVKICDFGLMRALGENEDMYV------------------------------M------------- 271 (1039)
T ss_pred hhhhhhhhheecccceeeeecccceeccCCCCcceE------------------------------e-------------
Confidence 999999999999999999999988866544311000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
+ .. ..-...|+|||.+....++.+||+|++||++||
T Consensus 272 ---------------------------~------p~-----------rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWE 307 (1039)
T KOG0199|consen 272 ---------------------------A------PQ-----------RKVPFAWCAPESLRHRKFSHASDVWMYGVTIWE 307 (1039)
T ss_pred ---------------------------c------CC-----------CcCcccccCHhHhccccccccchhhhhhhhHHh
Confidence 0 00 112456999999999999999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|++ ||.+.... .++..+..+..-+.......+..++++.||..+|.+|||+..|...-+.
T Consensus 308 MFtyGEePW~G~~g~-qIL~~iD~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l 371 (1039)
T KOG0199|consen 308 MFTYGEEPWVGCRGI-QILKNIDAGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVL 371 (1039)
T ss_pred hhccCCCCCCCCCHH-HHHHhccccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHH
Confidence 999 77776554 5666666665555444444455599999999999999999988754333
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.9e-25 Score=235.43 Aligned_cols=147 Identities=24% Similarity=0.352 Sum_probs=128.0
Q ss_pred ehhhhcccCC---CCCceecccceeecCCCCCcEEEEEec--CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 66 SDGVELTHGD---HLRNQGGLSGVCENEAAIDPFVHAIEW--GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 66 ~e~~~Ls~l~---HpnIV~l~~~~~~~~~~~~~~~lv~E~--~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.|+.||+.++ |+||+++++ +|+++. .+|++||. .|.+|.++|..+. .++|.++..||+||+.|+++||++
T Consensus 615 ~EIqIla~l~~~sH~NIlKlLd-fFEddd---~yyl~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQV~agi~hlh~~ 689 (772)
T KOG1152|consen 615 SEIQILATLNKHSHENILKLLD-FFEDDD---YYYLETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQVVAGIKHLHDQ 689 (772)
T ss_pred hhHHHHHHhhhcCccchhhhhh-eeecCC---eeEEEecCCCCCcchhhhhhccC-ccchHHHHHHHHHHHhcccccccc
Confidence 7888999998 999999999 887775 68999998 8899999995444 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||||-+|+.++.+|-+||||||.+.-. +-+-|
T Consensus 690 ~ivhrdikdenvivd~~g~~klidfgsaa~~----------------------------------ksgpf---------- 725 (772)
T KOG1152|consen 690 GIVHRDIKDENVIVDSNGFVKLIDFGSAAYT----------------------------------KSGPF---------- 725 (772)
T ss_pred CceecccccccEEEecCCeEEEeeccchhhh----------------------------------cCCCc----------
Confidence 9999999999999999999999999987321 00111
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGv 299 (720)
...+||..|.|||++.|.+| +..-|||+||+
T Consensus 726 ------------------------------------------------d~f~gtv~~aapevl~g~~y~gk~qdiwalgi 757 (772)
T KOG1152|consen 726 ------------------------------------------------DVFVGTVDYAAPEVLGGEKYLGKPQDIWALGI 757 (772)
T ss_pred ------------------------------------------------ceeeeeccccchhhhCCCccCCCcchhhhhhh
Confidence 12589999999999999986 88899999999
Q ss_pred hhhhccc---cCC
Q 004998 300 LLFELFC---PFS 309 (720)
Q Consensus 300 ll~eLlt---pf~ 309 (720)
+||.++. ||.
T Consensus 758 llytivykenpyy 770 (772)
T KOG1152|consen 758 LLYTIVYKENPYY 770 (772)
T ss_pred eeeEEEeccCCCc
Confidence 9999887 664
|
|
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.1e-23 Score=236.86 Aligned_cols=212 Identities=17% Similarity=0.176 Sum_probs=140.9
Q ss_pred ehhhhcccCCCCCc-----eecccceeecC----CCCCcEEEEEec-CCCCHHHHHhCCC--------------------
Q 004998 66 SDGVELTHGDHLRN-----QGGLSGVCENE----AAIDPFVHAIEW-GDVSLRQWLDKPK-------------------- 115 (720)
Q Consensus 66 ~e~~~Ls~l~HpnI-----V~l~~~~~~~~----~~~~~~~lv~E~-~ggsL~~~L~~~~-------------------- 115 (720)
.|..++.+++|.++ +++++.+.... ......++|||| .+++|.++|....
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 35556666766655 56666222111 112347999999 9999999985321
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCC
Q 004998 116 ---RSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSS 192 (720)
Q Consensus 116 ---~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~ 192 (720)
..+++..++.++.||+.+|.|||+++|+||||||+|||++.++.+||+|||++.......
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~----------------- 363 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI----------------- 363 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCC-----------------
Confidence 123567788999999999999999999999999999999999999999999874321100
Q ss_pred CCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccc
Q 004998 193 PLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLM 272 (720)
Q Consensus 193 ~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~ 272 (720)
.+ ......
T Consensus 364 ----------------~~--------------------------------------------------------~~~~g~ 371 (507)
T PLN03224 364 ----------------NF--------------------------------------------------------NPLYGM 371 (507)
T ss_pred ----------------cc--------------------------------------------------------CccccC
Confidence 00 000024
Q ss_pred cCCcccCCccccCCC--------------------CC--ccccchhhhhhhhhccccCC-CCch---HH----------H
Q 004998 273 ETNWYASPEELAGAP--------------------VS--CASDIYRLGVLLFELFCPFS-TGEE---KT----------R 316 (720)
Q Consensus 273 GT~~Y~APE~l~~~~--------------------~s--~~sDIwSLGvll~eLltpf~-~~~~---~~----------~ 316 (720)
+|+.|+|||++.... |+ ...||||+||++|+|++|.. +... .. .
T Consensus 372 ~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~ 451 (507)
T PLN03224 372 LDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLN 451 (507)
T ss_pred CCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHH
Confidence 588999999985432 11 24799999999999998432 1110 00 0
Q ss_pred HHHHhhcCCCC-ccccccCchHHHHHHHcCCCCC---CCCCChHHHHcCcccCC
Q 004998 317 TMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEP---SGRPKMGELLQSEFLNE 366 (720)
Q Consensus 317 ~~~~l~~~~~p-~~~~~~~p~~~~li~~~L~~dP---~~Rpta~eiL~hp~~~~ 366 (720)
.+.......+. +.+....+...+|+.+||..+| .+|+|+.|+|+||||..
T Consensus 452 ~~r~~~~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 452 RWRMYKGQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred HHHhhcccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 01111111111 1122233445699999999766 68999999999999975
|
|
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.1e-24 Score=263.95 Aligned_cols=192 Identities=17% Similarity=0.213 Sum_probs=140.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HcC
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH---SQG 141 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH---s~g 141 (720)
.|..++.+++|||||++++ ++.+.. ..|+|||| .+++|.++++. +++..+..|+.||+.||+||| +.+
T Consensus 732 ~~~~~l~~l~HpnIv~~~~-~~~~~~---~~~lv~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~ 803 (968)
T PLN00113 732 SEIADMGKLQHPNIVKLIG-LCRSEK---GAYLIHEYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPA 803 (968)
T ss_pred HHHHHHhhCCCCCcceEEE-EEEcCC---CCEEEEeCCCCCcHHHHHhc----CCHHHHHHHHHHHHHHHHHhccCCCCC
Confidence 4577899999999999999 555443 46999999 89999999942 889999999999999999999 679
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++..++. |+..... .
T Consensus 804 iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~------------------------------------------~------- 833 (968)
T PLN00113 804 VVVGNLSPEKIIIDGKDEPHLR-LSLPGLL------------------------------------------C------- 833 (968)
T ss_pred eecCCCCHHhEEECCCCceEEE-ecccccc------------------------------------------c-------
Confidence 9999999999999988777763 3221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 834 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl 868 (968)
T PLN00113 834 ---------------------------------------------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLIL 868 (968)
T ss_pred ---------------------------------------------cCCCccccccccCcccccCCCCCcccchhhHHHHH
Confidence 00012578999999999988899999999999999
Q ss_pred hhccc---cCCCCch----HHHHHH-Hhhc----CCCCcccc-------ccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC---PFSTGEE----KTRTMS-SLRH----RVLPPQLL-------LKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~----~~~~~~-~l~~----~~~p~~~~-------~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||..... ...... .... ....+.+. .......+++.+||+.||++|||+.|+++
T Consensus 869 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~ 946 (968)
T PLN00113 869 IELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLK 946 (968)
T ss_pred HHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHH
Confidence 99999 5532211 100000 0000 01111111 11122348999999999999999999986
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.2e-24 Score=228.28 Aligned_cols=224 Identities=13% Similarity=0.127 Sum_probs=156.1
Q ss_pred CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCC-CCCcEEEEEec-CCCCHHHHHhCCCCC
Q 004998 40 RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEW-GDVSLRQWLDKPKRS 117 (720)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~-~~~~~~lv~E~-~ggsL~~~L~~~~~~ 117 (720)
-+.+.++++.+... +...|..|+++.-+-.+.|+||+++++ .-+.+. ....++||+|| ..|+|.+||..+.
T Consensus 231 L~~~~VAVKifp~~----~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~-~ekr~t~~~~eywLVt~fh~kGsL~dyL~~nt-- 303 (534)
T KOG3653|consen 231 LDNRLVAVKIFPEQ----EKQSFQNEKNIYSLPGMKHENILQFIG-AEKRGTADRMEYWLVTEFHPKGSLCDYLKANT-- 303 (534)
T ss_pred ccCceeEEEecCHH----HHHHHHhHHHHHhccCccchhHHHhhc-hhccCCccccceeEEeeeccCCcHHHHHHhcc--
Confidence 44455554433321 223455667777777899999999999 222221 23468999999 9999999996654
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH---------cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCccccccccccccc
Q 004998 118 VDVYECLHIFRQIVEIVYAAHS---------QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETK 188 (720)
Q Consensus 118 l~~~~~~~i~~QIl~aL~yLHs---------~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~ 188 (720)
+++.+..+|+..+++||+|||+ ..|+|||||..|||+..+++..|+|||++..+......
T Consensus 304 isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~----------- 372 (534)
T KOG3653|consen 304 ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQ----------- 372 (534)
T ss_pred ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCC-----------
Confidence 8999999999999999999995 57999999999999999999999999988543211000
Q ss_pred CCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccc
Q 004998 189 DLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQ 268 (720)
Q Consensus 189 ~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~ 268 (720)
+| .
T Consensus 373 -------------------~d----------------------------------------------------------~ 375 (534)
T KOG3653|consen 373 -------------------GD----------------------------------------------------------T 375 (534)
T ss_pred -------------------cc----------------------------------------------------------h
Confidence 00 0
Q ss_pred cccccCCcccCCccccCCC-C-----Cccccchhhhhhhhhccc---------------cCCC---Cch-HHHHHHHhhc
Q 004998 269 ILLMETNWYASPEELAGAP-V-----SCASDIYRLGVLLFELFC---------------PFST---GEE-KTRTMSSLRH 323 (720)
Q Consensus 269 ~~~~GT~~Y~APE~l~~~~-~-----s~~sDIwSLGvll~eLlt---------------pf~~---~~~-~~~~~~~l~~ 323 (720)
...+||..|||||++.+.. + -.+.||||+|.+||||++ ||.. ..+ ...+.....+
T Consensus 376 ~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~ 455 (534)
T KOG3653|consen 376 HGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVR 455 (534)
T ss_pred hhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHh
Confidence 1158999999999997764 2 247999999999999998 1221 011 1222222223
Q ss_pred CCCCccccccCc---h---HHHHHHHcCCCCCCCCCChHHH
Q 004998 324 RVLPPQLLLKFP---K---EASFCLWLLHPEPSGRPKMGEL 358 (720)
Q Consensus 324 ~~~p~~~~~~~p---~---~~~li~~~L~~dP~~Rpta~ei 358 (720)
....|.++..|- . ..+.+..||..||+.|.|+.=+
T Consensus 456 kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv 496 (534)
T KOG3653|consen 456 KKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCV 496 (534)
T ss_pred hccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHH
Confidence 333344433332 2 2388999999999999997544
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.1e-23 Score=229.99 Aligned_cols=207 Identities=18% Similarity=0.225 Sum_probs=160.3
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+.++...+|||||.||+.+...+ ..++.||| +||+|.+.- ....++++.++.++.+..+.||.|||++|=+|
T Consensus 61 qei~~~~dc~h~nivay~gsylr~d----klwicMEycgggslQdiy-~~TgplselqiayvcRetl~gl~ylhs~gk~h 135 (829)
T KOG0576|consen 61 QEIGMLRDCRHPNIVAYFGSYLRRD----KLWICMEYCGGGSLQDIY-HVTGPLSELQIAYVCRETLQGLKYLHSQGKIH 135 (829)
T ss_pred cceeeeecCCCcChHHHHhhhhhhc----CcEEEEEecCCCccccee-eecccchhHHHHHHHhhhhccchhhhcCCccc
Confidence 5666888899999999999443333 46999999 899999855 55566999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||-.|||+++.|.+|+.|||.+-+++..
T Consensus 136 RdiKGanilltd~gDvklaDfgvsaqitat-------------------------------------------------- 165 (829)
T KOG0576|consen 136 RDIKGANILLTDEGDVKLADFGVSAQITAT-------------------------------------------------- 165 (829)
T ss_pred ccccccceeecccCceeecccCchhhhhhh--------------------------------------------------
Confidence 999999999999999999999987433211
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CCCCCccccchhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVLL 301 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGvll 301 (720)
-.+.....|||+|||||+.. ...|...+|||++|+..
T Consensus 166 ----------------------------------------i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitA 205 (829)
T KOG0576|consen 166 ----------------------------------------IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITA 205 (829)
T ss_pred ----------------------------------------hhhhhcccCCccccchhHHHHHhcccccccccccccccch
Confidence 00112258999999999873 34499999999999998
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccc--cCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL--KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~--~~p~~~-~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.||-- |.....+....+..-..+.-||.+.. .|.... +|++.+|.++|++||+++.+|+|||+...
T Consensus 206 iel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~ 277 (829)
T KOG0576|consen 206 IELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT 277 (829)
T ss_pred hhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence 88876 43333333222222223444554433 444444 99999999999999999999999999987
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-23 Score=219.92 Aligned_cols=249 Identities=17% Similarity=0.213 Sum_probs=157.3
Q ss_pred eeeehhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
|...|..+|.. ..+.||+++.+ ++...+ .+.+|||| +..+..+++.. ++..+++.+++.++.||.++|.+
T Consensus 80 ri~~El~~L~~~gG~~ni~~~~~-~~rnnd---~v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h~~ 151 (418)
T KOG1167|consen 80 RILNELEMLYRLGGSDNIIKLNG-CFRNND---QVAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLHKN 151 (418)
T ss_pred HHHHHHHHHHHhccchhhhcchh-hhccCC---eeEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhhcc
Confidence 45566667777 45899999999 444433 68999999 88888888843 78999999999999999999999
Q ss_pred CceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 141 GIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|||||||||+|||.+ ..+.-.|+|||++.......-. .+ .+ +.-++.
T Consensus 152 GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~----~~-----------------s~-----~~~~~~------ 199 (418)
T KOG1167|consen 152 GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQT----EH-----------------SR-----SYSGRH------ 199 (418)
T ss_pred CccccCCCccccccccccCCceEEechhHHHHHhhhhh----hh-----------------hh-----hhhccc------
Confidence 999999999999998 5678899999998531111000 00 00 000000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcc--cCCCCccccccccCCcccCCccccCCC-CCccccchh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK--KQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYR 296 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~--~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwS 296 (720)
...+.|.. ....+... .+......+ ....+.......||++|+|||++...+ .++++||||
T Consensus 200 --------~~~~~g~~------~~~~~~~~--~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws 263 (418)
T KOG1167|consen 200 --------ATPAMGKD------VHCQSVAT--ASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWS 263 (418)
T ss_pred --------CCccccCc------cccccccc--ccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceee
Confidence 00000000 00000000 000000000 111222334578999999999998776 799999999
Q ss_pred hhhhhhhccc---cCCCCchHHHHHHHh---------h-----cCC--C-------------------------C-----
Q 004998 297 LGVLLFELFC---PFSTGEEKTRTMSSL---------R-----HRV--L-------------------------P----- 327 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l---------~-----~~~--~-------------------------p----- 327 (720)
.|||+.-+++ ||........+...+ + .+. + +
T Consensus 264 ~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n 343 (418)
T KOG1167|consen 264 AGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPN 343 (418)
T ss_pred ccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccc
Confidence 9999999998 764321110000000 0 000 0 0
Q ss_pred ---ccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 328 ---PQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 328 ---~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.......| ...+|+.+||+.||.+|.||+++|.||||...
T Consensus 344 ~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 344 TEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred eeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 00111122 23499999999999999999999999999954
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.8e-23 Score=198.61 Aligned_cols=159 Identities=16% Similarity=0.193 Sum_probs=126.8
Q ss_pred cccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHHc-Cceecc
Q 004998 71 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVHN 146 (720)
Q Consensus 71 Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs~-gIvHrD 146 (720)
......|.+|.+||..+..+ .+++.||....+|..+-+ +.+..++|..+-+|+..|+.||.|||++ .|||||
T Consensus 99 ~r~~~CPf~V~FyGa~~reg----dvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRD 174 (282)
T KOG0984|consen 99 MRTVDCPFTVHFYGALFREG----DVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRD 174 (282)
T ss_pred ccCCCCCeEEEeehhhhccc----cEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhcc
Confidence 44577999999999655444 479999998889987762 3456699999999999999999999985 899999
Q ss_pred CCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccc
Q 004998 147 VRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCM 226 (720)
Q Consensus 147 LKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~ 226 (720)
+||+||||+..|+||+||||.+-.. .|- .
T Consensus 175 vKPsNiLIn~~GqVKiCDFGIsG~L------------------------------------~dS-i-------------- 203 (282)
T KOG0984|consen 175 VKPSNILINYDGQVKICDFGISGYL------------------------------------VDS-I-------------- 203 (282)
T ss_pred CCcceEEEccCCcEEEcccccceee------------------------------------hhh-h--------------
Confidence 9999999999999999999987211 010 0
Q ss_pred cCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC----CCCccccchhhhhhhh
Q 004998 227 QSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----PVSCASDIYRLGVLLF 302 (720)
Q Consensus 227 q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~s~~sDIwSLGvll~ 302 (720)
++.. ..|...|||||.+... .|+-+|||||||++++
T Consensus 204 ------------------Akt~----------------------daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmi 243 (282)
T KOG0984|consen 204 ------------------AKTM----------------------DAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMI 243 (282)
T ss_pred ------------------HHHH----------------------hcCCCccCChhhcCcccCcccceeehhhhhhhhhhh
Confidence 0011 2467889999998543 4999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHR 324 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~ 324 (720)
||.+ ||+.+.......+.+...
T Consensus 244 ElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 244 EMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred hhhhccccccccCCHHHHHHHHhcC
Confidence 9998 888887777776666544
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.1e-22 Score=236.04 Aligned_cols=204 Identities=17% Similarity=0.210 Sum_probs=160.0
Q ss_pred ehhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHHHH
Q 004998 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFR 128 (720)
Q Consensus 66 ~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i~~ 128 (720)
.|..+|.. ..|||||.+++ ++.. ...+++++|| ..|+|.++|++.. ..++..+...+..
T Consensus 350 ~El~~m~~~g~H~niv~llG-~~t~---~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~ 425 (609)
T KOG0200|consen 350 SELNVLKELGKHPNIVNLLG-ACTQ---DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAY 425 (609)
T ss_pred HHHHHHHHhcCCcchhhhee-eecc---CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHH
Confidence 56666666 55999999999 4444 2368999999 9999999996554 2488999999999
Q ss_pred HHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccc
Q 004998 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
||+.|++||++..+|||||-..|||+..+..+|++|||++++.......
T Consensus 426 QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y------------------------------- 474 (609)
T KOG0200|consen 426 QIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYY------------------------------- 474 (609)
T ss_pred HHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCce-------------------------------
Confidence 9999999999999999999999999999999999998888653221000
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC
Q 004998 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 288 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 288 (720)
. ..+ ...+. ...|||||.+....|
T Consensus 475 --------------~-------------------------~~~--------~~~~L---------P~kWmApEsl~~~~f 498 (609)
T KOG0200|consen 475 --------------R-------------------------TKS--------SAGTL---------PVKWMAPESLFDRVF 498 (609)
T ss_pred --------------E-------------------------ecC--------CCCcc---------ceeecCHHHhccCcc
Confidence 0 000 00001 234999999999889
Q ss_pred Cccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 289 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 289 s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+.++||||+||+|||+++ ||++.......+..++.+...+......++..++++.||+.+|++||+..++.+
T Consensus 499 t~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~ 574 (609)
T KOG0200|consen 499 TSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE 574 (609)
T ss_pred cccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 999999999999999999 888755344556677777666655555555569999999999999999999874
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.88 E-value=1e-23 Score=227.34 Aligned_cols=183 Identities=28% Similarity=0.464 Sum_probs=154.4
Q ss_pred cEEEEEec-CCCCHHHHHh--CCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCC
Q 004998 95 PFVHAIEW-GDVSLRQWLD--KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 95 ~~~lv~E~-~ggsL~~~L~--~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~ 171 (720)
++||.|++ .-.+|.+||. ......+...++.++.|++.|++| +|.+|||+||.||++..+.++||.|||+....
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~ 406 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQ 406 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeec
Confidence 58999999 8889999994 344457888999999999999999 99999999999999998888998777665321
Q ss_pred CCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccc
Q 004998 172 GSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNR 251 (720)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g 251 (720)
.... +...++
T Consensus 407 ~~~~---------------------------------------------------~~~~~~------------------- 416 (516)
T KOG1033|consen 407 DKDE---------------------------------------------------TVAPAA------------------- 416 (516)
T ss_pred ccCC---------------------------------------------------cccchh-------------------
Confidence 1110 000000
Q ss_pred cchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccccCCCCchHHHHHHHhhcCCCCcccc
Q 004998 252 VNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLL 331 (720)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~ 331 (720)
...+..+||.|||+||++.+..|+.++||||||+|||||+.+|....+...++.+++++++||.+.
T Consensus 417 --------------a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r~g~ip~~~~ 482 (516)
T KOG1033|consen 417 --------------ASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIRDGIIPPEFL 482 (516)
T ss_pred --------------hhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhhcCCCChHHh
Confidence 012336899999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 332 LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 332 ~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
..+|.+.+|+.+||++.|.+||++.+.--|+|.
T Consensus 483 ~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 483 QDYPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred hcCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 999999999999999999999988777667664
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.2e-23 Score=228.70 Aligned_cols=201 Identities=15% Similarity=0.140 Sum_probs=159.3
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|+.+|++++|||+++|++ ++.... +.||++| ++|+|.++++.+...+-....+.|..||+.|+.|||.+++||
T Consensus 747 deAl~masldHpnl~RLLg-vc~~s~----~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVH 821 (1177)
T KOG1025|consen 747 DEALRMASLDHPNLLRLLG-VCMLST----LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVH 821 (1177)
T ss_pred HHHHHHhcCCCchHHHHhh-hcccch----HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhh
Confidence 7889999999999999999 554442 5789999 999999999777777999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||-..|||+...+++|+.|||+++....++.+..
T Consensus 822 rdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~--------------------------------------------- 856 (1177)
T KOG1025|consen 822 RDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYS--------------------------------------------- 856 (1177)
T ss_pred hhhhhhheeecCCCeEEEEecchhhccCccccccc---------------------------------------------
Confidence 99999999999999999999998865443322100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
++. . .-.+.|||-|.+....|+.++||||+||++|||
T Consensus 857 -----------------------~~~-----------g---------K~pikwmale~i~~~~~thqSDVWsfGVtiWEl 893 (1177)
T KOG1025|consen 857 -----------------------APG-----------G---------KVPIKWMALESIRIRKYTHQSDVWSFGVTIWEL 893 (1177)
T ss_pred -----------------------ccc-----------c---------ccCcHHHHHHHhhccCCCchhhhhhhhhhHHHH
Confidence 000 0 114568999999999999999999999999999
Q ss_pred cc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 305 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 305 lt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+| |+.+.... ++-..+..+..-+..+...-+..-++.+||..|+..||+++++..
T Consensus 894 mTFGa~Py~gi~~~-eI~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~ 952 (1177)
T KOG1025|consen 894 MTFGAKPYDGIPAE-EIPDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAE 952 (1177)
T ss_pred HhcCCCccCCCCHH-HhhHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHH
Confidence 99 77765443 334444444333333333334558999999999999999988864
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.6e-22 Score=194.92 Aligned_cols=175 Identities=27% Similarity=0.336 Sum_probs=144.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|...+..+.|++|+++++ .+... ...+++||+ .|++|.+++......++...++.++.+++.+|.+||+.|+
T Consensus 38 ~~~e~~~~~~l~~~~i~~~~~-~~~~~---~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 113 (215)
T cd00180 38 LLREIEILKKLNHPNIVKLYG-VFEDE---NHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGI 113 (215)
T ss_pred HHHHHHHHHhcCCCCeeeEee-eeecC---CeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 446677899999999999999 44333 367999999 7799999996543458999999999999999999999999
Q ss_pred eeccCCCCcEEEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 143 VVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 143 vHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
+|+||+|.||+++. .+.++|+|||.+........
T Consensus 114 ~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--------------------------------------------- 148 (215)
T cd00180 114 IHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--------------------------------------------- 148 (215)
T ss_pred eccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc---------------------------------------------
Confidence 99999999999998 89999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvl 300 (720)
......+...|++||.+... .++.++|+|+||++
T Consensus 149 ---------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~ 183 (215)
T cd00180 149 ---------------------------------------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVI 183 (215)
T ss_pred ---------------------------------------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHH
Confidence 00012457789999999887 68999999999999
Q ss_pred hhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCc
Q 004998 301 LFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSE 362 (720)
Q Consensus 301 l~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp 362 (720)
+++| +...+++.+||..+|++||++.+++.++
T Consensus 184 ~~~l------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 184 LYEL------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHH------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 9998 4456999999999999999999999875
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.2e-21 Score=198.55 Aligned_cols=202 Identities=21% Similarity=0.248 Sum_probs=155.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh-----C--CCCCCCHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD-----K--PKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~-----~--~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.|...|-.+.|||++.+.++..++... -++.+.+ +-|+|..||. + ..+.++..+...++.||+.|++||
T Consensus 336 ~es~lly~~sH~nll~V~~V~ie~~~~---P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hl 412 (563)
T KOG1024|consen 336 QESMLLYGASHPNLLSVLGVSIEDYAT---PFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHL 412 (563)
T ss_pred HHHHHHhcCcCCCccceeEEEeeccCc---ceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHH
Confidence 556667789999999999966665543 3677777 7889999995 2 234578888999999999999999
Q ss_pred HHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|++||||.||-..|.+|++.-+|||+|..++++.=. +|+-
T Consensus 413 h~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP----------------------------------~DYh------ 452 (563)
T KOG1024|consen 413 HNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFP----------------------------------GDYH------ 452 (563)
T ss_pred HhcCcccchhhhhcceehhheeEEeccchhccccCc----------------------------------cccc------
Confidence 999999999999999999999999999998876311 1220
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
| +.|. .--...||+||.+....|+.++|+|||
T Consensus 453 -------c---------------------LGDn--------------------EnRPvkWMslEal~n~~yssasDvWsf 484 (563)
T KOG1024|consen 453 -------C---------------------LGDN--------------------ENRPVKWMSLEALQNSHYSSASDVWSF 484 (563)
T ss_pred -------c---------------------cCCC--------------------CCCcccccCHHHHhhhhhcchhhhHHH
Confidence 0 0000 011346999999999999999999999
Q ss_pred hhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHc
Q 004998 298 GVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 298 Gvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||+||||+| |+...++. ++...+..+.. -..+..+|++. .++..||...|++||+.+|+.+
T Consensus 485 GVllWELmtlg~~PyaeIDPf-Em~~ylkdGyR-laQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~ 550 (563)
T KOG1024|consen 485 GVLLWELMTLGKLPYAEIDPF-EMEHYLKDGYR-LAQPFNCPDELFTVMACCWALLPEERPSFSQLVI 550 (563)
T ss_pred HHHHHHHHhcCCCCccccCHH-HHHHHHhccce-ecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence 999999999 66655543 34444444432 22334677776 9999999999999999999875
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.7e-21 Score=220.91 Aligned_cols=213 Identities=16% Similarity=0.227 Sum_probs=156.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|..+-+.+.||||+..+..+++... .+..||| .+ +|..++...+ .+...++..++.||+.||+|+|++||
T Consensus 368 i~sE~~i~~~l~h~~~~e~l~~~~~~~~----~~~~mE~~~~-Dlf~~~~~~~-~~~~~e~~c~fKqL~~Gv~y~h~~Gi 441 (601)
T KOG0590|consen 368 ITSEFCIGSSLSHPNIIETLDIVQEIDG----ILQSMEYCPY-DLFSLVMSNG-KLTPLEADCFFKQLLRGVKYLHSMGL 441 (601)
T ss_pred hhhheeecccccCCchhhhHHHHhhccc----chhhhhcccH-HHHHHHhccc-ccchhhhhHHHHHHHHHHHHHHhcCc
Confidence 3366667778999999988884443332 2334999 55 9999985543 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
.||||||+|+++...|.+|++|||.+..+-.+.-.
T Consensus 442 ahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~--------------------------------------------- 476 (601)
T KOG0590|consen 442 AHRDLKLENLLVTENGILKIIDFGAASVFRYPWEK--------------------------------------------- 476 (601)
T ss_pred eeccCccccEEEecCCceEEeecCcceeeccCcch---------------------------------------------
Confidence 99999999999999999999999998543221000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCc-cccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC-ASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~-~sDIwSLGvll 301 (720)
... .....+|+..|+|||++.+..|.+ ..||||.|+++
T Consensus 477 ----------------------~~~-------------------~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~ 515 (601)
T KOG0590|consen 477 ----------------------NIH-------------------ESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIY 515 (601)
T ss_pred ----------------------hhh-------------------hhcCcccCCcCcCcccccccccCcchhhhhhccceE
Confidence 000 011258899999999999999865 78999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhh---c---CCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLR---H---RVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~---~---~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+.|.+ ||.........+.... + ..-+..++...|... .+|-+||++||.+|.|+++|++.+||+...
T Consensus 516 ~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~ 592 (601)
T KOG0590|consen 516 ICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE 592 (601)
T ss_pred EEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence 99999 4432211111101111 1 111233444555554 899999999999999999999999999763
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.7e-20 Score=184.68 Aligned_cols=180 Identities=16% Similarity=0.206 Sum_probs=136.1
Q ss_pred CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEE
Q 004998 75 DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 153 (720)
Q Consensus 75 ~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NIL 153 (720)
.|.|||.-|++.|+..+ .++++||| +-|+|+.-+...+ +.+...+.++.|++.|++|+|+.++||||||.+|||
T Consensus 79 ~H~hIi~tY~vaFqt~d---~YvF~qE~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiL 153 (378)
T KOG1345|consen 79 PHQHIIDTYEVAFQTSD---AYVFVQEFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENIL 153 (378)
T ss_pred cchhhhHHHHHHhhcCc---eEEEeeccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEE
Confidence 49999999998887765 67899999 9999999775433 899999999999999999999999999999999999
Q ss_pred Ec--cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCc
Q 004998 154 MS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 231 (720)
Q Consensus 154 l~--~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~ 231 (720)
|- +..+|||||||.....|...-
T Consensus 154 if~~df~rvKlcDFG~t~k~g~tV~------------------------------------------------------- 178 (378)
T KOG1345|consen 154 IFDADFYRVKLCDFGLTRKVGTTVK------------------------------------------------------- 178 (378)
T ss_pred EecCCccEEEeeecccccccCceeh-------------------------------------------------------
Confidence 96 445789988887743322100
Q ss_pred cccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-----CCccccchhhhhhhhhccc
Q 004998 232 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-----VSCASDIYRLGVLLFELFC 306 (720)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-----~s~~sDIwSLGvll~eLlt 306 (720)
..-.+..|.+||++.... ..+.+|||.||+++|.+|+
T Consensus 179 --------------------------------------~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~clt 220 (378)
T KOG1345|consen 179 --------------------------------------YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLT 220 (378)
T ss_pred --------------------------------------hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeec
Confidence 011255689999874332 6889999999999999999
Q ss_pred cCCCCc------hHHHHHHHhh---cCCCCccccccCchHHHHHHHcCCCCCCCC
Q 004998 307 PFSTGE------EKTRTMSSLR---HRVLPPQLLLKFPKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 307 pf~~~~------~~~~~~~~l~---~~~~p~~~~~~~p~~~~li~~~L~~dP~~R 352 (720)
+-.++. .....+.... ...+|..+....+....+.++-|.++|++|
T Consensus 221 G~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~dr 275 (378)
T KOG1345|consen 221 GKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDR 275 (378)
T ss_pred CCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCccccc
Confidence 433331 1112222222 234566666677788899999999999999
|
|
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.79 E-value=3.8e-19 Score=184.65 Aligned_cols=227 Identities=17% Similarity=0.203 Sum_probs=150.2
Q ss_pred CccccccccccCCCCccceeee-ehhhhcccCCCCCceecccceeecCC------------------------CCCcEEE
Q 004998 44 LLRGERFGVRGDDSNDFELRKH-SDGVELTHGDHLRNQGGLSGVCENEA------------------------AIDPFVH 98 (720)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~r~~-~e~~~Ls~l~HpnIV~l~~~~~~~~~------------------------~~~~~~l 98 (720)
.+|+.+....+++ +...||.- +..+.|. .|||||+++..|+. .. +...+|+
T Consensus 245 lvPa~~~a~~~e~-~~~t~R~l~nqtvhLa--~HPNIvri~~aF~d-sv~~lPda~~~YPdalp~R~~p~g~g~~~tlyl 320 (598)
T KOG4158|consen 245 LVPAPNAAKLLEG-QMGTFRPLPNQTVHLA--KHPNIVRIQTAFID-SVKVLPDAIERYPDALPARWYPSGAGEPKTLYL 320 (598)
T ss_pred ccCcchhhhhccc-ccceeeeCCCCCcccC--CCCCEEeehhhhhh-hhccCCchhhhCcccccceecccccCCCceEEE
Confidence 3344433333333 34445544 4444454 59999999995442 21 1123799
Q ss_pred EEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEc--cCC--ceEEeccCcccCCCCC
Q 004998 99 AIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS--SFN--HVSFIESASCSDSGSD 174 (720)
Q Consensus 99 v~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~--~~~--~vkliDfg~a~~~g~~ 174 (720)
||.-...+|+++|.... .+......|+.|+++|+.|||.+||.|||||.+|||+. +++ .+.+.|||+|-.-..-
T Consensus 321 vMkrY~~tLr~yl~~~~--~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~h 398 (598)
T KOG4158|consen 321 VMKRYRQTLREYLWTRH--RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNH 398 (598)
T ss_pred ehhcchhhHHHHHhcCC--CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeecccc
Confidence 99987789999995544 67888899999999999999999999999999999995 333 4788888888221100
Q ss_pred CcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccch
Q 004998 175 SHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNV 254 (720)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~ 254 (720)
|...+. .....|.
T Consensus 399 ----------------------------------------------------------Glqlpy-----~S~~Vd~---- 411 (598)
T KOG4158|consen 399 ----------------------------------------------------------GLQLPY-----ESDEVDL---- 411 (598)
T ss_pred ----------------------------------------------------------cccccc-----ccccccC----
Confidence 000000 0111222
Q ss_pred hhhhcccCCCCccccccccCCcccCCccccCCC------CCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCC
Q 004998 255 EQVEEKKQPFPMKQILLMETNWYASPEELAGAP------VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV 325 (720)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~ 325 (720)
-|...-||||+....+ --.++|.|+.|.+.||+++ ||....+..-.....++..
T Consensus 412 -----------------GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~q 474 (598)
T KOG4158|consen 412 -----------------GGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQ 474 (598)
T ss_pred -----------------CCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhh
Confidence 3677889999986544 1247899999999999998 8887433222222244445
Q ss_pred CCccccccCchHHHHHHHcCCCCCCCCCCh---HHHHc
Q 004998 326 LPPQLLLKFPKEASFCLWLLHPEPSGRPKM---GELLQ 360 (720)
Q Consensus 326 ~p~~~~~~~p~~~~li~~~L~~dP~~Rpta---~eiL~ 360 (720)
+|+-.....|...+++..+|++||++|++. +-+|+
T Consensus 475 LPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 475 LPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred CCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHHH
Confidence 555444444555699999999999999874 44554
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.79 E-value=6.1e-19 Score=177.82 Aligned_cols=169 Identities=25% Similarity=0.290 Sum_probs=131.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
...|...+.+++|+||+++++ .+... ...++++|+ .+++|.+++......+++..+..++.|++.+|.+||++|+
T Consensus 44 ~~~e~~~~~~~~~~~i~~~~~-~~~~~---~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i 119 (225)
T smart00221 44 FLREIRILKKLKHPNIVKLYG-VFEDP---EPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGI 119 (225)
T ss_pred HHHHHHHHHhCCCCChhhhee-eeecC---CceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 335666888899999999999 44433 257999999 7779999995443338999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||+|.||+++.++.++|+|||.+....... .+
T Consensus 120 ~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~--------------------------------~~------------- 154 (225)
T smart00221 120 VHRDLKPENILLGMDGLVKLADFGLARFIHRDL--------------------------------AA------------- 154 (225)
T ss_pred ecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc--------------------------------cc-------------
Confidence 999999999999999999999998874321110 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccc-cCCCCCccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL-AGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l-~~~~~s~~sDIwSLGvll 301 (720)
......++..|++||.+ ....++.++|||+||+++
T Consensus 155 --------------------------------------------~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~ 190 (225)
T smart00221 155 --------------------------------------------LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVIL 190 (225)
T ss_pred --------------------------------------------cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHH
Confidence 00013567889999998 555688899999999999
Q ss_pred hhccc---cCCC-CchHHHHHHHhhcCC
Q 004998 302 FELFC---PFST-GEEKTRTMSSLRHRV 325 (720)
Q Consensus 302 ~eLlt---pf~~-~~~~~~~~~~l~~~~ 325 (720)
|+|++ ||.. .+....++..+..+.
T Consensus 191 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 218 (225)
T smart00221 191 YELLWGPEPFSGEGEFTSLLSDVWSFGV 218 (225)
T ss_pred HHHHHCCCCccccchhHHHHHHHHhcCC
Confidence 99999 6755 344445666666554
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.71 E-value=6.4e-17 Score=169.89 Aligned_cols=217 Identities=23% Similarity=0.280 Sum_probs=159.3
Q ss_pred eeeehhhhcccCCCC-CceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHL-RNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~Hp-nIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
...+|..+++.+.|+ +|+++++ .+.... ..++++++ .+++|.+++.... ..++...+..++.|++.++.|+|
T Consensus 43 ~~~~e~~~~~~~~~~~~i~~~~~-~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H 118 (384)
T COG0515 43 RFLREIQILASLNHPPNIVKLYD-FFQDEG---SLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118 (384)
T ss_pred HHHHHHHHHHHccCCcceeeEEE-EEecCC---EEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 444667789999999 7999999 443332 37999999 9999998775543 25999999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCC-ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+.|++|||+||+||+++..+ .++++|||.+......... .
T Consensus 119 ~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~--------------------------------~------- 159 (384)
T COG0515 119 SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST--------------------------------S------- 159 (384)
T ss_pred hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc--------------------------------c-------
Confidence 99999999999999999888 7999999987432111000 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC---CCCCccccc
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDI 294 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDI 294 (720)
..........||.+|+|||.+.+ ..+....|+
T Consensus 160 ---------------------------------------------~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~ 194 (384)
T COG0515 160 ---------------------------------------------SIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDI 194 (384)
T ss_pred ---------------------------------------------cccccccccccccccCCHHHhcCCCCCCCCchHhH
Confidence 00000112578999999999988 568999999
Q ss_pred hhhhhhhhhccc---cCCCCch---HHHHHHHhhcCCCC---ccccccC-----chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 295 YRLGVLLFELFC---PFSTGEE---KTRTMSSLRHRVLP---PQLLLKF-----PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~---~~~~~~~l~~~~~p---~~~~~~~-----p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|++++++++ ||..... .......+.....+ ....... ....+++..++..+|..|.+..+...
T Consensus 195 ~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 195 WSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred HHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 999999999888 5554442 33444444443322 1222221 24459999999999999999999888
Q ss_pred CcccCCC
Q 004998 361 SEFLNEP 367 (720)
Q Consensus 361 hp~~~~~ 367 (720)
+++....
T Consensus 275 ~~~~~~~ 281 (384)
T COG0515 275 HDLLAHL 281 (384)
T ss_pred chHhhCc
Confidence 7665554
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.8e-18 Score=188.91 Aligned_cols=213 Identities=17% Similarity=0.208 Sum_probs=161.8
Q ss_pred eeeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+...|..++...+ ||.+|++.. .++.+. ..++++++ .|+.|...+.+. ..+.+.....+...++-+++++|+.
T Consensus 42 ~t~~er~il~~~~~~~f~v~lhy-afqt~~---kl~l~ld~~rgg~lft~l~~~-~~f~~~~~~~~~aelaLald~lh~l 116 (612)
T KOG0603|consen 42 HTKQERIILAFVHNTPFLVKLHY-AFQTDG---KLYLILDFLRGGDLFTRLSKE-VMFDELDVAFYLAELALALDHLHKL 116 (612)
T ss_pred ccccHHHHHhhccCCCceeeeee-eecccc---chhHhhhhcccchhhhccccC-CchHHHHHHHHHHHHHHHHhhcchh
Confidence 5556777888877 999999998 455544 46899999 888999888444 3488999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+|||+|++||+++.+|++++.|||..+..-
T Consensus 117 ~iiyrd~k~enilld~~Ghi~~tdfglske~v------------------------------------------------ 148 (612)
T KOG0603|consen 117 GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAV------------------------------------------------ 148 (612)
T ss_pred HHHHhcccccceeecccCccccCCchhhhHhH------------------------------------------------
Confidence 99999999999999999999998777663210
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
+. ...+||..|||||+++ ....++|.||+|++
T Consensus 149 -------------------------------------~~---------~~~cgt~eymApEI~~--gh~~a~D~ws~gvl 180 (612)
T KOG0603|consen 149 -------------------------------------KE---------KIACGTYEYRAPEIIN--GHLSAADWWSFGVL 180 (612)
T ss_pred -------------------------------------hh---------hhcccchhhhhhHhhh--ccCCcccchhhhhh
Confidence 00 0127899999999998 56899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC-ccch
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP-RDSM 371 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~-~~~l 371 (720)
+|||++ ||.+ ..+..|....++ .....++...+++..++..+|..|. -+.|+++|+||... +..+
T Consensus 181 ~felltg~~pf~~-----~~~~~Il~~~~~-~p~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~l 254 (612)
T KOG0603|consen 181 AFELLTGTLPFGG-----DTMKRILKAELE-MPRELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNEL 254 (612)
T ss_pred HHHHhhCCCCCch-----HHHHHHhhhccC-CchhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhhH
Confidence 999999 6665 344444332111 1112234445899999999999995 46899999999987 4445
Q ss_pred HHHHHHHHHhh
Q 004998 372 EEREAAIELRE 382 (720)
Q Consensus 372 ~e~~~~~~~~e 382 (720)
..+....++..
T Consensus 255 ~~r~~~~~fkp 265 (612)
T KOG0603|consen 255 EARSRPPPFKP 265 (612)
T ss_pred hhcCCCCCCCC
Confidence 55555444444
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.67 E-value=1e-17 Score=192.50 Aligned_cols=202 Identities=19% Similarity=0.200 Sum_probs=141.0
Q ss_pred cccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCC
Q 004998 71 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 150 (720)
Q Consensus 71 Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~ 150 (720)
..-++|||.+++-- +..... ..|+|-+|--.+|.|.|..+ .-+...+.+-|+.||+.||.-+|..||+|+|||.+
T Consensus 75 ~~l~~~pn~lPfqk-~~~t~k---AAylvRqyvkhnLyDRlSTR-PFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsE 149 (1431)
T KOG1240|consen 75 FALMKAPNCLPFQK-VLVTDK---AAYLVRQYVKHNLYDRLSTR-PFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSE 149 (1431)
T ss_pred HHhhcCCcccchHH-HHHhhH---HHHHHHHHHhhhhhhhhccc-hHHHHHHHHHHHHHHHHHHHHHHHcCccccccccc
Confidence 55678999999877 443443 34888899777999999332 33788999999999999999999999999999999
Q ss_pred cEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCC
Q 004998 151 CFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 230 (720)
Q Consensus 151 NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~ 230 (720)
||||++-+.+.|.||..-+..=.+ +|- -+||+.-.
T Consensus 150 NILiTSWNW~~LtDFAsFKPtYLP---------------------eDN--------Padf~fFF---------------- 184 (1431)
T KOG1240|consen 150 NILITSWNWLYLTDFASFKPTYLP---------------------EDN--------PADFTFFF---------------- 184 (1431)
T ss_pred eEEEeeechhhhhcccccCCccCC---------------------CCC--------cccceEEE----------------
Confidence 999999999999999754221000 000 04553211
Q ss_pred ccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC----------C-CCccccchhhhh
Q 004998 231 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----------P-VSCASDIYRLGV 299 (720)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----------~-~s~~sDIwSLGv 299 (720)
|.. ---..|+|||-+... + .+++.||||+||
T Consensus 185 ------------------DTS--------------------rRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GC 226 (1431)
T KOG1240|consen 185 ------------------DTS--------------------RRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGC 226 (1431)
T ss_pred ------------------ecC--------------------CceeeecChHhhhccccccccCCcccccChhhhhhhhhH
Confidence 111 012359999988541 1 578999999999
Q ss_pred hhhhccc-cCCCCchHHHHHHHhhc-CCCCccccccCc--hHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 300 LLFELFC-PFSTGEEKTRTMSSLRH-RVLPPQLLLKFP--KEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 300 ll~eLlt-pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p--~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
+++||++ +-+.++ ..+....-++ ...+...+..++ ....|+..|++.||++|.+|++.|+.
T Consensus 227 ViaELf~Eg~PlF~-LSQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 227 VIAELFLEGRPLFT-LSQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHHHhcCCCccc-HHHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 9999999 222221 1222222222 223333333333 34589999999999999999999984
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.4e-16 Score=183.35 Aligned_cols=164 Identities=18% Similarity=0.241 Sum_probs=118.5
Q ss_pred HHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccc
Q 004998 131 VEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 131 l~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
+.+++|||+-||+|||+||+|.+|+.-|++|+.|||+.+........
T Consensus 153 vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~at--------------------------------- 199 (1205)
T KOG0606|consen 153 VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLAT--------------------------------- 199 (1205)
T ss_pred hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccc---------------------------------
Confidence 78999999999999999999999999999999999887442211000
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCc
Q 004998 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC 290 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~ 290 (720)
++..-.+.+...+- .....+|||.|+|||++....|+.
T Consensus 200 -----------------------------------nl~eg~I~k~t~Ef-------~dKqvcgTPeyiaPeVilrqgygk 237 (1205)
T KOG0606|consen 200 -----------------------------------NLKEGHIEKDTHEF-------QDKQVCGTPEYIAPEVILRQGYGK 237 (1205)
T ss_pred -----------------------------------hhhhcchHHHHHHh-------hhccccCCccccChhhhhhhccCC
Confidence 00000000000000 011258999999999999999999
Q ss_pred cccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCC-CCccccccCchHHHHHHHcCCCCCCCCC---ChHHHHcCcc
Q 004998 291 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRP---KMGELLQSEF 363 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~-~p~~~~~~~p~~~~li~~~L~~dP~~Rp---ta~eiL~hp~ 363 (720)
.+|+|++|+|+||.+. ||++..+..-.-..+...+ .|..-....++.+++|..+|+.+|..|. .+-++.+|+|
T Consensus 238 pvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~f 317 (1205)
T KOG0606|consen 238 PVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGF 317 (1205)
T ss_pred CccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccc
Confidence 9999999999999987 8888766543334444433 3444333445556999999999999994 6788899999
Q ss_pred cCCCcc
Q 004998 364 LNEPRD 369 (720)
Q Consensus 364 ~~~~~~ 369 (720)
|.....
T Consensus 318 f~~LDw 323 (1205)
T KOG0606|consen 318 FQLLDW 323 (1205)
T ss_pred eeeccc
Confidence 998844
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.60 E-value=2.3e-15 Score=156.84 Aligned_cols=125 Identities=10% Similarity=0.128 Sum_probs=107.1
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCC
Q 004998 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~ 658 (720)
.+.+.+.|...+.+-+..| .+|...|.+|+|+|+|..+||||.|.++||||++.. .++..|. |.+-
T Consensus 323 lD~~~RvWDlRtgr~im~L-----~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r--------~~ly~ipAH~nl 389 (459)
T KOG0272|consen 323 LDSLGRVWDLRTGRCIMFL-----AGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMR--------SELYTIPAHSNL 389 (459)
T ss_pred ccchhheeecccCcEEEEe-----cccccceeeEeECCCceEEeecCCCCcEEEeeeccc--------ccceecccccch
Confidence 3445566777666666666 456999999999999999999999999999999876 2455664 4778
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 659 i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|+.|+|+|..+.+|+|||||++|+||.-.+.+++++ |.|++.++.+..|.+++||---.
T Consensus 390 VS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~K 455 (459)
T KOG0272|consen 390 VSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIK 455 (459)
T ss_pred hhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceee
Confidence 999999998889999999999999999999999987 99999999999999999996543
|
|
| >KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.60 E-value=6.3e-16 Score=155.58 Aligned_cols=112 Identities=15% Similarity=0.231 Sum_probs=97.3
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceE--EecCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV--EMASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
+..+.|.|..|+|||+||+|||+||-|.|||+.++ ....|+.|... .|.+...|.|++||.+ ..+||||+.||.||
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~G-KlrKDLkYQAqd~fMMmd~aVlci~FSRD-sEMlAsGsqDGkIK 288 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTG-KLRKDLKYQAQDNFMMMDDAVLCISFSRD-SEMLASGSQDGKIK 288 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccc-hhhhhhhhhhhcceeecccceEEEeeccc-HHHhhccCcCCcEE
Confidence 34577999999999999999999999999999887 23345556553 5677889999999995 56999999999999
Q ss_pred EEECCCCcEEEE--------EEEEeecCCceEEEecCccceEEc
Q 004998 683 VGQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 683 lWDv~tg~~~~~--------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
||-+.||+|++. |.|+.|+++++.+.+++||.+..+
T Consensus 289 vWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRi 332 (508)
T KOG0275|consen 289 VWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRI 332 (508)
T ss_pred EEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEE
Confidence 999999999985 999999999999999999997653
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.2e-15 Score=152.98 Aligned_cols=118 Identities=11% Similarity=0.175 Sum_probs=97.6
Q ss_pred ccccceEEeeeec-cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEE
Q 004998 587 LSFSKLRVKADLN-QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICW 664 (720)
Q Consensus 587 ~~~~~~~~~~~l~-~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~ 664 (720)
..---|||.+..+ ...+.||...|-|++|+|+|..|||||.|.|+|+||+.+. .|...+ .|.+.|.||+|
T Consensus 94 qpqavfrvrpvtrCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~Te--------Tp~~t~KgH~~WVlcvaw 165 (480)
T KOG0271|consen 94 QPQAVFRVRPVTRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTE--------TPLFTCKGHKNWVLCVAW 165 (480)
T ss_pred ccchhhcccccceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCC--------CcceeecCCccEEEEEEE
Confidence 3344567777777 6789999999999999999999999999999999999876 366555 45889999999
Q ss_pred ecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------EEEEeecC-----CceEEEecCcc
Q 004998 665 NSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------LYCIVLNK-----LLIIFRYGMFQ 713 (720)
Q Consensus 665 ~~~~~~~laS~s~D~~v~lWDv~tg~~~~~--------v~~v~~~~-----~~~~~~~~~~~ 713 (720)
+|++ ..||||+.||+|++||..+|+++.. |.+++|.| .+-.++++|=|
T Consensus 166 sPDg-k~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skD 226 (480)
T KOG0271|consen 166 SPDG-KKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKD 226 (480)
T ss_pred CCCc-chhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCC
Confidence 9975 5999999999999999999998865 88888854 44455555544
|
|
| >KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.57 E-value=7.5e-15 Score=151.15 Aligned_cols=109 Identities=16% Similarity=0.177 Sum_probs=93.7
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
.+.+|...|+.|.|+||+.|+||||.|+.||+||.+++. +--..-+|=..|+.|+|+.+. .+|+|||.|.|+
T Consensus 362 rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk-------~lasfRGHv~~VYqvawsaDs-RLlVS~SkDsTL 433 (480)
T KOG0271|consen 362 RMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGK-------FLASFRGHVAAVYQVAWSADS-RLLVSGSKDSTL 433 (480)
T ss_pred hhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcc-------hhhhhhhccceeEEEEeccCc-cEEEEcCCCceE
Confidence 456789999999999999999999999999999988872 111122345689999999964 599999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEEc
Q 004998 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 682 ~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
|||||+|.+..+. |++|+|+|+|.-..+|=-|+|..|
T Consensus 434 Kvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~l 477 (480)
T KOG0271|consen 434 KVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRL 477 (480)
T ss_pred EEEEeeeeeecccCCCCCceEEEEEecCCCceeecCCCceEEEe
Confidence 9999999887765 999999999999999999998765
|
|
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.9e-15 Score=161.22 Aligned_cols=93 Identities=16% Similarity=0.132 Sum_probs=75.7
Q ss_pred eeeehhhhcccCCCCCcee-cccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQG-GLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~-l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++|+||+. +++ .+ ..|+|||| .|++|.. + .. .. ...++.|++.+|.|||++
T Consensus 67 ~~~~E~~iL~~L~h~~iv~~l~~----~~----~~~LVmE~~~G~~L~~-~-~~---~~---~~~~~~~i~~aL~~lH~~ 130 (365)
T PRK09188 67 LAAREIRALKTVRGIGVVPQLLA----TG----KDGLVRGWTEGVPLHL-A-RP---HG---DPAWFRSAHRALRDLHRA 130 (365)
T ss_pred HHHHHHHHHHhccCCCCCcEEEE----cC----CcEEEEEccCCCCHHH-h-Cc---cc---hHHHHHHHHHHHHHHHHC
Confidence 3458888999999999985 443 11 36999999 8899973 2 11 11 146889999999999999
Q ss_pred CceeccC-CCCcEEEccCCceEEeccCcccCC
Q 004998 141 GIVVHNV-RPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 141 gIvHrDL-KP~NILl~~~~~vkliDfg~a~~~ 171 (720)
||+|||| ||+|||++.++.++|+|||+++.+
T Consensus 131 gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~ 162 (365)
T PRK09188 131 GITHNDLAKPQNWLMGPDGEAAVIDFQLASVF 162 (365)
T ss_pred CCeeCCCCCcceEEEcCCCCEEEEECccceec
Confidence 9999999 999999998999999999998654
|
|
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.7e-14 Score=143.55 Aligned_cols=112 Identities=15% Similarity=0.197 Sum_probs=92.2
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCC-CCEEEEEeCCC
Q 004998 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI-KSQIASSNFEG 679 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~-~~~laS~s~D~ 679 (720)
..|.||+..|.||+|++|...|+|||.|+||++||.-... .|.+.+..+++.|+||+|+|.. ..+|+|+|.|+
T Consensus 99 ~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~c------k~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~Dk 172 (315)
T KOG0279|consen 99 RRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVC------KYTIHEDSHREWVSCVRFSPNESNPIIVSASWDK 172 (315)
T ss_pred EEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccE------EEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCc
Confidence 3467889999999999999999999999999999965431 1223333337889999999974 56999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEEc
Q 004998 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
+|||||+++-+...+ ++.|++||+|++..||==|-..+|
T Consensus 173 tvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~L 218 (315)
T KOG0279|consen 173 TVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAML 218 (315)
T ss_pred eEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEE
Confidence 999999998876655 899999999999999976655554
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.55 E-value=5.6e-14 Score=151.46 Aligned_cols=213 Identities=16% Similarity=0.097 Sum_probs=140.4
Q ss_pred eeeehhhhcccCCC----CCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDH----LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 63 r~~~e~~~Ls~l~H----pnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
+...|..+|..+.. +++..+++... .....-|+||+..|.+|.++.+.. .+.++...+..|+.|++.+|.+|
T Consensus 62 ~l~~E~~vl~~l~~~~~~~~~~~~~~~G~---~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~l 138 (322)
T KOG1164|consen 62 VLKIEIQVLKKLEKKNGPSHFPKLLDHGR---STEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDL 138 (322)
T ss_pred cchhHHHHHHHHhhhcCCCCCCEEEEecc---CCCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHH
Confidence 33456667777653 57777777221 233367999999999999987433 36799999999999999999999
Q ss_pred HHcCceeccCCCCcEEEccC-----CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccc
Q 004998 138 HSQGIVVHNVRPSCFVMSSF-----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~-----~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
|+.|++||||||+|+++... ..+.++|||+++.+... .+.|-
T Consensus 139 H~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~---------------------------------~~~~~ 185 (322)
T KOG1164|consen 139 HSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYV---------------------------------GDSGG 185 (322)
T ss_pred HhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCcccccc---------------------------------CCCCc
Confidence 99999999999999999854 46899999998632110 00000
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcc--ccccccCCcccCCccccCCCCCc
Q 004998 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMK--QILLMETNWYASPEELAGAPVSC 290 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~--~~~~~GT~~Y~APE~l~~~~~s~ 290 (720)
. ..+.+ .....||..|+++....+...+.
T Consensus 186 ~-------------------------------------------------~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r 216 (322)
T KOG1164|consen 186 N-------------------------------------------------LRPPRPQKGLFRGTLRYASINVHLGIEQGR 216 (322)
T ss_pred c-------------------------------------------------cccCCCCccCCCCccccccHHHhCCCccCC
Confidence 0 00000 01246999999999999999999
Q ss_pred cccchhhhhhhhhccc---cCCCCchH--HHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHc
Q 004998 291 ASDIYRLGVLLFELFC---PFSTGEEK--TRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~--~~~~~~l~~~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+.|+||++-++.||+. ||...... ...+...........+....|.+. .+...+-..+...+|....+..
T Consensus 217 ~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~ 292 (322)
T KOG1164|consen 217 RDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE 292 (322)
T ss_pred chhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence 9999999999999997 55443321 111222221111111222233333 4555555567777776655543
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.4e-15 Score=146.50 Aligned_cols=195 Identities=16% Similarity=0.126 Sum_probs=144.5
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcC-c
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQG-I 142 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~g-I 142 (720)
.|.-.|.-+.||||+.+++ .|.... ...++..| +-++|...|... +-.++..++..++.+|+.|+.|||+.. +
T Consensus 236 eefp~lrifshpnilpvlg-acnspp---nlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ 311 (448)
T KOG0195|consen 236 EEFPALRIFSHPNILPVLG-ACNSPP---NLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPM 311 (448)
T ss_pred hhCcceeeecCCchhhhhh-hccCCC---CceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchh
Confidence 4444567788999999999 555554 45777788 888999999433 334678899999999999999999853 3
Q ss_pred -eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 143 -VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 143 -vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
----|....++|+++-+.+|.= + .+-|.+
T Consensus 312 ipr~~lns~hvmidedltarism---a--------------------------------------d~kfsf--------- 341 (448)
T KOG0195|consen 312 IPRFYLNSKHVMIDEDLTARISM---A--------------------------------------DTKFSF--------- 341 (448)
T ss_pred hhhhhcccceEEecchhhhheec---c--------------------------------------cceeee---------
Confidence 3345777788888777666520 0 011100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC---Cccccchhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV---SCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~---s~~sDIwSLG 298 (720)
+..-..-.|.||+||.+...+- -.++|+|||.
T Consensus 342 ---------------------------------------------qe~gr~y~pawmspealqrkped~n~raadmwsfa 376 (448)
T KOG0195|consen 342 ---------------------------------------------QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFA 376 (448)
T ss_pred ---------------------------------------------eccccccCcccCCHHHHhcCchhcchhhhhHHHHH
Confidence 0001234788999999987763 4589999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHH
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL 359 (720)
+++|||-| ||....+...-|+....+..+...+...+....|+.-|+..||.+||..+.|+
T Consensus 377 illwel~trevpfadlspmecgmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 377 ILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred HHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 99999999 99988887777777766655555555667778999999999999999987764
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.6e-14 Score=158.00 Aligned_cols=113 Identities=15% Similarity=0.113 Sum_probs=94.7
Q ss_pred CCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+|+|+| |+.+|||||.|++|+|||+..... ......|+..+. |..+|.+|+|+|...++||||+.|++
T Consensus 71 l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~-~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt 149 (493)
T PTZ00421 71 LLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGL-TQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV 149 (493)
T ss_pred EeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCcc-ccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence 567899999999999 899999999999999999865311 011223555554 57789999999977789999999999
Q ss_pred EEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 681 VQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+|||+.+++.+.+ |++++|++.+..+++|+.|..-
T Consensus 150 VrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~I 192 (493)
T PTZ00421 150 VNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKL 192 (493)
T ss_pred EEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEE
Confidence 99999999988765 8999999999999999998654
|
|
| >KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.3e-15 Score=154.17 Aligned_cols=124 Identities=12% Similarity=0.145 Sum_probs=103.3
Q ss_pred chhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC
Q 004998 578 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS 657 (720)
Q Consensus 578 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 657 (720)
+-.++..+.|.++.=.+++ +|.||...|..|+|+|+|+||+|||.|.+-|+||+.+.... +..-+|..
T Consensus 237 ~s~Dgtvklw~~~~e~~l~-----~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~El-------L~QEGHs~ 304 (459)
T KOG0272|consen 237 ASADGTVKLWKLSQETPLQ-----DLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSEL-------LLQEGHSK 304 (459)
T ss_pred eccCCceeeeccCCCcchh-----hhhcchhhheeeeecCCCceeeecccccchhhcccccchhh-------Hhhccccc
Confidence 3445577777777655554 55667999999999999999999999999999999887321 12234466
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004998 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 658 ~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
.|.+|+|+|+ +.+++||+.|..-+|||++||.||+. |++|+|+|-|-.+++|+-|-
T Consensus 305 ~v~~iaf~~D-GSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dn 367 (459)
T KOG0272|consen 305 GVFSIAFQPD-GSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDN 367 (459)
T ss_pred ccceeEecCC-CceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCC
Confidence 7999999995 57999999999999999999999986 99999999999999999874
|
|
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.54 E-value=5.1e-14 Score=158.69 Aligned_cols=108 Identities=10% Similarity=0.123 Sum_probs=93.7
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
.+.+|...|++|+|+|||+++++|+.|++|||||..... .+..+..+|...|+|++|+|.+ +.|+||++|++|
T Consensus 198 ~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~------~~~~~l~gH~~~v~~~~f~p~g-~~i~Sgs~D~tv 270 (456)
T KOG0266|consen 198 ELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDG------RNLKTLKGHSTYVTSVAFSPDG-NLLVSGSDDGTV 270 (456)
T ss_pred cccccccceeeeEECCCCcEEEEecCCceEEEeeccCCC------eEEEEecCCCCceEEEEecCCC-CEEEEecCCCcE
Confidence 447789999999999999999999999999999983221 1223445778899999999976 899999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 682 ~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+|||+++|+++.. |.+++|++.+..+.+++.|..-
T Consensus 271 riWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i 312 (456)
T KOG0266|consen 271 RIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTI 312 (456)
T ss_pred EEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccE
Confidence 9999999999886 8999999999999999988654
|
|
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.53 E-value=5.8e-15 Score=149.27 Aligned_cols=96 Identities=14% Similarity=0.111 Sum_probs=76.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCC----CCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAA----IDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~----~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.++|+..+.++.||+|..+.+.+...... ....+++||| .|.+|.++.. +++ ....+|+.+|..+|
T Consensus 82 ~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH 152 (232)
T PRK10359 82 YENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLH 152 (232)
T ss_pred HHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHH
Confidence 35777789999999999998833322211 2357999999 9999998741 333 34669999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCccc
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCS 169 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~ 169 (720)
..|++|||+||+||+++++| ++++|||...
T Consensus 153 ~~gi~H~Dikp~Nili~~~g-i~liDfg~~~ 182 (232)
T PRK10359 153 QHGMVSGDPHKGNFIVSKNG-LRIIDLSGKR 182 (232)
T ss_pred HcCCccCCCChHHEEEeCCC-EEEEECCCcc
Confidence 99999999999999999888 9999998763
|
|
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.4e-14 Score=148.40 Aligned_cols=109 Identities=15% Similarity=0.255 Sum_probs=90.0
Q ss_pred cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCC--------CC
Q 004998 600 QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYI--------KS 670 (720)
Q Consensus 600 ~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~--------~~ 670 (720)
-..+.||.+.|+++.|+|.|.+|||||.|+|+|||...... .+..|. |...|..+.|+|.+ +.
T Consensus 352 ~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~--------~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~ 423 (524)
T KOG0273|consen 352 VKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSN--------SVHDLQAHSKEIYTIKWSPTGPVTSNPNMNL 423 (524)
T ss_pred ceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCc--------chhhhhhhccceeeEeecCCCCccCCCcCCc
Confidence 46788899999999999999999999999999999965431 111221 23457777776654 45
Q ss_pred EEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 671 QIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 671 ~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.|||++.|+||++||+..|+++.+ |++++|+|.+.++++|+||.--
T Consensus 424 ~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V 476 (524)
T KOG0273|consen 424 MLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCV 476 (524)
T ss_pred eEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCee
Confidence 799999999999999999999987 8999999999999999999753
|
|
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=99.52 E-value=4.8e-14 Score=157.23 Aligned_cols=119 Identities=9% Similarity=0.165 Sum_probs=101.8
Q ss_pred ccccceEEeeeec-c--CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEE
Q 004998 587 LSFSKLRVKADLN-Q--GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSI 662 (720)
Q Consensus 587 ~~~~~~~~~~~l~-~--~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v 662 (720)
....+.+++++-. + .-+.+|-+-|.||+|+|+..|+||||.|++||+||..++. .|..+ +|++.|.+|
T Consensus 512 s~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~--------~VRiF~GH~~~V~al 583 (707)
T KOG0263|consen 512 SHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGN--------SVRIFTGHKGPVTAL 583 (707)
T ss_pred CCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCc--------EEEEecCCCCceEEE
Confidence 4455666777665 2 4467889999999999999999999999999999998872 35555 458899999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004998 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 663 ~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+|||. +.+||||+.||.|+|||+.+|..+.+ |+++.|+..|..+++|+.|-
T Consensus 584 ~~Sp~-Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~Dn 641 (707)
T KOG0263|consen 584 AFSPC-GRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADN 641 (707)
T ss_pred EEcCC-CceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCC
Confidence 99995 56999999999999999999988765 99999999999999999874
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.3e-13 Score=150.30 Aligned_cols=198 Identities=17% Similarity=0.255 Sum_probs=144.2
Q ss_pred cccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc-eeccCC
Q 004998 71 LTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI-VVHNVR 148 (720)
Q Consensus 71 Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI-vHrDLK 148 (720)
|..+.|.|+.++++.++ ++ ..++++.+| .-|+|.+.+......++..-...++++|+.||.|||.-.| .|+.|+
T Consensus 1 l~~l~h~n~~~f~g~~~-~~---~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~ 76 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASV-DG---PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALK 76 (484)
T ss_pred CcccchhhhhhheeeEe-cC---CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeec
Confidence 46789999999999544 44 367999999 8999999997767779999999999999999999998766 999999
Q ss_pred CCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccC
Q 004998 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
+.|.+++..-.+|+.|||+....... .++..
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~---------------------------------~~~~~---------------- 107 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEET---------------------------------AEPEA---------------- 107 (484)
T ss_pred cccceeeeeEEEEechhhhccccccc---------------------------------ccccc----------------
Confidence 99999999999999888876322100 00000
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-------CCccccchhhhhhh
Q 004998 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-------VSCASDIYRLGVLL 301 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-------~s~~sDIwSLGvll 301 (720)
.....-...|.|||.+.+.. .+.+.||||+|+++
T Consensus 108 ---------------------------------------~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~ 148 (484)
T KOG1023|consen 108 ---------------------------------------HHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIM 148 (484)
T ss_pred ---------------------------------------cchhHHHHhccCHHHhcccccccccccccccCCeehHHHHH
Confidence 00011234689999997742 36789999999999
Q ss_pred hhccc---cCCCCc---hHHHHHHHhhc-CC--CCcccc-c-cCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC---PFSTGE---EKTRTMSSLRH-RV--LPPQLL-L-KFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~---~~~~~~~~l~~-~~--~p~~~~-~-~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|+++ ||.... ...+....+.+ +. +.|... . ..+ ....++..||..+|..||+++++-.
T Consensus 149 ~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~ 219 (484)
T KOG1023|consen 149 YEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS 219 (484)
T ss_pred HHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence 99999 776531 11233333443 21 222222 1 333 3558999999999999999988754
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.2e-14 Score=143.04 Aligned_cols=99 Identities=9% Similarity=0.099 Sum_probs=77.4
Q ss_pred eehhhhcccC-----CCCCceecccceeecCCCCCc-EEEEEecCC---CCHHHHHhCCCCCCCHHHHHHHHHHHHHHH-
Q 004998 65 HSDGVELTHG-----DHLRNQGGLSGVCENEAAIDP-FVHAIEWGD---VSLRQWLDKPKRSVDVYECLHIFRQIVEIV- 134 (720)
Q Consensus 65 ~~e~~~Ls~l-----~HpnIV~l~~~~~~~~~~~~~-~~lv~E~~g---gsL~~~L~~~~~~l~~~~~~~i~~QIl~aL- 134 (720)
.+|+.++.++ +||||+++|+ +++++..... +.+||||.| ++|.+++.+. .+++. ..++.|++.++
T Consensus 44 ~rEi~~l~~L~~~~~~h~nIvr~yg-~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~ 118 (210)
T PRK10345 44 RRELKYYAHLSRRLIDWSGIPRYYG-TVETDCGTGYVYDVIADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLK 118 (210)
T ss_pred HHHHHHHHHhhccCCCCcccceeeE-EEEeCCCCeEEEEEEecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHH
Confidence 4777788888 6899999999 6655543334 447899944 8999999553 26655 36688888888
Q ss_pred HHHHHcCceeccCCCCcEEEccC----CceEEeccCcc
Q 004998 135 YAAHSQGIVVHNVRPSCFVMSSF----NHVSFIESASC 168 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~----~~vkliDfg~a 168 (720)
+|||+++||||||||+|||++.. .+++|+||+.+
T Consensus 119 ~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 119 RYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred HHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 99999999999999999999743 37999995554
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.49 E-value=3.1e-13 Score=153.67 Aligned_cols=113 Identities=19% Similarity=0.205 Sum_probs=90.6
Q ss_pred CCCCCCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+|+|+|+ +.+|||||.|++|+|||+.+..........|+..+ .|...|.+|+|+|.+..+||||+.|++
T Consensus 70 L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~Dgt 149 (568)
T PTZ00420 70 LKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSF 149 (568)
T ss_pred EcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCe
Confidence 4567999999999997 78999999999999999875311111111244444 457789999999987777899999999
Q ss_pred EEEEECCCCcEEEE------EEEEeecCCceEEEecCccce
Q 004998 681 VQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 681 v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|+|||+++++.+.+ |.|++|++.+..++.++-|..
T Consensus 150 IrIWDl~tg~~~~~i~~~~~V~SlswspdG~lLat~s~D~~ 190 (568)
T PTZ00420 150 VNIWDIENEKRAFQINMPKKLSSLKWNIKGNLLSGTCVGKH 190 (568)
T ss_pred EEEEECCCCcEEEEEecCCcEEEEEECCCCCEEEEEecCCE
Confidence 99999999986654 899999999999998887753
|
|
| >KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.4e-13 Score=144.04 Aligned_cols=89 Identities=20% Similarity=0.363 Sum_probs=74.3
Q ss_pred eEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe----cCCCCEEEEEEecC
Q 004998 592 LRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM----ASRSKLSSICWNSY 667 (720)
Q Consensus 592 ~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----~~~~~i~~v~~~~~ 667 (720)
||-..+++ .|+..|+||.|+|||++|||+|.||+|.|||-.++. -+.++ .|++.|..|+|+|+
T Consensus 180 FKFk~s~r-----~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge--------~vg~l~~~~aHkGsIfalsWsPD 246 (603)
T KOG0318|consen 180 FKFKSSFR-----EHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGE--------KVGELEDSDAHKGSIFALSWSPD 246 (603)
T ss_pred eeeeeccc-----ccccceeeEEECCCCCeEEEecCCccEEEEcCCCcc--------EEEEecCCCCccccEEEEEECCC
Confidence 44455555 358899999999999999999999999999987762 22232 45888999999996
Q ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004998 668 IKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 668 ~~~~laS~s~D~~v~lWDv~tg~~~~~ 694 (720)
. .+++|+|.|+++|||||.+++++++
T Consensus 247 s-~~~~T~SaDkt~KIWdVs~~slv~t 272 (603)
T KOG0318|consen 247 S-TQFLTVSADKTIKIWDVSTNSLVST 272 (603)
T ss_pred C-ceEEEecCCceEEEEEeeccceEEE
Confidence 5 6899999999999999999998886
|
|
| >KOG0266 consensus WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.48 E-value=2.9e-13 Score=152.62 Aligned_cols=127 Identities=13% Similarity=0.179 Sum_probs=105.9
Q ss_pred hhhhhccccceEEeeeecc----CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCC
Q 004998 582 GLCKYLSFSKLRVKADLNQ----GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASR 656 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~----~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~ 656 (720)
.|...+...++|+++.... ..+.+|.+.|+||+|+|+|+++++||.|++|||||+.++ .++..+ .|.
T Consensus 217 ~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~--------~~~~~l~~hs 288 (456)
T KOG0266|consen 217 YLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTG--------ECVRKLKGHS 288 (456)
T ss_pred EEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCC--------eEEEeeeccC
Confidence 4666666777777776222 356789999999999999999999999999999999875 244444 457
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCc--EEEE---------EEEEeecCCceEEEecCcc-ceEE
Q 004998 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLI--YFSA---------LYCIVLNKLLIIFRYGMFQ-EVKY 717 (720)
Q Consensus 657 ~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~--~~~~---------v~~v~~~~~~~~~~~~~~~-~~~~ 717 (720)
+.|++++|+++ +++|+++|+|++|+|||+.+|+ ++.+ ++++.|+|.+.++..+..| .+++
T Consensus 289 ~~is~~~f~~d-~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~ 360 (456)
T KOG0266|consen 289 DGISGLAFSPD-GNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKL 360 (456)
T ss_pred CceEEEEECCC-CCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEE
Confidence 79999999995 5799999999999999999999 4443 6999999999999999999 6766
|
|
| >KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription] | Back alignment and domain information |
|---|
Probab=99.47 E-value=1.2e-13 Score=154.01 Aligned_cols=132 Identities=13% Similarity=0.068 Sum_probs=108.1
Q ss_pred ccchhhhhhhhccccceEEeeeecc---CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE
Q 004998 576 INPFLEGLCKYLSFSKLRVKADLNQ---GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE 652 (720)
Q Consensus 576 ~~~~~~~l~~~~~~~~~~~~~~l~~---~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 652 (720)
+.+-..-|..+...++.|.+.-... -.+.||..+|+.|.|+|-|-||||||.|+|.++|..... +|+..
T Consensus 459 FsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~--------~PlRi 530 (707)
T KOG0263|consen 459 FSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHN--------KPLRI 530 (707)
T ss_pred ecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccC--------Cchhh
Confidence 3333344555666666666655442 356799999999999999999999999999999997654 57754
Q ss_pred e-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 653 M-ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 653 ~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+ +|-+.|.||.|.|+ .+++|+||.|+|||+||+.+|.+++- |.+++|+|+|-++++|+=|-+.
T Consensus 531 faghlsDV~cv~FHPN-s~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I 601 (707)
T KOG0263|consen 531 FAGHLSDVDCVSFHPN-SNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLI 601 (707)
T ss_pred hcccccccceEEECCc-ccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcE
Confidence 4 55888999999995 67999999999999999999999885 8999999999999999877543
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.46 E-value=2.8e-14 Score=164.34 Aligned_cols=213 Identities=13% Similarity=0.156 Sum_probs=153.9
Q ss_pred eeeeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 62 LRKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
.+.-.|..+-..+. |+|++++++ ........++.++| .|+++.+.+ .......+...+..++.|+..+|.|+|
T Consensus 65 ~~i~~e~~~~~~~s~h~n~~~~~~----~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H 140 (601)
T KOG0590|consen 65 EHIDTETDIQKKLSKHSNTVHMIE----PSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLH 140 (601)
T ss_pred hhcCccccccccccccccccccCC----ccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccC
Confidence 34334544555555 999999999 33334467999999 999999988 444435788899999999999999999
Q ss_pred -HcCceeccCCCCcEEEccCC-ceEEeccCcccCCCC-CCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 139 -SQGIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGS-DSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 139 -s~gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
..++.||||||+|.+++.++ .+++.|||++..+.. ...+
T Consensus 141 ~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~-------------------------------------- 182 (601)
T KOG0590|consen 141 PENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAE-------------------------------------- 182 (601)
T ss_pred cccccccCCCCCccchhccCCCcccCCCchhhccccccCCcc--------------------------------------
Confidence 99999999999999999988 888888877744322 1000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCcccccccc-CCcccCCccccCCC-CCcccc
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLME-TNWYASPEELAGAP-VSCASD 293 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~G-T~~Y~APE~l~~~~-~s~~sD 293 (720)
. .....+| ++.|+|||...+.. ..+..|
T Consensus 183 -------~-------------------------------------------~~~~~~g~s~~y~a~E~~~~~~~~~~~~d 212 (601)
T KOG0590|consen 183 -------R-------------------------------------------SLKDRCGSSPPYGAPEHLSGKAYRGPSVD 212 (601)
T ss_pred -------e-------------------------------------------eeecccCCCCCCCCcccccchhhcCCCcc
Confidence 0 0112467 99999999998854 688999
Q ss_pred chhhhhhhhhccc---cCCCCchHHHH-HHHhhcC-C-CCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 294 IYRLGVLLFELFC---PFSTGEEKTRT-MSSLRHR-V-LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~-~~~l~~~-~-~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
+||+|+++.-+++ |+......... ....... . ....+........+++.++|..+|..|.+.+++-.+||+..
T Consensus 213 ~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 213 VWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred cccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 9999999999998 43322111111 1111111 1 11222233345569999999999999999999999999998
|
|
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.6e-14 Score=150.43 Aligned_cols=157 Identities=20% Similarity=0.320 Sum_probs=97.4
Q ss_pred EEEEEecCCCCHHHHHh---CCCC---CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCccc
Q 004998 96 FVHAIEWGDVSLRQWLD---KPKR---SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCS 169 (720)
Q Consensus 96 ~~lv~E~~ggsL~~~L~---~~~~---~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~ 169 (720)
.+++|+-..++|.+++. .... .+.....+.+..|++..+++||+.||||+||||+||+++.+|.+.|.||+...
T Consensus 114 ~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~ 193 (288)
T PF14531_consen 114 RFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLV 193 (288)
T ss_dssp EEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEE
T ss_pred hhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHe
Confidence 47788888889988862 1111 13333445666999999999999999999999999999999999998776553
Q ss_pred CCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccc
Q 004998 170 DSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILD 249 (720)
Q Consensus 170 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d 249 (720)
..|....
T Consensus 194 r~g~~~~------------------------------------------------------------------------- 200 (288)
T PF14531_consen 194 RAGTRYR------------------------------------------------------------------------- 200 (288)
T ss_dssp ETTEEEE-------------------------------------------------------------------------
T ss_pred ecCceee-------------------------------------------------------------------------
Confidence 2211100
Q ss_pred cccchhhhhcccCCCCccccccccCCcccCCccccCC--------CCCccccchhhhhhhhhccc---cCCCCchHHHHH
Q 004998 250 NRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--------PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTM 318 (720)
Q Consensus 250 ~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--------~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~ 318 (720)
....+..|.+||..... .++.+.|.|+||+++|.|+| ||..........
T Consensus 201 --------------------~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~ 260 (288)
T PF14531_consen 201 --------------------CSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPE 260 (288)
T ss_dssp --------------------GGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSG
T ss_pred --------------------ccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCcccccc
Confidence 01224668899877432 37899999999999999999 776543221100
Q ss_pred HHhhcCCCCccccccCchH-HHHHHHcCCCCCCCC
Q 004998 319 SSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGR 352 (720)
Q Consensus 319 ~~l~~~~~p~~~~~~~p~~-~~li~~~L~~dP~~R 352 (720)
..+.. .. ..|+. ..||..||+++|.+|
T Consensus 261 ~~f~~------C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 261 WDFSR------CR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp GGGTT------SS----HHHHHHHHHHT-SSGGGS
T ss_pred ccchh------cC-CcCHHHHHHHHHHccCCcccC
Confidence 01111 11 33443 489999999999988
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.45 E-value=2.2e-13 Score=139.40 Aligned_cols=196 Identities=15% Similarity=0.127 Sum_probs=139.0
Q ss_pred cCCcccccccccC----CCCCCccccccccccCCCCccceeee-ehhhhcccCCCCCceecccceeecCCCCCcEEEEEe
Q 004998 27 DSSRALNISGVSD----RNPRLLRGERFGVRGDDSNDFELRKH-SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIE 101 (720)
Q Consensus 27 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~r~~-~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E 101 (720)
.-++.+|.+.|+. .|.-.+.-..|.|....+..-.+|.| |--.+|. .-++|..+|. .+..+-+-.+|||
T Consensus 31 rVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~--g~~GIP~vYY----FGqeG~~NiLVid 104 (449)
T KOG1165|consen 31 RVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLG--GTEGIPQVYY----FGQEGKYNILVID 104 (449)
T ss_pred eeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHc--CCCCCCceee----eccccchhhhhhh
Confidence 3345555555554 23222222334444444444455555 4444665 4688888776 3333345589999
Q ss_pred cCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccC-----CceEEeccCcccCCCCCCc
Q 004998 102 WGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSF-----NHVSFIESASCSDSGSDSH 176 (720)
Q Consensus 102 ~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~-----~~vkliDfg~a~~~g~~~~ 176 (720)
+.|.+|.|++.--++.++...+..++.|++.-++|+|++.+|.|||||+|+||... +.|.++|||+++.+-.+..
T Consensus 105 LLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~T 184 (449)
T KOG1165|consen 105 LLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKT 184 (449)
T ss_pred hhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccc
Confidence 99999999987778889999999999999999999999999999999999999733 4588888888876544422
Q ss_pred ccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhh
Q 004998 177 EEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQ 256 (720)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~ 256 (720)
.. +++..|.
T Consensus 185 kq--------------------------------------------------------HIPYrE~--------------- 193 (449)
T KOG1165|consen 185 KQ--------------------------------------------------------HIPYREH--------------- 193 (449)
T ss_pred cc--------------------------------------------------------cCccccc---------------
Confidence 11 1111111
Q ss_pred hhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCC
Q 004998 257 VEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTG 311 (720)
Q Consensus 257 ~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~ 311 (720)
....||..||+---..|...+..-|+=|||-++++.|- ||.+.
T Consensus 194 ------------KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGL 239 (449)
T KOG1165|consen 194 ------------KSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL 239 (449)
T ss_pred ------------cccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccc
Confidence 12579999999998889989999999999988888776 77653
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.3e-13 Score=136.90 Aligned_cols=101 Identities=10% Similarity=0.069 Sum_probs=78.2
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH-HHcCce
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA-HSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yL-Hs~gIv 143 (720)
.|..+|.++.|++|...+. .. .. ..++|||| .|++|...+... ..++..++..++.||+.+|.|+ |+.||+
T Consensus 68 ~E~~~l~~l~~~~v~~p~~-~~-~~----~~~iVmE~i~g~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~l~H~~gii 140 (190)
T cd05147 68 KEMRNLKRLVTAGIPCPEP-IL-LK----SHVLVMEFIGDDGWAAPRLKD-APLSESKARELYLQVIQIMRILYQDCRLV 140 (190)
T ss_pred HHHHHHHHHHHCCCCCCcE-EE-ec----CCEEEEEEeCCCCCcchhhhc-CCCCHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 4778888888888744333 21 11 12799999 766665543232 3589999999999999999999 799999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCC
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSD 174 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~ 174 (720)
||||||+|||++ ++.++|+|||++...+.+
T Consensus 141 HrDlkP~NIli~-~~~v~LiDFG~a~~~~~~ 170 (190)
T cd05147 141 HADLSEYNLLYH-DGKLYIIDVSQSVEHDHP 170 (190)
T ss_pred cCCCCHHHEEEE-CCcEEEEEccccccCCCc
Confidence 999999999998 588999999999654433
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >KOG0283 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.4e-13 Score=151.68 Aligned_cols=112 Identities=16% Similarity=0.310 Sum_probs=91.0
Q ss_pred CCCC-CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCc----------------------------ccc----cc----
Q 004998 601 GDLL-NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA----------------------------IIN----EN---- 643 (720)
Q Consensus 601 ~~~~-~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~----------------------------~~~----~~---- 643 (720)
.++. .|.+.|.++.|++||+||||||.|+.||||.+.. ... ..
T Consensus 260 Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 260 QEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred eccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 4556 7899999999999999999999999999998643 000 00
Q ss_pred ------ccc----------ccceEE-ecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEee
Q 004998 644 ------RDI----------HYPVVE-MASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVL 700 (720)
Q Consensus 644 ------~~~----------~~~~~~-~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~ 700 (720)
..+ ..|+.+ ++|.+.|..|+||.+ ++|.|+|.|+|||||++.+.+|+.. |+||+|
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn--~fLLSSSMDKTVRLWh~~~~~CL~~F~HndfVTcVaF 417 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN--NFLLSSSMDKTVRLWHPGRKECLKVFSHNDFVTCVAF 417 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheecccccC--CeeEeccccccEEeecCCCcceeeEEecCCeeEEEEe
Confidence 001 124444 456888999999984 6999999999999999999999998 999999
Q ss_pred cCC-ceEEEecCccc
Q 004998 701 NKL-LIIFRYGMFQE 714 (720)
Q Consensus 701 ~~~-~~~~~~~~~~~ 714 (720)
||. -.++.+||+|-
T Consensus 418 nPvDDryFiSGSLD~ 432 (712)
T KOG0283|consen 418 NPVDDRYFISGSLDG 432 (712)
T ss_pred cccCCCcEeeccccc
Confidence 995 68999999984
|
|
| >KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.43 E-value=9.5e-13 Score=131.21 Aligned_cols=106 Identities=12% Similarity=0.201 Sum_probs=89.8
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceE-EecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV-EMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
|.||++.|+.|+.++||.++.|||.|+++|+||+.++ .+.. ...|...|.+|+|||+. .+|+|||.|+||
T Consensus 59 ~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g--------~~t~~f~GH~~dVlsva~s~dn-~qivSGSrDkTi 129 (315)
T KOG0279|consen 59 LTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATG--------ESTRRFVGHTKDVLSVAFSTDN-RQIVSGSRDKTI 129 (315)
T ss_pred eeccceEecceEEccCCceEEeccccceEEEEEecCC--------cEEEEEEecCCceEEEEecCCC-ceeecCCCccee
Confidence 4578999999999999999999999999999999886 2343 44567789999999975 589999999999
Q ss_pred EEEECCCCcEEEE--------EEEEeecCC--ceEEEecCccceEE
Q 004998 682 QVGQVLHLIYFSA--------LYCIVLNKL--LIIFRYGMFQEVKY 717 (720)
Q Consensus 682 ~lWDv~tg~~~~~--------v~~v~~~~~--~~~~~~~~~~~~~~ 717 (720)
++||+-.+....- |.||.|+|. ..+|++++-|+.-.
T Consensus 130 klwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvK 175 (315)
T KOG0279|consen 130 KLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVK 175 (315)
T ss_pred eeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEE
Confidence 9999976543321 899999998 89999999998643
|
|
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.42 E-value=3.1e-13 Score=134.39 Aligned_cols=100 Identities=13% Similarity=0.096 Sum_probs=78.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHH-HHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cC
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQ-WLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QG 141 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~-~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~g 141 (720)
.+|...+.++.|++|..... +.... .|+|||| .|+++.. .+.. ..++..++..++.|++.+|.++|+ +|
T Consensus 67 ~~E~~~l~~l~~~~i~~p~~-~~~~~-----~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~g 138 (190)
T cd05145 67 EKEFRNLKRLYEAGVPVPEP-ILLKK-----NVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEAG 138 (190)
T ss_pred HHHHHHHHHHHhCCCCCceE-EEecC-----CEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 36777888899998754433 11111 3799999 6665443 3432 347889999999999999999999 99
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCC
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 173 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~ 173 (720)
|+||||||+|||++ ++.++|+|||++.....
T Consensus 139 ivHrDlkP~NIll~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 139 LVHGDLSEYNILYH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred EecCCCChhhEEEE-CCCEEEEEcccceecCC
Confidence 99999999999998 89999999999976543
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.41 E-value=9.5e-13 Score=128.18 Aligned_cols=104 Identities=15% Similarity=0.138 Sum_probs=90.1
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
|..+.+.|+.+.|+.||+|..|||.|++||+|+...+ ..+.+..+ ...|..++-+.+ ...+|||+-|+.|
T Consensus 13 l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg--------~liktYsghG~EVlD~~~s~D-nskf~s~GgDk~v 83 (307)
T KOG0316|consen 13 LDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRG--------ALIKTYSGHGHEVLDAALSSD-NSKFASCGGDKAV 83 (307)
T ss_pred ecccccceEEEEEccCCCEEEEcCCCceEEeeccccc--------ceeeeecCCCceeeecccccc-ccccccCCCCceE
Confidence 4456899999999999999999999999999997665 24555544 567999988875 4589999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+|||.||+.++. |+.|.||+..+.+.+|+||--
T Consensus 84 ~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s 124 (307)
T KOG0316|consen 84 QVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSS 124 (307)
T ss_pred EEEEcccCeeeeecccccceeeEEEecCcceEEEeccccce
Confidence 9999999999886 999999999999999999964
|
|
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.41 E-value=3.4e-13 Score=140.21 Aligned_cols=128 Identities=16% Similarity=0.168 Sum_probs=101.4
Q ss_pred ccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC
Q 004998 576 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 655 (720)
Q Consensus 576 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 655 (720)
+++-..+..|||.-+ +.++.... .+|+..|.+++|+|....|+|||.|++|+|||+....++. +.-+|
T Consensus 154 iSgD~gG~iKyWqpn-mnnVk~~~----ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~-------vL~GH 221 (464)
T KOG0284|consen 154 ISGDKGGMIKYWQPN-MNNVKIIQ----AHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEER-------VLRGH 221 (464)
T ss_pred EEcCCCceEEecccc-hhhhHHhh----HhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhh-------eeccC
Confidence 334445577888764 33333333 1357899999999999999999999999999987653221 11234
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 656 ~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.-.|.||.|.|. +..|||+|.|..||+||.++|+|+.+ |..+.|++.++.+.++|=|..-
T Consensus 222 gwdVksvdWHP~-kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~ 288 (464)
T KOG0284|consen 222 GWDVKSVDWHPT-KGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSC 288 (464)
T ss_pred CCCcceeccCCc-cceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceE
Confidence 567999999995 67999999999999999999999986 9999999999999999988764
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=5.6e-13 Score=132.29 Aligned_cols=92 Identities=12% Similarity=0.126 Sum_probs=76.2
Q ss_pred eeeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.++. |++|+++++ + . ..|++||| .|.+|.+.+.. ....++.|++.+|.++|++
T Consensus 47 l~~rE~~iL~~L~~~~~vP~ll~-~---~----~~~lvmeyI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~ 110 (218)
T PRK12274 47 LARREALALRQLDGLPRTPRLLH-W---D----GRHLDRSYLAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRC 110 (218)
T ss_pred HHHHHHHHHHhcCCCCCCCEEEE-E---c----CEEEEEeeecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHC
Confidence 4568899999995 478989888 2 1 35899999 99999764411 1235789999999999999
Q ss_pred CceeccC-CCCcEEEccCCceEEeccCcccC
Q 004998 141 GIVVHNV-RPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 141 gIvHrDL-KP~NILl~~~~~vkliDfg~a~~ 170 (720)
||+|||| ||+|||++.++.++|+|||++..
T Consensus 111 GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~ 141 (218)
T PRK12274 111 GVAHNDLAKEANWLVQEDGSPAVIDFQLAVR 141 (218)
T ss_pred cCccCCCCCcceEEEcCCCCEEEEECCCcee
Confidence 9999999 79999999999999999999964
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.40 E-value=8.3e-13 Score=129.87 Aligned_cols=135 Identities=19% Similarity=0.213 Sum_probs=104.5
Q ss_pred cEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEc---cCCceEEeccCcccCC
Q 004998 95 PFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS---SFNHVSFIESASCSDS 171 (720)
Q Consensus 95 ~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~---~~~~vkliDfg~a~~~ 171 (720)
+-.+||++.|.+|.+++.--.+.++...++.++-|++.-|+|+|.+++|||||||+|+|+. ..+++.+||||+++.+
T Consensus 85 ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 85 YNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred cceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhh
Confidence 4589999999999998865566699999999999999999999999999999999999996 4567899999888554
Q ss_pred CCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccc
Q 004998 172 GSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNR 251 (720)
Q Consensus 172 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g 251 (720)
-..... .+++..++
T Consensus 165 ~d~~t~--------------------------------------------------------~HIpyre~---------- 178 (341)
T KOG1163|consen 165 RDIRTR--------------------------------------------------------QHIPYRED---------- 178 (341)
T ss_pred cccccc--------------------------------------------------------ccCccccC----------
Confidence 221110 11111111
Q ss_pred cchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCc
Q 004998 252 VNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGE 312 (720)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~ 312 (720)
....||..|.+--...+...+..-|+=|+|-+|.++.- ||.+..
T Consensus 179 -----------------r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk 225 (341)
T KOG1163|consen 179 -----------------RNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK 225 (341)
T ss_pred -----------------CccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence 22679999999888888778899999999966655544 777653
|
|
| >KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.6e-12 Score=143.94 Aligned_cols=84 Identities=20% Similarity=0.303 Sum_probs=72.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
..+|...++|++++|||+++|||+.|++|||||..++. |-++.-.|++.|+.|+|.. .++.|.|+|-|||||
T Consensus 346 QQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~Sgf-------C~vTFteHts~Vt~v~f~~-~g~~llssSLDGtVR 417 (893)
T KOG0291|consen 346 QQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGF-------CFVTFTEHTSGVTAVQFTA-RGNVLLSSSLDGTVR 417 (893)
T ss_pred ccccccceeeEEECCCCcEEEeccCCCcEEEEeccCce-------EEEEeccCCCceEEEEEEe-cCCEEEEeecCCeEE
Confidence 45789999999999999999999999999999988763 3334446799999999998 467999999999999
Q ss_pred EEECCCCcEEEE
Q 004998 683 VGQVLHLIYFSA 694 (720)
Q Consensus 683 lWDv~tg~~~~~ 694 (720)
.||+...++.+|
T Consensus 418 AwDlkRYrNfRT 429 (893)
T KOG0291|consen 418 AWDLKRYRNFRT 429 (893)
T ss_pred eeeecccceeee
Confidence 999988887775
|
|
| >KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.6e-12 Score=133.24 Aligned_cols=108 Identities=14% Similarity=0.145 Sum_probs=93.9
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCC
Q 004998 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
..+.+|.+||.||+++|.+++|||||.|++|+|||++++. ....++ |-..|..|++|+-+ .+|.|++.|+
T Consensus 145 rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~--------LkltltGhi~~vr~vavS~rH-pYlFs~gedk 215 (460)
T KOG0285|consen 145 RVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQ--------LKLTLTGHIETVRGVAVSKRH-PYLFSAGEDK 215 (460)
T ss_pred hhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCe--------EEEeecchhheeeeeeecccC-ceEEEecCCC
Confidence 3467889999999999999999999999999999999872 223343 47789999999965 5999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.||-||+...+.|+. |+|++..|..-.+.+|+=|-+..
T Consensus 216 ~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~R 260 (460)
T KOG0285|consen 216 QVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIR 260 (460)
T ss_pred eeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEE
Confidence 999999999998875 99999999999999999887643
|
|
| >KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.38 E-value=1.4e-12 Score=134.65 Aligned_cols=127 Identities=13% Similarity=0.137 Sum_probs=98.5
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceE-EecCCCC
Q 004998 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV-EMASRSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~ 658 (720)
.+...+-|...+.+.+.++.. .-..+||+.+|...+||+||.|+-||+||.++.. ..-+.. ..+|++.
T Consensus 279 wDHTIk~WDletg~~~~~~~~------~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~-----gs~v~~s~~gH~nw 347 (423)
T KOG0313|consen 279 WDHTIKVWDLETGGLKSTLTT------NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGD-----GSVVSQSLIGHKNW 347 (423)
T ss_pred ccceEEEEEeecccceeeeec------CcceeEeecccccceeeecCCCCceeecCCCCCC-----CceeEEeeecchhh
Confidence 333444444444444444443 4678999999999999999999999999998872 222333 4567889
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCc-EEEE-------EEEEeecCCceEEEecCccceEEc
Q 004998 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLI-YFSA-------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 659 i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~-~~~~-------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
|++|.|+|-+..+|+|+|||++|||||+++-+ .+.+ |+|+.|++. .+|++|..|.-.+.
T Consensus 348 Vssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~~-~~IvSGGaD~~l~i 414 (423)
T KOG0313|consen 348 VSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNEG-GLIVSGGADNKLRI 414 (423)
T ss_pred hhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccCC-ceEEeccCcceEEE
Confidence 99999999988999999999999999999887 6665 999999975 57788888875543
|
|
| >KOG0295 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.5e-12 Score=130.37 Aligned_cols=122 Identities=12% Similarity=0.167 Sum_probs=100.4
Q ss_pred hccccceEEeeeecc---CCCCCCCCCeEEEEECCC---------------CCEEEEeeCCCcEEEeeCCcccccccccc
Q 004998 586 YLSFSKLRVKADLNQ---GDLLNSSNLVCSLSFDRD---------------GELFAAAGVNKKIKVFECDAIINENRDIH 647 (720)
Q Consensus 586 ~~~~~~~~~~~~l~~---~~~~~~~~~V~sv~f~~d---------------g~~lat~~~d~~i~iwd~~~~~~~~~~~~ 647 (720)
.....+++++-.-.. ..|..|...|-||+|-|. |+++++||.||+||+||+.++.
T Consensus 253 ~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~------- 325 (406)
T KOG0295|consen 253 CSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGM------- 325 (406)
T ss_pred cCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCe-------
Confidence 333455666544332 457788999999999653 2589999999999999998883
Q ss_pred cceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 648 YPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 648 ~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|.....+|.+.|+.++|+| ++.+|+|+..|+|++|||+.+++|+.+ |.|++|....-+.++|+.|+-
T Consensus 326 cL~tL~ghdnwVr~~af~p-~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt 399 (406)
T KOG0295|consen 326 CLFTLVGHDNWVRGVAFSP-GGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQT 399 (406)
T ss_pred EEEEEecccceeeeeEEcC-CCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccce
Confidence 4455567789999999999 566999999999999999999999987 899999999999999999863
|
|
| >KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.8e-12 Score=140.87 Aligned_cols=127 Identities=13% Similarity=0.126 Sum_probs=102.7
Q ss_pred ccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-
Q 004998 576 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM- 653 (720)
Q Consensus 576 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~- 653 (720)
|.+-.+-+.|+|.|.+- ++.- -.+.||++.|.+|+|+| |...|||||.|+|||||.+... .|.-++
T Consensus 113 LtsSDDm~iKlW~we~~--wa~~--qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~--------~~nfTl~ 180 (794)
T KOG0276|consen 113 LTSSDDMTIKLWDWENE--WACE--QTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSP--------HPNFTLE 180 (794)
T ss_pred EecCCccEEEEeeccCc--eeee--eEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCC--------CCceeee
Confidence 44445567888888532 2222 24789999999999998 5578999999999999998655 244344
Q ss_pred cCCCCEEEEEEec-CCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004998 654 ASRSKLSSICWNS-YIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 654 ~~~~~i~~v~~~~-~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
.|...|+||++-+ .++.+|+||+.|.+|||||.+|.+|++| |.++.|+|...+|.+||=|-
T Consensus 181 gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDG 249 (794)
T KOG0276|consen 181 GHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDG 249 (794)
T ss_pred ccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCc
Confidence 4577899999966 3467999999999999999999999997 89999999999999999774
|
|
| >KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.34 E-value=8e-12 Score=125.79 Aligned_cols=86 Identities=14% Similarity=0.103 Sum_probs=68.1
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCC
Q 004998 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
.++.||.+.|+.+.|+|||.+|||||.|+.|-+|+.-.-.+. ...+ .|.+.|..|.|+++ +++|.|++.|+
T Consensus 41 m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN-------~~~lkgHsgAVM~l~~~~d-~s~i~S~gtDk 112 (338)
T KOG0265|consen 41 MLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCEN-------FWVLKGHSGAVMELHGMRD-GSHILSCGTDK 112 (338)
T ss_pred hhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccc-------eeeeccccceeEeeeeccC-CCEEEEecCCc
Confidence 356789999999999999999999999999999984321111 1111 45778999999985 56888999999
Q ss_pred cEEEEECCCCcEEEE
Q 004998 680 VVQVGQVLHLIYFSA 694 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~ 694 (720)
+|+.||++||+++..
T Consensus 113 ~v~~wD~~tG~~~rk 127 (338)
T KOG0265|consen 113 TVRGWDAETGKRIRK 127 (338)
T ss_pred eEEEEecccceeeeh
Confidence 999999988888763
|
|
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.32 E-value=2.2e-11 Score=121.08 Aligned_cols=116 Identities=11% Similarity=0.190 Sum_probs=90.1
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC
Q 004998 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~ 669 (720)
..|+.+++| .||.+.|.||+|+++|.||||+|.||.|=||+.... .+..|.-+.-.|...|.-|.|.| ..
T Consensus 93 ~efecv~~l-----EGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~ded----dEfec~aVL~~HtqDVK~V~WHP-t~ 162 (312)
T KOG0645|consen 93 GEFECVATL-----EGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDED----DEFECIAVLQEHTQDVKHVIWHP-TE 162 (312)
T ss_pred CceeEEeee-----eccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCC----CcEEEEeeeccccccccEEEEcC-Cc
Confidence 456777776 566999999999999999999999999999997632 11112223335677899999999 46
Q ss_pred CEEEEEeCCCcEEEEECCCC---cEEE-------EEEEEeecCCceEEEecCccce
Q 004998 670 SQIASSNFEGVVQVGQVLHL---IYFS-------ALYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 670 ~~laS~s~D~~v~lWDv~tg---~~~~-------~v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+|+|+|||.|||+|+-..+ +|++ ||||++|++.|.-.++++-|--
T Consensus 163 dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~t 218 (312)
T KOG0645|consen 163 DLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGT 218 (312)
T ss_pred ceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcc
Confidence 79999999999999976622 2333 4999999999988888876643
|
|
| >KOG0282 consensus mRNA splicing factor [Function unknown] | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.4e-12 Score=138.28 Aligned_cols=107 Identities=14% Similarity=0.174 Sum_probs=92.3
Q ss_pred CCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC
Q 004998 601 GDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
..+.||+-.|+++.|-| .+.+|++||+|++|+|||+-.- .+|-...+.|+..|..++||+. +..+.|+|||+
T Consensus 208 ~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~------~~~lrtf~gH~k~Vrd~~~s~~-g~~fLS~sfD~ 280 (503)
T KOG0282|consen 208 HNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDD------RRCLRTFKGHRKPVRDASFNNC-GTSFLSASFDR 280 (503)
T ss_pred eeccCCccccchhhhccceeeEEEecCCCceEEEEEEecC------cceehhhhcchhhhhhhhcccc-CCeeeeeecce
Confidence 45678899999999999 9999999999999999997541 2233345566778999999996 46889999999
Q ss_pred cEEEEECCCCcEEEE------EEEEeecCCc-eEEEecCccc
Q 004998 680 VVQVGQVLHLIYFSA------LYCIVLNKLL-IIFRYGMFQE 714 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~------v~~v~~~~~~-~~~~~~~~~~ 714 (720)
+||+||++||+++.. ++||.|+|.. +.+..|++|.
T Consensus 281 ~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ 322 (503)
T KOG0282|consen 281 FLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDK 322 (503)
T ss_pred eeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEecCCC
Confidence 999999999999987 7999999999 9999999886
|
|
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.31 E-value=1e-11 Score=137.61 Aligned_cols=125 Identities=15% Similarity=0.188 Sum_probs=107.7
Q ss_pred hhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCC
Q 004998 579 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRS 657 (720)
Q Consensus 579 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~ 657 (720)
-.+.+++.|+.-.++++++| .||...|.||.|+|..+++||+|.|+|||||.+.++ .++.++. |++
T Consensus 482 SqDktaKiW~le~~~l~~vL-----sGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~f--------SClkT~eGH~~ 548 (775)
T KOG0319|consen 482 SQDKTAKIWDLEQLRLLGVL-----SGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTF--------SCLKTFEGHTS 548 (775)
T ss_pred ccccceeeecccCceEEEEe-----eCCccceEEEEeccccceeEeccCCceEEEEEeccc--------eeeeeecCccc
Confidence 34557888888777777666 456999999999999999999999999999999887 3566665 688
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 658 ~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.|-.++|-.++ .+|+||+.||.||||++.|+.|+++ ||+.+-++...-+.+|.-|-+.-
T Consensus 549 aVlra~F~~~~-~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~ 614 (775)
T KOG0319|consen 549 AVLRASFIRNG-KQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRII 614 (775)
T ss_pred eeEeeeeeeCC-cEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEE
Confidence 99999998765 5899999999999999999999998 99999999999999888776543
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=2e-11 Score=139.04 Aligned_cols=103 Identities=11% Similarity=0.119 Sum_probs=85.7
Q ss_pred CCCCCCCeEEEEECCCCCE-EEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGEL-FAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~-lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+|+|+|++.. |||||.|++|+|||+.+.. .+..+.+...|.+++|+|+ +++||+++.|++|
T Consensus 121 L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~--------~~~~i~~~~~V~Slswspd-G~lLat~s~D~~I 191 (568)
T PTZ00420 121 LKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEK--------RAFQINMPKKLSSLKWNIK-GNLLSGTCVGKHM 191 (568)
T ss_pred eecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCc--------EEEEEecCCcEEEEEECCC-CCEEEEEecCCEE
Confidence 4578899999999999985 6899999999999998762 2333445678999999996 5699999999999
Q ss_pred EEEECCCCcEEEE------------EEEEeecCCceEEEecCccc
Q 004998 682 QVGQVLHLIYFSA------------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 682 ~lWDv~tg~~~~~------------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+|||+++++.+.+ +|+..|++.+..+.++.||.
T Consensus 192 rIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~ 236 (568)
T PTZ00420 192 HIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSK 236 (568)
T ss_pred EEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCC
Confidence 9999999988765 45567788889999998884
|
|
| >KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.29 E-value=5.7e-12 Score=129.16 Aligned_cols=128 Identities=11% Similarity=0.109 Sum_probs=107.1
Q ss_pred ccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-
Q 004998 576 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA- 654 (720)
Q Consensus 576 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~- 654 (720)
+.+-.+.+.++|..-.-+++.. +.||-+.|.|++.+|.-+.|+|||.|.+|||||+++.. +|..|.
T Consensus 209 Fs~gedk~VKCwDLe~nkvIR~-----YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~--------~V~~l~G 275 (460)
T KOG0285|consen 209 FSAGEDKQVKCWDLEYNKVIRH-----YHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRA--------SVHVLSG 275 (460)
T ss_pred EEecCCCeeEEEechhhhhHHH-----hccccceeEEEeccccceeEEecCCcceEEEeeecccc--------eEEEecC
Confidence 4555566778877655444433 45778999999999999999999999999999998873 565665
Q ss_pred CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 655 SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 655 ~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|++.|..|.++|.+. +++|||.|+||++||++.|+...+ |.|++.+|..+.+++++-|-.|.
T Consensus 276 H~~~V~~V~~~~~dp-qvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dnik~ 344 (460)
T KOG0285|consen 276 HTNPVASVMCQPTDP-QVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDNIKQ 344 (460)
T ss_pred CCCcceeEEeecCCC-ceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCcccee
Confidence 588999999999665 799999999999999999998776 89999999999999999887763
|
|
| >KOG1407 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.29 E-value=8.1e-12 Score=123.54 Aligned_cols=108 Identities=13% Similarity=0.189 Sum_probs=87.1
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
.++.+|...|.||+|+.||..||+|+.|++++||++.... .......-.|++.|-.+||+|.+.+.+|+++.|++
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r-----~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ 88 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDR-----FRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKT 88 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchh-----hhhhhcccCCCcchhhheeCCCCCcceEEecCCce
Confidence 5667889999999999999999999999999999976541 11112223457789999999999999999999999
Q ss_pred EEEEECCCCcEEEEE------EEEeecCCceEEEecCcc
Q 004998 681 VQVGQVLHLIYFSAL------YCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 681 v~lWDv~tg~~~~~v------~~v~~~~~~~~~~~~~~~ 713 (720)
|++||+++++|+..+ .=+.|+|.+.++.-|.=|
T Consensus 89 ir~wd~r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kd 127 (313)
T KOG1407|consen 89 IRIWDIRSGKCTARIETKGENINITWSPDGEYIAVGNKD 127 (313)
T ss_pred EEEEEeccCcEEEEeeccCcceEEEEcCCCCEEEEecCc
Confidence 999999999999873 235778887777766544
|
|
| >KOG0283 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.28 E-value=8.6e-12 Score=140.52 Aligned_cols=104 Identities=9% Similarity=0.143 Sum_probs=93.1
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
.+.||+.-|.+|+|+.++ +|.|+|+|||||+|++... .++..+.|.+-|+||+|+|-+.++++|||-||.|
T Consensus 364 ef~GHt~DILDlSWSKn~-fLLSSSMDKTVRLWh~~~~--------~CL~~F~HndfVTcVaFnPvDDryFiSGSLD~Kv 434 (712)
T KOG0283|consen 364 EFKGHTADILDLSWSKNN-FLLSSSMDKTVRLWHPGRK--------ECLKVFSHNDFVTCVAFNPVDDRYFISGSLDGKV 434 (712)
T ss_pred hhhccchhheecccccCC-eeEeccccccEEeecCCCc--------ceeeEEecCCeeEEEEecccCCCcEeecccccce
Confidence 346779999999999854 8889999999999998765 5788889999999999999999999999999999
Q ss_pred EEEECCCCcEEEE------EEEEeecCCceEEEecCccc
Q 004998 682 QVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 682 ~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~~~ 714 (720)
|||++...+.+.. |++|+|.|.|.+.+=|+|+=
T Consensus 435 RiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G 473 (712)
T KOG0283|consen 435 RLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNG 473 (712)
T ss_pred EEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEecc
Confidence 9999998887664 99999999999999999874
|
|
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.3e-11 Score=122.11 Aligned_cols=119 Identities=14% Similarity=0.159 Sum_probs=99.4
Q ss_pred chhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cC
Q 004998 578 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-AS 655 (720)
Q Consensus 578 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~ 655 (720)
.-.+..|.+|..-+.+.+..+ .||++-|.+|+++| +++.|+|||.|++.+|||.+.. ..++.+ .|
T Consensus 162 ~SGD~TCalWDie~g~~~~~f-----~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~--------~c~qtF~gh 228 (343)
T KOG0286|consen 162 GSGDMTCALWDIETGQQTQVF-----HGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSG--------QCVQTFEGH 228 (343)
T ss_pred cCCCceEEEEEcccceEEEEe-----cCCcccEEEEecCCCCCCeEEecccccceeeeeccCc--------ceeEeeccc
Confidence 344556777777666555554 57799999999999 9999999999999999998876 345554 56
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE---------EEEEeecCCceEEEec
Q 004998 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 656 ~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~---------v~~v~~~~~~~~~~~~ 710 (720)
.+.|++|+|-|+ +.-+||||.|+++|++|+++.+.+.. |++|+||..|-++-.|
T Consensus 229 esDINsv~ffP~-G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfag 291 (343)
T KOG0286|consen 229 ESDINSVRFFPS-GDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAG 291 (343)
T ss_pred ccccceEEEccC-CCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEee
Confidence 889999999995 56899999999999999999988875 8999999999887766
|
|
| >KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.8e-11 Score=123.40 Aligned_cols=103 Identities=12% Similarity=0.224 Sum_probs=83.6
Q ss_pred CCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 607 SNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
..-|++|+||| ...++|.||.|++||+||+... +. ..|.....+.+.|.|+||+.+ ++.+++|+.|+.+|+||
T Consensus 27 ~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~-g~----~~~ka~~~~~~PvL~v~Wsdd-gskVf~g~~Dk~~k~wD 100 (347)
T KOG0647|consen 27 EDSISALAFSPQADNLLAAGSWDGTVRIWEVQNS-GQ----LVPKAQQSHDGPVLDVCWSDD-GSKVFSGGCDKQAKLWD 100 (347)
T ss_pred ccchheeEeccccCceEEecccCCceEEEEEecC-Cc----ccchhhhccCCCeEEEEEccC-CceEEeeccCCceEEEE
Confidence 46799999999 5557889999999999998763 11 123333456789999999985 47999999999999999
Q ss_pred CCCCcEEEE------EEEEeecCCce--EEEecCccce
Q 004998 686 VLHLIYFSA------LYCIVLNKLLI--IFRYGMFQEV 715 (720)
Q Consensus 686 v~tg~~~~~------v~~v~~~~~~~--~~~~~~~~~~ 715 (720)
+.+||..+- |.+++|=+... ++++||+|+-
T Consensus 101 L~S~Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKT 138 (347)
T KOG0647|consen 101 LASGQVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKT 138 (347)
T ss_pred ccCCCeeeeeecccceeEEEEecCCCcceeEecccccc
Confidence 999987654 88999977666 9999999984
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=4.4e-11 Score=135.21 Aligned_cols=102 Identities=15% Similarity=0.151 Sum_probs=82.7
Q ss_pred CCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCC
Q 004998 602 DLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
.+.+|...|.+|+|+|++ .+|||||.|++|+|||+.+. .++..+. |...|.+|+|+|+ +++|||++.||
T Consensus 120 ~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg--------~~~~~l~~h~~~V~sla~spd-G~lLatgs~Dg 190 (493)
T PTZ00421 120 HLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERG--------KAVEVIKCHSDQITSLEWNLD-GSLLCTTSKDK 190 (493)
T ss_pred EecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCC--------eEEEEEcCCCCceEEEEEECC-CCEEEEecCCC
Confidence 356789999999999986 69999999999999998765 2344443 5678999999995 57999999999
Q ss_pred cEEEEECCCCcEEEEE--------EEEeecCCceEEEecCc
Q 004998 680 VVQVGQVLHLIYFSAL--------YCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~v--------~~v~~~~~~~~~~~~~~ 712 (720)
+|+|||+++++.+.++ ..+.|.+....+.+..|
T Consensus 191 ~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~ 231 (493)
T PTZ00421 191 KLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGC 231 (493)
T ss_pred EEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEec
Confidence 9999999999988762 35677777666665544
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.25 E-value=9.9e-12 Score=137.59 Aligned_cols=219 Identities=17% Similarity=0.124 Sum_probs=159.0
Q ss_pred ccceeeeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHH----H
Q 004998 59 DFELRKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVE----I 133 (720)
Q Consensus 59 ~~~~r~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~----a 133 (720)
...+|+.+|+.-...++ |+|.++.+..+. ... +.|+-+|++|.+|.++......-++...++.++.+... |
T Consensus 159 ~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e-~~~---~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~a 234 (524)
T KOG0601|consen 159 LDSKRKLREFLSHHKIDSHENPVRDSPAWE-GSG---ILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTA 234 (524)
T ss_pred cccccccchhhcccccCccccccccCcccc-cCC---cceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhccccc
Confidence 34456667765555543 999999888333 332 57999999999999998776666899999999999999 9
Q ss_pred HHHHHHcCceeccCCCCcEEEccC-CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccc
Q 004998 134 VYAAHSQGIVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~-~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
|.++|+.+++|-|+||+||++..+ ...++.|||....++... |
T Consensus 235 l~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~----------------------------------~-- 278 (524)
T KOG0601|consen 235 LSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGN----------------------------------F-- 278 (524)
T ss_pred ccccCCCcccccccchhheecccccceeecCCcceeEEccCCc----------------------------------c--
Confidence 999999999999999999999988 778888887765443321 1
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccc
Q 004998 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 292 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~s 292 (720)
+.... . .....|...|++||.+.+. +++++
T Consensus 279 ~~~~~---------------------------~----------------------~~r~~~~~~Y~~ke~~~~l-~~~~~ 308 (524)
T KOG0601|consen 279 SSVFK---------------------------V----------------------SKRPEGDCIYAAKELLNGL-ATFAS 308 (524)
T ss_pred cccee---------------------------e----------------------eecCCCCceEeChhhhccc-cchHh
Confidence 10000 0 0012467789999999777 89999
Q ss_pred cchhhhhhhhhccccCCCC-chHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 293 DIYRLGVLLFELFCPFSTG-EEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 293 DIwSLGvll~eLltpf~~~-~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||+||.++.+..+.+... ......+..++++.+|..+.... ......+..|+..+|-.|+++..+++|+++...
T Consensus 309 di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~ 385 (524)
T KOG0601|consen 309 DIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSK 385 (524)
T ss_pred hhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccch
Confidence 9999999999877732211 11112234455555666554333 233368889999999999999999999999854
|
|
| >KOG0293 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.6e-11 Score=127.88 Aligned_cols=106 Identities=16% Similarity=0.182 Sum_probs=89.6
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccce--EEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPV--VEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
|..|++.|.-+.||++|+||||||.|.|..||+... +.|..+ +..+|...|+-+.|||++ .+|++|+.|..
T Consensus 220 l~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~------d~~~kl~~tlvgh~~~V~yi~wSPDd-ryLlaCg~~e~ 292 (519)
T KOG0293|consen 220 LQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVY------DVHFKLKKTLVGHSQPVSYIMWSPDD-RYLLACGFDEV 292 (519)
T ss_pred HhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEec------CcceeeeeeeecccCceEEEEECCCC-CeEEecCchHh
Confidence 456799999999999999999999999999999533 222222 344668889999999976 58999999999
Q ss_pred EEEEECCCCcEEEE--------EEEEeecCCceEEEecCccce
Q 004998 681 VQVGQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 681 v~lWDv~tg~~~~~--------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+++|||.||.+... +.|++|.|++--++.||-|--
T Consensus 293 ~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~ 335 (519)
T KOG0293|consen 293 LSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRT 335 (519)
T ss_pred eeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCc
Confidence 99999999988764 889999999999999998743
|
|
| >KOG0295 consensus WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.25 E-value=3e-11 Score=124.40 Aligned_cols=128 Identities=9% Similarity=0.062 Sum_probs=102.5
Q ss_pred ccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC
Q 004998 576 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 655 (720)
Q Consensus 576 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 655 (720)
++.|.+...+-|...+.--+-++. +|+.||..|+.+.||.+||+||.|.++++|=+++.. |....-.|
T Consensus 209 lS~srD~tik~We~~tg~cv~t~~-----~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~-------~k~~lR~h 276 (406)
T KOG0295|consen 209 LSCSRDNTIKAWECDTGYCVKTFP-----GHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQ-------CKAELREH 276 (406)
T ss_pred eecccccceeEEecccceeEEecc-----CchHhEEEEEecCCeeEEEecCCCceEEEEEeccch-------hhhhhhcc
Confidence 666667777777776666665554 458899999999999999999999999999987761 11112234
Q ss_pred CCCEEEEEEecCC--------------CCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004998 656 RSKLSSICWNSYI--------------KSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 656 ~~~i~~v~~~~~~--------------~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
...|-|++|-|.. +++|+|+|.|+|||+||+.||.|+.| |..++|+|.|.+|.|-+=|+
T Consensus 277 Eh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDk 356 (406)
T KOG0295|consen 277 EHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDK 356 (406)
T ss_pred ccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCC
Confidence 5678888887643 25899999999999999999999998 88999999999999987765
Q ss_pred e
Q 004998 715 V 715 (720)
Q Consensus 715 ~ 715 (720)
-
T Consensus 357 t 357 (406)
T KOG0295|consen 357 T 357 (406)
T ss_pred c
Confidence 3
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.25 E-value=1.1e-11 Score=127.83 Aligned_cols=103 Identities=10% Similarity=0.027 Sum_probs=78.9
Q ss_pred eeeehhhhcccCCCCCc--eecccceeecCCCCCcEEEEEec-CC-CCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRN--QGGLSGVCENEAAIDPFVHAIEW-GD-VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnI--V~l~~~~~~~~~~~~~~~lv~E~-~g-gsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
|..+|..++.++.|++| +..++.........+..++|||+ .| .+|.+++... .+++. .+.||+.+|.+||
T Consensus 86 r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~~lH 159 (239)
T PRK01723 86 RAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIARFH 159 (239)
T ss_pred HHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHHHHH
Confidence 44578889999999886 56666322222222234699999 65 7999988543 35554 3678999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~ 171 (720)
++||+||||||.|||++.++.++|+|||.+...
T Consensus 160 ~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~ 192 (239)
T PRK01723 160 DAGVYHADLNAHNILLDPDGKFWLIDFDRGELR 192 (239)
T ss_pred HCCCCCCCCCchhEEEcCCCCEEEEECCCcccC
Confidence 999999999999999999899999999988553
|
|
| >KOG0286 consensus G-protein beta subunit [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.25 E-value=5.5e-11 Score=119.39 Aligned_cols=107 Identities=7% Similarity=0.019 Sum_probs=92.7
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
.|.+|++.++|+.|-+| ..|.|||-|.|+-+||++++. .+..+ +|.+.|.+|+++|...+.++||+.|++
T Consensus 140 ~l~gHtgylScC~f~dD-~~ilT~SGD~TCalWDie~g~--------~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~ 210 (343)
T KOG0286|consen 140 ELAGHTGYLSCCRFLDD-NHILTGSGDMTCALWDIETGQ--------QTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKS 210 (343)
T ss_pred eecCccceeEEEEEcCC-CceEecCCCceEEEEEcccce--------EEEEecCCcccEEEEecCCCCCCeEEecccccc
Confidence 46678999999999884 467788999999999998872 34444 458889999999977889999999999
Q ss_pred EEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 681 VQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 681 v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.+|||++.|.|+++ |++|.|-|.|-.+++||=|..-.
T Consensus 211 aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcR 254 (343)
T KOG0286|consen 211 AKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCR 254 (343)
T ss_pred eeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeE
Confidence 99999999999998 89999999999999999876543
|
|
| >KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.8e-11 Score=127.13 Aligned_cols=112 Identities=14% Similarity=0.195 Sum_probs=95.4
Q ss_pred CCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCC
Q 004998 602 DLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
-+-||+..|..++|+|-++ .|||||.|.+|+||++-.. ....+...|++++.+ .-+|--|.|.|--.|+|+|+++|.
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~-~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn 154 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPEN-GLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDN 154 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCc-ccccCcccceEEEeecceeEEEEeecccchhhHhhccCCc
Confidence 3568999999999999665 6999999999999997532 112234468888765 557999999999899999999999
Q ss_pred cEEEEECCCCcEEEE------EEEEeecCCceEEEecCccc
Q 004998 680 VVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+|.||||.||+.+-+ |++++||..|+++.+..=|+
T Consensus 155 ~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~TtckDK 195 (472)
T KOG0303|consen 155 TVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTTCKDK 195 (472)
T ss_pred eEEEEeccCCceeeecCCCCeEEEEEeccCCceeeeecccc
Confidence 999999999998776 99999999999999998876
|
|
| >KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.7e-11 Score=117.21 Aligned_cols=125 Identities=12% Similarity=0.167 Sum_probs=106.8
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCC
Q 004998 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~ 658 (720)
.+.-+.+|.-++.|++..++ +|...|+.|+|+.+...+++||.|.++|+||+++... .|++.+.. ...
T Consensus 79 gDk~v~vwDV~TGkv~Rr~r-----gH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~------ePiQildea~D~ 147 (307)
T KOG0316|consen 79 GDKAVQVWDVNTGKVDRRFR-----GHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSF------EPIQILDEAKDG 147 (307)
T ss_pred CCceEEEEEcccCeeeeecc-----cccceeeEEEecCcceEEEeccccceeEEEEcccCCC------CccchhhhhcCc
Confidence 34467889999999998876 3489999999999999999999999999999987632 47776655 788
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-----EEEEeecCCceEEEecCccceEEc
Q 004998 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-----LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 659 i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-----v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
|++|..+. +.|++||.||++|.+|++.|+.... |+||.|++.+++..-|++|-...|
T Consensus 148 V~Si~v~~---heIvaGS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~stlrL 209 (307)
T KOG0316|consen 148 VSSIDVAE---HEIVAGSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLDSTLRL 209 (307)
T ss_pred eeEEEecc---cEEEeeccCCcEEEEEeecceeehhhcCCcceeEEecCCCCEEEEeeccceeee
Confidence 99999985 5799999999999999999987665 999999999999999998865443
|
|
| >KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=99.23 E-value=5.9e-11 Score=122.81 Aligned_cols=112 Identities=20% Similarity=0.290 Sum_probs=93.9
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccc-----------------ccccccceEEec-CCCCEEEEEEec
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE-----------------NRDIHYPVVEMA-SRSKLSSICWNS 666 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~-----------------~~~~~~~~~~~~-~~~~i~~v~~~~ 666 (720)
||...|-||+-++||..|+|||.|.+|+||+..+-... ......|+..+. |+.+|++|.|++
T Consensus 191 GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d 270 (423)
T KOG0313|consen 191 GHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD 270 (423)
T ss_pred ccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC
Confidence 89999999999999999999999999999994431000 012345777764 588999999998
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCccceEEc
Q 004998 667 YIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 667 ~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
...+.|+|+|-|||+||+.+|+++.+ ++||++++.+.++++|+-|.-..|
T Consensus 271 --~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl 326 (423)
T KOG0313|consen 271 --ATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRL 326 (423)
T ss_pred --CCceEeecccceEEEEEeecccceeeeecCcceeEeecccccceeeecCCCCceee
Confidence 45899999999999999999999876 899999999999999998875443
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.2e-11 Score=145.78 Aligned_cols=123 Identities=18% Similarity=0.250 Sum_probs=100.4
Q ss_pred EEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEc-------cCCceEEeccCc
Q 004998 96 FVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS-------SFNHVSFIESAS 167 (720)
Q Consensus 96 ~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~-------~~~~vkliDfg~ 167 (720)
-++|+|| .-|||.++++ ..+.+++..++.+..|++..|++||..+|||+||||+|+||. .+--++|||||.
T Consensus 769 S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~ 847 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGR 847 (974)
T ss_pred ceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEeccc
Confidence 4899999 9999999995 555699999999999999999999999999999999999996 233589999998
Q ss_pred ccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccc
Q 004998 168 CSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKI 247 (720)
Q Consensus 168 a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~ 247 (720)
+.|.-.- . .
T Consensus 848 siDm~lf---------------------------------------p--~------------------------------ 856 (974)
T KOG1166|consen 848 SIDMKLF---------------------------------------P--D------------------------------ 856 (974)
T ss_pred ceeeeEc---------------------------------------C--C------------------------------
Confidence 7442100 0 0
Q ss_pred cccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhcccc
Q 004998 248 LDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCP 307 (720)
Q Consensus 248 ~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltp 307 (720)
+ .+-...++|-.+-.+|+..|.++++.+|.|.|..+++-||.+
T Consensus 857 -------------~----~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG 899 (974)
T KOG1166|consen 857 -------------G----TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFG 899 (974)
T ss_pred -------------C----cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHH
Confidence 0 000114678889999999999999999999999999999974
|
|
| >KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.22 E-value=3.5e-12 Score=128.81 Aligned_cols=125 Identities=17% Similarity=0.237 Sum_probs=107.7
Q ss_pred hhhhhhccccceEEeeeecc---CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cC
Q 004998 581 EGLCKYLSFSKLRVKADLNQ---GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--AS 655 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~---~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~ 655 (720)
+++...|.|.+.|+...|++ ..+..+...|.|+.|++|.+++|||+.||+||||-+.++. ++..+ .|
T Consensus 234 DGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~--------ClRrFdrAH 305 (508)
T KOG0275|consen 234 DGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQ--------CLRRFDRAH 305 (508)
T ss_pred cceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecch--------HHHHhhhhh
Confidence 44667899999999999993 4577889999999999999999999999999999988872 23222 34
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004998 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 656 ~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
...|.|+.||.++ ++|.|+|+|.||||--+.+|+++.+ |+-+.|+++|..|.+.|-|-
T Consensus 306 tkGvt~l~FSrD~-SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDg 370 (508)
T KOG0275|consen 306 TKGVTCLSFSRDN-SQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDG 370 (508)
T ss_pred ccCeeEEEEccCc-chhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCc
Confidence 6679999999965 5899999999999999999999987 88899999999999988774
|
|
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.22 E-value=6.5e-12 Score=128.70 Aligned_cols=206 Identities=18% Similarity=0.158 Sum_probs=139.3
Q ss_pred cccCCCCCceecccceeecCC-CCCcEEEEEec-CCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHHc--Cce
Q 004998 71 LTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEW-GDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHSQ--GIV 143 (720)
Q Consensus 71 Ls~l~HpnIV~l~~~~~~~~~-~~~~~~lv~E~-~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs~--gIv 143 (720)
|-++.|-|||+++..|-.... +...+.++.|| ..|+|.++|+ +.+..+......+|+.||+.||.|||+. -|+
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppii 200 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPII 200 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccc
Confidence 556889999999984432222 34457889999 8999999993 3445588889999999999999999984 699
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
|+++...-|++..+|-+|+- .. .+ |+- +
T Consensus 201 hgnlTc~tifiq~ngLIkig---~~----ap----------------------------------~s~-------h---- 228 (458)
T KOG1266|consen 201 HGNLTCDTIFIQHNGLIKIG---SV----AP----------------------------------DST-------H---- 228 (458)
T ss_pred cCCcchhheeecCCceEEec---cc----Cc----------------------------------ccc-------c----
Confidence 99999999999999988872 11 00 000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....+ +. .+ .....+-++|.|||.-.....+.++|||++|....|
T Consensus 229 ----------------------~s~~~~---~~-~E--------k~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAle 274 (458)
T KOG1266|consen 229 ----------------------PSVNST---RE-AE--------KSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALE 274 (458)
T ss_pred ----------------------hhhhhh---hH-hh--------hhccccCCccccCCcCcccccccchhhhhhhHHHHH
Confidence 000000 00 00 001235678999998766667889999999988888
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|.. |-.+.... ..-..+.. -.+....+..++++.+||+.+|..||+|+++|.||.+-+.
T Consensus 275 mailEiq~tnseS~~-~~ee~ia~----~i~~len~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeV 337 (458)
T KOG1266|consen 275 MAILEIQSTNSESKV-EVEENIAN----VIIGLENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEV 337 (458)
T ss_pred HHHheeccCCCccee-ehhhhhhh----heeeccCccccCcCcccccCCCCCCcchhhhhcCceeeec
Confidence 875 22221110 11111111 1122233444589999999999999999999999987665
|
|
| >KOG0645 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.21 E-value=1.2e-10 Score=115.84 Aligned_cols=108 Identities=13% Similarity=0.218 Sum_probs=86.1
Q ss_pred CCCCCCCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEE--ecCCCCEEEEEEecCCCCEEEEEeCC
Q 004998 602 DLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVE--MASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~i~~v~~~~~~~~~laS~s~D 678 (720)
.+.+|.+.|.+++|+|- |.+|||||.||+||||+.... . ... .... -.|+-.|.+|+|+|+ +++|||||+|
T Consensus 9 ~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~--~--s~~-ck~vld~~hkrsVRsvAwsp~-g~~La~aSFD 82 (312)
T KOG0645|consen 9 KLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSG--D--SWT-CKTVLDDGHKRSVRSVAWSPH-GRYLASASFD 82 (312)
T ss_pred eecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCC--C--cEE-EEEeccccchheeeeeeecCC-CcEEEEeecc
Confidence 45677999999999998 999999999999999997642 0 111 1111 135677999999996 5699999999
Q ss_pred CcEEEEECCCC--cEEEE-------EEEEeecCCceEEEecCccce
Q 004998 679 GVVQVGQVLHL--IYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 679 ~~v~lWDv~tg--~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.|+-||-=..+ +|+.+ |-||+||+.|.++++-|=|+-
T Consensus 83 ~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKS 128 (312)
T KOG0645|consen 83 ATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKS 128 (312)
T ss_pred ceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCe
Confidence 99999976644 45554 899999999999999887764
|
|
| >KOG0302 consensus Ribosome Assembly protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.21 E-value=5.4e-11 Score=122.98 Aligned_cols=107 Identities=16% Similarity=0.205 Sum_probs=82.9
Q ss_pred CCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 602 DLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
-+.+|+.-|-.+.|||..+ .|||||.|++|||||++..-.. ..+..-.|.+.|+-|+||.... +||||+.||+
T Consensus 252 Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~-----~~~~~kAh~sDVNVISWnr~~~-lLasG~DdGt 325 (440)
T KOG0302|consen 252 PFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKK-----AAVSTKAHNSDVNVISWNRREP-LLASGGDDGT 325 (440)
T ss_pred cccccccchhhhccCCccCceEEeeecCceEEEEEecCCCcc-----ceeEeeccCCceeeEEccCCcc-eeeecCCCce
Confidence 4677999999999999775 7999999999999999876211 1222335678999999998665 9999999999
Q ss_pred EEEEECC---CCcEEEE-------EEEEeecC--CceEEEecCccc
Q 004998 681 VQVGQVL---HLIYFSA-------LYCIVLNK--LLIIFRYGMFQE 714 (720)
Q Consensus 681 v~lWDv~---tg~~~~~-------v~~v~~~~--~~~~~~~~~~~~ 714 (720)
++|||++ .|+.+.+ |+||.|+| .+.+-++|.=++
T Consensus 326 ~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~Q 371 (440)
T KOG0302|consen 326 LSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQ 371 (440)
T ss_pred EEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCc
Confidence 9999997 4555555 89999986 444555554433
|
|
| >KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.21 E-value=2.4e-11 Score=136.46 Aligned_cols=128 Identities=10% Similarity=0.141 Sum_probs=104.1
Q ss_pred ccchhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC
Q 004998 576 INPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS 655 (720)
Q Consensus 576 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 655 (720)
|..--++.+++|.|.--..+ ..+..|.+.|..|+|+|++.+|+|||.|.+||||++.+.. |-.+..+|
T Consensus 25 LtslHsG~IQlWDYRM~tli-----~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rr-------clftL~GH 92 (1202)
T KOG0292|consen 25 LTSLHSGVIQLWDYRMGTLI-----DRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRR-------CLFTLLGH 92 (1202)
T ss_pred EEeecCceeeeehhhhhhHH-----hhhhccCCccceeeecCCCCeEEecCCccEEEEEecccce-------ehhhhccc
Confidence 33344556788888422222 2356679999999999999999999999999999997651 23344456
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 656 ~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
-+-|..+.|.+. ..+|.|||.|.||+||+-.+++||.. |.|..|+|.--+|+|+|+|+--
T Consensus 93 lDYVRt~~FHhe-yPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTV 159 (1202)
T KOG0292|consen 93 LDYVRTVFFHHE-YPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTV 159 (1202)
T ss_pred cceeEEeeccCC-CceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceE
Confidence 778999999984 56999999999999999999999987 8999999999999999999853
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.20 E-value=4.2e-11 Score=138.80 Aligned_cols=228 Identities=18% Similarity=0.207 Sum_probs=156.7
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Q 004998 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 70 ~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
++-...||-+++.+. ........+++|+| .|++|...|.+.+ ..+..-++.++..++.+++|||+..++|+|++
T Consensus 857 ~~i~p~~P~v~~~~~----s~~~rsP~~L~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~ 931 (1205)
T KOG0606|consen 857 ILITPRSPAVVRSFP----SFPCRSPLPLVGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLHSSLRKHRDLK 931 (1205)
T ss_pred ccccCCCCceecccC----CCCCCCCcchhhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccccchhhccccc
Confidence 333345677777666 23333467999999 8999999886655 37788888899999999999999999999999
Q ss_pred CCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccc-ccccCCCCCCccccccc
Q 004998 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL-QLVTAPTNDLSEASCMQ 227 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df-gla~~~~~~~~~~~~~q 227 (720)
|.|+++..+++.++.+||+....|.-... .+. |..+.....+
T Consensus 932 p~~~l~~~~gh~~l~~~~t~~~vg~~~p~------------------------------~~~sg~~~~~~~~~------- 974 (1205)
T KOG0606|consen 932 PDSLLIAYDGHRPLTDFGTLSKVGLIPPT------------------------------TDLSGPSSSGTPRR------- 974 (1205)
T ss_pred ccchhhcccCCcccCccccccccccccCc------------------------------CCcccccccCcccc-------
Confidence 99999999999999999966443322111 011 0000000000
Q ss_pred CCCccccccccccccccccccccccchhhhhcccCCCC----ccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 228 SSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFP----MKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~----~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
+. . ..+....+ .+....+||+.|.+||.+.+...+..+|+|++|++++|
T Consensus 975 ----~~------~-----------------~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e 1027 (1205)
T KOG0606|consen 975 ----LS------R-----------------SERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFE 1027 (1205)
T ss_pred ----cc------c-----------------cccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhh
Confidence 00 0 00000000 01123589999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCC-ccccccC-chHHHHHHHcCCCCCCCCCChH---HHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKF-PKEASFCLWLLHPEPSGRPKMG---ELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p-~~~~~~~-p~~~~li~~~L~~dP~~Rpta~---eiL~hp~~~~~ 367 (720)
.++ ||.... .......+..+..| +.-.... +...+++..+|..+|.+|..+. ++-.|+||+..
T Consensus 1028 ~l~g~pp~na~t-pq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1028 VLTGIPPFNAET-PQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDV 1098 (1205)
T ss_pred hhcCCCCCCCcc-hhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCC
Confidence 999 444433 33555555554433 3222333 3344999999999999998766 88899999987
|
|
| >KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.19 E-value=3.2e-11 Score=125.69 Aligned_cols=102 Identities=8% Similarity=0.019 Sum_probs=79.9
Q ss_pred hhhhhhccccceEEeeeec---cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC
Q 004998 581 EGLCKYLSFSKLRVKADLN---QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS 657 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~---~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 657 (720)
+.++++...++++++.... ...|.||.--|.||+|+|.--+||+||.|..||+||.+++. |-.....|++
T Consensus 193 skF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~-------cl~tlh~HKn 265 (464)
T KOG0284|consen 193 SKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGS-------CLATLHGHKN 265 (464)
T ss_pred ceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcc-------hhhhhhhccc
Confidence 4467788888999999887 36789999999999999999999999999999999998862 1112223466
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCc
Q 004998 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLI 690 (720)
Q Consensus 658 ~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~ 690 (720)
.|..|.|+|++ ++|+|+|.|.+++|.|+++-+
T Consensus 266 tVl~~~f~~n~-N~Llt~skD~~~kv~DiR~mk 297 (464)
T KOG0284|consen 266 TVLAVKFNPNG-NWLLTGSKDQSCKVFDIRTMK 297 (464)
T ss_pred eEEEEEEcCCC-CeeEEccCCceEEEEehhHhH
Confidence 67777777754 777777777777777777443
|
|
| >KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.18 E-value=8.4e-11 Score=124.39 Aligned_cols=99 Identities=13% Similarity=0.131 Sum_probs=79.5
Q ss_pred hhhhccccceEEeeee----c-cCCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCC
Q 004998 583 LCKYLSFSKLRVKADL----N-QGDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR 656 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l----~-~~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 656 (720)
++.....++|.++.+- + +.....|++.|+||+|+|-+. +|||||.||+|++||++.... ++.....|.
T Consensus 243 F~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~------~lh~~e~H~ 316 (422)
T KOG0264|consen 243 FGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNK------PLHTFEGHE 316 (422)
T ss_pred heeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhccc------CceeccCCC
Confidence 3455556666665544 2 356678899999999999766 599999999999999988731 233445668
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004998 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 657 ~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~ 687 (720)
..|.+|.|||+...+|||++.|+.+.|||+.
T Consensus 317 dev~~V~WSPh~etvLASSg~D~rl~vWDls 347 (422)
T KOG0264|consen 317 DEVFQVEWSPHNETVLASSGTDRRLNVWDLS 347 (422)
T ss_pred cceEEEEeCCCCCceeEecccCCcEEEEecc
Confidence 8999999999999999999999999999985
|
|
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.3e-10 Score=123.86 Aligned_cols=121 Identities=17% Similarity=0.215 Sum_probs=101.4
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCC
Q 004998 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 658 (720)
.+...+||.-++.-|.++| .+|++.|.|.+|+|... +++|||-|++||+||.++.. .++.++.|..+
T Consensus 131 Dd~v~k~~d~s~a~v~~~l-----~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~-------~~v~elnhg~p 198 (487)
T KOG0310|consen 131 DDKVVKYWDLSTAYVQAEL-----SGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLT-------SRVVELNHGCP 198 (487)
T ss_pred CCceEEEEEcCCcEEEEEe-----cCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCC-------ceeEEecCCCc
Confidence 4456788888887775555 56799999999999765 89999999999999987652 47788999999
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEE--------EEEEEEeecCCceEEEecCccc
Q 004998 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYF--------SALYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 659 i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~--------~~v~~v~~~~~~~~~~~~~~~~ 714 (720)
|..|++=| .+++||||+ ...|||||+.+|..+ ++|+|..++..+..+.+|++|-
T Consensus 199 Ve~vl~lp-sgs~iasAg-Gn~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~ 260 (487)
T KOG0310|consen 199 VESVLALP-SGSLIASAG-GNSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDR 260 (487)
T ss_pred eeeEEEcC-CCCEEEEcC-CCeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeeccccc
Confidence 99999999 457999998 579999999977543 3499999999999999999984
|
|
| >KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.18 E-value=9.4e-11 Score=130.08 Aligned_cols=100 Identities=6% Similarity=0.066 Sum_probs=85.1
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
.|.-.|+||+.+|+.++|||||.||+.|||++.... -+..+ +|+-.|.||.|+|++ +.|||||.|+||||
T Consensus 461 aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~--------l~~vLsGH~RGvw~V~Fs~~d-q~laT~SgD~TvKI 531 (775)
T KOG0319|consen 461 AHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLR--------LLGVLSGHTRGVWCVSFSKND-QLLATCSGDKTVKI 531 (775)
T ss_pred hhcccccceEecCCCceEEecccccceeeecccCce--------EEEEeeCCccceEEEEecccc-ceeEeccCCceEEE
Confidence 457889999999999999999999999999987431 22333 457789999999975 59999999999999
Q ss_pred EECCCCcEEEE-------EEEEeecCCceEEEecCcc
Q 004998 684 GQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 684 WDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
|.+.+..|++| |..+.|-..+..+.|+--|
T Consensus 532 W~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~ad 568 (775)
T KOG0319|consen 532 WSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGAD 568 (775)
T ss_pred EEeccceeeeeecCccceeEeeeeeeCCcEEEeccCC
Confidence 99999999998 7888998888888876555
|
|
| >KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.6e-10 Score=123.11 Aligned_cols=106 Identities=11% Similarity=0.109 Sum_probs=87.5
Q ss_pred CCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
+..|...|..+.|+|++ ++|++||.|+.+++||+.+. +-..++ +|++-|.|.+|+|-..++++||||||+
T Consensus 106 ~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a--------~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~ 177 (487)
T KOG0310|consen 106 LYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTA--------YVQAELSGHTDYVRCGDISPANDHIVVTGSYDGK 177 (487)
T ss_pred HhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCc--------EEEEEecCCcceeEeeccccCCCeEEEecCCCce
Confidence 45679999999999855 67999999999999998876 223344 458889999999988889999999999
Q ss_pred EEEEECCCC-cEEEE------EEEEeecCCceEEEecCccceE
Q 004998 681 VQVGQVLHL-IYFSA------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWDv~tg-~~~~~------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
||+||.++- ..+.+ |.+|.|=|.|+.|++..=-+||
T Consensus 178 vrl~DtR~~~~~v~elnhg~pVe~vl~lpsgs~iasAgGn~vk 220 (487)
T KOG0310|consen 178 VRLWDTRSLTSRVVELNHGCPVESVLALPSGSLIASAGGNSVK 220 (487)
T ss_pred EEEEEeccCCceeEEecCCCceeeEEEcCCCCEEEEcCCCeEE
Confidence 999999977 56666 8889998888888876555554
|
|
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=4.3e-11 Score=120.57 Aligned_cols=98 Identities=16% Similarity=0.227 Sum_probs=80.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..+.|++|..... ++.+.. ..+++||| .|++|.+++.... . ....++.+|+.+|.++|+.|
T Consensus 45 ~~~~E~~~l~~l~~~~i~~p~~-~~~~~~---~~~lv~e~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~ 115 (211)
T PRK14879 45 RTRREARIMSRARKAGVNVPAV-YFVDPE---NFIIVMEYIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAG 115 (211)
T ss_pred HHHHHHHHHHHHHHCCCCCCeE-EEEeCC---CCEEEEEEeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCC
Confidence 3447778889999999866555 332322 35899999 8999999985422 2 88899999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccC
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
++|+|++|.|||++ ++.++++|||.+..
T Consensus 116 i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 116 IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999999998 78999999998843
|
|
| >KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.9e-11 Score=119.17 Aligned_cols=109 Identities=10% Similarity=0.148 Sum_probs=88.9
Q ss_pred CCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
+..|+..+.|+.|+... .++||||+|+.||+||++... .|+.++.+ .-.|..|.|||++.++|||||||.|
T Consensus 186 i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r-------~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDmT 258 (311)
T KOG0277|consen 186 IEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLR-------TPLFELNGHGLAVRKVKFSPHHASLLASASYDMT 258 (311)
T ss_pred EEeccceeEeecccccCCcEEEecCCCceEEEEehhhcc-------ccceeecCCceEEEEEecCcchhhHhhhccccce
Confidence 45568899999999865 579999999999999998762 47777644 5679999999999999999999999
Q ss_pred EEEEECCCCcEEEE--------EEEEeecCC-ceEEEecCccceEEc
Q 004998 681 VQVGQVLHLIYFSA--------LYCIVLNKL-LIIFRYGMFQEVKYL 718 (720)
Q Consensus 681 v~lWDv~tg~~~~~--------v~~v~~~~~-~~~~~~~~~~~~~~~ 718 (720)
+||||...+....+ |..++||.. ..++++...||..|.
T Consensus 259 ~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~V 305 (311)
T KOG0277|consen 259 VRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYV 305 (311)
T ss_pred EEecccccchhhhhhhhccceEEeccccccccCceeeecccccceee
Confidence 99999986654332 667788765 457888888887764
|
|
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.3e-10 Score=112.67 Aligned_cols=85 Identities=7% Similarity=0.100 Sum_probs=71.6
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
+..|.+.+..|-||||++||||+|.|+++|||+....+. ..++.-+|...+..++||.+ +.+|++|+.|+++|
T Consensus 211 ~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~k------le~~l~gh~rWvWdc~FS~d-g~YlvTassd~~~r 283 (311)
T KOG0315|consen 211 FQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFK------LELVLTGHQRWVWDCAFSAD-GEYLVTASSDHTAR 283 (311)
T ss_pred eecccceEEEEEECCCCcEEEeecCCceEEEEecCCcee------eEEEeecCCceEEeeeeccC-ccEEEecCCCCcee
Confidence 445689999999999999999999999999999876521 22333455778999999995 56999999999999
Q ss_pred EEECCCCcEEEE
Q 004998 683 VGQVLHLIYFSA 694 (720)
Q Consensus 683 lWDv~tg~~~~~ 694 (720)
+||+..|+.++.
T Consensus 284 lW~~~~~k~v~q 295 (311)
T KOG0315|consen 284 LWDLSAGKEVRQ 295 (311)
T ss_pred ecccccCceeee
Confidence 999999998875
|
|
| >KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.14 E-value=1.5e-10 Score=127.31 Aligned_cols=84 Identities=13% Similarity=0.266 Sum_probs=74.2
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccce-EEecCCCCEEEEEEecCCCCEEEEEe--CCC
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPV-VEMASRSKLSSICWNSYIKSQIASSN--FEG 679 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~i~~v~~~~~~~~~laS~s--~D~ 679 (720)
+.+|...|+.++|++|+.+||+||.|.++.|||.... .|+ ....|++.|..++|+|...++||||+ .|+
T Consensus 297 ~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~--------~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~ 368 (484)
T KOG0305|consen 297 LQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSP--------EPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADR 368 (484)
T ss_pred hhcccceeeeeEECCCCCeeccCCCccceEeccCCCc--------cccEEEeccceeeeEeeeCCCccCceEEcCCCccc
Confidence 7789999999999999999999999999999997433 244 34467889999999999999999987 699
Q ss_pred cEEEEECCCCcEEEE
Q 004998 680 VVQVGQVLHLIYFSA 694 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~ 694 (720)
+|++||+.+|+.+..
T Consensus 369 ~i~fwn~~~g~~i~~ 383 (484)
T KOG0305|consen 369 CIKFWNTNTGARIDS 383 (484)
T ss_pred EEEEEEcCCCcEecc
Confidence 999999999998875
|
|
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.14 E-value=4.5e-11 Score=122.92 Aligned_cols=102 Identities=13% Similarity=0.049 Sum_probs=77.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-c
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG-I 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g-I 142 (720)
++|..++.++.+. ++.+.. .+... ..++|||| .|.+|..++... ..+...++..++.||+.+|.+||++| |
T Consensus 98 ~~E~~~L~~L~~~-~i~~p~-~~~~~----~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~g~i 170 (237)
T smart00090 98 EKEFRNLQRLYEA-GVPVPK-PIAWR----RNVLVMEFIGGDGLPAPRLKD-VEPEEEEEFELYDDILEEMRKLYKEGEL 170 (237)
T ss_pred HHHHHHHHHHHhc-CCCCCe-eeEec----CceEEEEEecCCccccccccc-CCcchHHHHHHHHHHHHHHHHHHhcCCE
Confidence 4677788888753 333222 12122 23799999 777887665222 23667778899999999999999999 9
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCC
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSD 174 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~ 174 (720)
+||||||+||+++ ++.++++|||.+...+.+
T Consensus 171 iH~Dikp~NIli~-~~~i~LiDFg~a~~~~~~ 201 (237)
T smart00090 171 VHGDLSEYNILVH-DGKVVIIDVSQSVELDHP 201 (237)
T ss_pred EeCCCChhhEEEE-CCCEEEEEChhhhccCCc
Confidence 9999999999998 889999999999765554
|
|
| >KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.13 E-value=2.2e-10 Score=113.06 Aligned_cols=118 Identities=10% Similarity=0.147 Sum_probs=91.7
Q ss_pred cceEEeeeec-c--CCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEe
Q 004998 590 SKLRVKADLN-Q--GDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWN 665 (720)
Q Consensus 590 ~~~~~~~~l~-~--~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~ 665 (720)
.++|+++..+ . ..+.||.+.|...+|+| .+.+||++|.|++++|||++..- .+.....|...|.|+-||
T Consensus 127 ~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~g-------k~~~i~ah~~Eil~cdw~ 199 (311)
T KOG0277|consen 127 GTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPG-------KFMSIEAHNSEILCCDWS 199 (311)
T ss_pred CceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCC-------ceeEEEeccceeEeeccc
Confidence 4566666655 2 34778999999999998 66799999999999999986541 234433456789999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCc-EEEE-------EEEEeecCCc-eEEEecCccc
Q 004998 666 SYIKSQIASSNFEGVVQVGQVLHLI-YFSA-------LYCIVLNKLL-IIFRYGMFQE 714 (720)
Q Consensus 666 ~~~~~~laS~s~D~~v~lWDv~tg~-~~~~-------v~~v~~~~~~-~~~~~~~~~~ 714 (720)
.|+.++||+|+-|+.||+||++.-+ .+.+ |..|.|||-- +++++.|+|=
T Consensus 200 ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph~~~lLaSasYDm 257 (311)
T KOG0277|consen 200 KYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPHHASLLASASYDM 257 (311)
T ss_pred ccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcchhhHhhhccccc
Confidence 9999999999999999999997533 3433 8889998864 5667777763
|
|
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.13 E-value=7e-11 Score=136.19 Aligned_cols=94 Identities=18% Similarity=0.225 Sum_probs=78.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
|..+|..++..++|++|+..+. +..... ..++|||| .|++|.+++. ....++.||+.+|.+||+.|
T Consensus 382 ~~~~E~~~l~~l~~~~i~~p~~-~~~~~~---~~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~g 448 (535)
T PRK09605 382 RTRAEARLLSEARRAGVPTPVI-YDVDPE---EKTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAG 448 (535)
T ss_pred HHHHHHHHHHhhcccCCCeeEE-EEEeCC---CCEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999987655 232322 35899999 9999999884 45789999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccC
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
|+||||||+|||+ .++.++++|||+++.
T Consensus 449 iiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 449 IVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 9999999999999 678999999999854
|
|
| >KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.13 E-value=2e-10 Score=132.69 Aligned_cols=112 Identities=13% Similarity=0.193 Sum_probs=90.7
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCc-----cccc-----ccccccce-EEecCCCCEEEEEEecCCCCE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA-----IINE-----NRDIHYPV-VEMASRSKLSSICWNSYIKSQ 671 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~-----~~~~-----~~~~~~~~-~~~~~~~~i~~v~~~~~~~~~ 671 (720)
...|.+-|+||.|+|||+|||+||.|+-|.||+... ..+. .+.-...+ ....|.+.|..|+|+|+ ..+
T Consensus 65 m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~-~~~ 143 (942)
T KOG0973|consen 65 MDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPD-DSL 143 (942)
T ss_pred eccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCC-ccE
Confidence 344589999999999999999999999999999873 1111 01111122 23457889999999995 569
Q ss_pred EEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 672 IASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 672 laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|||+|.|++|-|||..|..++.. |-.|.|.|.|.++++-+.|.-
T Consensus 144 lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrt 194 (942)
T KOG0973|consen 144 LVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRT 194 (942)
T ss_pred EEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCce
Confidence 99999999999999999987776 789999999999999999863
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=5.3e-10 Score=135.06 Aligned_cols=104 Identities=9% Similarity=0.088 Sum_probs=85.8
Q ss_pred CCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+|+|+| ++.+|||||.|++|+|||+.+. .++..+.++..|.++.|++..+.+||+|+.||+|
T Consensus 571 ~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~--------~~~~~~~~~~~v~~v~~~~~~g~~latgs~dg~I 642 (793)
T PLN00181 571 MKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQG--------VSIGTIKTKANICCVQFPSESGRSLAFGSADHKV 642 (793)
T ss_pred ecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCC--------cEEEEEecCCCeEEEEEeCCCCCEEEEEeCCCeE
Confidence 456789999999996 8899999999999999998765 2344455567899999987778899999999999
Q ss_pred EEEECCCCc-EEEE-------EEEEeecCCceEEEecCccce
Q 004998 682 QVGQVLHLI-YFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWDv~tg~-~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
++||+++++ .+.+ |.++.|. .+..+++|+.|..
T Consensus 643 ~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ 683 (793)
T PLN00181 643 YYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNT 683 (793)
T ss_pred EEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCE
Confidence 999998765 3332 8999997 5678888988864
|
|
| >KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.12 E-value=6.3e-11 Score=116.47 Aligned_cols=95 Identities=16% Similarity=0.218 Sum_probs=79.6
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
.|.++|.+|+|+.|.++|.|||.+|-+||||++... .|..++. |.+.|..+-|-.-+ +.|.|+++|++||+
T Consensus 98 ~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~-------App~E~~ghtg~Ir~v~wc~eD-~~iLSSadd~tVRL 169 (334)
T KOG0278|consen 98 EHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPK-------APPKEISGHTGGIRTVLWCHED-KCILSSADDKTVRL 169 (334)
T ss_pred hhhheeeeEEecccchhhhccchHHHhhhhhccCCC-------CCchhhcCCCCcceeEEEeccC-ceEEeeccCCceEE
Confidence 458999999999999999999999999999987763 3555554 47889999998744 57888899999999
Q ss_pred EECCCCcEEEE------EEEEeecCCceEE
Q 004998 684 GQVLHLIYFSA------LYCIVLNKLLIIF 707 (720)
Q Consensus 684 WDv~tg~~~~~------v~~v~~~~~~~~~ 707 (720)
||.+||+.+++ |.+.-.++.|-++
T Consensus 170 WD~rTgt~v~sL~~~s~VtSlEvs~dG~il 199 (334)
T KOG0278|consen 170 WDHRTGTEVQSLEFNSPVTSLEVSQDGRIL 199 (334)
T ss_pred EEeccCcEEEEEecCCCCcceeeccCCCEE
Confidence 99999999887 6677777776554
|
|
| >KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.11 E-value=4.6e-10 Score=119.07 Aligned_cols=123 Identities=15% Similarity=0.227 Sum_probs=103.8
Q ss_pred cchhhhhhhhccccceEEeeeec---cCCCCCCCCCeEEEEECCCC---------CEEEEeeCCCcEEEeeCCccccccc
Q 004998 577 NPFLEGLCKYLSFSKLRVKADLN---QGDLLNSSNLVCSLSFDRDG---------ELFAAAGVNKKIKVFECDAIINENR 644 (720)
Q Consensus 577 ~~~~~~l~~~~~~~~~~~~~~l~---~~~~~~~~~~V~sv~f~~dg---------~~lat~~~d~~i~iwd~~~~~~~~~ 644 (720)
++-...|.......+||++..-. -.||..|+-.|.++.|+|+| ..+|+++.|.+|++||...+.
T Consensus 368 n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv---- 443 (524)
T KOG0273|consen 368 NPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGV---- 443 (524)
T ss_pred CCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCc----
Confidence 33345678888899999998555 36899999999999999876 368999999999999987773
Q ss_pred ccccce-EEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEE
Q 004998 645 DIHYPV-VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFR 708 (720)
Q Consensus 645 ~~~~~~-~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~ 708 (720)
|+ ..|.|+.+|++|+|+|+ +.+||||+.||.|.+|+..+|+.+++ |+.+.||..|..+.
T Consensus 444 ----~i~~f~kH~~pVysvafS~~-g~ylAsGs~dg~V~iws~~~~~l~~s~~~~~~Ifel~Wn~~G~kl~ 509 (524)
T KOG0273|consen 444 ----PIHTLMKHQEPVYSVAFSPN-GRYLASGSLDGCVHIWSTKTGKLVKSYQGTGGIFELCWNAAGDKLG 509 (524)
T ss_pred ----eeEeeccCCCceEEEEecCC-CcEEEecCCCCeeEeccccchheeEeecCCCeEEEEEEcCCCCEEE
Confidence 45 45688999999999996 56999999999999999999999987 78999998886654
|
|
| >KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.10 E-value=4e-10 Score=110.93 Aligned_cols=98 Identities=9% Similarity=0.145 Sum_probs=80.5
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
.+.+|+.-|.+|.|..||+...|||.|+++||||++.. ..-..+.+.+.|++|+.+|+. ..|.||+.+|-|
T Consensus 78 t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~--------~~qR~~~~~spVn~vvlhpnQ-teLis~dqsg~i 148 (311)
T KOG0315|consen 78 TFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSL--------SCQRNYQHNSPVNTVVLHPNQ-TELISGDQSGNI 148 (311)
T ss_pred EEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCc--------ccchhccCCCCcceEEecCCc-ceEEeecCCCcE
Confidence 35677888999999999999999999999999999875 123456678999999999965 479999999999
Q ss_pred EEEECCCCcEEEE--------EEEEeecCCceEEE
Q 004998 682 QVGQVLHLIYFSA--------LYCIVLNKLLIIFR 708 (720)
Q Consensus 682 ~lWDv~tg~~~~~--------v~~v~~~~~~~~~~ 708 (720)
+|||+.+..|..+ |.+++..++|+...
T Consensus 149 rvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~ 183 (311)
T KOG0315|consen 149 RVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLA 183 (311)
T ss_pred EEEEccCCccccccCCCCCcceeeEEEcCCCcEEE
Confidence 9999998876554 66776666665543
|
|
| >KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown] | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.5e-10 Score=123.75 Aligned_cols=112 Identities=17% Similarity=0.380 Sum_probs=83.2
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccc--------ccc------cccce-----------------
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINE--------NRD------IHYPV----------------- 650 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~--------~~~------~~~~~----------------- 650 (720)
.|.||+-+|++++++|.|..|+|||.|-+|+.|||+-.... +.+ +.|++
T Consensus 162 ~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~ 241 (641)
T KOG0772|consen 162 QLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLL 241 (641)
T ss_pred eccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEE
Confidence 45678999999999999999999999999999998741000 000 00111
Q ss_pred -------E----------Ee----cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCc----EEEE---------EE
Q 004998 651 -------V----------EM----ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLI----YFSA---------LY 696 (720)
Q Consensus 651 -------~----------~~----~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~----~~~~---------v~ 696 (720)
. .| +|...|+|.||+|..++.+.|+++|||+|||||..-+ .+.+ +.
T Consensus 242 DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~t 321 (641)
T KOG0772|consen 242 DRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVT 321 (641)
T ss_pred ccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCce
Confidence 0 11 2344579999999999999999999999999997443 3333 78
Q ss_pred EEeecCCceEEEecCcc
Q 004998 697 CIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 697 ~v~~~~~~~~~~~~~~~ 713 (720)
+++||+.+..|+.|-.|
T Consensus 322 sC~~nrdg~~iAagc~D 338 (641)
T KOG0772|consen 322 SCAWNRDGKLIAAGCLD 338 (641)
T ss_pred eeecCCCcchhhhcccC
Confidence 99999999988765443
|
|
| >KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.6e-10 Score=120.75 Aligned_cols=107 Identities=10% Similarity=0.181 Sum_probs=83.4
Q ss_pred CCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccce-EEecCCCCEEEEEEecCCCCEEEEEeCC
Q 004998 601 GDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPV-VEMASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~i~~v~~~~~~~~~laS~s~D 678 (720)
..+.+|...|..|+|++-. .+|+++|.|+++.|||.++... .|. ..-.|.+.|.||+|||++..+|||||.|
T Consensus 221 ~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~------~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D 294 (422)
T KOG0264|consen 221 TIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTS------KPSHSVKAHSAEVNCVAFNPFNEFILATGSAD 294 (422)
T ss_pred EEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCC------CCcccccccCCceeEEEeCCCCCceEEeccCC
Confidence 3466789999999999855 6899999999999999986211 122 2234588999999999999999999999
Q ss_pred CcEEEEECCCC-cEEEE-------EEEEeecCCce-EEEecCcc
Q 004998 679 GVVQVGQVLHL-IYFSA-------LYCIVLNKLLI-IFRYGMFQ 713 (720)
Q Consensus 679 ~~v~lWDv~tg-~~~~~-------v~~v~~~~~~~-~~~~~~~~ 713 (720)
++|+|||+|.- +++.+ |++|-|+|-.- ++++..+|
T Consensus 295 ~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D 338 (422)
T KOG0264|consen 295 KTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTD 338 (422)
T ss_pred CcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccC
Confidence 99999999843 34544 99999998654 34444444
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.1e-10 Score=116.40 Aligned_cols=95 Identities=14% Similarity=0.181 Sum_probs=74.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
|..+|..++..+.|+++..... ++.... ..+++||| .|++|.+++..... .++.||+.+|.+||+.|
T Consensus 43 ~~~~E~~~l~~l~~~~i~~p~~-~~~~~~---~~~lv~e~~~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH~~g 110 (199)
T TIGR03724 43 RTRNEARLLSRARKAGVNTPVV-YDVDPD---NKTIVMEYIEGKPLKDVIEEGND--------ELLREIGRLVGKLHKAG 110 (199)
T ss_pred HHHHHHHHHHHHHHCCCCCCEE-EEEECC---CCEEEEEEECCccHHHHHhhcHH--------HHHHHHHHHHHHHHHCC
Confidence 3447888888888887543332 122222 35899999 99999998843221 78999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccC
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSD 170 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~ 170 (720)
++|+|++|.||+++ ++.++++|||.+..
T Consensus 111 i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 111 IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999999999998 89999999998743
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >KOG0282 consensus mRNA splicing factor [Function unknown] | Back alignment and domain information |
|---|
Probab=99.08 E-value=8.8e-11 Score=124.89 Aligned_cols=126 Identities=10% Similarity=0.089 Sum_probs=104.0
Q ss_pred ccchhhhhhhhcc-ccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec
Q 004998 576 INPFLEGLCKYLS-FSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA 654 (720)
Q Consensus 576 ~~~~~~~l~~~~~-~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 654 (720)
|..+.+++.++|. |..-+.+ .++.||+-.|.+++|+.+|..|.|||.|+.||+||.+++ ..+..+.
T Consensus 231 LS~gmD~~vklW~vy~~~~~l-----rtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG--------~~~~~f~ 297 (503)
T KOG0282|consen 231 LSGGMDGLVKLWNVYDDRRCL-----RTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETG--------QVLSRFH 297 (503)
T ss_pred EecCCCceEEEEEEecCccee-----hhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccc--------eEEEEEe
Confidence 5566666666655 2222222 346788999999999999999999999999999999998 3455666
Q ss_pred CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004998 655 SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 655 ~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
....+.||.|.|++.+.+.+|..|+.|+.||+++|+.+++ |..|.|=+.+..+++.|=|.
T Consensus 298 ~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdk 364 (503)
T KOG0282|consen 298 LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDK 364 (503)
T ss_pred cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCc
Confidence 6677899999998878999999999999999999998776 89999999999999887665
|
|
| >KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.08 E-value=3.6e-10 Score=114.15 Aligned_cols=110 Identities=10% Similarity=0.116 Sum_probs=92.3
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
|-.|...|++++|+|-..+|++|+.|++||+||+.... ++.....++....|.|++|.| .+.+|+.|-.-.+++
T Consensus 168 lYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~s-----aKrA~K~~qd~~~vrsiSfHP-sGefllvgTdHp~~r 241 (430)
T KOG0640|consen 168 LYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTS-----AKRAFKVFQDTEPVRSISFHP-SGEFLLVGTDHPTLR 241 (430)
T ss_pred hhhccCcccceeecchhheEEeccCCCeEEEEecccHH-----HHHHHHHhhccceeeeEeecC-CCceEEEecCCCcee
Confidence 45679999999999999999999999999999997641 112223344456799999999 667999998889999
Q ss_pred EEECCCCcEEEE----------EEEEeecCCceEEEecCccceEEc
Q 004998 683 VGQVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 683 lWDv~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
|+||+|-||... |.||.+|+.++++++||.|-...|
T Consensus 242 lYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~Ikl 287 (430)
T KOG0640|consen 242 LYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKL 287 (430)
T ss_pred EEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEe
Confidence 999999999875 999999999999999999865443
|
|
| >KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.07 E-value=1.1e-09 Score=109.01 Aligned_cols=134 Identities=15% Similarity=0.165 Sum_probs=110.3
Q ss_pred hhhhhhccccceEEeeeec---cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccc--------------
Q 004998 581 EGLCKYLSFSKLRVKADLN---QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN-------------- 643 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~---~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~-------------- 643 (720)
+.|-.+...++..|+-.+. -|.+.||++.|.||+.+.+.+++.||+.|.++|+||+.++....
T Consensus 23 DLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~ 102 (327)
T KOG0643|consen 23 DLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFS 102 (327)
T ss_pred cEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeec
Confidence 4467788899999999988 38999999999999999999999999999999999987731100
Q ss_pred -------------------------------cccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcE
Q 004998 644 -------------------------------RDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIY 691 (720)
Q Consensus 644 -------------------------------~~~~~~~~~~~~-~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~ 691 (720)
.+...|+..+.+ .++++..-|+|- +..|++|..||.|..||+++|+.
T Consensus 103 ~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l-~~~ii~Ghe~G~is~~da~~g~~ 181 (327)
T KOG0643|consen 103 FGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPL-GETIIAGHEDGSISIYDARTGKE 181 (327)
T ss_pred cCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeeccc-CCEEEEecCCCcEEEEEcccCce
Confidence 012234544433 788999999995 46999999999999999999966
Q ss_pred EEE--------EEEEeecCCceEEEecCccce
Q 004998 692 FSA--------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 692 ~~~--------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+.. ++.+.|+++..++.+||=|.-
T Consensus 182 ~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dtt 213 (327)
T KOG0643|consen 182 LVDSDEEHSSKINDLQFSRDRTYFITGSKDTT 213 (327)
T ss_pred eeechhhhccccccccccCCcceEEecccCcc
Confidence 543 899999999999999998754
|
|
| >KOG1407 consensus WD40 repeat protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.06 E-value=6.9e-10 Score=110.06 Aligned_cols=113 Identities=13% Similarity=0.246 Sum_probs=92.2
Q ss_pred hhhccccceEEeeeec-cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEE
Q 004998 584 CKYLSFSKLRVKADLN-QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSS 661 (720)
Q Consensus 584 ~~~~~~~~~~~~~~l~-~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~ 661 (720)
.....|-.||++.+++ | ..---||+|+|+|+|||+||.|-.+-+||+...+ ++..++ ..-+|..
T Consensus 171 v~ILsypsLkpv~si~AH------~snCicI~f~p~GryfA~GsADAlvSLWD~~ELi--------C~R~isRldwpVRT 236 (313)
T KOG1407|consen 171 VEILSYPSLKPVQSIKAH------PSNCICIEFDPDGRYFATGSADALVSLWDVDELI--------CERCISRLDWPVRT 236 (313)
T ss_pred EEEEeccccccccccccC------CcceEEEEECCCCceEeeccccceeeccChhHhh--------hheeeccccCceEE
Confidence 4456777888888887 5 5556789999999999999999999999986652 223332 2557999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecC
Q 004998 662 ICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 662 v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~ 711 (720)
|+||- ++.+|||||.|-.|-|=+|.||..+.+ .++|+|+|.-.+++|.-
T Consensus 237 lSFS~-dg~~lASaSEDh~IDIA~vetGd~~~eI~~~~~t~tVAWHPk~~LLAyA~ 291 (313)
T KOG1407|consen 237 LSFSH-DGRMLASASEDHFIDIAEVETGDRVWEIPCEGPTFTVAWHPKRPLLAYAC 291 (313)
T ss_pred EEecc-CcceeeccCccceEEeEecccCCeEEEeeccCCceeEEecCCCceeeEEe
Confidence 99996 567999999999999999999988876 58899999988888753
|
|
| >KOG1273 consensus WD40 repeat protein [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.05 E-value=5e-10 Score=113.50 Aligned_cols=85 Identities=14% Similarity=0.250 Sum_probs=70.7
Q ss_pred eEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 004998 610 VCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLH 688 (720)
Q Consensus 610 V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~t 688 (720)
-.||.|++-|.+||.|..||.|-|||+.|.. +-..+ .|--+|+|||||+++ ..|.|+|.|..|++||+..
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~--------iar~lsaH~~pi~sl~WS~dg-r~LltsS~D~si~lwDl~~ 96 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFR--------IARMLSAHVRPITSLCWSRDG-RKLLTSSRDWSIKLWDLLK 96 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccc--------hhhhhhccccceeEEEecCCC-CEeeeecCCceeEEEeccC
Confidence 6899999999999999999999999998862 11111 235689999999965 5899999999999999999
Q ss_pred CcEEEE------EEEEeecCC
Q 004998 689 LIYFSA------LYCIVLNKL 703 (720)
Q Consensus 689 g~~~~~------v~~v~~~~~ 703 (720)
|.+++. ||.+-|+|-
T Consensus 97 gs~l~rirf~spv~~~q~hp~ 117 (405)
T KOG1273|consen 97 GSPLKRIRFDSPVWGAQWHPR 117 (405)
T ss_pred CCceeEEEccCccceeeeccc
Confidence 999887 677777553
|
|
| >KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.3e-09 Score=118.86 Aligned_cols=119 Identities=9% Similarity=0.044 Sum_probs=95.8
Q ss_pred hhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEE
Q 004998 584 CKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSIC 663 (720)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~ 663 (720)
.+.-.|++++-+.+.. .|+..|.||+-+|.--++.|+|.|.+||+||+... +. |....-+|..-|.+|+
T Consensus 79 IrVfnynt~ekV~~Fe-----AH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~-wa-----~~qtfeGH~HyVMqv~ 147 (794)
T KOG0276|consen 79 IRVFNYNTGEKVKTFE-----AHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENE-WA-----CEQTFEGHEHYVMQVA 147 (794)
T ss_pred EEEEecccceeeEEee-----ccccceeeeeecCCCCeEEecCCccEEEEeeccCc-ee-----eeeEEcCcceEEEEEE
Confidence 4555677777777765 34889999999999999999999999999999765 11 2222334567799999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCc--eEEEecCcc
Q 004998 664 WNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLL--IIFRYGMFQ 713 (720)
Q Consensus 664 ~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~--~~~~~~~~~ 713 (720)
|||.+.+.+||||-|+|||||.+.+..+.-| |+||+|=+.+ -++.+|+=|
T Consensus 148 fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD 206 (794)
T KOG0276|consen 148 FNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADD 206 (794)
T ss_pred ecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCC
Confidence 9999999999999999999999988777665 9999996555 577777755
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 720 | ||||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 8e-13 | ||
| 3qd2_B | 332 | Crsytal Structure Of Mouse Perk Kinase Domain Lengt | 3e-11 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 2e-04 | ||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 2e-04 |
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 720 | |||
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 3e-23 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 7e-20 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 1e-15 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 6e-14 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 3e-11 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-04 | |
| 4apc_A | 350 | Serine/threonine-protein kinase NEK1; transferase; | 8e-10 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 3e-09 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 9e-09 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 1e-08 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 2e-07 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 5e-07 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 8e-07 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 1e-06 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 2e-06 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 3e-06 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 3e-06 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 3e-06 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 4e-06 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 6e-06 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 1e-05 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 1e-05 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 2e-05 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 6e-05 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 9e-05 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 2e-04 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 2e-04 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 3e-04 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 6e-04 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 7e-04 |
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 100 bits (250), Expect = 3e-23
Identities = 29/88 (32%), Positives = 49/88 (55%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPK 336
Y SPE++ G S DI+ LG++LFEL FST E+ R ++ +R+ P K+P+
Sbjct: 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKFPLLFTQKYPQ 301
Query: 337 EASFCLWLLHPEPSGRPKMGELLQSEFL 364
E +L P P+ RP+ +++++
Sbjct: 302 EHMMVQDMLSPSPTERPEATDIIENAIF 329
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 89.7 bits (223), Expect = 7e-20
Identities = 33/93 (35%), Positives = 51/93 (54%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLK 333
T Y SPE++ G S DI+ LG++LFEL PFST E+ RT++ +R+ PP K
Sbjct: 193 TKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQK 252
Query: 334 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366
+P E +L P P RP+ ++++ +
Sbjct: 253 YPCEYVMVQDMLSPSPMERPEAINIIENAVFED 285
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 76.9 bits (190), Expect = 1e-15
Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLK 333
T Y SPE+++ D+Y LG++L EL T E ++ + LR ++
Sbjct: 184 TLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDI---- 239
Query: 334 FPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAA 377
F K+ + LL +P RP E+L++ + + ER A
Sbjct: 240 FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPEKNERHTA 284
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 6e-14
Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 4/104 (3%)
Query: 277 YASPEELAGAPV-SCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRV--LPPQLLLK 333
Y + E L G + D+Y LG++ FE+ PFSTG E+ + LR PP
Sbjct: 196 YVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDN 255
Query: 334 FPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREA 376
K L+ +P+ RP LL S +L +EA
Sbjct: 256 KMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIKEA 299
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 3e-11
Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 9/95 (9%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK 333
Y +PE L G A+D++ LG+ + E+ C GE LR LPP+
Sbjct: 222 YMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----GWQQLRQGYLPPEFTAG 276
Query: 334 FPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367
E S + +L P+P R LL L +P
Sbjct: 277 LSSELRSVLVMMLEPDPKLRATAEALLALPVLRQP 311
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 63.3 bits (153), Expect = 2e-10
Identities = 92/656 (14%), Positives = 186/656 (28%), Gaps = 203/656 (30%)
Query: 59 DFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSV 118
DFE +H + + D L D FV + DV D PK +
Sbjct: 8 DFETGEH----QYQYKDIL------------SVFEDAFVDNFDCKDV-----QDMPKSIL 46
Query: 119 DVYECLHIF---------RQIVEIVYAAHSQGI---VVHNVRPS-CFVMSSFNHVSFIES 165
E HI ++ + + + + V +R + F+MS +
Sbjct: 47 SKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPI-KTEQRQP 105
Query: 166 ASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225
+ + + + N + + + LQ +LR+ L+L
Sbjct: 106 SMMTRMYIEQRD---RLYN--DNQVFAKYNVSRLQPYLKLRQALLEL------------- 147
Query: 226 MQSSSAYGTHVVLVEGM-------------QEHKILDNR------VNVEQVEEKKQPFPM 266
+ VL++G+ +K+ +N++ + M
Sbjct: 148 --RPAKN----VLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEM 201
Query: 267 KQILL--METNWYASPEELAGAPVSCASDIYRLGVLL----------------------- 301
Q LL ++ NW + + + + S L LL
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA 261
Query: 302 FELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361
F L C + + + R + + L S L H + P + L
Sbjct: 262 FNLSC---------KILLTTRFKQVTDFLSAATTTHIS----LDHHSMTLTPDEVKSLLL 308
Query: 362 EFLNEPRDSMEEREAAIELREQIDEE---------ELLLEFLLLVQQRKQESAKKLQDIV 412
++L+ +L ++ E + + L K + KL I+
Sbjct: 309 KYLDCRPQ---------DLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTII 359
Query: 413 SFICSDIEEVSKQQAILRKKGGLGSFAELA--NDDLSGLNIPS---------------LN 455
S + + A RK F L+ +IP+ +
Sbjct: 360 E---SSLNVLE--PAEYRK-----MFDRLSVFPPS---AHIPTILLSLIWFDVIKSDVMV 406
Query: 456 IIDNDCSATMGSRKRFRPELQLH--HLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNF 513
+++ ++ ++ + + +LE ++ H RS+ + K F
Sbjct: 407 VVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH-------RSIVDHYNIPKTF 459
Query: 514 ------KKLESAYFLTRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINN--LGSK- 564
YF + + H L + + + ++ L K
Sbjct: 460 DSDDLIPPYLDQYFYSH----------IGHH--LKNIEHPERMTLFRMVFLDFRFLEQKI 507
Query: 565 --EGYSEGRRSGWINPFLEGLCKYLSF-SKLRVKADLNQGDLLN-----SSNLVCS 612
+ + +N + L Y + K + +L+ NL+CS
Sbjct: 508 RHDSTAWNASGSILNTLQQ-LKFYKPYICDNDPKYERLVNAILDFLPKIEENLICS 562
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 62.2 bits (150), Expect = 5e-10
Identities = 72/523 (13%), Positives = 152/523 (29%), Gaps = 128/523 (24%)
Query: 62 LRKHSDGVELTHGDHLR-NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRS 117
L K + V+ + LR N L + E P + + + R + D K +
Sbjct: 72 LSKQEEMVQKFVEEVLRINYKFLMSPIKTEQ-RQPSMMTRMYIEQRDRLYNDNQVFAKYN 130
Query: 118 VDVYECLHIFRQIVEIVYAAHSQGIVVHN-------------VRPSCFVMSSFNHVSFIE 164
V + RQ + + ++ +++ + ++
Sbjct: 131 VSRLQPYLKLRQALLEL--RPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLN 188
Query: 165 SASCSDSGSD-SHEEGLNTQNM----ETKDLSSPLPLDMLQRRTRLRR------------ 207
+C+ + + L Q D SS + L + + LRR
Sbjct: 189 LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLL 248
Query: 208 --EDLQ--------------LVTAPTNDLSEASCMQSSSAYGTHVVLVE---GMQEHKIL 248
++Q L+T T + S+A TH+ L + ++
Sbjct: 249 VLLNVQNAKAWNAFNLSCKILLT--TRFKQVTDFL--SAATTTHISLDHHSMTLTPDEVK 304
Query: 249 DNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA--SDIYRLGVLLFELFC 306
+ ++ + Q P E L P + ++ R G+ ++ +
Sbjct: 305 SLLLKY--LDCRPQDLP--------------REVLTTNPRRLSIIAESIRDGLATWDNW- 347
Query: 307 PFSTGEEKTRTM-SSLRHRVLPPQLLLK-------FPK-----EASFC-LWLLHPEPSGR 352
++ T + SSL VL P K FP +W +
Sbjct: 348 KHVNCDKLTTIIESSL--NVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVM 405
Query: 353 PKMGELLQSEFLNEPRDSMEER----EAAIELREQIDEE-EL---LLEFLLLVQQRKQES 404
+ +L + + + E +EL+ +++ E L +++ + + +
Sbjct: 406 VVVNKLHKYSLVE--KQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDD 463
Query: 405 AKKLQD---IVSFI------CSDIEEVSKQQAI----------LRKKGGLGSFAELANDD 445
S I E ++ + + +R + + +
Sbjct: 464 LIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNT 523
Query: 446 LSGLNIPSLNIIDNDC--SATMGSRKRF--RPELQLHHLEECD 484
L L I DND + + F + E L + D
Sbjct: 524 LQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTD 566
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 49.1 bits (116), Expect = 5e-06
Identities = 53/398 (13%), Positives = 121/398 (30%), Gaps = 103/398 (25%)
Query: 362 EFLNEPRDSMEEREAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQDIV----SFICS 417
+ + P+ + + E + + L F L+ ++++ K +++++ F+ S
Sbjct: 37 DVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMS 96
Query: 418 DIEEVSKQQAILRKKGGLGSFAE----LANDD--LSGLNIPSLNIIDNDCSATMGSRKRF 471
I+ +Q +++ + + E L ND+ + N+ R
Sbjct: 97 PIKTEQRQPSMMTRM-----YIEQRDRLYNDNQVFAKYNVS-----------------RL 134
Query: 472 RPELQLH-HLEECDDNLDDNQ-----------KHNLTGNEERSLFKSSRLMK------NF 513
+P L+L L E L + K + + S +K M N
Sbjct: 135 QPYLKLRQALLE----LRPAKNVLIDGVLGSGKTWVALDVCLS-YKVQCKMDFKIFWLNL 189
Query: 514 KKLESAYFL-----TRCRPVKPSGRPLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYS 568
K S + + P+ HS + + ++ + L + Y
Sbjct: 190 KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSS-----NIKLRIHSIQAELRRLLKSKPYE 244
Query: 569 EG-------RRSGWINPFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDG-- 619
+ + N F CK L ++ + D L ++ SL
Sbjct: 245 NCLLVLLNVQNAKAWNAFNLS-CKILLTTRFKQVTD----FLSAATTTHISLDHHSMTLT 299
Query: 620 -----ELFAAAGVNKKIKVFECDA--IINENRDIHYPVVEMASRSKLSSIC-WNSYIKSQ 671
L K +C + E + + + + S + W+++
Sbjct: 300 PDEVKSLLL--------KYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW--KH 349
Query: 672 IASSNFEGVVQVG-QVLHLIYFSALYCIVLNKLLIIFR 708
+ +++ VL + ++ L +F
Sbjct: 350 VNCDKLTTIIESSLNVLEPAEYRKMF-----DRLSVFP 382
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.9 bits (100), Expect = 4e-04
Identities = 48/318 (15%), Positives = 97/318 (30%), Gaps = 85/318 (26%)
Query: 408 LQDIVS-FICSDIEEVSKQQAILRKKGGLGSFAELANDDLSGLNIPSLNIIDNDCSATMG 466
V F C D++++ K IL K+ E+ D + +
Sbjct: 26 EDAFVDNFDCKDVQDMPKS--ILSKE-------EI--DHI--IMSKD------------- 59
Query: 467 SRKRFRPELQLHHLEECDDNLDDNQKHNLTGNEERSLFKSSRLMKNFKKLESAYFLTRCR 526
L L Q+ E F L N+K L S +
Sbjct: 60 ------AVSGTLRLFWT---LLSKQE------EMVQKFVEEVLRINYKFLMSPI---KTE 101
Query: 527 PVKPSGRPLV---RHSQLSSDGRTSKPL-VNERSSINNLGSKEGYSEGRRSGWINPFLEG 582
+PS + + +L +D + V+ L ++ E R + + ++G
Sbjct: 102 QRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKL--RQALLELRPAKNV--LIDG 157
Query: 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSF----------DRDGELFAAAGVNKKIK 632
+ L K A D+ S + C + F + + + K +
Sbjct: 158 V---LGSGK-TWVA----LDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEM--LQKLLY 207
Query: 633 VFECDAIINENRDIHYPVVEMASRSKLSS-ICWNSYIKSQIASSNFEGVVQVGQVLHLIY 691
+ + + + + + +++L + Y + N VQ + +
Sbjct: 208 QIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLN----VQNAKAWN--A 261
Query: 692 FSALYCIVLNKLLIIFRY 709
F+ L C K+L+ R+
Sbjct: 262 FN-LSC----KILLTTRF 274
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 8e-10
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 12/113 (10%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL---P 327
T +Y SPE P + SDI+ LG +L+EL F + +M +L +++
Sbjct: 188 TPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAF-----EAGSMKNLVLKIISGSF 242
Query: 328 PQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIE 379
P + L + + S L P RP + +L+ F+ + + + E
Sbjct: 243 PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKRIEKFLSPQLIAE 295
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 3e-09
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 12/100 (12%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL---P 327
T +Y SPE++ + SDI+ LG LL+EL PF + L ++
Sbjct: 179 TPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF-----TAFSQKELAGKIREGKF 233
Query: 328 PQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNE 366
++ ++ E +L+ + RP + E+L++ + E
Sbjct: 234 RRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 56.5 bits (137), Expect = 9e-09
Identities = 24/110 (21%), Positives = 41/110 (37%), Gaps = 11/110 (10%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL---- 326
T +Y SPE + + SDI+ LG LL+E+ PF + SL ++
Sbjct: 199 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF---YGDKMNLYSLCKKIEQCDY 255
Query: 327 PPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEERE 375
PP + +E ++P+P RP + + +
Sbjct: 256 PPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSLEH 305
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 56.2 bits (135), Expect = 1e-08
Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 12/114 (10%)
Query: 274 TNWYASPEEL--AGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 328
YA E L + A + A + ++LG+ ++ ++C PF + +P
Sbjct: 254 PVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPG 313
Query: 329 QLLLKFPKEAS-------FCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEERE 375
L F L+ + R E +++ + ++ +
Sbjct: 314 TDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEISSSL 367
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 53.1 bits (127), Expect = 2e-07
Identities = 13/111 (11%), Positives = 33/111 (29%), Gaps = 14/111 (12%)
Query: 277 YASPEELAGAP-----VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 328
+ L ++ A D + LG+ ++ ++C P + + R P
Sbjct: 278 TTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKNIP 337
Query: 329 QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIE 379
Q + + L R + +++ + R + +
Sbjct: 338 QPV------RALLEGFLRYPKEDRLLPLQAMETPEYEQLRTELSAALPLYQ 382
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 51.2 bits (123), Expect = 5e-07
Identities = 33/177 (18%), Positives = 61/177 (34%), Gaps = 30/177 (16%)
Query: 277 YASPEELAGAP-----------VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLR 322
Y PE + +S SD++ LG +L+ + PF + +
Sbjct: 175 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL---- 230
Query: 323 HRVLPPQLLLKFPKEAS-----FCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAA 377
H ++ P ++FP L +P R + ELL ++ + +
Sbjct: 231 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQ---- 286
Query: 378 IELREQIDEEELLLEFLLLVQQRK--QESAKKLQDIVSFICSDIEEVSKQQAILRKK 432
+ +E + +L L+ + ++AK L + S S SK R K
Sbjct: 287 -MAKGTTEEMKYVLGQLVGLNSPNSILKAAKTLYEHYSGGESHNSSSSKTFEKKRGK 342
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 51.4 bits (123), Expect = 8e-07
Identities = 19/104 (18%), Positives = 31/104 (29%), Gaps = 16/104 (15%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFEL---FCPFSTGEEKTRTMSSLRHRVLPPQLLLK 333
+ +PE + P A+DIY +G L L G + +L
Sbjct: 243 FQAPEIVRTGPTV-ATDIYTVGRTLAALTLDLPTR-NGR-------YVDGLPEDDPVLKT 293
Query: 334 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAA 377
+ + P+P R E E + + E A
Sbjct: 294 YDSYGRLLRRAIDPDPRQRFTTAE----EMSAQLTGVLREVVAQ 333
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 50.2 bits (120), Expect = 1e-06
Identities = 32/175 (18%), Positives = 57/175 (32%), Gaps = 26/175 (14%)
Query: 277 YASPEELAGAP-----------VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLR 322
Y PE + +S SD++ LG +L+ + PF + +
Sbjct: 222 YMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL---- 277
Query: 323 HRVLPPQLLLKFPKEAS-----FCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAA 377
H ++ P ++FP L +P R + ELL ++ + +
Sbjct: 278 HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQMAKG 337
Query: 378 IELREQIDEEELLLEFLLLVQQRKQESAKKLQDIVSFICSDIEEVSKQQAILRKK 432
+ +L+ L ++AK L + S S SK R K
Sbjct: 338 TTEEMKYVLGQLV---GLNSPNSILKAAKTLYEHYSGGESHNSSSSKTFEKKRGK 389
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 49.5 bits (119), Expect = 2e-06
Identities = 25/126 (19%), Positives = 50/126 (39%), Gaps = 27/126 (21%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGE-----------EKTRTMSSLR 322
Y SPE+ G +DIY +G++L+E+ PF GE + +++
Sbjct: 178 YFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPF-NGETAVSIAIKHIQDSVPNVTTDV 236
Query: 323 HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELRE 382
+ +P L ++ L + + R K + E ++ + E A E
Sbjct: 237 RKDIPQSL-------SNVILRATEKDKANRYKTIQ----EMKDDLSSVLHENRAN-EDVY 284
Query: 383 QIDEEE 388
++D+ +
Sbjct: 285 ELDKMK 290
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 3e-06
Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 23/119 (19%)
Query: 274 TNWYASPEELAGAP-----------VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMS 319
T Y PE + +S SD++ LG +L+ + PF + +
Sbjct: 191 TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKL- 249
Query: 320 SLRHRVLPPQLLLKFPKEAS-----FCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEE 373
H ++ P ++FP L +P R + ELL ++ + +
Sbjct: 250 ---HAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVNQ 305
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 3e-06
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 15/98 (15%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK 333
Y +PE L+ S D++ +G +++ L PF +T + R+ +
Sbjct: 207 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-----ETSCLKETYLRIK--KNEYS 259
Query: 334 FPKEAS-----FCLWLLHPEPSGRPKMGELLQSEFLNE 366
PK + +L +P+ RP + ELL EF
Sbjct: 260 IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 297
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 49.2 bits (117), Expect = 3e-06
Identities = 13/111 (11%), Positives = 34/111 (30%), Gaps = 22/111 (19%)
Query: 274 TNWYASPEELA-----------GAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMS 319
+ + PE A ++ + D + LG++++ ++C P T +
Sbjct: 265 SRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPI-TKDAALGGSE 323
Query: 320 SLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369
+ P+ + L R + +++ + R
Sbjct: 324 WIFRSCKN------IPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRT 368
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 4e-06
Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 15/98 (15%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK 333
Y +PE L+ S D++ +G +++ L PF +T + R+ +
Sbjct: 181 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF-----ETSCLKETYLRIK--KNEYS 233
Query: 334 FPKEAS-----FCLWLLHPEPSGRPKMGELLQSEFLNE 366
PK + +L +P+ RP + ELL EF
Sbjct: 234 IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 271
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 47.7 bits (114), Expect = 6e-06
Identities = 17/100 (17%), Positives = 34/100 (34%), Gaps = 10/100 (10%)
Query: 274 TNWYASPEELAG-APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ 329
+ + + E L +DI+ L + + G++ +R LP
Sbjct: 193 DSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ----WHEIRQGRLPR- 247
Query: 330 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368
+ +E ++HP+P RP L++ L
Sbjct: 248 IPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSAS 287
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 47.2 bits (113), Expect = 1e-05
Identities = 25/99 (25%), Positives = 36/99 (36%), Gaps = 24/99 (24%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGE-----------EKTRTMSSLR 322
Y SPE+ G V SD+Y LG +L+E+ PF TG+ E S+
Sbjct: 185 YLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF-TGDSPVSVAYQHVREDPIPPSARH 243
Query: 323 HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-MGELLQ 360
+ L + L L P R + E+
Sbjct: 244 EGL-SADL-------DAVVLKALAKNPENRYQTAAEMRA 274
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 11/39 (28%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELF---CPFSTGE 312
Y +PE + + + +DIY L +L+E P+ G+
Sbjct: 201 YMAPERFSESHATYRADIYALTCVLYECLTGSPPY-QGD 238
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 23/108 (21%), Positives = 41/108 (37%), Gaps = 15/108 (13%)
Query: 277 YASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK 333
Y SPE + SD++ LG + + L PF T T+ + ++V+ +
Sbjct: 178 YISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF-----DTDTVKNTLNKVV--LADYE 230
Query: 334 FPKEAS-----FCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREA 376
P S LL P+ R + +L F++ + + E
Sbjct: 231 MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSSTKSKDEG 278
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 45.1 bits (107), Expect = 6e-05
Identities = 21/171 (12%), Positives = 56/171 (32%), Gaps = 29/171 (16%)
Query: 274 TNWYASPEELAG---APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVL 326
T + +PE L+ + DI+ G + + + PF ++ + +
Sbjct: 189 TEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLD 248
Query: 327 PPQLLLKFPKEAS-FCLWLLHPEPSGRPKMGELL----------QSEFLNEPRDSMEERE 375
A ++ +P RP +L Q +F + D +E+
Sbjct: 249 CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEKQLQFFQDVSDRIEKES 308
Query: 376 AAIELREQIDE-----------EELLLEFLLLVQQRKQESAKKLQDIVSFI 415
+ +Q++ E + + +++ + ++D++ +
Sbjct: 309 LDGPIVKQLERGGRAVVKMDWRENITVPLQTDLRKFRTYKGGSVRDLLRAM 359
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 9e-05
Identities = 15/91 (16%), Positives = 34/91 (37%), Gaps = 7/91 (7%)
Query: 277 YASPE---ELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
Y +PE + + +D++ LG +L+ + P+ +K +++ L
Sbjct: 209 YRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQ 268
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360
+ ++ +P RP + LL
Sbjct: 269 SPRHSSALWQLLNSMMTVDPHQRPHIPLLLS 299
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 43.2 bits (102), Expect = 2e-04
Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 14/135 (10%)
Query: 277 YASPEELAGAPVSCA-SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 332
Y +PE L G P +++ LGV L+ L PF E T+ + PP
Sbjct: 195 YCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF---CELEETV---EAAIHPPY--- 245
Query: 333 KFPKEASFCL-WLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEEELLL 391
KE + LL P P R + +L+ ++ +P + + + + + L
Sbjct: 246 LVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVNLADYTWEEVFRVNKPESGVLSA 305
Query: 392 EFLLLVQQRKQESAK 406
L + + + A+
Sbjct: 306 ASLEMGNRSLSDVAQ 320
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 43.4 bits (102), Expect = 2e-04
Identities = 30/141 (21%), Positives = 43/141 (30%), Gaps = 49/141 (34%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFE------LFCPFSTGE--------------- 312
T Y S E L G+ + +DI+ + FE LF P S E
Sbjct: 256 TRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELL 315
Query: 313 --------EKTRTMS-------SLRH-RVLPPQLL-------LKFPKE-----ASFCLWL 344
+ L+H L P L ++ +E F L +
Sbjct: 316 GKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPM 375
Query: 345 LHPEPSGRPKMGELLQSEFLN 365
L P R E L+ +LN
Sbjct: 376 LELIPEKRATAAECLRHPWLN 396
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 42.8 bits (101), Expect = 3e-04
Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 10/113 (8%)
Query: 277 YASPE---ELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
Y +PE + P+ DI+ LG +L+ L PF E + + + P
Sbjct: 216 YRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF----EDGAKLRIVNGKYSIPPH 271
Query: 331 LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQ 383
++ S +L P R + E++ ++ + EL EQ
Sbjct: 272 DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARNVNPKSPITELLEQ 324
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 41.5 bits (98), Expect = 6e-04
Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 20/122 (16%)
Query: 277 YASPEELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL------ 326
YA+PE G D++ LGV+L+ L PF + + LR RVL
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF-----DGQNLKELRERVLRGKYRI 233
Query: 327 PPQLLLKFPKEASFCL-WLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQID 385
P + + L L P R + ++++ ++N + E + + D
Sbjct: 234 PFYM----STDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISD 289
Query: 386 EE 387
++
Sbjct: 290 QK 291
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 41.1 bits (97), Expect = 7e-04
Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 22/105 (20%)
Query: 277 YASPEEL-----AGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 328
Y+ PE + P ++ LG+LL+++ C PF +++ L + P
Sbjct: 204 YSPPEWISRHQYHALPA----TVWSLGILLYDMVCGDIPFE-RDQEI-----LEAELHFP 253
Query: 329 QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSME 372
+ + L P+PS RP + E+L ++ P + +
Sbjct: 254 A---HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAEDVP 295
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 720 | |||
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 99.98 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 99.98 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 99.98 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 99.98 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 99.98 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 99.98 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 99.98 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 99.98 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 99.98 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 99.98 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 99.98 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 99.98 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 99.98 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 99.98 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 99.98 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 99.98 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 99.98 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 99.98 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 99.98 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 99.98 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 99.98 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 99.98 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 99.98 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 99.97 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 99.97 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 99.97 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 99.97 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 99.97 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 99.97 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 99.97 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 99.97 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.97 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 99.97 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 99.97 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 99.97 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 99.97 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 99.97 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 99.97 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 99.97 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 99.97 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 99.97 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 99.97 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 99.97 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 99.97 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 99.97 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 99.97 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 99.97 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 99.97 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 99.97 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 99.97 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 99.97 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 99.97 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 99.97 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 99.97 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 99.97 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 99.97 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 99.97 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 99.97 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 99.97 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 99.97 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 99.97 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 99.97 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 99.97 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 99.97 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 99.97 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 99.97 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 99.97 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 99.97 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 99.97 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 99.97 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 99.97 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 99.97 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 99.97 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 99.97 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 99.97 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 99.97 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 99.97 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 99.97 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 99.97 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 99.97 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 99.97 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 99.97 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 99.97 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 99.97 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 99.97 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 99.97 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 99.97 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 99.97 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 99.97 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 99.97 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 99.97 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 99.97 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 99.97 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 99.97 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 99.97 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 99.97 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 99.97 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 99.97 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 99.97 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 99.97 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 99.97 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 99.97 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 99.97 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 99.97 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 99.97 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 99.97 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 99.97 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 99.96 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 99.96 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 99.96 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 99.96 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 99.96 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 99.96 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 99.96 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 99.96 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 99.96 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 99.96 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 99.96 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 99.96 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 99.96 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 99.96 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 99.96 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 99.95 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 99.94 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.92 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.72 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 99.58 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 99.58 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 99.57 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 99.55 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.55 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.54 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 99.53 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 99.53 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 99.53 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 99.52 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.52 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.52 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.51 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 99.51 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 99.51 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 99.5 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 99.49 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.49 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 99.49 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.48 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 99.48 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 99.48 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 99.48 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.48 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 99.48 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.48 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.47 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.46 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 99.45 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.45 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.45 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 99.44 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.44 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.44 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.44 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.44 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.43 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 99.42 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.42 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.41 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.41 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.41 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.4 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 99.4 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.4 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.39 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.39 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.38 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.38 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.37 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.35 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 99.35 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.34 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.34 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.34 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.34 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.32 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.32 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.32 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.31 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.3 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.3 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.3 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.29 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.29 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.28 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.28 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.27 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.27 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.26 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.26 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.25 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.25 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.25 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.24 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.23 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.23 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.23 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.23 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.22 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.22 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.22 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.22 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.22 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.22 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.21 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.21 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.21 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.21 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.21 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.2 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.2 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.19 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.19 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.19 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.18 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.18 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.18 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.17 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.17 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.17 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.17 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.16 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.16 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.15 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.15 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.14 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.13 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.13 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.13 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.12 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.12 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.11 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.1 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.1 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.09 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.08 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.07 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.07 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.06 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.05 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.04 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.02 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 98.99 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 98.95 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 98.94 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 98.94 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 98.94 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 98.91 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 98.91 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 98.86 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 98.72 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 98.54 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 98.49 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 98.41 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 98.39 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 98.37 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 98.34 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 98.34 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 98.33 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.31 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 98.26 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 98.26 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 98.25 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 98.25 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 98.23 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 98.22 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 98.21 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 98.2 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 98.18 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 98.18 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 98.17 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 98.16 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 98.15 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.15 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 98.15 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 98.14 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 98.09 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 98.07 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 98.06 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 98.06 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 98.03 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 98.03 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 97.99 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 97.98 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 97.98 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 97.96 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 97.93 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 97.89 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 97.89 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 97.84 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 97.82 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 97.73 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 97.65 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 97.6 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 97.58 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 97.54 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 97.53 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 97.51 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 97.48 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 97.47 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 97.4 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 97.39 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 97.35 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 97.32 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 97.27 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 97.26 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 97.18 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 97.16 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 97.1 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.06 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 97.04 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 97.02 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 96.92 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 96.92 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 96.86 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 96.76 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 96.67 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 96.65 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 96.59 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 96.41 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 96.31 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 96.27 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 96.23 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 96.21 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 96.03 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 96.01 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 95.96 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 95.91 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 95.85 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 95.8 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 95.68 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 95.65 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 95.52 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 95.48 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 95.46 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 95.46 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 95.35 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 95.24 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 95.13 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 95.13 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 95.07 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 95.02 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 94.89 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 94.5 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 94.47 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 94.41 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 94.25 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 94.2 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 94.18 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 94.1 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 93.96 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 93.79 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 93.51 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 92.88 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 92.78 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 92.76 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 92.58 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 92.53 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 92.45 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 92.26 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 92.14 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 91.84 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 91.79 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 91.67 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 90.79 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 90.77 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 89.41 |
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-46 Score=390.57 Aligned_cols=211 Identities=14% Similarity=0.149 Sum_probs=172.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|+.+|++++|||||++|+++.........+|+|||| .||+|.++|.+.+ .+++.+++.|++||+.||+|||++|
T Consensus 71 ~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~ylH~~~ 149 (290)
T 3fpq_A 71 RFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTRT 149 (290)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999433322333468999999 8999999996543 4999999999999999999999998
Q ss_pred --ceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 --IVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 --IvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
||||||||+||||+ .+|.+||+|||+|+.....
T Consensus 150 ~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~-------------------------------------------- 185 (290)
T 3fpq_A 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-------------------------------------------- 185 (290)
T ss_dssp SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT--------------------------------------------
T ss_pred CCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC--------------------------------------------
Confidence 99999999999998 4789999888887321000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||+.|||||++.+ .|+.++||||||
T Consensus 186 ------------------------------------------------~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlG 216 (290)
T 3fpq_A 186 ------------------------------------------------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFG 216 (290)
T ss_dssp ------------------------------------------------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHH
T ss_pred ------------------------------------------------ccCCcccCccccCHHHcCC-CCCcHHHHHHHH
Confidence 0012579999999999976 499999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+||||+| ||.........+..+..+..|+.+....+ ...+||.+||++||++|||+.|+|+||||++.
T Consensus 217 vilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~~ 289 (290)
T 3fpq_A 217 MCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp HHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred HHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence 99999999 78766666677777777777776665554 45599999999999999999999999999863
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-46 Score=392.49 Aligned_cols=227 Identities=25% Similarity=0.394 Sum_probs=176.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC--------CCCcEEEEEec-CCCCHHHHHhCCCC--CCCHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA--------AIDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIV 131 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~--------~~~~~~lv~E~-~ggsL~~~L~~~~~--~l~~~~~~~i~~QIl 131 (720)
+..+|+.+|++++|||||++|+++...+. ....+|+|||| .|++|.++|..... ..++..++.|+.||+
T Consensus 49 ~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~ 128 (299)
T 4g31_A 49 KVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIA 128 (299)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHH
Confidence 44578999999999999999995443332 12247999999 89999999965432 245677999999999
Q ss_pred HHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccc
Q 004998 132 EIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 132 ~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
.||+|||++|||||||||+||||+.++.+||+|||+|+.......... ..
T Consensus 129 ~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~-----------------------------~~- 178 (299)
T 4g31_A 129 EAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT-----------------------------VL- 178 (299)
T ss_dssp HHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC-------------------------------------------
T ss_pred HHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccc-----------------------------cc-
Confidence 999999999999999999999999999999999998865432211000 00
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcc
Q 004998 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~ 291 (720)
. ........+..+||+.|||||++.+..|+.+
T Consensus 179 -~-----------------------------------------------~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~ 210 (299)
T 4g31_A 179 -T-----------------------------------------------PMPAYARHTGQVGTKLYMSPEQIHGNSYSHK 210 (299)
T ss_dssp -------------------------------------------------------------CCCTTSCHHHHTTCCCCTH
T ss_pred -c-----------------------------------------------ccccccccCCcccCccccCHHHHcCCCCCCH
Confidence 0 0000001123589999999999999999999
Q ss_pred ccchhhhhhhhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 292 SDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 292 sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|||||||+||||++||....+....+..+....+|+.+....|...+||.+||++||.+|||+.|+|+||||++.
T Consensus 211 ~DiwSlGvilyell~Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 211 VDIFSLGLILFELLYPFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286 (299)
T ss_dssp HHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred HHHHHHHHHHHHHccCCCCccHHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence 9999999999999999987766666777777788888777778888899999999999999999999999999876
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-45 Score=390.97 Aligned_cols=240 Identities=16% Similarity=0.262 Sum_probs=184.5
Q ss_pred CcccccccccC-------CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEe
Q 004998 29 SRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIE 101 (720)
Q Consensus 29 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E 101 (720)
.+.+|.|+++. .+.+.++++.+...... ..-+..+|+.+|++++|||||++++ +++++. .+|+|||
T Consensus 79 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~-~~~~~~---~~~ivmE 151 (346)
T 4fih_A 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYN-SYLVGD---ELWVVME 151 (346)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS---SGGGGHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEC
T ss_pred eEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh---HHHHHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEe
Confidence 34466666655 33444555555443322 1223347888999999999999999 565554 6899999
Q ss_pred c-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCccccc
Q 004998 102 W-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGL 180 (720)
Q Consensus 102 ~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~ 180 (720)
| .||+|.+++.+. .+++.+++.|++||+.||+|||++|||||||||+||||+.+|++||+|||+|+......
T Consensus 152 y~~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~----- 224 (346)
T 4fih_A 152 FLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV----- 224 (346)
T ss_dssp CCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-----
T ss_pred CCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC-----
Confidence 9 899999999653 39999999999999999999999999999999999999999999999998874331110
Q ss_pred ccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcc
Q 004998 181 NTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK 260 (720)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~ 260 (720)
+
T Consensus 225 ----------------------------~--------------------------------------------------- 225 (346)
T 4fih_A 225 ----------------------------P--------------------------------------------------- 225 (346)
T ss_dssp ----------------------------C---------------------------------------------------
T ss_pred ----------------------------C---------------------------------------------------
Confidence 0
Q ss_pred cCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCC-cccccc-Cc
Q 004998 261 KQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLK-FP 335 (720)
Q Consensus 261 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~~~-~p 335 (720)
.....+||++|||||++.+..|+.++|||||||+||||++ ||...... ..+..+.....+ ...... .+
T Consensus 226 ------~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~~i~~~~~~~~~~~~~~s~ 298 (346)
T 4fih_A 226 ------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KAMKMIRDNLPPRLKNLHKVSP 298 (346)
T ss_dssp ------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSSCCCCSCGGGSCH
T ss_pred ------cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHcCCCCCCCccccCCH
Confidence 0012589999999999999999999999999999999999 77665544 445555544322 222233 34
Q ss_pred hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 336 ~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
...+||.+||.+||++|||+.|+|+||||++..
T Consensus 299 ~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~ 331 (346)
T 4fih_A 299 SLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 331 (346)
T ss_dssp HHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred HHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCC
Confidence 556999999999999999999999999998763
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-45 Score=395.78 Aligned_cols=245 Identities=17% Similarity=0.208 Sum_probs=183.9
Q ss_pred cCCcccccccccC-------CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEE
Q 004998 27 DSSRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHA 99 (720)
Q Consensus 27 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv 99 (720)
...+.+|.|+++. .+.+.++++.+..... ......+..+|+.+|++++|||||++++ +++++. .+|+|
T Consensus 27 ~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~-~~~~~~---~~yiV 101 (350)
T 4b9d_A 27 VRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANMKHPNIVQYRE-SFEENG---SLYIV 101 (350)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEEEECTTS-CHHHHHHHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEE
T ss_pred EEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC-CHHHHHHHHHHHHHHHHCCCCCCCcEEE-EEEECC---EEEEE
Confidence 3445566666655 3334444444433221 1222234458899999999999999999 555543 68999
Q ss_pred Eec-CCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcc
Q 004998 100 IEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHE 177 (720)
Q Consensus 100 ~E~-~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~ 177 (720)
||| .||+|.++|. +.+..+++.+++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||+++......
T Consensus 102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-- 179 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV-- 179 (350)
T ss_dssp EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH--
T ss_pred EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc--
Confidence 999 8999999994 344558999999999999999999999999999999999999999999999888874321000
Q ss_pred cccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhh
Q 004998 178 EGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQV 257 (720)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~ 257 (720)
+
T Consensus 180 -------------------------------~------------------------------------------------ 180 (350)
T 4b9d_A 180 -------------------------------E------------------------------------------------ 180 (350)
T ss_dssp -------------------------------H------------------------------------------------
T ss_pred -------------------------------c------------------------------------------------
Confidence 0
Q ss_pred hcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC
Q 004998 258 EEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF 334 (720)
Q Consensus 258 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~ 334 (720)
.....+||+.|||||++.+..|+.++|||||||+||||++ ||...... ..+..+..+.+|+......
T Consensus 181 ---------~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-~~~~~i~~~~~~~~~~~~s 250 (350)
T 4b9d_A 181 ---------LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMK-NLVLKIISGSFPPVSLHYS 250 (350)
T ss_dssp ---------HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHTCCCCCCTTSC
T ss_pred ---------cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHcCCCCCCCccCC
Confidence 0012579999999999999999999999999999999999 78766554 4455555555554433334
Q ss_pred chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 335 PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 335 p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+...+||.+||++||++|||+.|+|+||||+..
T Consensus 251 ~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 251 YDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence 455699999999999999999999999999865
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-45 Score=382.24 Aligned_cols=206 Identities=18% Similarity=0.276 Sum_probs=163.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|++++|||||++++ +++++. .+|+||||.+|+|.++|.+.+ .+++.+++.|++||+.||+|||++||
T Consensus 59 ~~~~Ei~il~~l~HpnIv~~~~-~~~~~~---~~~ivmEy~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~~I 133 (275)
T 3hyh_A 59 RIEREISYLRLLRHPHIIKLYD-VIKSKD---EIIMVIEYAGNELFDYIVQRD-KMSEQEARRFFQQIISAVEYCHRHKI 133 (275)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCEEHHHHHHHSC-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHCCCCCCCeEEE-EEEECC---EEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 4558888999999999999999 665554 689999998899999996554 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+|||++.++++||+|||+|+......
T Consensus 134 iHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~----------------------------------------------- 166 (275)
T 3hyh_A 134 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----------------------------------------------- 166 (275)
T ss_dssp CCCCCCTTTEEECTTCCEEECCSSCC------------------------------------------------------
T ss_pred ccccCChHHeEECCCCCEEEeecCCCeecCCCC-----------------------------------------------
Confidence 999999999999999999999888874321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvll 301 (720)
.....+||+.|||||++.+..| ++++|||||||++
T Consensus 167 --------------------------------------------~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvil 202 (275)
T 3hyh_A 167 --------------------------------------------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 202 (275)
T ss_dssp ----------------------------------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHH
T ss_pred --------------------------------------------ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHH
Confidence 0011479999999999998886 6899999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++ ||...... ..+..+....++ ++... +...+||.+||++||++|||++|+|+||||+..
T Consensus 203 y~lltg~~PF~~~~~~-~~~~~i~~~~~~--~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~ 269 (275)
T 3hyh_A 203 YVMLCRRLPFDDESIP-VLFKNISNGVYT--LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD 269 (275)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHTCCC--CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred HHHHHCCCCCCCCCHH-HHHHHHHcCCCC--CCCCCCHHHHHHHHHHccCChhHCcCHHHHHcCcccccC
Confidence 99999 77665443 455555554332 22233 445599999999999999999999999999754
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-45 Score=389.38 Aligned_cols=246 Identities=17% Similarity=0.205 Sum_probs=184.7
Q ss_pred ccCCcccccccccC-------CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEE
Q 004998 26 SDSSRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVH 98 (720)
Q Consensus 26 ~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~l 98 (720)
....+.+|.|+++. .+.+..+.+.+...........-+..+|+.+|++++|||||++++ +++++. .+|+
T Consensus 34 y~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~-~~~~~~---~~yi 109 (311)
T 4aw0_A 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF-TFQDDE---KLYF 109 (311)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEE
T ss_pred cEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEE-EEEeCC---EEEE
Confidence 33445667776665 223333433332211111122234457888999999999999999 666654 6899
Q ss_pred EEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcc
Q 004998 99 AIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHE 177 (720)
Q Consensus 99 v~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~ 177 (720)
|||| .||+|.++|.+.+ .+++.+++.|+.||+.||+|||++|||||||||+||||+.+|++||+|||+|+........
T Consensus 110 vmEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 110 GLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp EECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred EEecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 9999 8999999996544 4999999999999999999999999999999999999999999999999888543211000
Q ss_pred cccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhh
Q 004998 178 EGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQV 257 (720)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~ 257 (720)
T Consensus 189 -------------------------------------------------------------------------------- 188 (311)
T 4aw0_A 189 -------------------------------------------------------------------------------- 188 (311)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccc-c
Q 004998 258 EEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-K 333 (720)
Q Consensus 258 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~ 333 (720)
......+||+.|||||++.+..|+.++|||||||+||||++ ||...+.. ..+..+.+..+. ++. .
T Consensus 189 --------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~~i~~~~~~--~p~~~ 257 (311)
T 4aw0_A 189 --------ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEG-LIFAKIIKLEYD--FPEKF 257 (311)
T ss_dssp --------CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCC--CCTTC
T ss_pred --------ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCCC--CCccc
Confidence 00112589999999999999999999999999999999999 78765544 444455443321 222 3
Q ss_pred CchHHHHHHHcCCCCCCCCCChHH------HHcCcccCCC
Q 004998 334 FPKEASFCLWLLHPEPSGRPKMGE------LLQSEFLNEP 367 (720)
Q Consensus 334 ~p~~~~li~~~L~~dP~~Rpta~e------iL~hp~~~~~ 367 (720)
++...+||.+||.+||++|||++| |++||||+..
T Consensus 258 s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~i 297 (311)
T 4aw0_A 258 FPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 297 (311)
T ss_dssp CHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred CHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCC
Confidence 345569999999999999999988 5899999986
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-44 Score=392.57 Aligned_cols=242 Identities=16% Similarity=0.273 Sum_probs=185.1
Q ss_pred cCCcccccccccC-------CCCCCccccccccccCCCCccceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEE
Q 004998 27 DSSRALNISGVSD-------RNPRLLRGERFGVRGDDSNDFELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHA 99 (720)
Q Consensus 27 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv 99 (720)
...+.+|.|+++. .+.+.++++.+..... ...-+..+|+.+|++++|||||++|+ +++++. .+|||
T Consensus 154 ~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~---~~~~~~~~Ei~il~~l~HpnIV~l~~-~~~~~~---~~~iV 226 (423)
T 4fie_A 154 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ---QRRELLFNEVVIMRDYQHENVVEMYN-SYLVGD---ELWVV 226 (423)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC---SSGGGHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEE
T ss_pred EeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch---hHHHHHHHHHHHHHhCCCCCCCceEE-EEEECC---EEEEE
Confidence 3345566666655 2334455555543322 11223347888999999999999999 565554 68999
Q ss_pred Eec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCccc
Q 004998 100 IEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEE 178 (720)
Q Consensus 100 ~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~ 178 (720)
||| .||+|.+++... .+++.+++.|++||+.||+|||++|||||||||+||||+.+|++||+|||+|+......
T Consensus 227 mEy~~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--- 301 (423)
T 4fie_A 227 MEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--- 301 (423)
T ss_dssp EECCTTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC---
T ss_pred EeCCCCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC---
Confidence 999 899999999643 39999999999999999999999999999999999999999999999998884331110
Q ss_pred ccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhh
Q 004998 179 GLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVE 258 (720)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~ 258 (720)
.
T Consensus 302 ------------------------------~------------------------------------------------- 302 (423)
T 4fie_A 302 ------------------------------P------------------------------------------------- 302 (423)
T ss_dssp ------------------------------C-------------------------------------------------
T ss_pred ------------------------------c-------------------------------------------------
Confidence 0
Q ss_pred cccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCc-cccccC
Q 004998 259 EKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLKF 334 (720)
Q Consensus 259 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~~ 334 (720)
.....+||++|||||++.+..|+.++|||||||++|||++ ||...... ..+..+.....+. .....+
T Consensus 303 --------~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~-~~~~~i~~~~~~~~~~~~~~ 373 (423)
T 4fie_A 303 --------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-KAMKMIRDNLPPRLKNLHKV 373 (423)
T ss_dssp --------CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHSCCCCCSCTTSS
T ss_pred --------cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHcCCCCCCcccccC
Confidence 0012589999999999999999999999999999999999 77665544 4455555443222 222333
Q ss_pred -chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 335 -PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 335 -p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+...+||.+||.+||.+|||+.|+|+||||+...
T Consensus 374 s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~ 408 (423)
T 4fie_A 374 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 408 (423)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCC
Confidence 4556999999999999999999999999998763
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-44 Score=379.42 Aligned_cols=208 Identities=18% Similarity=0.248 Sum_probs=165.1
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+..+|+.+|++++|||||++++ +++++. .+|+|||| .||+|.++|.+.+ .+++.+++.|++||+.||+|||++
T Consensus 71 ~~~~~E~~il~~l~HpnIv~l~~-~~~~~~---~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~ 145 (304)
T 3ubd_A 71 VRTKMERDILVEVNHPFIVKLHY-AFQTEG---KLYLILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLHSL 145 (304)
T ss_dssp C------CCCCCCCCTTEECEEE-EEEETT---EEEEEECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCCCCCeEEE-EEEECC---EEEEEEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 35557888999999999999999 665553 68999999 9999999996544 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|||||||||+|||++.+|++||+|||+|+......
T Consensus 146 ~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--------------------------------------------- 180 (304)
T 3ubd_A 146 GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--------------------------------------------- 180 (304)
T ss_dssp TCCCSSCCGGGEEECTTSCEEEESSEEEEC--------------------------------------------------
T ss_pred CCcCCCCCHHHeEEcCCCCEEecccccceeccCCC---------------------------------------------
Confidence 99999999999999999999999888874321100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......+||+.|||||++.+..|+.++|||||||+
T Consensus 181 ---------------------------------------------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvi 215 (304)
T 3ubd_A 181 ---------------------------------------------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVL 215 (304)
T ss_dssp ---------------------------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccccCcccCCHHHhccCCCCCCCcccchHHH
Confidence 00012579999999999999999999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
||||++ ||...+.. ..+..+.+..++ ++. ..+...+||.+||++||++|||+ +|+++||||+..
T Consensus 216 lyemltG~~PF~~~~~~-~~~~~i~~~~~~--~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i 288 (304)
T 3ubd_A 216 MFEMLTGTLPFQGKDRK-ETMTMILKAKLG--MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI 288 (304)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHHhCCCCCCCcCHH-HHHHHHHcCCCC--CCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence 999999 78766554 444444443322 222 33455699999999999999984 799999999986
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-44 Score=381.01 Aligned_cols=215 Identities=16% Similarity=0.101 Sum_probs=167.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|++++|||||++|+ +++++. .+|+|||| .||+|.++|++.+ .+++.+++.|+.||+.||+|||++|||
T Consensus 98 ~~E~~il~~l~HpnIV~l~~-~~~~~~---~~~ivmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH~~~Ii 172 (336)
T 4g3f_A 98 VEELVACAGLSSPRIVPLYG-AVREGP---WVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHTRRIL 172 (336)
T ss_dssp THHHHTTTTCCCTTBCCEEE-EEEETT---EEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred HHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 36888999999999999999 565553 68999999 8999999996544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCC-ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 144 VHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 144 HrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
||||||+||||+.+| ++||+|||+|+........ +
T Consensus 173 HRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~------------------------------------~-------- 208 (336)
T 4g3f_A 173 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG------------------------------------K-------- 208 (336)
T ss_dssp CSCCCGGGEEECTTSCCEEECCCTTCEEC---------------------------------------------------
T ss_pred ecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc------------------------------------c--------
Confidence 999999999999887 6999999888543221000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
........+||+.|||||++.+..|+.++|||||||+||
T Consensus 209 -----------------------------------------~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvily 247 (336)
T 4g3f_A 209 -----------------------------------------SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMML 247 (336)
T ss_dssp ----------------------------------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHH
T ss_pred -----------------------------------------ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHH
Confidence 000011257999999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCC-ccccccCchH-HHHHHHcCCCCCCCCCChHHH-------------HcCccc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKE-ASFCLWLLHPEPSGRPKMGEL-------------LQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~~~~p~~-~~li~~~L~~dP~~Rpta~ei-------------L~hp~~ 364 (720)
||++ ||...... ..+..+.....+ ..++..++.. .+||.+||++||.+|||+.|+ |+|||+
T Consensus 248 emltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~ 326 (336)
T 4g3f_A 248 HMLNGCHPWTQYFRG-PLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWK 326 (336)
T ss_dssp HHHHSSCSSTTTCCS-CCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSS
T ss_pred HHHHCcCCCCCCCHH-HHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCc
Confidence 9999 77654433 223333333322 2334445544 599999999999999999997 569999
Q ss_pred CCCccc
Q 004998 365 NEPRDS 370 (720)
Q Consensus 365 ~~~~~~ 370 (720)
.+..++
T Consensus 327 ~~~~~P 332 (336)
T 4g3f_A 327 GEYKEP 332 (336)
T ss_dssp SSCCCC
T ss_pred CCCCCC
Confidence 887554
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-43 Score=386.31 Aligned_cols=221 Identities=15% Similarity=0.161 Sum_probs=168.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecC---CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~---~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|+.+|++++|||||++++ ++... .....+|+||||.+|+|.++|.+.+ .+++.+++.|++||+.||.|||+
T Consensus 99 ~~~~Ei~il~~l~HpnIv~l~~-~~~~~~~~~~~~~~~ivmE~~~g~L~~~i~~~~-~l~~~~~~~~~~qil~al~ylH~ 176 (398)
T 4b99_A 99 RTLRELKILKHFKHDNIIAIKD-ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ-PLTLEHVRYFLYQLLRGLKYMHS 176 (398)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-ECCCSSCTTTCCCEEEEEECCSEEHHHHHTSSS-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcceEee-eeecccccccCCEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 4447999999999999999999 44332 2234789999997789999996544 59999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+|||||||||+|||++.+|.+||+|||+++.+......
T Consensus 177 ~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~------------------------------------------ 214 (398)
T 4b99_A 177 AQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE------------------------------------------ 214 (398)
T ss_dssp TTCBCCCCCGGGEEECTTCCEEECCCTTCBCC------------------------------------------------
T ss_pred CcCcCCCcCccccccCCCCCEEEeecceeeecccCccc------------------------------------------
Confidence 99999999999999999999999999988543221000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLG 298 (720)
........+||++|||||++.+.. |+.++||||||
T Consensus 215 --------------------------------------------~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG 250 (398)
T 4b99_A 215 --------------------------------------------HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG 250 (398)
T ss_dssp ---------------------------------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHH
T ss_pred --------------------------------------------cccccccceeChHhcCHHHhcCCCCCCChhheehhH
Confidence 000011258999999999998865 79999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhc-CCCCcc----------------------------ccccCchHHHHHHHcCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQ----------------------------LLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~----------------------------~~~~~p~~~~li~~~L~ 346 (720)
|++|||++ ||.+.+........+.. +.++.. +....+...+||.+||.
T Consensus 251 ~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~ 330 (398)
T 4b99_A 251 CIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLR 330 (398)
T ss_dssp HHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSC
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCc
Confidence 99999999 77766554333222221 111110 01123445599999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccch
Q 004998 347 PEPSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l 371 (720)
+||.+|||+.|+|+||||++..++.
T Consensus 331 ~dP~~R~ta~e~L~Hp~f~~~~~p~ 355 (398)
T 4b99_A 331 FEPSARISAAAALRHPFLAKYHDPD 355 (398)
T ss_dssp SSTTTSCCHHHHTTSGGGTTTCCGG
T ss_pred CChhHCcCHHHHhcCHhhCcCCCCc
Confidence 9999999999999999999875543
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=360.48 Aligned_cols=205 Identities=16% Similarity=0.233 Sum_probs=162.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|+.+|++++|||||++++ ++..+ .+|+|||| .||+|.++|......+++.++..|+.||+.||.|||++|
T Consensus 78 ~f~~E~~il~~l~HpNIV~l~g-~~~~~----~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~ 152 (307)
T 3omv_A 78 AFRNEVAVLRKTRHVNILLFMG-YMTKD----NLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKN 152 (307)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSS----SCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEECC----eEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447889999999999999999 55433 46999999 999999999766667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+||||+.++.+||+|||+|+........
T Consensus 153 IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~-------------------------------------------- 188 (307)
T 3omv_A 153 IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS-------------------------------------------- 188 (307)
T ss_dssp CBCSCCCSSSEEEETTEEEEECCCSSCBC---------------------------------------------------
T ss_pred ccCCccCHHHEEECCCCcEEEeeccCceecccCCcc--------------------------------------------
Confidence 999999999999999999999988887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC---CCCccccchhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~s~~sDIwSLG 298 (720)
......+||+.|||||++.+. +|+.++||||||
T Consensus 189 --------------------------------------------~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~G 224 (307)
T 3omv_A 189 --------------------------------------------QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYG 224 (307)
T ss_dssp -------------------------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHH
T ss_pred --------------------------------------------eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHH
Confidence 000124799999999999643 489999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCcc---ccccCchH-HHHHHHcCCCCCCCCCChHHHHc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---~~~~~p~~-~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+||||+| ||............+..+..+|. ....+|.. .+|+.+||+.||++|||+.||++
T Consensus 225 vvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~ 293 (307)
T 3omv_A 225 IVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILS 293 (307)
T ss_dssp HHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHH
T ss_pred HHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 99999999 88766655555555555544433 33344444 59999999999999999998764
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.1e-41 Score=363.66 Aligned_cols=235 Identities=18% Similarity=0.237 Sum_probs=162.6
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|..+ +|||||++++ ++++.. ++|+|||| .|++|.++++ .+++.+++.|++||+.||+|||++
T Consensus 65 ~~~~E~~~l~~~~~h~nIv~l~~-~~~~~~---~~~lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH~~ 136 (361)
T 4f9c_A 65 RIAAELQCLTVAGGQDNVMGVKY-CFRKND---HVVIAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIHQF 136 (361)
T ss_dssp HHHHHHHHHHHTCSBTTBCCCSE-EEEETT---EEEEEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCCCceEEE-EEEECC---EEEEEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 445788888887 6999999999 665554 68999999 8999999993 399999999999999999999999
Q ss_pred CceeccCCCCcEEEccC-CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~-~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|||||||||+|||++.+ +.+||+|||+|+........ ..+|+........
T Consensus 137 gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~-----------------------------~~~~~~~~~~~~~ 187 (361)
T 4f9c_A 137 GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIE-----------------------------LLKFVQSEAQQER 187 (361)
T ss_dssp TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCG-----------------------------GGGGC--------
T ss_pred CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccc-----------------------------ccccccccccccc
Confidence 99999999999999876 89999999999654332111 1222111110000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLG 298 (720)
.....+. .. ..........+||++|+|||++.+.. |+.++||||+|
T Consensus 188 ~~~~~~~-----------------------~~----------~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG 234 (361)
T 4f9c_A 188 CSQNKCS-----------------------IC----------LSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAG 234 (361)
T ss_dssp ---------------------------------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHH
T ss_pred ccccccc-----------------------cc----------ccccccccccccCccccCHHHHcCCCCCCCccchhhhH
Confidence 0000000 00 00000112368999999999998875 89999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhc---------------------CCCC------------------c--------
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRH---------------------RVLP------------------P-------- 328 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~---------------------~~~p------------------~-------- 328 (720)
|++|||++ ||.+.......+..+.. ...| |
T Consensus 235 ~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~ 314 (361)
T 4f9c_A 235 VIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQG 314 (361)
T ss_dssp HHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC---------------
T ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhcccccccccccccccc
Confidence 99999999 77654433222221110 0000 0
Q ss_pred -----cccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 329 -----QLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 329 -----~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
...... +...|||.+||++||++|||++|+|+||||++.
T Consensus 315 ~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i 359 (361)
T 4f9c_A 315 HATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM 359 (361)
T ss_dssp -------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred ccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 011122 344599999999999999999999999999875
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=381.58 Aligned_cols=203 Identities=18% Similarity=0.190 Sum_probs=162.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+..+++.++|||||++++ ++++.. .+|+|||| .||+|.++|.+.+ .+++..++.|+.||+.||+|||++||||
T Consensus 241 ~~l~ll~~~~HP~IV~l~~-~f~~~~---~lylVmEy~~GGdL~~~l~~~~-~l~E~~a~~y~~qIl~aL~yLH~~gIiH 315 (689)
T 3v5w_A 241 IMLSLVSTGDCPFIVCMSY-AFHTPD---KLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNRFVVY 315 (689)
T ss_dssp HHHHHHSSSCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHhhCCCCCEeEEEE-EEEECC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 4455778899999999999 666654 68999999 9999999996544 4999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+.+|++||+|||+|+.....
T Consensus 316 RDLKPeNILld~~G~vKL~DFGlA~~~~~~-------------------------------------------------- 345 (689)
T 3v5w_A 316 RDLKPANILLDEHGHVRISDLGLACDFSKK-------------------------------------------------- 345 (689)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECSSC--------------------------------------------------
T ss_pred cCCchHHeEEeCCCCEEecccceeeecCCC--------------------------------------------------
Confidence 999999999999999999988887432111
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~e 303 (720)
.....+||+.|||||++.+ ..|+.++|||||||+|||
T Consensus 346 ------------------------------------------~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYE 383 (689)
T 3v5w_A 346 ------------------------------------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK 383 (689)
T ss_dssp ------------------------------------------CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 0011589999999999975 569999999999999999
Q ss_pred ccc---cCCCCc--hHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 304 LFC---PFSTGE--EKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~--~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|++ ||.... ........+.... ..++..+ +...+||.+||++||.+|++ ++||++||||+..
T Consensus 384 mLtG~~PF~~~~~~~~~~i~~~i~~~~--~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~i 456 (689)
T 3v5w_A 384 LLRGHSPFRQHKTKDKHEIDRMTLTMA--VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 456 (689)
T ss_dssp HHHSSCTTCGGGCCCHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTC
T ss_pred HHhCCCCCCCCChHHHHHHHHhhcCCC--CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCC
Confidence 999 665432 2223333333222 1222333 44569999999999999997 7999999999986
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=350.56 Aligned_cols=204 Identities=17% Similarity=0.209 Sum_probs=163.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIF 127 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~i~ 127 (720)
..+|+.+|++++|||||++++ ++.++. .+|+|||| .+|+|.++|... ...+++.+++.|+
T Consensus 76 f~~E~~il~~l~HpNIV~l~g-~~~~~~---~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 151 (308)
T 4gt4_A 76 FRHEAMLRARLQHPNVVCLLG-VVTKDQ---PLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV 151 (308)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCcce-EEEECC---EEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHH
Confidence 347888999999999999999 555443 57999999 999999999432 1358999999999
Q ss_pred HHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccc
Q 004998 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||.|||+++||||||||+||||+.++.+||+|||+++.....
T Consensus 152 ~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~--------------------------------- 198 (308)
T 4gt4_A 152 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAA--------------------------------- 198 (308)
T ss_dssp HHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGG---------------------------------
T ss_pred HHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCC---------------------------------
Confidence 99999999999999999999999999999999999988887432100
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC
Q 004998 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
+. .......+||+.|||||++.+..
T Consensus 199 -~~------------------------------------------------------~~~~~~~~gt~~ymAPE~l~~~~ 223 (308)
T 4gt4_A 199 -DY------------------------------------------------------YKLLGNSLLPIRWMAPEAIMYGK 223 (308)
T ss_dssp -GC------------------------------------------------------BCSSSSSCBCGGGCCHHHHHHCC
T ss_pred -Cc------------------------------------------------------eeEecccccCCcccCHHHHhCCC
Confidence 00 00001147899999999999999
Q ss_pred CCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|+.++|||||||+||||+| ||...... .....+..+..++.. ..+|. ..+|+.+||+.||++|||+.||+++
T Consensus 224 ~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~-~~~~~i~~~~~~~~p-~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 224 FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ-DVVEMIRNRQVLPCP-DDCPAWVYALMIECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH-HHHHHHHTTCCCCCC-TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCccchhhhHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCc-ccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 9999999999999999997 77766544 455556665554443 34444 4599999999999999999999863
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-40 Score=346.73 Aligned_cols=203 Identities=19% Similarity=0.214 Sum_probs=162.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC------------CCCCCHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP------------KRSVDVYECLHIFRQ 129 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~------------~~~l~~~~~~~i~~Q 129 (720)
+..+|+.+|++++|||||++|+ ++.++. .+|+|||| .+|+|.++|.+. ...+++.+++.|+.|
T Consensus 61 ~f~~E~~il~~l~HpnIV~l~g-~~~~~~---~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 136 (299)
T 4asz_A 61 DFHREAELLTNLQHEHIVKFYG-VCVEGD---PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ 136 (299)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSSS---SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCccEEE-EEeeCC---EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHH
Confidence 3447888999999999999999 555543 58999999 999999999543 245999999999999
Q ss_pred HHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccc
Q 004998 130 IVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 209 (720)
Q Consensus 130 Il~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~D 209 (720)
|+.||.|||+++||||||||+||||+.++.+||+|||+++..... +
T Consensus 137 ia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~----------------------------------~ 182 (299)
T 4asz_A 137 IAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYST----------------------------------D 182 (299)
T ss_dssp HHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGG----------------------------------G
T ss_pred HHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCC----------------------------------C
Confidence 999999999999999999999999999999999988887432100 0
Q ss_pred cccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCC
Q 004998 210 LQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVS 289 (720)
Q Consensus 210 fgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s 289 (720)
. . .......||+.|||||++.+..|+
T Consensus 183 ~----------------------------------~--------------------~~~~~~~gt~~ymAPE~~~~~~~~ 208 (299)
T 4asz_A 183 Y----------------------------------Y--------------------RVGGHTMLPIRWMPPESIMYRKFT 208 (299)
T ss_dssp C----------------------------------E--------------------EETTTEEECGGGCCHHHHHHCCCC
T ss_pred c----------------------------------e--------------------eecCceecChhhcCHHHHcCCCCC
Confidence 0 0 000114689999999999999999
Q ss_pred ccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHH
Q 004998 290 CASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL 359 (720)
.++|||||||+||||+| ||...... ..+..+..+..++.. ..+| ...+|+.+||+.||++|||+.||+
T Consensus 209 ~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~-~~~~~i~~~~~~~~p-~~~~~~~~~li~~cl~~dP~~RPs~~~i~ 281 (299)
T 4asz_A 209 TESDVWSLGVVLWEIFTYGKQPWYQLSNN-EVIECITQGRVLQRP-RTCPQEVYELMLGCWQREPHMRKNIKGIH 281 (299)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHHTCCCCCC-TTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred chhhHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCCCCCC-ccchHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 99999999999999997 77765544 455555555444433 3344 445999999999999999999995
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-39 Score=346.88 Aligned_cols=205 Identities=15% Similarity=0.139 Sum_probs=159.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--------------CCCCHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--------------RSVDVYECLHIF 127 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--------------~~l~~~~~~~i~ 127 (720)
+..+|+.+|++++|||||++++ ++.+.. .+|+|||| .+|+|.++|.+.. .++++.+++.|+
T Consensus 89 ~f~~E~~il~~l~HpnIV~l~g-~~~~~~---~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 164 (329)
T 4aoj_A 89 DFQREAELLTMLQHQHIVRFFG-VCTEGR---PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA 164 (329)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSSS---SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHH
Confidence 3447888999999999999999 555443 58999999 9999999995432 358999999999
Q ss_pred HHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccc
Q 004998 128 RQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRR 207 (720)
Q Consensus 128 ~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l 207 (720)
.||+.||.|||+++||||||||+||||+.++.+||+|||+++......
T Consensus 165 ~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~-------------------------------- 212 (329)
T 4aoj_A 165 SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD-------------------------------- 212 (329)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-----------------------------------------
T ss_pred HHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCCC--------------------------------
Confidence 999999999999999999999999999999999999888875321110
Q ss_pred cccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC
Q 004998 208 EDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP 287 (720)
Q Consensus 208 ~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 287 (720)
. .......+||+.|||||++.+..
T Consensus 213 --~------------------------------------------------------~~~~~~~~gt~~ymAPE~~~~~~ 236 (329)
T 4aoj_A 213 --Y------------------------------------------------------YRVGGRTMLPIRWMPPESILYRK 236 (329)
T ss_dssp ---------------------------------------------------------------CCCCGGGCCHHHHTTCC
T ss_pred --c------------------------------------------------------ceecCcccccccccChhhhcCCC
Confidence 0 00001147899999999999999
Q ss_pred CCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 288 VSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+.++|||||||+||||+| ||...... ..+..+..+..++......+...+|+.+||+.||++|||+.||++
T Consensus 237 ~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~-~~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~ 312 (329)
T 4aoj_A 237 FTTESDVWSFGVVLWEIFTYGKQPWYQLSNT-EAIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHA 312 (329)
T ss_dssp CCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHH
T ss_pred CCccccccchHHHHHHHHcCCCCCCCCCCHH-HHHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 9999999999999999997 77665544 444555554433332233344559999999999999999999986
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-39 Score=369.99 Aligned_cols=208 Identities=17% Similarity=0.264 Sum_probs=170.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|+.+|+.++|||||++++ ++++.. .+|+|||| .||+|.++|......+++.+++.|++||+.||.|||++||+|
T Consensus 203 ~Ei~il~~l~hpnIv~l~~-~~~~~~---~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiH 278 (573)
T 3uto_A 203 KEIQTMSVLRHPTLVNLHD-AFEDDN---EMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVH 278 (573)
T ss_dssp HHHHHHHHTCCTTBCCEEE-EEECSS---EEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEECC---EEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 6888999999999999999 665554 68999999 899999999655556999999999999999999999999999
Q ss_pred ccCCCCcEEEccC--CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 145 HNVRPSCFVMSSF--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 145 rDLKP~NILl~~~--~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||+|||++.+ +.+||+|||+++......
T Consensus 279 RDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~----------------------------------------------- 311 (573)
T 3uto_A 279 LDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----------------------------------------------- 311 (573)
T ss_dssp CCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-----------------------------------------------
T ss_pred ccCChhhccccCCCCCCEEEeeccceeEccCCC-----------------------------------------------
Confidence 9999999999854 899999888874321110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+||++|||||++.+..|+.++|||||||+||
T Consensus 312 --------------------------------------------~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvily 347 (573)
T 3uto_A 312 --------------------------------------------SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSY 347 (573)
T ss_dssp --------------------------------------------EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHH
T ss_pred --------------------------------------------ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHH
Confidence 001247999999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC--CCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~--~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||++ ||...... ..+..+... .+++.....++ ...+||.+||++||.+|||+.|+|+||||+....
T Consensus 348 eml~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~ 419 (573)
T 3uto_A 348 ILLSGLSPFGGENDD-ETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA 419 (573)
T ss_dssp HHHHSCCSSCCSSHH-HHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred HHHHCCCCCCCcCHH-HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence 9999 77766554 444444443 23344444444 4459999999999999999999999999997644
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-39 Score=343.05 Aligned_cols=212 Identities=12% Similarity=0.105 Sum_probs=155.8
Q ss_pred ceeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 61 ELRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 61 ~~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+..++|...+.+++|||||++++++..+......+|+|||| .||+|.++|++. ++++..+..|+.||+.||.|||+
T Consensus 41 ~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~ 118 (303)
T 3hmm_A 41 SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHM 118 (303)
T ss_dssp HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence 344567888888999999999999554444444468999999 899999999654 38999999999999999999998
Q ss_pred c--------CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccc
Q 004998 140 Q--------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 140 ~--------gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
+ |||||||||+||||+.++++||+|||+++...... +.
T Consensus 119 ~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~---------------------------------~~- 164 (303)
T 3hmm_A 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT---------------------------------DT- 164 (303)
T ss_dssp CBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTT---------------------------------TE-
T ss_pred hhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCC---------------------------------Cc-
Confidence 7 99999999999999999999999888874321110 00
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-----
Q 004998 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA----- 286 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----- 286 (720)
........+||++|||||++.+.
T Consensus 165 ----------------------------------------------------~~~~~~~~~GT~~ymAPE~l~~~~~~~~ 192 (303)
T 3hmm_A 165 ----------------------------------------------------IDIAPNHRVGTKRYMAPEVLDDSINMKH 192 (303)
T ss_dssp ----------------------------------------------------ESCC-----CCGGGCCHHHHTTCSCTTC
T ss_pred ----------------------------------------------------eeeecccccccccccCHHHhcccccccC
Confidence 00001125799999999999765
Q ss_pred -CCCccccchhhhhhhhhccc---cCC----------CC----chHHHHHHHhhcCCCCccccccC------chHHHHHH
Q 004998 287 -PVSCASDIYRLGVLLFELFC---PFS----------TG----EEKTRTMSSLRHRVLPPQLLLKF------PKEASFCL 342 (720)
Q Consensus 287 -~~s~~sDIwSLGvll~eLlt---pf~----------~~----~~~~~~~~~l~~~~~p~~~~~~~------p~~~~li~ 342 (720)
.|+.++|||||||+||||+| ||. .. .........+....+.|.++..+ ....+|+.
T Consensus 193 ~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~ 272 (303)
T 3hmm_A 193 FESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMR 272 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHH
T ss_pred CccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHH
Confidence 36789999999999999998 221 10 11223333343444434333222 12358999
Q ss_pred HcCCCCCCCCCChHHHHc
Q 004998 343 WLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~ 360 (720)
+||+.||++|||+.||++
T Consensus 273 ~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 273 ECWYANGAARLTALRIKK 290 (303)
T ss_dssp TTCCSSGGGSCCHHHHHH
T ss_pred HHcccCHhHCcCHHHHHH
Confidence 999999999999999985
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-39 Score=346.34 Aligned_cols=207 Identities=20% Similarity=0.206 Sum_probs=164.5
Q ss_pred eeehhhhcccCCC-CCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHHH
Q 004998 64 KHSDGVELTHGDH-LRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHI 126 (720)
Q Consensus 64 ~~~e~~~Ls~l~H-pnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~i 126 (720)
..+|..+|.+++| ||||++++++.+++. .+|+|||| .+|+|.++|++. ...+++.+++.|
T Consensus 114 ~~~E~~il~~l~hhpnIV~l~g~~~~~~~---~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 190 (353)
T 4ase_A 114 LMSELKILIHIGHHLNVVNLLGACTKPGG---PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 190 (353)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEECCTTS---CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHH
T ss_pred HHHHHHHHHHcCCCCcEEEEEEEEEecCC---EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHH
Confidence 3478889999876 899999994334332 47999999 999999999532 234899999999
Q ss_pred HHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004998 127 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 127 ~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
+.||+.||.|||+++||||||||+|||++.++.+||+|||+++......
T Consensus 191 ~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~------------------------------- 239 (353)
T 4ase_A 191 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP------------------------------- 239 (353)
T ss_dssp HHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT-------------------------------
T ss_pred HHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCC-------------------------------
Confidence 9999999999999999999999999999999999998888885432110
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004998 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
+. .......||+.|||||++.+.
T Consensus 240 --~~-------------------------------------------------------~~~~~~~gt~~ymAPE~l~~~ 262 (353)
T 4ase_A 240 --DY-------------------------------------------------------VRKGDARLPLKWMAPETIFDR 262 (353)
T ss_dssp --TS-------------------------------------------------------EEETTEEECGGGCCHHHHHHC
T ss_pred --Cc-------------------------------------------------------eeeccccccccccCHHHHhcC
Confidence 00 001124789999999999999
Q ss_pred CCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
.|+.++|||||||+||||+| ||............+..+..++......+...+||.+||+.||++|||+.||++|
T Consensus 263 ~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~ 341 (353)
T 4ase_A 263 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341 (353)
T ss_dssp CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 99999999999999999997 7876654445556666555444333344555699999999999999999999975
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-37 Score=325.62 Aligned_cols=226 Identities=24% Similarity=0.381 Sum_probs=177.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC---------------------------------------------------
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA--------------------------------------------------- 91 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~--------------------------------------------------- 91 (720)
+..+|..+|++++|||||++++.+.+...
T Consensus 50 ~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (332)
T 3qd2_B 50 KVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQP 129 (332)
T ss_dssp HHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC------------------------------------------
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccC
Confidence 34478889999999999999995443321
Q ss_pred --CCCcEEEEEec-CCCCHHHHHhCCCC--CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccC
Q 004998 92 --AIDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESA 166 (720)
Q Consensus 92 --~~~~~~lv~E~-~ggsL~~~L~~~~~--~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg 166 (720)
....++++||| .|++|.+++..... ..++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||
T Consensus 130 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG 209 (332)
T 3qd2_B 130 SSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFG 209 (332)
T ss_dssp --CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecC
Confidence 11247999999 89999999955332 35667799999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccc
Q 004998 167 SCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHK 246 (720)
Q Consensus 167 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~ 246 (720)
++...+....... .+.
T Consensus 210 ~a~~~~~~~~~~~-----------------------------~~~----------------------------------- 225 (332)
T 3qd2_B 210 LVTAMDQDEEEQT-----------------------------VLT----------------------------------- 225 (332)
T ss_dssp TCEECSCC------------------------------------------------------------------------
T ss_pred cccccccchhhcc-----------------------------ccc-----------------------------------
Confidence 8855432210000 000
Q ss_pred ccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccccCCCCchHHHHHHHhhcCCC
Q 004998 247 ILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVL 326 (720)
Q Consensus 247 ~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~ 326 (720)
............||+.|+|||++.+..++.++|||||||++|||++|+.+..........+....+
T Consensus 226 --------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~~~~~ 291 (332)
T 3qd2_B 226 --------------PMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVRNLKF 291 (332)
T ss_dssp --------------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHTTCC
T ss_pred --------------cccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhhccCC
Confidence 000000011257899999999999999999999999999999999999887776677777777777
Q ss_pred CccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 327 PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 327 p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|.......+...+||.+||++||.+|||+.|+|+||||++
T Consensus 292 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 292 PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN 331 (332)
T ss_dssp CHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred CcccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence 7777777788889999999999999999999999999986
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-36 Score=317.15 Aligned_cols=209 Identities=15% Similarity=0.190 Sum_probs=168.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ ++..+. .+|+|||| .|++|.+++... .+++.+++.++.||+.||.|||++||+
T Consensus 65 ~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~ 138 (297)
T 3fxz_A 65 INEILVMRENKNPNIVNYLD-SYLVGD---ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVI 138 (297)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHhcCCCCCCCeEeE-EEEECC---EEEEEEECCCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCce
Confidence 46778999999999999999 554443 57999999 899999999654 389999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++........
T Consensus 139 H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 171 (297)
T 3fxz_A 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS----------------------------------------------- 171 (297)
T ss_dssp CCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-----------------------------------------------
T ss_pred eCCCCHHHEEECCCCCEEEeeCCCceecCCccc-----------------------------------------------
Confidence 999999999999999999999988743211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 172 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 208 (297)
T 3fxz_A 172 -------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 208 (297)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHH
Confidence 0011478999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|++ ||..........................+. ..+|+.+||++||.+|||+.|+|+||||+....
T Consensus 209 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~ 278 (297)
T 3fxz_A 209 MIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP 278 (297)
T ss_dssp HHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhcccCc
Confidence 999 776665554444433333333333334444 459999999999999999999999999997643
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-36 Score=324.63 Aligned_cols=208 Identities=17% Similarity=0.215 Sum_probs=166.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++|
T Consensus 60 ~~~~E~~~l~~l~hpnIv~l~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH~~~ 134 (328)
T 3fe3_A 60 KLFREVRIMKILNHPNIVKLFE-VIETEK---TLYLIMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCHQKR 134 (328)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEEECC---EEEEEEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4447888999999999999999 555543 57999999 7999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.......
T Consensus 135 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~---------------------------------------------- 168 (328)
T 3fe3_A 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG---------------------------------------------- 168 (328)
T ss_dssp CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC----------------------------------------------
T ss_pred EeccCCCHHHEEEcCCCCEEEeeccCceecCCCC----------------------------------------------
Confidence 9999999999999999999999998873221000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvl 300 (720)
.....+||++|+|||++.+..+ ++++|||||||+
T Consensus 169 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i 203 (328)
T 3fe3_A 169 ---------------------------------------------KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVI 203 (328)
T ss_dssp ---------------------------------------------GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCcceeCcccccCCCcCCchhhhhhhHHH
Confidence 0011478999999999998886 489999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
+|||++ ||...... .....+..+..+.. ....+...+|+.+||.+||.+|||+.|+|+||||+...
T Consensus 204 l~ell~g~~pf~~~~~~-~~~~~i~~~~~~~p-~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~ 272 (328)
T 3fe3_A 204 LYTLVSGSLPFDGQNLK-ELRERVLRGKYRIP-FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGH 272 (328)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCC-TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTC
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCC-CCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCC
Confidence 999999 77765544 33333333322211 12334556999999999999999999999999998753
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-36 Score=325.01 Aligned_cols=207 Identities=18% Similarity=0.262 Sum_probs=167.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ ++++.. .+|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++||
T Consensus 62 ~~~E~~il~~l~hpnIv~l~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~gi 136 (361)
T 2yab_A 62 IEREVSILRQVLHPNIITLHD-VYENRT---DVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKKI 136 (361)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCcCCCcEEE-EEEeCC---EEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 347888999999999999999 665543 68999999 799999999554 459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCC----ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 143 VVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 143 vHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||||||+|||++.++ .+||+|||++.......
T Consensus 137 vHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~------------------------------------------- 173 (361)
T 2yab_A 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV------------------------------------------- 173 (361)
T ss_dssp ECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC-------------------------------------------
T ss_pred ccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC-------------------------------------------
Confidence 9999999999998776 79998888874321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||+.|+|||++.+..++.++||||||
T Consensus 174 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 205 (361)
T 2yab_A 174 ------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 205 (361)
T ss_dssp ------------------------------------------------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred ------------------------------------------------ccccCCCCccEECchHHcCCCCCccccHHHHH
Confidence 00114689999999999998899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... ..+..+.... +++......+. ..+||.+||.+||.+|||+.|+|+||||+..
T Consensus 206 vil~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 279 (361)
T 2yab_A 206 VITYILLSGASPFLGDTKQ-ETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPV 279 (361)
T ss_dssp HHHHHHHHSCCSSCCSSHH-HHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence 99999999 67665443 3444444332 34444444444 4599999999999999999999999999875
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-36 Score=320.70 Aligned_cols=206 Identities=21% Similarity=0.277 Sum_probs=163.5
Q ss_pred eehhhhccc-CCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..|...+.+ .+||||+++++ ++.++. .+|+||||.+++|.+++...+..+++..++.|+.||+.||.|||++||+
T Consensus 104 ~~e~~~~~~~~~h~~iv~l~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv 179 (311)
T 3p1a_A 104 LAEVGSHEKVGQHPCCVRLEQ-AWEEGG---ILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLV 179 (311)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHhcCCCcEEEEEE-EEEeCC---EEEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 344444444 48999999999 555443 6899999988899999966566699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++...+...
T Consensus 180 H~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~------------------------------------------------ 211 (311)
T 3p1a_A 180 HLDVKPANIFLGPRGRCKLGDFGLLVELGTAG------------------------------------------------ 211 (311)
T ss_dssp CCCCSGGGEEECGGGCEEECCCTTCEECC---------------------------------------------------
T ss_pred cCCCCHHHEEECCCCCEEEccceeeeecccCC------------------------------------------------
Confidence 99999999999999999999998874321110
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+ .++.++|||||||++||
T Consensus 212 -------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~e 247 (311)
T 3p1a_A 212 -------------------------------------------AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILE 247 (311)
T ss_dssp ----------------------------------------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHH
T ss_pred -------------------------------------------CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHH
Confidence 0011368999999999987 58999999999999999
Q ss_pred ccccCCCCchHHHHHHHhhcCCCCccccccCchHH-HHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 304 LFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Lltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~-~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+++....... .....+.....++.+...++... +||.+||++||.+|||+.|+|+||||+++
T Consensus 248 l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~~p 311 (311)
T 3p1a_A 248 VACNMELPHGG-EGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQP 311 (311)
T ss_dssp HHHTCCCCSSH-HHHHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGSCC
T ss_pred HHhCCCCCCCc-cHHHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCccccCC
Confidence 99943222221 23445566666766666665554 99999999999999999999999999874
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-35 Score=312.49 Aligned_cols=211 Identities=16% Similarity=0.211 Sum_probs=163.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..++.+++||||+++++ ++.++. .+|+||||.+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 47 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i 122 (292)
T 3o0g_A 47 SALREICLLKELKHKNIVRLHD-VLHSDK---KLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122 (292)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCCEeeEEe-EEEeCC---EEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3447888999999999999999 555443 689999997778888886655669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.+...+.+..
T Consensus 123 vH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------- 156 (292)
T 3o0g_A 123 LHRDLKPQNLLINRNGELKLANFGLARAFGIPVR---------------------------------------------- 156 (292)
T ss_dssp ECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS----------------------------------------------
T ss_pred ecCCCCHHHEEEcCCCCEEEeecccceecCCccc----------------------------------------------
Confidence 9999999999999999999999998744321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+.. ++.++|||||||++
T Consensus 157 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 192 (292)
T 3o0g_A 157 --------------------------------------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIF 192 (292)
T ss_dssp --------------------------------------------CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHH
T ss_pred --------------------------------------------cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHH
Confidence 001146899999999998876 89999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc--CCCCcc-------------------------cc-ccCchHHHHHHHcCCCCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRH--RVLPPQ-------------------------LL-LKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~-------------------------~~-~~~p~~~~li~~~L~~dP~ 350 (720)
|||++ ||............+.. +..++. .. ...+...+|+.+||++||+
T Consensus 193 ~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 272 (292)
T 3o0g_A 193 AELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPV 272 (292)
T ss_dssp HHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGG
T ss_pred HHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChh
Confidence 99997 54443333333333221 000000 01 1223445999999999999
Q ss_pred CCCChHHHHcCcccCCC
Q 004998 351 GRPKMGELLQSEFLNEP 367 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~ 367 (720)
+|||++|+|+||||+..
T Consensus 273 ~R~t~~e~l~hp~f~~~ 289 (292)
T 3o0g_A 273 QRISAEEALQHPYFSDF 289 (292)
T ss_dssp GSCCHHHHHTSGGGTTC
T ss_pred hCCCHHHHhcCcccccC
Confidence 99999999999999875
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-36 Score=335.27 Aligned_cols=213 Identities=18% Similarity=0.208 Sum_probs=161.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|..++|||||++++ ++.... ....+|+||||.+++|.+.+.. .+++.+++.+++||+.||+|||+
T Consensus 107 ~~~~E~~~l~~l~hpnIv~l~~-~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH~ 182 (464)
T 3ttj_A 107 RAYRELVLMKCVNHKNIISLLN-VFTPQKTLEEFQDVYLVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS 182 (464)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSE-EECSCCSTTTCCEEEEEEECCSEEHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEccCCccccCCeEEEEEeCCCCCHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHH
Confidence 4458888999999999999999 554332 2346899999977788888843 38999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||+++..+...
T Consensus 183 ~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-------------------------------------------- 218 (464)
T 3ttj_A 183 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-------------------------------------------- 218 (464)
T ss_dssp TTCCCCCCCGGGEEECTTSCEEECCCCCC-----CC--------------------------------------------
T ss_pred CCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCc--------------------------------------------
Confidence 999999999999999999999999998874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||++|+|||++.+..|+.++|||||||
T Consensus 219 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~ 251 (464)
T 3ttj_A 219 -----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 251 (464)
T ss_dssp -----------------------------------------------CC----CCCTTCCHHHHTTCCCCTTHHHHHHHH
T ss_pred -----------------------------------------------ccCCCcccccccCHHHHcCCCCCHHHHHHHHHH
Confidence 001257899999999999999999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc-CCCCccc-----------------------ccc----------------Cch
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQL-----------------------LLK----------------FPK 336 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~~-----------------------~~~----------------~p~ 336 (720)
++|||++ ||.+..........+.. +..++.+ ... .+.
T Consensus 252 il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 331 (464)
T 3ttj_A 252 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 331 (464)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHH
Confidence 9999999 77665543322222211 1010000 000 123
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 337 ~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
..+||.+||++||.+|||++|+|+||||+...++
T Consensus 332 ~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~~~~ 365 (464)
T 3ttj_A 332 ARDLLSKMLVIDPAKRISVDDALQHPYINVWYDP 365 (464)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCCH
T ss_pred HHHHHHHHcCCChhhCCCHHHHhcChhhhhccCc
Confidence 4599999999999999999999999999976543
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-36 Score=317.14 Aligned_cols=211 Identities=16% Similarity=0.211 Sum_probs=163.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..+|.+++||||+++++ ++.++. .+++||||.+++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 66 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~iv 141 (311)
T 3niz_A 66 AIREISLLKELHHPNIVSLID-VIHSER---CLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRIL 141 (311)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECCSS---CEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHcCCCCEeeeee-EEccCC---EEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 347888999999999999999 555443 6799999976799999977666799999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++...+....
T Consensus 142 H~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~----------------------------------------------- 174 (311)
T 3niz_A 142 HRDLKPQNLLINSDGALKLADFGLARAFGIPVR----------------------------------------------- 174 (311)
T ss_dssp CCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-----------------------------------------------
T ss_pred cCCCchHhEEECCCCCEEEccCcCceecCCCcc-----------------------------------------------
Confidence 999999999999999999999998844321100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+. .++.++|||||||++|
T Consensus 175 -------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ 211 (311)
T 3niz_A 175 -------------------------------------------SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFA 211 (311)
T ss_dssp ----------------------------------------------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHH
Confidence 00113679999999999874 4899999999999999
Q ss_pred hccc---cCCCCchHHHH--HHHhhcCCCCcc-------------------------c-cccCchHHHHHHHcCCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRT--MSSLRHRVLPPQ-------------------------L-LLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~--~~~l~~~~~p~~-------------------------~-~~~~p~~~~li~~~L~~dP~~ 351 (720)
+|++ ||......... +..+.....+.. . ....+...+||.+||++||.+
T Consensus 212 ~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 291 (311)
T 3niz_A 212 EMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNK 291 (311)
T ss_dssp HHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTT
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhH
Confidence 9999 67654332221 111111111111 0 112234459999999999999
Q ss_pred CCChHHHHcCcccCCCc
Q 004998 352 RPKMGELLQSEFLNEPR 368 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~~ 368 (720)
|||+.|+|+||||+...
T Consensus 292 Rpt~~ell~hp~f~~~~ 308 (311)
T 3niz_A 292 RISARDAMNHPYFKDLD 308 (311)
T ss_dssp SCCHHHHHTSGGGTTSC
T ss_pred CCCHHHHhcCcccccCC
Confidence 99999999999999863
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-35 Score=311.47 Aligned_cols=210 Identities=19% Similarity=0.248 Sum_probs=157.5
Q ss_pred ehhhhccc---CCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTH---GDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 66 ~e~~~Ls~---l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+|..++.+ ++||||+++++ ++.... ....++++|||.+++|.+++.... ..+++.+++.++.||+.||.|||+
T Consensus 60 ~e~~~l~~l~~~~h~niv~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~ 138 (308)
T 3g33_A 60 REVALLRRLEAFEHPNVVRLMD-VCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHA 138 (308)
T ss_dssp HHHHHHHHHHHHCCTTBCCEEE-EEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCeEEeee-eeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45555555 45999999999 444332 223579999997789999995543 349999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||.+...+...
T Consensus 139 ~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~-------------------------------------------- 174 (308)
T 3g33_A 139 NCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM-------------------------------------------- 174 (308)
T ss_dssp TTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCC--------------------------------------------
T ss_pred CCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCc--------------------------------------------
Confidence 999999999999999999999999998874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 175 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 207 (308)
T 3g33_A 175 -----------------------------------------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGC 207 (308)
T ss_dssp -----------------------------------------------CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHH
T ss_pred -----------------------------------------------ccCCccccccccCchHHcCCCCCchHHHHHHHH
Confidence 001146899999999999999999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc-CCCCcc-----------------------ccccC-chHHHHHHHcCCCCCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQ-----------------------LLLKF-PKEASFCLWLLHPEPSG 351 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~-----------------------~~~~~-p~~~~li~~~L~~dP~~ 351 (720)
++|||++ ||............+.. +..++. ..... +...+||.+||++||.+
T Consensus 208 il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 287 (308)
T 3g33_A 208 IFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHK 287 (308)
T ss_dssp HHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTT
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCcc
Confidence 9999999 67665544333222221 111100 11122 33459999999999999
Q ss_pred CCChHHHHcCcccCCC
Q 004998 352 RPKMGELLQSEFLNEP 367 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~ 367 (720)
|||+.|+|+||||+..
T Consensus 288 R~t~~e~l~h~~~~~~ 303 (308)
T 3g33_A 288 RISAFRALQHSYLHKD 303 (308)
T ss_dssp SCCHHHHHTSTTC---
T ss_pred CCCHHHHhcCccccCC
Confidence 9999999999999975
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=322.69 Aligned_cols=213 Identities=16% Similarity=0.251 Sum_probs=164.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCC---CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~---~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|.+++||||+++++ ++..... ...+|+||||.|++|.+++... .+++..++.++.||+.||.|||+
T Consensus 70 ~~~~E~~~l~~l~hpnIv~l~~-~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH~ 146 (367)
T 1cm8_A 70 RAYRELRLLKHMRHENVIGLLD-VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHA 146 (367)
T ss_dssp HHHHHHHHHHHCCBTTBCCCSE-EECSCSSTTTCCCCEEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcCCCCcee-eEecCCccccCceEEEEEecCCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence 4458888999999999999999 5544322 2457999999999999999653 49999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||+++..+..
T Consensus 147 ~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~--------------------------------------------- 181 (367)
T 1cm8_A 147 AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE--------------------------------------------- 181 (367)
T ss_dssp TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS---------------------------------------------
T ss_pred CCccccCcCHHHEEEcCCCCEEEEeeecccccccc---------------------------------------------
Confidence 99999999999999999999999988887432110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
....+||++|+|||++.+ ..++.++||||||
T Consensus 182 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 213 (367)
T 1cm8_A 182 ------------------------------------------------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVG 213 (367)
T ss_dssp ------------------------------------------------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHH
T ss_pred ------------------------------------------------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHH
Confidence 011468999999999987 5699999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhc-CCCCc----------------------------cccccCchHHHHHHHcCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RVLPP----------------------------QLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~----------------------------~~~~~~p~~~~li~~~L~ 346 (720)
|++|||++ ||.+..........+.. +..+. .+....+...+|+.+||+
T Consensus 214 ~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~ 293 (367)
T 1cm8_A 214 CIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLV 293 (367)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHcc
Confidence 99999999 67665443322222111 11111 111223455699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccch
Q 004998 347 PEPSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l 371 (720)
.||.+|||+.|+|+||||+...+..
T Consensus 294 ~dP~~R~t~~e~l~hp~f~~~~~~~ 318 (367)
T 1cm8_A 294 LDAEQRVTAGEALAHPYFESLHDTE 318 (367)
T ss_dssp SSTTTSCCHHHHHHSGGGTTTC---
T ss_pred CChhHCCCHHHHhcChHHHhhcCCc
Confidence 9999999999999999999875543
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-35 Score=311.40 Aligned_cols=209 Identities=17% Similarity=0.245 Sum_probs=160.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..++.+++||||+++++ ++.... .+|+||||.+++|.+++......+++..++.++.||+.||.|||++||+|
T Consensus 48 ~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H 123 (288)
T 1ob3_A 48 IREISILKELKHSNIVKLYD-VIHTKK---RLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123 (288)
T ss_dssp HHHHHGGGGCCCTTBCCEEE-EEECSS---CEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHhcCCCCEeeeee-EEccCC---eEEEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 37888999999999999999 555443 68999999667999999766566999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||.+...+....
T Consensus 124 ~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------------ 155 (288)
T 1ob3_A 124 RDLKPQNLLINREGELKIADFGLARAFGIPVR------------------------------------------------ 155 (288)
T ss_dssp SCCCGGGEEECTTSCEEECCTTHHHHHCC---------------------------------------------------
T ss_pred CCCCHHHEEEcCCCCEEEeECccccccCcccc------------------------------------------------
Confidence 99999999999999999999988743211100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+.. ++.++|||||||++||
T Consensus 156 ------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ 193 (288)
T 1ob3_A 156 ------------------------------------------KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAE 193 (288)
T ss_dssp ------------------------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHH
Confidence 001136799999999997654 8999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc-CCC--------------Cc-----------cccccCc-hHHHHHHHcCCCCCCCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRH-RVL--------------PP-----------QLLLKFP-KEASFCLWLLHPEPSGRP 353 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~-~~~--------------p~-----------~~~~~~p-~~~~li~~~L~~dP~~Rp 353 (720)
|++ ||............... +.. .+ .+....+ ...+||.+||++||++||
T Consensus 194 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 273 (288)
T 1ob3_A 194 MVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI 273 (288)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSC
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCC
Confidence 999 67665544333322211 000 00 0111233 345999999999999999
Q ss_pred ChHHHHcCcccCCC
Q 004998 354 KMGELLQSEFLNEP 367 (720)
Q Consensus 354 ta~eiL~hp~~~~~ 367 (720)
|+.|+|+||||++.
T Consensus 274 t~~e~l~hp~f~~~ 287 (288)
T 1ob3_A 274 TAKQALEHAYFKEN 287 (288)
T ss_dssp CHHHHHTSGGGGC-
T ss_pred CHHHHhcCcchhhc
Confidence 99999999999863
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=318.60 Aligned_cols=208 Identities=19% Similarity=0.256 Sum_probs=167.6
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 49 ~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~giv 124 (321)
T 1tki_A 49 KKEISILNIARHRNILHLHE-SFESME---ELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIG 124 (321)
T ss_dssp HHHHHHHHHSCCTTBCCEEE-EEEETT---EEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEeE-EEecCC---EEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 36788999999999999999 555543 68999999 88999999976666699999999999999999999999999
Q ss_pred eccCCCCcEEEcc--CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 144 VHNVRPSCFVMSS--FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 144 HrDLKP~NILl~~--~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||+|||++. ++.+||+|||++.......
T Consensus 125 H~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------- 158 (321)
T 1tki_A 125 HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD---------------------------------------------- 158 (321)
T ss_dssp CCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC----------------------------------------------
T ss_pred cCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC----------------------------------------------
Confidence 9999999999986 7899999888874321100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 159 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 193 (321)
T 1tki_A 159 ---------------------------------------------NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLV 193 (321)
T ss_dssp ---------------------------------------------EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHH
Confidence 00114689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCC--CccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|+|++ ||...... ..+..+..... ++......+ ...+|+.+||++||.+|||+.|+|+||||....
T Consensus 194 ~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~ 265 (321)
T 1tki_A 194 YVLLSGINPFLAETNQ-QIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKI 265 (321)
T ss_dssp HHHHHSSCTTCCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred HHHHhCCCCCcCCCHH-HHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence 99999 77665544 33444443332 222333444 445999999999999999999999999998763
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-35 Score=317.34 Aligned_cols=201 Identities=14% Similarity=0.198 Sum_probs=164.1
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++||+|
T Consensus 55 ~E~~~l~~l~hp~Iv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH 129 (318)
T 1fot_A 55 DERLMLSIVTHPFIIRMWG-TFQDAQ---QIFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSKDIIY 129 (318)
T ss_dssp HHHHHHHSCCBTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHhhCCCCCCceEeE-EEEeCC---EEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 6777899999999999999 555543 68999999 8999999996544 4999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.+|++||+|||++......
T Consensus 130 rDlkp~NIll~~~g~~kL~Dfg~a~~~~~~-------------------------------------------------- 159 (318)
T 1fot_A 130 RDLKPENILLDKNGHIKITDFGFAKYVPDV-------------------------------------------------- 159 (318)
T ss_dssp CCCCGGGEEECTTSCEEECCCSSCEECSSC--------------------------------------------------
T ss_pred cCCChheEEEcCCCCEEEeecCcceecCCc--------------------------------------------------
Confidence 999999999999999999988887321100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
....+||+.|+|||++.+..++.++|||||||++|||
T Consensus 160 -------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el 196 (318)
T 1fot_A 160 -------------------------------------------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEM 196 (318)
T ss_dssp -------------------------------------------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHH
Confidence 0014789999999999999999999999999999999
Q ss_pred cc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 305 FC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 305 lt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
++ ||...... ..+..+....+. ++..+ +...+||.+||..||.+|| +++++++||||+..
T Consensus 197 l~g~~pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~ 265 (318)
T 1fot_A 197 LAGYTPFYDSNTM-KTYEKILNAELR--FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 265 (318)
T ss_dssp HHSSCTTCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred HhCCCCCCCCCHH-HHHHHHHhCCCC--CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence 99 67665544 333333333221 12223 4456999999999999999 89999999999976
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=326.45 Aligned_cols=235 Identities=16% Similarity=0.199 Sum_probs=166.7
Q ss_pred eeeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.++. |||||++++ ++.... ...+|+||||.+++|.+++... .+++..+..++.||+.||.|||++|
T Consensus 54 ~~~~E~~~l~~l~~h~niv~l~~-~~~~~~-~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ 129 (388)
T 3oz6_A 54 RTFREIMILTELSGHENIVNLLN-VLRADN-DRDVYLVFDYMETDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLHSGG 129 (388)
T ss_dssp HHHHHHHHHHHTTTCTTBCCEEE-EEECTT-SSCEEEEEECCSEEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccCCCCCCeeee-EEecCC-CCEEEEEecccCcCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4557888999987 999999999 554332 2368999999778999999653 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++.......... ..
T Consensus 130 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~-----------------------------~~----------- 169 (388)
T 3oz6_A 130 LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTN-----------------------------NI----------- 169 (388)
T ss_dssp EECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCC-----------------------------CG-----------
T ss_pred EEeCCCCHHHeEEcCCCCEEecCCcccccccccccccc-----------------------------cc-----------
Confidence 99999999999999999999999999865422110000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvl 300 (720)
+.......... ..........+||++|+|||++.+ ..|+.++|||||||+
T Consensus 170 ---------------~~~~~~~~~~~--------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~i 220 (388)
T 3oz6_A 170 ---------------PLSINENTENF--------------DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCI 220 (388)
T ss_dssp ---------------GGCCC-----------------------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHH
T ss_pred ---------------ccccccccccc--------------ccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHH
Confidence 00000000000 000001123589999999999987 558999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCcc--------------------------------c-------------cc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQ--------------------------------L-------------LL 332 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~--------------------------------~-------------~~ 332 (720)
+|||++ ||.+..........+.....|+. + ..
T Consensus 221 l~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (388)
T 3oz6_A 221 LGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKAD 300 (388)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCC
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhccccccccc
Confidence 999999 67665544333222221111110 0 02
Q ss_pred cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 333 KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 333 ~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
..+...+||.+||.+||.+|||+.|+|+||||+....+
T Consensus 301 ~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~~~ 338 (388)
T 3oz6_A 301 CNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNP 338 (388)
T ss_dssp CCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTCCG
T ss_pred CCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhcCC
Confidence 23445699999999999999999999999999876544
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-35 Score=314.64 Aligned_cols=207 Identities=18% Similarity=0.269 Sum_probs=165.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ ++.+.. .+|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++||
T Consensus 61 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i 135 (326)
T 2y0a_A 61 IEREVSILKEIQHPNVITLHE-VYENKT---DVILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLHSLQI 135 (326)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCCcEEE-EEEeCC---EEEEEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 347888999999999999999 555543 67999999 799999999544 459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCC----ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 143 VVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 143 vHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||||||+|||++.++ .+||+|||++.......
T Consensus 136 vH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------- 172 (326)
T 2y0a_A 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN------------------------------------------- 172 (326)
T ss_dssp ECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS-------------------------------------------
T ss_pred EcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC-------------------------------------------
Confidence 9999999999999877 79998888874321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 173 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 204 (326)
T 2y0a_A 173 ------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 204 (326)
T ss_dssp ------------------------------------------------CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHH
T ss_pred ------------------------------------------------ccccccCCcCcCCceeecCCCCCcHHHHHHHH
Confidence 00114689999999999988899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhc--CCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+.. ..+++......+. ..+||.+||++||.+|||+.|+|+||||...
T Consensus 205 ~il~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~ 278 (326)
T 2y0a_A 205 VITYILLSGASPFLGDTKQ-ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278 (326)
T ss_dssp HHHHHHHHSCCSSCCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred HHHHHHHHCcCCCCCCCHH-HHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence 99999999 67655443 23333332 2233333334444 4599999999999999999999999999875
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-35 Score=317.84 Aligned_cols=206 Identities=18% Similarity=0.266 Sum_probs=165.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++||
T Consensus 52 ~~~E~~~l~~l~hp~iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~i 126 (337)
T 1o6l_A 52 TVTESRVLQNTRHPFLTALKY-AFQTHD---RLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRDV 126 (337)
T ss_dssp HHHHHHHHHSCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCcCcceEE-EEEeCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346777899999999999999 555543 68999999 8999999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.+|++||+|||+++.......
T Consensus 127 vHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~---------------------------------------------- 160 (337)
T 1o6l_A 127 VYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA---------------------------------------------- 160 (337)
T ss_dssp BCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC----------------------------------------------
T ss_pred ecCcCCHHHEEECCCCCEEEeeccchhhcccCCC----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+||+.|+|||++.+..++.++|||||||++|
T Consensus 161 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 196 (337)
T 1o6l_A 161 --------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 196 (337)
T ss_dssp --------------------------------------------CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHH
T ss_pred --------------------------------------------cccccccChhhCChhhhcCCCCCchhhcccchhHHH
Confidence 001147899999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
||++ ||...... .....+....+ .++.. .+...+||.+||+.||.+|| ++.|+++||||...
T Consensus 197 ell~g~~Pf~~~~~~-~~~~~i~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~ 267 (337)
T 1o6l_A 197 EMMCGRLPFYNQDHE-RLFELILMEEI--RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp HHHHSSCSSCCSSHH-HHHHHHHHCCC--CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHhcCCCCCCCCCHH-HHHHHHHcCCC--CCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence 9999 77665443 33333333221 12222 34455999999999999999 89999999999876
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-35 Score=321.34 Aligned_cols=208 Identities=19% Similarity=0.225 Sum_probs=165.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 74 ~~~~E~~il~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ 148 (362)
T 2bdw_A 74 KLEREARICRKLQHPNIVRLHD-SIQEES---FHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCHSNG 148 (362)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEEeCC---EEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555543 67999999 889999999554 35999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC---ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.++ .+||+|||++.......
T Consensus 149 ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~------------------------------------------- 185 (362)
T 2bdw_A 149 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE------------------------------------------- 185 (362)
T ss_dssp CBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC-------------------------------------------
T ss_pred eEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc-------------------------------------------
Confidence 99999999999998654 59999888874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 186 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 217 (362)
T 2bdw_A 186 ------------------------------------------------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACG 217 (362)
T ss_dssp ------------------------------------------------SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHH
T ss_pred ------------------------------------------------ccccCCCCccccCHHHHccCCCCchhhHHHHH
Confidence 00114689999999999998899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+..+. ++....... +...+||.+||++||.+|||+.|+|+||||...
T Consensus 218 ~il~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~ 291 (362)
T 2bdw_A 218 VILYILLVGYPPFWDEDQH-RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR 291 (362)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred HHHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence 99999999 66655443 3444444332 233333333 445599999999999999999999999999763
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-35 Score=332.06 Aligned_cols=244 Identities=15% Similarity=0.194 Sum_probs=162.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++++.... .....+|+||||.+++|.+++.... .+++..++.|++||+.||.|||++|
T Consensus 98 ~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ 176 (458)
T 3rp9_A 98 RILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPV-YLTELHIKTLLYNLLVGVKYVHSAG 176 (458)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCSEEHHHHHHSSC-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEeccccchhhhcccCC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4447889999999999999999443222 3345689999998899999996544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+||||+.++.+||+|||+++..+.......... .........+.+|+...
T Consensus 177 iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~------- 234 (458)
T 3rp9_A 177 ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLP---------------ISPREDDMNLVTFPHTK------- 234 (458)
T ss_dssp CBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------------------
T ss_pred cCCCCCChhhEEECCCCCEeecccccchhccCccccccccc---------------cCccccccccccccccc-------
Confidence 99999999999999999999999999976543311100000 00000000000110000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-CCCCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~s~~sDIwSLGvl 300 (720)
......+..+||++|+|||++. +..|+.++|||||||+
T Consensus 235 -----------------------------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~i 273 (458)
T 3rp9_A 235 -----------------------------------------NLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCI 273 (458)
T ss_dssp ---------------------------------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHH
T ss_pred -----------------------------------------cccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHH
Confidence 0000112368999999999864 5569999999999999
Q ss_pred hhhccc--------------cCCCCch-------------------HHHHHHHhhc--C--------------------C
Q 004998 301 LFELFC--------------PFSTGEE-------------------KTRTMSSLRH--R--------------------V 325 (720)
Q Consensus 301 l~eLlt--------------pf~~~~~-------------------~~~~~~~l~~--~--------------------~ 325 (720)
||||++ +|.+... ....+..+.. + .
T Consensus 274 l~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~ 353 (458)
T 3rp9_A 274 FAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRI 353 (458)
T ss_dssp HHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTT
T ss_pred HHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHh
Confidence 999996 1222110 0000110000 0 0
Q ss_pred C--------CccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 326 L--------PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 326 ~--------p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
+ ...+....+...+||.+||.+||.+|||++|+|+||||+.....
T Consensus 354 ~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~ 406 (458)
T 3rp9_A 354 FPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIA 406 (458)
T ss_dssp SCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCG
T ss_pred cCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCC
Confidence 0 01112224455699999999999999999999999999987554
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-36 Score=324.61 Aligned_cols=204 Identities=17% Similarity=0.284 Sum_probs=162.1
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..+|..+ +||||+++++ ++.+.. .+|+|||| .|++|.+++.+.. .+++.+++.|+.||+.||.|||++||+
T Consensus 72 ~E~~il~~~~~hp~Iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~giv 146 (353)
T 3txo_A 72 TEKRILSLARNHPFLTQLFC-CFQTPD---RLFFVMEFVNGGDLMFHIQKSR-RFDEARARFYAAEIISALMFLHDKGII 146 (353)
T ss_dssp HHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHhccCCCceeeEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 566677776 7999999999 565554 58999999 8999999995543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.+|++||+|||+++......
T Consensus 147 HrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~------------------------------------------------ 178 (353)
T 3txo_A 147 YRDLKLDNVLLDHEGHCKLADFGMCKEGICNG------------------------------------------------ 178 (353)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCBCSCC--------------------------------------------------
T ss_pred ccCCCHHHEEECCCCCEEEccccceeecccCC------------------------------------------------
Confidence 99999999999999999999998874321100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......+||+.|+|||++.+..|+.++|||||||++||
T Consensus 179 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 216 (353)
T 3txo_A 179 ------------------------------------------VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYE 216 (353)
T ss_dssp -------------------------------------------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHH
T ss_pred ------------------------------------------ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHH
Confidence 00012478999999999998889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCC-CccccccCchHHHHHHHcCCCCCCCCCCh------HHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~-p~~~~~~~p~~~~li~~~L~~dP~~Rpta------~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+....+ .|. ...+...+||.+||.+||.+||++ .|+++||||+..
T Consensus 217 ll~G~~Pf~~~~~~-~~~~~i~~~~~~~p~--~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~ 287 (353)
T 3txo_A 217 MLCGHAPFEAENED-DLFEAILNDEVVYPT--WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI 287 (353)
T ss_dssp HHHSSCSSCCSSHH-HHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred HHhCCCCCCCCCHH-HHHHHHHcCCCCCCC--CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence 999 77766554 34444443322 111 123455699999999999999998 899999999986
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-35 Score=307.75 Aligned_cols=211 Identities=14% Similarity=0.148 Sum_probs=171.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++.+.........+|+|||| .+++|.+++... ..+++..++.++.||+.||.|||++|
T Consensus 71 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ 149 (290)
T 1t4h_A 71 RFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLHTRT 149 (290)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 3347888999999999999999444444444568999999 789999999553 34999999999999999999999999
Q ss_pred --ceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 --IVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 --IvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++ .++.+||+|||.+......
T Consensus 150 ~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~-------------------------------------------- 185 (290)
T 1t4h_A 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-------------------------------------------- 185 (290)
T ss_dssp SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT--------------------------------------------
T ss_pred CCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc--------------------------------------------
Confidence 99999999999998 7899999988877321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+. ++.++||||||
T Consensus 186 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG 216 (290)
T 1t4h_A 186 ------------------------------------------------FAKAVIGTPEFMAPEMYEEK-YDESVDVYAFG 216 (290)
T ss_dssp ------------------------------------------------SBEESCSSCCCCCGGGGGTC-CCTHHHHHHHH
T ss_pred ------------------------------------------------ccccccCCcCcCCHHHHhcc-CCCcchHHHHH
Confidence 00114689999999998754 89999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||............+.....+..+....+ ...+||.+||++||.+|||+.|+|+||||++.
T Consensus 217 ~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~ 289 (290)
T 1t4h_A 217 MCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE 289 (290)
T ss_dssp HHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred HHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence 99999999 77766666666666766666666655554 45699999999999999999999999999864
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-35 Score=330.26 Aligned_cols=209 Identities=15% Similarity=0.196 Sum_probs=166.8
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.++|.+....+++..++.|+.||+.||.|||++||||
T Consensus 123 ~E~~il~~~~hp~Iv~l~~-~~~~~~---~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiH 198 (437)
T 4aw2_A 123 EERDVLVNGDSKWITTLHY-AFQDDN---NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVH 198 (437)
T ss_dssp HHHHHHHHSCTTTBCCEEE-EEECSS---EEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCEEEEEE-EEeeCC---EEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEe
Confidence 5666888999999999999 665554 57999999 899999999775566999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+||||+.++++||+|||+++.......
T Consensus 199 rDLKp~NILl~~~g~vkL~DFGla~~~~~~~~------------------------------------------------ 230 (437)
T 4aw2_A 199 RDIKPDNILMDMNGHIRLADFGSCLKLMEDGT------------------------------------------------ 230 (437)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECCTTSC------------------------------------------------
T ss_pred cccCHHHeeEcCCCCEEEcchhhhhhcccCCC------------------------------------------------
Confidence 99999999999999999999988743211100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-----CCCCCccccchhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGV 299 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSLGv 299 (720)
......+||++|+|||++. ...|+.++|||||||
T Consensus 231 -----------------------------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGv 269 (437)
T 4aw2_A 231 -----------------------------------------VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGV 269 (437)
T ss_dssp -----------------------------------------EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHH
T ss_pred -----------------------------------------cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHH
Confidence 0001147999999999997 455899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh---cCCCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLR---HRVLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~---~~~~p~~~~~~~p~~~~li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||............+. ...+|.......+...+||.+||..+|.+ ||+++|+++||||+..
T Consensus 270 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i 345 (437)
T 4aw2_A 270 CMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGI 345 (437)
T ss_dssp HHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTC
T ss_pred HHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCC
Confidence 9999999 7776554433222222 22344443344456669999999998888 9999999999999986
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.5e-35 Score=314.20 Aligned_cols=220 Identities=15% Similarity=0.207 Sum_probs=166.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCC-----CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAA-----IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~-----~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
+..+|..+|..++||||+++++ ++..... ...+|+||||.+++|.+.+......+++.+++.++.||+.||.||
T Consensus 62 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~L 140 (351)
T 3mi9_A 62 TALREIKILQLLKHENVVNLIE-ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYI 140 (351)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEEEC--------CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCcccHhh-eeeccccccccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 3447888999999999999999 5544321 346899999977799999977666799999999999999999999
Q ss_pred HHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|++||+||||||+|||++.++.+||+|||++.........
T Consensus 141 H~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~---------------------------------------- 180 (351)
T 3mi9_A 141 HRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS---------------------------------------- 180 (351)
T ss_dssp HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSS----------------------------------------
T ss_pred HHCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccc----------------------------------------
Confidence 9999999999999999999999999999988543221000
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwS 296 (720)
.+.......||+.|+|||++.+. .++.++||||
T Consensus 181 ----------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diws 214 (351)
T 3mi9_A 181 ----------------------------------------------QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWG 214 (351)
T ss_dssp ----------------------------------------------SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHH
T ss_pred ----------------------------------------------cccccCCcccccCccCchhhcCCCCCCcHhHHHH
Confidence 00000124789999999999874 4899999999
Q ss_pred hhhhhhhccc---cCCCCchHHHHH--HHhhcCCCCcccccc-----------------------------CchHHHHHH
Q 004998 297 LGVLLFELFC---PFSTGEEKTRTM--SSLRHRVLPPQLLLK-----------------------------FPKEASFCL 342 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~--~~l~~~~~p~~~~~~-----------------------------~p~~~~li~ 342 (720)
|||++|||++ ||.......... ..+. +.+++..... .+...+||.
T Consensus 215 lG~il~ell~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 293 (351)
T 3mi9_A 215 AGCIMAEMWTRSPIMQGNTEQHQLALISQLC-GSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLID 293 (351)
T ss_dssp HHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHH
Confidence 9999999999 666554332221 1121 2222221111 234569999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 343 WLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
+||++||.+|||+.|+|+||||.....+
T Consensus 294 ~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 321 (351)
T 3mi9_A 294 KLLVLDPAQRIDSDDALNHDFFWSDPMP 321 (351)
T ss_dssp HHSCSSGGGSCCHHHHHTSGGGGSSSCC
T ss_pred HHhcCChhhCCCHHHHhCCCCcCCCCCc
Confidence 9999999999999999999999876443
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=319.23 Aligned_cols=202 Identities=13% Similarity=0.124 Sum_probs=165.3
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++||+
T Consensus 89 ~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~iv 163 (350)
T 1rdq_E 89 LNEKRILQAVNFPFLVKLEF-SFKDNS---NLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSLDLI 163 (350)
T ss_dssp HHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEEcCC---EEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36778999999999999999 555543 68999999 8999999996543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.+|++||+|||++......
T Consensus 164 HrDlkp~NIll~~~g~~kL~DFg~a~~~~~~------------------------------------------------- 194 (350)
T 1rdq_E 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------------------------------------------------- 194 (350)
T ss_dssp CCCCSGGGEEECTTSCEEECCCTTCEECSSC-------------------------------------------------
T ss_pred cccCccceEEECCCCCEEEcccccceeccCC-------------------------------------------------
Confidence 9999999999999999999988887322100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
....+||+.|+|||++.+..++.++|||||||++||
T Consensus 195 --------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 230 (350)
T 1rdq_E 195 --------------------------------------------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYE 230 (350)
T ss_dssp --------------------------------------------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhH
Confidence 011478999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+..+.++ ++..+ +...+||.+||+.||.+||+ +.||++||||...
T Consensus 231 ll~g~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~ 300 (350)
T 1rdq_E 231 MAAGYPPFFADQPI-QIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp HHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred HhhCCCCCCCCCHH-HHHHHHHcCCCC--CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence 999 67665443 444444443221 22233 44559999999999999998 9999999999875
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-36 Score=323.03 Aligned_cols=206 Identities=17% Similarity=0.209 Sum_probs=161.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|..++||||+++++ ++.... .+|+||||.+++|.+++...+ .+++.+++.++.||+.||.|||++||
T Consensus 55 ~~~~E~~~l~~l~hpnIv~l~~-~~~~~~---~~~lv~E~~~g~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH~~gi 129 (336)
T 3h4j_B 55 RVEREISYLKLLRHPHIIKLYD-VITTPT---DIVMVIEYAGGELFDYIVEKK-RMTEDEGRRFFQQIICAIEYCHRHKI 129 (336)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEEeCC---EEEEEEECCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 4457888999999999999999 555543 579999998899999995443 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++...... .+
T Consensus 130 vH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~----------------------------------~~------------ 163 (336)
T 3h4j_B 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDG----------------------------------NF------------ 163 (336)
T ss_dssp CCCCCSTTTEEECTTCCEEECCSSCTBTTTTS----------------------------------BT------------
T ss_pred EecCCchhhEEEcCCCCEEEEEeccceeccCC----------------------------------cc------------
Confidence 99999999999999999999999887432111 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvll 301 (720)
....+||+.|+|||++.+..+ ++++|||||||++
T Consensus 164 ---------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il 198 (336)
T 3h4j_B 164 ---------------------------------------------LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVL 198 (336)
T ss_dssp ---------------------------------------------TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHH
Confidence 011468999999999998875 7899999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||...... .....+.... ..++.. .+...+||.+||.+||.+|||+.|+++||||+..
T Consensus 199 ~~ll~g~~Pf~~~~~~-~~~~~i~~~~--~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 199 YVMLVGRLPFDDEFIP-NLFKKVNSCV--YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN 265 (336)
T ss_dssp HHHHHSSCSSBCSSST-TCBCCCCSSC--CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred HHHHhCCCCCCCccHH-HHHHHHHcCC--CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence 99999 66543221 1111111111 112222 3445599999999999999999999999999865
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-35 Score=326.78 Aligned_cols=208 Identities=18% Similarity=0.230 Sum_probs=166.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++.++..++.||+.||.|||++|
T Consensus 56 ~~~~E~~il~~l~hpnIv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH~~g 130 (444)
T 3soa_A 56 KLEREARICRLLKHPNIVRLHD-SISEEG---HHYLIFDLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCHQMG 130 (444)
T ss_dssp HHHHHHHHHHHCCBTTBCCEEE-EEECSS---EEEEEECCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcCCCeEEE-EEEECC---EEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555543 67999999 8999999995544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEc---cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++ .++.+||+|||++........
T Consensus 131 ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~------------------------------------------ 168 (444)
T 3soa_A 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ------------------------------------------ 168 (444)
T ss_dssp CBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC------------------------------------------
T ss_pred ccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc------------------------------------------
Confidence 99999999999998 457899999888743321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..|+.++||||||
T Consensus 169 ------------------------------------------------~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlG 200 (444)
T 3soa_A 169 ------------------------------------------------AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACG 200 (444)
T ss_dssp ------------------------------------------------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred ------------------------------------------------eeecccCCcccCCHHHhcCCCCCCccccHHHH
Confidence 00114789999999999998899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCC--CCcccc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~-~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|++|+|++ ||...... .....+..+. ++.... ...+...+||.+||++||.+|||+.|+|+||||+.
T Consensus 201 vilyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~ 273 (444)
T 3soa_A 201 VILYILLVGYPPFWDEDQH-RLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH 273 (444)
T ss_dssp HHHHHHHHSSCSCCCSSHH-HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHH
T ss_pred HHHHHHHhCCCCCCCccHH-HHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccC
Confidence 99999999 66555443 3444444433 222222 33345559999999999999999999999999975
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-35 Score=318.56 Aligned_cols=207 Identities=16% Similarity=0.148 Sum_probs=166.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..+|.+++|||||++++ ++.... ..|+||||..++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 101 ~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv 176 (348)
T 1u5q_A 101 IIKEVRFLQKLRHPNTIQYRG-CYLREH---TAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 176 (348)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEEECC---eEEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 347888999999999999999 554443 6799999966899998855455699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++......
T Consensus 177 H~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~------------------------------------------------- 207 (348)
T 1u5q_A 177 HRDVKAGNILLSEPGLVKLGDFGSASIMAPA------------------------------------------------- 207 (348)
T ss_dssp CCCCSGGGEEEETTTEEEECCCTTCBSSSSB-------------------------------------------------
T ss_pred eCCCCHHHEEECCCCCEEEeeccCceecCCC-------------------------------------------------
Confidence 9999999999999999999988877332100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CCCCCccccchhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLGvl 300 (720)
....||+.|+|||++. +..++.++|||||||+
T Consensus 208 ---------------------------------------------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~i 242 (348)
T 1u5q_A 208 ---------------------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 242 (348)
T ss_dssp ---------------------------------------------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHH
T ss_pred ---------------------------------------------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHH
Confidence 0136899999999985 4558999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~-~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||++ ||.......... .+.....+......++.. .+||.+||+.||.+|||+.++|+||||.....
T Consensus 243 l~ell~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~~ 314 (348)
T 1u5q_A 243 CIELAERKPPLFNMNAMSALY-HIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERP 314 (348)
T ss_dssp HHHHHHSSCTTTTSCHHHHHH-HHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCCC
T ss_pred HHHHHhCCCCCCCCChHHHHH-HHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccCC
Confidence 999999 666655443333 333333443333445544 49999999999999999999999999987643
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-35 Score=322.87 Aligned_cols=206 Identities=16% Similarity=0.213 Sum_probs=162.9
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|..++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++..++.|+.||+.||.|||++||
T Consensus 62 ~~~E~~il~~l~hp~Iv~l~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~gi 136 (384)
T 4fr4_A 62 VFKELQIMQGLEHPFLVNLWY-SFQDEE---DMFMVVDLLLGGDLRYHLQQNV-HFKEETVKLFICELVMALDYLQNQRI 136 (384)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHTTC-CCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCCcEEE-EEEeCC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 336888999999999999999 565543 57999999 8999999996543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.+|++||+|||++.......
T Consensus 137 vHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~----------------------------------------------- 169 (384)
T 4fr4_A 137 IHRDMKPDNILLDEHGHVHITDFNIAAMLPRET----------------------------------------------- 169 (384)
T ss_dssp ECCCCSGGGEEECTTSCEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred eeccCcHHHeEECCCCCEEEeccceeeeccCCC-----------------------------------------------
Confidence 999999999999999999999998874321110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC---CCCCccccchhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLGV 299 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+ ..|+.++|||||||
T Consensus 170 --------------------------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~ 205 (384)
T 4fr4_A 170 --------------------------------------------QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGV 205 (384)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHH
T ss_pred --------------------------------------------ceeccCCCccccCCeeeccCCCCCCCccceeechHH
Confidence 0011478999999999974 34899999999999
Q ss_pred hhhhccc---cCCCC--chHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-hHHHHcCcccCCC
Q 004998 300 LLFELFC---PFSTG--EEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-MGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~--~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpt-a~eiL~hp~~~~~ 367 (720)
++|||++ ||... .........+..... .++..+ +...+||.+||++||.+||+ +.++++||||...
T Consensus 206 il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~ 278 (384)
T 4fr4_A 206 TAYELLRGRRPYHIRSSTSSKEIVHTFETTVV--TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDI 278 (384)
T ss_dssp HHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred HHHHHHhCCCCCCCCCCccHHHHHHHHhhccc--CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence 9999999 67532 222233333332221 122233 44559999999999999998 8999999999986
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-35 Score=321.10 Aligned_cols=211 Identities=18% Similarity=0.282 Sum_probs=167.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 94 ~~~~E~~il~~l~hpnIv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~g 169 (387)
T 1kob_A 94 TVKNEISIMNQLHHPKLINLHD-AFEDKY---EMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS 169 (387)
T ss_dssp HHHHHHHHHTTCCSTTBCCEEE-EEECSS---EEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcCCCeEEE-EEEeCC---EEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3347888999999999999999 555543 68999999 899999999766656999999999999999999999999
Q ss_pred ceeccCCCCcEEEcc--CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 142 IVVHNVRPSCFVMSS--FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 142 IvHrDLKP~NILl~~--~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|+||||||+|||++. .+.+||+|||++.......
T Consensus 170 ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~-------------------------------------------- 205 (387)
T 1kob_A 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-------------------------------------------- 205 (387)
T ss_dssp EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS--------------------------------------------
T ss_pred eeecccchHHeEEecCCCCceEEEecccceecCCCc--------------------------------------------
Confidence 999999999999974 4679999888874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 206 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~ 238 (387)
T 1kob_A 206 -----------------------------------------------IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGV 238 (387)
T ss_dssp -----------------------------------------------CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHH
T ss_pred -----------------------------------------------ceeeeccCCCccCchhccCCCCCCcccEeeHhH
Confidence 001136899999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcC--CCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~--~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
++|||++ ||...... .....+... .+++.....+ +...+||.+||+.||.+|||+.|+|+||||+....
T Consensus 239 il~elltg~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 313 (387)
T 1kob_A 239 LGYVLLSGLSPFAGEDDL-ETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS 313 (387)
T ss_dssp HHHHHHHSCCSSCCSSHH-HHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred HHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccCCcc
Confidence 9999999 67665443 333333332 2233333333 44569999999999999999999999999987643
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-35 Score=321.94 Aligned_cols=204 Identities=18% Similarity=0.255 Sum_probs=162.8
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..+|..+ +||||+++++ ++.+.. .+|+|||| .|++|.+++.+.+ .+++.+++.++.||+.||.|||++||+
T Consensus 66 ~E~~il~~~~~hp~iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~iv 140 (345)
T 1xjd_A 66 VEKRVLSLAWEHPFLTHMFC-TFQTKE---NLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSKGIV 140 (345)
T ss_dssp HHHHHHHHHTTCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHhcCCCCCCCcEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 555667664 8999999999 565543 58999999 8999999995543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.+|++||+|||+++...... .
T Consensus 141 HrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~----------------------------------~------------- 173 (345)
T 1xjd_A 141 YRDLKLDNILLDKDGHIKIADFGMCKENMLGD----------------------------------A------------- 173 (345)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCBCCCCTT----------------------------------C-------------
T ss_pred eCCCChhhEEECCCCCEEEeEChhhhhcccCC----------------------------------C-------------
Confidence 99999999999999999999998874321000 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....+||+.|+|||++.+..++.++|||||||++||
T Consensus 174 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 210 (345)
T 1xjd_A 174 -------------------------------------------KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 210 (345)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHH
Confidence 0011478999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChH-HHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMG-ELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~-eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+..... .++... +...+||.+||+.||.+||++. +|++||||+..
T Consensus 211 ll~g~~Pf~~~~~~-~~~~~i~~~~~--~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~ 276 (345)
T 1xjd_A 211 MLIGQSPFHGQDEE-ELFHSIRMDNP--FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 276 (345)
T ss_dssp HHHSSCSSCCSSHH-HHHHHHHHCCC--CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred HhcCCCCCCCCCHH-HHHHHHHhCCC--CCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCC
Confidence 999 77665443 34444443321 122223 4445999999999999999998 99999999986
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=312.21 Aligned_cols=208 Identities=15% Similarity=0.165 Sum_probs=159.5
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+|.+++||||+++++ ++.... .+++|||| .|++|.+++... ..+++.+++.++.||+.||.|||++||+|
T Consensus 97 ~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH 171 (349)
T 2w4o_A 97 TEIGVLLRLSHPNIIKLKE-IFETPT---EISLVLELVTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLHENGIVH 171 (349)
T ss_dssp --CHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhCCCCCCcceee-eEecCC---eEEEEEEeCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 6777999999999999999 555443 57999999 899999999554 34999999999999999999999999999
Q ss_pred ccCCCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 145 HNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 145 rDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|||||+|||++. ++.+||+|||++.......
T Consensus 172 ~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------- 205 (349)
T 2w4o_A 172 RDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV---------------------------------------------- 205 (349)
T ss_dssp CCCCGGGEEESSSSTTCCEEECCCC-------------------------------------------------------
T ss_pred cCCCcccEEEecCCCCCCEEEccCccccccCccc----------------------------------------------
Confidence 999999999975 8899999888874321100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 206 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 240 (349)
T 2w4o_A 206 ---------------------------------------------LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIIT 240 (349)
T ss_dssp ----------------------------------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCCCccCHHHhcCCCCCcccchHHHHHHH
Confidence 00114689999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCC--CccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|||++ ||............+..... ++......+ ...+||.+||.+||.+|||+.|+|+||||.....
T Consensus 241 ~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~ 314 (349)
T 2w4o_A 241 YILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAA 314 (349)
T ss_dssp HHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTC
T ss_pred HHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCcc
Confidence 99999 67655544444444444322 222223334 4559999999999999999999999999997643
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-35 Score=321.39 Aligned_cols=205 Identities=18% Similarity=0.276 Sum_probs=160.8
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..+|.++ +|||||++++ ++.+.. .+|+|||| .|++|.+++.+.. .+++..++.|+.||+.||.|||++|||
T Consensus 101 ~E~~il~~~~~hp~Iv~l~~-~~~~~~---~~~lV~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~giv 175 (396)
T 4dc2_A 101 TEKHVFEQASNHPFLVGLHS-CFQTES---RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERGII 175 (396)
T ss_dssp HHHHHHHHHTTCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHhcCCCCCcCeeEE-EEEECC---EEEEEEEcCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 566677665 8999999999 665543 68999999 8999999995543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.+|++||+|||+++...... +
T Consensus 176 HrDLKp~NILl~~~g~ikL~DFGla~~~~~~~---------------------------------~-------------- 208 (396)
T 4dc2_A 176 YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------------------------D-------------- 208 (396)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---------------------------------C--------------
T ss_pred eccCCHHHEEECCCCCEEEeecceeeecccCC---------------------------------C--------------
Confidence 99999999999999999999999874311100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....+||+.|+|||++.+..|+.++|||||||++||
T Consensus 209 -------------------------------------------~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllye 245 (396)
T 4dc2_A 209 -------------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFE 245 (396)
T ss_dssp -------------------------------------------CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHH
Confidence 0012579999999999999999999999999999999
Q ss_pred ccc---cCCCCc--------hHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCCh------HHHHcCcccC
Q 004998 304 LFC---PFSTGE--------EKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKM------GELLQSEFLN 365 (720)
Q Consensus 304 Llt---pf~~~~--------~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpta------~eiL~hp~~~ 365 (720)
|++ ||.... ........+....+ .++. ..+...+||.+||++||.+||++ .||++||||+
T Consensus 246 ll~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~ 323 (396)
T 4dc2_A 246 MMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 323 (396)
T ss_dssp HHHSSCSSTTTTC------CCHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTT
T ss_pred HHhCCCCCcccccccccchhhHHHHHHHHhcccc--CCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCcccc
Confidence 999 664221 11223333333221 1222 23445699999999999999985 7999999999
Q ss_pred CC
Q 004998 366 EP 367 (720)
Q Consensus 366 ~~ 367 (720)
..
T Consensus 324 ~i 325 (396)
T 4dc2_A 324 NV 325 (396)
T ss_dssp TC
T ss_pred CC
Confidence 86
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-35 Score=325.77 Aligned_cols=206 Identities=16% Similarity=0.195 Sum_probs=163.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..++..++|||||++++ ++.+.. .+|+|||| .|++|.+++.+. .+++..++.++.||+.||.|||++||||
T Consensus 118 ~E~~il~~l~hp~Iv~l~~-~~~~~~---~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH~~givH 191 (410)
T 3v8s_A 118 EERDIMAFANSPWVVQLFY-AFQDDR---YLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIH 191 (410)
T ss_dssp HHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhCCCCCCCeEEE-EEEECC---EEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEe
Confidence 5667899999999999999 565543 68999999 799999999653 3999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.+|++||+|||++.........
T Consensus 192 rDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~----------------------------------------------- 224 (410)
T 3v8s_A 192 RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV----------------------------------------------- 224 (410)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECCTTSEE-----------------------------------------------
T ss_pred ccCCHHHeeECCCCCEEEeccceeEeeccCCcc-----------------------------------------------
Confidence 999999999999999999999888432211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC----CCccccchhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----VSCASDIYRLGVL 300 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+.. |+.++|||||||+
T Consensus 225 ------------------------------------------~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvi 262 (410)
T 3v8s_A 225 ------------------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF 262 (410)
T ss_dssp ------------------------------------------ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHH
T ss_pred ------------------------------------------cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHH
Confidence 001247999999999998765 8899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcC---CCCccccccCchHHHHHHHcCCCCCCC--CCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHR---VLPPQLLLKFPKEASFCLWLLHPEPSG--RPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~---~~p~~~~~~~p~~~~li~~~L~~dP~~--Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... .....+... ...|......+...+||.+||..+|.+ ||+++||++||||+..
T Consensus 263 lyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~ 336 (410)
T 3v8s_A 263 LYEMLVGDTPFYADSLV-GTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND 336 (410)
T ss_dssp HHHHHHSSCTTCCSSHH-HHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCS
T ss_pred HHHHHhCCCCCCCCChh-hHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCC
Confidence 999999 77665544 333333321 112222223345569999999999988 9999999999999986
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-35 Score=307.11 Aligned_cols=207 Identities=14% Similarity=0.169 Sum_probs=161.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|.+++||||+++++ ++.+.. ...+|+|||| .+++|.+++.. ..+++.+++.++.||+.||.|||++||+
T Consensus 84 ~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~iv 159 (298)
T 2zv2_A 84 YQEIAILKKLDHPNVVKLVE-VLDDPN-EDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLHYQKII 159 (298)
T ss_dssp HHHHHHHHTCCCTTBCCEEE-EEECSS-SSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEEcCC-CCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 47888999999999999999 554422 2368999999 88999886633 3599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++........
T Consensus 160 H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 192 (298)
T 2zv2_A 160 HRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA----------------------------------------------- 192 (298)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCEECSSSSC-----------------------------------------------
T ss_pred ccCCCHHHEEECCCCCEEEecCCCccccccccc-----------------------------------------------
Confidence 999999999999999999999988743211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC---CCccccchhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYRLGVL 300 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+.. ++.++|||||||+
T Consensus 193 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~ 229 (298)
T 2zv2_A 193 -------------------------------------------LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVT 229 (298)
T ss_dssp -------------------------------------------EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHH
Confidence 001146899999999998765 4788999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCcc-ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQ-LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~-~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
+|||++ ||...... .....+.....+.. .....+...+||.+||++||.+|||+.|+|+||||+.
T Consensus 230 l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~ 298 (298)
T 2zv2_A 230 LYCFVFGQCPFMDERIM-CLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR 298 (298)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred HHHHHHCCCCCCCccHH-HHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence 999999 67655433 33333433333222 2223344569999999999999999999999999863
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-35 Score=314.66 Aligned_cols=210 Identities=13% Similarity=0.153 Sum_probs=164.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ ++.++. ..|+|||| .|++|.+++... ..+++.+++.++.||+.||.|||++||+
T Consensus 53 ~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH~~giv 127 (323)
T 3tki_A 53 KKEICINKMLNHENVVKFYG-HRREGN---IQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGIT 127 (323)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEecCC---eEEEEEEcCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36778999999999999999 555543 67999999 789999999544 3499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++.........
T Consensus 128 H~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~---------------------------------------------- 161 (323)
T 3tki_A 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRE---------------------------------------------- 161 (323)
T ss_dssp CSCCSGGGEEECTTCCEEECCCTTCEECEETTEE----------------------------------------------
T ss_pred ccccchHHEEEeCCCCEEEEEeeccceeccCCcc----------------------------------------------
Confidence 9999999999999999999999887432111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvll~ 302 (720)
.......||+.|+|||++.+..+ +.++|||||||++|
T Consensus 162 ------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ 199 (323)
T 3tki_A 162 ------------------------------------------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199 (323)
T ss_dssp ------------------------------------------CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHH
Confidence 00011478999999999988775 78999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcC-CCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHR-VLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~-~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|++ ||............+... ...+......+...+||.+||++||.+|||+.|+++||||+..
T Consensus 200 ~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~ 268 (323)
T 3tki_A 200 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 268 (323)
T ss_dssp HHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred HHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhccc
Confidence 9999 676544432333333322 2222233344455699999999999999999999999999875
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=313.68 Aligned_cols=208 Identities=19% Similarity=0.249 Sum_probs=163.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..+|..++..++|||||++++ ++.+.. .+|+|||| .|++|.+++.+ .+..+++..++.++.||+.||.|||+
T Consensus 73 ~~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~ 148 (351)
T 3c0i_A 73 LKREASICHMLKHPHIVELLE-TYSSDG---MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD 148 (351)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCcEEE-EEEeCC---EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 347788999999999999999 555543 68999999 88999988832 33458999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCc---eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
+||+||||||+|||++.++. +||+|||++...+....
T Consensus 149 ~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~---------------------------------------- 188 (351)
T 3c0i_A 149 NNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGL---------------------------------------- 188 (351)
T ss_dssp TTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSC----------------------------------------
T ss_pred CCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCe----------------------------------------
Confidence 99999999999999986654 99998888743321100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchh
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
.....+||+.|+|||++.+..++.++||||
T Consensus 189 --------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Diws 218 (351)
T 3c0i_A 189 --------------------------------------------------VAGGRVGTPHFMAPEVVKREPYGKPVDVWG 218 (351)
T ss_dssp --------------------------------------------------BCCCCCSCGGGCCHHHHTTCCBCTHHHHHH
T ss_pred --------------------------------------------------eecCCcCCcCccCHHHHcCCCCCchHhhHH
Confidence 001147899999999999988999999999
Q ss_pred hhhhhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++|+|++ ||..... .....+..+. .++......+ ...+||.+||++||.+|||+.|+|+||||+..
T Consensus 219 lG~il~~ll~g~~pf~~~~~--~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 293 (351)
T 3c0i_A 219 CGVILFILLSGCLPFYGTKE--RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKER 293 (351)
T ss_dssp HHHHHHHHHHSSCSSCSSHH--HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred HHHHHHHHHHCCCCCCCcHH--HHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence 9999999999 6665432 3334443333 2333333344 44599999999999999999999999999863
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=325.31 Aligned_cols=207 Identities=19% Similarity=0.221 Sum_probs=165.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 72 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ 146 (484)
T 3nyv_A 72 SLLREVQLLKQLDHPNIMKLYE-FFEDKG---YFYLVGEVYTGGELFDEIISRK-RFSEVDAARIIRQVLSGITYMHKNK 146 (484)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHTCS-CCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEeCC---EEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 565543 68999999 8999999996544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEE---ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||+ +.++.+||+|||++.......
T Consensus 147 ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~------------------------------------------- 183 (484)
T 3nyv_A 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK------------------------------------------- 183 (484)
T ss_dssp CCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC-------------------------------------------
T ss_pred eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc-------------------------------------------
Confidence 9999999999999 467889999888773321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||+.|+|||++.+ .|+.++||||||
T Consensus 184 ------------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG 214 (484)
T 3nyv_A 184 ------------------------------------------------KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTG 214 (484)
T ss_dssp ------------------------------------------------SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHH
T ss_pred ------------------------------------------------ccccCCCCccccCceeecC-CCCCcceeHHHH
Confidence 0011468999999999987 599999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p---~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+..+.++ +.+....+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 215 ~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~ 288 (484)
T 3nyv_A 215 VILYILLSGCPPFNGANEY-DILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTY 288 (484)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhccc
Confidence 99999999 77665544 344444444332 2222333445699999999999999999999999999864
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-35 Score=320.48 Aligned_cols=218 Identities=16% Similarity=0.113 Sum_probs=161.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .+++|.+++... ...+++..++.|+.||+.||.|||++
T Consensus 72 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~ 147 (389)
T 3gni_B 72 FLQGELHVSKLFNHPNIVPYRA-TFIADN---ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM 147 (389)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCCCcEeE-EEEECC---EEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3346888999999999999999 555443 68999999 899999999443 34599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||.+.... +.|.....
T Consensus 148 ~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~------------------------------------~~~~~~~~---- 187 (389)
T 3gni_B 148 GYVHRSVKASHILISVDGKVYLSGLRSNLSMI------------------------------------SHGQRQRV---- 187 (389)
T ss_dssp TEECCCCSGGGEEECTTCCEEECCGGGCEECE------------------------------------ETTEECSC----
T ss_pred CeecCCCCHHHEEEcCCCCEEEcccccceeec------------------------------------cccccccc----
Confidence 99999999999999999999999998873221 11000000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC--CCCCccccchhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLG 298 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~s~~sDIwSLG 298 (720)
........+||+.|+|||++.+ ..++.++||||||
T Consensus 188 -------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG 224 (389)
T 3gni_B 188 -------------------------------------------VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVG 224 (389)
T ss_dssp -------------------------------------------BCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHH
T ss_pred -------------------------------------------cccccccccccccccCHHHHhccCCCCCcHhHHHHHH
Confidence 0000011478999999999988 4699999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCC--------------------------------------------cccc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLP--------------------------------------------PQLL 331 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p--------------------------------------------~~~~ 331 (720)
|++|||++ ||............+.. ..+ ....
T Consensus 225 ~il~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (389)
T 3gni_B 225 ITACELANGHVPFKDMPATQMLLEKLNG-TVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYH 303 (389)
T ss_dssp HHHHHHHHSSCTTTTCCSTTHHHHC-------------------------------------------------------
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHhcC-CCCccccccccccccccccccccccccccccccccCccccccCCCCCCccc
Confidence 99999999 67654333222222211 100 0011
Q ss_pred c-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 332 L-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 332 ~-~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
. ..+...+||.+||++||.+|||+.|+|+||||+...
T Consensus 304 ~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~ 341 (389)
T 3gni_B 304 RTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIK 341 (389)
T ss_dssp --CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred cccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence 1 223445999999999999999999999999998764
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-35 Score=319.71 Aligned_cols=200 Identities=18% Similarity=0.219 Sum_probs=160.3
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Q 004998 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVR 148 (720)
Q Consensus 70 ~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLK 148 (720)
++..++|||||++++ ++.+.. .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++||+|||||
T Consensus 92 ll~~~~hp~Iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~givHrDlk 166 (373)
T 2r5t_A 92 LLKNVKHPFLVGLHF-SFQTAD---KLYFVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSLNIVYRDLK 166 (373)
T ss_dssp CBCCCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHhCCCCCCCCEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence 367799999999999 555543 68999999 8999999995543 49999999999999999999999999999999
Q ss_pred CCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccC
Q 004998 149 PSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQS 228 (720)
Q Consensus 149 P~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~ 228 (720)
|+|||++.+|++||+|||+++......
T Consensus 167 p~NIll~~~g~ikL~DFG~a~~~~~~~----------------------------------------------------- 193 (373)
T 2r5t_A 167 PENILLDSQGHIVLTDFGLCKENIEHN----------------------------------------------------- 193 (373)
T ss_dssp GGGEEECTTSCEEECCCCBCGGGBCCC-----------------------------------------------------
T ss_pred HHHEEECCCCCEEEeeCccccccccCC-----------------------------------------------------
Confidence 999999999999999998874210000
Q ss_pred CCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc--
Q 004998 229 SSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC-- 306 (720)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt-- 306 (720)
......+||+.|+|||++.+..++.++|||||||++|||++
T Consensus 194 -------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~ 236 (373)
T 2r5t_A 194 -------------------------------------STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGL 236 (373)
T ss_dssp -------------------------------------CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred -------------------------------------CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCC
Confidence 00012578999999999999999999999999999999999
Q ss_pred -cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCCh----HHHHcCcccCCC
Q 004998 307 -PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKM----GELLQSEFLNEP 367 (720)
Q Consensus 307 -pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta----~eiL~hp~~~~~ 367 (720)
||...... ..+..+....+ .+...+ +...+||.+||+.||.+||++ .++++||||+..
T Consensus 237 ~Pf~~~~~~-~~~~~i~~~~~--~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~ 300 (373)
T 2r5t_A 237 PPFYSRNTA-EMYDNILNKPL--QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLI 300 (373)
T ss_dssp CTTCCSBHH-HHHHHHHHSCC--CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred CCCCCCCHH-HHHHHHHhccc--CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCC
Confidence 77665544 34444443322 122233 344599999999999999986 699999999986
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-35 Score=320.74 Aligned_cols=214 Identities=16% Similarity=0.209 Sum_probs=156.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecC---CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~---~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|.+++||||+++++ ++... .....+|++||+.+++|.+++.. ..+++..++.++.||+.||.|||+
T Consensus 74 ~~~~E~~~l~~l~hpnIv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~ 150 (367)
T 2fst_X 74 RTYRELRLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIHS 150 (367)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSE-EECSCSSGGGCCCCEEEEECCCEECC-------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEecCCccccCCeEEEEecccCCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4447888999999999999999 54332 12245799999999999998854 349999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||+++..+..
T Consensus 151 ~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~--------------------------------------------- 185 (367)
T 2fst_X 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--------------------------------------------- 185 (367)
T ss_dssp TTCCCCCCCGGGEEECTTCCEEECC-------------------------------------------------------
T ss_pred CCeeeCCCCHhhEEECCCCCEEEeecccccccccc---------------------------------------------
Confidence 99999999999999999999999988887332100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
....+||++|+|||++.+ ..++.++||||||
T Consensus 186 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 217 (367)
T 2fst_X 186 ------------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 217 (367)
T ss_dssp -----------------------------------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHH
T ss_pred ------------------------------------------------CCCcCcCcCccChHHHcCCcCCCchhhHHHHH
Confidence 011478999999999987 5689999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhc-CCC-----------------------Cc-----cccccCchHHHHHHHcCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RVL-----------------------PP-----QLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~~~-----------------------p~-----~~~~~~p~~~~li~~~L~ 346 (720)
|++|||++ ||.+..........+.. +.. +. .+....+...+||.+||.
T Consensus 218 ~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~ 297 (367)
T 2fst_X 218 CIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 297 (367)
T ss_dssp HHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCC
Confidence 99999999 67665443222221110 000 00 011223445699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccchH
Q 004998 347 PEPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
+||.+|||+.|+|+||||.....+..
T Consensus 298 ~dP~~R~t~~e~L~hp~~~~~~~~~~ 323 (367)
T 2fst_X 298 LDSDKRITAAQALAHAYFAQYHDPDD 323 (367)
T ss_dssp SSGGGSCCHHHHHTSGGGTTTCCGGG
T ss_pred CCcccCcCHHHHhcChhhhhccCCCC
Confidence 99999999999999999998765443
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-35 Score=315.84 Aligned_cols=213 Identities=18% Similarity=0.269 Sum_probs=162.2
Q ss_pred eeehhhhcccCCC--CCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDH--LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~H--pnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.++.| |||+++++ ++..+. .+|+|||+.+++|.+++.... .+++.+++.|+.||+.||.|||++|
T Consensus 54 ~~~E~~~l~~l~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ 128 (343)
T 3dbq_A 54 YRNEIAYLNKLQQHSDKIIRLYD-YEITDQ---YIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHG 128 (343)
T ss_dssp HHHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHHSC-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhhhcCCceEEEee-eEeeCC---EEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3467888988877 99999999 555443 689999999999999996543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++ ++.+||+|||++.........
T Consensus 129 iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~-------------------------------------------- 163 (343)
T 3dbq_A 129 IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS-------------------------------------------- 163 (343)
T ss_dssp CCCCCCCGGGEEEE-TTEEEECCCSSSCCC--------------------------------------------------
T ss_pred eecCCCCcceEEEE-CCcEEEeecccccccCccccc--------------------------------------------
Confidence 99999999999996 688999999888443211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----------CCCCc
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----------APVSC 290 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----------~~~s~ 290 (720)
......+||+.|+|||++.+ ..++.
T Consensus 164 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~ 199 (343)
T 3dbq_A 164 --------------------------------------------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISP 199 (343)
T ss_dssp --------------------------------------------------CCCCSSCCHHHHHHCC-----------CCH
T ss_pred --------------------------------------------ccCCCCcCCcCcCCHHHHhhccccccccccccCCCc
Confidence 00011478999999999864 55899
Q ss_pred cccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 291 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
++|||||||++|||++ ||............+........++...+ ...+|+.+||++||.+|||+.|+|+||||+.
T Consensus 200 ~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~ 279 (343)
T 3dbq_A 200 KSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 279 (343)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred hhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence 9999999999999999 67654443333434433333333333444 4559999999999999999999999999987
Q ss_pred Cccc
Q 004998 367 PRDS 370 (720)
Q Consensus 367 ~~~~ 370 (720)
...+
T Consensus 280 ~~~~ 283 (343)
T 3dbq_A 280 QTHP 283 (343)
T ss_dssp CCC-
T ss_pred cCCc
Confidence 6443
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=313.47 Aligned_cols=206 Identities=18% Similarity=0.279 Sum_probs=161.1
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.++ +|||||++++ ++.+.. .+|+|||| .|++|.+++.+.. .+++..++.++.||+.||.|||++||
T Consensus 57 ~~E~~~l~~~~~hp~iv~l~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH~~~i 131 (345)
T 3a8x_A 57 QTEKHVFEQASNHPFLVGLHS-CFQTES---RLFFVIEYVNGGDLMFHMQRQR-KLPEEHARFYSAEISLALNYLHERGI 131 (345)
T ss_dssp HHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCccCeEEE-EEEeCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 3667778776 8999999999 555543 68999999 8999999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++++||+|||+++...... +
T Consensus 132 vHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~---------------------------------~------------- 165 (345)
T 3a8x_A 132 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------------------------D------------- 165 (345)
T ss_dssp BCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT---------------------------------C-------------
T ss_pred eecCCCHHHEEECCCCCEEEEeccccccccCCC---------------------------------C-------------
Confidence 999999999999999999999988874311100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+||+.|+|||++.+..++.++|||||||++|
T Consensus 166 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ 201 (345)
T 3a8x_A 166 --------------------------------------------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMF 201 (345)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCCccccCccccCCCCCChHHhHHHHHHHHH
Confidence 001147899999999999989999999999999999
Q ss_pred hccc---cCCCC--------chHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCCh------HHHHcCccc
Q 004998 303 ELFC---PFSTG--------EEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKM------GELLQSEFL 364 (720)
Q Consensus 303 eLlt---pf~~~--------~~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rpta------~eiL~hp~~ 364 (720)
||++ ||... .........+....+. ++.. .+...+||.+||+.||.+||++ .|+++||||
T Consensus 202 ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f 279 (345)
T 3a8x_A 202 EMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR--IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 279 (345)
T ss_dssp HHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGG
T ss_pred HHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC--CCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCcc
Confidence 9999 66431 1122233333332211 2222 3445699999999999999986 799999999
Q ss_pred CCC
Q 004998 365 NEP 367 (720)
Q Consensus 365 ~~~ 367 (720)
+..
T Consensus 280 ~~~ 282 (345)
T 3a8x_A 280 RNV 282 (345)
T ss_dssp TTC
T ss_pred CCC
Confidence 875
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-35 Score=324.00 Aligned_cols=207 Identities=21% Similarity=0.307 Sum_probs=161.6
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..+|..++||||+++++ ++.+.. .+|+|||| .|++|.++|.+.+..+++..++.|+.||+.||.|||++||||
T Consensus 110 ~E~~il~~~~hp~Iv~l~~-~~~~~~---~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiH 185 (412)
T 2vd5_A 110 EERDVLVNGDRRWITQLHF-AFQDEN---YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVH 185 (412)
T ss_dssp HHHHHHHHSCTTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHhcCCCCeeeEEE-EEeeCC---EEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 5666888999999999999 665553 68999999 799999999665556999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++++||+|||++........
T Consensus 186 rDLKp~NILld~~g~vkL~DFGla~~~~~~~~------------------------------------------------ 217 (412)
T 2vd5_A 186 RDIKPDNILLDRCGHIRLADFGSCLKLRADGT------------------------------------------------ 217 (412)
T ss_dssp CCCSGGGEEECTTSCEEECCCTTCEECCTTSC------------------------------------------------
T ss_pred cccCHHHeeecCCCCEEEeechhheeccCCCc------------------------------------------------
Confidence 99999999999999999999988743211100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-------CCCCCccccchhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-------GAPVSCASDIYRL 297 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-------~~~~s~~sDIwSL 297 (720)
......+||+.|+|||++. +..|+.++|||||
T Consensus 218 -----------------------------------------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSl 256 (412)
T 2vd5_A 218 -----------------------------------------VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWAL 256 (412)
T ss_dssp -----------------------------------------EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHH
T ss_pred -----------------------------------------cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHH
Confidence 0001147899999999997 3458999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhc---CCCCccccccCc-hHHHHHHHcCCCCCCCC---CChHHHHcCcccCCC
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRH---RVLPPQLLLKFP-KEASFCLWLLHPEPSGR---PKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~---~~~p~~~~~~~p-~~~~li~~~L~~dP~~R---pta~eiL~hp~~~~~ 367 (720)
||++|||++ ||...... ..+..+.+ ....|.....++ ...+||.+||. +|.+| |+++||++||||+..
T Consensus 257 GvilyelltG~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i 334 (412)
T 2vd5_A 257 GVFAYEMFYGQTPFYADSTA-ETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGL 334 (412)
T ss_dssp HHHHHHHHHSSCTTCCSSHH-HHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTC
T ss_pred hHHHHHHHhCCCCCCCCCHH-HHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCC
Confidence 999999999 77665544 33333322 111222223344 44599999999 99998 599999999999976
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=308.05 Aligned_cols=213 Identities=15% Similarity=0.179 Sum_probs=162.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|.+++||||+++++ ++.... .+++||||.+++|.+++...+..+++..++.++.||+.||.|||++||
T Consensus 46 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i 121 (324)
T 3mtl_A 46 TAIREVSLLKDLKHANIVTLHD-IIHTEK---SLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKV 121 (324)
T ss_dssp CCCCCHHHHSCCCCTTBCCEEE-EEECSS---CEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred hHHHHHHHHHhcCCCCCCeeee-EEeeCC---EEEEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 3346888999999999999999 555443 579999997789999997666679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.+...+....
T Consensus 122 vH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~---------------------------------------------- 155 (324)
T 3mtl_A 122 LHRDLKPQNLLINERGELKLADFGLARAKSIPTK---------------------------------------------- 155 (324)
T ss_dssp EESSCCGGGEEECTTCCEEECSSSEEECC---------------------------------------------------
T ss_pred cCCCcCHHHEEECCCCCEEEccCcccccccCCcc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll 301 (720)
......||++|+|||++.+ ..++.++|||||||++
T Consensus 156 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 191 (324)
T 3mtl_A 156 --------------------------------------------TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIF 191 (324)
T ss_dssp ---------------------------------------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHH
Confidence 0011367999999999987 4589999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhh--cCCCCccc--------------------------cccCchHHHHHHHcCCCCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLR--HRVLPPQL--------------------------LLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~--~~~~p~~~--------------------------~~~~p~~~~li~~~L~~dP~ 350 (720)
|||++ ||.............. ....+..+ ....+...+||.+||++||.
T Consensus 192 ~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 271 (324)
T 3mtl_A 192 YEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGR 271 (324)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGG
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcc
Confidence 99999 7766544332222211 11111100 01223445999999999999
Q ss_pred CCCChHHHHcCcccCCCcc
Q 004998 351 GRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||+.|+|+||||.....
T Consensus 272 ~R~t~~e~l~hp~f~~~~~ 290 (324)
T 3mtl_A 272 NRISAEDAMKHPFFLSLGE 290 (324)
T ss_dssp GSCCHHHHTTSGGGGGGCS
T ss_pred cCCCHHHHhcChhhhhccc
Confidence 9999999999999998744
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=310.77 Aligned_cols=209 Identities=17% Similarity=0.206 Sum_probs=157.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..+|.+++||||+++++ ++.... .+|+||||.+++|.+++.... .+++..++.|+.||+.||.|||++||+
T Consensus 80 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH~~~iv 154 (329)
T 3gbz_A 80 AIREVSLLKELQHRNIIELKS-VIHHNH---RLHLIFEYAENDLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCHSRRCL 154 (329)
T ss_dssp CHHHHHHGGGCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcCCCCcceEEE-EEecCC---EEEEEEecCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEE
Confidence 347888999999999999999 555443 689999997679999996544 499999999999999999999999999
Q ss_pred eccCCCCcEEEc-----cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 144 VHNVRPSCFVMS-----SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 144 HrDLKP~NILl~-----~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
||||||+|||++ ..+.+||+|||++...+....
T Consensus 155 H~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~------------------------------------------ 192 (329)
T 3gbz_A 155 HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR------------------------------------------ 192 (329)
T ss_dssp CSCCCGGGEEEEC-----CCEEEECCTTHHHHHC----------------------------------------------
T ss_pred CCCCCHHHEEEecCCCCccceEEECcCCCccccCCccc------------------------------------------
Confidence 999999999995 445599998888743211100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSL 297 (720)
......||+.|+|||++.+.. ++.++|||||
T Consensus 193 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 224 (329)
T 3gbz_A 193 ------------------------------------------------QFTHEIITLWYRPPEILLGSRHYSTSVDIWSI 224 (329)
T ss_dssp -------------------------------------------------------CCTTCCHHHHTTCCCCCTHHHHHHH
T ss_pred ------------------------------------------------ccCCCcCCccccCHHHhcCCCCCCcHHHHHHH
Confidence 001146799999999998755 8999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCcc---------------------------ccc-cCchHHHHHHHcCC
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---------------------------LLL-KFPKEASFCLWLLH 346 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---------------------------~~~-~~p~~~~li~~~L~ 346 (720)
||++|||++ ||............+.....|+. +.. ..+...+||.+||+
T Consensus 225 G~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 304 (329)
T 3gbz_A 225 ACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLE 304 (329)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHcc
Confidence 999999999 67666554333333222111110 000 12344599999999
Q ss_pred CCCCCCCChHHHHcCcccCCC
Q 004998 347 PEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+||.+|||+.|+|+||||+..
T Consensus 305 ~dP~~R~t~~e~l~hp~f~~~ 325 (329)
T 3gbz_A 305 MDPVKRISAKNALEHPYFSHN 325 (329)
T ss_dssp SSGGGSCCHHHHHTSGGGSSS
T ss_pred CChhhCCCHHHHhCCcccCCC
Confidence 999999999999999999975
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-34 Score=316.38 Aligned_cols=208 Identities=18% Similarity=0.215 Sum_probs=165.6
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|.+++|||||++++ ++.... .+|+|||| .|++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 134 ~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iv 209 (373)
T 2x4f_A 134 KNEISVMNQLDHANLIQLYD-AFESKN---DIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYIL 209 (373)
T ss_dssp HHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEEECC---EEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 37888999999999999999 555543 57999999 88999999965555699999999999999999999999999
Q ss_pred eccCCCCcEEE--ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 144 VHNVRPSCFVM--SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 144 HrDLKP~NILl--~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||+|||+ +.++.+||+|||++.......
T Consensus 210 H~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~---------------------------------------------- 243 (373)
T 2x4f_A 210 HLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---------------------------------------------- 243 (373)
T ss_dssp CCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC----------------------------------------------
T ss_pred cccCCHHHEEEecCCCCcEEEEeCCCceecCCcc----------------------------------------------
Confidence 99999999999 466789999988874321110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+||+.|+|||++.+..++.++|||||||++
T Consensus 244 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 278 (373)
T 2x4f_A 244 ---------------------------------------------KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIA 278 (373)
T ss_dssp ---------------------------------------------BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHH
Confidence 00113689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcC-CCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHR-VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~-~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++ ||............+... .+++.....+ +...+||.+||.+||.+|||+.|+|+||||...
T Consensus 279 ~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 279 YMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp HHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 99999 776655543333333222 2233333333 445599999999999999999999999999875
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-34 Score=307.70 Aligned_cols=203 Identities=24% Similarity=0.326 Sum_probs=161.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCC-CHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDV-SLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~gg-sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++ ++.+.. .+++|||| .++ +|.+++.... .+++..++.|+.||+.||.|||++
T Consensus 75 ~~~~E~~~l~~l~h~~Iv~~~~-~~~~~~---~~~lv~e~~~~g~~l~~~~~~~~-~l~~~~~~~i~~qi~~~L~~LH~~ 149 (335)
T 3dls_A 75 KVTLEIAILSRVEHANIIKVLD-IFENQG---FFQLVMEKHGSGLDLFAFIDRHP-RLDEPLASYIFRQLVSAVGYLRLK 149 (335)
T ss_dssp EEEHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCTTSCBHHHHHHTCC-CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEeeCC---EEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 4557888999999999999999 555543 67999998 444 9999996554 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++.......
T Consensus 150 ~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~--------------------------------------------- 184 (335)
T 3dls_A 150 DIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK--------------------------------------------- 184 (335)
T ss_dssp TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTC---------------------------------------------
T ss_pred CeEEeccCHHHEEEcCCCcEEEeecccceECCCCC---------------------------------------------
Confidence 99999999999999999999999998874321110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..+ +.++|||||||
T Consensus 185 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~ 218 (335)
T 3dls_A 185 ----------------------------------------------LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGV 218 (335)
T ss_dssp ----------------------------------------------CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHH
T ss_pred ----------------------------------------------ceeccCCCccccChhhhcCCCCCCCcccchhHHH
Confidence 0011468999999999998876 88999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
++|||++ ||...... +.....++. ...+...+||.+||++||.+|||+.++|+||||+....
T Consensus 219 il~el~~g~~pf~~~~~~------~~~~~~~~~--~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~ 283 (335)
T 3dls_A 219 TLYTLVFEENPFCELEET------VEAAIHPPY--LVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPVN 283 (335)
T ss_dssp HHHHHHHSSCSCSSGGGG------TTTCCCCSS--CCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCCC
T ss_pred HHHHHHhCCCchhhHHHH------HhhccCCCc--ccCHHHHHHHHHHccCChhhCcCHHHHhcCccccCCcc
Confidence 9999999 55442211 111111211 12344569999999999999999999999999988643
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-34 Score=304.56 Aligned_cols=208 Identities=18% Similarity=0.258 Sum_probs=166.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ ++.+.. .+|+|||| .|++|.+++... ..+++..++.++.||+.||.|||++||
T Consensus 62 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~i 136 (321)
T 2a2a_A 62 IEREVSILRQVLHHNVITLHD-VYENRT---DVVLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLHTKKI 136 (321)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCcceEEE-EEecCC---EEEEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 347888999999999999999 555443 68999999 799999999654 359999999999999999999999999
Q ss_pred eeccCCCCcEEEccCC----ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 143 VVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 143 vHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||||||+||+++.++ .++|+|||.+.......
T Consensus 137 vH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------- 173 (321)
T 2a2a_A 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV------------------------------------------- 173 (321)
T ss_dssp ECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC-------------------------------------------
T ss_pred ecCCCChHHEEEecCCCCcCCEEEccCccceecCccc-------------------------------------------
Confidence 9999999999999887 79999888874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 174 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 205 (321)
T 2a2a_A 174 ------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 205 (321)
T ss_dssp ------------------------------------------------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred ------------------------------------------------cccccCCCCCccCcccccCCCCCCccccHHHH
Confidence 00113689999999999998899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcC--CCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~--~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|++|+|++ ||...... .....+... .+++......+. ..+||.+||++||.+|||+.|+|+||||....
T Consensus 206 ~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~ 280 (321)
T 2a2a_A 206 VITYILLSGASPFLGDTKQ-ETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD 280 (321)
T ss_dssp HHHHHHHHSCCSSCCSSHH-HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred HHHHHHHHCCCCCCCCCHH-HHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCC
Confidence 99999999 77665443 333334332 233333344444 45999999999999999999999999998763
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=307.05 Aligned_cols=212 Identities=16% Similarity=0.179 Sum_probs=162.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-----CCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-----KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-----~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
..+|..+|.+++||||+++++ ++..+. .+|+||||.+++|.+++... ...+++..++.++.||+.||.|||
T Consensus 50 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH 125 (317)
T 2pmi_A 50 AIREISLMKELKHENIVRLYD-VIHTEN---KLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH 125 (317)
T ss_dssp HHHHHHHHTTCCBTTBCCEEE-EECCTT---EEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcceEEE-EEEECC---eEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 346888999999999999999 555443 68999999667999999432 235899999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+|||++.++.+||+|||++...+....
T Consensus 126 ~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------ 163 (317)
T 2pmi_A 126 ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN------------------------------------------ 163 (317)
T ss_dssp HTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC------------------------------------------
T ss_pred HCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc------------------------------------------
Confidence 99999999999999999999999999998744321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSL 297 (720)
......||+.|+|||++.+. .++.++|||||
T Consensus 164 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diwsl 195 (317)
T 2pmi_A 164 ------------------------------------------------TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSC 195 (317)
T ss_dssp ------------------------------------------------CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHH
T ss_pred ------------------------------------------------cCCCCcccccccCchHhhCCCCCCcHHHHHHH
Confidence 00113689999999999874 58999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhc-CCCCc------------------------------ccc-ccCchHHHHHH
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPP------------------------------QLL-LKFPKEASFCL 342 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~------------------------------~~~-~~~p~~~~li~ 342 (720)
||++|||++ ||............... +..++ ... ...+...+||.
T Consensus 196 G~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 275 (317)
T 2pmi_A 196 GCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLH 275 (317)
T ss_dssp HHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHH
Confidence 999999999 67665443222221110 00000 000 11234459999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 343 WLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+||++||.+|||+.|+|+||||++...
T Consensus 276 ~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 302 (317)
T 2pmi_A 276 GLLQLNPDMRLSAKQALHHPWFAEYYH 302 (317)
T ss_dssp HHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred HHCCCCcccCCCHHHHhCChhhhcccc
Confidence 999999999999999999999998744
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=321.54 Aligned_cols=207 Identities=17% Similarity=0.252 Sum_probs=161.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-c
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-Q 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~ 140 (720)
+..+|..+|..++||||+++++ ++.... .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||+ +
T Consensus 194 ~~~~e~~~l~~l~h~~iv~l~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ 268 (446)
T 4ejn_A 194 HTLTENRVLQNSRHPFLTALKY-SFQTHD---RLCFVMEYANGGELFFHLSRER-VFSEDRARFYGAEIVSALDYLHSEK 268 (446)
T ss_dssp -------CCCCCSCTTSCCEEE-EEEETT---EEEEEECCCSSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCeEeeEEE-EEeeCC---EEEEEEeeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHhhcC
Confidence 3446778999999999999999 555443 57999999 8999999995543 49999999999999999999998 9
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|||||||||+||||+.++.+||+|||++........
T Consensus 269 giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-------------------------------------------- 304 (446)
T 4ejn_A 269 NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA-------------------------------------------- 304 (446)
T ss_dssp CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----------------------------------------------
T ss_pred CEEECCCCHHHEEECCCCCEEEccCCCceeccCCCc--------------------------------------------
Confidence 999999999999999999999999988743211100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+..++.++|||||||+
T Consensus 305 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 338 (446)
T 4ejn_A 305 ----------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV 338 (446)
T ss_dssp ------------------------------------------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCccccCHhhcCCCCCCCccchhhhHHH
Confidence 0011478999999999999999999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... .....+....++ ++. ..+...+||.+||++||.+|| ++.|+|+||||...
T Consensus 339 l~ell~g~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~ 411 (446)
T 4ejn_A 339 MYEMMCGRLPFYNQDHE-KLFELILMEEIR--FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI 411 (446)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHhhCCCCCCCCCHH-HHHHHHHhCCCC--CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence 999999 77665544 333333322221 112 234556999999999999999 99999999999986
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-34 Score=301.67 Aligned_cols=227 Identities=22% Similarity=0.306 Sum_probs=167.3
Q ss_pred eehhhhcccCCCCCceecccceeecC---------CCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENE---------AAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIV 134 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~---------~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL 134 (720)
.+|..++.+++||||+++++.+.... .....+|+|||| .|++|.+++......+++..++.++.||+.||
T Consensus 50 ~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l 129 (303)
T 1zy4_A 50 LSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEAL 129 (303)
T ss_dssp HHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHH
Confidence 36888999999999999999443321 123468999999 78999999976555689999999999999999
Q ss_pred HHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 135 YAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 135 ~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
.|||++||+||||||+|||++.++.+||+|||.+......... ..+.
T Consensus 130 ~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~------------------------------~~~~--- 176 (303)
T 1zy4_A 130 SYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDI------------------------------LKLD--- 176 (303)
T ss_dssp HHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC-----------------------------------------
T ss_pred HHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccch------------------------------hccc---
Confidence 9999999999999999999999999999999988543221000 0000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCcccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASD 293 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sD 293 (720)
. . .. ...........||+.|+|||++.+. .++.++|
T Consensus 177 --~-------~--------------------~~--------------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 213 (303)
T 1zy4_A 177 --S-------Q--------------------NL--------------PGSSDNLTSAIGTAMYVATEVLDGTGHYNEKID 213 (303)
T ss_dssp ------------------------------------------------------------CTTSCHHHHTSCSCCCTHHH
T ss_pred --c-------c--------------------cc--------------cccccccccCCCcccccCcccccCCCCCcchhh
Confidence 0 0 00 0000001124789999999999865 5899999
Q ss_pred chhhhhhhhhccccCCCCchHHHHHHHhhcC--CCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 294 IYRLGVLLFELFCPFSTGEEKTRTMSSLRHR--VLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 294 IwSLGvll~eLltpf~~~~~~~~~~~~l~~~--~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||||++|||++||............+... .+|+.+....+. ..+|+.+||++||.+|||+.++++||||...
T Consensus 214 i~slG~il~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 214 MYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp HHHHHHHHHHHHSCCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred HHHHHHHHHHHHhccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 9999999999999988765554555555432 344444444444 4599999999999999999999999999875
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-34 Score=301.02 Aligned_cols=208 Identities=17% Similarity=0.224 Sum_probs=159.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..+|.+++||||+++++ ++.+.. .+|+|||| .+++|.+++.. ....+++..++.++.||+.||.|||
T Consensus 66 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH 141 (285)
T 3is5_A 66 QIEAEIEVLKSLDHPNIIKIFE-VFEDYH---NMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141 (285)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCchHHhHHH-heecCC---eEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 3447888999999999999999 555443 57999999 88999999832 2355999999999999999999999
Q ss_pred HcCceeccCCCCcEEEc---cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 139 SQGIVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
++||+||||||+||+++ .++.+||+|||.+.......
T Consensus 142 ~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------- 181 (285)
T 3is5_A 142 SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE---------------------------------------- 181 (285)
T ss_dssp HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC---------------------------------------------
T ss_pred hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc----------------------------------------
Confidence 99999999999999994 56789999888874321110
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccch
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
......||+.|+|||++.+ .++.++|||
T Consensus 182 ---------------------------------------------------~~~~~~~t~~y~aPE~~~~-~~~~~~Di~ 209 (285)
T 3is5_A 182 ---------------------------------------------------HSTNAAGTALYMAPEVFKR-DVTFKCDIW 209 (285)
T ss_dssp --------------------------------------------------------CTTGGGCCHHHHTT-CCCHHHHHH
T ss_pred ---------------------------------------------------cCcCcccccCcCChHHhcc-CCCcccCee
Confidence 0011468999999999864 589999999
Q ss_pred hhhhhhhhccc---cCCCCchHHHHHHHhh-cCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 296 RLGVLLFELFC---PFSTGEEKTRTMSSLR-HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~-~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
||||++|||++ ||.............. ....+.......+...+|+.+||++||.+|||+.|+|+||||++
T Consensus 210 slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~ 284 (285)
T 3is5_A 210 SAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ 284 (285)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred hHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence 99999999999 7766544322222221 12222222233455669999999999999999999999999985
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-34 Score=318.78 Aligned_cols=212 Identities=18% Similarity=0.265 Sum_probs=161.2
Q ss_pred eeehhhhcccCC--CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~--HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.++. |||||++++ ++.... .+|+|||+.+++|.+++.... .+++.+++.|+.||+.||.|||++|
T Consensus 101 ~~~Ei~~l~~l~~~~~~iv~~~~-~~~~~~---~~~lv~E~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~ 175 (390)
T 2zmd_A 101 YRNEIAYLNKLQQHSDKIIRLYD-YEITDQ---YIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQHG 175 (390)
T ss_dssp HHHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEEECCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHcccCCCeEEEEEE-EEecCC---EEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 347778888886 599999999 554443 589999999999999996544 5899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++ ++.+||+|||++.........
T Consensus 176 ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~-------------------------------------------- 210 (390)
T 2zmd_A 176 IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS-------------------------------------------- 210 (390)
T ss_dssp CCCCCCCGGGEEES-SSCEEECCCSSSCCC--------------------------------------------------
T ss_pred eeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc--------------------------------------------
Confidence 99999999999995 689999999887443211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----------CCCCc
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----------APVSC 290 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----------~~~s~ 290 (720)
......+||+.|+|||++.+ ..++.
T Consensus 211 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~ 246 (390)
T 2zmd_A 211 --------------------------------------------VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISP 246 (390)
T ss_dssp -----------------------------------------------CCSCCCGGGCCHHHHHCC------------CCH
T ss_pred --------------------------------------------ccCCCCCcCCCccChHHhhhccccccccccccCCCC
Confidence 00011478999999999975 35899
Q ss_pred cccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 291 ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
++|||||||+||||++ ||.........+..+........++...+ ...+||.+||..||.+|||+.|+|+||||..
T Consensus 247 ~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~ 326 (390)
T 2zmd_A 247 KSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI 326 (390)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred hhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccc
Confidence 9999999999999999 67654443333444443333333333333 4559999999999999999999999999987
Q ss_pred Ccc
Q 004998 367 PRD 369 (720)
Q Consensus 367 ~~~ 369 (720)
...
T Consensus 327 ~~~ 329 (390)
T 2zmd_A 327 QTH 329 (390)
T ss_dssp CC-
T ss_pred cCc
Confidence 643
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=312.88 Aligned_cols=207 Identities=15% Similarity=0.171 Sum_probs=154.3
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++|||||++++ ++.+.. .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++||+
T Consensus 64 ~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH~~~iv 138 (361)
T 3uc3_A 64 QREIINHRSLRHPNIVRFKE-VILTPT---HLAIIMEYASGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCHSMQIC 138 (361)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCCCcEEE-EEeeCC---EEEEEEEeCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 37788899999999999999 555443 58999999 7999999995543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCc--eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 144 VHNVRPSCFVMSSFNH--VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 144 HrDLKP~NILl~~~~~--vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||+|||++.++. +||+|||++.......
T Consensus 139 H~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------------------- 172 (361)
T 3uc3_A 139 HRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS---------------------------------------------- 172 (361)
T ss_dssp SCCCCGGGEEECSSSSCCEEECCCCCC-----------------------------------------------------
T ss_pred cCCCCHHHEEEcCCCCceEEEeecCccccccccC----------------------------------------------
Confidence 9999999999987665 9999888773210000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcc-ccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA-SDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~-sDIwSLGvl 300 (720)
.....+||++|+|||++.+..++.+ +|||||||+
T Consensus 173 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i 207 (361)
T 3uc3_A 173 ---------------------------------------------QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVT 207 (361)
T ss_dssp -----------------------------------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHH
Confidence 0011468999999999988887554 999999999
Q ss_pred hhhccc---cCCCCch---HHHHHHHhhcCCC-CccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEE---KTRTMSSLRHRVL-PPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~---~~~~~~~l~~~~~-p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|+|++ ||..... ....+..+..... .+......+...+||.+||++||.+|||+.|+++||||...
T Consensus 208 l~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~ 281 (361)
T 3uc3_A 208 LYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTHSWFLKN 281 (361)
T ss_dssp HHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTT
T ss_pred HHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcC
Confidence 999999 6654322 2223333332222 22222234555699999999999999999999999999765
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-34 Score=320.70 Aligned_cols=241 Identities=15% Similarity=0.176 Sum_probs=162.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++ ++... .....+|+||||.+++|.+++... ..+++..++.+++||+.||.|||++
T Consensus 71 ~~~~E~~~l~~l~h~nIv~l~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~ 148 (432)
T 3n9x_A 71 RILREITILNRLKSDYIIRLYD-LIIPDDLLKFDELYIVLEIADSDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIHES 148 (432)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-ECCCSCTTTCCCEEEEEECCSEEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCcceEEE-EEecCCCCcCCeEEEEEecCCcCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4558889999999999999999 44333 122468999999778999999654 3499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||+++........... .++.-...
T Consensus 149 givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~---------------------------~~~~~~~~----- 196 (432)
T 3n9x_A 149 GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIV---------------------------NDLEENEE----- 196 (432)
T ss_dssp TEECCCCCGGGEEECTTCCEEECCCTTCEEC-------------------------------------------------
T ss_pred CCCCCCCCHHHeEECCCCCEEEccCCCccccccccccccc---------------------------cccccccc-----
Confidence 9999999999999999999999999998654322110000 00000000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccc-cCCCCCccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL-AGAPVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l-~~~~~s~~sDIwSLGv 299 (720)
. ...........+..+||++|+|||++ .+..|+.++|||||||
T Consensus 197 -~-----------------------------------~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~ 240 (432)
T 3n9x_A 197 -P-----------------------------------GPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGC 240 (432)
T ss_dssp --------------------------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHH
T ss_pred -c-----------------------------------cccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHH
Confidence 0 00000000011236899999999986 4555999999999999
Q ss_pred hhhhccc-------------c-CCCCch----------------HHHHH------------------------HHhhcC-
Q 004998 300 LLFELFC-------------P-FSTGEE----------------KTRTM------------------------SSLRHR- 324 (720)
Q Consensus 300 ll~eLlt-------------p-f~~~~~----------------~~~~~------------------------~~l~~~- 324 (720)
++|||++ | |.+... ....+ ..+...
T Consensus 241 il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~ 320 (432)
T 3n9x_A 241 IFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFP 320 (432)
T ss_dssp HHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSC
T ss_pred HHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCC
Confidence 9999995 2 211110 00000 000000
Q ss_pred -CCCc----cccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccchHH
Q 004998 325 -VLPP----QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEE 373 (720)
Q Consensus 325 -~~p~----~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l~e 373 (720)
..+. .+....+...+||.+||++||.+|||++|+|+||||+.......+
T Consensus 321 ~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~~e 374 (432)
T 3n9x_A 321 HRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLE 374 (432)
T ss_dssp CCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCCTTTC
T ss_pred CCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccCcccC
Confidence 0000 012233455699999999999999999999999999998654433
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-34 Score=321.39 Aligned_cols=206 Identities=18% Similarity=0.214 Sum_probs=163.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++.+++.++.||+.||.|||++||
T Consensus 68 ~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~i 142 (486)
T 3mwu_A 68 ILREVELLKKLDHPNIMKLFE-ILEDSS---SFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHNI 142 (486)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCcCeEEE-EEEcCC---EEEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 347888999999999999999 565543 68999999 8999999995443 49999999999999999999999999
Q ss_pred eeccCCCCcEEEc---cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 143 VVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||||||+|||++ .++.+||+|||++.......
T Consensus 143 vH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-------------------------------------------- 178 (486)
T 3mwu_A 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-------------------------------------------- 178 (486)
T ss_dssp CCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC---------------------------------------------
T ss_pred EeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC--------------------------------------------
Confidence 9999999999995 45679999888874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+. |+.++|||||||
T Consensus 179 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~-~~~~~DiwslG~ 210 (486)
T 3mwu_A 179 -----------------------------------------------KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGV 210 (486)
T ss_dssp --------------------------------------------------CCTTGGGGCCGGGGGSC-CCHHHHHHHHHH
T ss_pred -----------------------------------------------ccCCCcCCCCCCCHHHhCCC-CCchhhHHHHHH
Confidence 00114689999999999875 999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCC---ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLP---PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p---~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|+|++ ||...... .....+..+..+ +.+....+...+||.+||++||.+|||+.++|+||||+..
T Consensus 211 il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~ 283 (486)
T 3mwu_A 211 ILYILLSGTPPFYGKNEY-DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (486)
T ss_dssp HHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHT
T ss_pred HHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccC
Confidence 9999999 67665544 344444444332 2222334455699999999999999999999999999865
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-34 Score=300.81 Aligned_cols=211 Identities=19% Similarity=0.216 Sum_probs=165.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... ..+++||| .|++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 51 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~ 125 (284)
T 3kk8_A 51 KLEREARICRKLQHPNIVRLHD-SIQEES---FHYLVFDLVTGGELFEDIVARE-FYSEADASHCIQQILESIAYCHSNG 125 (284)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCcCeEEE-EEEcCC---EEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555443 57999999 8899999985443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCc---eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+||+++.++. +||+|||.+...+...
T Consensus 126 i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------- 162 (284)
T 3kk8_A 126 IVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE------------------------------------------- 162 (284)
T ss_dssp EECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC-------------------------------------------
T ss_pred cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc-------------------------------------------
Confidence 999999999999986655 9999888873321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 163 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 194 (284)
T 3kk8_A 163 ------------------------------------------------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACG 194 (284)
T ss_dssp ------------------------------------------------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred ------------------------------------------------cccCCCCCcCCcCchhhcCCCCCcccchHHHH
Confidence 00114689999999999999899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCC--CCccc-cccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQL-LLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~-~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|++|+|++ ||...... .....+.... .+... ....+...+|+.+||++||.+|||+.|+|+||||......
T Consensus 195 ~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 271 (284)
T 3kk8_A 195 VILYILLVGYPPFWDEDQH-RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERV 271 (284)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCG
T ss_pred HHHHHHHHCCCCCCCCchh-HHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCChhH
Confidence 99999999 66655443 3333333322 22222 2333455699999999999999999999999999887443
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=301.94 Aligned_cols=207 Identities=17% Similarity=0.290 Sum_probs=165.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.... ..|+|||| .|++|.+++.+. .+++..+..++.||+.||.|||++||+
T Consensus 90 ~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH~~~iv 163 (321)
T 2c30_A 90 FNEVVIMRDYQHFNVVEMYK-SYLVGE---ELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLHAQGVI 163 (321)
T ss_dssp HHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCcceEEE-EEEECC---EEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 37788999999999999999 554443 57999999 899999998543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||++........
T Consensus 164 H~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 196 (321)
T 2c30_A 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP----------------------------------------------- 196 (321)
T ss_dssp CCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-----------------------------------------------
T ss_pred cCCCCHHHEEECCCCcEEEeeeeeeeecccCcc-----------------------------------------------
Confidence 999999999999999999999988743211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 197 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~e 233 (321)
T 2c30_A 197 -------------------------------------------KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIE 233 (321)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHH
Confidence 0011468999999999999889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCc-cccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|++ ||...... ..+..+.....+. ...... +...+|+.+||+.||.+|||+.|+|+||||....
T Consensus 234 l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~ 302 (321)
T 2c30_A 234 MVDGEPPYFSDSPV-QAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQTG 302 (321)
T ss_dssp HHHSSCTTTTSCHH-HHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred HHhCCCCCCCCCHH-HHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccCC
Confidence 999 66655443 3344444433222 112223 4455999999999999999999999999998753
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=309.79 Aligned_cols=207 Identities=18% Similarity=0.244 Sum_probs=161.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++..++.++.||+.||.|||++|
T Consensus 67 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ 141 (327)
T 3a62_A 67 HTKAERNILEEVKHPFIVDLIY-AFQTGG---KLYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLHQKG 141 (327)
T ss_dssp ----HHHHHHHCCCTTBCCEEE-EEECSS---CEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCccceeE-EEEcCC---EEEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 555543 68999999 8999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++....... .
T Consensus 142 ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------------------------~------------ 176 (327)
T 3a62_A 142 IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG---------------------------------T------------ 176 (327)
T ss_dssp CCCCCCCTTTEEECTTSCEEECCCSCC-----------------------------------------------------
T ss_pred EEcccCCHHHeEECCCCcEEEEeCCcccccccCC---------------------------------c------------
Confidence 9999999999999999999999998874321100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 177 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il 211 (327)
T 3a62_A 177 ---------------------------------------------VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALM 211 (327)
T ss_dssp -----------------------------------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCcCccCHhhCcCCCCCCcccchhHHHHH
Confidence 00114689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|||++ ||....... .+..+....+ .++..+ +...+||.+||..||.+|| ++.|+++||||+..
T Consensus 212 ~el~~g~~pf~~~~~~~-~~~~i~~~~~--~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~ 283 (327)
T 3a62_A 212 YDMLTGAPPFTGENRKK-TIDKILKCKL--NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI 283 (327)
T ss_dssp HHHHHSSCSCCCSSHHH-HHHHHHHTCC--CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred HHHHHCCCCCCCCCHHH-HHHHHHhCCC--CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence 99999 776654443 3333333221 112223 4455999999999999999 88999999999876
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-34 Score=300.56 Aligned_cols=223 Identities=15% Similarity=0.137 Sum_probs=152.3
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 63 r~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
+..+|...+..+ +||||+++++ ++.+.. .+++|||| .|++|.+++... ...+++.+++.++.||+.||.||
T Consensus 56 ~~~~e~~~~~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~l 131 (289)
T 1x8b_A 56 NALREVYAHAVLGQHSHVVRYFS-AWAEDD---HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI 131 (289)
T ss_dssp HHHHHHHHHHHSCSCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCeeeeee-eeecCC---eEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH
Confidence 444677778887 9999999999 554443 68999999 789999999442 24589999999999999999999
Q ss_pred HHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|++||+||||||+|||++.++...+.+.... ..++......++++|||.+....
T Consensus 132 H~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~kl~Dfg~~~~~~ 185 (289)
T 1x8b_A 132 HSMSLVHMDIKPSNIFISRTSIPNAASEEGD--------------------------EDDWASNKVMFKIGDLGHVTRIS 185 (289)
T ss_dssp HHTTEECSCCSGGGEEEC----------------------------------------------CCCEEECCCTTCEETT
T ss_pred HhCCEeecCCCHHHEEEcCCCCCcccccccc--------------------------cccccCCceEEEEcccccccccC
Confidence 9999999999999999997664433221110 00111112234455665543211
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwS 296 (720)
.. ....||+.|+|||++.+. .+++++||||
T Consensus 186 ~~-------------------------------------------------~~~~gt~~y~aPE~~~~~~~~~~~~Di~s 216 (289)
T 1x8b_A 186 SP-------------------------------------------------QVEEGDSRFLANEVLQENYTHLPKADIFA 216 (289)
T ss_dssp CS-------------------------------------------------CCCCCCGGGCCHHHHTTCCTTHHHHHHHH
T ss_pred Cc-------------------------------------------------cccCCCccccChhHhcCCCCCCchhhHHH
Confidence 00 013579999999999876 4778999999
Q ss_pred hhhhhhhccc--cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 297 LGVLLFELFC--PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 297 LGvll~eLlt--pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||++|+|++ |+..... ....+.....+.......+...+|+.+||++||.+|||+.|+|+||||...
T Consensus 217 lG~il~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 217 LALTVVCAAGAEPLPRNGD---QWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA 286 (289)
T ss_dssp HHHHHHHHTTCCCCCSSSH---HHHHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred HHHHHHHHhcCCCCCcchh---HHHHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence 9999999999 3332222 233344444433322333455699999999999999999999999999875
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-34 Score=324.59 Aligned_cols=207 Identities=17% Similarity=0.262 Sum_probs=165.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++||||+++++ ++.... .+|+|||| .|++|.+++.+. ..+++.+++.++.||+.||.|||++|
T Consensus 62 ~~~~Ei~~l~~l~HpnIv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~g 136 (476)
T 2y94_A 62 KIRREIQNLKLFRHPHIIKLYQ-VISTPS---DIFMVMEYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCHRHM 136 (476)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555543 58999999 799999999654 34999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++...... .+
T Consensus 137 ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~----------------------------------~~----------- 171 (476)
T 2y94_A 137 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG----------------------------------EF----------- 171 (476)
T ss_dssp EECSCCSGGGEEECTTCCEEECCCSSCEECCTT----------------------------------CC-----------
T ss_pred CCcccccHHHEEEecCCCeEEEeccchhhcccc----------------------------------cc-----------
Confidence 999999999999999999999998887432110 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvl 300 (720)
....+||+.|+|||++.+..+ +.++|||||||+
T Consensus 172 ----------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvi 205 (476)
T 2y94_A 172 ----------------------------------------------LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVI 205 (476)
T ss_dssp ----------------------------------------------BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHH
T ss_pred ----------------------------------------------ccccCCCcCeEChhhccCCCCCCCcceehhhHHH
Confidence 011468999999999998875 789999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||...... .....+..+.+.. .....+...+||.+||+.||.+|||+.|+++||||+..
T Consensus 206 l~elltG~~Pf~~~~~~-~~~~~i~~~~~~~-p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~ 273 (476)
T 2y94_A 206 LYALLCGTLPFDDDHVP-TLFKKICDGIFYT-PQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQD 273 (476)
T ss_dssp HHHHHHSSCSSCCSSSH-HHHHHHHTTCCCC-CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTT
T ss_pred HHHHhhCCCCCCCCCHH-HHHHHHhcCCcCC-CccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhc
Confidence 999999 77655443 3444444443321 11223455699999999999999999999999999864
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-34 Score=314.79 Aligned_cols=216 Identities=16% Similarity=0.152 Sum_probs=154.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC--------CCCCCCHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK--------PKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~--------~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..+|.+++|||||++++ ++.... ...+|+||||.+++|.+++.. ....+++..++.|+.||+.||.
T Consensus 65 ~~~E~~~l~~l~hpniv~~~~-~~~~~~-~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~ 142 (405)
T 3rgf_A 65 ACREIALLRELKHPNVISLQK-VFLSHA-DRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH 142 (405)
T ss_dssp HHHHHHHHHHCCCTTBCCCCE-EEEETT-TTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCeeeEee-EEecCC-CCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHH
Confidence 347888999999999999999 443322 236899999977899998831 1224899999999999999999
Q ss_pred HHHHcCceeccCCCCcEEE----ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccc
Q 004998 136 AAHSQGIVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
|||++||+||||||+|||+ +.++.+||+|||++...+..... .
T Consensus 143 ~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~- 189 (405)
T 3rgf_A 143 YLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP--------------------------------L- 189 (405)
T ss_dssp HHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC------------------------------------------
T ss_pred HHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcc--------------------------------c-
Confidence 9999999999999999999 67789999999988543211000 0
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCc
Q 004998 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSC 290 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~ 290 (720)
......+||++|+|||++.+.. ++.
T Consensus 190 ------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~ 215 (405)
T 3rgf_A 190 ------------------------------------------------------ADLDPVVVTFWYRAPELLLGARHYTK 215 (405)
T ss_dssp -------------------------------------------------------------CCCTTCCHHHHTTCCSCCH
T ss_pred ------------------------------------------------------ccCCCceecCcccCchhhcCCCcccc
Confidence 0001247899999999998854 899
Q ss_pred cccchhhhhhhhhccc---cCCCCchH--------HHHHHHhhc--CCCCcccc--------------------------
Q 004998 291 ASDIYRLGVLLFELFC---PFSTGEEK--------TRTMSSLRH--RVLPPQLL-------------------------- 331 (720)
Q Consensus 291 ~sDIwSLGvll~eLlt---pf~~~~~~--------~~~~~~l~~--~~~p~~~~-------------------------- 331 (720)
++|||||||++|||++ ||...... ...+..+.. +..+...+
T Consensus 216 ~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (405)
T 3rgf_A 216 AIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSL 295 (405)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCH
T ss_pred hhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchh
Confidence 9999999999999999 66543221 011111110 00110000
Q ss_pred ---------ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 332 ---------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 332 ---------~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
...+...+||.+||++||.+|||+.|+|+||||....
T Consensus 296 ~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~ 341 (405)
T 3rgf_A 296 IKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP 341 (405)
T ss_dssp HHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred hhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence 0134456999999999999999999999999998763
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-34 Score=302.60 Aligned_cols=203 Identities=17% Similarity=0.231 Sum_probs=161.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.+.. .+++|||| .+++|.+++.... .+++..++.++.||+.||.|||++||+
T Consensus 57 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~i~ 131 (279)
T 3fdn_A 57 RREVEIQSHLRHPNILRLYG-YFHDAT---RVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSKRVI 131 (279)
T ss_dssp HHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHcCCCCCCcchhh-eEecCC---EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEe
Confidence 36778999999999999999 555543 57999999 8899999995543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+......
T Consensus 132 H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~------------------------------------------------- 162 (279)
T 3fdn_A 132 HRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------------------------------------- 162 (279)
T ss_dssp ECCCCGGGEEECTTSCEEECSCCEESCC----------------------------------------------------
T ss_pred cccCChHhEEEcCCCCEEEEeccccccCCcc-------------------------------------------------
Confidence 9999999999999999999999876322110
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++|+
T Consensus 163 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 199 (279)
T 3fdn_A 163 -------------------------------------------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 199 (279)
T ss_dssp ------------------------------------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHH
Confidence 0011467999999999999889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+.....+ ++...+ ...+||.+||++||.+|||+.|+|+||||+..
T Consensus 200 l~~g~~p~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~ 264 (279)
T 3fdn_A 200 FLVGKPPFEANTYQ-ETYKRISRVEFT--FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN 264 (279)
T ss_dssp HHHSSCTTCCSSHH-HHHHHHHHTCCC--CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHH
T ss_pred HHHCCCCCCCCcHH-HHHHHHHhCCCC--CCCcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCC
Confidence 999 66654433 333333332211 222233 44599999999999999999999999999865
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-34 Score=311.79 Aligned_cols=220 Identities=15% Similarity=0.195 Sum_probs=164.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecC-CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~-~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++.+.... .....+|+||||.+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 75 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 154 (362)
T 3pg1_A 75 RVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAG 154 (362)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCc
Confidence 3447888999999999999999444332 334468999999778999999776667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+.......
T Consensus 155 ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------- 188 (362)
T 3pg1_A 155 VVHRDLHPGNILLADNNDITICDFNLAREDTADA---------------------------------------------- 188 (362)
T ss_dssp CCCCCCCGGGEEECTTCCEEECCTTC------------------------------------------------------
T ss_pred CEecCCChHHEEEcCCCCEEEEecCccccccccc----------------------------------------------
Confidence 9999999999999999999999998874211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvl 300 (720)
......||++|+|||++.+ ..++.++|||||||+
T Consensus 189 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 223 (362)
T 3pg1_A 189 ---------------------------------------------NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCV 223 (362)
T ss_dssp ----------------------------------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHH
T ss_pred ---------------------------------------------ccceecccceecCcHHhcCCCCCCcHhHHHhHHHH
Confidence 0011468999999999987 558999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCC-------------------------CCc----c-ccccCchHHHHHHHcCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRV-------------------------LPP----Q-LLLKFPKEASFCLWLLHP 347 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~-------------------------~p~----~-~~~~~p~~~~li~~~L~~ 347 (720)
+|+|++ ||............+.... .+. . .....+...+||.+||++
T Consensus 224 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 303 (362)
T 3pg1_A 224 MAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEF 303 (362)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCS
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcC
Confidence 999999 6766543322222111000 000 0 111234456999999999
Q ss_pred CCCCCCChHHHHcCcccCCCccchHH
Q 004998 348 EPSGRPKMGELLQSEFLNEPRDSMEE 373 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~~l~e 373 (720)
||.+|||+.|+|+||||+....+...
T Consensus 304 dP~~Rpt~~ell~hp~f~~~~~~~~~ 329 (362)
T 3pg1_A 304 NPQRRISTEQALRHPYFESLFDPLDL 329 (362)
T ss_dssp SGGGSCCHHHHHTSGGGTTTCCGGGG
T ss_pred ChhhCCCHHHHHcCchhhhccCcccc
Confidence 99999999999999999988665443
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-34 Score=321.27 Aligned_cols=207 Identities=15% Similarity=0.203 Sum_probs=162.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|..++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 82 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ 156 (494)
T 3lij_A 82 KLLEEVAVLKLLDHPNIMKLYD-FFEDKR---NYYLVMECYKGGELFDEIIHRM-KFNEVDAAVIIKQVLSGVTYLHKHN 156 (494)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEEeCC---EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3347888999999999999999 665543 67999999 8999999985443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccC---CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVMSSF---NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~---~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.. +.+||+|||++.......
T Consensus 157 ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~------------------------------------------- 193 (494)
T 3lij_A 157 IVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK------------------------------------------- 193 (494)
T ss_dssp EECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB-------------------------------------------
T ss_pred ceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc-------------------------------------------
Confidence 9999999999999764 459998888773321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||++|+|||++.+ .|+.++||||||
T Consensus 194 ------------------------------------------------~~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG 224 (494)
T 3lij_A 194 ------------------------------------------------KMKERLGTAYYIAPEVLRK-KYDEKCDVWSIG 224 (494)
T ss_dssp ------------------------------------------------CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHH
T ss_pred ------------------------------------------------cccccCCCcCeeCHHHHcc-cCCCchhHHHHH
Confidence 0011468999999999875 599999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCC--Ccccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~~~-~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+..+.. +...... .+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 225 ~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~ 298 (494)
T 3lij_A 225 VILFILLAGYPPFGGQTDQ-EILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM 298 (494)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence 99999999 67665444 34444444332 2222233 3445699999999999999999999999999764
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=306.30 Aligned_cols=204 Identities=16% Similarity=0.229 Sum_probs=163.1
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..+|..+ +||||+++++ ++++.. .+|+|||| .|++|.+++.+.+ .+++..++.++.||+.||.|||++||+
T Consensus 69 ~E~~~l~~~~~hp~iv~l~~-~~~~~~---~~~lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~giv 143 (353)
T 2i0e_A 69 VEKRVLALPGKPPFLTQLHS-CFQTMD---RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGII 143 (353)
T ss_dssp HHHHHHTCTTCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHhcCCCCEEeeEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEE
Confidence 566678776 8999999999 555543 68999999 8999999996543 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.+|++||+|||++........
T Consensus 144 HrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~----------------------------------------------- 176 (353)
T 2i0e_A 144 YRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV----------------------------------------------- 176 (353)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC-----------------------------------------------
T ss_pred eccCCHHHEEEcCCCcEEEEeCCcccccccCCc-----------------------------------------------
Confidence 999999999999999999999988743211000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....+||+.|+|||++.+..++.++|||||||++||
T Consensus 177 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e 213 (353)
T 2i0e_A 177 -------------------------------------------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 213 (353)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccccCCccccChhhhcCCCcCCcccccchHHHHHH
Confidence 0011478999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|++ ||...... .....+....+. ++..+ +...+||.+||+.||.+||+ +.+|++||||+..
T Consensus 214 ll~G~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~ 283 (353)
T 2i0e_A 214 MLAGQAPFEGEDED-ELFQSIMEHNVA--YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 283 (353)
T ss_dssp HHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred HHcCCCCCCCCCHH-HHHHHHHhCCCC--CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence 999 77665444 344444433221 22233 44559999999999999994 6999999999876
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-34 Score=309.10 Aligned_cols=202 Identities=16% Similarity=0.221 Sum_probs=152.7
Q ss_pred ehhhhcccCC-----CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGD-----HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 66 ~e~~~Ls~l~-----HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+|..+|..+. |||||++++ ++.... .+|+||||.+++|.+++.. ....+++.+++.++.||+.||.|||+
T Consensus 80 ~e~~~l~~l~~~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~ 155 (360)
T 3llt_A 80 IEADILKKIQNDDINNNNIVKYHG-KFMYYD---HMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRK 155 (360)
T ss_dssp HHHHHHHHTCCCSTTGGGBCCEEE-EEEETT---EEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCCCeecccc-eeeECC---eeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 5666777665 999999999 554443 6899999999999999944 33459999999999999999999999
Q ss_pred cCceeccCCCCcEEEcc-------------------------CCceEEeccCcccCCCCCCcccccccccccccCCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSS-------------------------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPL 194 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~-------------------------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~ 194 (720)
+||+||||||+|||++. ++.+||+|||++......
T Consensus 156 ~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-------------------- 215 (360)
T 3llt_A 156 MSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-------------------- 215 (360)
T ss_dssp TTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC--------------------
T ss_pred CCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC--------------------
Confidence 99999999999999975 556666666555211000
Q ss_pred chhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccC
Q 004998 195 PLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMET 274 (720)
Q Consensus 195 ~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT 274 (720)
.....||
T Consensus 216 -------------------------------------------------------------------------~~~~~gt 222 (360)
T 3llt_A 216 -------------------------------------------------------------------------HGSIINT 222 (360)
T ss_dssp -------------------------------------------------------------------------CCSCCSC
T ss_pred -------------------------------------------------------------------------CcCccCc
Confidence 0114689
Q ss_pred CcccCCccccCCCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhc--CCCCcccc------------------
Q 004998 275 NWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQLL------------------ 331 (720)
Q Consensus 275 ~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~------------------ 331 (720)
+.|+|||++.+..++.++|||||||++|||++ ||........ ...+.. ..+|+...
T Consensus 223 ~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 301 (360)
T 3llt_A 223 RQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEH-LAMMESIIQPIPKNMLYEATKTNGSKYVNKDELK 301 (360)
T ss_dssp GGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTE
T ss_pred ccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHH-HHHHHHhcCCCCHHHHhhhhhccCccccCcccce
Confidence 99999999999999999999999999999999 7766543322 221111 11111100
Q ss_pred -------------------------ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 332 -------------------------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 332 -------------------------~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
...+...+||.+||++||.+|||+.|+|+||||+
T Consensus 302 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 302 LAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp ECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred ecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 0113344999999999999999999999999995
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-34 Score=314.46 Aligned_cols=220 Identities=15% Similarity=0.158 Sum_probs=164.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++ ++... .....+|+||||.+++|.+++... .+++.+++.|+.||+.||.|||++
T Consensus 71 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~iv~e~~~~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH~~ 147 (364)
T 3qyz_A 71 RTLREIKILLRFRHENIIGIND-IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSA 147 (364)
T ss_dssp HHHHHHHHHHHCCCTTBCCCCE-EECCSSTTTCCCEEEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCcccee-EEecCCccccceEEEEEcccCcCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 4447888999999999999999 44332 233468999999778999999653 399999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||.+....... +.
T Consensus 148 ~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~---------------------------------~~---------- 184 (364)
T 3qyz_A 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH---------------------------------DH---------- 184 (364)
T ss_dssp TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG---------------------------------CB----------
T ss_pred CeecCCCChHhEEECCCCCEEEEeCcceEecCCCC---------------------------------Cc----------
Confidence 99999999999999999999999999884321110 00
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGv 299 (720)
.......+||++|+|||++.+.. ++.++|||||||
T Consensus 185 --------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~ 220 (364)
T 3qyz_A 185 --------------------------------------------TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 220 (364)
T ss_dssp --------------------------------------------CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHH
T ss_pred --------------------------------------------cccccccccccCCCCCHHhcCCCCCCcchhHHHHHH
Confidence 00001147899999999876544 899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc-CCCC---------------------------ccc-cccCchHHHHHHHcCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRH-RVLP---------------------------PQL-LLKFPKEASFCLWLLHP 347 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~-~~~p---------------------------~~~-~~~~p~~~~li~~~L~~ 347 (720)
++|||++ ||............+.. +..+ ..+ ....+...+||.+||.+
T Consensus 221 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 300 (364)
T 3qyz_A 221 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTF 300 (364)
T ss_dssp HHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCS
T ss_pred HHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCC
Confidence 9999999 67655433222111110 0000 001 12234456999999999
Q ss_pred CCCCCCChHHHHcCcccCCCccchH
Q 004998 348 EPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
||.+|||+.|+|+||||+....+..
T Consensus 301 dP~~R~t~~e~l~hp~~~~~~~~~~ 325 (364)
T 3qyz_A 301 NPHKRIEVEQALAHPYLEQYYDPSD 325 (364)
T ss_dssp STTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred ChhhCCCHHHHhcCcchhhccCccc
Confidence 9999999999999999998755443
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-34 Score=307.02 Aligned_cols=210 Identities=13% Similarity=0.165 Sum_probs=162.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..++.+++||||+++++ ++.... .+++||||.+++|.+++......+++.+++.++.||+.||.|||++||+|
T Consensus 60 ~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH 135 (346)
T 1ua2_A 60 LREIKLLQELSHPNIIGLLD-AFGHKS---NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILH 135 (346)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECCTT---CCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHhhCCCCCCCeEEE-EEeeCC---ceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEEC
Confidence 37888999999999999999 554443 57999999667999999766667999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++...+....
T Consensus 136 ~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~------------------------------------------------ 167 (346)
T 1ua2_A 136 RDLKPNNLLLDENGVLKLADFGLAKSFGSPNR------------------------------------------------ 167 (346)
T ss_dssp CCCCGGGEEECTTCCEEECCCGGGSTTTSCCC------------------------------------------------
T ss_pred CCCCHHHEEEcCCCCEEEEecccceeccCCcc------------------------------------------------
Confidence 99999999999999999999988754321100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFE 303 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~e 303 (720)
......||++|+|||++.+.. ++.++|||||||++||
T Consensus 168 ------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e 205 (346)
T 1ua2_A 168 ------------------------------------------AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAE 205 (346)
T ss_dssp ------------------------------------------CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHH
T ss_pred ------------------------------------------cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHH
Confidence 001146899999999997654 8999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc-CCCCcc------------------------ccccC-chHHHHHHHcCCCCCCCCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRH-RVLPPQ------------------------LLLKF-PKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~-~~~p~~------------------------~~~~~-p~~~~li~~~L~~dP~~Rpt 354 (720)
|++ ||............+.. +..++. ..... +...+||.+||+.||.+|||
T Consensus 206 ll~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 285 (346)
T 1ua2_A 206 LLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT 285 (346)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC
T ss_pred HHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCC
Confidence 999 45554443322222221 111000 00122 34559999999999999999
Q ss_pred hHHHHcCcccCCCc
Q 004998 355 MGELLQSEFLNEPR 368 (720)
Q Consensus 355 a~eiL~hp~~~~~~ 368 (720)
+.|+|+||||....
T Consensus 286 ~~ell~h~~f~~~~ 299 (346)
T 1ua2_A 286 ATQALKMKYFSNRP 299 (346)
T ss_dssp HHHHHTSGGGTSSS
T ss_pred HHHHhcChhhhcCC
Confidence 99999999998753
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-34 Score=307.05 Aligned_cols=216 Identities=18% Similarity=0.289 Sum_probs=166.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++.+..........|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++|
T Consensus 58 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ 136 (311)
T 3ork_A 58 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG 136 (311)
T ss_dssp HHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999444444333356999999 7899999995443 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 137 ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------------------- 172 (311)
T 3ork_A 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS-------------------------------------------- 172 (311)
T ss_dssp CCCCCCCGGGEEEETTSCEEECCCSCC-----------------------------------------------------
T ss_pred CCcCCCCHHHEEEcCCCCEEEeeccCcccccccccc--------------------------------------------
Confidence 999999999999999999999999987433211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
........||+.|+|||++.+..++.++|||||||++
T Consensus 173 -------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l 209 (311)
T 3ork_A 173 -------------------------------------------VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 209 (311)
T ss_dssp ----------------------------------------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHH
Confidence 0000114689999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccc-cccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQL-LLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~-~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|||++ ||............+.....++.. ...++ ...+||.+||+.||.+||++.++|.|+|+..
T Consensus 210 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 210 YEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred HHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 99999 787766655555555555444432 23344 4459999999999999999999999999764
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-34 Score=317.50 Aligned_cols=208 Identities=21% Similarity=0.246 Sum_probs=157.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++..+ .+|+|||| .+++|.+++... ..+++.+++.++.||+.||.|||++|
T Consensus 186 ~~~~E~~~l~~l~hpniv~l~~-~~~~~----~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ 259 (419)
T 3i6u_A 186 NVETEIEILKKLNHPCIIKIKN-FFDAE----DYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENG 259 (419)
T ss_dssp CHHHHHHHHHHCCCTTBCCCCE-EEESS----EEEEEEECCTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEecC----ceEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 55443 47999999 899999998544 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC---ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.++ .+||+|||++...+...
T Consensus 260 ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~------------------------------------------- 296 (419)
T 3i6u_A 260 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS------------------------------------------- 296 (419)
T ss_dssp CCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC----------------------------------------------
T ss_pred ccccCCChHhEEEecCCCcceEEEeecccceecCCCc-------------------------------------------
Confidence 99999999999997544 49999888874432110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC---CCCCccccch
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIY 295 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDIw 295 (720)
.....+||+.|+|||++.+ ..++.++|||
T Consensus 297 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Diw 328 (419)
T 3i6u_A 297 ------------------------------------------------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW 328 (419)
T ss_dssp --------------------------------------------------------CTTCCTTTTC----CTTHHHHHHH
T ss_pred ------------------------------------------------cccccCCCCCccCceeeecCCCCCCCchhhhH
Confidence 0011468999999999864 4588999999
Q ss_pred hhhhhhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||++|+|++ ||............+..+. +++...... +...+||.+||++||.+|||+.|+|+||||+..
T Consensus 329 slG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~ 406 (419)
T 3i6u_A 329 SLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 406 (419)
T ss_dssp HHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred hHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence 99999999999 6655433222333333332 223333333 444599999999999999999999999999874
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=302.51 Aligned_cols=207 Identities=19% Similarity=0.217 Sum_probs=154.8
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHHc-C
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHSQ-G 141 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs~-g 141 (720)
.+...+..++||||+++++ ++.++. .+|+||||.+++|.+++.. ....+++..++.++.||+.||.|||++ |
T Consensus 55 ~~~~~~~~~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~ 130 (290)
T 3fme_A 55 DLDISMRTVDCPFTVTFYG-ALFREG---DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS 130 (290)
T ss_dssp HHHHHHTTCCCTTBCCEEE-EEECSS---SEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCeEEEEee-eeeccC---CEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC
Confidence 3444578899999999999 554443 5799999966799888732 455699999999999999999999998 9
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+.......
T Consensus 131 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------------------------- 164 (290)
T 3fme_A 131 VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV---------------------------------------------- 164 (290)
T ss_dssp CCCCCCSGGGCEECTTCCEEBCCC--------------------------------------------------------
T ss_pred eecCCCCHHHEEECCCCCEEEeecCCcccccccc----------------------------------------------
Confidence 9999999999999999999999988874321110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccc----cCCCCCccccchhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL----AGAPVSCASDIYRL 297 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l----~~~~~s~~sDIwSL 297 (720)
......||+.|+|||++ .+..++.++|||||
T Consensus 165 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~sl 199 (290)
T 3fme_A 165 ---------------------------------------------AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSL 199 (290)
T ss_dssp --------------------------------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHH
T ss_pred ---------------------------------------------cccccCCCccccChhhcChhhcCcCCCcHHHHHHH
Confidence 00013589999999996 45558999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|+|++ ||..................+......++ ...+|+.+||++||.+|||+.|+++||||+..
T Consensus 200 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~ 273 (290)
T 3fme_A 200 GITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH 273 (290)
T ss_dssp HHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence 999999999 77654443333433333333333333344 45599999999999999999999999999864
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-34 Score=313.40 Aligned_cols=213 Identities=20% Similarity=0.241 Sum_probs=158.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++..++||||+++++ ++.... ....+|+||||.+++|.+++.. .+++..+..++.||+.||.|||+
T Consensus 70 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~ 145 (371)
T 2xrw_A 70 RAYRELVLMKCVNHKNIIGLLN-VFTPQKSLEEFQDVYIVMELMDANLCQVIQM---ELDHERMSYLLYQMLCGIKHLHS 145 (371)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSCCSTTTCCEEEEEEECCSEEHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCccceEE-eeccccccccccceEEEEEcCCCCHHHHHhh---ccCHHHHHHHHHHHHHHHHHHHH
Confidence 3447888999999999999999 444332 2336899999977799999853 38999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||++...+...
T Consensus 146 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~-------------------------------------------- 181 (371)
T 2xrw_A 146 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-------------------------------------------- 181 (371)
T ss_dssp TTCCCSCCCGGGEEECTTSCEEECCCCC----------------------------------------------------
T ss_pred CCeecccCCHHHEEEcCCCCEEEEEeeccccccccc--------------------------------------------
Confidence 999999999999999999999999998874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 182 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 214 (371)
T 2xrw_A 182 -----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 214 (371)
T ss_dssp -------------------------------------------------------CTTCCHHHHTTCCCCTTHHHHHHHH
T ss_pred -----------------------------------------------ccCCceecCCccCHHHhcCCCCCchHhHHHHHH
Confidence 001146899999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCC-cccc-------------------------------c--------cCch
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQLL-------------------------------L--------KFPK 336 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~-------------------------------~--------~~p~ 336 (720)
++|||++ ||............+.....| +.+. + ..+.
T Consensus 215 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (371)
T 2xrw_A 215 IMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQ 294 (371)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHH
Confidence 9999999 777655443322222211110 0000 0 0123
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 337 ~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
..+||.+||.+||.+|||+.|+|+||||+...++
T Consensus 295 ~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~~~ 328 (371)
T 2xrw_A 295 ARDLLSKMLVIDASKRISVDEALQHPYINVWYDP 328 (371)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHHSHHHHTTCCH
T ss_pred HHHHHHHHCcCChhhCCCHHHHhCCcchhhhcCc
Confidence 4599999999999999999999999999876543
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=315.06 Aligned_cols=213 Identities=17% Similarity=0.254 Sum_probs=162.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCC---CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~---~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++..++||||+++++ ++..... ...+|+||||.+++|.+++.. .+++..++.++.||+.||.|||+
T Consensus 87 ~~~~E~~~l~~l~h~niv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~ 162 (371)
T 4exu_A 87 RAYRELLLLKHMQHENVIGLLD-VFTPASSLRNFYDFYLVMPFMQTDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIHS 162 (371)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSE-EECSCSSSTTCCCCEEEEECCCEEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCchhhhh-heeccCCcccceeEEEEEccccccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHH
Confidence 4447888999999999999999 5544332 223599999977899998833 39999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||.+...+..
T Consensus 163 ~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~--------------------------------------------- 197 (371)
T 4exu_A 163 AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--------------------------------------------- 197 (371)
T ss_dssp TTCCCSCCCGGGEEECTTCCEEECSTTCC---------------------------------------------------
T ss_pred CCCcCCCcCHHHeEECCCCCEEEEecCcccccccC---------------------------------------------
Confidence 99999999999999999999999999887432110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
.....||++|+|||++.+ ..++.++||||||
T Consensus 198 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 229 (371)
T 4exu_A 198 ------------------------------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVG 229 (371)
T ss_dssp --------------------------------------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHH
T ss_pred ------------------------------------------------cCCcccCccccCHHHhcCCCCCCcHHhHHHHH
Confidence 011467999999999987 5689999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCC-cc----------------------------ccccCchHHHHHHHcCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLP-PQ----------------------------LLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p-~~----------------------------~~~~~p~~~~li~~~L~ 346 (720)
|++|+|++ ||............+.....+ .. +....+...+||.+||+
T Consensus 230 ~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 309 (371)
T 4exu_A 230 CIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 309 (371)
T ss_dssp HHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCC
Confidence 99999999 776654433322222211111 00 11123455699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccchH
Q 004998 347 PEPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
+||.+|||+.|+|+||||+....+..
T Consensus 310 ~dP~~Rpt~~ell~hp~f~~~~~~~~ 335 (371)
T 4exu_A 310 LDVDKRLTAAQALTHPFFEPFRDPEE 335 (371)
T ss_dssp SCTTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred CChhhcCCHHHHhcCcccccCCCccc
Confidence 99999999999999999998755443
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-33 Score=294.29 Aligned_cols=206 Identities=18% Similarity=0.266 Sum_probs=163.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.+.. .+|+|||| .|++|.+++.... .+++.+++.++.||+.||.|||++||
T Consensus 53 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i 127 (277)
T 3f3z_A 53 FKQEIEIMKSLDHPNIIRLYE-TFEDNT---DIYLVMELCTGGELFERVVHKR-VFRESDAARIMKDVLSAVAYCHKLNV 127 (277)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEecCC---eEEEEEeccCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346788999999999999999 555443 57999999 7899999995443 49999999999999999999999999
Q ss_pred eeccCCCCcEEE---ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 143 VVHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||||||+||++ +.++.++|+|||.+.......
T Consensus 128 ~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~-------------------------------------------- 163 (277)
T 3f3z_A 128 AHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK-------------------------------------------- 163 (277)
T ss_dssp ECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS--------------------------------------------
T ss_pred cCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc--------------------------------------------
Confidence 999999999999 788899999988874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+. ++.++|||||||
T Consensus 164 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~ 195 (277)
T 3f3z_A 164 -----------------------------------------------MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGV 195 (277)
T ss_dssp -----------------------------------------------CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHH
T ss_pred -----------------------------------------------chhccCCCCCccChHHhccc-CCchhhehhHHH
Confidence 00113689999999999765 899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCC--Ccccc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~-~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||...... .....+..... +.... ...+...+|+.+||++||.+|||+.++|+||||+..
T Consensus 196 ~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~ 268 (277)
T 3f3z_A 196 MMYVLLCGYPPFSAPTDS-EVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQ 268 (277)
T ss_dssp HHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHH
T ss_pred HHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcc
Confidence 9999999 77665544 33333433322 22222 233455699999999999999999999999999764
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-34 Score=314.69 Aligned_cols=211 Identities=17% Similarity=0.215 Sum_probs=154.9
Q ss_pred ehhhhc-ccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 66 SDGVEL-THGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 66 ~e~~~L-s~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+|..++ ...+||||+++++.+.........+|+|||| .|++|.++|... ...+++.+++.|+.||+.||.|||++||
T Consensus 103 ~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i 182 (400)
T 1nxk_A 103 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 182 (400)
T ss_dssp HHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 455554 4468999999999433222223368999999 889999999654 3459999999999999999999999999
Q ss_pred eeccCCCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 143 VVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||||||+|||++. ++.+||+|||+++......
T Consensus 183 vHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~-------------------------------------------- 218 (400)
T 1nxk_A 183 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN-------------------------------------------- 218 (400)
T ss_dssp ECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------------------------------------------
T ss_pred cccCcCcceEEEecCCCCccEEEEecccccccCCCC--------------------------------------------
Confidence 99999999999997 7889999888874321100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+..|+.++|||||||
T Consensus 219 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 251 (400)
T 1nxk_A 219 -----------------------------------------------SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 251 (400)
T ss_dssp -------------------------------------------------------CTTCCGGGSCCCCSSSHHHHHHHHH
T ss_pred -----------------------------------------------ccccCCCCCCccCHhhcCCCCCCCcccHHHHHH
Confidence 001147899999999999888999999999999
Q ss_pred hhhhccc---cCCCCchHH---HHHHHhhcC--CCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 300 LLFELFC---PFSTGEEKT---RTMSSLRHR--VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~---~~~~~l~~~--~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||....... .....+..+ .++......+ +...+||.+||+.||.+|||+.|+|+||||...
T Consensus 252 il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 328 (400)
T 1nxk_A 252 IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328 (400)
T ss_dssp HHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred HHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCC
Confidence 9999999 665432210 112222222 2232222333 445599999999999999999999999999865
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=311.06 Aligned_cols=214 Identities=17% Similarity=0.179 Sum_probs=161.7
Q ss_pred eehhhhcccCCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+|..+|..++|||||++++.++.... ....+++||||.+++|.+.+. .....+++..++.++.||+.||.|||+
T Consensus 80 ~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~ 159 (394)
T 4e7w_A 80 NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS 159 (394)
T ss_dssp CHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 368889999999999999995544332 223478999996667666552 234559999999999999999999999
Q ss_pred cCceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 140 QGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||+||||||+|||++ .++.+||+|||+++......
T Consensus 160 ~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~------------------------------------------- 196 (394)
T 4e7w_A 160 IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE------------------------------------------- 196 (394)
T ss_dssp TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC-------------------------------------------
T ss_pred CCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC-------------------------------------------
Confidence 9999999999999999 78999999998874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSL 297 (720)
......||++|+|||++.+.. ++.++|||||
T Consensus 197 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSl 228 (394)
T 4e7w_A 197 ------------------------------------------------PNVSYICSRYYRAPELIFGATNYTTNIDIWST 228 (394)
T ss_dssp ------------------------------------------------CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHH
T ss_pred ------------------------------------------------CCcccccCcCccCHHHHcCCCCCCcHHHHHHH
Confidence 001146899999999997764 8999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhc------------------CCCCc--------cccc-cCchHHHHHHHcCCC
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRH------------------RVLPP--------QLLL-KFPKEASFCLWLLHP 347 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~------------------~~~p~--------~~~~-~~p~~~~li~~~L~~ 347 (720)
||++|||++ ||.+..........+.. ..+|. .+.. ..+...+||.+||++
T Consensus 229 G~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 308 (394)
T 4e7w_A 229 GCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEY 308 (394)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCS
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCC
Confidence 999999999 77766544333322221 00110 0111 223455999999999
Q ss_pred CCCCCCChHHHHcCcccCCCcc
Q 004998 348 EPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||.+|||+.|+|+||||+....
T Consensus 309 dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 309 TPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp SGGGSCCHHHHHTSGGGSTTTS
T ss_pred ChhhCCCHHHHhcChhhhhhcc
Confidence 9999999999999999998644
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-34 Score=302.14 Aligned_cols=217 Identities=16% Similarity=0.199 Sum_probs=157.9
Q ss_pred eeeehhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+ ++||||+++++ ++.+.. .+|+|||| .|++|.+++.... .+++.+++.++.||+.||.|||++
T Consensus 56 ~~~~E~~~l~~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~ 130 (316)
T 2ac3_A 56 RVFREVEMLYQCQGHRNVLELIE-FFEEED---RFYLVFEKMRGGSILSHIHKRR-HFNELEASVVVQDVASALDFLHNK 130 (316)
T ss_dssp HHHHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCCeeeEEE-EEeeCC---EEEEEEEcCCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34467778877 57999999999 555443 68999999 7899999995543 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCc---eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
||+||||||+|||++.++. +||+|||++.......... ..
T Consensus 131 ~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~------------------------------~~------- 173 (316)
T 2ac3_A 131 GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS------------------------------PI------- 173 (316)
T ss_dssp TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------------------------------------------------
T ss_pred CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccc------------------------------cc-------
Confidence 9999999999999997776 9999998874321110000 00
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----CCCCccc
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----APVSCAS 292 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~s~~s 292 (720)
.........||+.|+|||++.+ ..++.++
T Consensus 174 ----------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~ 207 (316)
T 2ac3_A 174 ----------------------------------------------STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRC 207 (316)
T ss_dssp ------------------------------------------------------CCSGGGCCHHHHHHTSHHHHHHTTTH
T ss_pred ----------------------------------------------cccccccccCCcCccChHHhhcccccccCCCccc
Confidence 0000011468999999999975 4489999
Q ss_pred cchhhhhhhhhccc---cCCCCch--------------HHHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCC
Q 004998 293 DIYRLGVLLFELFC---PFSTGEE--------------KTRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 293 DIwSLGvll~eLlt---pf~~~~~--------------~~~~~~~l~~~~--~p~~~~~~~-p~~~~li~~~L~~dP~~R 352 (720)
|||||||++|||++ ||..... .......+.... +|....... +...+||.+||++||.+|
T Consensus 208 DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 287 (316)
T 2ac3_A 208 DLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQR 287 (316)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTS
T ss_pred ccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhC
Confidence 99999999999999 6654321 122333343332 222222233 345599999999999999
Q ss_pred CChHHHHcCcccCCC
Q 004998 353 PKMGELLQSEFLNEP 367 (720)
Q Consensus 353 pta~eiL~hp~~~~~ 367 (720)
||+.|+|+||||+..
T Consensus 288 ps~~e~l~hp~~~~~ 302 (316)
T 2ac3_A 288 LSAAQVLQHPWVQGC 302 (316)
T ss_dssp CCHHHHHHSTTCC--
T ss_pred CCHHHHhcChhhcCC
Confidence 999999999999975
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-34 Score=305.27 Aligned_cols=208 Identities=19% Similarity=0.286 Sum_probs=161.8
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..+|..++..+ .||||+++++ ++.... .+|+|||| .|++|.+++.. ....+++.+++.++.||+.||.|||++
T Consensus 75 ~~~e~~~l~~l~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~ 150 (327)
T 3lm5_A 75 ILHEIAVLELAKSCPRVINLHE-VYENTS---EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN 150 (327)
T ss_dssp HHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhccCCCCEEEEEE-EEEeCC---eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 34677778777 5699999999 555443 57999999 88999999843 345699999999999999999999999
Q ss_pred CceeccCCCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 141 GIVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 141 gIvHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
||+||||||+|||++. ++.+||+|||++...+...
T Consensus 151 givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~------------------------------------------ 188 (327)
T 3lm5_A 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC------------------------------------------ 188 (327)
T ss_dssp TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC----------------------------------------------
T ss_pred CeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc------------------------------------------
Confidence 9999999999999987 7899999888874321110
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
......||+.|+|||++.+..++.++|||||
T Consensus 189 -------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl 219 (327)
T 3lm5_A 189 -------------------------------------------------ELREIMGTPEYLAPEILNYDPITTATDMWNI 219 (327)
T ss_dssp ------------------------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHH
T ss_pred -------------------------------------------------ccccccCCcCccCCeeecCCCCCchhhHHHH
Confidence 0011468999999999999999999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhc--CCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~--~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++|||++ ||......... ..+.. ...++.....++ ...+||.+||++||.+|||++++|+||||+..
T Consensus 220 G~il~~ll~g~~pf~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~ 294 (327)
T 3lm5_A 220 GIIAYMLLTHTSPFVGEDNQETY-LNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQW 294 (327)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHH-HHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCC
T ss_pred HHHHHHHHhCCCCCCCCCchHHH-HHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccc
Confidence 999999999 77665544332 22222 222333333344 44599999999999999999999999999876
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-34 Score=335.92 Aligned_cols=204 Identities=16% Similarity=0.237 Sum_probs=164.1
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.|..+|..+ +||||+++++ ++++.. .+|+|||| .|++|.++|.+.+ .+++..++.|+.||+.||.|||++|||
T Consensus 390 ~E~~~l~~~~~~~~i~~l~~-~~~~~~---~~~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~gIi 464 (674)
T 3pfq_A 390 VEKRVLALPGKPPFLTQLHS-CFQTMD---RLYFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQSKGII 464 (674)
T ss_dssp HHHHHHTCTTCCTTBCCEEE-ECBCSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTSEE
T ss_pred HHHHHHHhccCCCeEEEEEE-EEEeCC---EEEEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeE
Confidence 566677775 7999999999 555543 68999999 8999999996544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||||+.++++||+|||+++......
T Consensus 465 HrDLKp~NILl~~~g~ikL~DFGla~~~~~~~------------------------------------------------ 496 (674)
T 3pfq_A 465 YRDLKLDNVMLDSEGHIKIADFGMCKENIWDG------------------------------------------------ 496 (674)
T ss_dssp CCCCCSTTEEECSSSCEEECCCTTCEECCCTT------------------------------------------------
T ss_pred eccCChhhEEEcCCCcEEEeecceeeccccCC------------------------------------------------
Confidence 99999999999999999999998874311100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......+||+.|+|||++.+..|+.++|||||||+|||
T Consensus 497 ------------------------------------------~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilye 534 (674)
T 3pfq_A 497 ------------------------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE 534 (674)
T ss_dssp ------------------------------------------CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccccCCCcccCHhhhcCCCCCccceEechHHHHHH
Confidence 00012579999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCCh-----HHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKM-----GELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta-----~eiL~hp~~~~~ 367 (720)
|++ ||...... ..+..+....+. ++..+ +...+||.+||++||.+||++ +||++||||+..
T Consensus 535 lltG~~Pf~~~~~~-~~~~~i~~~~~~--~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i 604 (674)
T 3pfq_A 535 MLAGQAPFEGEDED-ELFQSIMEHNVA--YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI 604 (674)
T ss_dssp HHHSSCSSCCSSHH-HHHHHHHSSCCC--CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred HHcCCCCCCCCCHH-HHHHHHHhCCCC--CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence 999 77766554 444444433221 22233 445599999999999999997 999999999986
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-34 Score=328.31 Aligned_cols=206 Identities=15% Similarity=0.223 Sum_probs=164.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++...+ ..+++..++.|+.||+.||.|||++||
T Consensus 232 ~~E~~iL~~l~hp~Iv~l~~-~~~~~~---~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gI 307 (576)
T 2acx_A 232 LNEKQILEKVNSRFVVSLAY-AYETKD---ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERI 307 (576)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHcCCCCEeeEEE-EEeeCC---EEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 36778999999999999999 555543 68999999 8999999995543 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+|||++.+|++||+|||++.......
T Consensus 308 vHrDLKPeNILld~~g~vKL~DFGla~~~~~~~----------------------------------------------- 340 (576)
T 2acx_A 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----------------------------------------------- 340 (576)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred eccCCchheEEEeCCCCeEEEecccceecccCc-----------------------------------------------
Confidence 999999999999999999999998874321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+||+.|+|||++.+..|+.++|||||||++|
T Consensus 341 --------------------------------------------~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvily 376 (576)
T 2acx_A 341 --------------------------------------------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLY 376 (576)
T ss_dssp --------------------------------------------CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCCccccCHHHHcCCCCCccchHHHHHHHHH
Confidence 001147899999999999988999999999999999
Q ss_pred hccc---cCCCCc---hHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~---~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
||++ ||.... ........+... +..++..+ +...+||.+||++||.+|| ++.|+++||||+..
T Consensus 377 eLltG~~PF~~~~~~~~~~~i~~~i~~~--~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i 451 (576)
T 2acx_A 377 EMIAGQSPFQQRKKKIKREEVERLVKEV--PEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL 451 (576)
T ss_dssp HHHHSSCSSSCSSSCCCHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred HHHhCCCCCcccccchhHHHHHHHhhcc--cccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence 9999 676542 122333333322 22233333 4445999999999999999 78999999999985
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-34 Score=299.72 Aligned_cols=212 Identities=17% Similarity=0.227 Sum_probs=163.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ ++.... .+++|||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 63 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 138 (302)
T 2j7t_A 63 YIVEIEILATCDHPYIVKLLG-AYYHDG---KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRI 138 (302)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECC----CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCCEeeeee-eeeeCC---eEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 346778899999999999999 554443 67999999 8999999996545569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.+||+|||++..... ..
T Consensus 139 ~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-----------------------------------~~------------ 171 (302)
T 2j7t_A 139 IHRDLKAGNVLMTLEGDIRLADFGVSAKNLK-----------------------------------TL------------ 171 (302)
T ss_dssp CCCCCSGGGEEECTTSCEEECCCHHHHHHHH-----------------------------------HH------------
T ss_pred ccCCCCHHHEEECCCCCEEEEECCCCccccc-----------------------------------cc------------
Confidence 9999999999999999999998887621000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-----CCCCCccccchhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRL 297 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSL 297 (720)
. ......||+.|+|||++. +..++.++|||||
T Consensus 172 ------------------------------------~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~sl 208 (302)
T 2j7t_A 172 ------------------------------------Q-------KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSL 208 (302)
T ss_dssp ------------------------------------H-------C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHH
T ss_pred ------------------------------------c-------ccccccCChhhcCCeeeccccCCCCCCchhhhHHHH
Confidence 0 001146899999999983 5668999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCc-cccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-QLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
||++|+|++ ||.......... .+.....+. .....++. ..+|+.+||+.||.+|||+.++++||||......
T Consensus 209 G~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~ 285 (302)
T 2j7t_A 209 GITLIEMAQIEPPHHELNPMRVLL-KIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSN 285 (302)
T ss_dssp HHHHHHHHHSSCTTTTSCHHHHHH-HHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCCC
T ss_pred HHHHHHHhcCCCCCccCCHHHHHH-HHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhccc
Confidence 999999999 666554443333 333332222 22334444 4599999999999999999999999999987554
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-33 Score=318.52 Aligned_cols=207 Identities=18% Similarity=0.248 Sum_probs=164.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++||+
T Consensus 94 ~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iv 168 (504)
T 3q5i_A 94 YNEISLLKSLDHPNIIKLFD-VFEDKK---YFYLVTEFYEGGELFEQIINRH-KFDECDAANIMKQILSGICYLHKHNIV 168 (504)
T ss_dssp HHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEEcCC---EEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeE
Confidence 37888999999999999999 565543 68999999 8999999995443 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCC---ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 144 VHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 144 HrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||+|||++.++ .+||+|||++.......
T Consensus 169 H~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--------------------------------------------- 203 (504)
T 3q5i_A 169 HRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY--------------------------------------------- 203 (504)
T ss_dssp CSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTS---------------------------------------------
T ss_pred eCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCC---------------------------------------------
Confidence 999999999998776 69998888874321110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+ .++.++|||||||+
T Consensus 204 ----------------------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~i 236 (504)
T 3q5i_A 204 ----------------------------------------------KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVI 236 (504)
T ss_dssp ----------------------------------------------CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHH
Confidence 0011468999999999875 49999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCC--ccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLP--PQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p--~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|+|++ ||...... .....+..+.+. ...+..+ +...+||.+||++||.+|||+.|+|+||||+....
T Consensus 237 l~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~ 310 (504)
T 3q5i_A 237 MYILLCGYPPFGGQNDQ-DIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYAN 310 (504)
T ss_dssp HHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCC
T ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchh
Confidence 999999 67665444 444445444332 2222333 44559999999999999999999999999987644
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=294.00 Aligned_cols=213 Identities=13% Similarity=0.149 Sum_probs=164.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ ++.... .+|+|||| .+++|.+++... ..+++.+++.++.||+.||.|||++||
T Consensus 52 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i 126 (276)
T 2yex_A 52 IKKEICINKMLNHENVVKFYG-HRREGN---IQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIGI 126 (276)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCceeeee-EEEcCC---EEEEEEEecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 346777899999999999999 554443 67999999 788999999543 459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.........
T Consensus 127 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------------------- 161 (276)
T 2yex_A 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRE--------------------------------------------- 161 (276)
T ss_dssp ECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE---------------------------------------------
T ss_pred eccCCChHHEEEccCCCEEEeeCCCccccCCCcch---------------------------------------------
Confidence 99999999999999999999999887432110000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvll 301 (720)
. ......||+.|+|||++.+..+ +.++|||||||++
T Consensus 162 -----------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il 198 (276)
T 2yex_A 162 -----------------------R--------------------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198 (276)
T ss_dssp -----------------------C--------------------CBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHH
T ss_pred -----------------------h--------------------cccCCccccCccChHHHhcCCCCCCcchHHHHHHHH
Confidence 0 0011468999999999988774 7899999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCC-CCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRV-LPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~-~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|||++ ||............+.... ..+......+...+|+.+||+.||.+|||+.|+++||||+....
T Consensus 199 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~ 270 (276)
T 2yex_A 199 TAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK 270 (276)
T ss_dssp HHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred HHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence 99999 6765443322333333222 22222233344559999999999999999999999999998744
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-34 Score=297.98 Aligned_cols=209 Identities=18% Similarity=0.240 Sum_probs=143.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.+.. .+|++||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 57 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 132 (278)
T 3cok_A 57 RVQNEVKIHCQLKHPSILELYN-YFEDSN---YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG 132 (278)
T ss_dssp HHHHHHHHHTTBCCTTBCCEEE-EEECSS---EEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeEeEEE-EEccCC---eEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3446778999999999999999 555543 67999999 789999999776667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+........
T Consensus 133 i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~--------------------------------------------- 167 (278)
T 3cok_A 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE--------------------------------------------- 167 (278)
T ss_dssp EECSSCCGGGEEECTTCCEEECCCTTCEECC-------------------------------------------------
T ss_pred eecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC---------------------------------------------
Confidence 99999999999999999999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 168 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 202 (278)
T 3cok_A 168 ---------------------------------------------KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMF 202 (278)
T ss_dssp ---------------------------------------------------------------------CTHHHHHHHHH
T ss_pred ---------------------------------------------cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHH
Confidence 00013679999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|||++ ||....... ....+.... ...+... +...+|+.+||+.||.+|||+.++|+||||....
T Consensus 203 ~~l~~g~~p~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 270 (278)
T 3cok_A 203 YTLLIGRPPFDTDTVKN-TLNKVVLAD--YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS 270 (278)
T ss_dssp HHHHHSSCSSCCCSCC------CCSSC--CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred HHHHhCCCCCCChhHHH-HHHHHhhcc--cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence 99999 665543321 111221111 1112223 3445999999999999999999999999998753
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=302.92 Aligned_cols=209 Identities=20% Similarity=0.271 Sum_probs=148.0
Q ss_pred eeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|..+. ||||+++++ ++.+.. .+|+|||| .|++|.+++... ..+++.+++.|+.||+.||.|||++|
T Consensus 52 ~~~e~~~l~~l~~h~niv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ 126 (325)
T 3kn6_A 52 TQKEITALKLCEGHPNIVKLHE-VFHDQL---HTFLVMELLNGGELFERIKKK-KHFSETEASYIMRKLVSAVSHMHDVG 126 (325)
T ss_dssp HHHHHHHHHHTTTCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCCeeEEEE-EEEcCC---EEEEEEEccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346777888887 999999999 555543 67999999 889999999654 35999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC---ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.++ .+||+|||++........
T Consensus 127 ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~------------------------------------------ 164 (325)
T 3kn6_A 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ------------------------------------------ 164 (325)
T ss_dssp EECCCCCGGGEEEEC----CEEEECCCTTCEECCC---------------------------------------------
T ss_pred CeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC------------------------------------------
Confidence 99999999999998665 799988888743211100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 165 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG 196 (325)
T 3kn6_A 165 ------------------------------------------------PLKTPCFTLHYAAPELLNQNGYDESCDLWSLG 196 (325)
T ss_dssp -------------------------------------------------------------------CCCCHHHHHHHHH
T ss_pred ------------------------------------------------cccccCCCcCccCHHHhcCCCCCCccchHHHH
Confidence 00114679999999999999999999999999
Q ss_pred hhhhhccc---cCCCCc------hHHHHHHHhhcCCCC--cccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 299 VLLFELFC---PFSTGE------EKTRTMSSLRHRVLP--PQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 299 vll~eLlt---pf~~~~------~~~~~~~~l~~~~~p--~~~~~~-~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
|++|+|++ ||.... .....+..+..+.++ ...... .+...+||.+||++||.+|||+.|+++||||+.
T Consensus 197 ~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~ 276 (325)
T 3kn6_A 197 VILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQD 276 (325)
T ss_dssp HHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCT
T ss_pred HHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhcc
Confidence 99999999 665432 123445555544332 222223 344559999999999999999999999999987
Q ss_pred C
Q 004998 367 P 367 (720)
Q Consensus 367 ~ 367 (720)
.
T Consensus 277 ~ 277 (325)
T 3kn6_A 277 G 277 (325)
T ss_dssp T
T ss_pred C
Confidence 5
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-33 Score=300.09 Aligned_cols=210 Identities=17% Similarity=0.205 Sum_probs=157.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.... .+++|||| .+++|.+++... ..+++..++.++.||+.||.|||++||+
T Consensus 50 ~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH~~~iv 124 (311)
T 4agu_A 50 LREIRMLKQLKHPNLVNLLE-VFRRKR---RLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCHKHNCI 124 (311)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCccchhh-eeecCC---eEEEEEEeCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 37888999999999999999 555443 57999999 778888877544 4599999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+....... +
T Consensus 125 H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------------~-------------- 157 (311)
T 4agu_A 125 HRDVKPENILITKHSVIKLCDFGFARLLTGPS---------------------------------D-------------- 157 (311)
T ss_dssp CCCCSGGGEEECTTSCEEECCCTTCEECC---------------------------------------------------
T ss_pred CCCCChhhEEEcCCCCEEEeeCCCchhccCcc---------------------------------c--------------
Confidence 99999999999999999999998874321110 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVLLF 302 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvll~ 302 (720)
......||++|+|||++.+ ..++.++|||||||++|
T Consensus 158 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~ 194 (311)
T 4agu_A 158 -------------------------------------------YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFA 194 (311)
T ss_dssp ---------------------------------------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHH
T ss_pred -------------------------------------------ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHH
Confidence 0011367999999999987 45899999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhh--cCC------------------CCc---------cccccCchHHHHHHHcCCCCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLR--HRV------------------LPP---------QLLLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~--~~~------------------~p~---------~~~~~~p~~~~li~~~L~~dP~ 350 (720)
+|++ ||.............. ... .+. .+....+...+|+.+||++||.
T Consensus 195 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 274 (311)
T 4agu_A 195 ELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPT 274 (311)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTT
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChh
Confidence 9999 6665544322211111 010 000 0011223345999999999999
Q ss_pred CCCChHHHHcCcccCCCcc
Q 004998 351 GRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||+.|+|+||||+....
T Consensus 275 ~Rpt~~ell~hp~f~~~~~ 293 (311)
T 4agu_A 275 ERLTCEQLLHHPYFENIRE 293 (311)
T ss_dssp TSCCHHHHHTSGGGTTCC-
T ss_pred hcCCHHHHhcChHHHhccC
Confidence 9999999999999998744
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-33 Score=308.36 Aligned_cols=214 Identities=17% Similarity=0.199 Sum_probs=162.1
Q ss_pred eehhhhcccCCCCCceecccceeecC----------------------------------CCCCcEEEEEecCCCCHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENE----------------------------------AAIDPFVHAIEWGDVSLRQW 110 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~----------------------------------~~~~~~~lv~E~~ggsL~~~ 110 (720)
.+|..+|..++|||||++++.++... .....+++||||.+++|.+.
T Consensus 48 ~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~ 127 (383)
T 3eb0_A 48 NRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKV 127 (383)
T ss_dssp CHHHHHHTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCSEEHHHH
T ss_pred HHHHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHH
Confidence 36888999999999999999544322 22335899999966798888
Q ss_pred Hh---CCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCccccccccccc
Q 004998 111 LD---KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNME 186 (720)
Q Consensus 111 L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~ 186 (720)
+. ..+..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 128 l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~----------- 196 (383)
T 3eb0_A 128 LKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE----------- 196 (383)
T ss_dssp HHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS-----------
T ss_pred HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC-----------
Confidence 73 3455699999999999999999999999999999999999998 68899999998874321110
Q ss_pred ccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCc
Q 004998 187 TKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPM 266 (720)
Q Consensus 187 ~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~ 266 (720)
T Consensus 197 -------------------------------------------------------------------------------- 196 (383)
T 3eb0_A 197 -------------------------------------------------------------------------------- 196 (383)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccCCcccCCccccCCC-CCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCC-----------------
Q 004998 267 KQILLMETNWYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV----------------- 325 (720)
Q Consensus 267 ~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~----------------- 325 (720)
......||+.|+|||++.+.. ++.++|||||||++|||++ ||............+....
T Consensus 197 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~ 276 (383)
T 3eb0_A 197 PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEV 276 (383)
T ss_dssp CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--C
T ss_pred CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccc
Confidence 001146799999999998765 8999999999999999999 7776554433333322100
Q ss_pred -CCc--------cccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 326 -LPP--------QLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 326 -~p~--------~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|. .+....+. ..+||.+||++||.+|||+.|+|+||||+....
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 277 RFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp CCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHHH
T ss_pred cCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHHh
Confidence 110 01122333 459999999999999999999999999987533
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-34 Score=310.40 Aligned_cols=213 Identities=16% Similarity=0.235 Sum_probs=161.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCC---CCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAA---IDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~---~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|.+++||||+++++ ++..... ...+|++|||.+++|.+++.. .+++.+++.++.||+.||.|||+
T Consensus 69 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH~ 144 (353)
T 3coi_A 69 RAYRELLLLKHMQHENVIGLLD-VFTPASSLRNFYDFYLVMPFMQTDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIHS 144 (353)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSE-EECSCSSGGGCCCCEEEEECCSEEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcccHhh-eEecccccccceeEEEEeccccCCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHH
Confidence 4447888999999999999999 5544332 234699999977899887733 39999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+||+++.++.+||+|||.+...+..
T Consensus 145 ~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--------------------------------------------- 179 (353)
T 3coi_A 145 AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--------------------------------------------- 179 (353)
T ss_dssp TTCCCSSCCGGGEEECTTCCEEECSTTCTTC-------------------------------------------------
T ss_pred CCcccCCCCHHHEeECCCCcEEEeecccccCCCCC---------------------------------------------
Confidence 99999999999999999999999998887332100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLG 298 (720)
.....||+.|+|||++.+ ..++.++||||||
T Consensus 180 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG 211 (353)
T 3coi_A 180 ------------------------------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVG 211 (353)
T ss_dssp ----------------------------------------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHH
T ss_pred ------------------------------------------------ccccccCcCcCCHHHHhCcCCCCchhhHHHHH
Confidence 001367999999999987 5689999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhc-C----------------------------CCCccccccCchHHHHHHHcCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRH-R----------------------------VLPPQLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~----------------------------~~p~~~~~~~p~~~~li~~~L~ 346 (720)
|++|||++ ||............+.. + .++.......+...+||.+||+
T Consensus 212 ~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 291 (353)
T 3coi_A 212 CIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLE 291 (353)
T ss_dssp HHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcC
Confidence 99999999 66655433222111110 0 0011111223455699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCccchH
Q 004998 347 PEPSGRPKMGELLQSEFLNEPRDSME 372 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~~l~ 372 (720)
+||.+|||+.++|+||||+....+..
T Consensus 292 ~dp~~Rpt~~e~l~hp~f~~~~~~~~ 317 (353)
T 3coi_A 292 LDVDKRLTAAQALTHPFFEPFRDPEE 317 (353)
T ss_dssp SCTTTSCCHHHHHTSGGGTTTCCGGG
T ss_pred CCcccCCCHHHHhcCcchhhccCccc
Confidence 99999999999999999998755433
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-33 Score=312.03 Aligned_cols=214 Identities=16% Similarity=0.206 Sum_probs=161.0
Q ss_pred eehhhhcccCCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+|..+|.+++|||||++++.++.... ....+++||||.+++|.+++. .....+++..++.|+.||+.||.|||+
T Consensus 95 ~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~ 174 (420)
T 1j1b_A 95 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 174 (420)
T ss_dssp CHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 368889999999999999995544322 223467999997778887773 344569999999999999999999999
Q ss_pred cCceeccCCCCcEEEccC-CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSF-NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~-~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||+||||||+|||++.+ +.+||+|||+++......
T Consensus 175 ~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~------------------------------------------- 211 (420)
T 1j1b_A 175 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE------------------------------------------- 211 (420)
T ss_dssp TTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC-------------------------------------------
T ss_pred CCccccCCChhhEEEeCCCCeEEeccchhhhhcccCC-------------------------------------------
Confidence 999999999999999955 568999888874321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSL 297 (720)
.....+||++|+|||++.+. .|+.++|||||
T Consensus 212 ------------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSl 243 (420)
T 1j1b_A 212 ------------------------------------------------PNVSYICSRYYRAPELIFGATDYTSSIDVWSA 243 (420)
T ss_dssp ------------------------------------------------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHH
T ss_pred ------------------------------------------------CceeeeeCCCcCCHHHHcCCCCCCchhhhHHH
Confidence 00114789999999999775 59999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcC------------------CCCcc--------cccc-CchHHHHHHHcCCC
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHR------------------VLPPQ--------LLLK-FPKEASFCLWLLHP 347 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~------------------~~p~~--------~~~~-~p~~~~li~~~L~~ 347 (720)
||+||||++ ||............+... .+|.. +... .+...+||.+||++
T Consensus 244 G~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~ 323 (420)
T 1j1b_A 244 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 323 (420)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCS
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccC
Confidence 999999999 677655443333222210 01100 1112 23455999999999
Q ss_pred CCCCCCChHHHHcCcccCCCcc
Q 004998 348 EPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||.+|||+.|+|+||||.....
T Consensus 324 dP~~R~t~~e~l~hp~f~~~~~ 345 (420)
T 1j1b_A 324 TPTARLTPLEACAHSFFDELRD 345 (420)
T ss_dssp SGGGSCCHHHHHTSGGGGGGGC
T ss_pred ChhHCCCHHHHhCCHhhccccc
Confidence 9999999999999999987643
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-33 Score=313.23 Aligned_cols=196 Identities=16% Similarity=0.220 Sum_probs=151.0
Q ss_pred CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEE
Q 004998 75 DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFV 153 (720)
Q Consensus 75 ~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NIL 153 (720)
+||||+++++ ++.... .+|+||||.+++|.+++... ...+++..++.|+.||+.||.|||++|||||||||+|||
T Consensus 157 ~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIL 232 (429)
T 3kvw_A 157 NTMNVIHMLE-NFTFRN---HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENIL 232 (429)
T ss_dssp SCSCBCCEEE-EEEETT---EEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEE
T ss_pred CCcCEEEEEe-ecccCC---eEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeE
Confidence 7889999999 554443 68999999778999999443 345999999999999999999999999999999999999
Q ss_pred EccCCc--eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCc
Q 004998 154 MSSFNH--VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSA 231 (720)
Q Consensus 154 l~~~~~--vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~ 231 (720)
++.++. +||+|||++...+..
T Consensus 233 l~~~~~~~vkL~DFG~a~~~~~~--------------------------------------------------------- 255 (429)
T 3kvw_A 233 LKQQGRSGIKVIDFGSSCYEHQR--------------------------------------------------------- 255 (429)
T ss_dssp ESSTTSCCEEECCCTTCEETTCC---------------------------------------------------------
T ss_pred EccCCCcceEEeecccceecCCc---------------------------------------------------------
Confidence 998887 999988877321110
Q ss_pred cccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc---cC
Q 004998 232 YGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PF 308 (720)
Q Consensus 232 ~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt---pf 308 (720)
....+||+.|+|||++.+..++.++|||||||++|||++ ||
T Consensus 256 ------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf 299 (429)
T 3kvw_A 256 ------------------------------------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL 299 (429)
T ss_dssp ------------------------------------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred ------------------------------------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCC
Confidence 011468999999999999999999999999999999999 66
Q ss_pred CCCchHHHHHHHhhc-CCCCccc-------------------------------------------------------c-
Q 004998 309 STGEEKTRTMSSLRH-RVLPPQL-------------------------------------------------------L- 331 (720)
Q Consensus 309 ~~~~~~~~~~~~l~~-~~~p~~~-------------------------------------------------------~- 331 (720)
............+.. +..++.+ .
T Consensus 300 ~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 379 (429)
T 3kvw_A 300 PGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG 379 (429)
T ss_dssp CCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTT
T ss_pred CCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccc
Confidence 655443322222211 1111100 0
Q ss_pred ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 332 LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 332 ~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
...+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 380 ~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~ 415 (429)
T 3kvw_A 380 CDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR 415 (429)
T ss_dssp CCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC--
T ss_pred cchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccC
Confidence 012345699999999999999999999999999976
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-33 Score=298.06 Aligned_cols=209 Identities=17% Similarity=0.292 Sum_probs=161.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .|++|.+++...+ .+++.+++.++.||+.||.|||++|
T Consensus 57 ~~~~e~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ 131 (294)
T 4eqm_A 57 RFEREVHNSSQLSHQNIVSMID-VDEEDD---CYYLVMEYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAHDMR 131 (294)
T ss_dssp HHHHHHHHHTTCCBTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCCCceEEE-eeeeCC---eEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4558888999999999999999 555443 67999999 8999999995543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 132 i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 167 (294)
T 4eqm_A 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT-------------------------------------------- 167 (294)
T ss_dssp CCCCCCCGGGEEECTTSCEEECCCSSSTTC--------------------------------------------------
T ss_pred cccCCCCHHHEEECCCCCEEEEeCCCcccccccccc--------------------------------------------
Confidence 999999999999999999999999987433211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 168 ---------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l 202 (294)
T 4eqm_A 168 ---------------------------------------------QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVL 202 (294)
T ss_dssp ----------------------------------------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHH
T ss_pred ---------------------------------------------ccCccccCccccCHhHhcCCCCCchHhHHHHHHHH
Confidence 00114689999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCc--cccccCchH-HHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPP--QLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~--~~~~~~p~~-~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
|||++ ||............+.....+. .....+|.. .+++.+||++||.+||+..+.+.++|..
T Consensus 203 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~ 272 (294)
T 4eqm_A 203 YEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSS 272 (294)
T ss_dssp HHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred HHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence 99999 7877666555555554433221 223344444 4999999999999999555555555543
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=303.50 Aligned_cols=218 Identities=18% Similarity=0.199 Sum_probs=163.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------------------
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--------------------------- 114 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--------------------------- 114 (720)
+..+|..+|.+++|||||++++ ++.+.. .+|+|||| .|++|.+++...
T Consensus 74 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (345)
T 3hko_A 74 RIKTEVRLMKKLHHPNIARLYE-VYEDEQ---YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEA 149 (345)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcceeeh-hhccCC---eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccc
Confidence 3447888999999999999999 555443 68999999 899999998410
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCC--ceEEeccCcccCCCCCCccccc
Q 004998 115 ------------KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFN--HVSFIESASCSDSGSDSHEEGL 180 (720)
Q Consensus 115 ------------~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~--~vkliDfg~a~~~g~~~~~~~~ 180 (720)
...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||.+.........
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~--- 226 (345)
T 3hko_A 150 INGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG--- 226 (345)
T ss_dssp HHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC---
T ss_pred cccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCcc---
Confidence 11246788999999999999999999999999999999998766 8999999887432110000
Q ss_pred ccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcc
Q 004998 181 NTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEK 260 (720)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~ 260 (720)
.
T Consensus 227 ----------------------------~--------------------------------------------------- 227 (345)
T 3hko_A 227 ----------------------------E--------------------------------------------------- 227 (345)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------c---------------------------------------------------
Confidence 0
Q ss_pred cCCCCccccccccCCcccCCccccC--CCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCC-CC-cccccc
Q 004998 261 KQPFPMKQILLMETNWYASPEELAG--APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV-LP-PQLLLK 333 (720)
Q Consensus 261 ~~~~~~~~~~~~GT~~Y~APE~l~~--~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~-~p-~~~~~~ 333 (720)
........||+.|+|||++.+ ..++.++|||||||++|||++ ||............+.... ++ +.....
T Consensus 228 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (345)
T 3hko_A 228 ----YYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVL 303 (345)
T ss_dssp -----------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGS
T ss_pred ----cccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccC
Confidence 000011468999999999976 558999999999999999999 7776655544443333322 22 222223
Q ss_pred CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 334 FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 334 ~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
.+...+||.+||.+||.+|||+.++|+||||+...+.
T Consensus 304 ~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~~ 340 (345)
T 3hko_A 304 SPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDK 340 (345)
T ss_dssp CHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSSC
T ss_pred CHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChHh
Confidence 4455699999999999999999999999999987543
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-33 Score=297.72 Aligned_cols=213 Identities=16% Similarity=0.209 Sum_probs=160.2
Q ss_pred ehhhhccc---CCCCCceecccceeec-CCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 66 SDGVELTH---GDHLRNQGGLSGVCEN-EAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 66 ~e~~~Ls~---l~HpnIV~l~~~~~~~-~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+|..++.. ++||||+++++.+... ......+++||||.+++|.+++... ...+++..++.++.||+.||.|||++
T Consensus 60 ~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 139 (326)
T 1blx_A 60 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH 139 (326)
T ss_dssp HHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 45445544 4899999999943311 1223468999999667999999543 34599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||+++.++.+||+|||.+...+...
T Consensus 140 gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--------------------------------------------- 174 (326)
T 1blx_A 140 RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--------------------------------------------- 174 (326)
T ss_dssp TCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG---------------------------------------------
T ss_pred CceeccCCHHHeEEcCCCCEEEecCcccccccCCC---------------------------------------------
Confidence 99999999999999999999999998874321100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 175 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 208 (326)
T 1blx_A 175 ----------------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208 (326)
T ss_dssp ----------------------------------------------GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------CccccccccceeCHHHHhcCCCCcchhHHHHHHH
Confidence 0011468999999999999889999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCC------------------------ccccccCch-HHHHHHHcCCCCCCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLP------------------------PQLLLKFPK-EASFCLWLLHPEPSGR 352 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p------------------------~~~~~~~p~-~~~li~~~L~~dP~~R 352 (720)
+|||++ ||............+.....+ ..+...++. ..+||.+||++||.+|
T Consensus 209 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 288 (326)
T 1blx_A 209 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 288 (326)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTS
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccC
Confidence 999999 676655443322222110000 011123333 3499999999999999
Q ss_pred CChHHHHcCcccCCCcc
Q 004998 353 PKMGELLQSEFLNEPRD 369 (720)
Q Consensus 353 pta~eiL~hp~~~~~~~ 369 (720)
||+.|+|+||||+....
T Consensus 289 pt~~e~l~hp~~~~~~~ 305 (326)
T 1blx_A 289 ISAYSALSHPYFQDLER 305 (326)
T ss_dssp CCHHHHHTSGGGTTCCC
T ss_pred CCHHHHhcCccccccch
Confidence 99999999999998744
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-34 Score=308.67 Aligned_cols=208 Identities=18% Similarity=0.194 Sum_probs=161.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ- 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~- 140 (720)
+..+|..+|.+++||||+++++ ++..+. .+|+|||| .|++|.+++.... .+++..+..++.||+.||.|||++
T Consensus 77 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh~~~ 151 (360)
T 3eqc_A 77 QIIRELQVLHECNSPYIVGFYG-AFYSDG---EISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH 151 (360)
T ss_dssp HHHHHHGGGGGCCCTTBCCEEE-EEEETT---EEEEEECCCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCEEEEeE-EEEECC---EEEEEEECCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 3447888999999999999999 554443 58999999 7899999995543 499999999999999999999996
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.++|+|||++......
T Consensus 152 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---------------------------------------------- 185 (360)
T 3eqc_A 152 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---------------------------------------------- 185 (360)
T ss_dssp CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH----------------------------------------------
T ss_pred CEEcCCccHHHEEECCCCCEEEEECCCCcccccc----------------------------------------------
Confidence 9999999999999999999999998876211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..++.++|||||||+
T Consensus 186 ----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 219 (360)
T 3eqc_A 186 ----------------------------------------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 219 (360)
T ss_dssp ----------------------------------------------C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHH
T ss_pred ----------------------------------------------cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHH
Confidence 0011468999999999999989999999999999
Q ss_pred hhhccc---cCCCCchHHH-----------------------------------------HHHHhhcCCCCccccccCc-
Q 004998 301 LFELFC---PFSTGEEKTR-----------------------------------------TMSSLRHRVLPPQLLLKFP- 335 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~-----------------------------------------~~~~l~~~~~p~~~~~~~p- 335 (720)
+|+|++ ||........ ....+.....+......++
T Consensus 220 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (360)
T 3eqc_A 220 LVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSL 299 (360)
T ss_dssp HHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCH
T ss_pred HHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccH
Confidence 999999 7765433211 1111122222222222233
Q ss_pred hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 336 ~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
...+||.+||++||.+|||+.|+|+||||+..
T Consensus 300 ~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 331 (360)
T 3eqc_A 300 EFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 331 (360)
T ss_dssp HHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred HHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence 34599999999999999999999999999864
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-35 Score=319.16 Aligned_cols=202 Identities=11% Similarity=0.081 Sum_probs=149.2
Q ss_pred ehh---hhcccCCCCCceecccc------eeecCCC------------C--CcEEEEEecCCCCHHHHHhCCCC------
Q 004998 66 SDG---VELTHGDHLRNQGGLSG------VCENEAA------------I--DPFVHAIEWGDVSLRQWLDKPKR------ 116 (720)
Q Consensus 66 ~e~---~~Ls~l~HpnIV~l~~~------~~~~~~~------------~--~~~~lv~E~~ggsL~~~L~~~~~------ 116 (720)
+|. .+|++++|||||++++. ++++... . ...|++|||.+|+|.+++...+.
T Consensus 122 ~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~ 201 (377)
T 3byv_A 122 EEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHK 201 (377)
T ss_dssp HHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTH
T ss_pred HHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccc
Confidence 555 67888899999999942 2322211 0 13789999988899999954322
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCch
Q 004998 117 SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPL 196 (720)
Q Consensus 117 ~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 196 (720)
.+++..++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++..+..
T Consensus 202 ~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~---------------------- 259 (377)
T 3byv_A 202 SLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAR---------------------- 259 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTCE----------------------
T ss_pred cccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCCc----------------------
Confidence 1334888899999999999999999999999999999999999999988887321100
Q ss_pred hhHhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCc
Q 004998 197 DMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNW 276 (720)
Q Consensus 197 ~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~ 276 (720)
.....| +.
T Consensus 260 -----------------------------------------------------------------------~~~~~g-~~ 267 (377)
T 3byv_A 260 -----------------------------------------------------------------------VVSSVS-RG 267 (377)
T ss_dssp -----------------------------------------------------------------------EECCCC-TT
T ss_pred -----------------------------------------------------------------------ccCCCC-cC
Confidence 011467 89
Q ss_pred ccCCccccCC-----------CCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHH
Q 004998 277 YASPEELAGA-----------PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCL 342 (720)
Q Consensus 277 Y~APE~l~~~-----------~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~ 342 (720)
|+|||++.+. .++.++|||||||++|||++ ||...... .....+. . ......+...+||.
T Consensus 268 y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~-~~~~~~~----~-~~~~~~~~~~~li~ 341 (377)
T 3byv_A 268 FEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAAL-GGSEWIF----R-SCKNIPQPVRALLE 341 (377)
T ss_dssp CCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC-------CCSGGGG----S-SCCCCCHHHHHHHH
T ss_pred ccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccc-cchhhhh----h-hccCCCHHHHHHHH
Confidence 9999999887 79999999999999999999 55432211 0111111 1 11122244559999
Q ss_pred HcCCCCCCCCCChHHHHcCcccCCC
Q 004998 343 WLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 343 ~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+||.+||.+|||+.|+|+||||+..
T Consensus 342 ~~L~~dp~~Rpt~~e~l~hp~f~~~ 366 (377)
T 3byv_A 342 GFLRYPKEDRLLPLQAMETPEYEQL 366 (377)
T ss_dssp HHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred HHcCCCchhCCCHHHHhhChHHHHH
Confidence 9999999999999999999999875
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-33 Score=298.95 Aligned_cols=208 Identities=14% Similarity=0.202 Sum_probs=157.7
Q ss_pred eeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.++. ||||+++++ ++.+.. ....+++||| .+++|.+++.. +++.+++.++.||+.||.|||++|
T Consensus 77 ~~~E~~~l~~l~~~~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH~~~ 150 (330)
T 3nsz_A 77 IKREIKILENLRGGPNIITLAD-IVKDPV-SRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMG 150 (330)
T ss_dssp HHHHHHHHHHHTTSTTBCCEEE-EEECTT-TCCEEEEEECCCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCCCEEEeee-eeccCC-CCceEEEEeccCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHHhCC
Confidence 347788899987 999999999 554432 2368999999 88999998843 899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCC-ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 142 IVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|+||||||+|||++.++ .+||+|||++.......
T Consensus 151 ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--------------------------------------------- 185 (330)
T 3nsz_A 151 IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--------------------------------------------- 185 (330)
T ss_dssp EECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC---------------------------------------------
T ss_pred eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC---------------------------------------------
Confidence 99999999999999776 89999988874321110
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+ ..++.++|||||||
T Consensus 186 ----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~ 219 (330)
T 3nsz_A 186 ----------------------------------------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGC 219 (330)
T ss_dssp ----------------------------------------------CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHH
T ss_pred ----------------------------------------------ccccccccccccChhhhcCCCcCCchhhHHHHHH
Confidence 0011367999999999987 55899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh-------------c--CCCCcc--------------------ccc-cCchHHHH
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLR-------------H--RVLPPQ--------------------LLL-KFPKEASF 340 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~-------------~--~~~p~~--------------------~~~-~~p~~~~l 340 (720)
++|||++ ||.........+..+. . ...++. ... ..+...+|
T Consensus 220 il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 299 (330)
T 3nsz_A 220 MLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDF 299 (330)
T ss_dssp HHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHH
T ss_pred HHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHH
Confidence 9999999 6644322211111111 0 011111 011 23445599
Q ss_pred HHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 341 CLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 341 i~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|.+||++||.+|||+.|+|+||||+...
T Consensus 300 i~~~L~~dP~~Rpta~e~l~hp~f~~~~ 327 (330)
T 3nsz_A 300 LDKLLRYDHQSRLTAREAMEHPYFYTVV 327 (330)
T ss_dssp HHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred HHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence 9999999999999999999999999863
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-33 Score=303.46 Aligned_cols=207 Identities=17% Similarity=0.205 Sum_probs=160.3
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..+|.++ +||||+++++ +++++. .+|+|||| .|++|.+++.+.+ .+++.+++.++.||+.||.|||++||+
T Consensus 64 ~E~~~l~~~~~hp~iv~~~~-~~~~~~---~~~lv~E~~~gg~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH~~giv 138 (342)
T 2qr7_A 64 EEIEILLRYGQHPNIITLKD-VYDDGK---YVYVVTELMKGGELLDKILRQK-FFSEREASAVLFTITKTVEYLHAQGVV 138 (342)
T ss_dssp HHHHHHHHHTTSTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHTCT-TCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCcCeEEE-EEEcCC---EEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCcE
Confidence 455567666 7999999999 565543 68999999 8999999996544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccC----CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 144 VHNVRPSCFVMSSF----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 144 HrDLKP~NILl~~~----~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||||||+|||+... +.+||+|||++....... .
T Consensus 139 HrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~---------------------------------~---------- 175 (342)
T 2qr7_A 139 HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN---------------------------------G---------- 175 (342)
T ss_dssp CSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT---------------------------------C----------
T ss_pred eccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC---------------------------------C----------
Confidence 99999999998543 349998888874321110 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+..|+.++|||||||
T Consensus 176 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~ 208 (342)
T 2qr7_A 176 -----------------------------------------------LLMTPCYTANFVAPEVLERQGYDAACDIWSLGV 208 (342)
T ss_dssp -----------------------------------------------CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------------------ceeccCCCccccCHHHhcCCCCCCccCeeeHhH
Confidence 001146899999999998877999999999999
Q ss_pred hhhhccc---cCCCC--chHHHHHHHhhcCCCC--ccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 300 LLFELFC---PFSTG--EEKTRTMSSLRHRVLP--PQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~--~~~~~~~~~l~~~~~p--~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|||++ ||... ......+..+..+.++ ...+...+ ...+||.+||++||.+|||+.++|+||||...
T Consensus 209 il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~ 284 (342)
T 2qr7_A 209 LLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW 284 (342)
T ss_dssp HHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred HHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence 9999999 66542 2333455555544332 22333344 44599999999999999999999999999653
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-33 Score=291.86 Aligned_cols=204 Identities=14% Similarity=0.188 Sum_probs=162.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.+.. .+|++||| .+++|.+++...+ .+++..++.++.||+.||.|||++||
T Consensus 61 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i 135 (284)
T 2vgo_A 61 LRREIEIQSHLRHPNILRMYN-YFHDRK---RIYLMLEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCHERKV 135 (284)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred HHHHHHHHhcCCCCCEeeEEE-EEEcCC---EEEEEEEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346777999999999999999 555443 67999999 7889999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+......
T Consensus 136 ~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~------------------------------------------------ 167 (284)
T 2vgo_A 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPSL------------------------------------------------ 167 (284)
T ss_dssp ECCCCSGGGEEECTTCCEEECCCTTCEECSSS------------------------------------------------
T ss_pred eecCCCHHHEEEcCCCCEEEecccccccCccc------------------------------------------------
Confidence 99999999999999999999998876321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 168 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 203 (284)
T 2vgo_A 168 --------------------------------------------RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCY 203 (284)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHH
Confidence 001136899999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|++ ||....... ....+..... .++..+ +...+||.+||+.||.+|||+.++++||||+..
T Consensus 204 ~l~~g~~pf~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~ 269 (284)
T 2vgo_A 204 EFLVGMPPFDSPSHTE-THRRIVNVDL--KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269 (284)
T ss_dssp HHHHSSCTTCCSSHHH-HHHHHHTTCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred HHHHCCCCCCCCCHhH-HHHHHhcccc--CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence 9999 676554432 2333332211 122223 344599999999999999999999999999865
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-33 Score=293.61 Aligned_cols=215 Identities=15% Similarity=0.208 Sum_probs=155.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-------CCCCCCHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-------PKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-------~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..++.+++||||+++++ ++.... .+++|||| .|++|.+++.. ....+++..++.++.||+.||.
T Consensus 60 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 135 (303)
T 2vwi_A 60 LLKEIQAMSQCHHPNIVSYYT-SFVVKD---ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135 (303)
T ss_dssp ------CCCCCCCTTBCCEEE-EEESSS---CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCEeeEEE-EEeecC---CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHH
Confidence 346777999999999999999 554443 57999999 79999999952 3445899999999999999999
Q ss_pred HHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 136 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|||++||+||||||+||+++.++.++|+|||.+....... ++.
T Consensus 136 ~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~---------------------------------~~~---- 178 (303)
T 2vwi_A 136 YLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG---------------------------------DIT---- 178 (303)
T ss_dssp HHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-------------------------------------------
T ss_pred HHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCC---------------------------------Ccc----
Confidence 9999999999999999999999999999998874321110 000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccc
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDI 294 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDI 294 (720)
.........||+.|+|||++.+ ..++.++||
T Consensus 179 ------------------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 210 (303)
T 2vwi_A 179 ------------------------------------------------RNKVRKTFVGTPCWMAPEVMEQVRGYDFKADI 210 (303)
T ss_dssp ---------------------------------------------------------CCCTTCCHHHHHHHHCCCTHHHH
T ss_pred ------------------------------------------------chhhhcccCCCccccCHHHhccccCCCchhhH
Confidence 0000011468999999999976 458999999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhcCCC-------CccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcc
Q 004998 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL-------PPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEF 363 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~-------p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~ 363 (720)
|||||++|||++ ||............+..... .+.....++. ..+|+.+||++||.+|||+.++++|||
T Consensus 211 ~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~ 290 (303)
T 2vwi_A 211 WSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 290 (303)
T ss_dssp HHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTT
T ss_pred HHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChh
Confidence 999999999999 67665444333333332211 1112223333 459999999999999999999999999
Q ss_pred cCCC
Q 004998 364 LNEP 367 (720)
Q Consensus 364 ~~~~ 367 (720)
|+..
T Consensus 291 ~~~~ 294 (303)
T 2vwi_A 291 FQKA 294 (303)
T ss_dssp C---
T ss_pred hhcC
Confidence 9876
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-33 Score=302.11 Aligned_cols=217 Identities=15% Similarity=0.142 Sum_probs=160.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
+...+...+..++||||+++++.+..... ....+++||||.+++|.+.+. .....+++..++.++.||+.||.|
T Consensus 65 ~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~ 144 (360)
T 3e3p_A 65 RELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGC 144 (360)
T ss_dssp HHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 33455666788899999999994443222 222378999996667776663 345568999999999999999999
Q ss_pred HH--HcCceeccCCCCcEEEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccc
Q 004998 137 AH--SQGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 137 LH--s~gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|| ++||+||||||+|||++. ++.+||+|||++.......
T Consensus 145 lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~-------------------------------------- 186 (360)
T 3e3p_A 145 LHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE-------------------------------------- 186 (360)
T ss_dssp HTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTS--------------------------------------
T ss_pred HhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCC--------------------------------------
Confidence 99 999999999999999996 8999999998874332110
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccc
Q 004998 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCAS 292 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~s 292 (720)
......||+.|+|||++.+.. ++.++
T Consensus 187 -----------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~ 213 (360)
T 3e3p_A 187 -----------------------------------------------------PNVAYICSRYYRAPELIFGNQHYTTAV 213 (360)
T ss_dssp -----------------------------------------------------CCCSTTSCGGGCCHHHHTTCSSCCTHH
T ss_pred -----------------------------------------------------CcccccCCcceeCHHHHcCCCCCCcHH
Confidence 001146799999999997665 89999
Q ss_pred cchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCc-c-----------------------------ccccCchHHH
Q 004998 293 DIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP-Q-----------------------------LLLKFPKEAS 339 (720)
Q Consensus 293 DIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~-~-----------------------------~~~~~p~~~~ 339 (720)
|||||||++|||++ ||............+.....++ . .....+...+
T Consensus 214 Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (360)
T 3e3p_A 214 DIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYD 293 (360)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHH
Confidence 99999999999999 7766554433322222111110 0 0001234459
Q ss_pred HHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 340 FCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 340 li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
||.+||++||.+|||+.|+|+||||+....+
T Consensus 294 li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 324 (360)
T 3e3p_A 294 LLSALLQYLPEERMKPYEALCHPYFDELHDP 324 (360)
T ss_dssp HHHHHTCSSGGGSCCHHHHTTSGGGGGGGCT
T ss_pred HHHHHhccCccccCCHHHHhcCccccccCCc
Confidence 9999999999999999999999999987543
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-33 Score=300.66 Aligned_cols=209 Identities=21% Similarity=0.266 Sum_probs=158.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... .+|+|||| .+++|.+++.... .+++..++.++.||+.||.|||++||
T Consensus 71 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~i 145 (331)
T 4aaa_A 71 AMREIKLLKQLRHENLVNLLE-VCKKKK---RWYLVFEFVDHTILDDLELFPN-GLDYQVVQKYLFQIINGIGFCHSHNI 145 (331)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHSTT-CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhhCCCCCEeeEEE-EeecCC---EEEEEEecCCcchHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 347888999999999999999 555443 67999999 7777777764443 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.+........
T Consensus 146 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------- 179 (331)
T 4aaa_A 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE---------------------------------------------- 179 (331)
T ss_dssp CCCCCCGGGEEECTTSCEEECCCTTC------------------------------------------------------
T ss_pred EccCcChheEEEcCCCcEEEEeCCCceeecCCcc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
......||++|+|||++.+. .++.++|||||||++
T Consensus 180 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il 215 (331)
T 4aaa_A 180 --------------------------------------------VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLV 215 (331)
T ss_dssp ------------------------------------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHH
T ss_pred --------------------------------------------ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHH
Confidence 00113689999999999876 589999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc-CCCCc------------------c---------cccc-CchHHHHHHHcCCCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRH-RVLPP------------------Q---------LLLK-FPKEASFCLWLLHPEP 349 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~-~~~p~------------------~---------~~~~-~p~~~~li~~~L~~dP 349 (720)
|+|++ ||............+.. +..++ . .... .+...+||.+||++||
T Consensus 216 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 295 (331)
T 4aaa_A 216 TEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDP 295 (331)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSG
T ss_pred HHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCc
Confidence 99999 67665544332222110 00100 0 0112 2334599999999999
Q ss_pred CCCCChHHHHcCcccCCC
Q 004998 350 SGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~ 367 (720)
.+|||+.|+|+||||+..
T Consensus 296 ~~Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 296 DKRPFCAELLHHDFFQMD 313 (331)
T ss_dssp GGSCCGGGGGGSHHHHGG
T ss_pred ccCCCHHHHhcCchhccC
Confidence 999999999999999875
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-33 Score=318.62 Aligned_cols=207 Identities=17% Similarity=0.221 Sum_probs=164.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+|..+|.+++||||+++++ ++++.. .+|+|||| .|++|.++|... ...+++..++.|+.||+.||.|||++
T Consensus 233 ~~E~~iL~~l~hp~Iv~l~~-~~~~~~---~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~ 308 (543)
T 3c4z_A 233 MVEKKILAKVHSRFIVSLAY-AFETKT---DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR 308 (543)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCEeeEEE-EEeeCC---EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc
Confidence 36778999999999999999 555543 58999999 899999999543 34599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.+|++||+|||++........
T Consensus 309 gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~-------------------------------------------- 344 (543)
T 3c4z_A 309 NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT-------------------------------------------- 344 (543)
T ss_dssp TEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC--------------------------------------------
T ss_pred CCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc--------------------------------------------
Confidence 999999999999999999999999988743211100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.....+||+.|+|||++.+..|+.++|||||||+
T Consensus 345 ----------------------------------------------~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvi 378 (543)
T 3c4z_A 345 ----------------------------------------------KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVT 378 (543)
T ss_dssp ----------------------------------------------CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCccccChhhhcCCCCChHHhcCcchHH
Confidence 0011478999999999999899999999999999
Q ss_pred hhhccc---cCCCCc---hHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~---~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
+|||++ ||.... ........+..... .++..+ +...+||.+||++||.+||+ +.+|++||||+..
T Consensus 379 lyelltG~~PF~~~~~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i 455 (543)
T 3c4z_A 379 LYEMIAARGPFRARGEKVENKELKQRVLEQAV--TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI 455 (543)
T ss_dssp HHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred HHHHHhCCCCCCCCccchhHHHHHHHHhhccc--CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence 999999 676542 22333333333221 122233 44559999999999999995 5899999999986
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-32 Score=292.55 Aligned_cols=212 Identities=13% Similarity=0.163 Sum_probs=166.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 71 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i 146 (314)
T 3com_A 71 IIKEISIMQQCDSPHVVKYYG-SYFKNT---DLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK 146 (314)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCccEEE-EEEeCC---EEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 346788999999999999999 444432 57999999 7889999996445569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+|+||||+||+++.++.++|+|||.+........
T Consensus 147 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------- 180 (314)
T 3com_A 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA---------------------------------------------- 180 (314)
T ss_dssp ECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS----------------------------------------------
T ss_pred cCCCcCHHHEEECCCCCEEEeecccchhhhhhcc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 181 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 216 (314)
T 3com_A 181 --------------------------------------------KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAI 216 (314)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHH
T ss_pred --------------------------------------------ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHH
Confidence 001146899999999999988999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|++ ||.........................++ ...+||.+||..||.+|||+.++|+||||.....
T Consensus 217 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~ 287 (314)
T 3com_A 217 EMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKG 287 (314)
T ss_dssp HHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCC
T ss_pred HHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCc
Confidence 9999 66655443332222222211111223344 4459999999999999999999999999998744
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=3.1e-33 Score=311.65 Aligned_cols=212 Identities=15% Similarity=0.177 Sum_probs=153.6
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.++ +|||||++++ ++.+.. .+|+||||.+++|.+++......+.+.+++.++.||+.||.|||++||
T Consensus 64 ~~~E~~~l~~l~~HpnIv~l~~-~~~~~~---~~~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 139 (432)
T 3p23_A 64 ADREVQLLRESDEHPNVIRYFC-TEKDRQ---FQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNI 139 (432)
T ss_dssp CHHHHHHHHHSCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhccCCCCcCeEEE-EEecCC---EEEEEEECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcC
Confidence 44788899888 7999999999 555443 579999997789999997666557777788999999999999999999
Q ss_pred eeccCCCCcEEEccC-----CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 143 VVHNVRPSCFVMSSF-----NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 143 vHrDLKP~NILl~~~-----~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+||||||+|||++.+ ..+||+|||++........ .+
T Consensus 140 vHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~--------------------------------~~------- 180 (432)
T 3p23_A 140 VHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH--------------------------------SF------- 180 (432)
T ss_dssp CCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----------------------------------------------
T ss_pred EeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc--------------------------------ce-------
Confidence 999999999999532 3577888887743211100 00
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC---CCCCccccc
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDI 294 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDI 294 (720)
.......||++|+|||++.+ ..++.++||
T Consensus 181 ------------------------------------------------~~~~~~~gt~~y~APE~l~~~~~~~~t~~~Di 212 (432)
T 3p23_A 181 ------------------------------------------------SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDI 212 (432)
T ss_dssp -----------------------------------------------------CCSCTTSCCGGGTSCC---CCCTHHHH
T ss_pred ------------------------------------------------eeccccCCCcCccChhhhhcccccCCCcHHHH
Confidence 00012478999999999974 447889999
Q ss_pred hhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCcccc-c-cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 295 YRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLL-L-KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 295 wSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~-~-~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|||||++|||++ ||...... .....+.....+.... . ..+...+||.+||+.||.+|||+.|+|+||||...
T Consensus 213 wSlG~il~ellt~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~ 290 (432)
T 3p23_A 213 FSAGCVFYYVISEGSHPFGKSLQR-QANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290 (432)
T ss_dssp HHHHHHHHHHHTTSCBTTBSTTTH-HHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred HHHHHHHHHHHcCCCCCcchhhHH-HHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence 999999999998 45433222 1111222111111111 1 11223599999999999999999999999999875
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=99.98 E-value=5.9e-33 Score=293.85 Aligned_cols=206 Identities=17% Similarity=0.238 Sum_probs=164.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.+.. .+|++||| .|++|.+++...+ .+++..++.++.||+.||.|||++||
T Consensus 53 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i 127 (304)
T 2jam_A 53 LENEIAVLKKIKHENIVTLED-IYESTT---HYYLVMQLVSGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLHENGI 127 (304)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCeeehhh-hcccCC---EEEEEEEcCCCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 346788999999999999999 555443 67999999 7899999995443 49999999999999999999999999
Q ss_pred eeccCCCCcEEE---ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 143 VVHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||||||+||++ +.++.++|+|||.+......
T Consensus 128 ~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~--------------------------------------------- 162 (304)
T 2jam_A 128 VHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG--------------------------------------------- 162 (304)
T ss_dssp CCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB---------------------------------------------
T ss_pred cccCCCHHHEEEecCCCCCCEEEccCCcceecCCC---------------------------------------------
Confidence 999999999999 67889999888876321100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..++.++|||||||
T Consensus 163 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ 195 (304)
T 2jam_A 163 -----------------------------------------------IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGV 195 (304)
T ss_dssp -----------------------------------------------TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHH
T ss_pred -----------------------------------------------ccccccCCCCccChHHhccCCCCchhhHHHHHH
Confidence 000136899999999999988999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCC--CccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVL--PPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~--p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++|+|++ ||...... .....+..+.. +.......+ ...+||.+||.+||.+|||+.|+|+||||...
T Consensus 196 il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 268 (304)
T 2jam_A 196 ITYILLCGYPPFYEETES-KLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGN 268 (304)
T ss_dssp HHHHHHHSSCTTTTSCHH-HHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred HHHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence 9999999 66554443 33444444322 223333344 44599999999999999999999999999875
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.7e-33 Score=299.18 Aligned_cols=208 Identities=21% Similarity=0.248 Sum_probs=160.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++... .+|+|||| .+++|.+++... ..+++..++.++.||+.||.|||++|
T Consensus 61 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ 134 (322)
T 2ycf_A 61 NVETEIEILKKLNHPCIIKIKN-FFDAE----DYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLHENG 134 (322)
T ss_dssp CHHHHHHHHHHCCCTTBCCEEE-EEESS----SEEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHhCCCCCCceEee-EEcCC----ceEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999 55443 37999999 789999999544 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCc---eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++.++. +||+|||.+...+...
T Consensus 135 ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------- 171 (322)
T 2ycf_A 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS------------------------------------------- 171 (322)
T ss_dssp EECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCH-------------------------------------------
T ss_pred eeccCCCHHHEEEecCCCCCeEEEccCccceeccccc-------------------------------------------
Confidence 999999999999987664 9999888874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CCCCCccccch
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIY 295 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIw 295 (720)
......||+.|+|||++. ...++.++|||
T Consensus 172 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~ 203 (322)
T 2ycf_A 172 ------------------------------------------------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW 203 (322)
T ss_dssp ------------------------------------------------HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHH
T ss_pred ------------------------------------------------ccccccCCcCccCchhhccCCCCCCCchhhHH
Confidence 000136899999999974 45589999999
Q ss_pred hhhhhhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||++|+|++ ||............+..+. +.+......+ ...+||.+||+.||.+|||+.++|+||||...
T Consensus 204 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~ 281 (322)
T 2ycf_A 204 SLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE 281 (322)
T ss_dssp HHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred HHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence 99999999999 6654332222222333222 2233333344 44599999999999999999999999999864
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=99.98 E-value=1e-32 Score=300.62 Aligned_cols=204 Identities=18% Similarity=0.203 Sum_probs=160.4
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++.++ +||||+++++ ++.... ..|+|||| .|++|.+++... ..+++..++.++.||+.||.|||+.||+
T Consensus 148 ~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH~~gi~ 222 (365)
T 2y7j_A 148 RETHILRQVAGHPHIITLID-SYESSS---FMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLHANNIV 222 (365)
T ss_dssp HHHHHHHHHTTCTTBCCEEE-EEEBSS---EEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhcCCCCEeEEEE-EEeeCC---EEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 677788887 8999999999 554443 68999999 889999999543 3499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.++|+|||++.......
T Consensus 223 H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~------------------------------------------------ 254 (365)
T 2y7j_A 223 HRDLKPENILLDDNMQIRLSDFGFSCHLEPGE------------------------------------------------ 254 (365)
T ss_dssp CSCCSGGGEEECTTCCEEECCCTTCEECCTTC------------------------------------------------
T ss_pred cCCCCHHHEEECCCCCEEEEecCcccccCCCc------------------------------------------------
Confidence 99999999999999999999998773321100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC------CCCCccccchhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG------APVSCASDIYRL 297 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~------~~~s~~sDIwSL 297 (720)
......||+.|+|||++.+ ..++.++|||||
T Consensus 255 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~sl 291 (365)
T 2y7j_A 255 -------------------------------------------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWAC 291 (365)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHH
T ss_pred -------------------------------------------ccccCCCCCCccChhhccccccccCcCCCchhhHHhH
Confidence 0011468999999999863 348899999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCc--c-ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP--Q-LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~--~-~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
||++|||++ ||...... .....+..+.... . +....+...+||.+||+.||.+|||+.|+|+||||+.
T Consensus 292 G~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r 365 (365)
T 2y7j_A 292 GVILFTLLAGSPPFWHRRQI-LMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365 (365)
T ss_dssp HHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred HHHHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence 999999999 66654443 3333343333222 1 2233344569999999999999999999999999973
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.8e-33 Score=300.70 Aligned_cols=208 Identities=18% Similarity=0.220 Sum_probs=164.6
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHH------HhCC-CCCCCHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQW------LDKP-KRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~------L~~~-~~~l~~~~~~~i~~QIl~aL~y 136 (720)
.+|..++.+++||||+++++ ++.... .+|+|||| .+++|.++ +... ...+++..++.++.||+.||.|
T Consensus 91 ~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~ 166 (348)
T 2pml_X 91 KNELQIITDIKNEYCLTCEG-IITNYD---EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSY 166 (348)
T ss_dssp HHHHHHHTTCCCTTBCCCSE-EEESSS---EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCcceEEE-EEeeCC---eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHH
Confidence 37888999999999999999 555443 68999999 78899998 6332 4569999999999999999999
Q ss_pred HHH-cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 137 AHS-QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 137 LHs-~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
||+ +||+||||||+||+++.++.++|+|||.+......
T Consensus 167 lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~----------------------------------------- 205 (348)
T 2pml_X 167 IHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK----------------------------------------- 205 (348)
T ss_dssp HHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTT-----------------------------------------
T ss_pred HhccCCEeecCCChHhEEEcCCCcEEEeccccccccccc-----------------------------------------
Confidence 999 99999999999999999999999998887332110
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCc-ccc
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSC-ASD 293 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~-~sD 293 (720)
......||+.|+|||++.+. .++. ++|
T Consensus 206 ---------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~D 234 (348)
T 2pml_X 206 ---------------------------------------------------KIKGSRGTYEFMPPEFFSNESSYNGAKVD 234 (348)
T ss_dssp ---------------------------------------------------EECSSCSCGGGCCGGGGSSCCCEEHHHHH
T ss_pred ---------------------------------------------------cccCCCCCcCccCchhhcCCCCCCcchhh
Confidence 00114689999999999887 5666 999
Q ss_pred chhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccc-----------------cccC-chHHHHHHHcCCCCCCCC
Q 004998 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL-----------------LLKF-PKEASFCLWLLHPEPSGR 352 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~-----------------~~~~-p~~~~li~~~L~~dP~~R 352 (720)
||||||++|||++ ||............+.....+... ...+ +...+||.+||+.||.+|
T Consensus 235 i~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 314 (348)
T 2pml_X 235 IWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAER 314 (348)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGS
T ss_pred HHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhC
Confidence 9999999999999 776655534455555443222110 0223 344599999999999999
Q ss_pred CChHHHHcCcccCCCc
Q 004998 353 PKMGELLQSEFLNEPR 368 (720)
Q Consensus 353 pta~eiL~hp~~~~~~ 368 (720)
||+.|+|+||||+...
T Consensus 315 ps~~e~l~hp~f~~~~ 330 (348)
T 2pml_X 315 ITSEDALKHEWLADTN 330 (348)
T ss_dssp CCHHHHHTSGGGTTCC
T ss_pred CCHHHHhcCccccCCC
Confidence 9999999999999863
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=99.98 E-value=6e-33 Score=290.16 Aligned_cols=207 Identities=17% Similarity=0.263 Sum_probs=163.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.... .+++|||| .+++|.+++... ..+++.+++.++.||+.||.|||++||
T Consensus 55 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i 129 (283)
T 3bhy_A 55 IEREVNILREIRHPNIITLHD-IFENKT---DVVLILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLHSKRI 129 (283)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCeeehhh-eecCCC---eEEEEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 347888999999999999999 555443 57999999 789999999543 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCC----ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 143 VVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 143 vHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+||||||+||+++.++ .++|+|||.+.......
T Consensus 130 ~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~------------------------------------------- 166 (283)
T 3bhy_A 130 AHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN------------------------------------------- 166 (283)
T ss_dssp ECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC----------------------------------------------
T ss_pred cCCCCChHHEEEecCCCCCCceEEEecccceeccCCC-------------------------------------------
Confidence 9999999999998777 79998888773321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 167 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 198 (283)
T 3bhy_A 167 ------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 198 (283)
T ss_dssp -----------------------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred ------------------------------------------------cccccCCCcCccCcceecCCCCCcchhhhhHH
Confidence 00113679999999999988899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcC--CCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~--~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+... ..++......+. ..+|+.+||+.||.+|||+.++|+||||+..
T Consensus 199 ~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 272 (283)
T 3bhy_A 199 VITYILLSGASPFLGETKQ-ETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272 (283)
T ss_dssp HHHHHHHHSSCTTCCSSHH-HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred HHHHHHHHCCCCCCCcchH-HHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence 99999999 67665443 333333322 223333334444 4599999999999999999999999999875
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-32 Score=291.14 Aligned_cols=207 Identities=19% Similarity=0.250 Sum_probs=164.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .+++|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 66 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ 139 (303)
T 3a7i_A 66 DIQQEITVLSQCDSPYVTKYYG-SYLKDT---KLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEK 139 (303)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeEEEE-EEecCC---eEEEEEEeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4447788999999999999999 554433 57999999 88899999954 34999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+........
T Consensus 140 i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------------------------------------- 174 (303)
T 3a7i_A 140 KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--------------------------------------------- 174 (303)
T ss_dssp EECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC---------------------------------------------
T ss_pred CccCCCChheEEECCCCCEEEeecccceecCcccc---------------------------------------------
Confidence 99999999999999999999999988743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 175 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 209 (303)
T 3a7i_A 175 ---------------------------------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITA 209 (303)
T ss_dssp ---------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHH
T ss_pred ---------------------------------------------ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHH
Confidence 00114689999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||...... .....+..... +.+...++. ..+|+.+||++||.+|||+.++++||||...
T Consensus 210 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~ 277 (303)
T 3a7i_A 210 IELARGEPPHSELHPM-KVLFLIPKNNP-PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN 277 (303)
T ss_dssp HHHHHSSCTTTTSCHH-HHHHHHHHSCC-CCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred HHHccCCCCCCCcCHH-HHHHHhhcCCC-CCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcC
Confidence 99999 66554433 22333333332 333334444 4599999999999999999999999999765
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.1e-33 Score=296.71 Aligned_cols=202 Identities=17% Similarity=0.190 Sum_probs=154.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC--CCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~--~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..+|..+|.+++||||+++++ ++.... .+++|||| .+++|.+++..... .+++..++.++.||+.||.|||++
T Consensus 81 ~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 156 (309)
T 3p86_A 81 FLREVAIMKRLRHPNIVLFMG-AVTQPP---NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156 (309)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSTT---CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEEECC---ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC
Confidence 347888999999999999999 554443 46999999 89999999965432 389999999999999999999999
Q ss_pred C--ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 141 G--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 141 g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
| |+||||||+|||++.++.+||+|||++........
T Consensus 157 ~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~------------------------------------------ 194 (309)
T 3p86_A 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL------------------------------------------ 194 (309)
T ss_dssp SSCCCCTTCCGGGEEECTTCCEEECCCC----------------------------------------------------
T ss_pred CCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccc------------------------------------------
Confidence 9 99999999999999999999999988742211100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 195 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG 226 (309)
T 3p86_A 195 ------------------------------------------------SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFG 226 (309)
T ss_dssp -------------------------------------------------------CCTTSCHHHHTTCCCCTTHHHHHHH
T ss_pred ------------------------------------------------ccccCCCCccccChhhhcCCCCCchhhHHHHH
Confidence 00114689999999999999999999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|||++ ||....... ....+........++..+ +...+||.+||+.||.+|||+.++++
T Consensus 227 ~il~elltg~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 291 (309)
T 3p86_A 227 VILWELATLQQPWGNLNPAQ-VVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD 291 (309)
T ss_dssp HHHHHHHHCCCTTTTSCHHH-HHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCHHH-HHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99999999 776655443 333332222222333333 44569999999999999999999987
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=8.4e-33 Score=290.56 Aligned_cols=211 Identities=19% Similarity=0.192 Sum_probs=160.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
..+|..++..++||||+++++ ++.... .+++|||| .+++|.+++... ...+++..++.++.||+.||.|||++
T Consensus 66 ~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 141 (295)
T 2clq_A 66 LHEEIALHKHLKHKNIVQYLG-SFSENG---FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN 141 (295)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCEeeEee-EEEeCC---cEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC
Confidence 346778999999999999999 554443 67999999 799999999543 23467999999999999999999999
Q ss_pred CceeccCCCCcEEEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 141 GIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||+||||||+||+++. ++.++|+|||.+........
T Consensus 142 ~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------- 178 (295)
T 2clq_A 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP------------------------------------------- 178 (295)
T ss_dssp TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----------------------------------------------
T ss_pred CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-------------------------------------------
Confidence 9999999999999987 89999999988743211000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC--CCccccchhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRL 297 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwSL 297 (720)
......||+.|+|||++.+.. ++.++|||||
T Consensus 179 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~sl 211 (295)
T 2clq_A 179 -----------------------------------------------CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSL 211 (295)
T ss_dssp -------------------------------------------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHH
T ss_pred -----------------------------------------------cccccCCCccccChhhhcCCCCCCCcHHHHHHH
Confidence 001136899999999997654 8899999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
||++|+|++ ||.........+.........+.+...++ ...+|+.+||++||.+|||+.++|+||||+...
T Consensus 212 G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 212 GCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSS 286 (295)
T ss_dssp HHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred HHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence 999999999 55443222222222222122233333444 445999999999999999999999999998763
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.2e-32 Score=294.00 Aligned_cols=213 Identities=15% Similarity=0.206 Sum_probs=159.7
Q ss_pred eehhhhcccC-CCCCceecccceeecCC--CCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~--~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+|..++.++ +||||+++++.+..... ....+|+|||| .+++|.+++... ...+++..++.++.||+.||.|||+
T Consensus 68 ~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 147 (326)
T 2x7f_A 68 KQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQ 147 (326)
T ss_dssp HHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3666778887 89999999994433221 13468999999 788999999543 3459999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+||+|||++........
T Consensus 148 ~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------- 184 (326)
T 2x7f_A 148 HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG------------------------------------------- 184 (326)
T ss_dssp TTCCCCCCSGGGEEECTTCCEEECCCTTTC--------------------------------------------------
T ss_pred CCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCcc-------------------------------------------
Confidence 9999999999999999999999999988743211000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-----CCCCCccccc
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDI 294 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDI 294 (720)
......||+.|+|||++. +..++.++||
T Consensus 185 -----------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di 217 (326)
T 2x7f_A 185 -----------------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDL 217 (326)
T ss_dssp -----------------------------------------------------CCGGGCCHHHHC--------CCTTHHH
T ss_pred -----------------------------------------------ccccccCCccccChhhhccccccCcCCCccchH
Confidence 001136899999999997 4558999999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|||||++|+|++ ||......... ..+.....+......++. ..+||.+||..||.+|||+.++++||||....
T Consensus 218 ~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~ 294 (326)
T 2x7f_A 218 WSLGITAIEMAEGAPPLCDMHPMRAL-FLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQP 294 (326)
T ss_dssp HHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCT
T ss_pred HHHHHHHHHHHhCCCCCCCCcHHHHH-HHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCc
Confidence 999999999999 66655444332 333333333333344444 45999999999999999999999999998763
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=2.4e-33 Score=307.21 Aligned_cols=252 Identities=16% Similarity=0.116 Sum_probs=158.8
Q ss_pred ehhhhcccCC--------CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGD--------HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 66 ~e~~~Ls~l~--------HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
+|..+|.++. ||||+++++.+...+.....+|+||||.+++|.+++. .....+++..++.|+.||+.||.|
T Consensus 82 ~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~ 161 (397)
T 1wak_A 82 DEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDY 161 (397)
T ss_dssp HHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHH
Confidence 6666777764 8889999995544433445789999998888888883 333569999999999999999999
Q ss_pred HHHc-CceeccCCCCcEEEccCCceEEeccCcccCCCCC---CcccccccccccccCCCCCCc-hhhHhhhhcccccccc
Q 004998 137 AHSQ-GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSD---SHEEGLNTQNMETKDLSSPLP-LDMLQRRTRLRREDLQ 211 (720)
Q Consensus 137 LHs~-gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~l~Dfg 211 (720)
||++ ||+||||||+|||++.++.....+++........ ....................+ .........++++|||
T Consensus 162 lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG 241 (397)
T 1wak_A 162 LHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLG 241 (397)
T ss_dssp HHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGG
T ss_pred HHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccc
Confidence 9998 9999999999999987653211111111000000 000000000000000000000 1112223356777887
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcc
Q 004998 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~ 291 (720)
++...... ....+||+.|+|||++.+..++.+
T Consensus 242 ~a~~~~~~------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~ 273 (397)
T 1wak_A 242 NACWVHKH------------------------------------------------FTEDIQTRQYRSLEVLIGSGYNTP 273 (397)
T ss_dssp GCEETTBC------------------------------------------------SCSCCSCGGGCCHHHHHTSCCCTH
T ss_pred cccccccc------------------------------------------------CccCCCCCcccCChhhcCCCCCcH
Confidence 76532210 011468999999999999999999
Q ss_pred ccchhhhhhhhhccc---cCCCCch------HH--HHHHHhhcCCCCccc------------------------------
Q 004998 292 SDIYRLGVLLFELFC---PFSTGEE------KT--RTMSSLRHRVLPPQL------------------------------ 330 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~------~~--~~~~~l~~~~~p~~~------------------------------ 330 (720)
+|||||||++|||++ ||.+... .. ..+..+. +.+|..+
T Consensus 274 ~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (397)
T 1wak_A 274 ADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELL-GKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFE 352 (397)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHH-CSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhc-CCCChHHhhcccccccccCCccccccccccCCcchhH
Confidence 999999999999999 6654321 11 1111111 1111110
Q ss_pred --------ccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 331 --------LLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 331 --------~~~-~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
... .+...+||.+||++||.+|||+.|+|+||||+.
T Consensus 353 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~ 397 (397)
T 1wak_A 353 VLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 397 (397)
T ss_dssp HHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred hhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence 000 122349999999999999999999999999973
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=8.2e-33 Score=291.14 Aligned_cols=206 Identities=20% Similarity=0.259 Sum_probs=163.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ ++.+.. .+|++||| .+++|.+++.... .+++.+++.++.||+.||.|||++||
T Consensus 62 ~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i 136 (294)
T 2rku_A 62 MSMEISIHRSLAHQHVVGFHG-FFEDND---FVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRV 136 (294)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCEeeeee-eeccCC---EEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 336788999999999999999 555443 67999999 8899999985433 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.+||+|||.+........
T Consensus 137 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~---------------------------------------------- 170 (294)
T 2rku_A 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---------------------------------------------- 170 (294)
T ss_dssp ECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC----------------------------------------------
T ss_pred cccCCChHhEEEcCCCCEEEEeccCceecccCcc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 171 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 206 (294)
T 2rku_A 171 --------------------------------------------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMY 206 (294)
T ss_dssp --------------------------------------------CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHH
Confidence 001146899999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|++ ||....... ....+.....+ +.... +...+|+.+||+.||.+|||+.|+++||||...
T Consensus 207 ~l~~g~~p~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 272 (294)
T 2rku_A 207 TLLVGKPPFETSCLKE-TYLRIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 272 (294)
T ss_dssp HHHHSSCTTCCSSHHH-HHHHHHTTCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred HHHhCCCCCCCCCHHH-HHHHHhhccCC--CccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecC
Confidence 9999 666554432 33333332221 11223 445699999999999999999999999999865
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=6.9e-33 Score=298.04 Aligned_cols=205 Identities=20% Similarity=0.263 Sum_probs=163.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++..++||||+++++ ++.+.. .+|++||| .+++|.+++.... .+++.+++.++.||+.||.|||++||+
T Consensus 89 ~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~iv 163 (335)
T 2owb_A 89 SMEISIHRSLAHQHVVGFHG-FFEDND---FVFVVLELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVI 163 (335)
T ss_dssp HHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCTTCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEecCC---eEEEEEecCCCCCHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCCE
Confidence 36788999999999999999 555543 68999999 8899999985433 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||.+........
T Consensus 164 H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 196 (335)
T 2owb_A 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE----------------------------------------------- 196 (335)
T ss_dssp CSCCCGGGEEECTTCCEEECCCTTCEECCSTTC-----------------------------------------------
T ss_pred ecCCCchhEEEcCCCCEEEeeccCceecccCcc-----------------------------------------------
Confidence 999999999999999999999988743211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..++.++|||||||++||
T Consensus 197 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~ 233 (335)
T 2owb_A 197 -------------------------------------------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYT 233 (335)
T ss_dssp -------------------------------------------CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHH
Confidence 0011468999999999999889999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++ ||....... ....+...... +...+ +...+||.+||+.||.+|||+.|+|+||||...
T Consensus 234 l~~g~~pf~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~ 298 (335)
T 2owb_A 234 LLVGKPPFETSCLKE-TYLRIKKNEYS--IPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 298 (335)
T ss_dssp HHHSSCTTCCSSHHH-HHHHHHHTCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred HHHCcCCCCCCCHHH-HHHHHhcCCCC--CCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence 999 666554332 23333332221 11223 445699999999999999999999999999875
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.7e-33 Score=295.88 Aligned_cols=216 Identities=18% Similarity=0.267 Sum_probs=159.6
Q ss_pred eeeehhhhcccCC--CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~--HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..++.++. ||||+++++ ++.... .+|++||+.+++|.+++.... .+++.+++.++.||+.||.|||++
T Consensus 72 ~~~~E~~~l~~l~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~ 146 (313)
T 3cek_A 72 SYRNEIAYLNKLQQHSDKIIRLYD-YEITDQ---YIYMVMECGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIHQH 146 (313)
T ss_dssp HHHHHHHHHHHHGGGCTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccccCCceEEEEE-EeecCC---EEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3346777888887 599999999 554443 589999999999999996544 599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++ ++.+||+|||++.........
T Consensus 147 ~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~~------------------------------------------- 182 (313)
T 3cek_A 147 GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS------------------------------------------- 182 (313)
T ss_dssp TCCCCCCCGGGEEEE-TTEEEECCCSSSCC--------------------------------------------------
T ss_pred CceecCCCcccEEEE-CCeEEEeeccccccccCcccc-------------------------------------------
Confidence 999999999999996 589999999887443211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----------CCCC
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-----------APVS 289 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----------~~~s 289 (720)
.......||+.|+|||++.+ ..++
T Consensus 183 ---------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~ 217 (313)
T 3cek_A 183 ---------------------------------------------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKIS 217 (313)
T ss_dssp ----------------------------------------------------CCGGGCCHHHHTTCC----------CCC
T ss_pred ---------------------------------------------ccccCCCCCCCcCCHHHHhhcccccccccccccCC
Confidence 00011468999999999976 3588
Q ss_pred ccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 290 CASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
.++|||||||++|||++ ||.........+..+........+....+ ...+|+.+||+.||.+||++.|+|+||||+
T Consensus 218 ~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~ 297 (313)
T 3cek_A 218 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297 (313)
T ss_dssp HHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred chHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCcccc
Confidence 99999999999999999 66654433333333333333333333334 455999999999999999999999999999
Q ss_pred CCccchH
Q 004998 366 EPRDSME 372 (720)
Q Consensus 366 ~~~~~l~ 372 (720)
....+..
T Consensus 298 ~~~~~~~ 304 (313)
T 3cek_A 298 IQTHPVN 304 (313)
T ss_dssp CC-----
T ss_pred CCCCchh
Confidence 8754433
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1.5e-34 Score=315.54 Aligned_cols=207 Identities=11% Similarity=0.092 Sum_probs=140.1
Q ss_pred hhhcccCCCCCceecccce------eecCCC--------------CCcEEEEEecCCCCHHHHHhCCCCCCCHHHH----
Q 004998 68 GVELTHGDHLRNQGGLSGV------CENEAA--------------IDPFVHAIEWGDVSLRQWLDKPKRSVDVYEC---- 123 (720)
Q Consensus 68 ~~~Ls~l~HpnIV~l~~~~------~~~~~~--------------~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~---- 123 (720)
..+|.. +||||++++..+ +..... ...+|+||||.+++|.+++...+..+++...
T Consensus 116 ~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~ 194 (371)
T 3q60_A 116 AARLLG-ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGIL 194 (371)
T ss_dssp HHHHHC-----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHH
T ss_pred HHHhcc-cChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhh
Confidence 456666 899988866322 211111 1347999999669999999654333555555
Q ss_pred --HHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhh
Q 004998 124 --LHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQR 201 (720)
Q Consensus 124 --~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (720)
..++.||+.||.|||++|||||||||+|||++.++.+||+|||+++..+..
T Consensus 195 vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~--------------------------- 247 (371)
T 3q60_A 195 ALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR--------------------------- 247 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCE---------------------------
T ss_pred hHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCC---------------------------
Confidence 677799999999999999999999999999999999999988887432110
Q ss_pred hhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCc
Q 004998 202 RTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPE 281 (720)
Q Consensus 202 r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 281 (720)
.....+|+.|+|||
T Consensus 248 ------------------------------------------------------------------~~~~~~t~~y~aPE 261 (371)
T 3q60_A 248 ------------------------------------------------------------------GPASSVPVTYAPRE 261 (371)
T ss_dssp ------------------------------------------------------------------EEGGGSCGGGCCHH
T ss_pred ------------------------------------------------------------------ccCccCCcCCcChh
Confidence 00135679999999
Q ss_pred cccC--CCCCccccchhhhhhhhhccc---cCCCCchHHH-HHHH---hh--c-CCCCccccccCchHHHHHHHcCCCCC
Q 004998 282 ELAG--APVSCASDIYRLGVLLFELFC---PFSTGEEKTR-TMSS---LR--H-RVLPPQLLLKFPKEASFCLWLLHPEP 349 (720)
Q Consensus 282 ~l~~--~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~-~~~~---l~--~-~~~p~~~~~~~p~~~~li~~~L~~dP 349 (720)
++.+ ..++.++|||||||++|||++ ||........ .+.. .. . ....+......+...+||.+||++||
T Consensus 262 ~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 341 (371)
T 3q60_A 262 FLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDR 341 (371)
T ss_dssp HHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSST
T ss_pred hccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCCh
Confidence 9987 569999999999999999999 6654422100 0000 00 0 11111112223445599999999999
Q ss_pred CCCCChHHHHcCcccCCCc
Q 004998 350 SGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 350 ~~Rpta~eiL~hp~~~~~~ 368 (720)
++|||+.++|+||||+...
T Consensus 342 ~~Rpt~~e~l~hp~f~~~~ 360 (371)
T 3q60_A 342 RRRLLPLEAMETPEFLQLQ 360 (371)
T ss_dssp TTCCCHHHHTTSHHHHHHH
T ss_pred hhCCCHHHHhcCHHHHHHH
Confidence 9999999999999998763
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1e-32 Score=285.85 Aligned_cols=200 Identities=16% Similarity=0.175 Sum_probs=157.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR-SVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~-~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..++.+++||||+++++ ++.+.. ...++++||| .+++|.+++..... .+++.+++.++.||+.||.|||++
T Consensus 53 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 130 (271)
T 3kmu_A 53 DFNEECPRLRIFSHPNVLPVLG-ACQSPP-APHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL 130 (271)
T ss_dssp HHHHHGGGGCCCSCTTEECEEE-EECTTT-SSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhcCCCchhheEE-EEccCC-CCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 3457888999999999999999 554432 2367999999 88999999965433 589999999999999999999999
Q ss_pred C--ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 141 G--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 141 g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
| |+||||||+||+++.++.++++|||+.....
T Consensus 131 ~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~---------------------------------------------- 164 (271)
T 3kmu_A 131 EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ---------------------------------------------- 164 (271)
T ss_dssp SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS----------------------------------------------
T ss_pred CCceecCCCccceEEEcCCcceeEEeccceeeec----------------------------------------------
Confidence 9 9999999999999999999998776541100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCc---cccch
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSC---ASDIY 295 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~---~sDIw 295 (720)
.....||+.|+|||++.+..++. ++|||
T Consensus 165 -------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~ 195 (271)
T 3kmu_A 165 -------------------------------------------------SPGRMYAPAWVAPEALQKKPEDTNRRSADMW 195 (271)
T ss_dssp -------------------------------------------------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHH
T ss_pred -------------------------------------------------ccCccCCccccChhhhccCCCCCCCchhhHH
Confidence 00136799999999998876444 79999
Q ss_pred hhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++|||++ ||.................. +.++..++ ...+|+.+||+.||.+|||+.++++
T Consensus 196 slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (271)
T 3kmu_A 196 SFAVLLWELVTREVPFADLSNMEIGMKVALEGLR-PTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVP 263 (271)
T ss_dssp HHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHhCCCCccccChHHHHHHHHhcCCC-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999999999 77666555443444433333 33333444 4559999999999999999999985
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=1e-32 Score=295.31 Aligned_cols=206 Identities=15% Similarity=0.103 Sum_probs=159.7
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+..+|..++.+++||||+++++ ++... .+++|||| .+++|.+++......+++..++.++.||+.||.|||++
T Consensus 60 ~~~~~e~~~l~~l~h~~iv~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 134 (325)
T 3kex_A 60 QAVTDHMLAIGSLDHAHIVRLLG-LCPGS----SLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH 134 (325)
T ss_dssp CSCCHHHHHHHTCCCTTBCCEEE-EECBS----SEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCcCeEEE-EEcCC----ccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34557888999999999999999 55433 47899999 89999999976655699999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||+++........
T Consensus 135 ~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~------------------------------------------- 171 (325)
T 3kex_A 135 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ------------------------------------------- 171 (325)
T ss_dssp TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTC-------------------------------------------
T ss_pred CCCCCccchheEEECCCCeEEECCCCcccccCccccc-------------------------------------------
Confidence 9999999999999999999999999988543221000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
.......||+.|+|||++.+..++.++|||||||+
T Consensus 172 ---------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 206 (325)
T 3kex_A 172 ---------------------------------------------LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVT 206 (325)
T ss_dssp ---------------------------------------------CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccCCCCcccccChHHhccCCCChhhHhHHhHHH
Confidence 00011357889999999998889999999999999
Q ss_pred hhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 301 LFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 301 l~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
+|||++ ||...... .....+.....++......+...+|+.+||..||.+|||+.+++++
T Consensus 207 l~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 207 VWELMTFGAEPYAGLRLA-EVPDLLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp HHHHHTTSCCTTTTSCTT-HHHHHHHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred HHHHHhCCCCCccccCHH-HHHHHHHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999998 56554332 2333333332222222233455699999999999999999999873
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=4.5e-33 Score=290.49 Aligned_cols=213 Identities=17% Similarity=0.230 Sum_probs=165.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..+|..++.+++||||+++++.+.... ...+|+|||| .+++|.+++.. ....+++..++.++.||+.||.|||+
T Consensus 52 ~~~e~~~l~~l~h~~i~~~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~ 129 (279)
T 2w5a_A 52 LVSEVNLLRELKHPNIVRYYDRIIDRT--NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129 (279)
T ss_dssp HHHHHHHHHHCCCTTBCCEEEEEEEGG--GTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCCeEEEEEecCC--CceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 347788999999999999999433222 2368999999 78899999943 23459999999999999999999999
Q ss_pred cC-----ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 140 QG-----IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 140 ~g-----IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
+| |+||||||+||+++.++.+||+|||.+...+... .
T Consensus 130 ~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~---------------------------------~----- 171 (279)
T 2w5a_A 130 RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT---------------------------------S----- 171 (279)
T ss_dssp HC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---C---------------------------------H-----
T ss_pred ccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecccc---------------------------------c-----
Confidence 99 9999999999999999999999998874321110 0
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
......||+.|+|||++.+..++.++||
T Consensus 172 ----------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di 199 (279)
T 2w5a_A 172 ----------------------------------------------------FAKTFVGTPYYMSPEQMNRMSYNEKSDI 199 (279)
T ss_dssp ----------------------------------------------------HHHHHHSCCTTCCHHHHHCC-CCHHHHH
T ss_pred ----------------------------------------------------cccccCCCccccChHHhccCCCCchhhH
Confidence 0001367999999999999889999999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
|||||++|+|++ ||...... .....+..+..++......+...+|+.+||+.||.+|||+.|+|+|+|+.+...
T Consensus 200 ~slG~il~~l~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~ 276 (279)
T 2w5a_A 200 WSLGCLLYELCALMPPFTAFSQK-ELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHHH 276 (279)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGGS
T ss_pred HHHHHHHHHHHHCCCCCcccCHH-HHHHHHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhcc
Confidence 999999999999 66655433 344445544443322223344559999999999999999999999999998743
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=7.2e-33 Score=299.14 Aligned_cols=224 Identities=17% Similarity=0.212 Sum_probs=163.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++||||+++++ ++... .....+|++|||.+++|.+++... .+++..++.++.||+.||.|||++
T Consensus 55 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~ 131 (353)
T 2b9h_A 55 RTLREIKILKHFKHENIITIFN-IQRPDSFENFNEVYIIQELMQTDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLHGS 131 (353)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-ECCCSCSTTCCCEEEEECCCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCcCCCcCCeee-eecccccCccceEEEEEeccCccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3447888999999999999999 44322 223468999999778999999653 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++.++.+||+|||++........... ...
T Consensus 132 ~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~----------------------------~~~---------- 173 (353)
T 2b9h_A 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS----------------------------EPT---------- 173 (353)
T ss_dssp TEECSCCCGGGEEECTTCCEEECCCTTCEECC------------------------------------------------
T ss_pred CeecCCCCHHHeEEcCCCcEEEEeccccccccccccccc----------------------------Ccc----------
Confidence 999999999999999999999999998854322110000 000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGv 299 (720)
.........+||+.|+|||++.+ ..++.++|||||||
T Consensus 174 ------------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~ 211 (353)
T 2b9h_A 174 ------------------------------------------GQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGC 211 (353)
T ss_dssp ------------------------------------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHH
T ss_pred ------------------------------------------ccccchhhccccccccCCeeeccCCCccchhhHHHHHH
Confidence 00000112478999999998865 56899999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhh--cCC-----------------------CCc----cc-cccCchHHHHHHHcCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLR--HRV-----------------------LPP----QL-LLKFPKEASFCLWLLH 346 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~--~~~-----------------------~p~----~~-~~~~p~~~~li~~~L~ 346 (720)
++|||++ ||.............. ... .+. .. ....+...+||.+||+
T Consensus 212 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 291 (353)
T 2b9h_A 212 ILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLV 291 (353)
T ss_dssp HHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSC
T ss_pred HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcC
Confidence 9999999 6766543322211111 000 000 01 1223344599999999
Q ss_pred CCCCCCCChHHHHcCcccCCCcc
Q 004998 347 PEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+||.+|||+.|+|+||||+....
T Consensus 292 ~dP~~Rpt~~ell~hp~~~~~~~ 314 (353)
T 2b9h_A 292 FDPAKRITAKEALEHPYLQTYHD 314 (353)
T ss_dssp SSGGGSCCHHHHHTSGGGTTTCC
T ss_pred cCcccCCCHHHHhcCccccccCC
Confidence 99999999999999999998654
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.98 E-value=9e-33 Score=299.84 Aligned_cols=207 Identities=17% Similarity=0.220 Sum_probs=158.8
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.++ +||||+++++ ++.... .+|+|||| .+++|.+++.... .+++.+++.++.||+.||.|||++||
T Consensus 106 ~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~i 180 (355)
T 1vzo_A 106 RTERQVLEHIRQSPFLVTLHY-AFQTET---KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKLGI 180 (355)
T ss_dssp CCHHHHHHHHHTCTTBCCEEE-EEEETT---EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHccCCCceeEEEE-EEeeCc---eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 3677788888 6999999999 554443 57999999 8899999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||+++.......
T Consensus 181 vH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~---------------------------------------------- 214 (355)
T 1vzo_A 181 IYRDIKLENILLDSNGHVVLTDFGLSKEFVADET---------------------------------------------- 214 (355)
T ss_dssp CCCCCCGGGEEECTTSCEEESCSSEEEECCGGGG----------------------------------------------
T ss_pred ccCCCCHHHEEECCCCcEEEeeCCCCeecccCCC----------------------------------------------
Confidence 9999999999999999999999988743211000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC--CCCccccchhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA--PVSCASDIYRLGVL 300 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~s~~sDIwSLGvl 300 (720)
......+||+.|+|||++.+. .++.++|||||||+
T Consensus 215 -------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~i 251 (355)
T 1vzo_A 215 -------------------------------------------ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVL 251 (355)
T ss_dssp -------------------------------------------GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHH
T ss_pred -------------------------------------------CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHH
Confidence 000114789999999999864 37899999999999
Q ss_pred hhhccc---cCCCCc---hHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGE---EKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~---~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
+|||++ ||.... ........+... .+ .+...+ +...+||.+||.+||.+|| ++.|+++||||...
T Consensus 252 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~ 328 (355)
T 1vzo_A 252 MYELLTGASPFTVDGEKNSQAEISRRILKS-EP-PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 328 (355)
T ss_dssp HHHHHHSSCTTSCTTSCCCHHHHHHHHHHC-CC-CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred HHHHHHCCCCCccCCccchHHHHHHHHhcc-CC-CCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence 999999 665321 222222222222 11 222333 3445999999999999999 99999999999976
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=9.5e-33 Score=295.33 Aligned_cols=206 Identities=17% Similarity=0.250 Sum_probs=153.4
Q ss_pred ehhhhcccCCCCC------ceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLR------NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~Ls~l~Hpn------IV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+|..++..++|+| |+++++ ++.... .+|+||||.+++|.+++... ...+++.+++.++.||+.||.|||
T Consensus 60 ~e~~~l~~l~~~~~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH 135 (339)
T 1z57_A 60 SEIQVLEHLNTTDPNSTFRCVQMLE-WFEHHG---HICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH 135 (339)
T ss_dssp HHHHHHHHHHHHCTTCTTCBCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcCCCCceeeEeeec-ccccCC---cEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 5666777666654 899999 555443 68999999999999999543 345899999999999999999999
Q ss_pred HcCceeccCCCCcEEEcc-------------------CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhH
Q 004998 139 SQGIVVHNVRPSCFVMSS-------------------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 199 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~-------------------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (720)
++||+||||||+|||++. ++.+||+|||.+...
T Consensus 136 ~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~---------------------------- 187 (339)
T 1z57_A 136 SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYD---------------------------- 187 (339)
T ss_dssp HTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEET----------------------------
T ss_pred HCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccC----------------------------
Confidence 999999999999999987 445666655554211
Q ss_pred hhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccC
Q 004998 200 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 279 (720)
Q Consensus 200 ~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 279 (720)
... .....||+.|+|
T Consensus 188 -----------------~~~------------------------------------------------~~~~~gt~~y~a 202 (339)
T 1z57_A 188 -----------------DEH------------------------------------------------HSTLVSTRHYRA 202 (339)
T ss_dssp -----------------TSC------------------------------------------------CCSSCSCGGGCC
T ss_pred -----------------ccc------------------------------------------------cccccCCccccC
Confidence 000 011468999999
Q ss_pred CccccCCCCCccccchhhhhhhhhccc---cCCCCchHHH--HHHHhhcCCCCcccc-----------------------
Q 004998 280 PEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTR--TMSSLRHRVLPPQLL----------------------- 331 (720)
Q Consensus 280 PE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~--~~~~l~~~~~p~~~~----------------------- 331 (720)
||++.+..++.++|||||||++|||++ ||........ .+..+. +.+|+.+.
T Consensus 203 PE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (339)
T 1z57_A 203 PEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL-GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAG 281 (339)
T ss_dssp HHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHH-CSCCHHHHHHCSCGGGEETTEECCCTTSHHH
T ss_pred hHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCCHHHHhhccchhHHhhcccccccccccc
Confidence 999999889999999999999999999 6665543321 111111 11221110
Q ss_pred ------------------ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 332 ------------------LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 332 ------------------~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
...+...+||.+||++||.+|||+.|+|+||||+....
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~ 337 (339)
T 1z57_A 282 RYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKK 337 (339)
T ss_dssp HHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGGC
T ss_pred chhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHhc
Confidence 00123459999999999999999999999999987643
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.98 E-value=1.9e-32 Score=290.82 Aligned_cols=219 Identities=15% Similarity=0.152 Sum_probs=161.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecC-----------CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE-----------AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIV 131 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~-----------~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl 131 (720)
+..+|..++.+++||||+++++ ++... .....+|+||||.+++|.+++.+ ..+++..++.++.||+
T Consensus 54 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~~~~~~~~~~~~qi~ 130 (320)
T 2i6l_A 54 HALREIKIIRRLDHDNIVKVFE-ILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQ--GPLLEEHARLFMYQLL 130 (320)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECTTSCBCCC----CCSCSEEEEEEECCSEEHHHHHTT--CCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCeeEEEE-eccccccccccccccccccCceeEEeeccCCCHHHHhhc--CCccHHHHHHHHHHHH
Confidence 3347888999999999999999 44222 22346899999966799999954 3489999999999999
Q ss_pred HHHHHHHHcCceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccc
Q 004998 132 EIVYAAHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 132 ~aL~yLHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
.||.|||++||+||||||+|||++ .++.+||+|||.+...+.....
T Consensus 131 ~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------- 177 (320)
T 2i6l_A 131 RGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH--------------------------------- 177 (320)
T ss_dssp HHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC---------------------------------------
T ss_pred HHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCccc---------------------------------
Confidence 999999999999999999999997 5678999999887443111000
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCC
Q 004998 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVS 289 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s 289 (720)
........||++|+|||++.+ ..++
T Consensus 178 ------------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~ 203 (320)
T 2i6l_A 178 ------------------------------------------------------KGHLSEGLVTKWYRSPRLLLSPNNYT 203 (320)
T ss_dssp --------------------------------------------------------CCCGGGSCCTTCCHHHHHCTTCCC
T ss_pred ------------------------------------------------------ccccccccccccccCcHHhcCcccCC
Confidence 000011367999999999876 5689
Q ss_pred ccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCC-----------------------C----ccccccC-chHH
Q 004998 290 CASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL-----------------------P----PQLLLKF-PKEA 338 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~-----------------------p----~~~~~~~-p~~~ 338 (720)
.++|||||||++|||++ ||............+..... + ....... +...
T Consensus 204 ~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (320)
T 2i6l_A 204 KAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAV 283 (320)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHH
T ss_pred chhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHH
Confidence 99999999999999999 77665543322222211100 0 0111223 3445
Q ss_pred HHHHHcCCCCCCCCCChHHHHcCcccCCCccch
Q 004998 339 SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSM 371 (720)
Q Consensus 339 ~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~l 371 (720)
+||.+||+.||.+|||+.|+|+||||+....+.
T Consensus 284 ~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p~ 316 (320)
T 2i6l_A 284 DFLEQILTFSPMDRLTAEEALSHPYMSIYSFPM 316 (320)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC--
T ss_pred HHHHHHcCCCccccCCHHHHhCCcccccccCcc
Confidence 999999999999999999999999999764443
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-32 Score=299.54 Aligned_cols=204 Identities=16% Similarity=0.169 Sum_probs=159.0
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHH
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHI 126 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i 126 (720)
..+|..+|.++ +|||||++++ ++.... .+|+|||| .|++|.++|.... ..+++.+++.+
T Consensus 133 ~~~E~~~l~~l~~hpnIv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 208 (370)
T 2psq_A 133 LVSEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208 (370)
T ss_dssp HHHHHHHHHHSCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEeeEEE-EEccCC---CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHH
Confidence 34788889999 8999999999 555443 57999999 8899999995432 34899999999
Q ss_pred HHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004998 127 FRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 127 ~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
+.||+.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 209 ~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~----------------------------- 259 (370)
T 2psq_A 209 TYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYY----------------------------- 259 (370)
T ss_dssp HHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTT-----------------------------
T ss_pred HHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccce-----------------------------
Confidence 999999999999999999999999999999999999999988533211000
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004998 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
.......||+.|+|||++.+.
T Consensus 260 -----------------------------------------------------------~~~~~~~~t~~y~aPE~~~~~ 280 (370)
T 2psq_A 260 -----------------------------------------------------------KKTTNGRLPVKWMAPEALFDR 280 (370)
T ss_dssp -----------------------------------------------------------CTTTTTTSCGGGCCHHHHHTC
T ss_pred -----------------------------------------------------------ecccCCCcccceECHhHhcCC
Confidence 000113568899999999999
Q ss_pred CCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 287 PVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++.++|||||||++|||++ ||...... .....+..+..++......+...+||.+||+.||.+|||+.|+++
T Consensus 281 ~~~~~~DvwslG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~ 357 (370)
T 2psq_A 281 VYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357 (370)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99999999999999999997 56554332 334444444333332233345569999999999999999999986
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-32 Score=285.65 Aligned_cols=206 Identities=18% Similarity=0.268 Sum_probs=157.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++..++||||+++++ ++.... .+|+|||| .+++|.+++.... .+++..++.++.||+.||.|||++||
T Consensus 58 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i 132 (276)
T 2h6d_A 58 IKREIQNLKLFRHPHIIKLYQ-VISTPT---DFFMVMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCHRHMV 132 (276)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHhcCCCCCEeEEEE-EEecCC---eEEEEEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 346778899999999999999 554443 67999999 7899999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.......
T Consensus 133 ~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~----------------------------------------------- 165 (276)
T 2h6d_A 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----------------------------------------------- 165 (276)
T ss_dssp SCCCCCGGGEEECTTSCEEECCCCGGGCCCC-------------------------------------------------
T ss_pred ccCCCChhhEEECCCCCEEEeecccccccCCCc-----------------------------------------------
Confidence 999999999999999999999998874321110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..+ +.++|||||||++
T Consensus 166 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l 201 (276)
T 2h6d_A 166 --------------------------------------------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVIL 201 (276)
T ss_dssp -------------------------------------------------------CCTGGGTTSCCCHHHHHHHHHHHHH
T ss_pred --------------------------------------------ceecccCCccccCHHHHcCCCCCCccchHHHHHHHH
Confidence 0001367999999999988765 6899999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|+|++ ||...... .....+.....+ ++.. .+...+|+.+||+.||.+|||+.|+++||||+...
T Consensus 202 ~~l~~g~~p~~~~~~~-~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~ 269 (276)
T 2h6d_A 202 YALLCGTLPFDDEHVP-TLFKKIRGGVFY--IPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDL 269 (276)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred HHHHhCCCCCCCCcHH-HHHHHhhcCccc--CchhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccCc
Confidence 99999 66654433 344444443321 1122 23455999999999999999999999999998753
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-32 Score=294.14 Aligned_cols=205 Identities=15% Similarity=0.148 Sum_probs=160.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ ++.++. .+|+|||| .|++|.+++......+++.+++.++.||+.||.|||++||
T Consensus 97 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i 172 (325)
T 3kul_A 97 FLSEASIMGQFDHPNIIRLEG-VVTRGR---LAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY 172 (325)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EECGGG---CCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCCcEEE-EEEeCC---ccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 347888999999999999999 555543 56999999 7999999997666679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++......... .+
T Consensus 173 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~~------------ 209 (325)
T 3kul_A 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA-------------------------------AY------------ 209 (325)
T ss_dssp ECSCCSGGGEEECTTCCEEECCCSSCEECC----C-------------------------------CE------------
T ss_pred eCCCCCcceEEECCCCCEEECCCCcccccccCccc-------------------------------ee------------
Confidence 99999999999999999999999988543211000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......+|+.|+|||++.+..++.++|||||||++|
T Consensus 210 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ 245 (325)
T 3kul_A 210 --------------------------------------------TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMW 245 (325)
T ss_dssp --------------------------------------------ECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred --------------------------------------------eccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHH
Confidence 000134688999999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 246 ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~ 306 (325)
T 3kul_A 246 EVLAYGERPYWNMTNR-DVISSVEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306 (325)
T ss_dssp HHHTTSCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHcCCCCCcccCCHH-HHHHHHHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9997 66554443 344444444333333333344569999999999999999999986
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-32 Score=285.47 Aligned_cols=204 Identities=15% Similarity=0.171 Sum_probs=161.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.+.. .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 52 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i 127 (269)
T 4hcu_A 52 FIEEAEVMMKLSHPKLVQLYG-VCLEQA---PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACV 127 (269)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EECSSS---SEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEecCC---ceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 346888999999999999999 554443 57999999 8999999997666679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+........
T Consensus 128 ~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------------------- 161 (269)
T 4hcu_A 128 IHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY---------------------------------------------- 161 (269)
T ss_dssp CCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH----------------------------------------------
T ss_pred ecCCcchheEEEcCCCCEEecccccccccccccc----------------------------------------------
Confidence 9999999999999999999999988743211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
. ......+|+.|+|||++.+..++.++|||||||++|
T Consensus 162 ------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 198 (269)
T 4hcu_A 162 ------------------------T-------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMW 198 (269)
T ss_dssp ------------------------H-------------------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred ------------------------c-------------------cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHH
Confidence 0 000135688899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
+|++ ||...... .....+.....+.......+...+|+.+||+.||.+|||+.+++++
T Consensus 199 ~ll~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 199 EVFSEGKIPYENRSNS-EVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp HHHTTSCCTTTTCCHH-HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHhcCCCCCCCCCCHH-HHHHHHhcCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 9998 56554433 4444454443332222234455699999999999999999999873
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.8e-33 Score=296.98 Aligned_cols=209 Identities=14% Similarity=0.085 Sum_probs=157.1
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+.++|..+|.+++|||||++++.+.........+|+|||| .+++|.+++... .+++..++.++.||+.||.|||+.
T Consensus 63 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH~~ 140 (322)
T 3soc_A 63 WQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHED 140 (322)
T ss_dssp HHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhh
Confidence 34556888999999999999999444434334468999999 889999999654 399999999999999999999999
Q ss_pred ----------CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccc
Q 004998 141 ----------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 141 ----------gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
||+||||||+|||++.++.+||+|||++.........
T Consensus 141 ~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~--------------------------------- 187 (322)
T 3soc_A 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSA--------------------------------- 187 (322)
T ss_dssp EEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCC---------------------------------
T ss_pred ccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCc---------------------------------
Confidence 9999999999999999999999999887432111000
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC----
Q 004998 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---- 286 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---- 286 (720)
.......||+.|+|||++.+.
T Consensus 188 -------------------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ 212 (322)
T 3soc_A 188 -------------------------------------------------------GDTHGQVGTRRYMAPEVLEGAINFQ 212 (322)
T ss_dssp -------------------------------------------------------CCCTTCCCCGGGCCHHHHTTCCCCC
T ss_pred -------------------------------------------------------cccccCccCccccCHhhcccccccC
Confidence 000114689999999999873
Q ss_pred -CCCccccchhhhhhhhhccc---cCCCCc---------------hHHHHHHHhhcCCCCccccccC------chHHHHH
Q 004998 287 -PVSCASDIYRLGVLLFELFC---PFSTGE---------------EKTRTMSSLRHRVLPPQLLLKF------PKEASFC 341 (720)
Q Consensus 287 -~~s~~sDIwSLGvll~eLlt---pf~~~~---------------~~~~~~~~l~~~~~p~~~~~~~------p~~~~li 341 (720)
.++.++|||||||++|||++ ||.... ........+......+.+...+ +...+||
T Consensus 213 ~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 292 (322)
T 3soc_A 213 RDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETI 292 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHH
T ss_pred cCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHH
Confidence 36778999999999999999 564321 1122222233333333332222 2255999
Q ss_pred HHcCCCCCCCCCChHHHHc
Q 004998 342 LWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 342 ~~~L~~dP~~Rpta~eiL~ 360 (720)
.+||+.||.+|||+.|+++
T Consensus 293 ~~cl~~dP~~Rps~~ell~ 311 (322)
T 3soc_A 293 EECWDHDAEARLSAGCVGE 311 (322)
T ss_dssp HHHTCSSGGGSCCHHHHHH
T ss_pred HHHccCChhhCcCHHHHHH
Confidence 9999999999999999985
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-32 Score=287.12 Aligned_cols=207 Identities=15% Similarity=0.198 Sum_probs=161.8
Q ss_pred eehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.++. ||||+++++ ++.... .+|+|||| .+++|.+++... ..+++..++.++.||+.||.|||++||
T Consensus 71 ~~e~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i 145 (298)
T 1phk_A 71 LKEVDILRKVSGHPNIIQLKD-TYETNT---FFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALHKLNI 145 (298)
T ss_dssp HHHHHHHHHHTTCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCEeeeee-eeccCC---eEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 36777888885 999999999 555443 68999999 789999999554 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.......
T Consensus 146 ~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~----------------------------------------------- 178 (298)
T 1phk_A 146 VHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE----------------------------------------------- 178 (298)
T ss_dssp ECSCCSGGGEEECTTCCEEECCCTTCEECCTTC-----------------------------------------------
T ss_pred ccCCCCcceEEEcCCCcEEEecccchhhcCCCc-----------------------------------------------
Confidence 999999999999999999999998874321110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc------CCCCCccccchh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA------GAPVSCASDIYR 296 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~------~~~~s~~sDIwS 296 (720)
......||+.|+|||++. ...++.++||||
T Consensus 179 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~s 214 (298)
T 1phk_A 179 --------------------------------------------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214 (298)
T ss_dssp --------------------------------------------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHH
T ss_pred --------------------------------------------ccccccCCccccCHHHhccccccccccCCcccccHh
Confidence 001136799999999985 445899999999
Q ss_pred hhhhhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|||++|+|++ ||...... .....+.... ++......+ +...+|+.+||+.||.+|||+.|+|+||||++..
T Consensus 215 lG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~ 291 (298)
T 1phk_A 215 TGVIMYTLLAGSPPFWHRKQM-LMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV 291 (298)
T ss_dssp HHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred HHHHHHHHHHCCCCCcCccHH-HHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence 9999999999 66655443 2333333322 222222333 4455999999999999999999999999999763
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-32 Score=284.78 Aligned_cols=198 Identities=14% Similarity=0.188 Sum_probs=156.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG- 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g- 141 (720)
..+|..++.+++||||+++++ ++.+.. ++|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 70 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~-----~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ 143 (287)
T 4f0f_A 70 FQREVFIMSNLNHPNIVKLYG-LMHNPP-----RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNP 143 (287)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EETTTT-----EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHhCCCCCchhhhe-eecCCC-----eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCC
Confidence 347888999999999999999 554442 799999 889999999776667999999999999999999999999
Q ss_pred -ceeccCCCCcEEEccCCc-----eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 142 -IVVHNVRPSCFVMSSFNH-----VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 142 -IvHrDLKP~NILl~~~~~-----vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|+||||||+|||++.++. +||+|||.+......
T Consensus 144 ~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~----------------------------------------- 182 (287)
T 4f0f_A 144 PIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS----------------------------------------- 182 (287)
T ss_dssp CCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSC-----------------------------------------
T ss_pred CeecCCCCcceEEEeccCCCCceeEEeCCCCcccccccc-----------------------------------------
Confidence 999999999999987776 999888877321100
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc--CCCCCcccc
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA--GAPVSCASD 293 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~--~~~~s~~sD 293 (720)
.....||+.|+|||++. ...++.++|
T Consensus 183 ----------------------------------------------------~~~~~g~~~y~aPE~~~~~~~~~~~~~D 210 (287)
T 4f0f_A 183 ----------------------------------------------------VSGLLGNFQWMAPETIGAEEESYTEKAD 210 (287)
T ss_dssp ----------------------------------------------------EECCCCCCTTSCGGGSSCSSCEECHHHH
T ss_pred ----------------------------------------------------ccccCCCccccCchhhccCCCCcCchhh
Confidence 01146899999999994 344789999
Q ss_pred chhhhhhhhhccc---cCCCCchH-HHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 294 IYRLGVLLFELFC---PFSTGEEK-TRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~-~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||||++|||++ ||...... ......+.....++.+...++. ..+|+.+||+.||.+|||+.++++
T Consensus 211 i~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 282 (287)
T 4f0f_A 211 TYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282 (287)
T ss_dssp HHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 9999999999999 67654322 2223333334444444444444 459999999999999999999986
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-32 Score=288.41 Aligned_cols=203 Identities=18% Similarity=0.169 Sum_probs=152.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++... .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 62 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 136 (281)
T 1mp8_A 62 KFLQEALTMRQFDHPHIVKLIG-VITEN----PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 136 (281)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECSS----SCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCccceEEE-EEccC----ccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 44332 46899999 888999999666556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++.........
T Consensus 137 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 172 (281)
T 1mp8_A 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY-------------------------------------------- 172 (281)
T ss_dssp CCCSCCSGGGEEEEETTEEEECC---------------------------------------------------------
T ss_pred eecccccHHHEEECCCCCEEECccccccccCccccc--------------------------------------------
Confidence 999999999999999999999999887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 173 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 207 (281)
T 1mp8_A 173 ---------------------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 207 (281)
T ss_dssp ---------------------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccCCCcccccChhhcccCCCCCccCchHHHHHH
Confidence 00012467899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 208 ~ell~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 269 (281)
T 1mp8_A 208 WEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 269 (281)
T ss_dssp HHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhcCCCCCCcCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99996 66654433 233334433333322233344559999999999999999999985
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-32 Score=291.80 Aligned_cols=205 Identities=15% Similarity=0.172 Sum_probs=155.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~--~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
.+|..+|.+++||||+++++ ++.... ...+|+|||| .+++|.+++.... ..+++.+++.++.||+.||.|||++|
T Consensus 55 ~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ 132 (319)
T 4euu_A 55 MREFEVLKKLNHKNIVKLFA-IEEETT-TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132 (319)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECTT-TCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCcceEEE-EeecCC-CceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 47888999999999999999 444332 2367999999 7899999995432 23899999999999999999999999
Q ss_pred ceeccCCCCcEEE----ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 142 IVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 142 IvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|+||||||+|||+ +..+.+||+|||++.......
T Consensus 133 ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~------------------------------------------ 170 (319)
T 4euu_A 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE------------------------------------------ 170 (319)
T ss_dssp EECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC------------------------------------------
T ss_pred EecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCC------------------------------------------
Confidence 9999999999999 677789999888874321110
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc--------CCCCC
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA--------GAPVS 289 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~--------~~~~s 289 (720)
......||+.|+|||++. +..++
T Consensus 171 -------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~ 201 (319)
T 4euu_A 171 -------------------------------------------------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYG 201 (319)
T ss_dssp -------------------------------------------------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBC
T ss_pred -------------------------------------------------ceeecccCCCccCHHHhhhccccccccCCCC
Confidence 001146899999999986 46689
Q ss_pred ccccchhhhhhhhhccc---cCCCC---chHHHHHHHhhcCCCCc-----------------------cccccCc-hHHH
Q 004998 290 CASDIYRLGVLLFELFC---PFSTG---EEKTRTMSSLRHRVLPP-----------------------QLLLKFP-KEAS 339 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~---~~~~~~~~~l~~~~~p~-----------------------~~~~~~p-~~~~ 339 (720)
.++|||||||++|||++ ||.+. ......+..+..+..+. .+....+ ...+
T Consensus 202 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 281 (319)
T 4euu_A 202 ATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTP 281 (319)
T ss_dssp TTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHH
Confidence 99999999999999999 66432 22223333333322211 0111112 2348
Q ss_pred HHHHcCCCCCCCCCChHHHHcCc
Q 004998 340 FCLWLLHPEPSGRPKMGELLQSE 362 (720)
Q Consensus 340 li~~~L~~dP~~Rpta~eiL~hp 362 (720)
|+.+||++||++|||+.|+|+||
T Consensus 282 ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 282 VLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp HHHHHSCCCTTTSCCHHHHHHHH
T ss_pred HHHHhccCChhhhccHHHhhhcc
Confidence 99999999999999999999987
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-33 Score=300.16 Aligned_cols=206 Identities=16% Similarity=0.242 Sum_probs=137.7
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCceeccC
Q 004998 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNV 147 (720)
Q Consensus 70 ~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDL 147 (720)
.+..+.||||+++++.+.........+|+|||| .|++|.+++... ...+++.+++.++.||+.||.|||++||+||||
T Consensus 75 ~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dl 154 (336)
T 3fhr_A 75 HWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDV 154 (336)
T ss_dssp HHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred HHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 456689999999999433323223458999999 788999999554 346999999999999999999999999999999
Q ss_pred CCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 148 RPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 148 KP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||+|||++. ++.+||+|||++.......
T Consensus 155 kp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------- 185 (336)
T 3fhr_A 155 KPENLLYTSKEKDAVLKLTDFGFAKETTQNA------------------------------------------------- 185 (336)
T ss_dssp SGGGEEESCSSTTCCEEECCCTTCEEC-----------------------------------------------------
T ss_pred CHHHEEEEecCCCceEEEeccccceeccccc-------------------------------------------------
Confidence 999999986 4459999888773221100
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
.....||+.|+|||++.+..++.++|||||||++|+|
T Consensus 186 -------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l 222 (336)
T 3fhr_A 186 -------------------------------------------LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL 222 (336)
T ss_dssp -------------------------------------------------------------CHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHH
Confidence 0013679999999999888899999999999999999
Q ss_pred cc---cCCCCchHHH---HHHHhhc--CCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 305 FC---PFSTGEEKTR---TMSSLRH--RVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 305 lt---pf~~~~~~~~---~~~~l~~--~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
++ ||........ ....+.. ..++......+ +...+||.+||++||.+|||+.|+|+||||+..
T Consensus 223 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 294 (336)
T 3fhr_A 223 LCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS 294 (336)
T ss_dssp HHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred HHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence 99 5544322111 0111111 12222222333 444599999999999999999999999999875
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-33 Score=295.03 Aligned_cols=215 Identities=14% Similarity=0.157 Sum_probs=156.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.++. .+++|||| .|++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 53 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ 128 (310)
T 3s95_A 53 TFLKEVKVMRCLEHPNVLKFIG-VLYKDK---RLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMN 128 (310)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcCcccEEE-EEecCC---eeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 554443 58999999 899999999765666999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+........... +....
T Consensus 129 ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~-------------------------------~~~~~------ 171 (310)
T 3s95_A 129 IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE-------------------------------GLRSL------ 171 (310)
T ss_dssp EECSCCSTTSEEECTTSCEEECCCTTCEECC-------------------------------------------------
T ss_pred ccCCCCCcCeEEECCCCCEEEeecccceeccccccccc-------------------------------ccccc------
Confidence 99999999999999999999999998854422210000 00000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
............||+.|+|||++.+..++.++|||||||++
T Consensus 172 ---------------------------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l 212 (310)
T 3s95_A 172 ---------------------------------------KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVL 212 (310)
T ss_dssp -----------------------------------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHH
T ss_pred ---------------------------------------cccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHH
Confidence 00000001125799999999999999999999999999999
Q ss_pred hhccc---cCCCCchHH----HHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC---PFSTGEEKT----RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~----~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||....... ...........++. ..+...+|+.+||+.||.+|||+.++++
T Consensus 213 ~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 213 CEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPN---CPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp HHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCCTT---CCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhcCCCCCcchhhhHHHHhhhhhccccccCCCC---CCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99998 443221100 00001111111221 2244569999999999999999999986
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-32 Score=283.26 Aligned_cols=203 Identities=15% Similarity=0.172 Sum_probs=159.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.+.. .+++|||| .+++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 51 ~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~ 126 (268)
T 3sxs_A 51 FQEAQTMMKLSHPKLVKFYG-VCSKEY---PIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFI 126 (268)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECSSS---SEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEccCC---ceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 46778999999999999999 554443 57999999 79999999966555699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+.........
T Consensus 127 H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~---------------------------------------------- 160 (268)
T 3sxs_A 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV---------------------------------------------- 160 (268)
T ss_dssp ESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE----------------------------------------------
T ss_pred cCCcCcceEEECCCCCEEEccCccceecchhhhh----------------------------------------------
Confidence 9999999999999999999999887432111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......+|+.|+|||++.+..++.++|||||||++||
T Consensus 161 -------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 197 (268)
T 3sxs_A 161 -------------------------------------------SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWE 197 (268)
T ss_dssp -------------------------------------------ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHH
Confidence 0001346788999999998889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|++ ||....... ....+.....+.......+...+|+.+||+.||.+|||+.+++++
T Consensus 198 l~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 198 VFSLGKMPYDLYTNSE-VVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp HHTTTCCTTTTSCHHH-HHHHHHTTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHcCCCCCccccChHH-HHHHHHcCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 997 666554443 333333332222222233445699999999999999999999973
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-32 Score=297.19 Aligned_cols=208 Identities=20% Similarity=0.224 Sum_probs=161.1
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC------------------------
Q 004998 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR------------------------ 116 (720)
Q Consensus 63 r~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~------------------------ 116 (720)
+..+|..+|.++ +|||||++++ ++.... ..+++|||| .|++|.+++.....
T Consensus 71 ~~~~E~~~l~~l~~hpniv~~~~-~~~~~~--~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (359)
T 3vhe_A 71 ALMSELKILIHIGHHLNVVNLLG-ACTKPG--GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPV 147 (359)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSTT--SCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------
T ss_pred HHHHHHHHHHhhcCCcceeeeee-eeecCC--CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccch
Confidence 344788889998 8999999999 444432 247999999 89999999954322
Q ss_pred -----------------------------------------CCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEc
Q 004998 117 -----------------------------------------SVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMS 155 (720)
Q Consensus 117 -----------------------------------------~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~ 155 (720)
.+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~ 227 (359)
T 3vhe_A 148 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 227 (359)
T ss_dssp ------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred hhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc
Confidence 289999999999999999999999999999999999999
Q ss_pred cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCccccc
Q 004998 156 SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTH 235 (720)
Q Consensus 156 ~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~ 235 (720)
.++.+||+|||++....... +.
T Consensus 228 ~~~~~kl~Dfg~a~~~~~~~---------------------------------~~------------------------- 249 (359)
T 3vhe_A 228 EKNVVKICDFGLARDIYKDP---------------------------------DY------------------------- 249 (359)
T ss_dssp GGGCEEECCCGGGSCTTSCT---------------------------------TC-------------------------
T ss_pred CCCcEEEEeccceeeecccc---------------------------------cc-------------------------
Confidence 99999999998884331110 00
Q ss_pred cccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhccc----cCCCC
Q 004998 236 VVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTG 311 (720)
Q Consensus 236 ~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~ 311 (720)
.......||+.|+|||++.+..++.++|||||||++|||++ ||...
T Consensus 250 ------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 299 (359)
T 3vhe_A 250 ------------------------------VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV 299 (359)
T ss_dssp ------------------------------EEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTC
T ss_pred ------------------------------hhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCcc
Confidence 00011467999999999998889999999999999999997 66655
Q ss_pred chHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 312 EEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 312 ~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
.........+.....++......+...+|+.+||++||.+|||+.|+++|
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 300 KIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp CCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred chhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 44444444555443333333334556699999999999999999999873
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-32 Score=290.40 Aligned_cols=209 Identities=16% Similarity=0.100 Sum_probs=155.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++.++..+. ..+++|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 57 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 134 (295)
T 3ugc_A 57 DFEREIEILKSLQHDNIVKYKGVCYSAGR--RNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 134 (295)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEECHHHH--TSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEEEEecCCC--CceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCC
Confidence 34478889999999999999994333221 247999999 799999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++...+..... +
T Consensus 135 ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 171 (295)
T 3ugc_A 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF--------------------------------F----------- 171 (295)
T ss_dssp CCCSCCSGGGEEEEETTEEEECCCCSCC----------------------------------------------------
T ss_pred cccCCCCHhhEEEcCCCeEEEccCcccccccCCcce--------------------------------e-----------
Confidence 999999999999999999999999988543211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 172 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l 207 (295)
T 3ugc_A 172 --------------------------------------------KVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 207 (295)
T ss_dssp ------------------------------------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------eeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHH
Confidence 000113567889999999988899999999999999
Q ss_pred hhcccc---CCCCchH---------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFCP---FSTGEEK---------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLltp---f~~~~~~---------------~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||+++ |...... ......+.....++......+...+|+.+||+.||.+|||+.|+++
T Consensus 208 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~ 284 (295)
T 3ugc_A 208 YELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 284 (295)
T ss_dssp HHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 999993 3221110 0122222222222222223344559999999999999999999985
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-32 Score=286.43 Aligned_cols=207 Identities=18% Similarity=0.197 Sum_probs=161.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+|++||| .+++|.+++.... .+++.+++.++.||+.||.|||++|
T Consensus 67 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ 141 (287)
T 2wei_A 67 TILREVELLKKLDHPNIMKLFE-ILEDSS---SFYIVGELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMHKHN 141 (287)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhccCCCccEEEE-EEeCCC---eEEEEEEccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447788999999999999999 554443 67999999 8999999985433 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccC---CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVMSSF---NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~~---~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+||+++.+ +.+||+|||.+.......
T Consensus 142 i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~------------------------------------------- 178 (287)
T 2wei_A 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT------------------------------------------- 178 (287)
T ss_dssp CCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS-------------------------------------------
T ss_pred eeccCCChhhEEEecCCCcccEEEeccCcceeecCCC-------------------------------------------
Confidence 9999999999999754 469998888774321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+. ++.++||||||
T Consensus 179 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG 209 (287)
T 2wei_A 179 ------------------------------------------------KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAG 209 (287)
T ss_dssp ------------------------------------------------SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHH
T ss_pred ------------------------------------------------ccccccCcccccChHHhcCC-CCCchhhHhHH
Confidence 00013578999999999765 89999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCcc---ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|+|++ ||...... .....+..+..+.. .....+...+||.+||++||.+|||+.|+|+||||++.
T Consensus 210 ~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 210 VILYILLSGTPPFYGKNEY-DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 99999999 66655443 34444444433222 22233445699999999999999999999999999764
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-32 Score=297.32 Aligned_cols=205 Identities=19% Similarity=0.227 Sum_probs=153.7
Q ss_pred ehhhhcccCC-CC-----CceecccceeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGD-HL-----RNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~Ls~l~-Hp-----nIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+|..++..+. |+ +|+++++ ++.... .+|+||||.+++|.+++... ...+++..++.++.||+.||.|||
T Consensus 99 ~e~~~l~~l~~~~~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH 174 (382)
T 2vx3_A 99 IEVRLLELMNKHDTEMKYYIVHLKR-HFMFRN---HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLA 174 (382)
T ss_dssp HHHHHHHHHHHCSSGGGGGBCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcccccceeEEEeee-eeccCC---ceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 4555666554 44 4888888 444443 68999999777999999543 345999999999999999999999
Q ss_pred --HcCceeccCCCCcEEEc--cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 139 --SQGIVVHNVRPSCFVMS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 139 --s~gIvHrDLKP~NILl~--~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
..|||||||||+|||++ .++.+||+|||++...+..
T Consensus 175 ~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~---------------------------------------- 214 (382)
T 2vx3_A 175 TPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR---------------------------------------- 214 (382)
T ss_dssp STTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC----------------------------------------
T ss_pred cCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccc----------------------------------------
Confidence 57999999999999995 4778999988887432111
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDI 294 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDI 294 (720)
....+||+.|+|||++.+..++.++||
T Consensus 215 -----------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di 241 (382)
T 2vx3_A 215 -----------------------------------------------------IYQYIQSRFYRSPEVLLGMPYDLAIDM 241 (382)
T ss_dssp -----------------------------------------------------CCSSCSCGGGCCHHHHTTCCCCTHHHH
T ss_pred -----------------------------------------------------cccccCCccccChHHHcCCCCCcHHHH
Confidence 011468999999999999999999999
Q ss_pred hhhhhhhhhccc---cCCCCchHHHHHHHhhc-CCCCcccccc-------------------------------------
Q 004998 295 YRLGVLLFELFC---PFSTGEEKTRTMSSLRH-RVLPPQLLLK------------------------------------- 333 (720)
Q Consensus 295 wSLGvll~eLlt---pf~~~~~~~~~~~~l~~-~~~p~~~~~~------------------------------------- 333 (720)
|||||++|||++ ||............+.. +..++.....
T Consensus 242 wSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 321 (382)
T 2vx3_A 242 WSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLH 321 (382)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHH
Confidence 999999999999 77765544332222221 1111110000
Q ss_pred ------------------------CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 334 ------------------------FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 334 ------------------------~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
.+...+||.+||++||++|||+.|+|+||||+..
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~ 379 (382)
T 2vx3_A 322 NILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT 379 (382)
T ss_dssp HHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred HHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence 0134699999999999999999999999999875
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=283.50 Aligned_cols=214 Identities=16% Similarity=0.188 Sum_probs=162.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++.++ .. ....+|+||||..++|.+++.. ....+++..++.++.||+.||.|||++||
T Consensus 53 ~~~E~~~l~~l~h~~i~~~~~~~~-~~-~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i 130 (305)
T 2wtk_C 53 VKKEIQLLRRLRHKNVIQLVDVLY-NE-EKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGI 130 (305)
T ss_dssp HHHHHHHHTTCCCTTBCCEEEEEE-CC----CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCeeEEEEEEE-cC-CCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 347788999999999999999433 22 2236899999955668888843 34569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||+++.++.++|+|||.+.........
T Consensus 131 ~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------------------- 165 (305)
T 2wtk_C 131 VHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD--------------------------------------------- 165 (305)
T ss_dssp ECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSS---------------------------------------------
T ss_pred eecCCCcccEEEcCCCcEEeeccccccccCccccc---------------------------------------------
Confidence 99999999999999999999999887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC--CCccccchhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLGVL 300 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwSLGvl 300 (720)
.......||+.|+|||++.+.. ++.++|||||||+
T Consensus 166 -------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~i 202 (305)
T 2wtk_C 166 -------------------------------------------DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVT 202 (305)
T ss_dssp -------------------------------------------CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCCCCCCcChhhccCcccCCcchhhHHHHHHH
Confidence 0001136899999999998754 4789999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+|||++ ||...... .....+.....+ ......+...+||.+||+.||.+|||+.|+++||||+....
T Consensus 203 l~~l~~g~~p~~~~~~~-~~~~~i~~~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 203 LYNITTGLYPFEGDNIY-KLFENIGKGSYA-IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272 (305)
T ss_dssp HHHHHHSSCSCCCSSHH-HHHHHHHHCCCC-CCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred HHHHHhCCCCCCCchHH-HHHHHHhcCCCC-CCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence 999999 67654433 344444443221 11122344559999999999999999999999999987644
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-32 Score=293.20 Aligned_cols=204 Identities=15% Similarity=0.117 Sum_probs=159.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++++++||||+++++ ++... ..++++|| .+++|.+++......+++..++.|+.||+.||.|||++|
T Consensus 63 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~----~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 137 (327)
T 3poz_A 63 EILDEAYVMASVDNPHVCRLLG-ICLTS----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137 (327)
T ss_dssp HHHHHHHHHHHCCBTTBCCEEE-EEESS----SEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeEEEE-EEecC----CeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 3447888999999999999999 55543 36788888 999999999766666999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++..+.....
T Consensus 138 ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------------------- 173 (327)
T 3poz_A 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-------------------------------------------- 173 (327)
T ss_dssp CCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC---------------------------------------------
T ss_pred eeCCCCChheEEECCCCCEEEccCcceeEccCCccc--------------------------------------------
Confidence 999999999999999999999999887432211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 174 --------------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il 209 (327)
T 3poz_A 174 --------------------------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 209 (327)
T ss_dssp --------------------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccCCCccccccChHHhccCCCCchhhhhhhHHHH
Confidence 000113568899999999999999999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+||++.++++
T Consensus 210 ~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~ 271 (327)
T 3poz_A 210 WELMTFGSKPYDGIPAS-EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELII 271 (327)
T ss_dssp HHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHH
T ss_pred HHHHhcCCCCccCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99998 56554332 233334433333333334455669999999999999999999986
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-32 Score=284.24 Aligned_cols=203 Identities=16% Similarity=0.207 Sum_probs=160.0
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.+.. .+|+|||| .+++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 67 ~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~ 142 (283)
T 3gen_A 67 IEEAKVMMNLSHEKLVQLYG-VCTKQR---PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFL 142 (283)
T ss_dssp HHHHHHHHTCCCTTBCCEEE-EECSSS---SEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCCCCCEeeEEE-EEecCC---CeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 36788999999999999999 554443 57999999 79999999976555699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+........
T Consensus 143 H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~----------------------------------------------- 175 (283)
T 3gen_A 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY----------------------------------------------- 175 (283)
T ss_dssp CSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH-----------------------------------------------
T ss_pred CCCCccceEEEcCCCCEEEcccccccccccccc-----------------------------------------------
Confidence 999999999999999999999988743211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
. ......+|+.|+|||++.+..++.++|||||||++||
T Consensus 176 -----------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~ 213 (283)
T 3gen_A 176 -----------------------T-------------------SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE 213 (283)
T ss_dssp -----------------------H-------------------STTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHH
T ss_pred -----------------------c-------------------cccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHH
Confidence 0 0001346888999999998889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|++ ||...... .....+.....+.......+...+|+.+||+.||.+|||+.++++|
T Consensus 214 l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 274 (283)
T 3gen_A 214 IYSLGKMPYERFTNS-ETAEHIAQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 274 (283)
T ss_dssp HHTTTCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHhCCCCCccccChh-HHHHHHhcccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 997 66655443 3344444433222222233455699999999999999999999863
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-32 Score=282.73 Aligned_cols=199 Identities=17% Similarity=0.213 Sum_probs=153.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC-
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG- 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g- 141 (720)
..+|..++..++||||+++++ ++.... .+|+|||| .|++|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 53 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~~ 126 (271)
T 3dtc_A 53 VRQEAKLFAMLKHPNIIALRG-VCLKEP---NLCLVMEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLHDEAI 126 (271)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECCC-----CEEEEECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHhcCCCCEeeEEE-EEecCC---ceEEEEEcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCC
Confidence 346778899999999999999 555443 46999999 89999999953 34999999999999999999999999
Q ss_pred --ceeccCCCCcEEEcc--------CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccc
Q 004998 142 --IVVHNVRPSCFVMSS--------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQ 211 (720)
Q Consensus 142 --IvHrDLKP~NILl~~--------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfg 211 (720)
|+||||||+|||++. ++.++|+|||.+.......
T Consensus 127 ~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------------------------------------ 170 (271)
T 3dtc_A 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT------------------------------------ 170 (271)
T ss_dssp SCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--------------------------------------------
T ss_pred CceeecCCchHHEEEecccccccccCcceEEccCCccccccccc------------------------------------
Confidence 899999999999985 6789998888773321100
Q ss_pred cccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcc
Q 004998 212 LVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA 291 (720)
Q Consensus 212 la~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~ 291 (720)
.....||+.|+|||++.+..++.+
T Consensus 171 --------------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~ 194 (271)
T 3dtc_A 171 --------------------------------------------------------KMSAAGAYAWMAPEVIRASMFSKG 194 (271)
T ss_dssp -------------------------------------------------------------CCGGGSCHHHHHHCCCSHH
T ss_pred --------------------------------------------------------ccCCCCccceeCHHHhccCCCCch
Confidence 001367999999999998889999
Q ss_pred ccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
+|||||||++|+|++ ||............... .........++ ...+|+.+||+.||.+|||+.|++++
T Consensus 195 ~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 267 (271)
T 3dtc_A 195 SDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMN-KLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ 267 (271)
T ss_dssp HHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTS-CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcC-CCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 999999999999999 77665554333333333 33333334444 45599999999999999999999863
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.4e-32 Score=292.29 Aligned_cols=204 Identities=15% Similarity=0.191 Sum_probs=151.3
Q ss_pred ehhhhcccCCCCC------ceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGDHLR------NQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 66 ~e~~~Ls~l~Hpn------IV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+|..++.++.|++ |+.+++ ++.... .+|+||||.+++|.+++.. ....+++.+++.++.||+.||.|||
T Consensus 65 ~E~~~l~~l~~~~~~~~~~~~~~~~-~~~~~~---~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH 140 (355)
T 2eu9_A 65 LEINVLKKIKEKDKENKFLCVLMSD-WFNFHG---HMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH 140 (355)
T ss_dssp HHHHHHHHHHHHCTTSCSCBCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCceeEEEeee-eeeeCC---eEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 5666777777666 888888 454443 6899999988888888844 3356999999999999999999999
Q ss_pred HcCceeccCCCCcEEEc-------------------cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhH
Q 004998 139 SQGIVVHNVRPSCFVMS-------------------SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 199 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~-------------------~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (720)
++||+||||||+|||+. .++.+||+|||++
T Consensus 141 ~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~------------------------------- 189 (355)
T 2eu9_A 141 ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA------------------------------- 189 (355)
T ss_dssp TTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTC-------------------------------
T ss_pred HCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCcc-------------------------------
Confidence 99999999999999994 4455666555554
Q ss_pred hhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccC
Q 004998 200 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 279 (720)
Q Consensus 200 ~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 279 (720)
+..... .....||+.|+|
T Consensus 190 --------------~~~~~~------------------------------------------------~~~~~gt~~y~a 207 (355)
T 2eu9_A 190 --------------TFDHEH------------------------------------------------HTTIVATRHYRP 207 (355)
T ss_dssp --------------EETTSC------------------------------------------------CCSSCSCGGGCC
T ss_pred --------------cccccc------------------------------------------------ccCCcCCCcccC
Confidence 211000 011468999999
Q ss_pred CccccCCCCCccccchhhhhhhhhccc---cCCCCchHHH--HHHHhhcCCCCccccc----------------------
Q 004998 280 PEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTR--TMSSLRHRVLPPQLLL---------------------- 332 (720)
Q Consensus 280 PE~l~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~--~~~~l~~~~~p~~~~~---------------------- 332 (720)
||++.+..++.++|||||||++|||++ ||........ .+..+. +.+|..+..
T Consensus 208 PE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (355)
T 2eu9_A 208 PEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKIL-GPIPSHMIHRTRKQKYFYKGGLVWDENSSDG 286 (355)
T ss_dssp HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHH-CCCCHHHHHHCSCGGGEETTEECCCTTSHHH
T ss_pred CeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc-CCCcHHHhhhccchhhhcccccccccccchh
Confidence 999999889999999999999999999 6665543321 111211 222221100
Q ss_pred -------------------cCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 333 -------------------KFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 333 -------------------~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
..+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 340 (355)
T 2eu9_A 287 RYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 340 (355)
T ss_dssp HHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGC
T ss_pred ccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCC
Confidence 01234599999999999999999999999999986
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-32 Score=298.46 Aligned_cols=212 Identities=10% Similarity=0.086 Sum_probs=155.9
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
.+...+..++||||+++++.+..........|+||||.|++|.+++......+++.+++.|+.||+.||.|||++||+||
T Consensus 97 ~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHr 176 (364)
T 3op5_A 97 QKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHG 176 (364)
T ss_dssp HHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred HHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEe
Confidence 34456788999999999995555444344689999999999999997665679999999999999999999999999999
Q ss_pred cCCCCcEEEc--cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 146 NVRPSCFVMS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 146 DLKP~NILl~--~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|||++ .++.+||+|||+++........ ..+
T Consensus 177 Dlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~------------------------------~~~------------- 213 (364)
T 3op5_A 177 DIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVH------------------------------KAY------------- 213 (364)
T ss_dssp CCCGGGEEEESSCTTCEEECCCTTCEESSGGGCC------------------------------CCS-------------
T ss_pred cCCHHHEEEecCCCCeEEEEECCcceecccCCcc------------------------------ccc-------------
Confidence 9999999999 8899999999988543211000 000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.........||+.|+|||++.+..++.++|||||||++||
T Consensus 214 ----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~e 253 (364)
T 3op5_A 214 ----------------------------------------AADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQ 253 (364)
T ss_dssp ----------------------------------------SCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------ccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHH
Confidence 0000012468999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhc---CCCCccc-----cccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC---PFSTGEEKTRTMSSLRH---RVLPPQL-----LLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~---~~~p~~~-----~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||............... ..++..+ ...+| ...+|+.+||+.||.+||++.+|++
T Consensus 254 l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 254 WLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD 322 (364)
T ss_dssp HHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 999 66542111111111110 0111100 02233 4459999999999999999999875
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-32 Score=290.30 Aligned_cols=206 Identities=16% Similarity=0.185 Sum_probs=153.5
Q ss_pred hhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc-Cceec
Q 004998 67 DGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVVH 145 (720)
Q Consensus 67 e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~-gIvHr 145 (720)
+..++..++||||+++++ ++.... .+|+||||.++.+..++......+++..++.++.||+.||.|||++ ||+||
T Consensus 74 ~~~~~~~~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~ 149 (318)
T 2dyl_A 74 LDVVLKSHDCPYIVQCFG-TFITNT---DVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHR 149 (318)
T ss_dssp HHHHHHTTTCTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred HHHHHHhcCCCceeeEEE-EEecCC---cEEEEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeC
Confidence 334677899999999999 554443 6899999987777776654445699999999999999999999995 99999
Q ss_pred cCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccccc
Q 004998 146 NVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASC 225 (720)
Q Consensus 146 DLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~ 225 (720)
||||+||+++.++.+||+|||.+.......
T Consensus 150 dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-------------------------------------------------- 179 (318)
T 2dyl_A 150 DVKPSNILLDERGQIKLCDFGISGRLVDDK-------------------------------------------------- 179 (318)
T ss_dssp CCCGGGEEECTTSCEEECCCTTC---------------------------------------------------------
T ss_pred CCCHHHEEECCCCCEEEEECCCchhccCCc--------------------------------------------------
Confidence 999999999999999999998873321100
Q ss_pred ccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-----CCCCCccccchhhhhh
Q 004998 226 MQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYRLGVL 300 (720)
Q Consensus 226 ~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++. +..++.++|||||||+
T Consensus 180 -----------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~i 218 (318)
T 2dyl_A 180 -----------------------------------------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGIS 218 (318)
T ss_dssp ------------------------------------------------CCTTCCHHHHC--------CCTHHHHHHHHHH
T ss_pred -----------------------------------------cccccCCCccccChhhcccccccccCCccccchhhHHHH
Confidence 000136799999999995 4458999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCcc--ccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQ--LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~--~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||.........+..+.....+.. .....+...+||.+||+.||.+||++.++++||||+..
T Consensus 219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (318)
T 2dyl_A 219 LVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY 290 (318)
T ss_dssp HHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred HHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence 999999 77654444344444443322211 11223455699999999999999999999999999754
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-32 Score=291.43 Aligned_cols=202 Identities=15% Similarity=0.142 Sum_probs=158.6
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004998 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+..+|..+|.++ +||||+++++ ++.+.. .+|+|||| .+++|.+++.... ..+++.+++.
T Consensus 71 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (327)
T 1fvr_A 71 DFAGELEVLCKLGHHPNIINLLG-ACEHRG---YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 146 (327)
T ss_dssp HHHHHHHHHTTCCCCTTBCCEEE-EEEETT---EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHH
T ss_pred HHHHHHHHHHhccCCCchhhhce-eeeeCC---ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHH
Confidence 344688899999 9999999999 555443 68999999 7999999996543 3699999999
Q ss_pred HHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcc
Q 004998 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 147 i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~~------------------------------ 196 (327)
T 1fvr_A 147 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV------------------------------ 196 (327)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEEC------------------------------
T ss_pred HHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCccccccc------------------------------
Confidence 99999999999999999999999999999999999999998873210000
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC
Q 004998 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
......+|+.|+|||++.+
T Consensus 197 -------------------------------------------------------------~~~~~~~~~~y~aPE~~~~ 215 (327)
T 1fvr_A 197 -------------------------------------------------------------KKTMGRLPVRWMAIESLNY 215 (327)
T ss_dssp -------------------------------------------------------------CC----CCTTTCCHHHHHH
T ss_pred -------------------------------------------------------------cccCCCCCccccChhhhcc
Confidence 0001246889999999988
Q ss_pred CCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||...... .....+.....++......+...+||.+||..||.+|||+.++++
T Consensus 216 ~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 293 (327)
T 1fvr_A 216 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 293 (327)
T ss_dssp CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccCCchhcchHHHHHHHHHHcCCCCCCCCCcHH-HHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 889999999999999999997 56554433 444455544333333333445569999999999999999999986
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.8e-32 Score=292.60 Aligned_cols=207 Identities=15% Similarity=0.124 Sum_probs=160.7
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC----------------------CC
Q 004998 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR----------------------SV 118 (720)
Q Consensus 63 r~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~----------------------~l 118 (720)
+..+|..+|.++ +||||+++++ ++.... .+|+|||| .+++|.+++..... .+
T Consensus 94 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 169 (344)
T 1rjb_A 94 ALMSELKMMTQLGSHENIVNLLG-ACTLSG---PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169 (344)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHTTTTCC---------------------C
T ss_pred HHHHHHHHHHhhcCCCCeeeEEE-EEeeCC---ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccC
Confidence 344788899999 9999999999 554443 57999999 89999999955432 37
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004998 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 170 ~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~---------------------- 227 (344)
T 1rjb_A 170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN---------------------- 227 (344)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT----------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCcc----------------------
Confidence 8999999999999999999999999999999999999999999999998843211100
Q ss_pred HhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004998 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
. .......||+.|+
T Consensus 228 -----------~-------------------------------------------------------~~~~~~~~t~~y~ 241 (344)
T 1rjb_A 228 -----------Y-------------------------------------------------------VVRGNARLPVKWM 241 (344)
T ss_dssp -----------S-------------------------------------------------------EEETTEEECGGGC
T ss_pred -----------c-------------------------------------------------------eeccCccCccCcc
Confidence 0 0001135788999
Q ss_pred CCccccCCCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC
Q 004998 279 SPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt 354 (720)
|||++.+..++.++|||||||++|||++ ||............+.....++......+...+|+.+||+.||.+|||
T Consensus 242 aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 321 (344)
T 1rjb_A 242 APESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPS 321 (344)
T ss_dssp CHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcC
Confidence 9999988889999999999999999997 666554443444444444333332233345569999999999999999
Q ss_pred hHHHHcC
Q 004998 355 MGELLQS 361 (720)
Q Consensus 355 a~eiL~h 361 (720)
+.+++++
T Consensus 322 ~~~l~~~ 328 (344)
T 1rjb_A 322 FPNLTSF 328 (344)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999873
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=8.8e-32 Score=283.21 Aligned_cols=209 Identities=14% Similarity=0.078 Sum_probs=160.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.+... ..+++||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 68 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~--~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ 144 (298)
T 3pls_A 68 AFLREGLLMRGLNHPNVLALIG-IMLPPEG--LPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQK 144 (298)
T ss_dssp HHHHHHHHHHTCCCTTBCCCCE-EECCSSS--CCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeeeEEE-EEecCCC--CcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3347888999999999999999 5544332 34899999 899999999776677999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+......... .
T Consensus 145 i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------~------------ 181 (298)
T 3pls_A 145 FVHRDLAARNCMLDESFTVKVADFGLARDILDREYY-------------------------------S------------ 181 (298)
T ss_dssp CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGG-------------------------------C------------
T ss_pred cccCCCCcceEEEcCCCcEEeCcCCCcccccCCccc-------------------------------c------------
Confidence 999999999999999999999999988543211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
........+|+.|+|||.+.+..++.++|||||||++
T Consensus 182 -------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 218 (298)
T 3pls_A 182 -------------------------------------------VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLL 218 (298)
T ss_dssp -------------------------------------------SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------cccCcCCCCCccccChhhhccCCCChhhchhhHHHHH
Confidence 0000113578999999999998899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ |+............+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 219 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 280 (298)
T 3pls_A 219 WELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVG 280 (298)
T ss_dssp HHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 99998 333333332334444443333332223344569999999999999999999986
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=4.5e-32 Score=285.10 Aligned_cols=205 Identities=18% Similarity=0.266 Sum_probs=155.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ +.... .+++|||| .|++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 66 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ 140 (289)
T 3og7_A 66 AFKNEVGVLRKTRHVNILLFMG-YSTAP----QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKS 140 (289)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSS----SCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCcEEEEEe-eccCC----ccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 44332 46899999 889999999666667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||++.........
T Consensus 141 i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 176 (289)
T 3og7_A 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS-------------------------------------------- 176 (289)
T ss_dssp CCCSCCCGGGEEEETTTEEEECCCC-------------------------------------------------------
T ss_pred cccccCccceEEECCCCCEEEccceecccccccccc--------------------------------------------
Confidence 999999999999999999999999987432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc---CCCCCccccchhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA---GAPVSCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~s~~sDIwSLG 298 (720)
.......||+.|+|||++. +..++.++||||||
T Consensus 177 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG 212 (289)
T 3og7_A 177 --------------------------------------------HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFG 212 (289)
T ss_dssp ---------------------------------------------------CCCTTCCHHHHC----CCSCHHHHHHHHH
T ss_pred --------------------------------------------ccccccCCCccccCchhhcccCCCCCCcccchHHHH
Confidence 0001146899999999996 55689999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccc---cccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL---LLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~---~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|||++ ||............+.....++.+ ...+|. ..+|+.+||+.||.+|||+.++++
T Consensus 213 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 281 (289)
T 3og7_A 213 IVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILA 281 (289)
T ss_dssp HHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99999999 777665555555555555444332 233444 459999999999999999999986
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.4e-32 Score=287.75 Aligned_cols=215 Identities=12% Similarity=0.059 Sum_probs=153.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCC---CcEEEEEec-CCCCHHHHHhC-----CCCCCCHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAI---DPFVHAIEW-GDVSLRQWLDK-----PKRSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~---~~~~lv~E~-~ggsL~~~L~~-----~~~~l~~~~~~~i~~QIl~a 133 (720)
+..+|..++.+++||||+++++ ++...... ...+++||| .+++|.+++.. ....+++.+++.++.||+.|
T Consensus 71 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~a 149 (323)
T 3qup_A 71 EFLREAACMKEFDHPHVAKLVG-VSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACG 149 (323)
T ss_dssp HHHHHHHHHTTCCCTTBCCCCE-EEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCceehhhc-eeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHH
Confidence 3447888999999999999999 44333221 235899999 89999999932 12258999999999999999
Q ss_pred HHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccc
Q 004998 134 VYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 134 L~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
|.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus 150 l~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~~------------------------------------ 193 (323)
T 3qup_A 150 MEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY------------------------------------ 193 (323)
T ss_dssp HHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC----------------------------------------------
T ss_pred HHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccccccccccc------------------------------------
Confidence 99999999999999999999999999999999988433111000
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcccc
Q 004998 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.......+|+.|+|||++.+..++.++|
T Consensus 194 ----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~D 221 (323)
T 3qup_A 194 ----------------------------------------------------RQGCASKLPVKWLALESLADNLYTVHSD 221 (323)
T ss_dssp -----------------------------------------------------------CCGGGCCHHHHHHCCCCHHHH
T ss_pred ----------------------------------------------------cccccccCcccccCchhhcCCCCCCccc
Confidence 0000134688999999999988999999
Q ss_pred chhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC-------hHHHHcCc
Q 004998 294 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK-------MGELLQSE 362 (720)
Q Consensus 294 IwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt-------a~eiL~hp 362 (720)
||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+||| ++++++||
T Consensus 222 i~slG~il~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 222 VWAFGVTMWEIMTRGQTPYAGIENA-EIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp HHHHHHHHHHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred hhhHHHHHHHHHhCCCCCccccChH-HHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 9999999999998 55554433 333334333333333333345569999999999999999 77778899
Q ss_pred ccCCC
Q 004998 363 FLNEP 367 (720)
Q Consensus 363 ~~~~~ 367 (720)
|+...
T Consensus 301 ~~~~~ 305 (323)
T 3qup_A 301 SVLST 305 (323)
T ss_dssp -----
T ss_pred hhcCC
Confidence 98875
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-32 Score=300.20 Aligned_cols=204 Identities=16% Similarity=0.179 Sum_probs=158.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++|||||++++ ++.... .+|+|||| .+++|.+++...+..+++..++.++.||+.||.|||++|
T Consensus 158 ~~~~E~~~l~~l~hpniv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 233 (377)
T 3cbl_A 158 KFLQEARILKQYSHPNIVRLIG-VCTQKQ---PIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC 233 (377)
T ss_dssp TTTHHHHHHTTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EEecCC---CcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 554443 57999999 899999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++........
T Consensus 234 ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~-------------------------------------------- 269 (377)
T 3cbl_A 234 CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA-------------------------------------------- 269 (377)
T ss_dssp EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE--------------------------------------------
T ss_pred cCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee--------------------------------------------
Confidence 999999999999999999999998887432110000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......+++.|+|||++.+..++.++|||||||++
T Consensus 270 ---------------------------~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il 305 (377)
T 3cbl_A 270 ---------------------------A-----------------SGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILL 305 (377)
T ss_dssp ---------------------------C-----------------CSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred ---------------------------e-----------------cCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHH
Confidence 0 00002357789999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..++. +..+| ...+||.+||+.||.+|||+.++++
T Consensus 306 ~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~ 367 (377)
T 3cbl_A 306 WETFSLGASPYPNLSNQ-QTREFVEKGGRLPC-PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQ 367 (377)
T ss_dssp HHHHTTSCCSSTTSCHH-HHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 99997 66655443 33333443333222 23344 4459999999999999999999985
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=6.8e-32 Score=284.52 Aligned_cols=207 Identities=16% Similarity=0.136 Sum_probs=158.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++.++..+. ..|++||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 72 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~ 148 (298)
T 3f66_A 72 QFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK 148 (298)
T ss_dssp HHHHHHHHHHTCCCTTBCCCCEEECCSSS---CCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeeeeEEEcCCC---ceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 34478889999999999999994344332 46899999 888999999776667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+......... .
T Consensus 149 i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~------------ 185 (298)
T 3f66_A 149 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY-------------------------------S------------ 185 (298)
T ss_dssp CCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGC-------------------------------B------------
T ss_pred ccCCCCchheEEECCCCCEEECcccccccccccchh-------------------------------c------------
Confidence 999999999999999999999999988543211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
........||+.|+|||.+.+..++.++|||||||++
T Consensus 186 -------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 222 (298)
T 3f66_A 186 -------------------------------------------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 222 (298)
T ss_dssp -------------------------------------------C-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCCCCccccChHHhcCCCCChHHHHHHHHHHH
Confidence 0000113578999999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+.....+.. +..+| ...+|+.+||++||.+|||+.|+++
T Consensus 223 ~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 284 (298)
T 3f66_A 223 WELMTRGAPPYPDVNTF-DITVYLLQGRRLLQ-PEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 284 (298)
T ss_dssp HHHHTTSCCSSTTSCTT-THHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCccCCHH-HHHHHHhcCCCCCC-CccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99998 44443332 22222322222222 22334 4559999999999999999999986
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.7e-32 Score=298.27 Aligned_cols=209 Identities=20% Similarity=0.261 Sum_probs=154.2
Q ss_pred ehhhhcccCC-----------CCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGD-----------HLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK-PKRSVDVYECLHIFRQIVEI 133 (720)
Q Consensus 66 ~e~~~Ls~l~-----------HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~a 133 (720)
+|..++.++. ||||+++++.+.........++++|||.+++|.+++.. ....+++..++.++.||+.|
T Consensus 64 ~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~a 143 (373)
T 1q8y_A 64 DEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLG 143 (373)
T ss_dssp HHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHH
Confidence 5666666665 89999999955544444457899999999999999954 34459999999999999999
Q ss_pred HHHHHHc-CceeccCCCCcEEEcc------CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004998 134 VYAAHSQ-GIVVHNVRPSCFVMSS------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 134 L~yLHs~-gIvHrDLKP~NILl~~------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
|.|||++ ||+||||||+|||++. .+.+||+|||++...+..
T Consensus 144 L~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~-------------------------------- 191 (373)
T 1q8y_A 144 LDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH-------------------------------- 191 (373)
T ss_dssp HHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC--------------------------------
T ss_pred HHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC--------------------------------
Confidence 9999998 9999999999999953 347899888876322100
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004998 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
.....||+.|+|||++.+.
T Consensus 192 -------------------------------------------------------------~~~~~~t~~y~aPE~~~~~ 210 (373)
T 1q8y_A 192 -------------------------------------------------------------YTNSIQTREYRSPEVLLGA 210 (373)
T ss_dssp -------------------------------------------------------------CCSCCSCGGGCCHHHHHTC
T ss_pred -------------------------------------------------------------CCCCCCCccccCcHHHhCC
Confidence 0113679999999999999
Q ss_pred CCCccccchhhhhhhhhccc---cCCCCchH-----HHHHHHhhc--CCCCccc--------------------------
Q 004998 287 PVSCASDIYRLGVLLFELFC---PFSTGEEK-----TRTMSSLRH--RVLPPQL-------------------------- 330 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt---pf~~~~~~-----~~~~~~l~~--~~~p~~~-------------------------- 330 (720)
.++.++|||||||++|||++ ||...... ......+.. +.+|+.+
T Consensus 211 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (373)
T 1q8y_A 211 PWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFW 290 (373)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBC
T ss_pred CCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhccccccccc
Confidence 99999999999999999999 66543210 011111110 1111110
Q ss_pred ------------ccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 331 ------------LLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 331 ------------~~~-~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
... .+...+||.+||++||.+|||+.|+|+||||+..
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 340 (373)
T 1q8y_A 291 PLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 340 (373)
T ss_dssp CHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred chhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcc
Confidence 011 1233499999999999999999999999999986
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-32 Score=299.39 Aligned_cols=209 Identities=13% Similarity=0.143 Sum_probs=159.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------CCCCHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------RSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~------~~l~~~~~~~i~~QIl~aL~ 135 (720)
+..+|..++++++|||||++++ ++.... ..|+|||| .|++|.+++.... ..+++.+++.++.||+.||.
T Consensus 120 ~~~~E~~~l~~l~hpnIv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~ 195 (367)
T 3l9p_A 120 DFLMEALIISKFNHQNIVRCIG-VSLQSL---PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 195 (367)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEecCC---CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHH
Confidence 4457888999999999999999 554443 45999999 7999999994322 35899999999999999999
Q ss_pred HHHHcCceeccCCCCcEEEccCC---ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccc
Q 004998 136 AAHSQGIVVHNVRPSCFVMSSFN---HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~~~---~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
|||++||+||||||+|||++.++ .+||+|||+++..... ..
T Consensus 196 ~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~----------------------------------~~-- 239 (367)
T 3l9p_A 196 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA----------------------------------GY-- 239 (367)
T ss_dssp HHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHH----------------------------------SS--
T ss_pred HHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccc----------------------------------cc--
Confidence 99999999999999999999555 4999988887321000 00
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccc
Q 004998 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 292 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~s 292 (720)
........||+.|+|||++.+..++.++
T Consensus 240 ----------------------------------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~ 267 (367)
T 3l9p_A 240 ----------------------------------------------------YRKGGCAMLPVKWMPPEAFMEGIFTSKT 267 (367)
T ss_dssp ----------------------------------------------------CTTCCGGGSCGGGCCHHHHHHCCCCHHH
T ss_pred ----------------------------------------------------cccCCCcCCcccEECHHHhcCCCCCcHH
Confidence 0000114679999999999888899999
Q ss_pred cchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 293 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 293 DIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
|||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.+|+++.++
T Consensus 268 DvwslG~il~ellt~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~ 342 (367)
T 3l9p_A 268 DTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 342 (367)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 99999999999997 56554443 3444444433333222233445699999999999999999999987654
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-32 Score=285.45 Aligned_cols=209 Identities=17% Similarity=0.129 Sum_probs=158.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.... ...+++|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 69 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 146 (302)
T 4e5w_A 69 DLKKEIEILRNLYHENIVKYKG-ICTEDG-GNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 146 (302)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEEC----CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeeeeee-EEecCC-CceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCC
Confidence 3447888999999999999999 444332 2358999999 789999999555556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.++|+|||.+......... +
T Consensus 147 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 183 (302)
T 4e5w_A 147 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY--------------------------------Y----------- 183 (302)
T ss_dssp EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCE--------------------------------E-----------
T ss_pred cccCCCchheEEEcCCCCEEECcccccccccCCCcc--------------------------------e-----------
Confidence 999999999999999999999999987443221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 184 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 219 (302)
T 4e5w_A 184 --------------------------------------------TVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTL 219 (302)
T ss_dssp --------------------------------------------ECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred --------------------------------------------eccCCCCCCccccCCeeecCCCCCcchhHHHHHHHH
Confidence 000113578899999999988899999999999999
Q ss_pred hhccccCCC-----------------CchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFCPFST-----------------GEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLltpf~~-----------------~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|+++..+ ..........+......+......+...+|+.+||+.||.+|||+.++++
T Consensus 220 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 295 (302)
T 4e5w_A 220 HELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE 295 (302)
T ss_dssp HHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 999993221 12222333333333333322233345569999999999999999999986
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-32 Score=289.76 Aligned_cols=210 Identities=15% Similarity=0.130 Sum_probs=161.6
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.++ +||||+++++ ++..+. ..|+||||.|++|.+++......+++..++.|+.||+.||.|||++||
T Consensus 51 ~~~E~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i 126 (330)
T 2izr_A 51 LHLEYRFYKQLGSGDGIPQVYY-FGPCGK---YNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNL 126 (330)
T ss_dssp HHHHHHHHHHHCSCTTSCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHHhhCCCCCCEEEE-EEecCC---ccEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 34677788998 9999999999 555443 679999999999999996655669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCc-----eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 143 VVHNVRPSCFVMSSFNH-----VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~-----vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
+||||||+|||++.++. +||+|||++........... .
T Consensus 127 iHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~------------------------------~------- 169 (330)
T 2izr_A 127 IYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKH------------------------------I------- 169 (330)
T ss_dssp ECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCB------------------------------C-------
T ss_pred eccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCcc------------------------------c-------
Confidence 99999999999998887 99999998854322110000 0
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRL 297 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSL 297 (720)
.........||+.|+|||++.+..++.++|||||
T Consensus 170 ----------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 203 (330)
T 2izr_A 170 ----------------------------------------------PYREHKSLTGTARYMSINTHLGKEQSRRDDLEAL 203 (330)
T ss_dssp ----------------------------------------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHH
T ss_pred ----------------------------------------------cccccCCcCCCccccChHHHcCCCCCchhHHHHH
Confidence 0000112578999999999999999999999999
Q ss_pred hhhhhhccc---cCCCC--chHHHHHHHhhc---CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 298 GVLLFELFC---PFSTG--EEKTRTMSSLRH---RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 298 Gvll~eLlt---pf~~~--~~~~~~~~~l~~---~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++|||++ ||... ......+..+.. ...+..+...+|...+|+..||..||.+||++.+|++
T Consensus 204 G~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~ 274 (330)
T 2izr_A 204 GHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRK 274 (330)
T ss_dssp HHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 999999999 77653 222233333322 1222233445677779999999999999999999875
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-32 Score=290.14 Aligned_cols=204 Identities=15% Similarity=0.111 Sum_probs=157.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++... ..++++|| .+++|.+++......+++..++.|+.||+.||.|||++|
T Consensus 63 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~----~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 137 (327)
T 3lzb_A 63 EILDEAYVMASVDNPHVCRLLG-ICLTS----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 137 (327)
T ss_dssp HHHHHHHHHTTCCBTTBCCCCE-EEESS----SEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeeEEEE-EEecC----CceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 3447888999999999999999 55544 26788888 999999999766666999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||++...+..... .
T Consensus 138 ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~--------------------------------~----------- 174 (327)
T 3lzb_A 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE--------------------------------Y----------- 174 (327)
T ss_dssp CCCSCCCGGGEEEEETTEEEECCTTC------------------------------------------------------
T ss_pred CcCCCCCHHHEEEcCCCCEEEccCcceeEccCcccc--------------------------------c-----------
Confidence 999999999999999999999999988543221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..++.++|||||||++
T Consensus 175 ---------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il 209 (327)
T 3lzb_A 175 ---------------------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 209 (327)
T ss_dssp --------------------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccCCCccccccCHHHHcCCCCChHHHHHHHHHHH
Confidence 00013568899999999998899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+||++.|+++
T Consensus 210 ~ell~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 271 (327)
T 3lzb_A 210 WELMTFGSKPYDGIPAS-EISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELII 271 (327)
T ss_dssp HHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHCCCCCCCCCCHH-HHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99998 56554333 233344444333333334455669999999999999999999986
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-32 Score=285.24 Aligned_cols=195 Identities=17% Similarity=0.227 Sum_probs=152.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++.++. ..++|||| .|++|.+++......+++..++.++.||+.||.|||++||
T Consensus 59 ~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i 134 (289)
T 4fvq_A 59 FFEAASMMSKLSHKHLVLNYG-VCVCGD---ENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTL 134 (289)
T ss_dssp HHHHHHHHHTSCCTTBCCEEE-EECCTT---CCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCEeEEEE-EEEeCC---CCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCe
Confidence 347788999999999999999 555443 46899999 7899999997665569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCc--------eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 143 VVHNVRPSCFVMSSFNH--------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~--------vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
+||||||+|||++.++. +||+|||.+......
T Consensus 135 vH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---------------------------------------- 174 (289)
T 4fvq_A 135 IHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK---------------------------------------- 174 (289)
T ss_dssp CCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH----------------------------------------
T ss_pred ECCCcCcceEEEecCCcccccccceeeeccCcccccccCc----------------------------------------
Confidence 99999999999998887 888777766221000
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCcccc
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASD 293 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sD 293 (720)
....||+.|+|||++.+ ..++.++|
T Consensus 175 ------------------------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~~D 200 (289)
T 4fvq_A 175 ------------------------------------------------------DILQERIPWVPPECIENPKNLNLATD 200 (289)
T ss_dssp ------------------------------------------------------HHHHHTTTTSCHHHHHCGGGCCHHHH
T ss_pred ------------------------------------------------------cccCCcCcccCHHHhCCCCCCCchhH
Confidence 01356889999999988 56899999
Q ss_pred chhhhhhhhhccc----cCCCCchHHHHHHHhhc-CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 294 IYRLGVLLFELFC----PFSTGEEKTRTMSSLRH-RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 294 IwSLGvll~eLlt----pf~~~~~~~~~~~~l~~-~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||||++|||++ ||...... ........ ..+++. ..+...+|+.+||++||.+|||+.++++
T Consensus 201 iwslG~il~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps~~~ll~ 268 (289)
T 4fvq_A 201 KWSFGTTLWEICSGGDKPLSALDSQ-RKLQFYEDRHQLPAP---KAAELANLINNCMDYEPDHRPSFRAIIR 268 (289)
T ss_dssp HHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHTTCCCCCC---SSCTTHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCccccchH-HHHHHhhccCCCCCC---CCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 9999999999999 33333322 22222222 222222 2345579999999999999999999997
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-32 Score=283.68 Aligned_cols=208 Identities=22% Similarity=0.312 Sum_probs=163.2
Q ss_pred eeehhhhcccCCCCCceecccceeecC-------------CCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENE-------------AAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFR 128 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~-------------~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~ 128 (720)
..+|..++.+++||||+++++ ++... .....+|++||| .+++|.+++.. ....+++..++.++.
T Consensus 51 ~~~e~~~l~~l~h~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~ 129 (284)
T 2a19_B 51 AEREVKALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE 129 (284)
T ss_dssp GHHHHHHHHHCCCTTBCCEEE-EEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCEEEEee-eEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHH
Confidence 346788999999999999999 44321 112347999999 88899999943 334699999999999
Q ss_pred HHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccc
Q 004998 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
||+.||.|||++||+||||||+||+++.++.++|+|||.+.......
T Consensus 130 qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--------------------------------- 176 (284)
T 2a19_B 130 QITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG--------------------------------- 176 (284)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCS---------------------------------
T ss_pred HHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccccc---------------------------------
Confidence 99999999999999999999999999999999999998874321110
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC
Q 004998 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 288 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 288 (720)
......||+.|+|||++.+..+
T Consensus 177 ----------------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~ 198 (284)
T 2a19_B 177 ----------------------------------------------------------KRTRSKGTLRYMSPEQISSQDY 198 (284)
T ss_dssp ----------------------------------------------------------CCCCCCSCCTTSCHHHHHCSCC
T ss_pred ----------------------------------------------------------cccccCCcccccChhhhccCCC
Confidence 0011357999999999999889
Q ss_pred CccccchhhhhhhhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 289 SCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 289 s~~sDIwSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
+.++|||||||++|||+++..+..........+....+++.+ .+...+|+.+||+.||.+|||+.|++++.+.-.
T Consensus 199 ~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 199 GKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIF---DKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp CTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHTTCCCTTS---CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred cchhhhHHHHHHHHHHHhcCCcchhHHHHHHHhhcccccccC---CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 999999999999999999655544444445555555444332 234459999999999999999999999876443
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=4e-32 Score=296.89 Aligned_cols=208 Identities=15% Similarity=0.124 Sum_probs=152.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++.++..+. ..|+|||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 136 ~~~~E~~il~~l~hpnIv~~~~~~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 212 (373)
T 3c1x_A 136 QFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 212 (373)
T ss_dssp HHHHHHTTSTTCCCTTBCCCCEEECCCSS---CCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcceEEEEEEcCCC---CeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 34478889999999999999994343332 46899999 889999999777667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++........ .
T Consensus 213 ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~--------------------------------~----------- 249 (373)
T 3c1x_A 213 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD--------------------------------S----------- 249 (373)
T ss_dssp CCCSCCCGGGEEECTTCCEEECCC--------------------------------------------------------
T ss_pred EecCccchheEEECCCCCEEEeeccccccccccccc--------------------------------c-----------
Confidence 999999999999999999999999988543111000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
........+|+.|+|||++.+..++.++|||||||++
T Consensus 250 -------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il 286 (373)
T 3c1x_A 250 -------------------------------------------VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 286 (373)
T ss_dssp ---------------------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHH
Confidence 0000113568899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..+.......+...+|+.+||+.||.+|||+.|+++
T Consensus 287 ~ellt~~~~p~~~~~~~-~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~ 348 (373)
T 3c1x_A 287 WELMTRGAPPYPDVNTF-DITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 348 (373)
T ss_dssp HHHHTTSCCSCTTSCSS-CHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCcCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99998 55443332 222233333222222222234459999999999999999999986
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-32 Score=303.88 Aligned_cols=211 Identities=16% Similarity=0.228 Sum_probs=146.6
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCC------CCHHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRS------VDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~------l~~~~~~~i~~QIl~aL~yL 137 (720)
.+|..+|.++ +|||||++++ ++.+.. .+|+||||.+++|.+++...... .++..++.++.||+.||.||
T Consensus 56 ~~E~~~l~~l~~HpnIv~~~~-~~~~~~---~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~L 131 (434)
T 2rio_A 56 LMEIKLLTESDDHPNVIRYYC-SETTDR---FLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131 (434)
T ss_dssp HHHHHHHHHHTTSTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCcCeEEE-EEecCC---eEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHH
Confidence 3677788765 8999999999 554443 68999999778999999654321 13335678999999999999
Q ss_pred HHcCceeccCCCCcEEEccC-------------CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhc
Q 004998 138 HSQGIVVHNVRPSCFVMSSF-------------NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTR 204 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~-------------~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 204 (720)
|++||+||||||+|||++.+ +.+||+|||++........
T Consensus 132 H~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~---------------------------- 183 (434)
T 2rio_A 132 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS---------------------------- 183 (434)
T ss_dssp HHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC-------------------------------
T ss_pred HHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCc----------------------------
Confidence 99999999999999999754 3788888887743221100
Q ss_pred ccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc
Q 004998 205 LRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA 284 (720)
Q Consensus 205 ~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 284 (720)
.+ ........||+.|+|||++.
T Consensus 184 ----~~------------------------------------------------------~~~~~~~~gt~~y~aPE~~~ 205 (434)
T 2rio_A 184 ----SF------------------------------------------------------RTNLNNPSGTSGWRAPELLE 205 (434)
T ss_dssp ---------------------------------------------------------------------CCTTSCHHHHS
T ss_pred ----cc------------------------------------------------------eeeecCCCCCCCccCHHHhc
Confidence 00 00001147899999999997
Q ss_pred C-------CCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCcccc----cc-CchHHHHHHHcCCCC
Q 004998 285 G-------APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLL----LK-FPKEASFCLWLLHPE 348 (720)
Q Consensus 285 ~-------~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~----~~-~p~~~~li~~~L~~d 348 (720)
+ ..++.++|||||||++|||++ ||....... ...+......+... .. .+...+||.+||+.|
T Consensus 206 ~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 283 (434)
T 2rio_A 206 ESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHD 283 (434)
T ss_dssp CCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSS
T ss_pred cccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCC
Confidence 6 558999999999999999998 565433222 11122111111111 11 134459999999999
Q ss_pred CCCCCChHHHHcCcccCCC
Q 004998 349 PSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~ 367 (720)
|.+|||+.++++||||...
T Consensus 284 P~~Rps~~eil~hp~f~~~ 302 (434)
T 2rio_A 284 PLKRPTAMKVLRHPLFWPK 302 (434)
T ss_dssp GGGSCCHHHHHTSGGGSCH
T ss_pred hhhCCCHHHHHhCCccCCc
Confidence 9999999999999999764
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=294.01 Aligned_cols=205 Identities=16% Similarity=0.160 Sum_probs=161.0
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004998 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+..+|..++.++ +|||||++++ ++.... .+|+|||| .+++|.+++.... ..+++.+++.
T Consensus 120 ~~~~E~~~l~~l~~hpnIv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 195 (382)
T 3tt0_A 120 DLISEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVS 195 (382)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHH
T ss_pred HHHHHHHHHHHhcCCchhhhhee-eeccCC---ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHH
Confidence 344788889988 9999999999 555443 46999999 7899999995432 3599999999
Q ss_pred HHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcc
Q 004998 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
|+.||+.||.|||++||+||||||+|||++.++.+||+|||++...+.....
T Consensus 196 i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~---------------------------- 247 (382)
T 3tt0_A 196 CAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY---------------------------- 247 (382)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTT----------------------------
T ss_pred HHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCccccccccccc----------------------------
Confidence 9999999999999999999999999999999999999999988543221000
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC
Q 004998 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
.......||+.|+|||++.+
T Consensus 248 ------------------------------------------------------------~~~~~~~~t~~y~aPE~~~~ 267 (382)
T 3tt0_A 248 ------------------------------------------------------------KKTTNGRLPVKWMAPEALFD 267 (382)
T ss_dssp ------------------------------------------------------------CCCTTCCCGGGGSCHHHHHS
T ss_pred ------------------------------------------------------------ccccCCCCCcceeCHHHhcC
Confidence 00011356889999999999
Q ss_pred CCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||..... ......+.....++......+...+|+.+||+.||.+|||+.|+++
T Consensus 268 ~~~~~~~DiwslG~il~ellt~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 345 (382)
T 3tt0_A 268 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 345 (382)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-HHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 989999999999999999998 5655433 3444455544433333333445569999999999999999999987
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.6e-32 Score=287.32 Aligned_cols=198 Identities=18% Similarity=0.244 Sum_probs=152.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC--CCCHHHHHHHHHHHHHHHHHHHH-
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR--SVDVYECLHIFRQIVEIVYAAHS- 139 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~--~l~~~~~~~i~~QIl~aL~yLHs- 139 (720)
..+|..+|.+++||||+++++ ++.+ ..|+|||| .|++|.+++..... .+++..++.++.||+.||.|||+
T Consensus 48 ~~~E~~~l~~l~hp~iv~~~~-~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~ 121 (307)
T 2eva_A 48 FIVELRQLSRVNHPNIVKLYG-ACLN-----PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSM 121 (307)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-BCTT-----TTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHhcCCCCCcCeEEE-EEcC-----CcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhC
Confidence 347788999999999999999 4432 35899999 89999999965432 47899999999999999999999
Q ss_pred --cCceeccCCCCcEEEccCCc-eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 140 --QGIVVHNVRPSCFVMSSFNH-VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 140 --~gIvHrDLKP~NILl~~~~~-vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
+||+||||||+|||++.++. +||+|||.+......
T Consensus 122 ~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~------------------------------------------ 159 (307)
T 2eva_A 122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH------------------------------------------ 159 (307)
T ss_dssp SSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------------------------------------------------
T ss_pred CCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc------------------------------------------
Confidence 89999999999999998886 799988877322100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchh
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
.....||+.|+|||++.+..++.++||||
T Consensus 160 ---------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~s 188 (307)
T 2eva_A 160 ---------------------------------------------------MTNNKGSAAWMAPEVFEGSNYSEKCDVFS 188 (307)
T ss_dssp --------------------------------------------------------CCTTSSCHHHHTCCCCCTHHHHHH
T ss_pred ---------------------------------------------------cccCCCCCceEChhhhCCCCCCcHHHHHH
Confidence 00135799999999999988999999999
Q ss_pred hhhhhhhccc---cCCCCc-hHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 297 LGVLLFELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~-~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++|||++ ||.... .....+..+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 189 lG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 256 (307)
T 2eva_A 189 WGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVK 256 (307)
T ss_dssp HHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 9999999999 665432 222333334344344333333344559999999999999999999986
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=8.3e-32 Score=294.40 Aligned_cols=205 Identities=16% Similarity=0.161 Sum_probs=153.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++ ++.... .+|+|||| .+++|.+++.+....+++.+++.++.||+.||.|||++||
T Consensus 93 ~~~E~~~l~~l~h~niv~~~~-~~~~~~---~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 168 (373)
T 2qol_A 93 FLGEASIMGQFDHPNIIRLEG-VVTKSK---PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGY 168 (373)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCCCeEEE-EEeeCC---ceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 347888999999999999999 554443 57999999 7999999997766679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||+++........ ..
T Consensus 169 vH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------~~------------ 205 (373)
T 2qol_A 169 VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA-------------------------------AY------------ 205 (373)
T ss_dssp CCSCCCGGGEEECTTCCEEECCC---------------------------------------------------------
T ss_pred eCCCCCcceEEEcCCCCEEECcCccccccccCCcc-------------------------------ce------------
Confidence 99999999999999999999999987443211000 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......+|+.|+|||++.+..++.++|||||||++|
T Consensus 206 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ 241 (373)
T 2qol_A 206 --------------------------------------------TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLW 241 (373)
T ss_dssp ----------------------------------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred --------------------------------------------eccCCCcCCCccChhhhccCCcCchhcHHHHHHHHH
Confidence 000024578899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++......+...+|+.+||+.||.+||++.++++
T Consensus 242 ellt~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~ 302 (373)
T 2qol_A 242 EVMSYGERPYWEMSNQ-DVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302 (373)
T ss_dssp HHHTTC-CTTTTCCHH-HHHHHHHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence 9886 66655443 333444433222222222334559999999999999999999985
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-32 Score=287.88 Aligned_cols=210 Identities=14% Similarity=0.132 Sum_probs=151.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH--- 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH--- 138 (720)
..+.+...+..++||||+++++.+.........+|+|||| .+++|.++++.. .+++..++.++.||+.||.|||
T Consensus 48 ~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~ 125 (301)
T 3q4u_A 48 FRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEI 125 (301)
T ss_dssp HHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCB
T ss_pred HHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhh
Confidence 3345555555589999999999555444444568999999 889999999543 4999999999999999999999
Q ss_pred -----HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccc
Q 004998 139 -----SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 139 -----s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
++||+||||||+|||++.++.+||+|||++......... .
T Consensus 126 ~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~--- 170 (301)
T 3q4u_A 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ--------------------------------L--- 170 (301)
T ss_dssp CSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE--------------------------------E---
T ss_pred hhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccccccc--------------------------------c---
Confidence 999999999999999999999999999887432111000 0
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC------C
Q 004998 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA------P 287 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~------~ 287 (720)
........||+.|+|||++.+. .
T Consensus 171 ---------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 199 (301)
T 3q4u_A 171 ---------------------------------------------------DVGNNPRVGTKRYMAPEVLDETIQVDCFD 199 (301)
T ss_dssp ---------------------------------------------------ECCCCCCCCCGGGCCHHHHTTCCCTTCHH
T ss_pred ---------------------------------------------------cccccccccccceeChhhhcCcCCCCccc
Confidence 0000114789999999999877 4
Q ss_pred CCccccchhhhhhhhhcccc-------------CCCC----chHHHHHHHhhcCCCCccccc------cCchHHHHHHHc
Q 004998 288 VSCASDIYRLGVLLFELFCP-------------FSTG----EEKTRTMSSLRHRVLPPQLLL------KFPKEASFCLWL 344 (720)
Q Consensus 288 ~s~~sDIwSLGvll~eLltp-------------f~~~----~~~~~~~~~l~~~~~p~~~~~------~~p~~~~li~~~ 344 (720)
++.++|||||||++|||+++ |... .........+......+.++. ..+...+|+.+|
T Consensus 200 ~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 279 (301)
T 3q4u_A 200 SYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKEC 279 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHH
Confidence 56799999999999999974 3221 111222222222222222211 112345999999
Q ss_pred CCCCCCCCCChHHHHc
Q 004998 345 LHPEPSGRPKMGELLQ 360 (720)
Q Consensus 345 L~~dP~~Rpta~eiL~ 360 (720)
|+.||.+|||+.++++
T Consensus 280 l~~dP~~Rps~~~i~~ 295 (301)
T 3q4u_A 280 WYQNPSARLTALRIKK 295 (301)
T ss_dssp CCSSGGGSCCHHHHHH
T ss_pred hhcChhhCCCHHHHHH
Confidence 9999999999999986
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-31 Score=281.65 Aligned_cols=206 Identities=13% Similarity=0.110 Sum_probs=161.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++..+ .+++|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 56 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 130 (287)
T 1u59_A 56 EMMREAQIMHQLDNPYIVRLIG-VCQAE----ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 130 (287)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEESS----SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeEEEE-EecCC----CcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 55433 47999999 889999999666666999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+...+..... .
T Consensus 131 i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 167 (287)
T 1u59_A 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY--------------------------------Y----------- 167 (287)
T ss_dssp EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE--------------------------------E-----------
T ss_pred EeeCCCchheEEEcCCCCEEECcccceeeeccCcce--------------------------------e-----------
Confidence 999999999999999999999999988543221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 168 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 203 (287)
T 1u59_A 168 --------------------------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM 203 (287)
T ss_dssp --------------------------------------------CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHH
T ss_pred --------------------------------------------eccccccccccccCHHHhccCCCCchhhHHHHHHHH
Confidence 000013568899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||++ ||...... ..+..+.....++......+...+||.+||..||.+||++.+++++
T Consensus 204 ~ellt~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 266 (287)
T 1u59_A 204 WEALSYGQKPYKKMKGP-EVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR 266 (287)
T ss_dssp HHHHTTSCCTTTTCCTH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHcCCCCCcccCCHH-HHHHHHhcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99997 66554433 3444444443333322333445599999999999999999999974
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.8e-32 Score=285.37 Aligned_cols=205 Identities=16% Similarity=0.177 Sum_probs=158.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-----------------------CCC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-----------------------RSV 118 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-----------------------~~l 118 (720)
+..+|..+|.+++||||+++++ ++.... .+|+|||| .|++|.+++.... ..+
T Consensus 72 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (314)
T 2ivs_A 72 DLLSEFNVLKQVNHPHVIKLYG-ACSQDG---PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147 (314)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEE
T ss_pred HHHHHHHHHhhCCCCceeeEEE-EEecCC---ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCc
Confidence 3447888999999999999999 554443 57999999 8899999995432 238
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004998 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
++.+++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.........
T Consensus 148 ~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~--------------------- 206 (314)
T 2ivs_A 148 TMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY--------------------- 206 (314)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCE---------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccccccccccccc---------------------
Confidence 99999999999999999999999999999999999999999999999987433211000
Q ss_pred HhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004998 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
.......+|+.|+
T Consensus 207 -------------------------------------------------------------------~~~~~~~~~~~y~ 219 (314)
T 2ivs_A 207 -------------------------------------------------------------------VKRSQGRIPVKWM 219 (314)
T ss_dssp -------------------------------------------------------------------ECSSCCCSCGGGC
T ss_pred -------------------------------------------------------------------eeccCCCCccccc
Confidence 0000135688999
Q ss_pred CCccccCCCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC
Q 004998 279 SPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt 354 (720)
|||++.+..++.++|||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||
T Consensus 220 aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps 298 (314)
T 2ivs_A 220 AIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPE-RLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPV 298 (314)
T ss_dssp CHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred ChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcC
Confidence 9999998889999999999999999997 56544332 333444444333332233345569999999999999999
Q ss_pred hHHHHc
Q 004998 355 MGELLQ 360 (720)
Q Consensus 355 a~eiL~ 360 (720)
+.++++
T Consensus 299 ~~~l~~ 304 (314)
T 2ivs_A 299 FADISK 304 (314)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-32 Score=282.56 Aligned_cols=203 Identities=21% Similarity=0.194 Sum_probs=157.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.++ ..|++||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 59 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 133 (281)
T 3cc6_A 59 KFMSEAVIMKNLDHPHIVKLIG-IIEEE----PTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESIN 133 (281)
T ss_dssp HHHHHHHHHHHHCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcceEEE-EEcCC----CCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 55443 35899999 889999999665556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+.........
T Consensus 134 i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 169 (281)
T 3cc6_A 134 CVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY-------------------------------------------- 169 (281)
T ss_dssp CCCCCCSGGGEEEEETTEEEECCCCGGGCC--------------------------------------------------
T ss_pred cccCCCccceEEECCCCcEEeCccCCCccccccccc--------------------------------------------
Confidence 999999999999999999999999887433211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 170 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 204 (281)
T 3cc6_A 170 ---------------------------------------------KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCM 204 (281)
T ss_dssp ------------------------------------------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccccCCCCcceeCchhhccCCCCchhccHHHHHHH
Confidence 00013468899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.|+++
T Consensus 205 ~~llt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~ 266 (281)
T 3cc6_A 205 WEILSFGKQPFFWLENK-DVIGVLEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVC 266 (281)
T ss_dssp HHHHTTTCCTTTTSCGG-GHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCcccCChH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 99997 56543332 223333333333322223344569999999999999999999986
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=7.4e-32 Score=289.83 Aligned_cols=205 Identities=15% Similarity=0.130 Sum_probs=159.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-----------------------CCC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-----------------------RSV 118 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-----------------------~~l 118 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .+++|.++|.... ..+
T Consensus 96 ~~~~E~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (343)
T 1luf_A 96 DFQREAALMAEFDNPNIVKLLG-VCAVGK---PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 171 (343)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTCC----------------------CCC
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EEccCC---ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCC
Confidence 3447888999999999999999 555443 57999999 8899999995421 458
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004998 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 172 ~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~------------------------ 227 (343)
T 1luf_A 172 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA------------------------ 227 (343)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGG------------------------
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccC------------------------
Confidence 99999999999999999999999999999999999999999999999887332110
Q ss_pred HhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004998 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
+. ........||+.|+
T Consensus 228 ----------~~------------------------------------------------------~~~~~~~~~t~~y~ 243 (343)
T 1luf_A 228 ----------DY------------------------------------------------------YKADGNDAIPIRWM 243 (343)
T ss_dssp ----------GC------------------------------------------------------BC----CCBCGGGC
T ss_pred ----------cc------------------------------------------------------ccccCCCcccceec
Confidence 00 00001135789999
Q ss_pred CCccccCCCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC
Q 004998 279 SPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt 354 (720)
|||++.+..++.++|||||||++|||++ ||...... .....+..+..++......+...+|+.+||+.||.+||+
T Consensus 244 aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps 322 (343)
T 1luf_A 244 PPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE-EVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPS 322 (343)
T ss_dssp CHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred ChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChH-HHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCC
Confidence 9999998889999999999999999997 66554443 344444444433322222334559999999999999999
Q ss_pred hHHHHc
Q 004998 355 MGELLQ 360 (720)
Q Consensus 355 a~eiL~ 360 (720)
+.++++
T Consensus 323 ~~~~~~ 328 (343)
T 1luf_A 323 FCSIHR 328 (343)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.1e-32 Score=290.45 Aligned_cols=203 Identities=16% Similarity=0.176 Sum_probs=139.2
Q ss_pred hcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhC----CCCCCCHHHHHHHHHHHHHHHHHHHHc-Ccee
Q 004998 70 ELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAAHSQ-GIVV 144 (720)
Q Consensus 70 ~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~----~~~~l~~~~~~~i~~QIl~aL~yLHs~-gIvH 144 (720)
++..++||||+++++ ++.... .+|+||||..++|.+++.. ....+++..+..++.||+.||.|||++ ||+|
T Consensus 74 ~~~~~~h~niv~~~~-~~~~~~---~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH 149 (327)
T 3aln_A 74 VMRSSDCPYIVQFYG-ALFREG---DCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIH 149 (327)
T ss_dssp HHSSCCCTTBCCEEE-EEECSS---EEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHcCCCCcEeeeee-EEEeCC---ceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeE
Confidence 678899999999999 454443 6799999966799988842 245599999999999999999999999 9999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||++.......
T Consensus 150 ~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~------------------------------------------------- 180 (327)
T 3aln_A 150 RDIKPSNILLDRSGNIKLCDFGISGQLVDSI------------------------------------------------- 180 (327)
T ss_dssp SCCCGGGEEEETTTEEEECCCSSSCC------------------------------------------------------
T ss_pred CCCCHHHEEEcCCCCEEEccCCCceeccccc-------------------------------------------------
Confidence 9999999999999999999998874321110
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccc----cCCCCCccccchhhhhh
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL----AGAPVSCASDIYRLGVL 300 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l----~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++ .+..++.++|||||||+
T Consensus 181 ------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~i 218 (327)
T 3aln_A 181 ------------------------------------------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGIT 218 (327)
T ss_dssp -------------------------------------------------------------------CCSHHHHHHHHHH
T ss_pred ------------------------------------------ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHH
Confidence 00013679999999999 45558999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCc---cccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPP---QLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~---~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
+|||++ ||.........+..+.....+. .....+ +...+|+.+||+.||.+|||+.++++||||...
T Consensus 219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 292 (327)
T 3aln_A 219 LYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMY 292 (327)
T ss_dssp HHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred HHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHh
Confidence 999999 6665433322222222222221 111223 445599999999999999999999999999764
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=99.97 E-value=7e-32 Score=302.34 Aligned_cols=200 Identities=16% Similarity=0.132 Sum_probs=156.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.+++|||||++++++..... .+|+|||| .+++|.++|...+ ..+++..++.++.||+.||.|||++|
T Consensus 233 ~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 309 (450)
T 1k9a_A 233 FLAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 309 (450)
T ss_dssp HHHHHHHHHTCCCTTBCCEEEEEECTTS---CEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhccCCCEEEEEEEEEcCCC---ceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3478889999999999999994443332 57999999 8899999995443 34799999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++.....
T Consensus 310 ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----------------------------------------------- 342 (450)
T 1k9a_A 310 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----------------------------------------------- 342 (450)
T ss_dssp EECSCCCGGGEEECTTSCEEECCCTTCEECC-------------------------------------------------
T ss_pred eeCCCCCHhhEEECCCCCEEEeeCCCccccccc-----------------------------------------------
Confidence 999999999999999999999998887321100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+++.|+|||++.+..++.++|||||||++
T Consensus 343 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l 376 (450)
T 1k9a_A 343 ----------------------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 376 (450)
T ss_dssp --------------------------------------------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHH
T ss_pred ----------------------------------------------ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHH
Confidence 0002457889999999998999999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..++......+...+||.+||+.||.+|||+.++++
T Consensus 377 ~el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~ 438 (450)
T 1k9a_A 377 WEIYSFGRVPYPRIPLK-DVVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLRE 438 (450)
T ss_dssp HHHHTTTCCSSTTSCTT-THHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99997 67654333 233344444333322223344559999999999999999999985
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=284.83 Aligned_cols=205 Identities=15% Similarity=0.177 Sum_probs=158.9
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC-----------------CCCHHHHH
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR-----------------SVDVYECL 124 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~-----------------~l~~~~~~ 124 (720)
..+|..+|.++ +||||+++++ ++..+. .+++|||| .+++|.+++..... .+++.+++
T Consensus 73 ~~~E~~~l~~l~~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (313)
T 1t46_A 73 LMSELKVLSYLGNHMNIVNLLG-ACTIGG---PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148 (313)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHH
T ss_pred HHHHHHHHhhcccCCCeeeEEE-EEecCC---CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHH
Confidence 34778889999 9999999999 555543 56999999 78999999954332 48999999
Q ss_pred HHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhc
Q 004998 125 HIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTR 204 (720)
Q Consensus 125 ~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 204 (720)
.++.||+.||.|||++||+||||||+||+++.++.+||+|||.+...+....
T Consensus 149 ~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------------------- 200 (313)
T 1t46_A 149 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN---------------------------- 200 (313)
T ss_dssp HHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTT----------------------------
T ss_pred HHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEcccccccccccccc----------------------------
Confidence 9999999999999999999999999999999999999999988754322100
Q ss_pred ccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc
Q 004998 205 LRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA 284 (720)
Q Consensus 205 ~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 284 (720)
+ .......||+.|+|||++.
T Consensus 201 -----~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~ 220 (313)
T 1t46_A 201 -----Y-------------------------------------------------------VVKGNARLPVKWMAPESIF 220 (313)
T ss_dssp -----S-------------------------------------------------------EECSSSEECGGGCCHHHHH
T ss_pred -----c-------------------------------------------------------eeccCCCCcceeeChHHhc
Confidence 0 0000135688999999998
Q ss_pred CCCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 285 GAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 285 ~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+..++.++|||||||++|||++ ||............+.....+.......+...+|+.+||++||.+|||+.|+++
T Consensus 221 ~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 300 (313)
T 1t46_A 221 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300 (313)
T ss_dssp HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 8889999999999999999997 665544333344444433322222223344559999999999999999999986
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.3e-32 Score=283.83 Aligned_cols=208 Identities=14% Similarity=0.125 Sum_probs=156.5
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..++..+ +||||+++++ ++.... ..|+||||.+++|.+++...+..+++.+++.++.||+.||.|||++||+|
T Consensus 54 ~e~~~~~~l~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH 129 (298)
T 1csn_A 54 DEYRTYKLLAGCTGIPNVYY-FGQEGL---HNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVY 129 (298)
T ss_dssp HHHHHHHHTTTCTTCCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHHHHhcCCCCCeEEe-ecCCCc---eeEEEEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEec
Confidence 566677777 7999999999 554443 67999999999999999766666999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCc-----eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 145 HNVRPSCFVMSSFNH-----VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 145 rDLKP~NILl~~~~~-----vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|||||+|||++.++. +||+|||++........... .
T Consensus 130 ~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~------------------------------~--------- 170 (298)
T 1csn_A 130 RDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH------------------------------I--------- 170 (298)
T ss_dssp CCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCB------------------------------C---------
T ss_pred CCCCHHHEEeccCCCCCCCeEEEEECcccccccccccccc------------------------------c---------
Confidence 999999999987766 99999998854322110000 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.........||+.|+|||++.+..++.++|||||||
T Consensus 171 --------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~ 206 (298)
T 1csn_A 171 --------------------------------------------PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGH 206 (298)
T ss_dssp --------------------------------------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred --------------------------------------------cccCccCCCCCcccCCchhhcCCCCChHHHHHHHHH
Confidence 000011257899999999999988999999999999
Q ss_pred hhhhccc---cCCCCc--hHHHHHHHhhcC---CCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 300 LLFELFC---PFSTGE--EKTRTMSSLRHR---VLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 300 ll~eLlt---pf~~~~--~~~~~~~~l~~~---~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|||++ ||.... .....+..+... ...+.+...+| ...+|+.+||..||.+||++.+|++
T Consensus 207 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~ 276 (298)
T 1csn_A 207 VFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 276 (298)
T ss_dssp HHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred HHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 9999999 676532 122222222221 12222333444 4459999999999999999999985
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.7e-31 Score=283.80 Aligned_cols=208 Identities=14% Similarity=0.122 Sum_probs=154.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---KRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++..++||||+++++ ++.... ..++|||| .+++|.+++... ...+++..++.++.||+.||.|||
T Consensus 73 ~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 148 (326)
T 3uim_A 73 QFQTEVEMISMAVHRNLLRLRG-FCMTPT---ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLH 148 (326)
T ss_dssp HHHHHHHGGGTCCCTTBCCCCE-EECCSS---CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCccceEE-EEecCC---ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4457788999999999999999 555443 46899999 899999999543 334899999999999999999999
Q ss_pred Hc---CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 139 SQ---GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 139 s~---gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
++ ||+||||||+|||++.++.+||+|||++...+.....
T Consensus 149 ~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------- 190 (326)
T 3uim_A 149 DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-------------------------------------- 190 (326)
T ss_dssp HSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSC--------------------------------------
T ss_pred hCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCccccc--------------------------------------
Confidence 99 9999999999999999999999999887432111000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccch
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIY 295 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIw 295 (720)
......||+.|+|||++.+..++.++|||
T Consensus 191 ---------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~ 219 (326)
T 3uim_A 191 ---------------------------------------------------VTTAVRGTIGHIAPEYLSTGKSSEKTDVF 219 (326)
T ss_dssp ---------------------------------------------------EECCCCSCGGGCCHHHHHHSEECHHHHHH
T ss_pred ---------------------------------------------------ccccccCCcCccCHHHhccCCCCccccch
Confidence 00113589999999999888899999999
Q ss_pred hhhhhhhhccc---cCCCCc-------hHHHHHHHh-hcCC----CCcccccc-----CchHHHHHHHcCCCCCCCCCCh
Q 004998 296 RLGVLLFELFC---PFSTGE-------EKTRTMSSL-RHRV----LPPQLLLK-----FPKEASFCLWLLHPEPSGRPKM 355 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~-------~~~~~~~~l-~~~~----~p~~~~~~-----~p~~~~li~~~L~~dP~~Rpta 355 (720)
||||++|||++ ||.... ......... .... ........ .+...+|+.+||+.||.+|||+
T Consensus 220 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 299 (326)
T 3uim_A 220 GYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKM 299 (326)
T ss_dssp HHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCH
T ss_pred hHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCH
Confidence 99999999999 553110 000111111 1110 01111111 1234599999999999999999
Q ss_pred HHHHcCcc
Q 004998 356 GELLQSEF 363 (720)
Q Consensus 356 ~eiL~hp~ 363 (720)
.|+++|-.
T Consensus 300 ~ell~~L~ 307 (326)
T 3uim_A 300 SEVVRMLE 307 (326)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99998654
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=285.07 Aligned_cols=202 Identities=16% Similarity=0.207 Sum_probs=150.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..++.+++||||+++++ ++..+. .+|++||| .|++|.+++.... .+++.+++.++.||+.||.|||++||
T Consensus 81 ~~~e~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i 155 (309)
T 2h34_A 81 MQREARTAGRLQEPHVVPIHD-FGEIDG---QLYVDMRLINGVDLAAMLRRQG-PLAPPRAVAIVRQIGSALDAAHAAGA 155 (309)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCCCEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhhcCCCCeeEEEE-EEeeCC---eEEEEEEecCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCcC
Confidence 347888999999999999999 554443 67999999 7889999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.+.........
T Consensus 156 ~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------------------- 190 (309)
T 2h34_A 156 THRDVKPENILVSADDFAYLVDFGIASATTDEKLT--------------------------------------------- 190 (309)
T ss_dssp CCSCCCGGGEEECTTSCEEECSCCC-------------------------------------------------------
T ss_pred CcCCCChHHEEEcCCCCEEEecCccCccccccccc---------------------------------------------
Confidence 99999999999999999999999887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 191 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 226 (309)
T 2h34_A 191 --------------------------------------------QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLY 226 (309)
T ss_dssp --------------------------------------------------CCGGGCCGGGTCC----CCCHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHH
Confidence 001146899999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCC-ccccccCch-HHHHHHHcCCCCCCCCC-ChHHHHc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLP-PQLLLKFPK-EASFCLWLLHPEPSGRP-KMGELLQ 360 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p-~~~~~~~p~-~~~li~~~L~~dP~~Rp-ta~eiL~ 360 (720)
||++ ||...... .....+.....+ ......+|. ..+||.+||+.||.+|| +++++++
T Consensus 227 ~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~ 289 (309)
T 2h34_A 227 ECLTGSPPYQGDQLS-VMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA 289 (309)
T ss_dssp HHHHSSCSSCSCHHH-HHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred HHHHCCCCCCCchHH-HHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence 9999 67655433 233333333222 233344454 45999999999999999 8888775
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-31 Score=281.23 Aligned_cols=208 Identities=17% Similarity=0.178 Sum_probs=157.2
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
.+..+|..++.+++||||+++++ ++.... .++++||| .|++|.+++......+++..++.++.||+.||.|||++
T Consensus 74 ~~~~~e~~~l~~l~h~~iv~~~~-~~~~~~---~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~ 149 (319)
T 2y4i_B 74 KAFKREVMAYRQTRHENVVLFMG-ACMSPP---HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK 149 (319)
T ss_dssp CCCCTTGGGGTTCCCTTBCCCCE-EEECSS---CEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCEeEEEE-EEecCC---ceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 34557888999999999999999 554443 57999999 78999999976666799999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+|||++ ++.++|+|||++...+..... .
T Consensus 150 ~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~--------------------------------~---------- 186 (319)
T 2y4i_B 150 GILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG--------------------------------R---------- 186 (319)
T ss_dssp TCCCCCCCSTTEEEC---CCEECCCSCCC---------------------------------------------------
T ss_pred CccccCCChhhEEEe-CCCEEEeecCCcccccccccc--------------------------------c----------
Confidence 999999999999997 689999999987433211000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC---------CCCCcc
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---------APVSCA 291 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---------~~~s~~ 291 (720)
.........||+.|+|||++.+ ..++.+
T Consensus 187 -------------------------------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~ 223 (319)
T 2y4i_B 187 -------------------------------------------REDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKH 223 (319)
T ss_dssp --------------------------------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHH
T ss_pred -------------------------------------------cccccccCCCcccccChHHhhhccccccccccCCCch
Confidence 0000011368999999999975 347899
Q ss_pred ccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 292 SDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 292 sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||||||++|||++ ||...... .....+.....+......+ +...+|+.+||+.||.+|||+.++++
T Consensus 224 ~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 295 (319)
T 2y4i_B 224 SDVFALGTIWYELHAREWPFKTQPAE-AIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMD 295 (319)
T ss_dssp HHHHHHHHHHHHHHHSSCSSSSCCHH-HHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 999999999999999 67655443 3334444444443333233 45569999999999999999999986
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-31 Score=285.09 Aligned_cols=205 Identities=18% Similarity=0.248 Sum_probs=157.7
Q ss_pred eeeehhhhcccCC--CCCceecccceeecCCCCCcEEEEEec-CC-CCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEW-GD-VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~--HpnIV~l~~~~~~~~~~~~~~~lv~E~-~g-gsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++.++. ||||+++++ ++.... .++++||+ .+ ++|.+++.... .+++..++.++.||+.||.|||
T Consensus 92 ~~~~E~~~l~~l~~~~~~i~~~~~-~~~~~~---~~~lv~e~~~~~~~L~~~l~~~~-~l~~~~~~~i~~qi~~~L~~LH 166 (320)
T 3a99_A 92 RVPMEVVLLKKVSSGFSGVIRLLD-WFERPD---SFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHCH 166 (320)
T ss_dssp EEEHHHHHHHHHCSSSCSBCCEEE-EEECSS---EEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhccCCCCceEEEE-EEecCC---cEEEEEEcCCCCccHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 4456777888886 599999999 555443 57999999 44 89999995543 4999999999999999999999
Q ss_pred HcCceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 139 SQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
++||+||||||+|||++ .++.+||+|||++.......
T Consensus 167 ~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~------------------------------------------ 204 (320)
T 3a99_A 167 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV------------------------------------------ 204 (320)
T ss_dssp HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSC------------------------------------------
T ss_pred HCCcEeCCCCHHHEEEeCCCCCEEEeeCcccccccccc------------------------------------------
Confidence 99999999999999999 78899999988874321100
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchh
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYR 296 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwS 296 (720)
.....||+.|+|||++.+..+ +.++||||
T Consensus 205 --------------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~s 234 (320)
T 3a99_A 205 --------------------------------------------------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 234 (320)
T ss_dssp --------------------------------------------------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHH
T ss_pred --------------------------------------------------ccCCCCCccCCChHHhccCCCCCccchHHh
Confidence 001358999999999987765 78999999
Q ss_pred hhhhhhhccccCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 297 LGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 297 LGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|||++|||+++..++....... ..... +.... +...+||.+||+.||.+|||+.|+++||||+....+
T Consensus 235 lG~il~el~~g~~pf~~~~~~~---~~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~~ 303 (320)
T 3a99_A 235 LGILLYDMVCGDIPFEHDEEII---RGQVF---FRQRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLP 303 (320)
T ss_dssp HHHHHHHHHHSSCSCCSHHHHH---HCCCC---CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCCCH
T ss_pred HHHHHHHHHHCCCCCCChhhhh---ccccc---ccccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCccCc
Confidence 9999999999333322222111 11111 11223 344599999999999999999999999999987543
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.6e-32 Score=292.17 Aligned_cols=211 Identities=13% Similarity=0.096 Sum_probs=156.4
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceec
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVH 145 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHr 145 (720)
+|..++..++||||+++++.+.........+|+||||.|++|.+++...+ .+++.+++.|+.||+.||.|||++||+||
T Consensus 97 ~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~ 175 (345)
T 2v62_A 97 KKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIHENEYVHG 175 (345)
T ss_dssp HHHHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred HHHHhhccccccCcceeecccccccCCCcEEEEEEeccCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCC
Confidence 56677888999999999995544333344789999999999999995544 59999999999999999999999999999
Q ss_pred cCCCCcEEEccCC--ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 146 NVRPSCFVMSSFN--HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 146 DLKP~NILl~~~~--~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||+|||++.++ .+||+|||+++........ ..+
T Consensus 176 Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~------------------------------~~~------------- 212 (345)
T 2v62_A 176 DIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNH------------------------------KQY------------- 212 (345)
T ss_dssp CCSGGGEEEESSSTTSEEECCCTTCEESSGGGCC------------------------------CCC-------------
T ss_pred CcCHHHEEEccCCCCcEEEEeCCCceeccccccc------------------------------ccc-------------
Confidence 9999999999877 9999999988543211000 000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.........||+.|+|||++.+..++.++|||||||++||
T Consensus 213 ----------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~e 252 (345)
T 2v62_A 213 ----------------------------------------QENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLR 252 (345)
T ss_dssp ----------------------------------------CCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------hhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHH
Confidence 0000012478999999999999989999999999999999
Q ss_pred ccc---cCCCCchHHHHH---HHhhcCCCCccccc-----cCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC---PFSTGEEKTRTM---SSLRHRVLPPQLLL-----KFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~---~~l~~~~~p~~~~~-----~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||.......... .......+++.+.. .+| ...+|+.+||..||.+||++.+|++
T Consensus 253 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 321 (345)
T 2v62_A 253 WLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK 321 (345)
T ss_dssp HHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 999 664321111111 11111223332211 333 4559999999999999999999986
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.4e-31 Score=277.06 Aligned_cols=202 Identities=15% Similarity=0.179 Sum_probs=158.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++.+++||||+++++ ++.... .++++||| .+++|.+++......+++..++.++.||+.||.|||++||+
T Consensus 51 ~~e~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 126 (267)
T 3t9t_A 51 IEEAEVMMKLSHPKLVQLYG-VCLEQA---PICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 126 (267)
T ss_dssp HHHHHHHHTCCCTTBCCEEE-EECSSS---SCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEccCC---CeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 46778999999999999999 554443 57999999 78999999976656699999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+||+++.++.++|+|||.+....... .
T Consensus 127 H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~----------------------------------~------------- 159 (267)
T 3t9t_A 127 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ----------------------------------Y------------- 159 (267)
T ss_dssp CSSCCGGGEEECGGGCEEECCTTGGGGBCCHH----------------------------------H-------------
T ss_pred cCCCchheEEECCCCCEEEccccccccccccc----------------------------------c-------------
Confidence 99999999999999999999998874321100 0
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
. ......||+.|+|||++.+..++.++|||||||++|+
T Consensus 160 -----------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ 197 (267)
T 3t9t_A 160 -----------------------T-------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE 197 (267)
T ss_dssp -----------------------H-------------------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred -----------------------c-------------------ccccccccccccChhhhcCCCccchhchhhhHHHHHH
Confidence 0 0001356889999999998889999999999999999
Q ss_pred ccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 304 LFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 304 Llt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++ ||...... .....+.....+.......+...+|+.+||+.||.+|||+.++++
T Consensus 198 l~~~g~~p~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~ 257 (267)
T 3t9t_A 198 VFSEGKIPYENRSNS-EVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLR 257 (267)
T ss_dssp HHTTSCCTTTTCCHH-HHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HhccCCCCCCCCCHH-HHHHHHhcCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 998 55544333 344444444322222223344569999999999999999999986
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=8.9e-32 Score=285.63 Aligned_cols=208 Identities=20% Similarity=0.224 Sum_probs=160.7
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCC---------------CCCHHHHHH
Q 004998 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKR---------------SVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~---------------~l~~~~~~~ 125 (720)
+..+|..++.++ +||||+++++ ++.... ..++++||| .+++|.+++..... .+++..++.
T Consensus 76 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (316)
T 2xir_A 76 ALMSELKILIHIGHHLNVVNLLG-ACTKPG--GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLIC 152 (316)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECCTT--SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHH
T ss_pred HHHHHHHHHHhcccCCCeeeEEE-EEecCC--CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHH
Confidence 344778888888 7999999999 443332 247999999 88999999965432 289999999
Q ss_pred HHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcc
Q 004998 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+||+++.++.+||+|||.+.......
T Consensus 153 ~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~------------------------------ 202 (316)
T 2xir_A 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP------------------------------ 202 (316)
T ss_dssp HHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT------------------------------
T ss_pred HHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccCc------------------------------
Confidence 99999999999999999999999999999999999999998885432110
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC
Q 004998 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
.. .......||+.|+|||++.+
T Consensus 203 ---~~-------------------------------------------------------~~~~~~~~t~~y~aPE~~~~ 224 (316)
T 2xir_A 203 ---DY-------------------------------------------------------VRKGDARLPLKWMAPETIFD 224 (316)
T ss_dssp ---TS-------------------------------------------------------EEETTEEECGGGCCHHHHHH
T ss_pred ---cc-------------------------------------------------------eeccCCCcceeecCchhhcc
Confidence 00 00011357899999999998
Q ss_pred CCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
..++.++|||||||++|||++ ||............+.....++......+...+|+.+||+.||.+|||+.|+++|
T Consensus 225 ~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 304 (316)
T 2xir_A 225 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304 (316)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 889999999999999999997 6655443334444444443333322334556699999999999999999999974
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=3e-31 Score=285.16 Aligned_cols=206 Identities=13% Similarity=0.146 Sum_probs=157.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+++|||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 92 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 167 (333)
T 1mqb_A 92 DFLGEAGIMGQFSHHNIIRLEG-VISKYK---PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN 167 (333)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECSSS---SEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEecCC---CcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 554433 68999999 788999999766566999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+......... .+
T Consensus 168 ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------~~----------- 205 (333)
T 1mqb_A 168 YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA-------------------------------TY----------- 205 (333)
T ss_dssp CCCSCCCGGGEEECTTCCEEECCCCC------------------------------------------------------
T ss_pred eeCCCCChheEEECCCCcEEECCCCcchhhcccccc-------------------------------cc-----------
Confidence 999999999999999999999999988443211000 00
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 206 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 240 (333)
T 1mqb_A 206 ---------------------------------------------TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVM 240 (333)
T ss_dssp --------------------------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccCCCCccccccCchhcccCCCCchhhhHHHHHHH
Confidence 00012468899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... ..+..+..+..++......+...+|+.+||+.||.+||++.++++
T Consensus 241 ~ellt~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 302 (333)
T 1mqb_A 241 WEVMTYGERPYWELSNH-EVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 302 (333)
T ss_dssp HHHHTTSCCTTTTCCHH-HHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHcCCCCCcccCCHH-HHHHHHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99987 66554433 344445444333332223344559999999999999999999986
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-32 Score=289.42 Aligned_cols=207 Identities=17% Similarity=0.235 Sum_probs=154.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---CCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---RSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..+|..++||||+++++ ++.... .+|+|||| .+++|.+++.... ..+++..++.++.||+.||.|||
T Consensus 81 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 156 (321)
T 2qkw_B 81 EFETEIETLSFCRHPHLVSLIG-FCDERN---EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH 156 (321)
T ss_dssp HHHHHHHGGGSCCCTTBCCEEE-ECCCTT---CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEcCCC---eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc
Confidence 3447888999999999999999 554443 56999999 8899999994432 34899999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+||+++.++.+||+|||++.........
T Consensus 157 ~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----------------------------------------- 195 (321)
T 2qkw_B 157 TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQT----------------------------------------- 195 (321)
T ss_dssp HTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCC-----------------------------------------
T ss_pred CCCeecCCCCHHHEEECCCCCEEEeeccccccccccccc-----------------------------------------
Confidence 999999999999999999999999999887432111000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.......||+.|+|||++.+..++.++||||||
T Consensus 196 -----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG 228 (321)
T 2qkw_B 196 -----------------------------------------------HLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFG 228 (321)
T ss_dssp -----------------------------------------------CCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHH
T ss_pred -----------------------------------------------ccccccCCCccccCHHHhcCCCCCcccchHhHH
Confidence 000113689999999999888899999999999
Q ss_pred hhhhhccc---cCCCCchH------HHHHHHhhcC----CCCccccccC-----chHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 299 VLLFELFC---PFSTGEEK------TRTMSSLRHR----VLPPQLLLKF-----PKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~------~~~~~~l~~~----~~p~~~~~~~-----p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|||++ ||...... .......... ...+.+.... +...+|+.+||+.||++|||+.|+++
T Consensus 229 ~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 308 (321)
T 2qkw_B 229 VVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLW 308 (321)
T ss_dssp HHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 99999999 55432211 0001111111 1112211111 23349999999999999999999996
Q ss_pred C
Q 004998 361 S 361 (720)
Q Consensus 361 h 361 (720)
+
T Consensus 309 ~ 309 (321)
T 2qkw_B 309 K 309 (321)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.7e-32 Score=282.96 Aligned_cols=200 Identities=16% Similarity=0.127 Sum_probs=151.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..++.+++||||+++++.++.... .+|+|||| .+++|.+++.... ..+++..++.++.||+.||.|||++|
T Consensus 61 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 137 (278)
T 1byg_A 61 FLAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN 137 (278)
T ss_dssp HHHTHHHHTTCCCTTBCCEEEEECCC-----CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCEeeEEEEEEcCCC---ceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3467889999999999999994333332 46999999 7889999995432 23799999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+...+..
T Consensus 138 i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~----------------------------------------------- 170 (278)
T 1byg_A 138 FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----------------------------------------------- 170 (278)
T ss_dssp CCCSCCSGGGEEECTTSCEEECCCCC------------------------------------------------------
T ss_pred ccccCCCcceEEEeCCCcEEEeecccccccccc-----------------------------------------------
Confidence 999999999999999999999999877322110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+++.|+|||++.+..++.++|||||||++
T Consensus 171 ----------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 204 (278)
T 1byg_A 171 ----------------------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILL 204 (278)
T ss_dssp ---------------------------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ----------------------------------------------ccCCCccccccCHHHhCCCCCCchhcHHHHHHHH
Confidence 0002468889999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 205 ~~l~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 266 (278)
T 1byg_A 205 WEIYSFGRVPYPRIPLK-DVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE 266 (278)
T ss_dssp HHHHTTSCCSCTTSCGG-GHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence 99997 56544332 333344433222222223344559999999999999999999985
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-31 Score=287.10 Aligned_cols=208 Identities=17% Similarity=0.134 Sum_probs=157.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++++.++ .. ....+|+|||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 71 ~~~E~~~l~~l~h~~i~~~~~~~~-~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i 148 (327)
T 3lxl_A 71 FQREIQILKALHSDFIVKYRGVSY-GP-GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC 148 (327)
T ss_dssp HHHHHHHHHTCCCTTBCCEEEEEE-CS-SSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCceeEEEEEEe-cC-CCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 447888999999999999999433 22 22368999999 7999999996544459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.+...+.... ..
T Consensus 149 vH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------~~----------- 184 (327)
T 3lxl_A 149 VHRDLAARNILVESEAHVKIADFGLAKLLPLDKD---------------------------------YY----------- 184 (327)
T ss_dssp ECSCCSGGGEEEEETTEEEECCGGGCEECCTTCS---------------------------------EE-----------
T ss_pred cCCCCChhhEEECCCCCEEEcccccceecccCCc---------------------------------cc-----------
Confidence 9999999999999999999999998854322100 00
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.......||+.|+|||++.+..++.++|||||||++|
T Consensus 185 -------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 221 (327)
T 3lxl_A 185 -------------------------------------------VVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLY 221 (327)
T ss_dssp -------------------------------------------ECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHH
T ss_pred -------------------------------------------eeeccCCccccccCHHHhccCCCChHHhHHHHHHHHH
Confidence 0001135789999999999888999999999999999
Q ss_pred hccc---cCCCCchH--------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC---PFSTGEEK--------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt---pf~~~~~~--------------~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|++ ||...... ......+.....++......+...+|+.+||++||.+|||+.|+++
T Consensus 222 ~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 296 (327)
T 3lxl_A 222 ELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGP 296 (327)
T ss_dssp HHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999 44322111 1222233333333332233344559999999999999999999975
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=2.1e-31 Score=283.94 Aligned_cols=206 Identities=14% Similarity=0.102 Sum_probs=159.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------CCCCCHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------KRSVDVYECLHIFRQIVE 132 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------~~~l~~~~~~~i~~QIl~ 132 (720)
+..+|..++.+++||||+++++ ++.+.. .+++|||| .+++|.+++... ...+++..++.++.||+.
T Consensus 74 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 149 (322)
T 1p4o_A 74 EFLNEASVMKEFNCHHVVRLLG-VVSQGQ---PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 149 (322)
T ss_dssp HHHHHHHHGGGCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEeeeEE-EEccCC---ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHH
Confidence 3447888999999999999999 554443 56999999 789999999432 134799999999999999
Q ss_pred HHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccc
Q 004998 133 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 133 aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
||.|||++||+||||||+||+++.++.+||+|||++...... +.
T Consensus 150 ~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~----------------------------------~~-- 193 (322)
T 1p4o_A 150 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET----------------------------------DY-- 193 (322)
T ss_dssp HHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGG----------------------------------GC--
T ss_pred HHHHHHHCCCccCCCccceEEEcCCCeEEECcCccccccccc----------------------------------cc--
Confidence 999999999999999999999999999999999887322100 00
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccc
Q 004998 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 292 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~s 292 (720)
........||+.|+|||++.+..++.++
T Consensus 194 ----------------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~ 221 (322)
T 1p4o_A 194 ----------------------------------------------------YRKGGKGLLPVRWMSPESLKDGVFTTYS 221 (322)
T ss_dssp ----------------------------------------------------EEGGGSSEECGGGCCHHHHHHCCCCHHH
T ss_pred ----------------------------------------------------cccccCCCCCCCccChhhhccCCCCchh
Confidence 0000113578999999999988899999
Q ss_pred cchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 293 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 293 DIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.|++++
T Consensus 222 Di~slG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~ 293 (322)
T 1p4o_A 222 DVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293 (322)
T ss_dssp HHHHHHHHHHHHHHTSCCTTTTSCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCccccCCHH-HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 99999999999998 55554433 3444444443333333333445699999999999999999999974
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-31 Score=277.71 Aligned_cols=203 Identities=18% Similarity=0.167 Sum_probs=157.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..++.+++||||+++++ ++.+.. .+|+|||| .|++|.+++.. ....+++..++.++.||+.||.|||++|
T Consensus 56 ~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ 131 (288)
T 3kfa_A 56 FLKEAAVMKEIKHPNLVQLLG-VCTREP---PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 131 (288)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSSS---SEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEccCC---CEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC
Confidence 346788999999999999999 554443 57999999 88999999954 3455999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.++|+|||.+.........
T Consensus 132 i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~-------------------------------------------- 167 (288)
T 3kfa_A 132 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-------------------------------------------- 167 (288)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSE--------------------------------------------
T ss_pred ccCCCCCcceEEEcCCCCEEEccCccceeccCCccc--------------------------------------------
Confidence 999999999999999999999999887443211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 168 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 202 (288)
T 3kfa_A 168 ---------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL 202 (288)
T ss_dssp ---------------------------------------------EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccCCccccCcCChhhhccCCCCchhhHHHHHHHH
Confidence 00013568899999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+.....++......+...+|+.+||.+||.+|||+.++++
T Consensus 203 ~~ll~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~ 264 (288)
T 3kfa_A 203 WEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 264 (288)
T ss_dssp HHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence 99998 55443332 233333333222222223344559999999999999999999985
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.3e-31 Score=281.40 Aligned_cols=208 Identities=13% Similarity=0.071 Sum_probs=154.7
Q ss_pred eeehhhhcccCCCCCceecccceeecCC-CCCcEEEEEec-CCCCHHHHHh-----CCCCCCCHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEA-AIDPFVHAIEW-GDVSLRQWLD-----KPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~-~~~~~~lv~E~-~ggsL~~~L~-----~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
..+|..++.+++||||+++++.+..... .....+++||| .+++|.+++. .....+++..++.++.||+.||.|
T Consensus 83 ~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~ 162 (313)
T 3brb_A 83 FLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEY 162 (313)
T ss_dssp HHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHH
Confidence 4478889999999999999994433222 22357999999 8899999983 233559999999999999999999
Q ss_pred HHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 137 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
||++||+||||||+||+++.++.+||+|||++.........
T Consensus 163 LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------------- 203 (313)
T 3brb_A 163 LSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYY--------------------------------------- 203 (313)
T ss_dssp HHTTTCCCCCCSGGGEEECTTSCEEECSCSCC------------------------------------------------
T ss_pred HHhCCcccCCCCcceEEEcCCCcEEEeecCcceeccccccc---------------------------------------
Confidence 99999999999999999999999999999987432111000
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchh
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwS 296 (720)
.......+++.|+|||.+.+..++.++||||
T Consensus 204 -------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s 234 (313)
T 3brb_A 204 -------------------------------------------------RQGRIAKMPVKWIAIESLADRVYTSKSDVWA 234 (313)
T ss_dssp --------------------------------------------------------CCGGGSCHHHHHSSCCCHHHHHHH
T ss_pred -------------------------------------------------CcccccCCCccccCchhhcCCCccchhhhHH
Confidence 0001135688999999999988999999999
Q ss_pred hhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 297 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 297 LGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++|+|++ ||...... .....+.....++......+...+|+.+||..||.+|||+.++++
T Consensus 235 lG~il~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 301 (313)
T 3brb_A 235 FGVTMWEIATRGMTPYPGVQNH-EMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRL 301 (313)
T ss_dssp HHHHHHHHHTTSCCSSTTCCGG-GHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHhcCCCCCccCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999999998 55544333 333334444333333333345569999999999999999999986
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-31 Score=287.90 Aligned_cols=205 Identities=16% Similarity=0.186 Sum_probs=157.4
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-------------CCCCCHHHHHHHHH
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-------------KRSVDVYECLHIFR 128 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-------------~~~l~~~~~~~i~~ 128 (720)
..+|..+|.++ +||||+++++ ++.... .+|+|||| .+++|.+++... ...+++..++.++.
T Consensus 96 ~~~E~~~l~~l~~h~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (333)
T 2i1m_A 96 LMSELKIMSHLGQHENIVNLLG-ACTHGG---PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS 171 (333)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCCCeeeEEE-EEecCC---ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHH
Confidence 34788889999 8999999999 555443 57999999 888999999432 33589999999999
Q ss_pred HHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccc
Q 004998 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 172 qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~--------------------------------- 218 (333)
T 2i1m_A 172 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDS--------------------------------- 218 (333)
T ss_dssp HHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCT---------------------------------
T ss_pred HHHHHHHHHhcCCcccCCcccceEEECCCCeEEECcccccccccccc---------------------------------
Confidence 99999999999999999999999999999999999998874321110
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC
Q 004998 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 288 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 288 (720)
.. .......||+.|+|||++.+..+
T Consensus 219 ~~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~ 243 (333)
T 2i1m_A 219 NY-------------------------------------------------------IVKGNARLPVKWMAPESIFDCVY 243 (333)
T ss_dssp TS-------------------------------------------------------EECSSCEECGGGSCHHHHHHCCC
T ss_pred ce-------------------------------------------------------eecCCCCCCccccCHHHhccCCC
Confidence 00 00011356889999999998889
Q ss_pred Cccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 289 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 289 s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+.++|||||||++|||++ ||............+.....++......+...+|+.+||+.||.+|||+.++++
T Consensus 244 ~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 319 (333)
T 2i1m_A 244 TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 319 (333)
T ss_dssp CHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 999999999999999997 666544333333334333322222222344559999999999999999999986
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-31 Score=299.18 Aligned_cols=206 Identities=14% Similarity=0.161 Sum_probs=157.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.+++||||+++++ ++..+ .+|+|||| .+++|.++|.. .+..+++.+++.++.||+.||.|||++||
T Consensus 227 ~~E~~~l~~l~hp~iv~~~~-~~~~~----~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i 301 (452)
T 1fmk_A 227 LQEAQVMKKLRHEKLVQLYA-VVSEE----PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 301 (452)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEcCC----ceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 47888999999999999999 55442 47999999 88999999943 23458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||+++........
T Consensus 302 vHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~--------------------------------------------- 336 (452)
T 1fmk_A 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYT--------------------------------------------- 336 (452)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCCTTC-----------------------------------------------------
T ss_pred eCCCCChhhEEECCCCCEEECCCccceecCCCcee---------------------------------------------
Confidence 99999999999999999999999887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......+|+.|+|||++.+..++.++|||||||++|
T Consensus 337 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~ 372 (452)
T 1fmk_A 337 --------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 372 (452)
T ss_dssp --------------------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred --------------------------------------------cccCCcccccccCHhHHhcCCCCccccHHhHHHHHH
Confidence 000124678899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc--CcccCC
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ--SEFLNE 366 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~--hp~~~~ 366 (720)
||++ ||...... .....+..+..++. +..+|. ..+||.+||+.||.+|||+.++++ ..++..
T Consensus 373 el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 373 ELTTKGRVPYPGMVNR-EVLDQVERGYRMPC-PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp HHHTTTCCSSTTCCHH-HHHHHHHTTCCCCC-CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 9998 66655443 34444444433332 233444 559999999999999999999986 344443
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.9e-31 Score=276.70 Aligned_cols=204 Identities=13% Similarity=0.115 Sum_probs=158.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++..++||||+++++ ++..+ .+|+|||| .+++|.+++.... .+++..++.++.||+.||.|||++|
T Consensus 64 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~----~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ 137 (291)
T 1xbb_A 64 ELLAEANVMQQLDNPYIVRMIG-ICEAE----SWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEESN 137 (291)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEESS----SEEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EECCC----CcEEEEEeCCCCCHHHHHHhCc-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 55332 57999999 8899999996543 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+......... .
T Consensus 138 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 174 (291)
T 1xbb_A 138 FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY--------------------------------Y----------- 174 (291)
T ss_dssp EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE--------------------------------E-----------
T ss_pred eEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc--------------------------------c-----------
Confidence 999999999999999999999999987443221000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......+|+.|+|||++.+..++.++|||||||++
T Consensus 175 ------------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 210 (291)
T 1xbb_A 175 ------------------------K--------------------AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM 210 (291)
T ss_dssp ------------------------E--------------------C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred ------------------------c--------------------ccccCCCCceeeChHHhccCCCChhhhHHHHHHHH
Confidence 0 00012467899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+.....++......+...+||.+||+.||.+||++.++++
T Consensus 211 ~~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 272 (291)
T 1xbb_A 211 WEAFSYGQKPYRGMKGS-EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 272 (291)
T ss_dssp HHHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHhcCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99997 66554433 344444444333322223344559999999999999999999985
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.3e-31 Score=284.00 Aligned_cols=207 Identities=17% Similarity=0.117 Sum_probs=156.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.+.. ...+++|||| .+++|.+++.... +++.+++.++.||+.||.|||++|
T Consensus 79 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~i~~~l~~~l~~LH~~~ 154 (318)
T 3lxp_A 79 GWKQEIDILRTLYHEHIIKYKG-CCEDAG-AASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQH 154 (318)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEEETT-TTEEEEEECCCTTCBHHHHGGGSC--CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCcchhhEEE-EEecCC-CceEEEEEecccCCcHHHHHhhCC--CCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 554432 2368999999 7899999996543 999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||.+......... +
T Consensus 155 ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~--------------------------------~----------- 191 (318)
T 3lxp_A 155 YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY--------------------------------Y----------- 191 (318)
T ss_dssp EECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSE--------------------------------E-----------
T ss_pred ccCCCCchheEEEcCCCCEEECCccccccccccccc--------------------------------c-----------
Confidence 999999999999999999999999887443211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 192 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 227 (318)
T 3lxp_A 192 --------------------------------------------RVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL 227 (318)
T ss_dssp --------------------------------------------EC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHH
Confidence 000113578899999999988899999999999999
Q ss_pred hhccc---cCCCCchH--------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC---PFSTGEEK--------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~--------------~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... ......+.....++......+...+||.+||+.||.+|||+.|+++
T Consensus 228 ~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~ 303 (318)
T 3lxp_A 228 YELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP 303 (318)
T ss_dssp HHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 99999 44332111 1112222223333322223344569999999999999999999985
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.4e-31 Score=278.84 Aligned_cols=205 Identities=16% Similarity=0.095 Sum_probs=157.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++... .++++||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 67 ~~~~e~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 141 (291)
T 1u46_A 67 DFIREVNAMHSLDHRNLIRLYG-VVLTP----PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 141 (291)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCcccEEE-EEccC----CceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 55443 26899999 889999999655455999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+......... .
T Consensus 142 i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--------------------------------~----------- 178 (291)
T 1u46_A 142 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH--------------------------------Y----------- 178 (291)
T ss_dssp EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCE--------------------------------E-----------
T ss_pred cccCCCchheEEEcCCCCEEEccccccccccccccc--------------------------------h-----------
Confidence 999999999999999999999999987443211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......+|+.|+|||++.+..++.++|||||||++
T Consensus 179 --------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 214 (291)
T 1u46_A 179 --------------------------------------------VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 214 (291)
T ss_dssp --------------------------------------------EC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred --------------------------------------------hhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHH
Confidence 000013568899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+|++ ||...... .....+............++ ...+|+.+||+.||.+|||+.++++
T Consensus 215 ~~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 277 (291)
T 1u46_A 215 WEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 277 (291)
T ss_dssp HHHHTTSCCTTTTCCHH-HHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCcccCCHH-HHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 99997 56555443 33333433322222233344 4559999999999999999999986
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-31 Score=286.06 Aligned_cols=210 Identities=14% Similarity=0.141 Sum_probs=159.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC------CCCCHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK------RSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~------~~l~~~~~~~i~~QIl~aL~ 135 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .|++|.+++.... ..+++.+++.++.||+.||.
T Consensus 79 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~ 154 (327)
T 2yfx_A 79 DFLMEALIISKFNHQNIVRCIG-VSLQSL---PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154 (327)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCCCeEEE-EEcCCC---CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHH
Confidence 4447888999999999999999 554443 46999999 7999999995432 34899999999999999999
Q ss_pred HHHHcCceeccCCCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccc
Q 004998 136 AAHSQGIVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 136 yLHs~gIvHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
|||++||+||||||+|||++. ...++|+|||.+........ .
T Consensus 155 ~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~---------------------------------~-- 199 (327)
T 2yfx_A 155 YLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASY---------------------------------Y-- 199 (327)
T ss_dssp HHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC---------------------------------------
T ss_pred HHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccc---------------------------------c--
Confidence 999999999999999999984 44699988887732110000 0
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccc
Q 004998 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 292 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~s 292 (720)
.......||+.|+|||++.+..++.++
T Consensus 200 -----------------------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~ 226 (327)
T 2yfx_A 200 -----------------------------------------------------RKGGCAMLPVKWMPPEAFMEGIFTSKT 226 (327)
T ss_dssp -------------------------------------------------------CCGGGSCGGGCCHHHHHHCCCCHHH
T ss_pred -----------------------------------------------------ccCCCcCCCcceeCHhHhcCCCCCchh
Confidence 000114678999999999888899999
Q ss_pred cchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 293 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 293 DIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
|||||||++|+|++ ||...... .....+.....++......+...+||.+||+.||.+||++.+++++.++.
T Consensus 227 Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~ 302 (327)
T 2yfx_A 227 DTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 302 (327)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCCCcCHH-HHHHHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 99999999999997 55544333 33444444333322222334455999999999999999999999976643
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.3e-31 Score=304.10 Aligned_cols=204 Identities=14% Similarity=0.113 Sum_probs=158.9
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++|||||++++ ++..+ .+|+|||| .+++|.++|......+++..++.|+.||+.||.|||++||
T Consensus 383 ~~~E~~il~~l~hpniv~l~~-~~~~~----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i 457 (613)
T 2ozo_A 383 MMREAQIMHQLDNPYIVRLIG-VCQAE----ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 457 (613)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EEESS----SEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EeccC----CeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 347888999999999999999 55543 48999999 8999999996666679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+|||++.++.+||+|||+++..+..... +
T Consensus 458 iHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~--------------------------------~------------ 493 (613)
T 2ozo_A 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY--------------------------------Y------------ 493 (613)
T ss_dssp CCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------------------------------------------
T ss_pred EcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce--------------------------------e------------
Confidence 99999999999999999999999988543221000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.......+|+.|+|||++.+..++.++|||||||+||
T Consensus 494 -------------------------------------------~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ 530 (613)
T 2ozo_A 494 -------------------------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMW 530 (613)
T ss_dssp ---------------------------------------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred -------------------------------------------eeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHH
Confidence 0000124578999999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... ..+..+..+..++......+...+||.+||+.||.+||++.+|++
T Consensus 531 ellt~G~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~ 591 (613)
T 2ozo_A 531 EALSYGQKPYKKMKGP-EVMAFIEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQ 591 (613)
T ss_dssp HHHTTSCCTTTTCCSH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred HHHHCCCCCCCCCCHH-HHHHHHHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 9997 67665443 344445444333322223344559999999999999999999874
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=99.97 E-value=6.8e-31 Score=281.41 Aligned_cols=208 Identities=13% Similarity=0.146 Sum_probs=150.4
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc---
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ--- 140 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~--- 140 (720)
+.+...+..++||||+++++.+.........+|+|||| .+++|.+++... .+++..++.++.||+.||.|||++
T Consensus 79 e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~ 156 (337)
T 3mdy_A 79 ETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLHTEIFS 156 (337)
T ss_dssp HHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHSCBCS
T ss_pred HHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 34444555569999999999444443333578999999 789999999654 399999999999999999999998
Q ss_pred -----CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 141 -----GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 141 -----gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
||+||||||+|||++.++.+||+|||++.........
T Consensus 157 ~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-------------------------------------- 198 (337)
T 3mdy_A 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNE-------------------------------------- 198 (337)
T ss_dssp TTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC-------------------------------------------
T ss_pred hccCCCEEecccchHHEEECCCCCEEEEeCCCceeecccccc--------------------------------------
Confidence 9999999999999999999999999988443221000
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcc----
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCA---- 291 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~---- 291 (720)
.........||+.|+|||++.+..++..
T Consensus 199 ------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~ 230 (337)
T 3mdy_A 199 ------------------------------------------------VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSY 230 (337)
T ss_dssp ----------------------------------------------------CCSSCSCGGGCCHHHHTTCCCTTCTHHH
T ss_pred ------------------------------------------------ccCCCCCCccCcceeChhhcccccCCccccCc
Confidence 0000011478999999999988776555
Q ss_pred --ccchhhhhhhhhcccc-------------CCCC----chHHHHHHHhhcCCCCccccc-----cC-chHHHHHHHcCC
Q 004998 292 --SDIYRLGVLLFELFCP-------------FSTG----EEKTRTMSSLRHRVLPPQLLL-----KF-PKEASFCLWLLH 346 (720)
Q Consensus 292 --sDIwSLGvll~eLltp-------------f~~~----~~~~~~~~~l~~~~~p~~~~~-----~~-p~~~~li~~~L~ 346 (720)
+|||||||++|||+++ |... .........+......+.+.. .. +...+|+.+||+
T Consensus 231 ~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~ 310 (337)
T 3mdy_A 231 IMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWA 310 (337)
T ss_dssp HHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSC
T ss_pred cccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhh
Confidence 9999999999999973 2211 111222222222222222222 12 234599999999
Q ss_pred CCCCCCCChHHHHc
Q 004998 347 PEPSGRPKMGELLQ 360 (720)
Q Consensus 347 ~dP~~Rpta~eiL~ 360 (720)
.||.+|||+.++++
T Consensus 311 ~dP~~Rps~~ell~ 324 (337)
T 3mdy_A 311 HNPASRLTALRVKK 324 (337)
T ss_dssp SSGGGSCCHHHHHH
T ss_pred hChhhCCCHHHHHH
Confidence 99999999999986
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-31 Score=278.92 Aligned_cols=204 Identities=17% Similarity=0.233 Sum_probs=153.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..++.+++||||+++++ ++.... .++++||| .+++|.+++.. ....+++..++.++.||+.||.|||
T Consensus 78 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 153 (310)
T 2wqm_A 78 DCIKEIDLLKQLNHPNVIKYYA-SFIEDN---ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153 (310)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEEcCC---cEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh
Confidence 3347888999999999999999 444433 67999999 88899999943 3455999999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++||+||||||+||+++.++.++|+|||++........
T Consensus 154 ~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------------------------------------ 191 (310)
T 2wqm_A 154 SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT------------------------------------------ 191 (310)
T ss_dssp HTTCCCCCCCGGGEEECTTSCEEECCC-----------------------------------------------------
T ss_pred hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc------------------------------------------
Confidence 99999999999999999999999999988743211100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 192 ------------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG 223 (310)
T 2wqm_A 192 ------------------------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLG 223 (310)
T ss_dssp -------------------------------------------------------CCSSCCHHHHTTCCCCHHHHHHHHH
T ss_pred ------------------------------------------------cccccCCCeeEeChHHhCCCCCCchhhHHHHH
Confidence 00013679999999999998899999999999
Q ss_pred hhhhhccc---cCCCCc-hHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 299 VLLFELFC---PFSTGE-EKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 299 vll~eLlt---pf~~~~-~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|++|+|++ ||.... ........+....+++.....++. ..+|+.+||+.||.+|||+.++++
T Consensus 224 ~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~ 290 (310)
T 2wqm_A 224 CLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYD 290 (310)
T ss_dssp HHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 99999999 665432 222334444444455444344444 459999999999999999999986
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=6e-31 Score=279.32 Aligned_cols=206 Identities=18% Similarity=0.271 Sum_probs=153.5
Q ss_pred eeeehhhhcccC----CCCCceecccceeecCCCCCcEEEEEec--CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHG----DHLRNQGGLSGVCENEAAIDPFVHAIEW--GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 63 r~~~e~~~Ls~l----~HpnIV~l~~~~~~~~~~~~~~~lv~E~--~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~y 136 (720)
+..+|..++.++ +||||+++++ ++.... .++++||+ .+++|.+++.... .+++..++.++.||+.||.|
T Consensus 80 ~~~~e~~~l~~l~~~~~h~~i~~~~~-~~~~~~---~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~ 154 (312)
T 2iwi_A 80 TCPLEVALLWKVGAGGGHPGVIRLLD-WFETQE---GFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQH 154 (312)
T ss_dssp CCCHHHHHHHHHHSSCCCSSBCCEEE-EC--------CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcccCCCCCeeeEEE-EEecCC---eEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Confidence 444677777777 8999999999 554443 46899997 6899999995543 49999999999999999999
Q ss_pred HHHcCceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 137 AHSQGIVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
||++||+||||||+||+++ .++.+||+|||.+.......
T Consensus 155 lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~---------------------------------------- 194 (312)
T 2iwi_A 155 CHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP---------------------------------------- 194 (312)
T ss_dssp HHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSC----------------------------------------
T ss_pred HHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCc----------------------------------------
Confidence 9999999999999999999 88999999988874321110
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccc
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDI 294 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDI 294 (720)
.....||+.|+|||++.+..+ +.++||
T Consensus 195 ----------------------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di 222 (312)
T 2iwi_A 195 ----------------------------------------------------YTDFDGTRVYSPPEWISRHQYHALPATV 222 (312)
T ss_dssp ----------------------------------------------------BCCCCSCTTTSCHHHHHHSCBCHHHHHH
T ss_pred ----------------------------------------------------ccccCCcccccCceeeecCCCCCccchH
Confidence 001357999999999987665 569999
Q ss_pred hhhhhhhhhccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCccc
Q 004998 295 YRLGVLLFELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 295 wSLGvll~eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
|||||++|||+++..++......... ...++. ...+...+||.+||+.||.+|||+.|+++||||+.....
T Consensus 223 ~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~~ 293 (312)
T 2iwi_A 223 WSLGILLYDMVCGDIPFERDQEILEA--ELHFPA---HVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAED 293 (312)
T ss_dssp HHHHHHHHHHHHSSCSCCSHHHHHHT--CCCCCT---TSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC----
T ss_pred HHHHHHHHHHHHCCCCCCChHHHhhh--ccCCcc---cCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchhc
Confidence 99999999999943333222221111 111221 123445699999999999999999999999999987543
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=99.97 E-value=9.1e-31 Score=274.95 Aligned_cols=211 Identities=17% Similarity=0.146 Sum_probs=157.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++..+.|++++..+..++.... ..+++|||.+++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 51 ~~~e~~~l~~l~~~~~i~~~~~~~~~~~---~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iv 127 (296)
T 4hgt_A 51 LHIESKIYKMMQGGVGIPTIRWCGAEGD---YNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI 127 (296)
T ss_dssp HHHHHHHHHHHTTSTTCCCEEEEEEETT---EEEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHhcCCCCCCeeeeecCCCC---ceEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 3467778999999999988884444433 6799999999999999975556699999999999999999999999999
Q ss_pred eccCCCCcEEE---ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 144 VHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 144 HrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||+|||+ +.++.+||+|||.+........... .
T Consensus 128 H~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~------------------------------~---------- 167 (296)
T 4hgt_A 128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH------------------------------I---------- 167 (296)
T ss_dssp CSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB------------------------------C----------
T ss_pred cCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCcc------------------------------C----------
Confidence 99999999999 7889999999998854322210000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
. ........||+.|+|||++.+..++.++|||||||+
T Consensus 168 ------------------------------------------~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 204 (296)
T 4hgt_A 168 ------------------------------------------P-YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV 204 (296)
T ss_dssp ------------------------------------------C-CCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred ------------------------------------------C-CCcccccCCCccccchHHhcCCCCCchhHHHHHHHH
Confidence 0 000012478999999999999999999999999999
Q ss_pred hhhccc---cCCCCchH--HHHHHHhhc---CCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 301 LFELFC---PFSTGEEK--TRTMSSLRH---RVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt---pf~~~~~~--~~~~~~l~~---~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||...... ...+..+.. ....+.....+| ...+|+.+||+.||.+|||+.++++
T Consensus 205 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 273 (296)
T 4hgt_A 205 LMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred HHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence 999999 67543211 011111111 111112223334 4459999999999999999999986
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.7e-31 Score=298.47 Aligned_cols=201 Identities=19% Similarity=0.205 Sum_probs=157.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|.+++|||||++++ ++.... .+|+|||| .+++|.++|.. ....+++..++.|+.||+.||.|||++||
T Consensus 264 ~~E~~~l~~l~hpniv~l~~-~~~~~~---~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i 339 (495)
T 1opk_A 264 LKEAAVMKEIKHPNLVQLLG-VCTREP---PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 339 (495)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHhcCCCCEeeEEE-EEecCC---cEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 37888999999999999999 555443 57999999 88999999954 34458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||+++........
T Consensus 340 vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~--------------------------------------------- 374 (495)
T 1opk_A 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT--------------------------------------------- 374 (495)
T ss_dssp ECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE---------------------------------------------
T ss_pred ccCCCChhhEEECCCCcEEEeecccceeccCCcee---------------------------------------------
Confidence 99999999999999999999999887443111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......+++.|+|||++.+..++.++|||||||+||
T Consensus 375 --------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~ 410 (495)
T 1opk_A 375 --------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW 410 (495)
T ss_dssp --------------------------------------------CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred --------------------------------------------ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHH
Confidence 000124578899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+......+. +..+| ...+||.+||+.||.+|||+.+|++
T Consensus 411 el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~el~~ 471 (495)
T 1opk_A 411 EIATYGMSPYPGIDLS-QVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 471 (495)
T ss_dssp HHHTTSCCSSTTCCGG-GHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 9998 66554432 33334443332222 23344 4559999999999999999999986
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-31 Score=296.87 Aligned_cols=202 Identities=13% Similarity=0.135 Sum_probs=157.6
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.+++|||||++++ ++... .+|+|||| .+++|.++|... ...+++..++.++.||+.||.|||++|
T Consensus 230 ~~~E~~~l~~l~h~~iv~l~~-~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ 304 (454)
T 1qcf_A 230 FLAEANVMKTLQHDKLVKLHA-VVTKE----PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 304 (454)
T ss_dssp HHHHHHHHTTCCCTTBCCEEE-EECSS----SCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhhCCCCCEeeEEE-EEeCC----ccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 347888999999999999999 55422 47999999 899999999543 235899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++...... +
T Consensus 305 ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~----------------------------------~----------- 339 (454)
T 1qcf_A 305 YIHRDLRAANILVSASLVCKIADFGLARVIEDNE----------------------------------Y----------- 339 (454)
T ss_dssp CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH----------------------------------H-----------
T ss_pred ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc----------------------------------e-----------
Confidence 9999999999999999999999998874321100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......+|+.|+|||++.+..++.++|||||||+|
T Consensus 340 -------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l 375 (454)
T 1qcf_A 340 -------------------------T-------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILL 375 (454)
T ss_dssp -------------------------H-------------------TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred -------------------------e-------------------ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHH
Confidence 0 00002457889999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+..+..++......+...+||.+||+.||.+|||+.+|+.
T Consensus 376 ~el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~ 437 (454)
T 1qcf_A 376 MEIVTYGRIPYPGMSNP-EVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 437 (454)
T ss_dssp HHHHTTSCCSSTTCCHH-HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 99998 67655443 344444444333332233344559999999999999999999975
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-31 Score=284.54 Aligned_cols=215 Identities=12% Similarity=0.107 Sum_probs=152.1
Q ss_pred eeeeehhhhcccCCCCCceecccceee-cCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 62 LRKHSDGVELTHGDHLRNQGGLSGVCE-NEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~HpnIV~l~~~~~~-~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+.+...+..++||||+++++.+.. .......+|+|||| .+++|.+++.... .++..++.++.||+.||.|||+
T Consensus 52 ~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH~ 129 (336)
T 3g2f_A 52 FINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLHT 129 (336)
T ss_dssp HHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHHh
Confidence 344466666777999999999973322 22223357999999 7999999996544 5899999999999999999999
Q ss_pred c---------CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccc
Q 004998 140 Q---------GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDL 210 (720)
Q Consensus 140 ~---------gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Df 210 (720)
+ ||+||||||+|||++.++.+||+|||++........... ..
T Consensus 130 ~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~----------------------------~~- 180 (336)
T 3g2f_A 130 ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRP----------------------------GE- 180 (336)
T ss_dssp CBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC---------------------------------
T ss_pred hhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCc----------------------------cc-
Confidence 9 999999999999999999999999998854322110000 00
Q ss_pred ccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-----
Q 004998 211 QLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG----- 285 (720)
Q Consensus 211 gla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----- 285 (720)
.........||+.|+|||++.+
T Consensus 181 -----------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ 207 (336)
T 3g2f_A 181 -----------------------------------------------------EDNAAISEVGTIRYMAPEVLEGAVNLR 207 (336)
T ss_dssp ----------------------------------------------------------CCTTSCGGGCCHHHHTTCCCGG
T ss_pred -----------------------------------------------------cccccccCCCccceeCchhhcCCcccc
Confidence 0000112478999999999987
Q ss_pred --CCCCccccchhhhhhhhhccc---cCCCCch-----------------HHHHHHHhhcCCCCccccccCc-------h
Q 004998 286 --APVSCASDIYRLGVLLFELFC---PFSTGEE-----------------KTRTMSSLRHRVLPPQLLLKFP-------K 336 (720)
Q Consensus 286 --~~~s~~sDIwSLGvll~eLlt---pf~~~~~-----------------~~~~~~~l~~~~~p~~~~~~~p-------~ 336 (720)
..++.++|||||||++|||++ ||.+... .......+......+.++..++ .
T Consensus 208 ~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (336)
T 3g2f_A 208 DXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRS 287 (336)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHH
T ss_pred cccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHH
Confidence 346789999999999999997 4332110 1111122222222333333222 3
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 337 EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 337 ~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
..+||.+||+.||++|||+.|+++
T Consensus 288 l~~li~~cl~~dP~~Rps~~e~l~ 311 (336)
T 3g2f_A 288 LKETIEDCWDQDAEARLTAQXAEE 311 (336)
T ss_dssp HHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHhcCChhhCcchHHHHH
Confidence 569999999999999999999965
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=99.97 E-value=7.5e-31 Score=281.78 Aligned_cols=205 Identities=16% Similarity=0.173 Sum_probs=158.7
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHH
Q 004998 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~ 125 (720)
+..+|..++.++ +||||+++++ ++.... .+|+|||| .+++|.+++.... ..+++.+++.
T Consensus 86 ~~~~E~~~l~~l~~hp~iv~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (334)
T 2pvf_A 86 DLVSEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVS 161 (334)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSSS---CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCEeeEEE-EEccCC---ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHH
Confidence 344777888888 8999999999 554443 57999999 8899999995433 2489999999
Q ss_pred HHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcc
Q 004998 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++||+||||||+|||++.++.+||+|||++...+....
T Consensus 162 i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~----------------------------- 212 (334)
T 2pvf_A 162 CTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY----------------------------- 212 (334)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSS-----------------------------
T ss_pred HHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEcccccccccccccc-----------------------------
Confidence 999999999999999999999999999999999999999998743321100
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC
Q 004998 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
+ .......+|+.|+|||++.+
T Consensus 213 ----~-------------------------------------------------------~~~~~~~~~~~y~aPE~~~~ 233 (334)
T 2pvf_A 213 ----Y-------------------------------------------------------KKTTNGRLPVKWMAPEALFD 233 (334)
T ss_dssp ----E-------------------------------------------------------ECCSCCCCCGGGCCHHHHHH
T ss_pred ----c-------------------------------------------------------cccCCCCcccceeChHHhcC
Confidence 0 00001356889999999988
Q ss_pred CCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 286 APVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
..++.++|||||||++|||++ ||...... .....+.....++......+...+|+.+||+.||.+|||+.|+++
T Consensus 234 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 311 (334)
T 2pvf_A 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311 (334)
T ss_dssp CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH-HHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 889999999999999999997 56554332 344444444333333333345569999999999999999999986
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.7e-31 Score=308.42 Aligned_cols=203 Identities=13% Similarity=0.110 Sum_probs=157.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++|||||++++ +++.+ .+++|||| .+++|.++|... ..+++..++.|+.||+.||.|||++||
T Consensus 417 ~~~E~~il~~l~hpnIv~l~~-~~~~~----~~~lv~E~~~~g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH~~~i 490 (635)
T 4fl3_A 417 LLAEANVMQQLDNPYIVRMIG-ICEAE----SWMLVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLEESNF 490 (635)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEESS----SEEEEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCEeeEEE-EEecC----CEEEEEEccCCCCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 337888999999999999999 66543 47899999 899999999554 349999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+||||+.++.+||+|||+++....... +
T Consensus 491 iHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~---------------------------------~------------ 525 (635)
T 4fl3_A 491 VHRDLAARNVLLVTQHYAKISDFGLSKALRADEN---------------------------------Y------------ 525 (635)
T ss_dssp CCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------------------------------------------
T ss_pred eCCCCChHhEEEeCCCCEEEEEcCCccccccCcc---------------------------------c------------
Confidence 9999999999999999999999998854321100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
........||+.|+|||++.+..++.++|||||||++|
T Consensus 526 ------------------------------------------~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ 563 (635)
T 4fl3_A 526 ------------------------------------------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 563 (635)
T ss_dssp ---------------------------------------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred ------------------------------------------cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHH
Confidence 00001134688999999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+..+..++......+...+||.+||+.||.+||++.+|++
T Consensus 564 ellt~G~~Pf~~~~~~-~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~ 624 (635)
T 4fl3_A 564 EAFSYGQKPYRGMKGS-EVTAMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 624 (635)
T ss_dssp HHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 9997 67665443 344444444433332223334459999999999999999999975
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=99.97 E-value=7.2e-31 Score=273.98 Aligned_cols=202 Identities=15% Similarity=0.151 Sum_probs=156.4
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-RSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|.+++||||+++++ ++..+ .++++||| .+++|.+++.... ..+++.+++.++.||+.||.|||++|
T Consensus 55 ~~~E~~~l~~l~h~~i~~~~~-~~~~~----~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 129 (279)
T 1qpc_A 55 FLAEANLMKQLQHQRLVRLYA-VVTQE----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129 (279)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCcCcceEEE-EEcCC----CcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346788999999999999999 55433 46899999 7999999995432 25899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+.........
T Consensus 130 i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------------------- 165 (279)
T 1qpc_A 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-------------------------------------------- 165 (279)
T ss_dssp EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE--------------------------------------------
T ss_pred eeccCCCHhhEEEcCCCCEEECCCcccccccCcccc--------------------------------------------
Confidence 999999999999999999999999887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+|+.|+|||++.+..++.++|||||||++
T Consensus 166 ---------------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 200 (279)
T 1qpc_A 166 ---------------------------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILL 200 (279)
T ss_dssp ---------------------------------------------CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccCCCCccCccChhhhccCCCCchhhhHHHHHHH
Confidence 00013468899999999888899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...... .....+.....+.......+...+|+.+||+.||.+|||+.++++
T Consensus 201 ~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~ 262 (279)
T 1qpc_A 201 TEIVTHGRIPYPGMTNP-EVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262 (279)
T ss_dssp HHHHTTTCCSSTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCcccCHH-HHHHHHhcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 99998 56554433 344444443322222222344559999999999999999999985
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.3e-31 Score=303.62 Aligned_cols=213 Identities=15% Similarity=0.140 Sum_probs=157.3
Q ss_pred eeeehhhhcccCCCCCceecccceeec---CCCCCcEEEEEec-CCCCHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCEN---EAAIDPFVHAIEW-GDVSLRQWLDKPK--RSVDVYECLHIFRQIVEIVYA 136 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~---~~~~~~~~lv~E~-~ggsL~~~L~~~~--~~l~~~~~~~i~~QIl~aL~y 136 (720)
+..+|..+|.+++||||+++++ ++.. .......|+|||| .|++|.+++.... ..+++..++.++.||+.||.|
T Consensus 58 ~~~~Ei~iL~~L~HpnIV~l~~-v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~y 136 (676)
T 3qa8_A 58 RWCLEIQIMKKLNHPNVVSARE-VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRY 136 (676)
T ss_dssp HHHHHHHHHHHCCBTTBCCEEE-CCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCceee-eecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHH
Confidence 3447888999999999999999 4332 1123467999999 7999999996533 358999999999999999999
Q ss_pred HHHcCceeccCCCCcEEEccCCc---eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccc
Q 004998 137 AHSQGIVVHNVRPSCFVMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 137 LHs~gIvHrDLKP~NILl~~~~~---vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
||++||+||||||+||+++.++. ++|+|||.+...+...
T Consensus 137 LHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~-------------------------------------- 178 (676)
T 3qa8_A 137 LHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE-------------------------------------- 178 (676)
T ss_dssp HHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCC--------------------------------------
T ss_pred HHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccccc--------------------------------------
Confidence 99999999999999999997665 8998888774321110
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcccc
Q 004998 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
......||+.|+|||++.+..++.++|
T Consensus 179 -----------------------------------------------------~~~~~~gt~~Y~APE~l~~~~~s~ksD 205 (676)
T 3qa8_A 179 -----------------------------------------------------LCTEFVGTLQYLAPELLEQKKYTVTVD 205 (676)
T ss_dssp -----------------------------------------------------CCCCCCSCCTTCSSCSSCCSCCSTTHH
T ss_pred -----------------------------------------------------ccccccCCcccCChHHhccCCCCchhH
Confidence 001146899999999999989999999
Q ss_pred chhhhhhhhhccc---cCCCCchHHHHHHHhh-------------cC--------CCCccccccCch-HHHHHHHcCCCC
Q 004998 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLR-------------HR--------VLPPQLLLKFPK-EASFCLWLLHPE 348 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~-------------~~--------~~p~~~~~~~p~-~~~li~~~L~~d 348 (720)
||||||++|+|++ ||.+..........+. .+ ..|..+...++. ..+||.+||.+|
T Consensus 206 IwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~D 285 (676)
T 3qa8_A 206 YWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWH 285 (676)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCC
Confidence 9999999999999 6655322211100000 00 001112222333 349999999999
Q ss_pred CCCCCChHHHHcCcccCCC
Q 004998 349 PSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~ 367 (720)
|.+|||+.++|+||||...
T Consensus 286 P~kRPTa~elL~hp~F~~l 304 (676)
T 3qa8_A 286 QRQRGTDPQNPNVGCFQAL 304 (676)
T ss_dssp CC---CCTTCCCCTTHHHH
T ss_pred HhhCcCHHHHhcCHHHHHH
Confidence 9999999999999999875
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-30 Score=272.18 Aligned_cols=211 Identities=18% Similarity=0.157 Sum_probs=156.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++..+.|++++..+..+.... ..++++|||.+++|.+++......+++.+++.++.||+.||.|||++||+
T Consensus 51 ~~~e~~~l~~l~~~~~i~~~~~~~~~~---~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv 127 (296)
T 3uzp_A 51 LHIESKIYKMMQGGVGIPTIRWCGAEG---DYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFI 127 (296)
T ss_dssp HHHHHHHHHHHTTSTTCCCEEEEEEET---TEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHhhcCCCCCccccccCCC---CceEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 346777899999999888887343433 26799999999999999965556699999999999999999999999999
Q ss_pred eccCCCCcEEEc---cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 144 VHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 144 HrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||+|||++ .++.+||+|||.+........... .
T Consensus 128 H~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~------------------------------~---------- 167 (296)
T 3uzp_A 128 HRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH------------------------------I---------- 167 (296)
T ss_dssp CSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB------------------------------C----------
T ss_pred eCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccc------------------------------c----------
Confidence 999999999994 888999999998854322100000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
. ........||+.|+|||++.+..++.++|||||||+
T Consensus 168 ------------------------------------------~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~i 204 (296)
T 3uzp_A 168 ------------------------------------------P-YRENKNLTGTARYASINTHLGIEQSRRDDLESLGYV 204 (296)
T ss_dssp ------------------------------------------C-CCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred ------------------------------------------c-cccccccccccccCChhhhcCCCCCcchhhHHHHHH
Confidence 0 000112478999999999999999999999999999
Q ss_pred hhhccc---cCCCCch--HHHHHHHhh---cCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 301 LFELFC---PFSTGEE--KTRTMSSLR---HRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt---pf~~~~~--~~~~~~~l~---~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+|||++ ||..... ....+..+. .....+.+...+| ...+|+.+||+.||.+|||+.++++
T Consensus 205 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 273 (296)
T 3uzp_A 205 LMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 273 (296)
T ss_dssp HHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred HHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence 999999 6654211 001111111 1111122233444 4459999999999999999999985
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=9.5e-31 Score=276.93 Aligned_cols=205 Identities=14% Similarity=0.146 Sum_probs=152.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK--PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~--~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..++.+++||||+++++ ++.+.. ..+++||| .+++|.+++.. ....+++..++.++.||+.||.|||+
T Consensus 76 ~~~~E~~~l~~l~h~~i~~~~~-~~~~~~---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~ 151 (307)
T 2nru_A 76 QFDQEIKVMAKCQHENLVELLG-FSSDGD---DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151 (307)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCeEEEEE-EEecCC---ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 3447888999999999999999 554443 56999999 79999999943 23459999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+||+++.++.+||+|||.+...+.....
T Consensus 152 ~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~------------------------------------------ 189 (307)
T 2nru_A 152 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQT------------------------------------------ 189 (307)
T ss_dssp TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSC------------------------------------------
T ss_pred CCeecCCCCHHHEEEcCCCcEEEeeccccccccccccc------------------------------------------
Confidence 99999999999999999999999999887432111000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.......||+.|+|||++.+. ++.++|||||||
T Consensus 190 ----------------------------------------------~~~~~~~g~~~y~aPE~~~~~-~~~~~Dv~slG~ 222 (307)
T 2nru_A 190 ----------------------------------------------VMTSRIVGTTAYMAPEALRGE-ITPKSDIYSFGV 222 (307)
T ss_dssp ----------------------------------------------EECSSCCSCGGGCCHHHHTTE-ECTHHHHHHHHH
T ss_pred ----------------------------------------------ccccccCCCcCcCChHHhcCC-CCccchhHHHHH
Confidence 000114689999999998764 899999999999
Q ss_pred hhhhccc---cCCCCchH---HHHHHHhhc----------CCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 300 LLFELFC---PFSTGEEK---TRTMSSLRH----------RVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~---~~~~~~l~~----------~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
++|+|++ ||...... ......+.. ..+++......+...+|+.+||+.||.+|||+.++++
T Consensus 223 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~ 299 (307)
T 2nru_A 223 VLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ 299 (307)
T ss_dssp HHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 9999999 56543221 111111111 1111111111123458999999999999999999986
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=7.3e-31 Score=279.09 Aligned_cols=217 Identities=12% Similarity=0.110 Sum_probs=156.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
..+|..++..++||||+++++.+.........+|+|||| .+++|.+++.. ....+++.+++.++.||+.||.|||+
T Consensus 73 ~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~ 152 (317)
T 2buj_A 73 AQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA 152 (317)
T ss_dssp HHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 347788999999999999999444333334468999999 88899999943 45569999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.++|+|||.+......... .
T Consensus 153 ~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~--------------------------------~--------- 191 (317)
T 2buj_A 153 KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEG--------------------------------S--------- 191 (317)
T ss_dssp TTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEES--------------------------------H---------
T ss_pred CCcccCCCCHHHEEEcCCCCEEEEecCcchhccccccc--------------------------------c---------
Confidence 99999999999999999999999999987432110000 0
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC---CCccccchh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP---VSCASDIYR 296 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~s~~sDIwS 296 (720)
...... .......||+.|+|||++.+.. ++.++||||
T Consensus 192 ----------------------~~~~~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~s 231 (317)
T 2buj_A 192 ----------------------RQALTL------------------QDWAAQRCTISYRAPELFSVQSHCVIDERTDVWS 231 (317)
T ss_dssp ----------------------HHHHHH------------------HHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHH
T ss_pred ----------------------cccccc------------------cccccccCCcccCCHhHhccCCCcCCCchhhHHH
Confidence 000000 0001146799999999997665 689999999
Q ss_pred hhhhhhhccccCCCCchHH----HHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 297 LGVLLFELFCPFSTGEEKT----RTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 297 LGvll~eLltpf~~~~~~~----~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||++|||+++..++.... .....+......+......+...+||.+||+.||.+|||+.+++++
T Consensus 232 lG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 300 (317)
T 2buj_A 232 LGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ 300 (317)
T ss_dssp HHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHhCCCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 9999999999433322110 1111222222222222233455699999999999999999999974
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=99.96 E-value=6.6e-31 Score=300.75 Aligned_cols=206 Identities=14% Similarity=0.164 Sum_probs=159.5
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|+.+|.+++|||||++++ ++... .+|+|||| .+++|.++|.. .+..+++.+++.|+.||+.||.|||++||
T Consensus 310 ~~E~~~l~~l~hpniv~~~~-~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~i 384 (535)
T 2h8h_A 310 LQEAQVMKKLRHEKLVQLYA-VVSEE----PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 384 (535)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCEeeEEE-EEeec----cceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 47888999999999999999 55442 47999999 88999999943 23458999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+|||++.++.+||+|||+++...... +
T Consensus 385 vHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~----------------------------------~------------ 418 (535)
T 2h8h_A 385 VHRDLRAANILVGENLVCKVADFGLARLIEDNE----------------------------------Y------------ 418 (535)
T ss_dssp CCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH----------------------------------H------------
T ss_pred eCCCCCHhhEEEcCCCcEEEcccccceecCCCc----------------------------------e------------
Confidence 999999999999999999999999884321100 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
. ......++..|+|||++.+..++.++|||||||+||
T Consensus 419 ------------------------~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~ 455 (535)
T 2h8h_A 419 ------------------------T-------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 455 (535)
T ss_dssp ------------------------H-------------------TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred ------------------------e-------------------cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHH
Confidence 0 000024578899999999888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc--CcccCC
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ--SEFLNE 366 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~--hp~~~~ 366 (720)
||++ ||...... .....+..+...+. ...++. ..+||.+||+.||++|||+.+|++ ..++..
T Consensus 456 el~t~g~~P~~~~~~~-~~~~~i~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 456 ELTTKGRVPYPGMVNR-EVLDQVERGYRMPC-PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp HHTTTTCCSSTTCCHH-HHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred HHHhCCCCCCCCCCHH-HHHHHHHcCCCCCC-CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 9998 66655443 34444444433222 233444 559999999999999999999986 244443
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-30 Score=277.52 Aligned_cols=209 Identities=18% Similarity=0.139 Sum_probs=155.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|.+++||||+++++ ++.... ...+++|||| .+++|.+++......+++.+++.++.||+.||.|||++|
T Consensus 88 ~~~~E~~~l~~l~h~~iv~~~~-~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 165 (326)
T 2w1i_A 88 DFEREIEILKSLQHDNIVKYKG-VCYSAG-RRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKR 165 (326)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECC-----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCeeeEEE-EEEecC-CCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 443322 2257999999 789999999766556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||+++.++.+||+|||.+......... .
T Consensus 166 ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~--------------------------------~----------- 202 (326)
T 2w1i_A 166 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEY--------------------------------Y----------- 202 (326)
T ss_dssp EECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSE--------------------------------E-----------
T ss_pred EeccCCCcceEEEcCCCcEEEecCcchhhccccccc--------------------------------c-----------
Confidence 999999999999999999999999987443211000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. ......++..|+|||++.+..++.++|||||||++
T Consensus 203 ------------------------~--------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 238 (326)
T 2w1i_A 203 ------------------------K--------------------VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL 238 (326)
T ss_dssp ------------------------E--------------------CSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred ------------------------c--------------------cccCCCCceeEECchhhcCCCCCchhhHHHHHHHH
Confidence 0 00013567889999999988899999999999999
Q ss_pred hhccccCCCCchH------------------HHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFCPFSTGEEK------------------TRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLltpf~~~~~~------------------~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||+++..+.... ......+.....++......+...+||.+||..||.+|||+.|+++
T Consensus 239 ~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~ 315 (326)
T 2w1i_A 239 YELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL 315 (326)
T ss_dssp HHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9999932222111 0111222222222222223344559999999999999999999985
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-30 Score=277.60 Aligned_cols=215 Identities=18% Similarity=0.246 Sum_probs=139.3
Q ss_pred eehhhhcccCC-CCCceecccceeec----CCCCCcEEEEEecCCCCHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGD-HLRNQGGLSGVCEN----EAAIDPFVHAIEWGDVSLRQWLDK--PKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 65 ~~e~~~Ls~l~-HpnIV~l~~~~~~~----~~~~~~~~lv~E~~ggsL~~~L~~--~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.+|..++.++. ||||+++++.+... ......++++|||.+++|.+++.. ....+++.+++.|+.||+.||.||
T Consensus 73 ~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~L 152 (337)
T 3ll6_A 73 IQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHM 152 (337)
T ss_dssp HHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 46777888885 99999999944221 122335899999977899999843 344599999999999999999999
Q ss_pred HHcC--ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccC
Q 004998 138 HSQG--IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTA 215 (720)
Q Consensus 138 Hs~g--IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~ 215 (720)
|++| |+||||||+|||++.++.+||+|||++...+..... .+ ..
T Consensus 153 H~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-------------------------------~~--~~- 198 (337)
T 3ll6_A 153 HRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDY-------------------------------SW--SA- 198 (337)
T ss_dssp HTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC----------------------------------------
T ss_pred HhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcc-------------------------------cc--cc-
Confidence 9999 999999999999999999999999998654322100 00 00
Q ss_pred CCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccc---cCCCCCccc
Q 004998 216 PTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL---AGAPVSCAS 292 (720)
Q Consensus 216 ~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l---~~~~~s~~s 292 (720)
.............||+.|+|||++ .+..++.++
T Consensus 199 --------------------------------------------~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~ 234 (337)
T 3ll6_A 199 --------------------------------------------QRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQ 234 (337)
T ss_dssp ---------------------------------------------------------------------CCTTSCSSHHH
T ss_pred --------------------------------------------cccccchhhccccCCCCcCChhhhhccccCCCChHH
Confidence 000000001124689999999998 455689999
Q ss_pred cchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 293 DIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 293 DIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||||||++|||++ ||...... ..+......+......+...+|+.+||++||.+|||+.|++++
T Consensus 235 Dv~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 302 (337)
T 3ll6_A 235 DIWALGCILYLLCFRQHPFEDGAKL----RIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302 (337)
T ss_dssp HHHHHHHHHHHHHHSSCCC----------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCcchhHH----HhhcCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999999 55443221 1111111122222233455699999999999999999999974
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.2e-30 Score=282.42 Aligned_cols=212 Identities=11% Similarity=0.048 Sum_probs=154.0
Q ss_pred eeehhhhcccCCCCCceecccc--------------eeecCCCCCcEEEEEecCCCCHHHHHhCC-CCCCCHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRNQGGLSG--------------VCENEAAIDPFVHAIEWGDVSLRQWLDKP-KRSVDVYECLHIFR 128 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~--------------~~~~~~~~~~~~lv~E~~ggsL~~~L~~~-~~~l~~~~~~~i~~ 128 (720)
..+|..++.+++||||+++++. ++.. ....+|+||||.+++|.+++... ...+++.+++.|+.
T Consensus 89 ~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~ 166 (352)
T 2jii_A 89 LFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVH--QDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVAC 166 (352)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEE--TTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcccchhhhhhhhccCCccCccchhhcccc--CCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHH
Confidence 3367889999999999985431 2222 12368999999999999999543 35599999999999
Q ss_pred HHHHHHHHHHHcCceeccCCCCcEEEccCC--ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004998 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFN--HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~--~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
||+.||.|||++||+||||||+|||++.++ .+||+|||++.........
T Consensus 167 qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~----------------------------- 217 (352)
T 2jii_A 167 RLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKH----------------------------- 217 (352)
T ss_dssp HHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCC-----------------------------
T ss_pred HHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCcc-----------------------------
Confidence 999999999999999999999999999888 8999999888543211000
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004998 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
..+ .........||+.|+|||++.+.
T Consensus 218 -~~~-----------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~ 243 (352)
T 2jii_A 218 -VAY-----------------------------------------------------VEGSRSPHEGDLEFISMDLHKGC 243 (352)
T ss_dssp -CCC-----------------------------------------------------CTTSSCTTCSCTTTCCHHHHTTC
T ss_pred -ccc-----------------------------------------------------cccccccccCCccccCHHHHccC
Confidence 000 00000124789999999999998
Q ss_pred CCCccccchhhhhhhhhccc---cCCCCc-hHHHHHHHhhc-CCCCcccc------cc-CchHHHHHHHcCCCCCCCCCC
Q 004998 287 PVSCASDIYRLGVLLFELFC---PFSTGE-EKTRTMSSLRH-RVLPPQLL------LK-FPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt---pf~~~~-~~~~~~~~l~~-~~~p~~~~------~~-~p~~~~li~~~L~~dP~~Rpt 354 (720)
.++.++|||||||++|||++ ||.... ........... ...++.+. .. .+...+|+.+||..||.+|||
T Consensus 244 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 323 (352)
T 2jii_A 244 GPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPP 323 (352)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCC
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCC
Confidence 89999999999999999999 665432 11122211110 01111111 12 344559999999999999999
Q ss_pred hHHHHc
Q 004998 355 MGELLQ 360 (720)
Q Consensus 355 a~eiL~ 360 (720)
+.++++
T Consensus 324 ~~~l~~ 329 (352)
T 2jii_A 324 YAMLRN 329 (352)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999986
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.7e-31 Score=289.37 Aligned_cols=203 Identities=15% Similarity=0.172 Sum_probs=151.9
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP--KRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~--~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
.+|..+|.+++||||+++++ ++.... ...+|+|||| .|++|.+++... ...+++..++.++.||+.||.|||++|
T Consensus 55 ~~E~~~l~~l~hpnIv~~~~-~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 132 (396)
T 4eut_A 55 MREFEVLKKLNHKNIVKLFA-IEEETT-TRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132 (396)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEECTT-TCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCCCeEEE-eeccCC-CCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 37888999999999999999 444332 3367999999 789999999543 223899999999999999999999999
Q ss_pred ceeccCCCCcEEE----ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCC
Q 004998 142 IVVHNVRPSCFVM----SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPT 217 (720)
Q Consensus 142 IvHrDLKP~NILl----~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~ 217 (720)
|+||||||+|||+ +.++.+||+|||.+.......
T Consensus 133 ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~------------------------------------------ 170 (396)
T 4eut_A 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE------------------------------------------ 170 (396)
T ss_dssp EECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGG------------------------------------------
T ss_pred EEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCC------------------------------------------
Confidence 9999999999999 677779998888774321110
Q ss_pred CCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC--------CCCC
Q 004998 218 NDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG--------APVS 289 (720)
Q Consensus 218 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--------~~~s 289 (720)
......||+.|+|||++.+ ..++
T Consensus 171 -------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~ 201 (396)
T 4eut_A 171 -------------------------------------------------QFVSLYGTEEYLHPDMYERAVLRKDHQKKYG 201 (396)
T ss_dssp -------------------------------------------------GSSCSSSCCTTCCHHHHHHHCC--CHHHHHH
T ss_pred -------------------------------------------------ccccccCCccccCHHHhhccccccccccCCC
Confidence 0011468999999999865 4578
Q ss_pred ccccchhhhhhhhhccc---cCCCC---chHHHHHHHhhcCCCCcc-----------------------ccccCc-hHHH
Q 004998 290 CASDIYRLGVLLFELFC---PFSTG---EEKTRTMSSLRHRVLPPQ-----------------------LLLKFP-KEAS 339 (720)
Q Consensus 290 ~~sDIwSLGvll~eLlt---pf~~~---~~~~~~~~~l~~~~~p~~-----------------------~~~~~p-~~~~ 339 (720)
.++|||||||++|||++ ||.+. ......+..+..+..+.. +....+ ...+
T Consensus 202 ~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 281 (396)
T 4eut_A 202 ATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTP 281 (396)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchH
Confidence 89999999999999999 66432 222334444443322211 001112 2348
Q ss_pred HHHHcCCCCCCCCCChHHHHc
Q 004998 340 FCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 340 li~~~L~~dP~~Rpta~eiL~ 360 (720)
|+.+||.+||++||++.++++
T Consensus 282 ll~~~L~~dP~~R~s~~e~l~ 302 (396)
T 4eut_A 282 VLANILEADQEKCWGFDQFFA 302 (396)
T ss_dssp HHHHHSCCCTTTSCCHHHHHH
T ss_pred HHHHhhccChhhhccHHHHHH
Confidence 999999999999999999865
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4e-30 Score=300.83 Aligned_cols=202 Identities=18% Similarity=0.164 Sum_probs=157.9
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++|||||++++ ++.++ .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++||
T Consensus 438 ~~~E~~~l~~l~HpnIv~l~~-~~~~~----~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi 512 (656)
T 2j0j_A 438 FLQEALTMRQFDHPHIVKLIG-VITEN----PVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRF 512 (656)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCCCCCeEEE-EEecC----ceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 347888999999999999999 55332 46999999 8899999997665569999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||++.........
T Consensus 513 vHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~--------------------------------------------- 547 (656)
T 2j0j_A 513 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYY--------------------------------------------- 547 (656)
T ss_dssp CCSCCSGGGEEEEETTEEEECCCCCCCSCCC-------------------------------------------------
T ss_pred cccccchHhEEEeCCCCEEEEecCCCeecCCCcce---------------------------------------------
Confidence 99999999999999999999999887443111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......+|+.|+|||++.+..++.++|||||||++|
T Consensus 548 --------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ 583 (656)
T 2j0j_A 548 --------------------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW 583 (656)
T ss_dssp --------------------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred --------------------------------------------eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHH
Confidence 000135688999999998888999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ ||...... .....+.....++......+...+||.+||+.||.+|||+.++++
T Consensus 584 ellt~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~ 644 (656)
T 2j0j_A 584 EILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644 (656)
T ss_dssp HHHTTSCCTTTTCCHH-HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHcCCCCCCCCCHH-HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 9996 66655443 344444444333322223345569999999999999999999985
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-31 Score=293.11 Aligned_cols=175 Identities=13% Similarity=0.142 Sum_probs=135.2
Q ss_pred CCcEEEEEecCCCCHHHHHh------CCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccC
Q 004998 93 IDPFVHAIEWGDVSLRQWLD------KPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESA 166 (720)
Q Consensus 93 ~~~~~lv~E~~ggsL~~~L~------~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg 166 (720)
...++++|++.+++|.++++ .....+++..++.++.||+.||.|||++|||||||||+||||+.++.+||+|||
T Consensus 177 ~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG 256 (413)
T 3dzo_A 177 VLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFE 256 (413)
T ss_dssp CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGG
T ss_pred ccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEecc
Confidence 44578999998899999983 234457888999999999999999999999999999999999999999999888
Q ss_pred cccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCCcccccccccccccccc
Q 004998 167 SCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHK 246 (720)
Q Consensus 167 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~ 246 (720)
+++..+..
T Consensus 257 ~a~~~~~~------------------------------------------------------------------------ 264 (413)
T 3dzo_A 257 HLVRDGAS------------------------------------------------------------------------ 264 (413)
T ss_dssp GCEETTEE------------------------------------------------------------------------
T ss_pred ceeecCCc------------------------------------------------------------------------
Confidence 86322100
Q ss_pred ccccccchhhhhcccCCCCccccccccCCcccCCccc----------cCCCCCccccchhhhhhhhhccc---cCCCCch
Q 004998 247 ILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL----------AGAPVSCASDIYRLGVLLFELFC---PFSTGEE 313 (720)
Q Consensus 247 ~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l----------~~~~~s~~sDIwSLGvll~eLlt---pf~~~~~ 313 (720)
....+| +.|+|||++ .+..++.++|||||||++|||++ ||.....
T Consensus 265 ---------------------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~ 322 (413)
T 3dzo_A 265 ---------------------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAA 322 (413)
T ss_dssp ---------------------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGG
T ss_pred ---------------------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcch
Confidence 011467 999999999 55558999999999999999999 6655432
Q ss_pred HHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 314 KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 314 ~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
... ...+ ++. .....+...+||.+||++||.+||++.++++||||+..
T Consensus 323 ~~~-~~~~----~~~-~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~ 370 (413)
T 3dzo_A 323 LGG-SEWI----FRS-CKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL 370 (413)
T ss_dssp GSC-SGGG----GSS-CCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred hhh-HHHH----Hhh-cccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence 211 1111 110 01122344599999999999999999999999999764
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.5e-30 Score=276.59 Aligned_cols=207 Identities=12% Similarity=0.121 Sum_probs=151.4
Q ss_pred ehhhhccc--CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH----
Q 004998 66 SDGVELTH--GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH---- 138 (720)
Q Consensus 66 ~e~~~Ls~--l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH---- 138 (720)
+|..++.. ++||||+++++.+.........+|+|||| .+++|.+++.+. .+++.+++.++.||+.||.|||
T Consensus 83 ~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~ 160 (342)
T 1b6c_B 83 REAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIV 160 (342)
T ss_dssp HHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBC
T ss_pred HHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34445444 89999999999444444333478999999 888999999653 4899999999999999999999
Q ss_pred ----HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccccc
Q 004998 139 ----SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVT 214 (720)
Q Consensus 139 ----s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~ 214 (720)
++||+||||||+|||++.++.+||+|||++......... .
T Consensus 161 ~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~--------------------------------~---- 204 (342)
T 1b6c_B 161 GTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT--------------------------------I---- 204 (342)
T ss_dssp STTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTE--------------------------------E----
T ss_pred hhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccc--------------------------------c----
Confidence 899999999999999999999999999987432111000 0
Q ss_pred CCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC------C
Q 004998 215 APTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP------V 288 (720)
Q Consensus 215 ~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------~ 288 (720)
. .......||+.|+|||++.+.. +
T Consensus 205 -------------------------------~-------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 234 (342)
T 1b6c_B 205 -------------------------------D-------------------IAPNHRVGTKRYMAPEVLDDSINMKHFES 234 (342)
T ss_dssp -------------------------------E-------------------ECCCSCCCCGGGCCHHHHTSCCCTTCHHH
T ss_pred -------------------------------c-------------------cccccCCcCcccCCHhhhccccccccccc
Confidence 0 0001146899999999998763 3
Q ss_pred Cccccchhhhhhhhhcccc-------------CCCC----chHHHHHHHhhcCCCCccccccC------chHHHHHHHcC
Q 004998 289 SCASDIYRLGVLLFELFCP-------------FSTG----EEKTRTMSSLRHRVLPPQLLLKF------PKEASFCLWLL 345 (720)
Q Consensus 289 s~~sDIwSLGvll~eLltp-------------f~~~----~~~~~~~~~l~~~~~p~~~~~~~------p~~~~li~~~L 345 (720)
+.++|||||||++|||+++ |... .........+......+.+...+ +...+|+.+||
T Consensus 235 ~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 314 (342)
T 1b6c_B 235 FKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECW 314 (342)
T ss_dssp HHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHC
T ss_pred CCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHh
Confidence 4789999999999999973 3221 11223333343433433333222 23458999999
Q ss_pred CCCCCCCCChHHHHc
Q 004998 346 HPEPSGRPKMGELLQ 360 (720)
Q Consensus 346 ~~dP~~Rpta~eiL~ 360 (720)
+.||.+|||+.++++
T Consensus 315 ~~dp~~Rps~~~i~~ 329 (342)
T 1b6c_B 315 YANGAARLTALRIKK 329 (342)
T ss_dssp CSSGGGSCCHHHHHH
T ss_pred ccChhhCCCHHHHHH
Confidence 999999999999986
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.9e-30 Score=282.33 Aligned_cols=197 Identities=11% Similarity=0.054 Sum_probs=142.7
Q ss_pred ehhhhcccCC---CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC----CCCCCCHHHHHHHHHHHHHHHHHH
Q 004998 66 SDGVELTHGD---HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK----PKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 66 ~e~~~Ls~l~---HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~----~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
+|..++..+. |+||+++++ ++.... ..|+|||| .|++|.+++.. ....+++..++.|+.||+.||.||
T Consensus 113 ~e~~~~~~l~~~~~~~iv~~~~-~~~~~~---~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~l 188 (365)
T 3e7e_A 113 IGTQLMERLKPSMQHMFMKFYS-AHLFQN---GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQV 188 (365)
T ss_dssp HHHHHHHHSCGGGGGGBCCEEE-EEECSS---CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhhhhhhhhhe-eeecCC---CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH
Confidence 3444444444 999999999 444443 57999999 89999999953 345699999999999999999999
Q ss_pred HHcCceeccCCCCcEEEcc-----------CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccc
Q 004998 138 HSQGIVVHNVRPSCFVMSS-----------FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLR 206 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~-----------~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 206 (720)
|++|||||||||+|||++. ++.+||+|||++........
T Consensus 189 H~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~------------------------------ 238 (365)
T 3e7e_A 189 HDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPK------------------------------ 238 (365)
T ss_dssp HTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCT------------------------------
T ss_pred hhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCC------------------------------
Confidence 9999999999999999998 89999999888743210000
Q ss_pred ccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC
Q 004998 207 REDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA 286 (720)
Q Consensus 207 l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 286 (720)
.......+||+.|+|||++.+.
T Consensus 239 ----------------------------------------------------------~~~~~~~~gt~~y~aPE~~~~~ 260 (365)
T 3e7e_A 239 ----------------------------------------------------------GTIFTAKCETSGFQCVEMLSNK 260 (365)
T ss_dssp ----------------------------------------------------------TEEECCSSCTTSCCCHHHHTTC
T ss_pred ----------------------------------------------------------CceeeeecCCCCCCChHHhcCC
Confidence 0000124789999999999999
Q ss_pred CCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 287 PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 287 ~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
.++.++|||||||++|||++ ||....... ......++.. ...+...+++..||+.+|.+|++..+.|.
T Consensus 261 ~~~~~~DiwslG~il~elltg~~pf~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~l~~~p~~r~~~~~~l~ 331 (365)
T 3e7e_A 261 PWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE----CKPEGLFRRL--PHLDMWNEFFHVMLNIPDCHHLPSLDLLR 331 (365)
T ss_dssp CBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE----EEECSCCTTC--SSHHHHHHHHHHHHCCCCTTCCCCHHHHH
T ss_pred CCCccccHHHHHHHHHHHHhCCCccccCCCCc----eeechhcccc--CcHHHHHHHHHHHcCCCCCCcchHHHHHH
Confidence 99999999999999999999 443322110 0001111111 11123348999999999999965444443
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.8e-29 Score=266.76 Aligned_cols=190 Identities=16% Similarity=0.225 Sum_probs=139.9
Q ss_pred ehhhhc-ccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 66 SDGVEL-THGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 66 ~e~~~L-s~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+|..++ ..++||||+++++.+.........+|+|||| .|++|.+++... ...+++.+++.++.||+.||.|||++||
T Consensus 59 ~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i 138 (299)
T 3m2w_A 59 REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 138 (299)
T ss_dssp HHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 455555 5579999999999443322223368999999 788999999543 3469999999999999999999999999
Q ss_pred eeccCCCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 143 VVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 143 vHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||||||+|||++. ++.++|+|||++...
T Consensus 139 ~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~------------------------------------------------ 170 (299)
T 3m2w_A 139 AHRDVKPENLLYTSKRPNAILKLTDFGFAKET------------------------------------------------ 170 (299)
T ss_dssp ECCCCSGGGEEESSSSTTCCEEECCCTTCEEC------------------------------------------------
T ss_pred ccCCCCHHHEEEecCCCCCcEEEecccccccc------------------------------------------------
Confidence 99999999999997 788999888765110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.+..++.++|||||||
T Consensus 171 ----------------------------------------------------------------~~~~~~~~~DiwslG~ 186 (299)
T 3m2w_A 171 ----------------------------------------------------------------TGEKYDKSCDMWSLGV 186 (299)
T ss_dssp ----------------------------------------------------------------TTCGGGGHHHHHHHHH
T ss_pred ----------------------------------------------------------------ccccCCchhhHHHHHH
Confidence 0123688999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcC------CCCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHR------VLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~------~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
++|||++ ||....... ....+... .++......+ +...+||.+||++||.+|||+.|+|+||||....
T Consensus 187 il~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~ 264 (299)
T 3m2w_A 187 IMYILLCGYPPFYSNHGLA-ISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264 (299)
T ss_dssp HHHHHHHSSCSCCC--------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred HHHHHHHCCCCCCCCcchh-hhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence 9999999 565432221 11111111 1121111233 3445999999999999999999999999998763
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-29 Score=283.02 Aligned_cols=211 Identities=18% Similarity=0.176 Sum_probs=155.5
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
..+|..++..+.|++++..+..+.... ...|+||||.+++|.+++......+++.+++.|+.||+.||.|||++|||
T Consensus 49 ~~~E~~il~~L~~~~~i~~i~~~~~~~---~~~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIv 125 (483)
T 3sv0_A 49 LLYESKIYRILQGGTGIPNVRWFGVEG---DYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFL 125 (483)
T ss_dssp HHHHHHHHHHTTTSTTCCCEEEEEEET---TEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHHHhcCCCCCCeEEEEEeeC---CEEEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEe
Confidence 346777888888877666665344333 36799999999999999975556699999999999999999999999999
Q ss_pred eccCCCCcEEE---ccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 144 VHNVRPSCFVM---SSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 144 HrDLKP~NILl---~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||||||+|||| +.++.+||+|||+++.......... .
T Consensus 126 HrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~------------------------------~---------- 165 (483)
T 3sv0_A 126 HRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQH------------------------------I---------- 165 (483)
T ss_dssp CCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB------------------------------C----------
T ss_pred ecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccc------------------------------c----------
Confidence 99999999999 5889999999998854322110000 0
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
. ........||+.|+|||++.+..++.++|||||||+
T Consensus 166 ------------------------------------------~-~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvi 202 (483)
T 3sv0_A 166 ------------------------------------------P-YRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYV 202 (483)
T ss_dssp ------------------------------------------C-CCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred ------------------------------------------c-cccccccCCCccccCHHHhcCCCCChHHHHHHHHHH
Confidence 0 000012578999999999999999999999999999
Q ss_pred hhhccc---cCCCCch--HHHHHHHhhcC---CCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 301 LFELFC---PFSTGEE--KTRTMSSLRHR---VLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 301 l~eLlt---pf~~~~~--~~~~~~~l~~~---~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||||++ ||..... ....+..+... ...+.+...+|. ..+|+.+||+.+|.+||++.+|++
T Consensus 203 l~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 203 LMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 999999 6765321 22222222211 111222234444 459999999999999999998875
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.1e-30 Score=301.13 Aligned_cols=198 Identities=18% Similarity=0.209 Sum_probs=148.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCC-cEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAID-PFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~-~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++|||||++++.+........ .+|+|||| .|++|.+++.. .+++.+++.|+.||+.||.|||++
T Consensus 125 ~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~ 201 (681)
T 2pzi_A 125 MAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSI 201 (681)
T ss_dssp HHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 34478889999999999999994443332222 26999999 89999998844 499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|||||||||+|||++.+ .+||+|||+++..+..
T Consensus 202 giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~---------------------------------------------- 234 (681)
T 2pzi_A 202 GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF---------------------------------------------- 234 (681)
T ss_dssp TEECCCCSGGGEEECSS-CEEECCCTTCEETTCC----------------------------------------------
T ss_pred CCeecccChHHeEEeCC-cEEEEecccchhcccC----------------------------------------------
Confidence 99999999999999874 8999988877322100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
....||+.|+|||++.+. ++.++|||||||+
T Consensus 235 ------------------------------------------------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~ 265 (681)
T 2pzi_A 235 ------------------------------------------------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRT 265 (681)
T ss_dssp ------------------------------------------------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHH
T ss_pred ------------------------------------------------CccCCCccccCHHHHcCC-CCCceehhhhHHH
Confidence 014689999999999776 4899999999999
Q ss_pred hhhccccCCCCchHHHHHHHhhcCCCC-ccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 301 LFELFCPFSTGEEKTRTMSSLRHRVLP-PQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 301 l~eLltpf~~~~~~~~~~~~l~~~~~p-~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
+|+|++++.+.... ....... .......+...+||.+||++||.+||+..+.+.|+|+.
T Consensus 266 l~~l~~g~~~~~~~------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 266 LAALTLDLPTRNGR------YVDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp HHHHHSCCCEETTE------ECSSCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred HHHHHhCCCCCccc------ccccccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 99999965443221 0111111 11112234556999999999999999988888877653
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=99.95 E-value=4.1e-29 Score=268.42 Aligned_cols=170 Identities=12% Similarity=0.085 Sum_probs=124.3
Q ss_pred CCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH-HcCceeccCCCCcEEEccCC------------
Q 004998 93 IDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH-SQGIVVHNVRPSCFVMSSFN------------ 158 (720)
Q Consensus 93 ~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH-s~gIvHrDLKP~NILl~~~~------------ 158 (720)
...+|+|||| .+|+|.+.+.+ ..+++.+++.|+.||+.||.||| ++|||||||||+|||++.++
T Consensus 134 ~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~ 211 (336)
T 2vuw_A 134 DDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKS 211 (336)
T ss_dssp TTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEE
T ss_pred cCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCcc
Confidence 3478999999 78876666633 34899999999999999999999 99999999999999999877
Q ss_pred --------ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccccccCCC
Q 004998 159 --------HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEASCMQSSS 230 (720)
Q Consensus 159 --------~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~ 230 (720)
.+||+|||+++.. ..
T Consensus 212 ~~~~~~~~~vkL~DFG~a~~~---------------------------------------------~~------------ 234 (336)
T 2vuw_A 212 STIPSCGLQVSIIDYTLSRLE---------------------------------------------RD------------ 234 (336)
T ss_dssp EEEECTTEEEEECCCTTCBEE---------------------------------------------ET------------
T ss_pred ccccCCCceEEEeeccccEec---------------------------------------------CC------------
Confidence 6777666655211 00
Q ss_pred ccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh-hhhccccCC
Q 004998 231 AYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL-LFELFCPFS 309 (720)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl-l~eLltpf~ 309 (720)
...+||+.|+|||++.+.. +.++||||||++ .+++++++.
T Consensus 235 --------------------------------------~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~ 275 (336)
T 2vuw_A 235 --------------------------------------GIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYH 275 (336)
T ss_dssp --------------------------------------TEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCC
T ss_pred --------------------------------------CcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccC
Confidence 0137899999999999876 899999998777 777877555
Q ss_pred CCchH---HHHHHHhh-cCC----CCccccccC-chHHHHHHHcCCCCCCCCCChHHHH-cCcccC
Q 004998 310 TGEEK---TRTMSSLR-HRV----LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELL-QSEFLN 365 (720)
Q Consensus 310 ~~~~~---~~~~~~l~-~~~----~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL-~hp~~~ 365 (720)
+.... ......+. ... .++.....+ +...+||.+||++| |+.|+| +||||+
T Consensus 276 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 276 PYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp THHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred CCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence 54331 11222222 111 112222223 34459999999977 999999 999995
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=99.94 E-value=1e-27 Score=252.26 Aligned_cols=173 Identities=17% Similarity=0.167 Sum_probs=132.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..++.+++||||+++++ ++.... .+|+|||| .|++|.++++. + ....++..|+.||+.||.|||++|
T Consensus 77 ~~~~e~~~l~~l~hp~iv~~~~-~~~~~~---~~~lv~e~~~g~~L~~~l~~-~--~~~~~~~~i~~ql~~aL~~lH~~g 149 (286)
T 3uqc_A 77 ETLSRTLRLSRIDKPGVARVLD-VVHTRA---GGLVVAEWIRGGSLQEVADT-S--PSPVGAIRAMQSLAAAADAAHRAG 149 (286)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCCEEEHHHHHTT-C--CCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCCcceeeE-EEEECC---cEEEEEEecCCCCHHHHHhc-C--CChHHHHHHHHHHHHHHHHHHHCC
Confidence 3447777899999999999999 554443 58999999 88999999943 2 466688999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.+|.+||+
T Consensus 150 ivH~Dikp~NIll~~~g~~kl~---------------------------------------------------------- 171 (286)
T 3uqc_A 150 VALSIDHPSRVRVSIDGDVVLA---------------------------------------------------------- 171 (286)
T ss_dssp CCCCCCSGGGEEEETTSCEEEC----------------------------------------------------------
T ss_pred CccCCCCcccEEEcCCCCEEEE----------------------------------------------------------
Confidence 9999999999999999999883
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
++.|++| ++.++|||||||++
T Consensus 172 ----------------------------------------------------~~~~~~~-------~~~~~Di~slG~il 192 (286)
T 3uqc_A 172 ----------------------------------------------------YPATMPD-------ANPQDDIRGIGASL 192 (286)
T ss_dssp ----------------------------------------------------SCCCCTT-------CCHHHHHHHHHHHH
T ss_pred ----------------------------------------------------eccccCC-------CCchhHHHHHHHHH
Confidence 2234443 78999999999999
Q ss_pred hhccc---cCCCCchHHHH---HHHhhcCCCC-ccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC---PFSTGEEKTRT---MSSLRHRVLP-PQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~---~~~l~~~~~p-~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||......... ...+.....+ ..+....|. ..+||.+||++||.+| |+.|+++
T Consensus 193 ~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~ 258 (286)
T 3uqc_A 193 YALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLN 258 (286)
T ss_dssp HHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred HHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHH
Confidence 99999 77764332100 0111111111 122234444 4599999999999999 9999986
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-26 Score=266.35 Aligned_cols=189 Identities=16% Similarity=0.095 Sum_probs=125.6
Q ss_pred eehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|+.+|.++ .|+||+++++ +++++. .+|||||| .|++|.++|.+.+ ++++. .|+.||+.||+|||++||
T Consensus 289 ~~E~~~l~~~~~~~~i~~~~~-~~ed~~---~~yLVMEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH~~GI 360 (569)
T 4azs_A 289 HNEIKFLTQPPAGFDAPAVLA-HGENAQ---SGWLVMEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALEKQGF 360 (569)
T ss_dssp HHHHHHHHSCCTTCCCCCEEE-EEECSS---EEEEEEECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCCCCeeEEEE-EEEECC---EEEEEEecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHHHCCc
Confidence 3788899998 7999999999 666654 67999999 9999999996654 47764 488999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+||||+.+|++||+|||+++....+..
T Consensus 361 IHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~---------------------------------------------- 394 (569)
T 4azs_A 361 WHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS---------------------------------------------- 394 (569)
T ss_dssp EESCCCGGGEEECTTSCEEECCCTTEESCC---C----------------------------------------------
T ss_pred eeccCchHhEEECCCCCEEEeecccCeeCCCCCc----------------------------------------------
Confidence 9999999999999999999998888754321100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+||+.|||||++.+. +..++|+||+|++++
T Consensus 395 --------------------------------------------~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~ 429 (569)
T 4azs_A 395 --------------------------------------------WPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPF 429 (569)
T ss_dssp --------------------------------------------CSHHHHHHHHHHHHHHC------------------C
T ss_pred --------------------------------------------cccCceechhhccHHHhCCC-CCCcccccccccchh
Confidence 00125799999999999875 678899999999999
Q ss_pred hccccCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 303 ELFCPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 303 eLltpf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
+|.+++... ...+.. .++.. .....+...++..+|..||.......++|.
T Consensus 430 ~l~~~~~~~------~~~l~~--~~~~~----~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 479 (569)
T 4azs_A 430 NLPQPWSNW------LYAVWQ--EPVER----WNFVLLLALFEKKAKLPSAEQQRGATEQWI 479 (569)
T ss_dssp CCCTTHHHH------HHHHHT--SCGGG----CSHHHHHHHHHTGGGSCCGGGSSCCHHHHH
T ss_pred hhccccchh------HHHhhc--CCCCC----CcHHHHHHHHhCCCCCCCCChhhhccchhH
Confidence 998743221 111111 11111 123466677778888888776655555543
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=3.5e-19 Score=203.48 Aligned_cols=93 Identities=13% Similarity=0.097 Sum_probs=77.9
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++||||+++.. ++.... ..|+|||| .|++|.+++.. ++.|+.||+.||.|||++||
T Consensus 386 ~~~E~~il~~l~h~nIv~~~~-~~~~~~---~~~lVmE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH~~gI 452 (540)
T 3en9_A 386 TAREARYLALVKDFGIPAPYI-FDVDLD---NKRIMMSYINGKLAKDVIED---------NLDIAYKIGEIVGKLHKNDV 452 (540)
T ss_dssp HHHHHHHHHHGGGGTCCCCCE-EEEETT---TTEEEEECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcCCCCcCceEE-EEEeCC---ccEEEEECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHHHCcC
Confidence 358888999999999994433 112222 35999999 78999999954 56899999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCC
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~ 171 (720)
+||||||+|||++. .+||+|||+++..
T Consensus 453 iHrDiKp~NILl~~--~~kL~DFGla~~~ 479 (540)
T 3en9_A 453 IHNDLTTSNFIFDK--DLYIIDFGLGKIS 479 (540)
T ss_dssp ECTTCCTTSEEESS--SEEECCCTTCEEC
T ss_pred ccCCCCHHHEEECC--eEEEEECccCEEC
Confidence 99999999999998 9999999988543
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=7.3e-15 Score=158.09 Aligned_cols=127 Identities=10% Similarity=0.038 Sum_probs=99.3
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCE
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i 659 (720)
++..++|...+-+.+..++. .+.+|.+.|++|+|+|||++|||||.|++|+|||+.+. .++..+ .|.+.|
T Consensus 102 dg~v~lWd~~~~~~~~~~~~-~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~--------~~~~~~~~h~~~V 172 (344)
T 4gqb_B 102 SGAVELWELDENETLIVSKF-CKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQ--------VVLSSYRAHAAQV 172 (344)
T ss_dssp TSEEEEEEECTTSSCEEEEE-EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCE
T ss_pred CCEEEEEeccCCCceeEeec-cccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCC--------cEEEEEcCcCCce
Confidence 33445554443333322221 23478999999999999999999999999999998876 245444 457889
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE---------EEEEeecCC-ceEEEecCccceE
Q 004998 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA---------LYCIVLNKL-LIIFRYGMFQEVK 716 (720)
Q Consensus 660 ~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~---------v~~v~~~~~-~~~~~~~~~~~~~ 716 (720)
.+++|+|++..+|||++.|++|+|||+++++++.+ +.+++|++. +.++++|+.|..-
T Consensus 173 ~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v 239 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTV 239 (344)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEE
T ss_pred EEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcE
Confidence 99999998888999999999999999999998775 789999985 5678899887643
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.3e-14 Score=154.10 Aligned_cols=121 Identities=14% Similarity=0.124 Sum_probs=101.3
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEE
Q 004998 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLS 660 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~ 660 (720)
+..+++...+.+++.+++ +|...|.+++|+|||++|||||.|++|+|||+++. ..+..+ .|...|.
T Consensus 186 g~i~iwd~~~~~~~~~~~-----~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~--------~~~~~~~~h~~~v~ 252 (321)
T 3ow8_A 186 GIINIFDIATGKLLHTLE-----GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA--------NLAGTLSGHASWVL 252 (321)
T ss_dssp SCEEEEETTTTEEEEEEC-----CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC--------CEEEEECCCSSCEE
T ss_pred CeEEEEECCCCcEEEEEc-----ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc--------ceeEEEcCCCCceE
Confidence 345666666667776665 45889999999999999999999999999998765 233344 3577899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 661 ~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+|+|+|+ +.+|||++.|++|+|||+.+++++.+ |++++|++.+..+++++.|..-
T Consensus 253 ~~~~sp~-~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i 314 (321)
T 3ow8_A 253 NVAFCPD-DTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEI 314 (321)
T ss_dssp EEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCE
T ss_pred EEEECCC-CCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeE
Confidence 9999996 46999999999999999999999987 8999999999999999988643
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=99.57 E-value=1.6e-14 Score=151.91 Aligned_cols=104 Identities=10% Similarity=0.017 Sum_probs=90.9
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
.+|.+.|.+|+|+|||++||||+.|++|+|||+.+.. ++..+. +...|.+++|+|+ +++||||+.|++|+
T Consensus 10 ~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~--------~~~~~~~~~~~v~~~~~~~~-~~~l~s~s~d~~i~ 80 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQV--------EVRSIQVTETPVRAGKFIAR-KNWIIVGSDDFRIR 80 (304)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE--------EEEEEECCSSCEEEEEEEGG-GTEEEEEETTSEEE
T ss_pred cCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc--------eeEEeeccCCcEEEEEEeCC-CCEEEEECCCCEEE
Confidence 3468999999999999999999999999999987752 344443 4678999999995 57999999999999
Q ss_pred EEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 683 VGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 683 lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|||+.+|+++.+ |++++|+|.+..+++|+.|..-
T Consensus 81 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v 121 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTV 121 (304)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCE
T ss_pred EEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeE
Confidence 999999999876 8999999999999999998643
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.55 E-value=2.3e-14 Score=154.24 Aligned_cols=127 Identities=9% Similarity=0.070 Sum_probs=101.3
Q ss_pred chhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEe---
Q 004998 578 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--- 653 (720)
Q Consensus 578 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--- 653 (720)
.-.++..++|...+.+++.+++ +|.+.|.+++|+|++. +|||||.|++|+|||+++. .++..+
T Consensus 145 gs~d~~i~iwd~~~~~~~~~~~-----~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~--------~~~~~~~~~ 211 (344)
T 4gqb_B 145 GSKDICIKVWDLAQQVVLSSYR-----AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCP--------KPASQIGCS 211 (344)
T ss_dssp EETTSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSS--------SCEEECC--
T ss_pred EeCCCeEEEEECCCCcEEEEEc-----CcCCceEEEEecCCCCCceeeecccccccccccccc--------ceeeeeecc
Confidence 3445566777777777777664 4689999999999995 7999999999999998876 233333
Q ss_pred cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCc-eEEEecCccceEE
Q 004998 654 ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLL-IIFRYGMFQEVKY 717 (720)
Q Consensus 654 ~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~-~~~~~~~~~~~~~ 717 (720)
.+...+.+++|+|+++++||+|+.||+|+|||+++++++.+ |++++|+|.+ .++++|+.|..-+
T Consensus 212 ~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~ 283 (344)
T 4gqb_B 212 APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLA 283 (344)
T ss_dssp --CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEE
T ss_pred eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEE
Confidence 22456999999998888999999999999999999998876 8999999998 5789999886543
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.55 E-value=3.6e-14 Score=148.65 Aligned_cols=108 Identities=12% Similarity=0.146 Sum_probs=87.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecC-CCCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~-~~~~laS~s~D~~ 680 (720)
+.+|...|.+++|+|||++|||||.|++|+|||+..... .++..+ .|.+.|.+|+|+|. .+++||||+.||+
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~------~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~ 78 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTE
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc------EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCE
Confidence 457899999999999999999999999999999864311 234444 45788999999864 3679999999999
Q ss_pred EEEEECCCCc--EEEE-------EEEEeecCC--ceEEEecCccceE
Q 004998 681 VQVGQVLHLI--YFSA-------LYCIVLNKL--LIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWDv~tg~--~~~~-------v~~v~~~~~--~~~~~~~~~~~~~ 716 (720)
|+|||+.+++ .+.+ |++++|+|. +..+++|+.|..-
T Consensus 79 v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v 125 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKV 125 (297)
T ss_dssp EEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred EEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcE
Confidence 9999999874 3332 899999997 7889999888643
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.54 E-value=4.2e-14 Score=151.16 Aligned_cols=113 Identities=10% Similarity=0.091 Sum_probs=92.1
Q ss_pred CCCCCCCCeEEEEE-----CC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEE
Q 004998 602 DLLNSSNLVCSLSF-----DR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIAS 674 (720)
Q Consensus 602 ~~~~~~~~V~sv~f-----~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS 674 (720)
.|.+|.+.|.+|+| ++ ||++|||||.|++|+|||+........ ...++..+ .|...|++|+|+|+ +.+|||
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~-~~~~~~~l~~h~~~V~~~~~~~~-~~~l~s 93 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGY-FGIPHKALTGHNHFVSDLALSQE-NCFAIS 93 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSB-SEEEEEEECCCSSCEEEEEECSS-TTEEEE
T ss_pred eeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccc-cccccchhccCCCceEEEEECCC-CCEEEE
Confidence 35567999999999 76 999999999999999999865321110 11244444 45778999999995 569999
Q ss_pred EeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 675 SNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 675 ~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+.|++|+|||+++++++.+ |++++|+|.+..+++|+.|..-
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i 142 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREI 142 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCE
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEE
Confidence 99999999999999998876 8999999999999999988643
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=99.53 E-value=3.9e-14 Score=150.08 Aligned_cols=110 Identities=12% Similarity=0.120 Sum_probs=92.0
Q ss_pred CCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCC
Q 004998 602 DLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
.|.+|.+.|.+|+|+|++ ++|||||.|++|+|||+..... ....|+..+ .|...|.+++|+|+ +.+||||+.|+
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~---~~~~~~~~~~~h~~~v~~~~~s~d-g~~l~s~s~D~ 87 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ---KFGVPVRSFKGHSHIVQDCTLTAD-GAYALSASWDK 87 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT---EEEEEEEEEECCSSCEEEEEECTT-SSEEEEEETTS
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc---cccccceEEeCCcccEEEEEECCC-CCEEEEEeCCC
Confidence 346679999999999976 8999999999999999754311 111345555 45778999999996 56999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|+|||+.+|+++.+ |++++|++.+..+++|+.|..
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 130 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKT 130 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSC
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 999999999998876 899999999999999999864
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.53 E-value=2.4e-14 Score=157.39 Aligned_cols=122 Identities=15% Similarity=0.178 Sum_probs=100.3
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCC
Q 004998 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSK 658 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~ 658 (720)
.++..+.|.+.+.+.+.++ .+|...|.+|+|+|+|++|||||.|++|+|||+.+. .++..+ .|...
T Consensus 128 ~Dg~i~vwd~~~~~~~~~l-----~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~--------~~~~~~~~h~~~ 194 (410)
T 1vyh_C 128 EDATIKVWDYETGDFERTL-----KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF--------ECIRTMHGHDHN 194 (410)
T ss_dssp SSSCEEEEETTTCCCCEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS--------CEEECCCCCSSC
T ss_pred CCCeEEEEECCCCcEEEEE-----eccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC--------ceeEEEcCCCCC
Confidence 3445566666555555554 456899999999999999999999999999998765 233333 34778
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 659 i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|++|+|+|+ +++|+||+.|++|++||+++|+++.+ |.+++|++.+..+++|+.|..
T Consensus 195 V~~v~~~p~-~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~ 257 (410)
T 1vyh_C 195 VSSVSIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQT 257 (410)
T ss_dssp EEEEEECSS-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEEEEeCC-CCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCe
Confidence 999999995 56999999999999999999999876 889999999999999998854
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=99.53 E-value=3.3e-14 Score=149.47 Aligned_cols=125 Identities=14% Similarity=0.154 Sum_probs=102.1
Q ss_pred chhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCC
Q 004998 578 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASR 656 (720)
Q Consensus 578 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~ 656 (720)
.-.++..++|.+.+.+.+..+. +|...|.+++|+|++++||+||.|++|+|||+.+. .++..+ .|.
T Consensus 31 ~~~dg~v~lWd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~--------~~~~~~~~h~ 97 (304)
T 2ynn_A 31 TLYSGRVELWNYETQVEVRSIQ-----VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG--------EKVVDFEAHP 97 (304)
T ss_dssp EETTSEEEEEETTTTEEEEEEE-----CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC--------CEEEEEECCS
T ss_pred EcCCCcEEEEECCCCceeEEee-----ccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCC--------cEEEEEeCCC
Confidence 3345567788887777777765 34789999999999999999999999999998876 234333 457
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEE-E-------EEEEeecC-CceEEEecCccceE
Q 004998 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFS-A-------LYCIVLNK-LLIIFRYGMFQEVK 716 (720)
Q Consensus 657 ~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~-~-------v~~v~~~~-~~~~~~~~~~~~~~ 716 (720)
..|.+|+|+|+ +.+||||+.||+|+|||++++..+. . |+|++|+| .+..+++|+.|..-
T Consensus 98 ~~v~~~~~~~~-~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v 165 (304)
T 2ynn_A 98 DYIRSIAVHPT-KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (304)
T ss_dssp SCEEEEEECSS-SSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEE
T ss_pred CcEEEEEEcCC-CCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeE
Confidence 88999999996 5699999999999999999885543 2 89999999 67899999988643
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.52 E-value=4.9e-14 Score=154.92 Aligned_cols=106 Identities=9% Similarity=0.032 Sum_probs=92.5
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|.+.|++++|+|++.+|||||.|++|+|||+.+.. .+..+ .|...|.+|+|+|+ +.+||||+.|++|
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~--------~~~~l~~h~~~V~~v~~~~~-~~~l~sgs~D~~i 174 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD--------FERTLKGHTDSVQDISFDHS-GKLLASCSADMTI 174 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC--------CCEEECCCSSCEEEEEECTT-SSEEEEEETTSCC
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--------EEEEEeccCCcEEEEEEcCC-CCEEEEEeCCCeE
Confidence 45679999999999999999999999999999988762 33334 45778999999995 5699999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 682 ~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|||+.+++++.+ |+|++|+|.+..+++|+.|..-+
T Consensus 175 ~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~ 217 (410)
T 1vyh_C 175 KLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIK 217 (410)
T ss_dssp CEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred EEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEE
Confidence 9999999999876 99999999999999999987543
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.52 E-value=2.2e-14 Score=151.72 Aligned_cols=109 Identities=10% Similarity=0.150 Sum_probs=85.5
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecC-CCCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~-~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+|+|+|||++|||||.|++|+|||+.+... .++..+ .|...|.+|+|+|. .+++||||+.|++
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~------~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~ 82 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ------ILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRK 82 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE------EEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc------EEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCE
Confidence 457899999999999999999999999999999865410 123333 46789999999863 4679999999999
Q ss_pred EEEEECCCCc--EEEE-------EEEEeecCC--ceEEEecCccceEE
Q 004998 681 VQVGQVLHLI--YFSA-------LYCIVLNKL--LIIFRYGMFQEVKY 717 (720)
Q Consensus 681 v~lWDv~tg~--~~~~-------v~~v~~~~~--~~~~~~~~~~~~~~ 717 (720)
|+|||+++++ ++.+ |++++|+|. +.++++|+.|...+
T Consensus 83 v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~ 130 (316)
T 3bg1_A 83 VIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAIS 130 (316)
T ss_dssp EEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEE
T ss_pred EEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEE
Confidence 9999999884 4433 889999998 78999999886543
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.52 E-value=1.8e-15 Score=158.46 Aligned_cols=88 Identities=15% Similarity=0.037 Sum_probs=72.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|.+++ | +++++ ++..+ ..|+|||| .|++|.+ +.. .+...++.||+.||.|||++||
T Consensus 151 ~~~E~~~l~~l~--~-~~v~~-~~~~~----~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH~~gi 214 (282)
T 1zar_A 151 ARNEFRALQKLQ--G-LAVPK-VYAWE----GNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFYHRGI 214 (282)
T ss_dssp HHHHHHHHHHTT--T-SSSCC-EEEEE----TTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhcc--C-CCcCe-EEecc----ceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHHHCCC
Confidence 347888999998 5 66666 44332 35999999 8899988 521 2345799999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
+||||||+|||++ ++.+||+|||++
T Consensus 215 iHrDlkp~NILl~-~~~vkl~DFG~a 239 (282)
T 1zar_A 215 VHGDLSQYNVLVS-EEGIWIIDFPQS 239 (282)
T ss_dssp ECSCCSTTSEEEE-TTEEEECCCTTC
T ss_pred EeCCCCHHHEEEE-CCcEEEEECCCC
Confidence 9999999999999 999999988877
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.51 E-value=8.2e-14 Score=150.30 Aligned_cols=124 Identities=10% Similarity=0.061 Sum_probs=98.5
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEE
Q 004998 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLS 660 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~ 660 (720)
..++|...+.+.+..+ .+..|...|.+|+|+|++ .+||+|+.|++|+|||+++. .++..+ .+...|+
T Consensus 205 ~v~~wd~~~~~~~~~~---~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~--------~~~~~~~~~~~~v~ 273 (357)
T 4g56_B 205 RILLWDTRKPKPATRI---DFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP--------DSAQTSAVHSQNIT 273 (357)
T ss_dssp CEEECCTTSSSCBCBC---CCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG--------GGCEEECCCSSCEE
T ss_pred ceEEEECCCCceeeee---eeccccccccchhhhhcccceEEEeecccceeEEECCCC--------cEeEEEeccceeEE
Confidence 3445544444433333 233567889999999985 68999999999999998776 234444 3477899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecC-CceEEEecCccceEE
Q 004998 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNK-LLIIFRYGMFQEVKY 717 (720)
Q Consensus 661 ~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~-~~~~~~~~~~~~~~~ 717 (720)
+|+|+|+++.+|||++.|++|+|||+.+++++.. |++|+|+| .+..+++|+.|..-+
T Consensus 274 ~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~ 337 (357)
T 4g56_B 274 GLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVL 337 (357)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred EEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEE
Confidence 9999998878999999999999999999999886 99999998 789999999986543
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=99.51 E-value=1.6e-13 Score=146.60 Aligned_cols=121 Identities=12% Similarity=0.152 Sum_probs=99.3
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCE
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i 659 (720)
++..++|...+.+.+.++ .+|.+.|.+++|+|+|.+|||||.|++|+|||+++. .++..+ .|...|
T Consensus 163 d~~i~~wd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~--------~~~~~~~~h~~~v 229 (340)
T 1got_B 163 DTTCALWDIETGQQTTTF-----TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG--------MCRQTFTGHESDI 229 (340)
T ss_dssp TSCEEEEETTTTEEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--------SEEEEECCCSSCE
T ss_pred CCcEEEEECCCCcEEEEE-----cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC--------eeEEEEcCCcCCE
Confidence 344555555555555555 456899999999999999999999999999998765 234444 357789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE---------EEEEeecCCceEEEecCccce
Q 004998 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 660 ~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+|+|+|+ +++||||+.||+|+|||+++++.+.+ |.+++|+|.+..+.+|+-|..
T Consensus 230 ~~v~~~p~-~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~ 293 (340)
T 1got_B 230 NAICFFPN-GNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN 293 (340)
T ss_dssp EEEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEEcCC-CCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCe
Confidence 99999996 56999999999999999999988764 789999999999999988754
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=99.51 E-value=1.2e-13 Score=147.67 Aligned_cols=122 Identities=10% Similarity=0.113 Sum_probs=97.1
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC---CCC
Q 004998 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS---RSK 658 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~ 658 (720)
+..++|...+.+.+.+ +.+|...|++|+|+|+|.+|||||.|++|+|||+++. .++..+.+ ...
T Consensus 206 ~~v~~wd~~~~~~~~~-----~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~--------~~~~~~~~~~~~~~ 272 (340)
T 1got_B 206 ASAKLWDVREGMCRQT-----FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD--------QELMTYSHDNIICG 272 (340)
T ss_dssp SCEEEEETTTCSEEEE-----ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCTTCCSC
T ss_pred CcEEEEECCCCeeEEE-----EcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC--------cEEEEEccCCcccc
Confidence 3344444444333333 4567899999999999999999999999999998765 13333333 246
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 659 i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|.+++|+|+ +.+||+|+.||+|+|||+.+++.+.+ |+|++|+|.+..+++|+.|..-+
T Consensus 273 v~~~~~s~~-g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~ 337 (340)
T 1got_B 273 ITSVSFSKS-GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337 (340)
T ss_dssp EEEEEECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred eEEEEECCC-CCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEE
Confidence 999999995 56999999999999999999998776 89999999999999999997544
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=99.50 E-value=1.2e-13 Score=157.18 Aligned_cols=105 Identities=14% Similarity=0.131 Sum_probs=89.7
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCC
Q 004998 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
..|.||.+.|++|+|+|||++|||||.|++|+|||.. . .++..+ .|.+.|.+|+|+|+ +.+|||++.|+
T Consensus 10 ~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~-~--------~~~~~l~gh~~~V~~l~fspd-g~~las~~~d~ 79 (577)
T 2ymu_A 10 NRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-G--------QLLQTLTGHSSSVWGVAFSPD-GQTIASASDDK 79 (577)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-S--------CEEEEEECCSSCEEEEEECTT-SSEEEEEETTS
T ss_pred eEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECC-C--------CEEEEEeCCCCCEEEEEECCC-CCEEEEEeCCC
Confidence 3478899999999999999999999999999999953 2 134444 45788999999996 56999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+|+|||+ +|+++.+ |++++|+|.+..+++++.|...
T Consensus 80 ~i~vWd~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~ 122 (577)
T 2ymu_A 80 TVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTV 122 (577)
T ss_dssp CEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEEEC-CCCEEEEEECCCCCEEEEEECCCCCEEEEEcCCCce
Confidence 9999996 6777776 8999999999999999887654
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.49 E-value=1.5e-13 Score=147.15 Aligned_cols=114 Identities=11% Similarity=0.152 Sum_probs=89.9
Q ss_pred eEEeeeeccCCCCCCCC-CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCC
Q 004998 592 LRVKADLNQGDLLNSSN-LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIK 669 (720)
Q Consensus 592 ~~~~~~l~~~~~~~~~~-~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~v~~~~~~~ 669 (720)
++.+.+|+ +|.. .|.+|+|+|||++|||||.|++|+|||+.+.... +.... ..|...|++|+|+|+ +
T Consensus 5 ~~~~~~~~-----~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~-----~~~~~~~~h~~~v~~~~~sp~-g 73 (345)
T 3fm0_A 5 LVLLGRVP-----AHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWI-----CKSVLSEGHQRTVRKVAWSPC-G 73 (345)
T ss_dssp EEEEEEEC-----CSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEE-----EEEEECSSCSSCEEEEEECTT-S
T ss_pred EEEeeeec-----CCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcce-----eeeeeccccCCcEEEEEECCC-C
Confidence 45566665 3455 8999999999999999999999999997654100 11111 245778999999995 5
Q ss_pred CEEEEEeCCCcEEEEECCCCc--EEEE-------EEEEeecCCceEEEecCccceE
Q 004998 670 SQIASSNFEGVVQVGQVLHLI--YFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 670 ~~laS~s~D~~v~lWDv~tg~--~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
++||||+.|++|+|||+.++. ++.+ |++++|+|.+..+++|+.|..-
T Consensus 74 ~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v 129 (345)
T 3fm0_A 74 NYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSV 129 (345)
T ss_dssp SEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeE
Confidence 699999999999999998874 4443 8999999999999999988643
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.49 E-value=3.6e-14 Score=155.09 Aligned_cols=109 Identities=9% Similarity=-0.050 Sum_probs=89.4
Q ss_pred CCCCCCCCCeEEEEECC--------CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEE
Q 004998 601 GDLLNSSNLVCSLSFDR--------DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI 672 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~--------dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~l 672 (720)
+.+.||.+.|++|+|+| ||++|||||.|++|||||+.+.. .......+++.|.+|+|+|+++++|
T Consensus 130 ~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~-------~~~~~~~~~~~v~~v~~~p~~~~~l 202 (393)
T 4gq1_A 130 GGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG-------PILAGYPLSSPGISVQFRPSNPNQL 202 (393)
T ss_dssp CTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE-------EEEEEEECSSCEEEEEEETTEEEEE
T ss_pred cccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc-------eeeeecCCCCCcEEEEECCCCCceE
Confidence 56789999999999998 99999999999999999986541 2234556788999999999877799
Q ss_pred EEEeCCCcEEEEECCCCcEEEE--------------------------------EEEEeec-CCceEEEecCccceE
Q 004998 673 ASSNFEGVVQVGQVLHLIYFSA--------------------------------LYCIVLN-KLLIIFRYGMFQEVK 716 (720)
Q Consensus 673 aS~s~D~~v~lWDv~tg~~~~~--------------------------------v~~v~~~-~~~~~~~~~~~~~~~ 716 (720)
||++.||+|+|||+++++...+ +.++.|+ +.+..+.+++.|..-
T Consensus 203 ~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i 279 (393)
T 4gq1_A 203 IVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAW 279 (393)
T ss_dssp EEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEE
T ss_pred EecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCE
Confidence 9999999999999999876532 4567775 789999999888643
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.49 E-value=2.3e-13 Score=144.82 Aligned_cols=110 Identities=7% Similarity=0.163 Sum_probs=82.6
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
+|...|.+|+|+|+|++|||||.|++|+|||+.......... .++..+ .|...|.+|+|+|+ +.+||||+.|++|+|
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~-~~~~~~~~h~~~V~~v~~sp~-g~~las~s~D~~v~i 133 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEM-DLLAIIEGHENEVKGVAWSND-GYYLATCSRDKSVWI 133 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCC-EEEEEEC----CEEEEEECTT-SCEEEEEETTSCEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccc-eeEEEEcCCCCcEEEEEECCC-CCEEEEEeCCCEEEE
Confidence 378999999999999999999999999999985431110111 133334 45788999999996 569999999999999
Q ss_pred EECCC-C---cEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 684 GQVLH-L---IYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 684 WDv~t-g---~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
||+++ + +++.. |++++|+|.+..+++|+.|..-
T Consensus 134 wd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i 177 (330)
T 2hes_X 134 WETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTV 177 (330)
T ss_dssp EECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCE
T ss_pred EeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeE
Confidence 99943 2 44443 8999999999999999998643
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.48 E-value=3.2e-13 Score=141.61 Aligned_cols=104 Identities=18% Similarity=0.290 Sum_probs=90.1
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
.+|...|.+++|+|||++||||+.|++|+|||+.+.. .+..+ .|...|.+++|+|+ +++||+++.|++|+
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~--------~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~i~ 90 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--------FEKTISGHKLGISDVAWSSD-SNLLVSASDDKTLK 90 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEE
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc--------cchhhccCCCceEEEEEcCC-CCEEEEECCCCEEE
Confidence 4568999999999999999999999999999986541 23333 45778999999995 57999999999999
Q ss_pred EEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 683 VGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 683 lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|||+.+++++.+ |+|++|+|.+..+++|+.|..-
T Consensus 91 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i 131 (312)
T 4ery_A 91 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV 131 (312)
T ss_dssp EEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcE
Confidence 999999998876 8899999999999999988643
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.1e-13 Score=144.77 Aligned_cols=103 Identities=11% Similarity=0.197 Sum_probs=90.2
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
.|...|.+++|+|||++||+|+.|++|+|||+++. .++..+. |...|.+|+|+|+ +.+||||+.|++|+|
T Consensus 162 ~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~--------~~~~~~~~h~~~v~~l~~spd-~~~l~s~s~dg~i~i 232 (321)
T 3ow8_A 162 TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG--------KLLHTLEGHAMPIRSLTFSPD-SQLLVTASDDGYIKI 232 (321)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCCCEEEECTT-SCEEEEECTTSCEEE
T ss_pred CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCC--------cEEEEEcccCCceeEEEEcCC-CCEEEEEcCCCeEEE
Confidence 45788999999999999999999999999998775 2444454 4678999999996 569999999999999
Q ss_pred EECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 684 GQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 684 WDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
||+++++++.+ |++++|+|.+..+++|+.|..-
T Consensus 233 wd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v 272 (321)
T 3ow8_A 233 YDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV 272 (321)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcE
Confidence 99999998876 8999999999999999998643
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=99.48 E-value=2.2e-13 Score=157.75 Aligned_cols=131 Identities=13% Similarity=0.143 Sum_probs=97.9
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEE
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 660 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~ 660 (720)
+...++|.....+.+.++ .+|...|++|+|+|||++|||||.|++|+|||..++.....-....+....|.+.|.
T Consensus 169 D~~v~lwd~~~~~~~~~l-----~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~ 243 (611)
T 1nr0_A 169 DNTVAIFEGPPFKFKSTF-----GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF 243 (611)
T ss_dssp TSCEEEEETTTBEEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEE
T ss_pred CCeEEEEECCCCeEeeee-----ccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEE
Confidence 334555555555555555 456899999999999999999999999999998765210000000011114678999
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------------------------------------------
Q 004998 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA---------------------------------------------- 694 (720)
Q Consensus 661 ~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~---------------------------------------------- 694 (720)
+|+|+|+ +.+|||++.|++|+|||+.+++++.+
T Consensus 244 ~v~~spd-g~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~g 322 (611)
T 1nr0_A 244 GLTWSPD-GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYG 322 (611)
T ss_dssp EEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECC
T ss_pred EEEECCC-CCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcC
Confidence 9999996 56999999999999999998876531
Q ss_pred ----EEEEeecCCceEEEecCccceEE
Q 004998 695 ----LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 695 ----v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|++++|+|.+..+++|+.|..-+
T Consensus 323 h~~~v~~l~~spdg~~l~s~s~D~~v~ 349 (611)
T 1nr0_A 323 HNKAITALSSSADGKTLFSADAEGHIN 349 (611)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCCEEEEEEeCCCCEEEEEeCCCcEE
Confidence 67899999999999999886543
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.48 E-value=2.3e-13 Score=144.88 Aligned_cols=108 Identities=14% Similarity=0.219 Sum_probs=84.2
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|.+.|.+|+|+|||++|||||.|++|+|||+..... ...++..+ .|...|.+|+|+|+ +.+||||+.|++|
T Consensus 103 ~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~----~~~~~~~~~~h~~~v~~v~~~p~-~~~l~s~s~D~~i 177 (330)
T 2hes_X 103 IEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGE----EYECISVLQEHSQDVKHVIWHPS-EALLASSSYDDTV 177 (330)
T ss_dssp EC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCC----CCEEEEEECCCSSCEEEEEECSS-SSEEEEEETTSCE
T ss_pred EcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCC----CeEEEEEeccCCCceEEEEECCC-CCEEEEEcCCCeE
Confidence 356789999999999999999999999999999853211 01233334 45778999999995 5699999999999
Q ss_pred EEEECCCC--cEEEE-------EEEEeecCC--ceEEEecCccce
Q 004998 682 QVGQVLHL--IYFSA-------LYCIVLNKL--LIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWDv~tg--~~~~~-------v~~v~~~~~--~~~~~~~~~~~~ 715 (720)
+|||+.++ +++.+ |++++|+|. +..+++|+.|..
T Consensus 178 ~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~ 222 (330)
T 2hes_X 178 RIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST 222 (330)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSC
T ss_pred EEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCe
Confidence 99999887 56554 899999998 678899988854
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.48 E-value=3.6e-13 Score=146.95 Aligned_cols=123 Identities=10% Similarity=0.152 Sum_probs=102.4
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEE
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 660 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~ 660 (720)
++..++|...+.+++..++ +|...|.+++|+|||++|||||.|++|+|||+++. ..+..+.+...|.
T Consensus 144 d~~i~iwd~~~~~~~~~~~-----~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~--------~~~~~~~~~~~v~ 210 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMILQ-----GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTG--------QCSLTLSIEDGVT 210 (393)
T ss_dssp TSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECSSCEE
T ss_pred CCeEEEEECCCCcEEEEEc-----cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCC--------eeEEEEEcCCCcE
Confidence 4455666666666666654 56899999999999999999999999999998775 2344555677899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------------EEEEeecCCceEEEecCccceE
Q 004998 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 661 ~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~--------------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+++|+|.++.+||+++.||+|+|||+++++.+.. |++++|++.+..+++|+.|..-
T Consensus 211 ~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v 280 (393)
T 1erj_A 211 TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSV 280 (393)
T ss_dssp EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEE
Confidence 9999997778999999999999999999987653 7899999999999999998643
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.48 E-value=3.2e-13 Score=145.34 Aligned_cols=123 Identities=12% Similarity=0.059 Sum_probs=97.8
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC---CC
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS---RS 657 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~ 657 (720)
++..++|...+.+.+..+ .+|.+.|++|+|+|+|.+|||||.|++|+|||+++.. ++..+.. ..
T Consensus 219 Dg~v~~wd~~~~~~~~~~-----~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~--------~~~~~~~~~~~~ 285 (354)
T 2pbi_B 219 DKKAMVWDMRSGQCVQAF-----ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR--------EVAIYSKESIIF 285 (354)
T ss_dssp TSCEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------EEEEECCTTCCS
T ss_pred CCeEEEEECCCCcEEEEe-----cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--------EEEEEcCCCccc
Confidence 334445555444444444 4568999999999999999999999999999987641 2222222 34
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 658 ~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.+++++|+|+ +.+||+++.|++|+|||+.+|+.+.+ |++++|+|.+..+++|+.|..-+
T Consensus 286 ~~~~~~~s~~-g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~ 351 (354)
T 2pbi_B 286 GASSVDFSLS-GRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLR 351 (354)
T ss_dssp CEEEEEECTT-SSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred ceeEEEEeCC-CCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEE
Confidence 6899999995 56999999999999999999998876 89999999999999999997544
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.48 E-value=1.2e-13 Score=152.80 Aligned_cols=108 Identities=10% Similarity=0.051 Sum_probs=87.0
Q ss_pred CCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 605 NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
.|...|+||+|+| ++.+|||||.|++|+|||+.+... ...+....|.+.|++|+|+|.++++|+|||.||+|+|
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~-----~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK-----PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC-----CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc-----eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 4578899999999 567999999999999999876521 1111223568899999999977889999999999999
Q ss_pred EECCCCcEEEE---------EEEEeecCCceEEEecCccceEE
Q 004998 684 GQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 684 WDv~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
||++++..... +.+++|++.+.++++|+.|..-+
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~ 234 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVI 234 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEE
T ss_pred eeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEe
Confidence 99988754322 57899999999999999876443
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.47 E-value=4.2e-13 Score=140.71 Aligned_cols=121 Identities=12% Similarity=0.148 Sum_probs=98.2
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEE
Q 004998 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLS 660 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~ 660 (720)
+..++|.....+....+ .+|...|.+++|+|||++||+||.|++|+|||+.+. .++..+ .|...|.
T Consensus 45 g~i~iw~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~--------~~~~~~~~~~~~v~ 111 (312)
T 4ery_A 45 KLIKIWGAYDGKFEKTI-----SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSG--------KCLKTLKGHSNYVF 111 (312)
T ss_dssp SCEEEEETTTCCEEEEE-----CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCEE
T ss_pred CeEEEEeCCCcccchhh-----ccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCC--------cEEEEEcCCCCCEE
Confidence 34445544444444444 456889999999999999999999999999998765 234444 3577899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 661 ~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+++|+|+ +++|||++.||+|+|||+++++++.+ |.+++|++.+..+.+|+.|..-
T Consensus 112 ~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
T 4ery_A 112 CCNFNPQ-SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 173 (312)
T ss_dssp EEEECSS-SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEcCC-CCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence 9999995 56999999999999999999998876 8999999999999999988643
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.46 E-value=1.9e-13 Score=145.25 Aligned_cols=107 Identities=9% Similarity=0.013 Sum_probs=78.2
Q ss_pred CCCCCCeEEEEECC---CCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CC---CCEEEEE-------------
Q 004998 604 LNSSNLVCSLSFDR---DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SR---SKLSSIC------------- 663 (720)
Q Consensus 604 ~~~~~~V~sv~f~~---dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~---~~i~~v~------------- 663 (720)
.+|+..|+.++|++ |+++|||||.|++|||||+.++. .+..+. ++ ..|.+++
T Consensus 175 ~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk--------~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~ 246 (356)
T 2w18_A 175 FLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQ--------LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSH 246 (356)
T ss_dssp EECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCC--------EEEEEECCC---CCCEEEEEEETTEEEEEEC-
T ss_pred ccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCc--------EEEEEcCCCcceeeeEEEEECCCCCEEEEecc
Confidence 34588899999998 77999999999999999998762 111111 00 0111111
Q ss_pred ------------------EecCC-------------CC------------EEEEEeCCCcEEEEECCCCcEEEE------
Q 004998 664 ------------------WNSYI-------------KS------------QIASSNFEGVVQVGQVLHLIYFSA------ 694 (720)
Q Consensus 664 ------------------~~~~~-------------~~------------~laS~s~D~~v~lWDv~tg~~~~~------ 694 (720)
|++.. ++ ++||++.|++|||||+.+|+++.+
T Consensus 247 ~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~ 326 (356)
T 2w18_A 247 PCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSD 326 (356)
T ss_dssp -----------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--
T ss_pred CCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCC
Confidence 33221 11 579999999999999999999987
Q ss_pred -EE-EEeecCCceEEEecCccceEEc
Q 004998 695 -LY-CIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 695 -v~-~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
+. +++|+|.+.++++|+.|.--++
T Consensus 327 ~vvs~vafSPDG~~LaSGS~D~TIkl 352 (356)
T 2w18_A 327 QHWSFVKWSGTDSHLLAGQKDGNIFV 352 (356)
T ss_dssp CCCCEEEECSSSSEEEEECTTSCEEE
T ss_pred CeEEEEEECCCCCEEEEEECCCcEEE
Confidence 34 5899999999999999976543
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.45 E-value=4e-13 Score=143.86 Aligned_cols=106 Identities=12% Similarity=0.127 Sum_probs=88.0
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
.+|...|.+|+|+|||++|||||.|++|+|||+..... .++..+ .|...|.+|+|+|+ +++||||+.|++|+
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~------~~~~~~~~h~~~v~~v~~sp~-~~~l~s~s~D~~v~ 130 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDF------ECVTTLEGHENEVKSVAWAPS-GNLLATCSRDKSVW 130 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-E------EEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEE
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCe------EEEEEccCCCCCceEEEEeCC-CCEEEEEECCCeEE
Confidence 46899999999999999999999999999999765411 123334 45788999999995 57999999999999
Q ss_pred EEECCCCcE---EEE-------EEEEeecCCceEEEecCccceE
Q 004998 683 VGQVLHLIY---FSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 683 lWDv~tg~~---~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|||+.++.. +.. |.+++|+|.+.++++|+.|...
T Consensus 131 iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i 174 (345)
T 3fm0_A 131 VWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTV 174 (345)
T ss_dssp EEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCE
T ss_pred EEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcE
Confidence 999988743 332 8999999999999999988643
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.45 E-value=8.7e-13 Score=143.75 Aligned_cols=115 Identities=10% Similarity=0.121 Sum_probs=95.3
Q ss_pred CCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCC
Q 004998 602 DLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
.+.+|.+.|.+++|+| ++.+||||+.|++|+|||+.+.... .....++..+ .|...|.+|+|+|++.++|||++.||
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~-~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 154 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV-LPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDN 154 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS-SCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTS
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc-cccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCC
Confidence 4667899999999999 9999999999999999998765211 1111344444 46788999999998768999999999
Q ss_pred cEEEEECCCCcEEEE---------EEEEeecCCceEEEecCccceEE
Q 004998 680 VVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|+|||+.+++++.+ |++++|++.+..+++|+.|..-+
T Consensus 155 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 201 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVR 201 (402)
T ss_dssp CEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred EEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEE
Confidence 999999999988765 68999999999999999886443
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.45 E-value=5.9e-13 Score=144.56 Aligned_cols=130 Identities=8% Similarity=0.091 Sum_probs=104.4
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCC
Q 004998 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRS 657 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~ 657 (720)
.++.+++|...+.+.+..+...-..+|...|.+++|++ ++.+|||||.|++|+|||++... .++..+ .|.+
T Consensus 178 ~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~-------~~~~~~~~h~~ 250 (380)
T 3iz6_a 178 GDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS-------RAVRTYHGHEG 250 (380)
T ss_dssp TTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC-------CCCEEECCCSS
T ss_pred CCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC-------cceEEECCcCC
Confidence 44566777776666666665434467899999999987 88999999999999999986431 234444 4578
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------------EEEEeecCCceEEEecCccceEE
Q 004998 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 658 ~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~--------------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.|++|+|+|+ +.+||||+.||+|+|||+++|+++.. |++++|++.+.++..|+-|..-+
T Consensus 251 ~v~~v~~~p~-~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~ 323 (380)
T 3iz6_a 251 DINSVKFFPD-GQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCY 323 (380)
T ss_dssp CCCEEEECTT-SSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEE
T ss_pred CeEEEEEecC-CCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEE
Confidence 8999999995 56999999999999999999998875 57899999999999998775433
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.44 E-value=6.8e-13 Score=142.78 Aligned_cols=105 Identities=9% Similarity=0.007 Sum_probs=91.6
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecC-CCCEEEEEeCCCcE
Q 004998 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-IKSQIASSNFEGVV 681 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~-~~~~laS~s~D~~v 681 (720)
.+|.+.|.+++|+|++.+|+|||.|++|+|||+.+. .++..+ .|...|.+++|+|. .+++||||+.||+|
T Consensus 151 ~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~--------~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v 222 (354)
T 2pbi_B 151 AMHTNYLSACSFTNSDMQILTASGDGTCALWDVESG--------QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKA 222 (354)
T ss_dssp EECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCE
T ss_pred eccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCC--------eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeE
Confidence 457899999999999999999999999999998776 244444 35778999999985 35799999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 682 ~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
++||+++++++.+ |++++|+|.+..+++|+.|..-
T Consensus 223 ~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v 264 (354)
T 2pbi_B 223 MVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATC 264 (354)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeE
Confidence 9999999999876 8999999999999999988643
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.44 E-value=4e-13 Score=145.90 Aligned_cols=107 Identities=12% Similarity=0.101 Sum_probs=89.2
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec--------CCCCEEEEEEecCCCCEEE
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA--------SRSKLSSICWNSYIKSQIA 673 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--------~~~~i~~v~~~~~~~~~la 673 (720)
.+.+|.+.|++|+|+|||.+|||||.|++|+|||+++.. ++..+. +...|++++|+|+ +.+||
T Consensus 244 ~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~--------~~~~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~ 314 (380)
T 3iz6_a 244 TYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH--------QLQVYNREPDRNDNELPIVTSVAFSIS-GRLLF 314 (380)
T ss_dssp EECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTE--------EEEEECCCCSSSCCSSCSCSEEEECSS-SSEEE
T ss_pred EECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCc--------EEEEecccccccccccCceEEEEECCC-CCEEE
Confidence 356789999999999999999999999999999998752 122111 1234899999996 56999
Q ss_pred EEeCCCcEEEEECCCCcEEEE-----------EEEEeecCCceEEEecCccceEE
Q 004998 674 SSNFEGVVQVGQVLHLIYFSA-----------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 674 S~s~D~~v~lWDv~tg~~~~~-----------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|+.||+|+|||+.+++.+.. |+|++|+|.+..+++|+.|..-.
T Consensus 315 ~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~ 369 (380)
T 3iz6_a 315 AGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLK 369 (380)
T ss_dssp EECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEE
T ss_pred EEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEE
Confidence 999999999999999987754 78999999999999999996543
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.44 E-value=3.6e-13 Score=145.76 Aligned_cols=109 Identities=6% Similarity=-0.020 Sum_probs=89.3
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCC----cEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCCCEEEEEeC
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNK----KIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIKSQIASSNF 677 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~----~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~v~~~~~~~~~laS~s~ 677 (720)
..+|...|++|+|+|||+++++|+.|+ +|++||........ ..... ..+...|++|+|+|+ +.+||+|+.
T Consensus 215 ~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~V~~~~~Spd-g~~lasgs~ 289 (365)
T 4h5i_A 215 DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSV----LRSKQVTNRFKGITSMDVDMK-GELAVLASN 289 (365)
T ss_dssp CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEE----EEEEEEESSCSCEEEEEECTT-SCEEEEEET
T ss_pred cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecc----eeeeeecCCCCCeEeEEECCC-CCceEEEcC
Confidence 345788999999999999999999988 68888865431110 01222 345678999999996 469999999
Q ss_pred CCcEEEEECCCCcEEEE--------EEEEeecCCceEEEecCccceE
Q 004998 678 EGVVQVGQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 678 D~~v~lWDv~tg~~~~~--------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|++|+|||+.+++++.+ |++|+|+|++.++++||.|.--
T Consensus 290 D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tv 336 (365)
T 4h5i_A 290 DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTI 336 (365)
T ss_dssp TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeE
Confidence 99999999999999886 8999999999999999999754
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.44 E-value=7.9e-13 Score=138.32 Aligned_cols=111 Identities=19% Similarity=0.161 Sum_probs=90.2
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecC-CCCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~-~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+|+|+|||++||||+.|++|+|||+.+.... ..++..+ .|...|.+|+|+|. ++++||+++.||+
T Consensus 7 ~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSN----WELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCC----EEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred CcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCc----ceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 4678999999999999999999999999999998764211 1123333 46788999999995 3679999999999
Q ss_pred EEEEECCCC---------cEEEE-------EEEEeecCC--ceEEEecCccceEE
Q 004998 681 VQVGQVLHL---------IYFSA-------LYCIVLNKL--LIIFRYGMFQEVKY 717 (720)
Q Consensus 681 v~lWDv~tg---------~~~~~-------v~~v~~~~~--~~~~~~~~~~~~~~ 717 (720)
|+|||+.++ +.+.. |++++|++. +..+.+|+.|..-+
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~ 137 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILR 137 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEE
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEE
Confidence 999999987 44444 899999999 99999988876433
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.44 E-value=7.6e-13 Score=139.30 Aligned_cols=121 Identities=9% Similarity=0.154 Sum_probs=99.5
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEE
Q 004998 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSS 661 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~ 661 (720)
...+++...+.+++..+. +|.+.|.+|+|+|||++|||||.|++|+|||+.+. .++..+.+...|.+
T Consensus 195 ~~i~i~d~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~--------~~~~~~~~~~~v~~ 261 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHI-----GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG--------KHLYTLDGGDIINA 261 (340)
T ss_dssp SCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT--------EEEEEEECSSCEEE
T ss_pred CEEEEEECCCCceeeEec-----CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC--------ceeeeecCCceEEe
Confidence 344566666666666664 45889999999999999999999999999998775 35666777788999
Q ss_pred EEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------------EEEEeecCCceEEEecCccceEE
Q 004998 662 ICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA----------------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 662 v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~----------------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
++|+|+ + .+++++.|++|+|||++++..+.+ |++++|+|.+.++++|+.|..-+
T Consensus 262 ~~~~~~-~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~ 331 (340)
T 4aow_A 262 LCFSPN-R-YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVR 331 (340)
T ss_dssp EEECSS-S-SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eecCCC-C-ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 999995 3 456667799999999999877654 89999999999999999987544
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.43 E-value=1.5e-12 Score=136.96 Aligned_cols=119 Identities=9% Similarity=0.091 Sum_probs=95.1
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecC
Q 004998 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSY 667 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~ 667 (720)
.++++..+| .||.+.|++|+|+|+ +++|||||.|++|||||+.+.... ...|+..+. |...|++++|+|+
T Consensus 26 ~~~~l~~tL-----~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~---~~~~~~~l~~h~~~V~~~~~s~d 97 (340)
T 4aow_A 26 EQMTLRGTL-----KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN---YGIPQRALRGHSHFVSDVVISSD 97 (340)
T ss_dssp CEEEEEEEE-----CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC---SEEEEEEECCCSSCEEEEEECTT
T ss_pred CceEEEEEE-----CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc---cceeeEEEeCCCCCEEEEEECCC
Confidence 445555555 567999999999998 689999999999999998764211 113444444 4788999999995
Q ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 668 IKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 668 ~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+.+|||++.|++|++||...+..... +.++.+++.+..+++|+.|....
T Consensus 98 -g~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~ 153 (340)
T 4aow_A 98 -GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK 153 (340)
T ss_dssp -SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred -CCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEE
Confidence 56999999999999999999887765 77889999999999998876543
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=99.42 E-value=1.5e-12 Score=137.73 Aligned_cols=124 Identities=9% Similarity=0.029 Sum_probs=100.3
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCE
Q 004998 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKL 659 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i 659 (720)
.++..++|...+.+.+..+. +|...|.+|+|+|++.+|||||.|++|+|||++.. +......|...|
T Consensus 85 ~D~~v~~wd~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~--------~~~~~~~h~~~v 151 (319)
T 3frx_A 85 WDKTLRLWDVATGETYQRFV-----GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ--------CLATLLGHNDWV 151 (319)
T ss_dssp TTSEEEEEETTTTEEEEEEE-----CCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC--------EEEEECCCSSCE
T ss_pred CCCEEEEEECCCCCeeEEEc-----cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--------eEEEEeccCCcE
Confidence 34456667666666666654 56899999999999999999999999999998543 122233557889
Q ss_pred EEEEEecCC-----CCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 660 SSICWNSYI-----KSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 660 ~~v~~~~~~-----~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.+++|+|.. ..+|+|++.|++|++||+++++...+ |++++|+|.+.++++|+.|..-
T Consensus 152 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i 220 (319)
T 3frx_A 152 SQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEI 220 (319)
T ss_dssp EEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEE
T ss_pred EEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 999999853 34899999999999999999988765 8999999999999999988643
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.42 E-value=4.1e-13 Score=145.28 Aligned_cols=79 Identities=14% Similarity=0.138 Sum_probs=68.3
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cCCCCEEEEEEecCCCCEEEEEeCCC
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
.+.+|...|++|+|+|||++||+||.|++|+|||+.++ .++..+ .|...|++|+|+|+ +.+|||||.|+
T Consensus 264 ~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~--------~~~~~~~~gH~~~V~~v~fSpd-g~~laS~S~D~ 334 (365)
T 4h5i_A 264 QVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL--------SMSKIFKQAHSFAITEVTISPD-STYVASVSAAN 334 (365)
T ss_dssp EEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT--------EEEEEETTSSSSCEEEEEECTT-SCEEEEEETTS
T ss_pred eecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC--------cEEEEecCcccCCEEEEEECCC-CCEEEEEeCCC
Confidence 45567899999999999999999999999999998876 355543 35788999999996 46999999999
Q ss_pred cEEEEECCCC
Q 004998 680 VVQVGQVLHL 689 (720)
Q Consensus 680 ~v~lWDv~tg 689 (720)
||||||+.++
T Consensus 335 tvrvw~ip~~ 344 (365)
T 4h5i_A 335 TIHIIKLPLN 344 (365)
T ss_dssp EEEEEECCTT
T ss_pred eEEEEEcCCC
Confidence 9999999754
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.41 E-value=2.3e-12 Score=140.53 Aligned_cols=100 Identities=11% Similarity=0.158 Sum_probs=86.3
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
...|.+|+|+|||++||||+.|++|+|||+.+. .++..+ .|...|.+++|+|+ +.+|+|++.|++|+|||
T Consensus 123 ~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~--------~~~~~~~~h~~~v~~~~~~p~-~~~l~s~s~d~~v~iwd 193 (393)
T 1erj_A 123 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIENR--------KIVMILQGHEQDIYSLDYFPS-GDKLVSGSGDRTVRIWD 193 (393)
T ss_dssp CCBEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEE
T ss_pred ceeEEEEEECCCCCEEEEEcCCCeEEEEECCCC--------cEEEEEccCCCCEEEEEEcCC-CCEEEEecCCCcEEEEE
Confidence 446999999999999999999999999998765 233344 35778999999996 46999999999999999
Q ss_pred CCCCcEEEE------EEEEeecC-CceEEEecCccce
Q 004998 686 VLHLIYFSA------LYCIVLNK-LLIIFRYGMFQEV 715 (720)
Q Consensus 686 v~tg~~~~~------v~~v~~~~-~~~~~~~~~~~~~ 715 (720)
+++++++.+ +.+++|++ .+..+++|+.|..
T Consensus 194 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~ 230 (393)
T 1erj_A 194 LRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRA 230 (393)
T ss_dssp TTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSC
T ss_pred CCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCc
Confidence 999998765 78999999 8999999988764
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.41 E-value=6.7e-13 Score=143.09 Aligned_cols=128 Identities=13% Similarity=0.048 Sum_probs=101.3
Q ss_pred hhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCC
Q 004998 579 FLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS 657 (720)
Q Consensus 579 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 657 (720)
..++..++|...+.+++..++ +|...|++|+|+|++. +|++++.|++|+|||+++..... .+....+..
T Consensus 158 s~dg~v~iwd~~~~~~~~~~~-----~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~-----~~~~~~~~~ 227 (357)
T 4g56_B 158 GKDFSVKVWDLSQKAVLKSYN-----AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPAT-----RIDFCASDT 227 (357)
T ss_dssp ETTSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBC-----BCCCTTCCS
T ss_pred eCCCeEEEEECCCCcEEEEEc-----CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceee-----eeeeccccc
Confidence 344556677777777777665 4589999999999986 79999999999999987752110 011112356
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCc-eEEEecCccceE
Q 004998 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLL-IIFRYGMFQEVK 716 (720)
Q Consensus 658 ~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~-~~~~~~~~~~~~ 716 (720)
.|.+|+|+|+.+.+||+|+.|++|+|||+++++++.+ |++++|+|.+ .++++|+.|..-
T Consensus 228 ~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i 294 (357)
T 4g56_B 228 IPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTV 294 (357)
T ss_dssp CEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred cccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEE
Confidence 7999999998888999999999999999999998876 8999999987 578899887643
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.41 E-value=1.4e-12 Score=139.27 Aligned_cols=124 Identities=12% Similarity=0.126 Sum_probs=96.1
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe---cCC
Q 004998 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASR 656 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~ 656 (720)
.++..++|...+.+.+..+. +|...|.+|+|+|||++|||||.|++|+|||+.... ..... .+.
T Consensus 96 ~D~~v~lwd~~~~~~~~~~~-----~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~--------~~~~~~~~~~~ 162 (343)
T 2xzm_R 96 WDKTLRLWDLRTGTTYKRFV-----GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC--------KFSSAEKENHS 162 (343)
T ss_dssp TTSEEEEEETTSSCEEEEEE-----CCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE--------EEECCTTTSCS
T ss_pred CCCcEEEEECCCCcEEEEEc-----CCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc--------eeeeecccCCC
Confidence 34556666666666555553 568999999999999999999999999999986321 11111 346
Q ss_pred CCEEEEEEecCCC---------CEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 657 SKLSSICWNSYIK---------SQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 657 ~~i~~v~~~~~~~---------~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
..|.+++|+|+.. .+|||++.||+|+|||. +++.+.+ |++++|+|.+.++++|+.|..-+
T Consensus 163 ~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~ 238 (343)
T 2xzm_R 163 DWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLL 238 (343)
T ss_dssp SCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred ceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEE
Confidence 7899999999752 68999999999999994 4555443 89999999999999999886543
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.40 E-value=2.5e-12 Score=136.42 Aligned_cols=102 Identities=8% Similarity=0.060 Sum_probs=89.5
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|.+.|.+++|+|||++||+|+.|++|+|||+.+. .++..+. |...|.+++|+|+ +++||+++.||+|
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~--------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~dg~i 98 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNG--------ERLGTLDGHTGTIWSIDVDCF-TKYCVTGSADYSI 98 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTC--------CEEEEECCCSSCEEEEEECTT-SSEEEEEETTTEE
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc--------hhhhhhhhcCCcEEEEEEcCC-CCEEEEEeCCCeE
Confidence 3456999999999999999999999999999998765 2444454 5788999999995 5799999999999
Q ss_pred EEEECCCCcEEEE------EEEEeecCCceEEEecCcc
Q 004998 682 QVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 682 ~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~~ 713 (720)
+|||+.+++++.. +.+++|++.+..+..+..+
T Consensus 99 ~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 136 (369)
T 3zwl_B 99 KLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDN 136 (369)
T ss_dssp EEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECC
T ss_pred EEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCC
Confidence 9999999999887 8999999999999988766
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=99.40 E-value=2.1e-12 Score=149.54 Aligned_cols=107 Identities=11% Similarity=0.095 Sum_probs=91.2
Q ss_pred CCCCCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCC
Q 004998 601 GDLLNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D 678 (720)
+.+.+|...|++|+|+|++. +|||||.|++|+|||..+. ..+..+ .|...|.+|+|+|+ +.+|||++.|
T Consensus 141 ~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~--------~~~~~l~~H~~~V~~v~fspd-g~~las~s~D 211 (611)
T 1nr0_A 141 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF--------KFKSTFGEHTKFVHSVRYNPD-GSLFASTGGD 211 (611)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB--------EEEEEECCCSSCEEEEEECTT-SSEEEEEETT
T ss_pred ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC--------eEeeeeccccCceEEEEECCC-CCEEEEEECC
Confidence 45788999999999999997 5999999999999997654 123333 45778999999996 5699999999
Q ss_pred CcEEEEECCCCcEEEE--------------EEEEeecCCceEEEecCccceE
Q 004998 679 GVVQVGQVLHLIYFSA--------------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 679 ~~v~lWDv~tg~~~~~--------------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
++|+|||+.+|+++.+ |++++|+|.+..+++|+.|..-
T Consensus 212 ~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v 263 (611)
T 1nr0_A 212 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTI 263 (611)
T ss_dssp SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeE
Confidence 9999999999987643 7899999999999999998643
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.40 E-value=2.6e-12 Score=134.34 Aligned_cols=109 Identities=13% Similarity=0.103 Sum_probs=87.9
Q ss_pred CCCCCCCeEEEEECCC--CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCC------------
Q 004998 603 LLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI------------ 668 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~------------ 668 (720)
+.+|...|.+|+|+|+ |.+||+|+.|++|+|||+.+.... .+.....|...|.+++|+|+.
T Consensus 95 ~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~-----~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~ 169 (297)
T 2pm7_B 95 HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT-----SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKE 169 (297)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB-----CCEEEECCSSCEEEEEECCCC------------
T ss_pred eecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce-----eeeeeecccCccceEeecCCcccccccCCCCCC
Confidence 3467899999999998 899999999999999998754110 122334567789999999963
Q ss_pred CCEEEEEeCCCcEEEEECCCCc----EEEE-------EEEEeecCCc---eEEEecCccceE
Q 004998 669 KSQIASSNFEGVVQVGQVLHLI----YFSA-------LYCIVLNKLL---IIFRYGMFQEVK 716 (720)
Q Consensus 669 ~~~laS~s~D~~v~lWDv~tg~----~~~~-------v~~v~~~~~~---~~~~~~~~~~~~ 716 (720)
+.+||||+.|++|+|||+++++ .+.+ |++|+|+|.+ .++++|+.|..-
T Consensus 170 ~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v 231 (297)
T 2pm7_B 170 SRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTC 231 (297)
T ss_dssp CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCE
T ss_pred cceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcE
Confidence 4689999999999999998876 4433 8999999984 899999988643
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.39 E-value=1.7e-12 Score=139.71 Aligned_cols=104 Identities=14% Similarity=0.141 Sum_probs=85.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCc-EEEeeCCcccccccccccceEEec---CCCCEEEEEEecCCCCEEEEEeCC
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKK-IKVFECDAIINENRDIHYPVVEMA---SRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~---~~~~i~~v~~~~~~~~~laS~s~D 678 (720)
+.+|.+.|.+|+|+|||++|||||.|++ |+|||+.+. .++..+. |...|.+|+|+|+ +.+|||++.|
T Consensus 191 ~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~--------~~~~~~~~g~h~~~v~~~~~s~~-~~~l~s~s~d 261 (355)
T 3vu4_A 191 IKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG--------VLVREFRRGLDRADVVDMKWSTD-GSKLAVVSDK 261 (355)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTC--------CEEEEEECTTCCSCEEEEEECTT-SCEEEEEETT
T ss_pred EEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCC--------cEEEEEEcCCCCCcEEEEEECCC-CCEEEEEECC
Confidence 3567999999999999999999999999 999998876 2444554 6788999999996 5699999999
Q ss_pred CcEEEEECCCCcEEE--E----------------------------EEEEeecCCceEEEecCccce
Q 004998 679 GVVQVGQVLHLIYFS--A----------------------------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 679 ~~v~lWDv~tg~~~~--~----------------------------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
++|+|||+.++.... . ..+++|++.+..++.|.-|-.
T Consensus 262 ~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~ 328 (355)
T 3vu4_A 262 WTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRM 328 (355)
T ss_dssp CEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTE
T ss_pred CEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCe
Confidence 999999998663110 0 156899999999998887753
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.39 E-value=3.4e-12 Score=135.31 Aligned_cols=108 Identities=10% Similarity=0.158 Sum_probs=90.3
Q ss_pred CCCCCCCeEEEEECCC---CCEEEEeeCCCcEEEeeCCcccccccccccc-eEEecCCCCEEEEEEecCCCCEEEEEeCC
Q 004998 603 LLNSSNLVCSLSFDRD---GELFAAAGVNKKIKVFECDAIINENRDIHYP-VVEMASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d---g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~i~~v~~~~~~~~~laS~s~D 678 (720)
+.+|.+.|++|+|+|+ |++||+|+.|++|+|||+.+... .. .....|...|.+|+|+|+ +++||+++.|
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~~~d 107 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ------TIPKAQQMHTGPVLDVCWSDD-GSKVFTASCD 107 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC------EEEEEEEECSSCEEEEEECTT-SSEEEEEETT
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc------eeEEEeccccCCEEEEEECcC-CCEEEEEcCC
Confidence 3567999999999999 69999999999999999876210 11 223346888999999995 5699999999
Q ss_pred CcEEEEECCCCcEEEE------EEEEee--cCCceEEEecCccceEE
Q 004998 679 GVVQVGQVLHLIYFSA------LYCIVL--NKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 679 ~~v~lWDv~tg~~~~~------v~~v~~--~~~~~~~~~~~~~~~~~ 717 (720)
|+|+|||+.+++.+.. |++++| ++.+..+.+|+.|..-+
T Consensus 108 g~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~ 154 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLK 154 (368)
T ss_dssp SEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEE
T ss_pred CcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEE
Confidence 9999999999998775 899999 99999999999886543
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.38 E-value=2.6e-12 Score=136.31 Aligned_cols=126 Identities=7% Similarity=-0.021 Sum_probs=100.9
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCC----CCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCC
Q 004998 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRD----GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRS 657 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~d----g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~ 657 (720)
-.++|...+.+.+..++......|...|.+++|+|+ |.+||+|+.|++|+|||+.+. .++..+. |..
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~--------~~~~~~~~~~~ 116 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITM--------QCIKHYVGHGN 116 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTC--------CEEEEEESCCS
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhc--------eEeeeecCCCC
Confidence 345555555555555552222346788999999999 779999999999999998765 2444444 678
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------EEEEeecCCceEEEecCccceE
Q 004998 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 658 ~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.|.+++|+|.++++||+++.||+|+|||+++++.+.. |++++|++.+..+++|+.|..-
T Consensus 117 ~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 185 (366)
T 3k26_A 117 AINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSL 185 (366)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred cEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCE
Confidence 8999999996678999999999999999999988765 7999999999999999988543
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.38 E-value=1.7e-12 Score=138.40 Aligned_cols=108 Identities=13% Similarity=0.151 Sum_probs=88.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecC-CCCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-IKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~-~~~~laS~s~D~~ 680 (720)
+.+|.+.|.+++|+|||++||+|+.|++|+|||+..... .++..+ .|...|++|+|+|+ ++++|||++.||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~------~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE------EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcc------eeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 346799999999999999999999999999999863210 233344 35788999999874 2679999999999
Q ss_pred EEEEECCCCc--EEEE-------EEEEeecCC--ceEEEecCccceE
Q 004998 681 VQVGQVLHLI--YFSA-------LYCIVLNKL--LIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWDv~tg~--~~~~-------v~~v~~~~~--~~~~~~~~~~~~~ 716 (720)
|+|||+.+++ .+.. |++++|+|. +..+.+|+.|..-
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i 127 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKV 127 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcE
Confidence 9999999997 4443 899999999 8999999888643
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.2e-12 Score=151.35 Aligned_cols=112 Identities=8% Similarity=0.054 Sum_probs=91.9
Q ss_pred CCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceE-EecCCCCEEEEEEecCCCCEEEEEeCC
Q 004998 601 GDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVV-EMASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~i~~v~~~~~~~~~laS~s~D 678 (720)
+.+.+|.+.|++|+|+|++ .+|||||.|++|+|||+.+..... ..+.. ...|...|.+|+|+|+ +.+||||+.|
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~---~~~~~~~~~h~~~v~~v~~s~~-g~~l~sgs~D 451 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY---GVAQRRLTGHSHFVEDVVLSSD-GQFALSGSWD 451 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS---CEEEEEEECCSSCEEEEEECTT-SSEEEEEETT
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc---ccccceecCCCCcEEEEEECCC-CCEEEEEeCC
Confidence 4456779999999999876 799999999999999987541110 01222 3356788999999995 5699999999
Q ss_pred CcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 679 GVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 679 ~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+|+|||+.+++++.+ |+|++|++.+..+++|+.|..-
T Consensus 452 g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i 496 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTI 496 (694)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCE
T ss_pred CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEE
Confidence 9999999999998876 8999999999999999988643
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.35 E-value=8.6e-13 Score=150.11 Aligned_cols=107 Identities=11% Similarity=0.085 Sum_probs=87.0
Q ss_pred CCCCCCCeEEE--EECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEecC-C-CCEEEEEEecCCCCEEEEEeC
Q 004998 603 LLNSSNLVCSL--SFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-R-SKLSSICWNSYIKSQIASSNF 677 (720)
Q Consensus 603 ~~~~~~~V~sv--~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~-~~i~~v~~~~~~~~~laS~s~ 677 (720)
+.+|...|.+| +|+|+| .+|||||.|++|||||+++.. ++.....+ . ..|.+|+|+|++ ..||+++.
T Consensus 304 ~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~-------~~~~~~~~~~~~~v~~v~fsp~~-~~l~s~~~ 375 (524)
T 2j04_B 304 DQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIA-------TTKTTVSRFRGSNLVPVVYCPQI-YSYIYSDG 375 (524)
T ss_dssp EECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHH-------HHCEEEEECSCCSCCCEEEETTT-TEEEEECS
T ss_pred eecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCC-------cccccccccccCcccceEeCCCc-CeEEEeCC
Confidence 34678999999 689998 899999999999999987642 11112222 1 358999999964 58999999
Q ss_pred CCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 678 EGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 678 D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|++|+|||+++++++.+ |++|+|+|.+..+++|+.|.--.
T Consensus 376 d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~ 422 (524)
T 2j04_B 376 ASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLI 422 (524)
T ss_dssp SSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEE
T ss_pred CCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEE
Confidence 99999999999987654 89999999999999999997544
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=99.35 E-value=3.6e-12 Score=145.00 Aligned_cols=104 Identities=14% Similarity=0.182 Sum_probs=88.2
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+++|+|||++||||+.|++|+|||.... ++..+ .|...|++|+|+|+ +.+|||++.||+|
T Consensus 463 ~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~~---------~~~~~~~h~~~v~~l~~s~d-g~~l~s~~~dg~v 532 (577)
T 2ymu_A 463 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ---------LLQTLTGHSSSVRGVAFSPD-GQTIASASDDKTV 532 (577)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTSC---------EEEEEECCSSCEEEEEECTT-SSCEEEEETTSEE
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCCC---------EEEEEeCCCCCEEEEEEcCC-CCEEEEEECcCEE
Confidence 4467899999999999999999999999999995322 33333 45788999999996 4699999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 682 ~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|||. +|+++.+ |++++|+|++..+++|+-|..-.
T Consensus 533 ~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~ 574 (577)
T 2ymu_A 533 KLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVK 574 (577)
T ss_dssp EEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred EEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEE
Confidence 99996 7888776 89999999999999999987543
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.34 E-value=5.8e-12 Score=134.31 Aligned_cols=103 Identities=15% Similarity=-0.018 Sum_probs=85.7
Q ss_pred CCCCCeEEEEECC--CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 605 NSSNLVCSLSFDR--DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 605 ~~~~~V~sv~f~~--dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
+|...|.+++|+| +|++|||||.|++|+|||+.+.. ++... .+...|.+++|+|+ +.+||+|+.||+
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~--------~~~~~~~~~~~~i~~~~~~pd-g~~lasg~~dg~ 193 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS--------QYIVHSAKSDVEYSSGVLHKD-SLLLALYSPDGI 193 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC--------EEEEECCCSSCCCCEEEECTT-SCEEEEECTTSC
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc--------EEEEEecCCCCceEEEEECCC-CCEEEEEcCCCE
Confidence 4568899999999 99999999999999999988652 22222 23557999999995 569999999999
Q ss_pred EEEEECCCCcEE-EE--------EEEEeecCCceEEEecCccceE
Q 004998 681 VQVGQVLHLIYF-SA--------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWDv~tg~~~-~~--------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+|||+++++.+ .+ |++++|+|.+..+++|+-+.++
T Consensus 194 i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~ 238 (343)
T 3lrv_A 194 LDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVV 238 (343)
T ss_dssp EEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEE
T ss_pred EEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEE
Confidence 999999999877 33 8999999999999999966554
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.34 E-value=2.4e-12 Score=142.94 Aligned_cols=110 Identities=15% Similarity=0.186 Sum_probs=87.6
Q ss_pred CCCCeEEEEECCCCCEEE----EeeCCCcEEEeeCCcccccccccccce---EEe-cCCCCEEEEEEecCCCCEEEEEeC
Q 004998 606 SSNLVCSLSFDRDGELFA----AAGVNKKIKVFECDAIINENRDIHYPV---VEM-ASRSKLSSICWNSYIKSQIASSNF 677 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~la----t~~~d~~i~iwd~~~~~~~~~~~~~~~---~~~-~~~~~i~~v~~~~~~~~~laS~s~ 677 (720)
+...|++|+|+|||++|| ||+.|++|+|||+.+..........++ ..+ .|...|.+|+|+|+.+++|||++.
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 367899999999999999 899999999999865421111110122 222 246789999999987789999999
Q ss_pred CCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 678 EGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 678 D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
||+|+|||+++++.+.. |+|++|+|.+..+++|+.|..
T Consensus 171 Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~ 215 (434)
T 2oit_A 171 DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGT 215 (434)
T ss_dssp TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSC
T ss_pred CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCc
Confidence 99999999999977643 899999999999999998743
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.34 E-value=6.4e-12 Score=136.80 Aligned_cols=120 Identities=12% Similarity=0.089 Sum_probs=95.3
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEE
Q 004998 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLS 660 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~ 660 (720)
+..++|...+.+.+..+ .+|.+.|.+++|+|||++||||+.|++|+|||+.+.. ++..+ .|...|.
T Consensus 119 g~i~iwd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~--------~~~~~~~h~~~v~ 185 (420)
T 3vl1_A 119 GDIKVLDSNFNLQREID-----QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS--------NPRTLIGHRATVT 185 (420)
T ss_dssp SCEEEECTTSCEEEEET-----TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------CCEEEECCSSCEE
T ss_pred CCEEEEeCCCcceeeec-----ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc--------CceEEcCCCCcEE
Confidence 34455555555555544 3568999999999999999999999999999987652 33333 4678899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEEE----------E---------------------EEeecCCceEEEe
Q 004998 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSAL----------Y---------------------CIVLNKLLIIFRY 709 (720)
Q Consensus 661 ~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~v----------~---------------------~v~~~~~~~~~~~ 709 (720)
+++|+|+ +.+|||++.||+|+|||+++++++.++ . +++|++.+..+..
T Consensus 186 ~~~~~~~-~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 264 (420)
T 3vl1_A 186 DIAIIDR-GRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIA 264 (420)
T ss_dssp EEEEETT-TTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEE
T ss_pred EEEEcCC-CCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEE
Confidence 9999996 569999999999999999999988763 2 3567889999999
Q ss_pred cCccce
Q 004998 710 GMFQEV 715 (720)
Q Consensus 710 ~~~~~~ 715 (720)
|+-|..
T Consensus 265 ~~~dg~ 270 (420)
T 3vl1_A 265 GHVSGV 270 (420)
T ss_dssp EETTSC
T ss_pred EcCCCe
Confidence 887753
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.34 E-value=9.6e-12 Score=134.12 Aligned_cols=114 Identities=11% Similarity=0.133 Sum_probs=92.6
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEE---ecCCCCEEEEEEe
Q 004998 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVE---MASRSKLSSICWN 665 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~i~~v~~~ 665 (720)
..+++...+ .+|...|.+++|+|+| ++||+|+.|++|+|||+.+.. .... ..|...|.+++|+
T Consensus 61 ~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--------~~~~~~~~~h~~~v~~~~~~ 127 (383)
T 3ei3_B 61 KSYKLHRTA-----SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQN--------KTSFIQGMGPGDAITGMKFN 127 (383)
T ss_dssp TTCEEEEEE-----CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTT--------CEEEECCCSTTCBEEEEEEE
T ss_pred cccceEEec-----cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcc--------cceeeecCCcCCceeEEEeC
Confidence 445566655 4458999999999999 999999999999999987652 1222 2467899999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCcEEEE----------EEEEeecCCceEEEecCccceEE
Q 004998 666 SYIKSQIASSNFEGVVQVGQVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 666 ~~~~~~laS~s~D~~v~lWDv~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|+++++||+++.|++|+|||+.++ .+.. |++++|++.+..+++|+.|...+
T Consensus 128 ~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 188 (383)
T 3ei3_B 128 QFNTNQLFVSSIRGATTLRDFSGS-VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLL 188 (383)
T ss_dssp TTEEEEEEEEETTTEEEEEETTSC-EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEE
T ss_pred CCCCCEEEEEeCCCEEEEEECCCC-ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEE
Confidence 976789999999999999999964 4432 89999999999999998875443
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.32 E-value=5.7e-12 Score=136.67 Aligned_cols=128 Identities=10% Similarity=0.087 Sum_probs=106.9
Q ss_pred hhhhhccccceEEeeeec-cCCCCCCCCCeEEEEECCCC-CEEEEeeCCC---cEEEeeCCcccccccccccceEEec--
Q 004998 582 GLCKYLSFSKLRVKADLN-QGDLLNSSNLVCSLSFDRDG-ELFAAAGVNK---KIKVFECDAIINENRDIHYPVVEMA-- 654 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~-~~~~~~~~~~V~sv~f~~dg-~~lat~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~-- 654 (720)
+..+++...+.+.+..+. ++...+|...|.+++|+|+| .+||+|+.|+ +|+|||+++.. .++..+.
T Consensus 188 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~-------~~~~~~~~~ 260 (416)
T 2pm9_A 188 NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN-------TPLQTLNQG 260 (416)
T ss_dssp SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT-------SCSBCCCSC
T ss_pred CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC-------CCcEEeecC
Confidence 345667777778888887 56667778999999999998 6899999999 99999987642 2333443
Q ss_pred CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCc-eEEEecCccceE
Q 004998 655 SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLL-IIFRYGMFQEVK 716 (720)
Q Consensus 655 ~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~-~~~~~~~~~~~~ 716 (720)
|...|.+++|+|.++.+||+++.||+|+|||+.+++++.+ |++++|+|.+ ..+++++.|..-
T Consensus 261 ~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i 330 (416)
T 2pm9_A 261 HQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKI 330 (416)
T ss_dssp CSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEE
T ss_pred ccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcE
Confidence 5778999999996678999999999999999999999886 7899999999 899999998654
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.32 E-value=7.5e-12 Score=141.17 Aligned_cols=100 Identities=15% Similarity=0.135 Sum_probs=80.1
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCC-----CCEEEEEEecCCCCEEEEEeCCC
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR-----SKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-----~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
.|...|.+|+|+|||++||++|.|++|+|||.... +..+.|+ ..|.+|+|||+ +++||+|+.||
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~~----------l~~l~~~~~~~~~sv~svafSPD-G~~LAsgs~DG 151 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNKM----------LTNLDSKGNLSSRTYHCFEWNPI-ESSIVVGNEDG 151 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTEE----------EEECCCSSCSTTTCEEEEEECSS-SSCEEEEETTS
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCce----------eeeccCCCccccccEEEEEEcCC-CCEEEEEcCCC
Confidence 34788999999999999999999999999995442 1222222 25999999996 56999999999
Q ss_pred cEEEEECCCCcE-------EE-----------EEEEEeecCCceEEEecCccceEE
Q 004998 680 VVQVGQVLHLIY-------FS-----------ALYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 680 ~v~lWDv~tg~~-------~~-----------~v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+|+|||+.++.. +. .|++|+|+|.+ ++.++.|..-+
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVr 205 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVF 205 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEE
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEE
Confidence 999999999852 22 39999999999 66777777554
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.32 E-value=6e-12 Score=147.71 Aligned_cols=125 Identities=14% Similarity=0.147 Sum_probs=98.0
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceE--EecCCCC
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV--EMASRSK 658 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~--~~~~~~~ 658 (720)
++..++|...+.+.+..+ .+|...|.+|+|+|||.+|||||.|++|+|||....... .+. ...|...
T Consensus 451 Dg~v~vwd~~~~~~~~~~-----~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~------~~~~~~~~h~~~ 519 (694)
T 3dm0_A 451 DGELRLWDLAAGVSTRRF-----VGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKY------TISEGGEGHRDW 519 (694)
T ss_dssp TSEEEEEETTTTEEEEEE-----ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE------EECSSTTSCSSC
T ss_pred CCcEEEEECCCCcceeEE-----eCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcce------eeccCCCCCCCc
Confidence 445556665555555544 456899999999999999999999999999997543100 000 0134677
Q ss_pred EEEEEEecCC-CCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 659 LSSICWNSYI-KSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 659 i~~v~~~~~~-~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+|++|+|+. ...|+|++.|++|+|||+++++++.+ |++++|+|.+..+++|+.|..-
T Consensus 520 v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i 585 (694)
T 3dm0_A 520 VSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVV 585 (694)
T ss_dssp EEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBC
T ss_pred EEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeE
Confidence 9999999975 35899999999999999999998876 8999999999999999988643
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.31 E-value=7.6e-12 Score=151.54 Aligned_cols=101 Identities=16% Similarity=0.166 Sum_probs=88.1
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lW 684 (720)
+|.+.|.+|+|+|||++||+|+.|++|+|||.... ..+....+...|.+|+|+| + .+|||++.|++|+||
T Consensus 15 gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~--------~~~~~~~~~~~V~~l~fsp-g-~~L~S~s~D~~v~lW 84 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQV--------EVVIKLEDRSAIKEMRFVK-G-IYLVVINAKDTVYVL 84 (902)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTC--------EEEEECSSCCCEEEEEEET-T-TEEEEEETTCEEEEE
T ss_pred CCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCc--------EEEEEcCCCCCEEEEEEcC-C-CEEEEEECcCeEEEE
Confidence 56899999999999999999999999999997654 1233345677899999999 4 499999999999999
Q ss_pred ECCCCcEEEE------EEEEeecCCceEEEecCccce
Q 004998 685 QVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 685 Dv~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|+.+++++.+ |+|++|+|.+..+.+|+-|..
T Consensus 85 d~~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~ 121 (902)
T 2oaj_A 85 SLYSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGS 121 (902)
T ss_dssp ETTTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSC
T ss_pred ECCCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCc
Confidence 9999998876 899999999999999987754
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.30 E-value=5.4e-12 Score=135.49 Aligned_cols=108 Identities=7% Similarity=0.079 Sum_probs=81.2
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
.+.+|.+.|.+++|+|||++|||||.|++|+|||+.+.. .. .++.. ..|...|.+++|+|+ +++||+++.|++
T Consensus 50 ~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~----~~-~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~ 123 (377)
T 3dwl_C 50 TFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG----TW-KQTLVLLRLNRAATFVRWSPN-EDKFAVGSGARV 123 (377)
T ss_dssp CBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC----------CC-CCEEECCCCSSCEEEEECCTT-SSCCEEEESSSC
T ss_pred EEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC----ce-eeeeEecccCCceEEEEECCC-CCEEEEEecCCe
Confidence 345679999999999999999999999999999987652 00 12333 345788999999995 569999999999
Q ss_pred EEEEECCCCcE---EEE--------EEEEeecCCceEEEecCccce
Q 004998 681 VQVGQVLHLIY---FSA--------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 681 v~lWDv~tg~~---~~~--------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|+|||+.+++. +.. |++++|+|.+..+++|+.|..
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~ 169 (377)
T 3dwl_C 124 ISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRK 169 (377)
T ss_dssp EEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSC
T ss_pred EEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCE
Confidence 99999998863 332 899999999999999998854
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.2e-11 Score=149.87 Aligned_cols=111 Identities=14% Similarity=0.082 Sum_probs=88.5
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccc-------c---------------cccc---------------c
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN-------E---------------NRDI---------------H 647 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~-------~---------------~~~~---------------~ 647 (720)
+|...|.+|+|+|||++||+|+.|++|+|||+.+... . ..+. -
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 565 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF 565 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence 7889999999999999999999999999999875410 0 0000 0
Q ss_pred cceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------------EEEEeec-----CC---ce
Q 004998 648 YPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------------LYCIVLN-----KL---LI 705 (720)
Q Consensus 648 ~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------------v~~v~~~-----~~---~~ 705 (720)
.|+..+. |.+.|++|+|+|++ +||+|+.|++|+|||++++..+.. |+||+|+ ++ +.
T Consensus 566 ~~~~~l~~h~~~V~svafSpdG--~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~ 643 (902)
T 2oaj_A 566 MPSTAVHANKGKTSAINNSNIG--FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSI 643 (902)
T ss_dssp EEEEEECCCSCSEEEEEECBTS--EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEE
T ss_pred ceeEEEEcCCCcEEEEEecCCc--EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcce
Confidence 1344443 68899999999964 999999999999999998876531 9999999 77 48
Q ss_pred EEEecCccceEE
Q 004998 706 IFRYGMFQEVKY 717 (720)
Q Consensus 706 ~~~~~~~~~~~~ 717 (720)
.+++|+.|..-+
T Consensus 644 ~l~sgs~D~tv~ 655 (902)
T 2oaj_A 644 LMVCGTDMGEVI 655 (902)
T ss_dssp EEEEEETTSEEE
T ss_pred EEEEEecCCcEE
Confidence 999999886543
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.30 E-value=5.1e-12 Score=133.48 Aligned_cols=109 Identities=15% Similarity=0.110 Sum_probs=86.5
Q ss_pred CCCCCCCeEEEEECCC-----------------CCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEE
Q 004998 603 LLNSSNLVCSLSFDRD-----------------GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICW 664 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d-----------------g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~ 664 (720)
+.+|...|.+++|+|+ +++|||||.|++|+|||+..... ..++..+ .|...|.+|+|
T Consensus 146 ~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~-----~~~~~~l~~h~~~V~~v~~ 220 (316)
T 3bg1_A 146 NNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQ-----WKEEQKLEAHSDWVRDVAW 220 (316)
T ss_dssp TTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSC-----EEEEECCBCCSSCEEEEEC
T ss_pred eccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCc-----cceeeecccCCCceEEEEe
Confidence 4567889999999998 47999999999999999854210 0123333 35778999999
Q ss_pred ecCC---CCEEEEEeCCCcEEEEECCCC-------cEEEE----EEEEeecCCceEEEecCccceE
Q 004998 665 NSYI---KSQIASSNFEGVVQVGQVLHL-------IYFSA----LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 665 ~~~~---~~~laS~s~D~~v~lWDv~tg-------~~~~~----v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+|++ ..+|||++.||+|+|||+.++ +.+.. |++++|+|.+..+++|+.|..-
T Consensus 221 sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v 286 (316)
T 3bg1_A 221 APSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKV 286 (316)
T ss_dssp CCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCE
T ss_pred cCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeE
Confidence 9975 369999999999999999862 23433 9999999999999999988644
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.29 E-value=3.5e-12 Score=145.08 Aligned_cols=105 Identities=11% Similarity=0.108 Sum_probs=85.2
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEE--EEecCCCCEEEEEeCC
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSI--CWNSYIKSQIASSNFE 678 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v--~~~~~~~~~laS~s~D 678 (720)
.+.+|...|.||+|++++ +||||+.|++|+|||+++.. .|+..+ .|...|.+| +|+|++.++|||||.|
T Consensus 261 ~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~-------~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D 332 (524)
T 2j04_B 261 TLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPE-------VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVD 332 (524)
T ss_dssp EECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCS-------SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETT
T ss_pred EEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCC-------CceEEeecccccEEEEEEEcCCCCCeEEEEeccC
Confidence 356788999999999865 89999999999999987641 344433 467889999 4666543799999999
Q ss_pred CcEEEEECCCCcEEEE---------EEEEeecCCceEEEecCccc
Q 004998 679 GVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 679 ~~v~lWDv~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~ 714 (720)
++|||||+++++++.+ |++|+|+|.+..+++|+.|.
T Consensus 333 ~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~ 377 (524)
T 2j04_B 333 GYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGAS 377 (524)
T ss_dssp SEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSS
T ss_pred CeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCC
Confidence 9999999998875432 57899999998899888875
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.29 E-value=5.5e-12 Score=135.42 Aligned_cols=111 Identities=13% Similarity=0.098 Sum_probs=88.5
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccccc----------ccccceEEecCCCCEEEEEEecCCCCEEEEE
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR----------DIHYPVVEMASRSKLSSICWNSYIKSQIASS 675 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~----------~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~ 675 (720)
|...|.+++|+|||++||+|+.|++|+|||+.+...... ....++..+.|...|.+++|+|+ +.+||++
T Consensus 145 h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-~~~l~~~ 223 (377)
T 3dwl_C 145 LRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPS-GNALAYA 223 (377)
T ss_dssp CCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTT-SSCEEEE
T ss_pred cCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCC-CCEEEEE
Confidence 789999999999999999999999999999864211000 01123344466788999999996 4699999
Q ss_pred eCCCcEEEEECCCCcE----EEE-------EEEEeecCCceEEEecCccceEE
Q 004998 676 NFEGVVQVGQVLHLIY----FSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 676 s~D~~v~lWDv~tg~~----~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+.||+|+|||+.++++ +.+ |++++|++.+.++.+|+-+.+..
T Consensus 224 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~ 276 (377)
T 3dwl_C 224 GHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPIL 276 (377)
T ss_dssp ETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEE
T ss_pred eCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEE
Confidence 9999999999999987 433 89999999999999998777653
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.28 E-value=2.5e-11 Score=130.88 Aligned_cols=104 Identities=10% Similarity=0.118 Sum_probs=88.5
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
+|...|.+++|+|++++||+|+.|++|+|||++. .++..+ .|...|.+|+|+|++..+|||++.|++|+|
T Consensus 161 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~---------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 231 (383)
T 3ei3_B 161 SWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG---------HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKL 231 (383)
T ss_dssp CSSCCEEEEEEETTTTEEEEEETTSEEEEEETTS---------CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred CCCCCeEEEEECCCCCEEEEECCCCCEEEEECCC---------CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEE
Confidence 4568899999999999999999999999999842 244444 457889999999976669999999999999
Q ss_pred EECCC----CcEEEE------EEEEeecC-CceEEEecCccceEE
Q 004998 684 GQVLH----LIYFSA------LYCIVLNK-LLIIFRYGMFQEVKY 717 (720)
Q Consensus 684 WDv~t----g~~~~~------v~~v~~~~-~~~~~~~~~~~~~~~ 717 (720)
||+++ +.++.. |++++|+| .+..+++|+.|..-+
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~ 276 (383)
T 3ei3_B 232 WDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIR 276 (383)
T ss_dssp EEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEE
T ss_pred EeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEE
Confidence 99998 667664 89999999 999999999885443
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.28 E-value=3.2e-11 Score=131.41 Aligned_cols=105 Identities=12% Similarity=0.273 Sum_probs=90.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEe--CCC
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSN--FEG 679 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s--~D~ 679 (720)
+.+|.+.|.+++|+|||.+||+|+.|++|+|||+.+. .++..+ .+...|.+++|+|++..+|++++ .|+
T Consensus 213 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~--------~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~ 284 (401)
T 4aez_A 213 LQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSS--------IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDK 284 (401)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCS--------SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTC
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCC--------CccEEecCCcceEEEEEECCCCCCEEEEecCCCCC
Confidence 4457899999999999999999999999999998765 244444 45788999999998888999976 899
Q ss_pred cEEEEECCCCcEEEE------EEEEeecCCceEEEe--cCccce
Q 004998 680 VVQVGQVLHLIYFSA------LYCIVLNKLLIIFRY--GMFQEV 715 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~--~~~~~~ 715 (720)
+|++||+.+++++.+ +.+++|++.+..+.. |.-|-.
T Consensus 285 ~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~ 328 (401)
T 4aez_A 285 QIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNN 328 (401)
T ss_dssp EEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCE
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCc
Confidence 999999999999876 899999999999988 655543
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.27 E-value=2.9e-11 Score=130.22 Aligned_cols=112 Identities=13% Similarity=0.190 Sum_probs=86.7
Q ss_pred CCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe------cCCCCEEEEEEecCCCCEEEEE
Q 004998 603 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM------ASRSKLSSICWNSYIKSQIASS 675 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~------~~~~~i~~v~~~~~~~~~laS~ 675 (720)
+.+|.+.|.+++|+| +|++||||+.|++|+|||+.+..........+.... .|...|.+++|+|+++++|+|+
T Consensus 39 ~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 39 ERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSS 118 (408)
T ss_dssp CCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEE
T ss_pred eeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEE
Confidence 345799999999999 999999999999999999887522111000000111 2677899999999777899999
Q ss_pred eCCCcEEEEECCCCcEEEE------EEEEeecCCce---EEEecCccc
Q 004998 676 NFEGVVQVGQVLHLIYFSA------LYCIVLNKLLI---IFRYGMFQE 714 (720)
Q Consensus 676 s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~---~~~~~~~~~ 714 (720)
+.||+|++||+.+++.+.. +.++.|++... .+..|..|.
T Consensus 119 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (408)
T 4a11_B 119 SFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGP 166 (408)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSS
T ss_pred eCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCC
Confidence 9999999999999998876 77888888544 777776654
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.1e-11 Score=132.23 Aligned_cols=120 Identities=9% Similarity=-0.050 Sum_probs=89.4
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-c-CCC
Q 004998 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-A-SRS 657 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~-~~~ 657 (720)
.++..++|...+.+.+.... .+|...|.+++|+|||.+||+|+.|++|+|||+++... ....+ . |.+
T Consensus 147 ~dg~i~~wd~~~~~~~~~~~----~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~-------~~~~~~~~h~~ 215 (343)
T 3lrv_A 147 NRGTIGFQSYEDDSQYIVHS----AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQ-------ASSRFPVDEEA 215 (343)
T ss_dssp TTCCEEEEESSSSCEEEEEC----CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTS-------CCEECCCCTTS
T ss_pred CCCcEEEEECCCCcEEEEEe----cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCC-------CccEEeccCCC
Confidence 34445566655555544332 12355799999999999999999999999999987621 11222 2 578
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------EE--EEeecCCceEEEecCc
Q 004998 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA----------LY--CIVLNKLLIIFRYGMF 712 (720)
Q Consensus 658 ~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~----------v~--~v~~~~~~~~~~~~~~ 712 (720)
.|++|+|+|+ +.+|||++ |++|+|||+++++++.+ +. +++|+|.+.+++.|+-
T Consensus 216 ~v~~l~fs~~-g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 216 KIKEVKFADN-GYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp CEEEEEECTT-SSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred CEEEEEEeCC-CCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC
Confidence 9999999996 56999999 56999999999876532 33 6999999999999654
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.26 E-value=7.8e-12 Score=138.11 Aligned_cols=102 Identities=8% Similarity=0.064 Sum_probs=85.7
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lW 684 (720)
+...|++++|+|||.+||+|+.|++|+|||+... ++.. ..|...|.+|+|+|++..+||+|+.|++|+||
T Consensus 208 ~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~---------~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iw 278 (435)
T 4e54_B 208 INIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK---------ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIW 278 (435)
T ss_dssp CSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC---------BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEE
T ss_pred CCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc---------eeEEEecccceEEeeeecCCCceEEEEecCcceeeEE
Confidence 3567899999999999999999999999997643 1212 23577899999999888899999999999999
Q ss_pred ECCCCcEEEE----------EEEEeecCCceEEEecCccceE
Q 004998 685 QVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 685 Dv~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+++++.... |++++|+|.+..+++|+.|..-
T Consensus 279 d~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i 320 (435)
T 4e54_B 279 DLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEI 320 (435)
T ss_dssp ETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCE
T ss_pred ecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEE
Confidence 9988764322 8999999999999999988643
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.26 E-value=3e-11 Score=143.35 Aligned_cols=104 Identities=10% Similarity=0.020 Sum_probs=90.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|++.|.+++|+|||.+||+|+.|++|+|||+.++ ..+..+ .|.+.|.+++|+|+ +++||+++.||+|
T Consensus 9 ~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~--------~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i 79 (814)
T 3mkq_A 9 FSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ--------VEVRSIQVTETPVRAGKFIAR-KNWIIVGSDDFRI 79 (814)
T ss_dssp EEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT--------EEEEEEECCSSCEEEEEEEGG-GTEEEEEETTSEE
T ss_pred eecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCC--------ceEEEEecCCCcEEEEEEeCC-CCEEEEEeCCCeE
Confidence 3456899999999999999999999999999998775 234444 35788999999995 5699999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|||+.+|+.+.+ |++++|+|.+..+.+|+-|..
T Consensus 80 ~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 120 (814)
T 3mkq_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLT 120 (814)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSE
T ss_pred EEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCE
Confidence 9999999998876 899999999999999988754
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.25 E-value=2.5e-11 Score=129.36 Aligned_cols=104 Identities=13% Similarity=0.157 Sum_probs=87.2
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~lW 684 (720)
|.+.|.+++|+|||++||+|+.|++|+|||+.+... .++..+ .|...|.+++|+|+ +++||+++.||+|+||
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~------~~~~~~~~h~~~v~~~~~~~~-~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW------VQVHELKEHNGQVTGVDWAPD-SNRIVTCGTDRNAYVW 79 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEE------EEEEEEECCSSCEEEEEEETT-TTEEEEEETTSCEEEE
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcE------EeeeeecCCCCcccEEEEeCC-CCEEEEEcCCCeEEEE
Confidence 688999999999999999999999999999765410 133444 45788999999995 5799999999999999
Q ss_pred ECCCCcEEEE---------EEEEeecCCceEEEecCccceE
Q 004998 685 QVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 685 Dv~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+.+++.... |++++|++.+..+++|+.|..-
T Consensus 80 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v 120 (372)
T 1k8k_C 80 TLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVI 120 (372)
T ss_dssp EEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSE
T ss_pred ECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEE
Confidence 9999975443 8999999999999999877543
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.25 E-value=3.9e-11 Score=130.60 Aligned_cols=103 Identities=17% Similarity=0.170 Sum_probs=87.9
Q ss_pred CCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEe---cCCCCEEEEEEecCCCCEEEEEeCC
Q 004998 603 LLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~i~~v~~~~~~~~~laS~s~D 678 (720)
+.+|...|.+|+|+|+| .+||||+.|++|+|||+.+. .++..+ .|...|.+++|+|+ +++||+++.|
T Consensus 127 ~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d 197 (402)
T 2aq5_A 127 LEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTG--------AAVLTLGPDVHPDTIYSVDWSRD-GALICTSCRD 197 (402)
T ss_dssp EECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTT--------EEEEEECTTTCCSCEEEEEECTT-SSCEEEEETT
T ss_pred ecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCC--------CccEEEecCCCCCceEEEEECCC-CCEEEEEecC
Confidence 45678999999999999 69999999999999998775 244444 35778999999995 5699999999
Q ss_pred CcEEEEECCCCcEEEE---------EEEEeecCCceEEEec---Cccc
Q 004998 679 GVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYG---MFQE 714 (720)
Q Consensus 679 ~~v~lWDv~tg~~~~~---------v~~v~~~~~~~~~~~~---~~~~ 714 (720)
|+|+|||+++++.+.+ +.+++|++.+.++..| +-|.
T Consensus 198 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~ 245 (402)
T 2aq5_A 198 KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSER 245 (402)
T ss_dssp SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCE
T ss_pred CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCc
Confidence 9999999999998876 4789999999999988 5554
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.25 E-value=3.6e-11 Score=137.29 Aligned_cols=107 Identities=12% Similarity=0.061 Sum_probs=90.8
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec--CCCCEEEEEEecC---------CCC
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA--SRSKLSSICWNSY---------IKS 670 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~i~~v~~~~~---------~~~ 670 (720)
.+.+|...|.+++|+|||++||+|+.|++|+|||+.+.. ++..+. |...|++++|+|. ++.
T Consensus 483 ~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~--------~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~ 554 (615)
T 1pgu_A 483 LKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSRE--------VKTSRWAFRTSKINAISWKPAEKGANEEEIEED 554 (615)
T ss_dssp CSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------EEECCSCCCSSCEEEEEECCCC------CCSCC
T ss_pred ccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCc--------ceeEeecCCCCceeEEEEcCccccccccccCCC
Confidence 355678999999999999999999999999999997762 333333 6788999999992 356
Q ss_pred EEEEEeCCCcEEEEECCCC-cEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 671 QIASSNFEGVVQVGQVLHL-IYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 671 ~laS~s~D~~v~lWDv~tg-~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+||+++.||+|+|||+.++ +++.. |++++|++.+. +++++.|..-+
T Consensus 555 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~ 608 (615)
T 1pgu_A 555 LVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIK 608 (615)
T ss_dssp EEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEE
T ss_pred EEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEE
Confidence 9999999999999999998 67765 99999999999 99998886443
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.24 E-value=2.1e-11 Score=132.71 Aligned_cols=99 Identities=10% Similarity=-0.043 Sum_probs=85.8
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004998 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv 686 (720)
.++....|+|||++||+|+.|++|+|||+.+. .++..+ .|...|++++|+|+ +.+|||++.|++|+|||+
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~d~~i~iwd~ 168 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN--------LQREIDQAHVSEITKLKFFPS-GEALISSSQDMQLKIWSV 168 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSC--------EEEEETTSSSSCEEEEEECTT-SSEEEEEETTSEEEEEET
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCc--------ceeeecccccCccEEEEECCC-CCEEEEEeCCCeEEEEeC
Confidence 66777789999999999999999999998765 233443 46788999999996 569999999999999999
Q ss_pred CCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 687 LHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 687 ~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+++++.+ |++++|+|.+..+++|+.|..
T Consensus 169 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~ 204 (420)
T 3vl1_A 169 KDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGT 204 (420)
T ss_dssp TTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred CCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCc
Confidence 99988765 899999999999999998864
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=3.2e-12 Score=131.80 Aligned_cols=95 Identities=14% Similarity=0.091 Sum_probs=74.9
Q ss_pred eeehhhhcccCCCCCc--eecccceeecCCCCCcEEEEEecCC--C----CHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Q 004998 64 KHSDGVELTHGDHLRN--QGGLSGVCENEAAIDPFVHAIEWGD--V----SLRQWLDKPKRSVDVYECLHIFRQIVEIVY 135 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnI--V~l~~~~~~~~~~~~~~~lv~E~~g--g----sL~~~L~~~~~~l~~~~~~~i~~QIl~aL~ 135 (720)
..+|..+|.++.|++| ..+++ .. ..++||||.| | +|.+++.. .++.++..++.||+.||.
T Consensus 117 ~~~E~~~l~~l~~~~i~~p~~~~----~~----~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~ 184 (258)
T 1zth_A 117 TEKEFRNLERAKEAGVSVPQPYT----YM----KNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVK 184 (258)
T ss_dssp HHHHHHHHHHHHHTTCCCCCEEE----EE----TTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCeEEE----cC----CCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHH
Confidence 4478888988888865 33333 11 3489999953 3 88887632 235578899999999999
Q ss_pred HHH-HcCceeccCCCCcEEEccCCceEEeccCcccCCC
Q 004998 136 AAH-SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 172 (720)
Q Consensus 136 yLH-s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g 172 (720)
||| +.|||||||||+|||++. .++|+|||++....
T Consensus 185 ~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 185 RLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp HHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred HHHHHCCEEeCCCCHHHEEEcC--cEEEEECcccccCC
Confidence 999 999999999999999988 99999999996543
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.23 E-value=5.1e-11 Score=124.45 Aligned_cols=113 Identities=16% Similarity=0.194 Sum_probs=88.0
Q ss_pred CCCCCCeEEEEECCC--CCEEEEeeCCCcEEEeeCCccccccc-------------------------------------
Q 004998 604 LNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENR------------------------------------- 644 (720)
Q Consensus 604 ~~~~~~V~sv~f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~------------------------------------- 644 (720)
.+|...|.+++|+|+ +.+||+|+.|++|+|||+.+......
T Consensus 107 ~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~ 186 (351)
T 3f3f_A 107 NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLA 186 (351)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEE
T ss_pred cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEE
Confidence 356899999999999 99999999999999999875311000
Q ss_pred --------------ccc-cceEEe-cCCCCEEEEEEecCCC---CEEEEEeCCCcEEEEECCCC----------------
Q 004998 645 --------------DIH-YPVVEM-ASRSKLSSICWNSYIK---SQIASSNFEGVVQVGQVLHL---------------- 689 (720)
Q Consensus 645 --------------~~~-~~~~~~-~~~~~i~~v~~~~~~~---~~laS~s~D~~v~lWDv~tg---------------- 689 (720)
... .++..+ .|...|++++|+|++. ++|||++.||+|+|||++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 266 (351)
T 3f3f_A 187 VSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMF 266 (351)
T ss_dssp EEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------
T ss_pred EecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceecc
Confidence 000 013333 3577899999999753 69999999999999999876
Q ss_pred ------------------------------cEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 690 ------------------------------IYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 690 ------------------------------~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+.+.+ |++++|+|.+..+++|+.|..-
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v 330 (351)
T 3f3f_A 267 DNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKV 330 (351)
T ss_dssp ------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCE
T ss_pred CCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcE
Confidence 44443 8999999999999999988643
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.23 E-value=2.4e-11 Score=144.21 Aligned_cols=108 Identities=13% Similarity=0.142 Sum_probs=87.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCC-CCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYI-KSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~-~~~laS~s~D~~ 680 (720)
+.+|.+.|++++|+|||++|||||.|++|+|||+..... .++..+ .|.+.|++|+|+|+. +++||||+.||+
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~------~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~ 78 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH------KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEE------EEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSC
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCC------ccceeccCCcCceEEEEecCCCCCCEEEEEeCCCe
Confidence 467899999999999999999999999999999763211 233344 457889999999852 679999999999
Q ss_pred EEEEECCCCc--EEEE-------EEEEeecCC--ceEEEecCccceE
Q 004998 681 VQVGQVLHLI--YFSA-------LYCIVLNKL--LIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWDv~tg~--~~~~-------v~~v~~~~~--~~~~~~~~~~~~~ 716 (720)
|+|||+.+++ .+.. |+|++|+|. +..+.+|+.|..-
T Consensus 79 I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I 125 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKV 125 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE
T ss_pred EEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcE
Confidence 9999999997 4443 899999999 9999999887643
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.23 E-value=4.8e-11 Score=130.81 Aligned_cols=112 Identities=9% Similarity=0.054 Sum_probs=86.6
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccc-cceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIH-YPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+++|+|||++||+| .|++|+|||+.+......... .|.....|...|++++|+|++.++||+|+.||+|
T Consensus 173 ~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 173 ANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp CSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE
Confidence 35789999999999999999998 799999999874311000000 0111224577899999999765899999999999
Q ss_pred EEEECCCCcE----EE-------------------EEEEEeecCCceEEEecCccce
Q 004998 682 QVGQVLHLIY----FS-------------------ALYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWDv~tg~~----~~-------------------~v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|||+++++. +. .|.+++|+|.+.++++|+...+
T Consensus 252 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v 308 (447)
T 3dw8_B 252 RLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSV 308 (447)
T ss_dssp EEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEE
T ss_pred EEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeE
Confidence 9999999875 22 4889999999999998877333
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.22 E-value=6.6e-12 Score=137.07 Aligned_cols=110 Identities=7% Similarity=-0.149 Sum_probs=78.7
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecC-------CCCEEEEEe
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSY-------IKSQIASSN 676 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~-------~~~~laS~s 676 (720)
+|...+....+++++.+||+||.|++|||||..+.... ...++..+ .|.+.|++|+|+|. ++++|||||
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~---~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s 163 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETII---TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG 163 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEE---EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccc---eeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE
Confidence 45666777788889999999999999999997664110 00122223 35789999999982 457999999
Q ss_pred CCCcEEEEECCCCcEEEE-------EEEEeecCCc-eEEEecCccceEE
Q 004998 677 FEGVVQVGQVLHLIYFSA-------LYCIVLNKLL-IIFRYGMFQEVKY 717 (720)
Q Consensus 677 ~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~-~~~~~~~~~~~~~ 717 (720)
.|++|||||++++.++.. |.+|+|+|.+ ..+++|+.|..-.
T Consensus 164 ~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~ 212 (393)
T 4gq1_A 164 DDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIR 212 (393)
T ss_dssp TTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred CCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEE
Confidence 999999999998877665 8999999987 4899999886543
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.22 E-value=3.9e-11 Score=132.33 Aligned_cols=112 Identities=13% Similarity=0.143 Sum_probs=88.6
Q ss_pred CCCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 604 LNSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
.+|...|++|+|+|++. +||||+.|++|+|||+.+........ .+...+ .|...|.+|+|+|.++.+|||++.||+|
T Consensus 178 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i 256 (430)
T 2xyi_A 178 RGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVI-DAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKL 256 (430)
T ss_dssp ECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEE-ECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred cCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCcee-ccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeE
Confidence 45688999999999999 99999999999999997632111111 123333 5577899999999878899999999999
Q ss_pred EEEECCCC---cEEEE-------EEEEeecCCce-EEEecCccceE
Q 004998 682 QVGQVLHL---IYFSA-------LYCIVLNKLLI-IFRYGMFQEVK 716 (720)
Q Consensus 682 ~lWDv~tg---~~~~~-------v~~v~~~~~~~-~~~~~~~~~~~ 716 (720)
++||++++ +.+.. |.|++|+|.+. ++++|+.|..-
T Consensus 257 ~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v 302 (430)
T 2xyi_A 257 MIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTV 302 (430)
T ss_dssp EEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred EEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeE
Confidence 99999987 44443 89999999887 68888877543
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.22 E-value=1.2e-10 Score=121.78 Aligned_cols=119 Identities=9% Similarity=-0.014 Sum_probs=98.0
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEE
Q 004998 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v 662 (720)
..+++...+.+.+..+.+ ...|.+++|+|+|++||+|+.|++|++||+.+.. ......+...|.++
T Consensus 206 ~i~~~d~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~v~~~ 271 (337)
T 1gxr_A 206 TVRSWDLREGRQLQQHDF------TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD--------KYQLHLHESCVLSL 271 (337)
T ss_dssp EEEEEETTTTEEEEEEEC------SSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC--------EEEECCCSSCEEEE
T ss_pred cEEEEECCCCceEeeecC------CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC--------eEEEcCCccceeEE
Confidence 445566666666666654 6789999999999999999999999999987652 22334557889999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCccceE
Q 004998 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 663 ~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+|+|+ +.+|++++.||+|++||+.+++.+.. +++++|++.+..+.+|+-|..-
T Consensus 272 ~~~~~-~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 330 (337)
T 1gxr_A 272 KFAYC-GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKA 330 (337)
T ss_dssp EECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCE
T ss_pred EECCC-CCEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeE
Confidence 99996 56999999999999999999998765 8999999999999998877643
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=5.7e-11 Score=148.21 Aligned_cols=122 Identities=8% Similarity=0.041 Sum_probs=101.0
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCE
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i 659 (720)
++..+.|...+.+.+.+++ +|.+.|.+++|+|||++|||||.|++|+|||+.++ .++..+ .|...|
T Consensus 636 d~~i~vw~~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~--------~~~~~~~~~~~~v 702 (1249)
T 3sfz_A 636 DKTLQVFKAETGEKLLDIK-----AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATG--------KLVHTYDEHSEQV 702 (1249)
T ss_dssp TSCEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCE
T ss_pred CCeEEEEECCCCCEEEEec-----cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCC--------ceEEEEcCCCCcE
Confidence 3445556666666665554 56899999999999999999999999999998876 244444 457789
Q ss_pred EEEEEecC-CCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 660 SSICWNSY-IKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 660 ~~v~~~~~-~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+++|+|+ ...+|+|++.||+|++||+.+++++.+ |++++|+|.+..+++|+.|..
T Consensus 703 ~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~ 766 (1249)
T 3sfz_A 703 NCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGT 766 (1249)
T ss_dssp EEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSE
T ss_pred EEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCe
Confidence 99999996 345899999999999999999999876 899999999999999998754
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.22 E-value=4.1e-11 Score=131.56 Aligned_cols=120 Identities=15% Similarity=0.061 Sum_probs=90.5
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC
Q 004998 591 KLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~ 669 (720)
+.++++.+. .+|.+.|.+|+|+| ||++|||||.|++|+|||+.+..... ...+...+.|...|.+|+|+|+ +
T Consensus 51 ~g~~~~~~~----~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~--~~~~~~~~~h~~~v~~~~~~~~-~ 123 (437)
T 3gre_A 51 RGKLIATLM----ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGE--VYSSSLTYDCSSTVTQITMIPN-F 123 (437)
T ss_dssp CCCEEEEEC----TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTC--CCSCSEEEECSSCEEEEEECTT-S
T ss_pred cceEEeeec----cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCc--ccceeeeccCCCCEEEEEEeCC-C
Confidence 345666662 34789999999999 99999999999999999986621111 1123445567889999999994 5
Q ss_pred CEEEEEeCCCcEEEEECC---CCcEEEE-----EEEEeec----------------CCceEEEecCccceEE
Q 004998 670 SQIASSNFEGVVQVGQVL---HLIYFSA-----LYCIVLN----------------KLLIIFRYGMFQEVKY 717 (720)
Q Consensus 670 ~~laS~s~D~~v~lWDv~---tg~~~~~-----v~~v~~~----------------~~~~~~~~~~~~~~~~ 717 (720)
++||||+.||+|+|||+. +|+.+.. +.++.|+ +.+..+++|+.|..-+
T Consensus 124 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 195 (437)
T 3gre_A 124 DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVI 195 (437)
T ss_dssp SEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEE
T ss_pred CEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEE
Confidence 799999999999999994 7766653 5555544 5688888888876443
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.22 E-value=5.3e-11 Score=125.34 Aligned_cols=108 Identities=7% Similarity=0.031 Sum_probs=88.2
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCC-EEEEEeCCCcEE
Q 004998 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS-QIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~-~laS~s~D~~v~ 682 (720)
.+|.+.|.+++|+|||++||+|+.|++|+|||+.+.... ..+.....+...|.+++|+|+ ++ +|++++.||+|+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~ 82 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN----VDLLQSLRYKHPLLCCNFIDN-TDLQIYVGTVQGEIL 82 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE----EEEEEEEECSSCEEEEEEEES-SSEEEEEEETTSCEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc----ccceeeeecCCceEEEEECCC-CCcEEEEEcCCCeEE
Confidence 367899999999999999999999999999998665210 012334466889999999995 67 899999999999
Q ss_pred EEEC-CCCcEEE--------EEEEEeecCCceEEEecCccceEE
Q 004998 683 VGQV-LHLIYFS--------ALYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 683 lWDv-~tg~~~~--------~v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+||+ .+++... .|++++|++ +..+.+++.|..-+
T Consensus 83 ~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~ 125 (342)
T 1yfq_A 83 KVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIE 125 (342)
T ss_dssp EECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEE
T ss_pred EEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEE
Confidence 9999 8876532 178999999 99999999886543
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=7e-11 Score=147.39 Aligned_cols=103 Identities=17% Similarity=0.270 Sum_probs=89.1
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|.+.|.+++|+|||++|||||.|++|+|||+.+. .++..+ .|...|.+++|+|+ +.+|||++.||+|
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~--------~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~d~~v 681 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETG--------EKLLDIKAHEDEVLCCAFSSD-DSYIATCSADKKV 681 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC--------CEEEEECCCSSCEEEEEECTT-SSEEEEEETTSEE
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCC--------CEEEEeccCCCCEEEEEEecC-CCEEEEEeCCCeE
Confidence 4578999999999999999999999999999998776 234444 35788999999996 4699999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecC--CceEEEecCccc
Q 004998 682 QVGQVLHLIYFSA-------LYCIVLNK--LLIIFRYGMFQE 714 (720)
Q Consensus 682 ~lWDv~tg~~~~~-------v~~v~~~~--~~~~~~~~~~~~ 714 (720)
+|||+.+|+++.+ |+|++|++ ....+.+|+.|-
T Consensus 682 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~ 723 (1249)
T 3sfz_A 682 KIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDF 723 (1249)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTS
T ss_pred EEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCC
Confidence 9999999999886 89999999 556788887774
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.21 E-value=8.8e-11 Score=125.04 Aligned_cols=125 Identities=14% Similarity=0.059 Sum_probs=95.2
Q ss_pred hhhhhccccceE--EeeeeccCCCCCCCCCeEEEEECCC--CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC
Q 004998 582 GLCKYLSFSKLR--VKADLNQGDLLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS 657 (720)
Q Consensus 582 ~l~~~~~~~~~~--~~~~l~~~~~~~~~~~V~sv~f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 657 (720)
+..++|...+.+ .+..+ .+|...|.+++|+|+ |.+||+|+.|++|+|||+.+... ..+.....+..
T Consensus 79 g~v~iwd~~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-----~~~~~~~~~~~ 148 (379)
T 3jrp_A 79 GKVLIWKEENGRWSQIAVH-----AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-----TSPIIIDAHAI 148 (379)
T ss_dssp SCEEEEEEETTEEEEEEEE-----CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC-----CCEEEEECCTT
T ss_pred CEEEEEEcCCCceeEeeee-----cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc-----eeeEEecCCCC
Confidence 344555544433 33333 346889999999999 99999999999999999876521 11223335678
Q ss_pred CEEEEEEecC------------CCCEEEEEeCCCcEEEEECCCCcE----EEE-------EEEEeecCC---ceEEEecC
Q 004998 658 KLSSICWNSY------------IKSQIASSNFEGVVQVGQVLHLIY----FSA-------LYCIVLNKL---LIIFRYGM 711 (720)
Q Consensus 658 ~i~~v~~~~~------------~~~~laS~s~D~~v~lWDv~tg~~----~~~-------v~~v~~~~~---~~~~~~~~ 711 (720)
.|.+++|+|. ++.+||+++.||+|+|||+++++. +.+ |++++|+|. +..+++|+
T Consensus 149 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 149 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 8999999995 467999999999999999988753 222 889999999 89999999
Q ss_pred ccceE
Q 004998 712 FQEVK 716 (720)
Q Consensus 712 ~~~~~ 716 (720)
.|..-
T Consensus 229 ~dg~i 233 (379)
T 3jrp_A 229 QDRTC 233 (379)
T ss_dssp TTSCE
T ss_pred CCCEE
Confidence 88643
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.21 E-value=1.7e-10 Score=120.70 Aligned_cols=119 Identities=8% Similarity=0.052 Sum_probs=98.4
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEE
Q 004998 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v 662 (720)
...++...+.+++..++ +|...|.+++|+|+|.+|++|+.|++|++||+.+. .++..+.+...|.++
T Consensus 164 ~v~~~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~--------~~~~~~~~~~~v~~~ 230 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQ-----GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG--------RQLQQHDFTSQIFSL 230 (337)
T ss_dssp CEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEEE
T ss_pred cEEEEeCCCCceeeeee-----cccCceEEEEECCCCCEEEEEecCCcEEEEECCCC--------ceEeeecCCCceEEE
Confidence 34555555556666654 35789999999999999999999999999998775 245555667889999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCccce
Q 004998 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 663 ~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|+|+ +.+|++++.|+.|++||+.+++.... |.+++|++.+..+.+++.|..
T Consensus 231 ~~s~~-~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 288 (337)
T 1gxr_A 231 GYCPT-GEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNL 288 (337)
T ss_dssp EECTT-SSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EECCC-CCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCc
Confidence 99996 56999999999999999999887654 899999999999999987754
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.21 E-value=3.5e-11 Score=127.47 Aligned_cols=121 Identities=10% Similarity=0.145 Sum_probs=95.3
Q ss_pred hhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe----c
Q 004998 580 LEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM----A 654 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----~ 654 (720)
.++..++|...+.+.+..++ +|...|.+++|+| ++.+||+|+.|++|+|||+.+. .++..+ .
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~~~ 159 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYV-----GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTD--------TLVAIFGGVEG 159 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEE-----SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTT--------EEEEEECSTTS
T ss_pred CCCEEEEEEchhceEeeeec-----CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecC--------eEEEEeccccc
Confidence 34455666666667766665 4589999999999 9999999999999999998765 233333 4
Q ss_pred CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEE-----------------------------------EEEEEe
Q 004998 655 SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFS-----------------------------------ALYCIV 699 (720)
Q Consensus 655 ~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~-----------------------------------~v~~v~ 699 (720)
+...|.+++|+|+ +++|++++.||+|++||+++++.+. .|.|++
T Consensus 160 ~~~~v~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 238 (366)
T 3k26_A 160 HRDEVLSADYDLL-GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVR 238 (366)
T ss_dssp CSSCEEEEEECTT-SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEE
T ss_pred ccCceeEEEECCC-CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEE
Confidence 5788999999995 5699999999999999999886431 278899
Q ss_pred ecCCceEEEecCccceE
Q 004998 700 LNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 700 ~~~~~~~~~~~~~~~~~ 716 (720)
|+ +..+.+|+.|..-
T Consensus 239 ~~--~~~l~~~~~d~~i 253 (366)
T 3k26_A 239 WL--GDLILSKSCENAI 253 (366)
T ss_dssp EE--TTEEEEECSSSEE
T ss_pred Ec--CCEEEEEecCCEE
Confidence 98 6678888776543
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.21 E-value=3.6e-11 Score=127.07 Aligned_cols=126 Identities=16% Similarity=0.160 Sum_probs=93.9
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECC---CCCEEEEeeCCCcEEEeeCCcccccccccccce-EEecCCCC
Q 004998 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDR---DGELFAAAGVNKKIKVFECDAIINENRDIHYPV-VEMASRSK 658 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~---dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~~~~ 658 (720)
..+++...+.+.+.... |...|.+++|+| ++.+|++|+.|++|+|||+++..... ..+. ....+...
T Consensus 191 ~i~i~d~~~~~~~~~~~------~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~---~~~~~~~~~~~~~ 261 (357)
T 3i2n_A 191 DIKLFDLRNMALRWETN------IKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTK---GFASVSEKAHKST 261 (357)
T ss_dssp EEEEEETTTTEEEEEEE------CSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTT---EEEEEEEECCSSC
T ss_pred eEEEEECccCceeeecC------CCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccc---ceeeeccCCCcCC
Confidence 34455555555443333 378899999999 99999999999999999987642100 0111 11246788
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCc-------------------EEEE-------EEEEeecCCceEEE-ecC
Q 004998 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLI-------------------YFSA-------LYCIVLNKLLIIFR-YGM 711 (720)
Q Consensus 659 i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~-------------------~~~~-------v~~v~~~~~~~~~~-~~~ 711 (720)
|++++|+|++..+||+++.||+|+|||++++. ++.+ |++++|++.+..++ +|+
T Consensus 262 v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~ 341 (357)
T 3i2n_A 262 VWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSS 341 (357)
T ss_dssp EEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEE
T ss_pred EEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEec
Confidence 99999999765589999999999999998653 3333 89999999999998 899
Q ss_pred ccceEE
Q 004998 712 FQEVKY 717 (720)
Q Consensus 712 ~~~~~~ 717 (720)
.|..-+
T Consensus 342 ~d~~i~ 347 (357)
T 3i2n_A 342 FDQTVR 347 (357)
T ss_dssp TTSEEE
T ss_pred CCCcEE
Confidence 886544
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.20 E-value=1.2e-10 Score=127.71 Aligned_cols=123 Identities=12% Similarity=0.159 Sum_probs=98.6
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCE
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i 659 (720)
+.-.++|...+.+++..+. +.+|...|+||+|+|||++||+|+.|++|+|||+.+. .++..+ .|...|
T Consensus 124 d~tV~lWd~~tg~~~~~~~---~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~--------~~~~~~~~h~~~v 192 (420)
T 4gga_A 124 DNSVYLWSASSGDILQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--------KRLRNMTSHSARV 192 (420)
T ss_dssp TTEEEEEETTTCCEEEEEE---CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCE
T ss_pred CCEEEEEECCCCCEEEEEE---ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC--------cEEEEEeCCCCce
Confidence 4456777777766666654 3467889999999999999999999999999998876 234444 357789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEE-EE-------EEEEeecCCceEEEecCccceEE
Q 004998 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYF-SA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 660 ~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~-~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.+++|++ .+|+||+.|++|++||+.+.... .+ +.++.|++.+..+.++..|...+
T Consensus 193 ~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~ 255 (420)
T 4gga_A 193 GSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVN 255 (420)
T ss_dssp EEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEeeCC---CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccce
Confidence 9999986 58999999999999999876543 32 78999999999999998876543
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.20 E-value=1e-10 Score=128.98 Aligned_cols=107 Identities=10% Similarity=0.205 Sum_probs=87.0
Q ss_pred CCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
+.+|...|.+|+|+| ++.+||+|+.|++|+|||+++... ..++..+ .|...|++|+|+|++..+||+|+.||+
T Consensus 227 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~-----~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~ 301 (430)
T 2xyi_A 227 FTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT-----SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKT 301 (430)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS-----SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred ecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC-----CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCe
Confidence 446789999999999 678999999999999999886510 1234444 557889999999988779999999999
Q ss_pred EEEEECCC-CcEEEE-------EEEEeecCCce-EEEecCccc
Q 004998 681 VQVGQVLH-LIYFSA-------LYCIVLNKLLI-IFRYGMFQE 714 (720)
Q Consensus 681 v~lWDv~t-g~~~~~-------v~~v~~~~~~~-~~~~~~~~~ 714 (720)
|+|||+++ ++.+.+ |++++|+|.+. ++++|+.|-
T Consensus 302 v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~ 344 (430)
T 2xyi_A 302 VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDR 344 (430)
T ss_dssp EEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred EEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCC
Confidence 99999998 454544 89999999984 678877664
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.19 E-value=1.7e-10 Score=124.08 Aligned_cols=91 Identities=8% Similarity=-0.067 Sum_probs=66.8
Q ss_pred eeCCCcEEEeeCCcccccccc-------cccc-eEEe-cCCCCEEEEEEecCCCCEEEEEeCCCc-EEEEECCCCcEEEE
Q 004998 625 AGVNKKIKVFECDAIINENRD-------IHYP-VVEM-ASRSKLSSICWNSYIKSQIASSNFEGV-VQVGQVLHLIYFSA 694 (720)
Q Consensus 625 ~~~d~~i~iwd~~~~~~~~~~-------~~~~-~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~-v~lWDv~tg~~~~~ 694 (720)
|+.|++|+|||+.+....... .-.| +..+ .|.+.|++|+|+|+ +.+||||+.||+ |+|||+++|+++.+
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~-g~~l~s~s~d~~~v~iwd~~~~~~~~~ 233 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK-SDMVATCSQDGTIIRVFKTEDGVLVRE 233 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT-SSEEEEEETTCSEEEEEETTTCCEEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC-CCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 566777777776653100000 0013 4444 45788999999995 579999999999 99999999998765
Q ss_pred ---------EEEEeecCCceEEEecCccceE
Q 004998 695 ---------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 695 ---------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|++++|+|.+..+++|+.|..-
T Consensus 234 ~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v 264 (355)
T 3vu4_A 234 FRRGLDRADVVDMKWSTDGSKLAVVSDKWTL 264 (355)
T ss_dssp EECTTCCSCEEEEEECTTSCEEEEEETTCEE
T ss_pred EEcCCCCCcEEEEEECCCCCEEEEEECCCEE
Confidence 7899999999999999998643
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.19 E-value=2.3e-11 Score=131.90 Aligned_cols=105 Identities=10% Similarity=0.041 Sum_probs=88.4
Q ss_pred CCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 605 NSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 605 ~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
+|...|.+++|+| ++.+||+|+.|++|+|||+.+. .++..+ .|...|.+++|+|++..+||+++.||+|+
T Consensus 260 ~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~--------~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 260 GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA--------EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC--------CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEE
T ss_pred CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC--------ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEE
Confidence 6789999999999 9999999999999999998775 245444 34778999999997768999999999999
Q ss_pred EEECCCCcEE------------------------------------------EEEEEEeecCCceEEEecCccceEE
Q 004998 683 VGQVLHLIYF------------------------------------------SALYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 683 lWDv~tg~~~------------------------------------------~~v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|||+.+++.. ..+.+++|++.+.++++|+.|..-.
T Consensus 332 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~ 408 (416)
T 2pm9_A 332 VQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVS 408 (416)
T ss_dssp EEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBC
T ss_pred EEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEE
Confidence 9999877532 1256889999999999999886433
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.19 E-value=1.3e-10 Score=125.17 Aligned_cols=123 Identities=16% Similarity=0.159 Sum_probs=95.0
Q ss_pred hhhccccceEEeeeeccCCCCCC---CCCeEEEEECCCCCEEEEeeCC---CcEEEeeCCcccccccccccceEEec---
Q 004998 584 CKYLSFSKLRVKADLNQGDLLNS---SNLVCSLSFDRDGELFAAAGVN---KKIKVFECDAIINENRDIHYPVVEMA--- 654 (720)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~~~~~---~~~V~sv~f~~dg~~lat~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~--- 654 (720)
.+++...+.+++..++. ..+| ...|.+++|+|+|.+||+|+.| ++|+|||+.+. .++..+.
T Consensus 209 i~i~d~~~~~~~~~~~~--~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~--------~~~~~~~~~~ 278 (397)
T 1sq9_A 209 VQISELSTLRPLYNFES--QHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG--------ERIGSLSVPT 278 (397)
T ss_dssp EEEEETTTTEEEEEEEC--CC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC--------CEEEEECBC-
T ss_pred EEEEECCCCceeEEEec--cccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCC--------cccceeccCc
Confidence 34444445555555531 1236 7899999999999999999999 99999998765 2333332
Q ss_pred -----------CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------------------------E
Q 004998 655 -----------SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA----------------------------L 695 (720)
Q Consensus 655 -----------~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~----------------------------v 695 (720)
+...|.+++|+|+ +.+||+++.||+|+|||+.+++++.+ |
T Consensus 279 ~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v 357 (397)
T 1sq9_A 279 HSSQASLGEFAHSSWVMSLSFNDS-GETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGV 357 (397)
T ss_dssp -------CCBSBSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCE
T ss_pred ccccccccccccCCcEEEEEECCC-CCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCce
Confidence 6788999999995 56999999999999999999987654 5
Q ss_pred EEEeecCCc----------eEEEecCccceEE
Q 004998 696 YCIVLNKLL----------IIFRYGMFQEVKY 717 (720)
Q Consensus 696 ~~v~~~~~~----------~~~~~~~~~~~~~ 717 (720)
++++|++.+ ..+++|+.|..-+
T Consensus 358 ~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~ 389 (397)
T 1sq9_A 358 FDVKFLKKGWRSGMGADLNESLCCVCLDRSIR 389 (397)
T ss_dssp EEEEEECTTTSBSTTCTTSCEEEEEETTTEEE
T ss_pred eEEEeccccccccccccccceEEEecCCCcEE
Confidence 589999998 7899998886543
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.18 E-value=1e-10 Score=131.92 Aligned_cols=102 Identities=8% Similarity=0.007 Sum_probs=77.5
Q ss_pred CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccc-cccccccceEEe-----cCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 609 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIIN-ENRDIHYPVVEM-----ASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~-----~~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
.|.+++|||||++||+||.|++|+|||+.+..- .+.- ..+..+ +|.++|.+|+|+|++ ||+++.|++|+
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~--i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVr 205 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEF--YFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVF 205 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCC--EEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccc--eeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEE
Confidence 599999999999999999999999999876510 0000 012332 246799999999964 88888899999
Q ss_pred EEECCCCcE------EE-----EEEEEeecCCceEEEecCccceEE
Q 004998 683 VGQVLHLIY------FS-----ALYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 683 lWDv~tg~~------~~-----~v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
+||+.+++. +. .|++|+|+ +..+++++-.+|+.
T Consensus 206 lWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~~~tIkL 249 (588)
T 2j04_A 206 SMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTCPGYVHK 249 (588)
T ss_dssp EECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEECSSEEEE
T ss_pred EEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEeCCeEEE
Confidence 999988773 32 18999999 57777777566654
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.18 E-value=1.6e-10 Score=122.93 Aligned_cols=106 Identities=16% Similarity=0.183 Sum_probs=86.3
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccc----------cccccceEEe-cCCCCEEEEEEecCCCCEE
Q 004998 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN----------RDIHYPVVEM-ASRSKLSSICWNSYIKSQI 672 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~----------~~~~~~~~~~-~~~~~i~~v~~~~~~~~~l 672 (720)
.+|...|.+++|+|++.+||+|+.|++|+|||+....... .....++..+ .+...|.+++|+|+ +.+|
T Consensus 139 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l 217 (372)
T 1k8k_C 139 KPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSAN-GSRV 217 (372)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSS-SSEE
T ss_pred cccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCC-CCEE
Confidence 4568899999999999999999999999999975321000 0112344555 45778999999995 4699
Q ss_pred EEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEec
Q 004998 673 ASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 673 aS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~ 710 (720)
++++.||+|++||+++++++.+ |++++|++.+.++..|
T Consensus 218 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 218 AWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG 262 (372)
T ss_dssp EEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE
T ss_pred EEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE
Confidence 9999999999999999998876 8999999999999888
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.18 E-value=1.7e-10 Score=124.75 Aligned_cols=102 Identities=9% Similarity=0.168 Sum_probs=88.7
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
.+|...|.+++|+|+|++||+|+.|++|+|||+.+. .++..+. +...|.+++|+|++ +|++++.|++|+
T Consensus 244 ~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~--------~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~ 313 (425)
T 1r5m_A 244 IGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG--------NSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVR 313 (425)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB--------SCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC--------ccceEecCCCccEEEEEECCCC--EEEEEeCCCcEE
Confidence 356889999999999999999999999999998765 2344443 57789999999965 999999999999
Q ss_pred EEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 683 VGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 683 lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+||+.+++.+.. +.+++|+|.+..++.|+.|-.
T Consensus 314 i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 353 (425)
T 1r5m_A 314 LWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQ 353 (425)
T ss_dssp EEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSC
T ss_pred EEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCe
Confidence 999999998876 889999999999999988753
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.3e-10 Score=127.40 Aligned_cols=131 Identities=8% Similarity=0.038 Sum_probs=97.2
Q ss_pred hhhhhhcccc-ceEEeeee--ccCCCCCCCCCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEecC-
Q 004998 581 EGLCKYLSFS-KLRVKADL--NQGDLLNSSNLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS- 655 (720)
Q Consensus 581 ~~l~~~~~~~-~~~~~~~l--~~~~~~~~~~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~- 655 (720)
++..++|... .-+.+..+ +...+.+|...|.+++|+|+| .+||+|+.|++|+|||+++.... ..++..+.+
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~~ 272 (447)
T 3dw8_B 197 DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC----DRHSKLFEEP 272 (447)
T ss_dssp SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS----CTTCEEECCC
T ss_pred CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc----cceeeEeccC
Confidence 4455566655 33333333 223567889999999999999 99999999999999998875210 012334433
Q ss_pred C------------CCEEEEEEecCCCCEEEEEeCCCcEEEEECCC-CcEEEEEE----------------------EEee
Q 004998 656 R------------SKLSSICWNSYIKSQIASSNFEGVVQVGQVLH-LIYFSALY----------------------CIVL 700 (720)
Q Consensus 656 ~------------~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~t-g~~~~~v~----------------------~v~~ 700 (720)
. ..|.+++|+|+ +.+||+++. ++|+|||+++ ++++.++. +++|
T Consensus 273 ~~~~~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 350 (447)
T 3dw8_B 273 EDPSNRSFFSEIISSISDVKFSHS-GRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCW 350 (447)
T ss_dssp -----CCHHHHHTTCEEEEEECTT-SSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEE
T ss_pred CCccccccccccCceEEEEEECCC-CCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEE
Confidence 2 28999999995 569999998 9999999997 87776532 2899
Q ss_pred cCCceEEEecCccceEE
Q 004998 701 NKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 701 ~~~~~~~~~~~~~~~~~ 717 (720)
+|.+.++++|+.|-.-+
T Consensus 351 s~~~~~l~s~s~dg~v~ 367 (447)
T 3dw8_B 351 NGSDSVVMTGSYNNFFR 367 (447)
T ss_dssp CTTSSEEEEECSTTEEE
T ss_pred CCCCCEEEEeccCCEEE
Confidence 99999999999886544
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.4e-10 Score=128.57 Aligned_cols=100 Identities=14% Similarity=0.167 Sum_probs=83.7
Q ss_pred CCCCCCCCeEEEEECCC---CCEEEEeeCCCcEEEeeCCcccccccccccceEE-e-cCCCCEEEEEEecCCCCEEEEEe
Q 004998 602 DLLNSSNLVCSLSFDRD---GELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-M-ASRSKLSSICWNSYIKSQIASSN 676 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~d---g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~-~~~~~i~~v~~~~~~~~~laS~s 676 (720)
.+.+|...|.+|+|+|| |++||||+.|++|+|||+.+. .++.. + .|.+.|.+++|+ ++.+|||++
T Consensus 190 ~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~--------~~~~~~~~~h~~~v~~~~~s--d~~~l~s~~ 259 (450)
T 2vdu_B 190 PILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC--------FIVDKWLFGHKHFVSSICCG--KDYLLLSAG 259 (450)
T ss_dssp CSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT--------TCEEEECCCCSSCEEEEEEC--STTEEEEEE
T ss_pred eeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC--------ceeeeeecCCCCceEEEEEC--CCCEEEEEe
Confidence 34567899999999999 999999999999999998765 23333 3 457889999999 467999999
Q ss_pred CCCcEEEEECCCCcEEEEE--------------------------------EEEeecCCceEEEecC
Q 004998 677 FEGVVQVGQVLHLIYFSAL--------------------------------YCIVLNKLLIIFRYGM 711 (720)
Q Consensus 677 ~D~~v~lWDv~tg~~~~~v--------------------------------~~v~~~~~~~~~~~~~ 711 (720)
.|++|+|||+.+|+++.++ .+++|++.+.++..++
T Consensus 260 ~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 260 GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred CCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 9999999999999987653 4788999888887776
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.17 E-value=5.1e-11 Score=125.93 Aligned_cols=106 Identities=8% Similarity=0.015 Sum_probs=84.3
Q ss_pred CCCCCeEEEEECCCCC-EEEEeeC---CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCC--CCEEEEEeCC
Q 004998 605 NSSNLVCSLSFDRDGE-LFAAAGV---NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI--KSQIASSNFE 678 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~-~lat~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~--~~~laS~s~D 678 (720)
+|...|.+|+|+|+|. ++|+|+. |++|+|||+.+... .++....+...|.+++|+|+. +.+||+++.|
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d 89 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL------KLLREIEKAKPIKCGTFGATSLQQRYLATGDFG 89 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE------EEEEEEEESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc------cceeeecccCcEEEEEEcCCCCCCceEEEecCC
Confidence 4689999999999996 5667776 99999999876521 123445678899999999974 6799999999
Q ss_pred CcEEEEECCCCc-EEEE-------EEEE------eecCCceEEEecCccceE
Q 004998 679 GVVQVGQVLHLI-YFSA-------LYCI------VLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 679 ~~v~lWDv~tg~-~~~~-------v~~v------~~~~~~~~~~~~~~~~~~ 716 (720)
|+|++||+.+++ .+.. |.++ +|++.+..+.+|+.|..-
T Consensus 90 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i 141 (357)
T 3i2n_A 90 GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTV 141 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCE
T ss_pred CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeE
Confidence 999999999988 5554 7888 567889999999888543
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.17 E-value=9.4e-11 Score=139.10 Aligned_cols=122 Identities=14% Similarity=0.136 Sum_probs=99.6
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCE
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i 659 (720)
++..++|.+.+.+.+..+. +|.+.|.+++|+|||++||+|+.|++|+|||+.+. .++..+. |.+.|
T Consensus 34 ~g~v~iwd~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~--------~~~~~~~~~~~~v 100 (814)
T 3mkq_A 34 SGRVEIWNYETQVEVRSIQ-----VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTG--------EKVVDFEAHPDYI 100 (814)
T ss_dssp TSEEEEEETTTTEEEEEEE-----CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCE
T ss_pred CCEEEEEECCCCceEEEEe-----cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCC--------cEEEEEecCCCCE
Confidence 3455677777777777765 35889999999999999999999999999998776 2344443 57889
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCC-cEEEE-------EEEEeecC-CceEEEecCccceE
Q 004998 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHL-IYFSA-------LYCIVLNK-LLIIFRYGMFQEVK 716 (720)
Q Consensus 660 ~~v~~~~~~~~~laS~s~D~~v~lWDv~tg-~~~~~-------v~~v~~~~-~~~~~~~~~~~~~~ 716 (720)
++++|+|+ +.+||+++.||+|+|||+.++ ..... |.|++|+| .+..+.+|+.|..-
T Consensus 101 ~~~~~s~~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v 165 (814)
T 3mkq_A 101 RSIAVHPT-KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (814)
T ss_dssp EEEEECSS-SSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred EEEEEeCC-CCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeE
Confidence 99999996 469999999999999999988 44443 89999999 88899999887643
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.16 E-value=3.4e-10 Score=119.80 Aligned_cols=119 Identities=8% Similarity=0.049 Sum_probs=97.3
Q ss_pred hhccccc-eEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEE
Q 004998 585 KYLSFSK-LRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSIC 663 (720)
Q Consensus 585 ~~~~~~~-~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~ 663 (720)
.++...+ .+.+..+. .|...|.+++|+|||.+|++|+.|++|+|||+.+. .++..+.+...+.+++
T Consensus 200 ~i~d~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~--------~~~~~~~~~~~~~~~~ 266 (369)
T 3zwl_B 200 SKYDVSNNYEYVDSID-----LHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTL--------QVLKKYETDCPLNTAV 266 (369)
T ss_dssp EEEETTTTTEEEEEEE-----CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC--------CEEEEEECSSCEEEEE
T ss_pred EEEECCCCcEeEEEEe-----cCCCceeEEEECCCCCEEEEecCCceEEEEECCCC--------ceeeeecCCCCceeEE
Confidence 3444443 44555554 35789999999999999999999999999998775 3455566778899999
Q ss_pred EecCCCCEEEEEeCCC--------------cEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 664 WNSYIKSQIASSNFEG--------------VVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 664 ~~~~~~~~laS~s~D~--------------~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|+|+ +.+|++++.|+ .|++||+.+++.+.. |++++|+|.+..+++|+.|..-+
T Consensus 267 ~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~ 340 (369)
T 3zwl_B 267 ITPL-KEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIR 340 (369)
T ss_dssp ECSS-SSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred ecCC-CceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEE
Confidence 9996 46888888888 899999999998876 89999999999999999886543
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.16 E-value=3.1e-10 Score=123.58 Aligned_cols=120 Identities=13% Similarity=0.184 Sum_probs=94.5
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEE
Q 004998 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLS 660 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~ 660 (720)
+-.++|...+.+....+.. .|...|.+|+|+|||++||+|+.|++|+|||+.+. ..+..+ .|...|.
T Consensus 113 ~~v~lw~~~~~~~~~~~~~----~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~~~~~v~ 180 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAET----DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ--------TKLRTMAGHQARVG 180 (401)
T ss_dssp TEEEEEETTTCCEEEEEEC----CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC--------CEEEEECCCSSCEE
T ss_pred CeEEEeeCCCCcEeEeeec----CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC--------eEEEEecCCCCceE
Confidence 3445555555555554442 26889999999999999999999999999998765 234444 4578899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCC-CcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 661 SICWNSYIKSQIASSNFEGVVQVGQVLH-LIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 661 ~v~~~~~~~~~laS~s~D~~v~lWDv~t-g~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+++|++ ++|++++.||+|++||+++ +..+.. |.+++|++.+..+++|+.|..-
T Consensus 181 ~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v 241 (401)
T 4aez_A 181 CLSWNR---HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVV 241 (401)
T ss_dssp EEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEECC---CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeE
Confidence 999965 5999999999999999994 444444 8999999999999999987543
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.4e-10 Score=122.67 Aligned_cols=93 Identities=12% Similarity=0.188 Sum_probs=77.4
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEE--ecCCCCEEEEEeCCCcE
Q 004998 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICW--NSYIKSQIASSNFEGVV 681 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~--~~~~~~~laS~s~D~~v 681 (720)
.+|.+.|.+++|+|||++||+|+.|++|+|||+.+. .++....+...|.+++| +|+ +.+|++++.||+|
T Consensus 83 ~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~--------~~~~~~~~~~~v~~~~~~~~~~-~~~l~~~~~dg~i 153 (368)
T 3mmy_A 83 QMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSN--------QAIQIAQHDAPVKTIHWIKAPN-YSCVMTGSWDKTL 153 (368)
T ss_dssp EECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEEEEEEECSS-CEEEEEEETTSEE
T ss_pred ccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCC--------CceeeccccCceEEEEEEeCCC-CCEEEEccCCCcE
Confidence 346899999999999999999999999999998776 23445567889999999 774 5689999999999
Q ss_pred EEEECCCCcEEEE------EEEEeecCCce
Q 004998 682 QVGQVLHLIYFSA------LYCIVLNKLLI 705 (720)
Q Consensus 682 ~lWDv~tg~~~~~------v~~v~~~~~~~ 705 (720)
+|||+++++++.. +.++.+.....
T Consensus 154 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (368)
T 3mmy_A 154 KFWDTRSSNPMMVLQLPERCYCADVIYPMA 183 (368)
T ss_dssp EEECSSCSSCSEEEECSSCEEEEEEETTEE
T ss_pred EEEECCCCcEEEEEecCCCceEEEecCCee
Confidence 9999999998776 55666665433
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.15 E-value=1.8e-10 Score=124.40 Aligned_cols=106 Identities=10% Similarity=0.099 Sum_probs=81.0
Q ss_pred CCCeEEEEECCCCC-EEEEeeCCCcEEEeeC----CcccccccccccceEEec-----------CCCCEEEEEEecCCCC
Q 004998 607 SNLVCSLSFDRDGE-LFAAAGVNKKIKVFEC----DAIINENRDIHYPVVEMA-----------SRSKLSSICWNSYIKS 670 (720)
Q Consensus 607 ~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~----~~~~~~~~~~~~~~~~~~-----------~~~~i~~v~~~~~~~~ 670 (720)
...|.+++|+|||+ +||+|+.|++|+|||+ .+.... ... .+...+. +.+.|++++|+|+ ++
T Consensus 45 ~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~ 121 (425)
T 1r5m_A 45 LDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKY-WKL-TIIAELRHPFALSASSGKTTNQVTCLAWSHD-GN 121 (425)
T ss_dssp CSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------C-EEE-EEEEEEECCCCCC------CBCEEEEEECTT-SS
T ss_pred cCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCcccc-ccc-cccccccccccccccccCCCCceEEEEEcCC-CC
Confidence 68899999999999 9999999999999998 654200 000 0111111 3558999999995 57
Q ss_pred EEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceE
Q 004998 671 QIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 671 ~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+||+++.||+|+||| .+++.+.. |++++|+|.+..+.+++.|..-
T Consensus 122 ~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (425)
T 1r5m_A 122 SIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVT 173 (425)
T ss_dssp EEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCE
T ss_pred EEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeE
Confidence 999999999999999 67777665 8999999999999998877543
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.8e-10 Score=119.37 Aligned_cols=97 Identities=14% Similarity=0.056 Sum_probs=82.9
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~lW 684 (720)
|...|.+++|+|++. |++|+.|++|+|||+.+. .++..+. +.+.|++++|+|++ .|++++.||+|+||
T Consensus 183 ~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~v~iw 251 (313)
T 3odt_A 183 HNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTG--------DVLRTYEGHESFVYCIKLLPNG--DIVSCGEDRTVRIW 251 (313)
T ss_dssp CSSCEEEEEEEETTE-EEEEETTSEEEEEETTTC--------CEEEEEECCSSCEEEEEECTTS--CEEEEETTSEEEEE
T ss_pred CcccEEEEEEcCCCe-EEEccCCCeEEEEECCch--------hhhhhhhcCCceEEEEEEecCC--CEEEEecCCEEEEE
Confidence 688999999999999 999999999999998765 2454443 57889999999965 59999999999999
Q ss_pred ECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004998 685 QVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 685 Dv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
|+.+++++.. |++++|++.+.++ .|+.|-
T Consensus 252 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~dg 287 (313)
T 3odt_A 252 SKENGSLKQVITLPAISIWSVDCMSNGDII-VGSSDN 287 (313)
T ss_dssp CTTTCCEEEEEECSSSCEEEEEECTTSCEE-EEETTS
T ss_pred ECCCCceeEEEeccCceEEEEEEccCCCEE-EEeCCC
Confidence 9999998876 8999999999855 455554
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.13 E-value=5e-10 Score=116.34 Aligned_cols=115 Identities=15% Similarity=0.163 Sum_probs=87.3
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCccccccc------c-------------------------------
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENR------D------------------------------- 645 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~------~------------------------------- 645 (720)
+.+|...+.+++|+++|++|+||+.|++|+|||+++...... .
T Consensus 146 ~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~l 225 (318)
T 4ggc_A 146 LSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRI 225 (318)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEE
T ss_pred EcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEE
Confidence 456789999999999999999999999999999875311100 0
Q ss_pred ----cccceEEecCCCCEEEEEEecCCCCEEE-EEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCcc
Q 004998 646 ----IHYPVVEMASRSKLSSICWNSYIKSQIA-SSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 646 ----~~~~~~~~~~~~~i~~v~~~~~~~~~la-S~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
.........+...+.+++|+|.+..+++ +++.|++|+|||+.+++++.+ |+|++|+|.+..+++|+.|
T Consensus 226 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D 305 (318)
T 4ggc_A 226 WNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAAD 305 (318)
T ss_dssp EETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred EecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC
Confidence 0001112233556788999997654433 344799999999999999987 8999999999999999999
Q ss_pred ceEE
Q 004998 714 EVKY 717 (720)
Q Consensus 714 ~~~~ 717 (720)
..-.
T Consensus 306 ~~v~ 309 (318)
T 4ggc_A 306 ETLR 309 (318)
T ss_dssp TEEE
T ss_pred CeEE
Confidence 7543
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.13 E-value=1.7e-10 Score=127.93 Aligned_cols=96 Identities=15% Similarity=0.231 Sum_probs=78.2
Q ss_pred CCCCCCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+|+|+|+ +.+||||+.|++|+|||+++.. .......|...|++++|+|+ +++||+|+.||+|
T Consensus 145 ~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~-------~~~~~~~~~~~v~~v~wspd-g~~lasgs~dg~v 216 (434)
T 2oit_A 145 LKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV-------KVCATLPSTVAVTSVCWSPK-GKQLAVGKQNGTV 216 (434)
T ss_dssp CCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE-------EEEEEECGGGCEEEEEECTT-SSCEEEEETTSCE
T ss_pred cCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc-------ceeeccCCCCceeEEEEcCC-CCEEEEEcCCCcE
Confidence 4467899999999998 7899999999999999987651 12233345678999999996 5799999999999
Q ss_pred EEEECCCCcEEE--------------EEEEEeecCCceEE
Q 004998 682 QVGQVLHLIYFS--------------ALYCIVLNKLLIIF 707 (720)
Q Consensus 682 ~lWDv~tg~~~~--------------~v~~v~~~~~~~~~ 707 (720)
++||++ ++... .|.+++|++....+
T Consensus 217 ~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 217 VQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFA 255 (434)
T ss_dssp EEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEE
T ss_pred EEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEE
Confidence 999998 54432 47899999887766
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.13 E-value=3e-10 Score=124.60 Aligned_cols=106 Identities=9% Similarity=0.113 Sum_probs=87.2
Q ss_pred CCCCCCCeEEEEECCCCC-EEEE--eeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEE--eC
Q 004998 603 LLNSSNLVCSLSFDRDGE-LFAA--AGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS--NF 677 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~-~lat--~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~--s~ 677 (720)
...|.+.|.+++|+|++. ++|+ |+.|++|+|||+.++ .++..+.+...|.+++|+|+++ .|+++ +.
T Consensus 272 ~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~--------~~~~~~~~~~~v~~~~~~~~~~-~lv~~sg~~ 342 (420)
T 4gga_A 272 FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG--------ACLSAVDAHSQVCSILWSPHYK-ELISGHGFA 342 (420)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT--------EEEEEEECSSCEEEEEEETTTT-EEEEEECTT
T ss_pred ecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc--------ccceeeccccceeeeeecCCCC-eEEEEEecC
Confidence 346788999999999775 5665 457999999998876 3455566677899999999765 55443 36
Q ss_pred CCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 678 EGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 678 D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|++|+|||+.+++++.+ |++++|+|.+..+++|+.|+.-.
T Consensus 343 d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvr 389 (420)
T 4gga_A 343 QNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLR 389 (420)
T ss_dssp TCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEE
T ss_pred CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEE
Confidence 99999999999999987 89999999999999999998544
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.12 E-value=3e-10 Score=125.62 Aligned_cols=115 Identities=8% Similarity=0.057 Sum_probs=94.0
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCE
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i 659 (720)
++..+++...+.+.+..+ .+|.+.|.+++|+|+|.+||+|+.|++|+|||+.+. .++..+ .|...|
T Consensus 289 d~~i~vwd~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~--------~~~~~~~~h~~~v 355 (464)
T 3v7d_B 289 DNTLIVWDVAQMKCLYIL-----SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG--------ELMYTLQGHTALV 355 (464)
T ss_dssp TSCEEEEETTTTEEEEEE-----CCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCE
T ss_pred CCeEEEEECCCCcEEEEe-----cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC--------cEEEEEeCCCCcE
Confidence 444555555566666555 456899999999999999999999999999998776 245555 357789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecC
Q 004998 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 660 ~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~ 711 (720)
.+++|++ .+|+|++.||+|++||+.+++.... +.+++|++.+..++.|+
T Consensus 356 ~~~~~~~---~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 410 (464)
T 3v7d_B 356 GLLRLSD---KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS 410 (464)
T ss_dssp EEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE
T ss_pred EEEEEcC---CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec
Confidence 9999985 5899999999999999999887665 56789999999999988
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.12 E-value=2.2e-10 Score=126.87 Aligned_cols=107 Identities=14% Similarity=0.013 Sum_probs=86.3
Q ss_pred CCCCCCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCC--cccccccccccceEEe---cCCCCEEEEEEecCCCCEEEEE
Q 004998 602 DLLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECD--AIINENRDIHYPVVEM---ASRSKLSSICWNSYIKSQIASS 675 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~---~~~~~i~~v~~~~~~~~~laS~ 675 (720)
.+.+|.+.|.+++|+|||++| |+|+.|++|+|||+. +. .++..+ .+...|++|+|+|+ +.+||+|
T Consensus 97 ~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~--------~~~~~~~~~~~~~~v~~~~~sp~-~~~l~~~ 167 (450)
T 2vdu_B 97 GAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSK--------NVLKLRKRFCFSKRPNAISIAED-DTTVIIA 167 (450)
T ss_dssp ---CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS--------SCEEEEEEEECSSCEEEEEECTT-SSEEEEE
T ss_pred CCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC--------ceeeeeecccCCCCceEEEEcCC-CCEEEEE
Confidence 345678899999999999995 999999999999987 43 123333 44678999999996 4699999
Q ss_pred eCCCcEEEEECCCCcEEE----E-------EEEEeecCC---ceEEEecCccceEE
Q 004998 676 NFEGVVQVGQVLHLIYFS----A-------LYCIVLNKL---LIIFRYGMFQEVKY 717 (720)
Q Consensus 676 s~D~~v~lWDv~tg~~~~----~-------v~~v~~~~~---~~~~~~~~~~~~~~ 717 (720)
+.||.|.+||+.+++... . |+|++|+|. +.++++|+.|..-+
T Consensus 168 ~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~ 223 (450)
T 2vdu_B 168 DKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIK 223 (450)
T ss_dssp ETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEE
T ss_pred eCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEE
Confidence 999999999998877542 1 999999999 99999999885433
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.11 E-value=5.2e-10 Score=122.72 Aligned_cols=102 Identities=11% Similarity=0.200 Sum_probs=85.5
Q ss_pred CCCCeEEEE--ECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec---CCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 606 SSNLVCSLS--FDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA---SRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 606 ~~~~V~sv~--f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~---~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
+...+.++. |++|+.+||+|+.|++|+|||+++. .++..+. |.+.|++++|+|+ +.+||+|+.||+
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--------~~~~~~~~~~h~~~v~~~~~s~~-~~~l~s~~~dg~ 237 (437)
T 3gre_A 167 KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTL--------ERLQIIENSPRHGAVSSICIDEE-CCVLILGTTRGI 237 (437)
T ss_dssp SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTC--------CEEEEEECCGGGCCEEEEEECTT-SCEEEEEETTSC
T ss_pred cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCC--------eeeEEEccCCCCCceEEEEECCC-CCEEEEEcCCCe
Confidence 567788888 6799999999999999999998775 2444443 5678999999996 679999999999
Q ss_pred EEEEECCCCcEEEE--------EEEE----eecCCceEEEecCccceE
Q 004998 681 VQVGQVLHLIYFSA--------LYCI----VLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWDv~tg~~~~~--------v~~v----~~~~~~~~~~~~~~~~~~ 716 (720)
|+|||+++++++.+ |.++ +|++.+.++++|+.|..-
T Consensus 238 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i 285 (437)
T 3gre_A 238 IDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFL 285 (437)
T ss_dssp EEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEE
T ss_pred EEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcE
Confidence 99999999998875 7888 666778899999988643
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.10 E-value=6e-10 Score=115.29 Aligned_cols=110 Identities=12% Similarity=0.153 Sum_probs=83.9
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC
Q 004998 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~ 669 (720)
..++++.+++ +|.+.|.+|+| |++.+||||+.|++|+|||+.+.. .......+...|.+++|+|+ +
T Consensus 6 ~~~~~~~~l~-----~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~-------~~~~~~~~~~~v~~~~~~~~-~ 71 (313)
T 3odt_A 6 TGYQLSATLK-----GHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQW-------LGTVVYTGQGFLNSVCYDSE-K 71 (313)
T ss_dssp CCCEEEEEEC-----CCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSE-------EEEEEEECSSCEEEEEEETT-T
T ss_pred ccHHHHHHhh-----CCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCE-------EEEEeecCCccEEEEEECCC-C
Confidence 3455666664 46899999999 999999999999999999986541 12223345788999999995 5
Q ss_pred CEEEEEeCCCcEEEEECCCC---cEEEE-------EEEEeecCCceEEEecCccce
Q 004998 670 SQIASSNFEGVVQVGQVLHL---IYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 670 ~~laS~s~D~~v~lWDv~tg---~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+||+++.||+|++||+... +.+.. |.+++|+ +..+.+|+.|..
T Consensus 72 ~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~l~~~~~d~~ 125 (313)
T 3odt_A 72 ELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ--DGVVISGSWDKT 125 (313)
T ss_dssp TEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE--TTEEEEEETTSE
T ss_pred CEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec--CCEEEEEeCCCC
Confidence 69999999999999998754 33333 8899994 556777776644
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.10 E-value=2e-10 Score=136.32 Aligned_cols=124 Identities=11% Similarity=0.107 Sum_probs=93.6
Q ss_pred hhhhhhcccc--ceEEeeeeccCCCCCCCCCeEEEEECCC--CCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cC
Q 004998 581 EGLCKYLSFS--KLRVKADLNQGDLLNSSNLVCSLSFDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-AS 655 (720)
Q Consensus 581 ~~l~~~~~~~--~~~~~~~l~~~~~~~~~~~V~sv~f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~ 655 (720)
++..++|... +.+.+..+ .+|.+.|.+++|+|+ |.+|||||.|++|+|||+.+... .++..+ .|
T Consensus 30 dg~I~vwd~~~~~~~~~~~l-----~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~------~~~~~~~~h 98 (753)
T 3jro_A 30 DKTIKIFEVEGETHKLIDTL-----TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW------SQIAVHAVH 98 (753)
T ss_dssp TTEEEEEEEETTEEEEEEEE-----CCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEE------EEEEEECCC
T ss_pred CCcEEEEecCCCCCccceec-----cCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcc------cccccccCC
Confidence 3444555544 44444444 456899999999988 99999999999999999876410 123333 45
Q ss_pred CCCEEEEEEecCC-CCEEEEEeCCCcEEEEECCCCcEEE---------EEEEEeecC-------------CceEEEecCc
Q 004998 656 RSKLSSICWNSYI-KSQIASSNFEGVVQVGQVLHLIYFS---------ALYCIVLNK-------------LLIIFRYGMF 712 (720)
Q Consensus 656 ~~~i~~v~~~~~~-~~~laS~s~D~~v~lWDv~tg~~~~---------~v~~v~~~~-------------~~~~~~~~~~ 712 (720)
...|++++|+|+. +++|++|+.||+|+|||++++.... .|.+++|+| .+..+++|+-
T Consensus 99 ~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~ 178 (753)
T 3jro_A 99 SASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA 178 (753)
T ss_dssp SSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEET
T ss_pred CCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEEC
Confidence 7889999999963 6799999999999999999873221 189999999 4788888887
Q ss_pred cce
Q 004998 713 QEV 715 (720)
Q Consensus 713 ~~~ 715 (720)
|-.
T Consensus 179 dg~ 181 (753)
T 3jro_A 179 DNL 181 (753)
T ss_dssp TSC
T ss_pred CCe
Confidence 654
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.09 E-value=5.1e-10 Score=123.82 Aligned_cols=100 Identities=11% Similarity=0.143 Sum_probs=82.1
Q ss_pred CCCC-CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 605 NSSN-LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 605 ~~~~-~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
+|.+ +|.++.| ++.+|||||.|++|+|||+.+. .++..+ .|.+.|.+++|+|++ +|+||+.||+|+
T Consensus 119 ~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~--------~~~~~~~~h~~~V~~l~~~~~~--~l~s~s~dg~i~ 186 (464)
T 3v7d_B 119 GHMTSVITCLQF--EDNYVITGADDKMIRVYDSINK--------KFLLQLSGHDGGVWALKYAHGG--ILVSGSTDRTVR 186 (464)
T ss_dssp CCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCEEEEEECSTT--EEEEEETTSCEE
T ss_pred CCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCC--------cEEEEEeCCCcCEEEEEEcCCC--EEEEEeCCCCEE
Confidence 3444 4677777 5689999999999999998776 244444 358899999999854 999999999999
Q ss_pred EEECCCCcEEEE-------EEEEeec--CCceEEEecCccceE
Q 004998 683 VGQVLHLIYFSA-------LYCIVLN--KLLIIFRYGMFQEVK 716 (720)
Q Consensus 683 lWDv~tg~~~~~-------v~~v~~~--~~~~~~~~~~~~~~~ 716 (720)
|||+.+++++.+ |.|++|+ +.+..+.+|+.|..-
T Consensus 187 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i 229 (464)
T 3v7d_B 187 VWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTL 229 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCE
T ss_pred EEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcE
Confidence 999999998876 8899998 577889999887644
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.08 E-value=2.9e-10 Score=120.91 Aligned_cols=97 Identities=5% Similarity=0.059 Sum_probs=70.3
Q ss_pred CCCeEEEEECCC----CCEEEEeeC--------------------CCcEEEeeCCcccccccccccceEEecCCCCEEEE
Q 004998 607 SNLVCSLSFDRD----GELFAAAGV--------------------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 607 ~~~V~sv~f~~d----g~~lat~~~--------------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v 662 (720)
.+.|++|+|+|| ++++|++|. |++|++|++... .........+...++.+
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~d------G~~~~s~~~~~~~v~~l 184 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAED------GGGKENQFLMPPEETIL 184 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTT------SCEEEEEEECCCSSCEE
T ss_pred ccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCC------CceeeeeccCCCceeeE
Confidence 357899999999 888888774 777777776431 01111222446678888
Q ss_pred EEec--CCCCEEEEEeCCCcEEEEECCCCcEEEEE----------EEEeecCCceEEEe
Q 004998 663 CWNS--YIKSQIASSNFEGVVQVGQVLHLIYFSAL----------YCIVLNKLLIIFRY 709 (720)
Q Consensus 663 ~~~~--~~~~~laS~s~D~~v~lWDv~tg~~~~~v----------~~v~~~~~~~~~~~ 709 (720)
+|+| .++..|||+|+|++|||||+.||++++++ .+++|+|.+..+++
T Consensus 185 ~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs 243 (356)
T 2w18_A 185 TFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIV 243 (356)
T ss_dssp EEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEE
T ss_pred EeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEE
Confidence 8888 24579999999999999999999999874 46789999998744
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.07 E-value=1.3e-09 Score=113.21 Aligned_cols=122 Identities=12% Similarity=0.164 Sum_probs=96.9
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCE
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i 659 (720)
+.-.++|...+.+++..++ +.+|...|.+|+|+|+|++|||||.|++|+|||+.+. .++..+ .|...+
T Consensus 44 D~tV~iWd~~tg~~~~~~~---~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~--------~~~~~~~~h~~~~ 112 (318)
T 4ggc_A 44 DNSVYLWSASSGDILQLLQ---MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--------KRLRNMTSHSARV 112 (318)
T ss_dssp TTEEEEEETTTCCEEEEEE---CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT--------EEEEEEECCSSCE
T ss_pred CCEEEEEECCCCCEEEEEE---ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc--------eeEEEecCccceE
Confidence 4456777777777777665 2367889999999999999999999999999998876 234444 346667
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEE-EE-------EEEEeecCCceEEEecCccceE
Q 004998 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYF-SA-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 660 ~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~-~~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
.++++++ ..|+|++.|+.+++|+..++... .+ +.++.|++.+..+.+|+.|..-
T Consensus 113 ~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i 174 (318)
T 4ggc_A 113 GSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLV 174 (318)
T ss_dssp EEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEeecCC---CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcce
Confidence 7777664 58999999999999999887543 32 7899999999999999988643
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.07 E-value=7.4e-10 Score=119.26 Aligned_cols=103 Identities=13% Similarity=0.142 Sum_probs=87.5
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec----C---CCCEEEEEEecCCCCEEEEEeC
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA----S---RSKLSSICWNSYIKSQIASSNF 677 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~----~---~~~i~~v~~~~~~~~~laS~s~ 677 (720)
.|...|.+++|+|+| +||+|+.|++|+|||+++. .++..+. | ...|.+++|+|+ +.+||+++.
T Consensus 184 ~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~h~~~~~~i~~i~~~~~-~~~l~~~~~ 253 (397)
T 1sq9_A 184 TPSQFATSVDISERG-LIATGFNNGTVQISELSTL--------RPLYNFESQHSMINNSNSIRSVKFSPQ-GSLLAIAHD 253 (397)
T ss_dssp SSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTT--------EEEEEEECCC---CCCCCEEEEEECSS-TTEEEEEEE
T ss_pred CCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCC--------ceeEEEeccccccccCCccceEEECCC-CCEEEEEec
Confidence 468899999999999 9999999999999998765 2444444 4 778999999996 569999999
Q ss_pred C---CcEEEEECCCCcEEEE--------------------EEEEeecCCceEEEecCccceEE
Q 004998 678 E---GVVQVGQVLHLIYFSA--------------------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 678 D---~~v~lWDv~tg~~~~~--------------------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
| |+|+|||+++++.+.+ |++++|+|.+.++.+|+.|..-+
T Consensus 254 d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 316 (397)
T 1sq9_A 254 SNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR 316 (397)
T ss_dssp ETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred CCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 9 9999999999987653 67899999999999998876433
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.2e-09 Score=117.47 Aligned_cols=105 Identities=10% Similarity=0.045 Sum_probs=89.2
Q ss_pred CCCCCCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC--CEEEEEeCCC
Q 004998 603 LLNSSNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK--SQIASSNFEG 679 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~--~~laS~s~D~ 679 (720)
..+|...|.+++|+| ++.+||+|+.|++|+|||+.+. .++..+.+...+.+++|+|... .+|++++.||
T Consensus 95 ~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (408)
T 4a11_B 95 PDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTL--------QTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGP 166 (408)
T ss_dssp TTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTT--------EEEEEEECSSCEEEEEECSSCSSCCEEEEEESSS
T ss_pred cccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCC--------ccceeccCCCceeeeEeecCCCCCcEEEEEcCCC
Confidence 456899999999999 7789999999999999998775 2455556678899999998643 3999999999
Q ss_pred cEEEEECCCCcEEEE-------EEEEeecCCce-EEEecCccce
Q 004998 680 VVQVGQVLHLIYFSA-------LYCIVLNKLLI-IFRYGMFQEV 715 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~-------v~~v~~~~~~~-~~~~~~~~~~ 715 (720)
.|++||+++++.+.. |.|++|+|.+. ++++|+.|-.
T Consensus 167 ~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~ 210 (408)
T 4a11_B 167 KVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSR 210 (408)
T ss_dssp SEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSC
T ss_pred eEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCc
Confidence 999999999987765 89999999998 5778877654
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.05 E-value=2.2e-10 Score=120.66 Aligned_cols=97 Identities=10% Similarity=0.135 Sum_probs=80.5
Q ss_pred CCCCCeEEEEECCCCC-EEEEeeCCCcEEEeeC-CcccccccccccceEEec--CCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 605 NSSNLVCSLSFDRDGE-LFAAAGVNKKIKVFEC-DAIINENRDIHYPVVEMA--SRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~-~~~~~~~~~~~~~~~~~~--~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
+|...|.+++|+|+|+ +||+|+.|++|+|||+ .+.. ...... |...|.+++|+| +++|++++.|++
T Consensus 54 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~--------~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~ 123 (342)
T 1yfq_A 54 RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS--------FQALTNNEANLGICRICKYG--DDKLIAASWDGL 123 (342)
T ss_dssp ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS--------EEECBSCCCCSCEEEEEEET--TTEEEEEETTSE
T ss_pred ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc--------eEeccccCCCCceEEEEeCC--CCEEEEEcCCCe
Confidence 5688999999999999 9999999999999998 6652 122223 677899999999 579999999999
Q ss_pred EEEEECCC---------CcEEEE------EEEEeecCCceEEEecCcc
Q 004998 681 VQVGQVLH---------LIYFSA------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 681 v~lWDv~t---------g~~~~~------v~~v~~~~~~~~~~~~~~~ 713 (720)
|++||+++ ++++.+ +++++|++.+ +..|+.|
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d 169 (342)
T 1yfq_A 124 IEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNN 169 (342)
T ss_dssp EEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEEST
T ss_pred EEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCC
Confidence 99999988 765543 8999999988 5555555
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.04 E-value=1.4e-09 Score=119.86 Aligned_cols=116 Identities=9% Similarity=0.182 Sum_probs=91.6
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec----CC
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA----SR 656 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~----~~ 656 (720)
++..+++...+.+.+..+. +|...|.++++ ++.+|++|+.|++|+|||+.+. .++..+. +.
T Consensus 298 d~~i~i~d~~~~~~~~~~~-----~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~--------~~~~~~~~~~~~~ 362 (445)
T 2ovr_B 298 DTSIRVWDVETGNCIHTLT-----GHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTG--------QCLQTLQGPNKHQ 362 (445)
T ss_dssp TSCEEEEETTTCCEEEEEC-----CCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTC--------CEEEEECSTTSCS
T ss_pred CCeEEEEECCCCCEEEEEc-----CCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCC--------cEEEEEccCCCCC
Confidence 3344555555555555554 45788888887 4679999999999999998765 2344443 56
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------------EEEEeecCCceEEEecCccc
Q 004998 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 657 ~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------------v~~v~~~~~~~~~~~~~~~~ 714 (720)
..|.+++|++ ++||+|+.||+|+|||+.+|+.+.+ |++++|+|.+..++.|+.|.
T Consensus 363 ~~v~~~~~~~---~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 363 SAVTCLQFNK---NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp SCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSS
T ss_pred CCEEEEEECC---CEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCC
Confidence 7899999975 5899999999999999999998764 79999999999999999886
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.02 E-value=2.2e-09 Score=115.59 Aligned_cols=117 Identities=8% Similarity=-0.005 Sum_probs=90.8
Q ss_pred hhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEE
Q 004998 584 CKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v 662 (720)
.+.+...+.+++..+.+ ...|.+++|+|||+++ ++++.|++|++||+.+. ..+..+.+...+.++
T Consensus 14 v~v~d~~~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~--------~~~~~~~~~~~v~~~ 79 (391)
T 1l0q_A 14 ISVIDVTSNKVTATIPV------GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN--------NVIATVPAGSSPQGV 79 (391)
T ss_dssp EEEEETTTTEEEEEEEC------SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT--------EEEEEEECSSSEEEE
T ss_pred EEEEECCCCeEEEEeec------CCCcceEEECCCCCEEEEECCCCCeEEEEECCCC--------eEEEEEECCCCccce
Confidence 45555566677777763 2348999999999975 78889999999998765 244555556689999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEE-EecCccc
Q 004998 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIF-RYGMFQE 714 (720)
Q Consensus 663 ~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~-~~~~~~~ 714 (720)
+|+|+++.++++++.|++|++||+.+++.+.. +.+++|++.+..+ ..++-|.
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 138 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDK 138 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTT
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCC
Confidence 99997654446666789999999999998876 7899999999865 6666554
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=98.99 E-value=3.2e-09 Score=121.00 Aligned_cols=119 Identities=13% Similarity=0.158 Sum_probs=94.5
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCC---CeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEe---
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSN---LVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--- 653 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~---~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--- 653 (720)
++..++|...+.+.+..++ +|.. .|.+++|+|+ |++||+|+.|++|+|||+.+. .++..+
T Consensus 182 d~~v~vwd~~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~--------~~~~~~~~~ 248 (615)
T 1pgu_A 182 DGSVVFYQGPPFKFSASDR-----THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG--------EFLKYIEDD 248 (615)
T ss_dssp TTEEEEEETTTBEEEEEEC-----SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC--------CEEEECCBT
T ss_pred CCcEEEEeCCCcceeeeec-----ccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCC--------CEeEEeccc
Confidence 3455666667777777775 3466 8999999999 999999999999999998765 245555
Q ss_pred --cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-----------EEEEeecCCceEEEecCccce
Q 004998 654 --ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-----------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 654 --~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-----------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+...|.+++|+ ++.+|++++.||+|++||+++++++.+ +.++.|+ .+..+..|+.|..
T Consensus 249 ~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~ 320 (615)
T 1pgu_A 249 QEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGT 320 (615)
T ss_dssp TBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSC
T ss_pred ccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCC
Confidence 567889999999 467999999999999999999998876 4566775 6666777766543
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=98.95 E-value=5.3e-09 Score=115.11 Aligned_cols=96 Identities=11% Similarity=0.137 Sum_probs=78.8
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
+|...|.+++| ||++||+|+.|++|+|||+.+. .++..+ .|...|.+++|+ +++||||+.||+|+|
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~--------~~~~~~~~h~~~v~~l~~~---~~~l~sg~~dg~i~v 197 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTL--------ECKRILTGHTGSVLCLQYD---ERVIITGSSDSTVRV 197 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSC--------CEEEEECCCSSCEEEEECC---SSEEEEEETTSCEEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCC--------eEEEEEcCCCCcEEEEEEC---CCEEEEEcCCCeEEE
Confidence 45678999988 7999999999999999998765 233344 457789999993 469999999999999
Q ss_pred EECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 684 GQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 684 WDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
||+.+|+++.+ |.+++|++. .+++|+.|..
T Consensus 198 wd~~~~~~~~~~~~h~~~v~~l~~~~~--~l~s~s~dg~ 234 (435)
T 1p22_A 198 WDVNTGEMLNTLIHHCEAVLHLRFNNG--MMVTCSKDRS 234 (435)
T ss_dssp EESSSCCEEEEECCCCSCEEEEECCTT--EEEEEETTSC
T ss_pred EECCCCcEEEEEcCCCCcEEEEEEcCC--EEEEeeCCCc
Confidence 99999999876 899999854 6777776654
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=98.94 E-value=6.6e-09 Score=114.31 Aligned_cols=98 Identities=13% Similarity=0.218 Sum_probs=82.7
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
+.+|...|.+++| +|++||+|+.|++|+|||+.+. .++..+. +...|.+++|++ ++|++|+.||+|
T Consensus 252 ~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~--------~~~~~~~~~~~~v~~~~~~~---~~l~~g~~dg~i 318 (435)
T 1p22_A 252 LVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTC--------EFVRTLNGHKRGIACLQYRD---RLVVSGSSDNTI 318 (435)
T ss_dssp ECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTC--------CEEEEEECCSSCEEEEEEET---TEEEEEETTSCE
T ss_pred ecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcC--------cEEEEEcCCCCcEEEEEeCC---CEEEEEeCCCeE
Confidence 4577899999999 8899999999999999998775 2444443 577899999964 599999999999
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 682 QVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 682 ~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+|||+++|+++.+ |.|++| .+..+++|+.|..
T Consensus 319 ~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~ 357 (435)
T 1p22_A 319 RLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGK 357 (435)
T ss_dssp EEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSC
T ss_pred EEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc
Confidence 9999999999887 889999 5667888887753
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=98.94 E-value=5.6e-09 Score=115.04 Aligned_cols=115 Identities=10% Similarity=0.120 Sum_probs=89.6
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCE
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKL 659 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i 659 (720)
++..+.|...+.+.+..++ +|.+.|.+++|+ +.+|||||.|++|+|||+.+. .++..+ .|...|
T Consensus 138 dg~i~vwd~~~~~~~~~~~-----~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~--------~~~~~~~~h~~~v 202 (445)
T 2ovr_B 138 DNTLKVWSAVTGKCLRTLV-----GHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETG--------ECIHTLYGHTSTV 202 (445)
T ss_dssp TSCEEEEETTTCCEEEECC-----CCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTT--------EEEEEECCCSSCE
T ss_pred CCcEEEEECCCCcEEEEEc-----CCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcC--------cEEEEECCCCCcE
Confidence 4455666666666666554 568999999997 679999999999999998775 234444 357789
Q ss_pred EEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 660 SSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 660 ~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.+++|++ +.|++|+.||+|++||+.+++++.. |.|++| .+..+++|+.|..
T Consensus 203 ~~~~~~~---~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~ 260 (445)
T 2ovr_B 203 RCMHLHE---KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFM 260 (445)
T ss_dssp EEEEEET---TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSC
T ss_pred EEEEecC---CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCE
Confidence 9999975 5799999999999999999998876 788998 4566777766643
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=98.94 E-value=2.8e-09 Score=116.36 Aligned_cols=120 Identities=10% Similarity=0.027 Sum_probs=93.3
Q ss_pred hhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEE
Q 004998 585 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSIC 663 (720)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~ 663 (720)
..+...+.+++..+..+.+.+|...|.+++|+|+|.++++++.|++|++||+.+. .++..+ .+...+.+++
T Consensus 147 ~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~ 218 (433)
T 3bws_A 147 DVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTL--------AYKATVDLTGKWSKILL 218 (433)
T ss_dssp EEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTC--------CEEEEEECSSSSEEEEE
T ss_pred EEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCc--------eEEEEEcCCCCCeeEEE
Confidence 3444444555544444455678899999999999999999999999999998765 233333 3466899999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCc
Q 004998 664 WNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 664 ~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~ 712 (720)
|+|++..++++++.|++|++||+.+++.+.. +.+++|+|.+..+..++.
T Consensus 219 ~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 219 YDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEE
T ss_pred EcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEEC
Confidence 9997654446777899999999999998876 789999999988777664
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=98.91 E-value=2e-10 Score=124.42 Aligned_cols=90 Identities=7% Similarity=0.063 Sum_probs=64.7
Q ss_pred CCCCCceecccceeecCC--CCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCC
Q 004998 74 GDHLRNQGGLSGVCENEA--AIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPS 150 (720)
Q Consensus 74 l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~ 150 (720)
..|+|+++++........ .....++|||| .|.+|.+++. . .++..++.||+.+|.|||++|||||||||.
T Consensus 162 kE~~nL~rL~~~gv~vp~p~~~~~~~LVME~i~G~~L~~l~~-----~--~~~~~l~~qll~~l~~lH~~gIVHrDLKp~ 234 (397)
T 4gyi_A 162 KEFAFMKALYEEGFPVPEPIAQSRHTIVMSLVDALPMRQVSS-----V--PDPASLYADLIALILRLAKHGLIHGDFNEF 234 (397)
T ss_dssp HHHHHHHHHHHTTCSCCCEEEEETTEEEEECCSCEEGGGCCC-----C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTT
T ss_pred HHHHHHHHHHhcCCCCCeeeeccCceEEEEecCCccHhhhcc-----c--HHHHHHHHHHHHHHHHHHHCCCcCCCCCHH
Confidence 346666666552221110 00112699999 8888876431 1 235678999999999999999999999999
Q ss_pred cEEEccCC----------ceEEeccCcccC
Q 004998 151 CFVMSSFN----------HVSFIESASCSD 170 (720)
Q Consensus 151 NILl~~~~----------~vkliDfg~a~~ 170 (720)
|||++.++ .+.||||+.+..
T Consensus 235 NILl~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 235 NILIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp SEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred HEEEeCCCCcccccccccceEEEEeCCccc
Confidence 99999877 389999998744
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=98.91 E-value=1.3e-08 Score=109.45 Aligned_cols=119 Identities=8% Similarity=-0.028 Sum_probs=91.9
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecCCCCEE
Q 004998 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 660 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~ 660 (720)
+..+++...+.+++..+.+ ...|.+++|+|||++| ++++.|++|++||+.+. ..+..+.+...+.
T Consensus 54 ~~i~v~d~~~~~~~~~~~~------~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~--------~~~~~~~~~~~~~ 119 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPA------GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN--------TVAGTVKTGKSPL 119 (391)
T ss_dssp TEEEEEETTTTEEEEEEEC------SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT--------EEEEEEECSSSEE
T ss_pred CeEEEEECCCCeEEEEEEC------CCCccceEECCCCCEEEEEECCCCEEEEEECCCC--------eEEEEEeCCCCcc
Confidence 3445566667777777764 2489999999999976 45557799999998775 2344555567899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEE-EecCccc
Q 004998 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIF-RYGMFQE 714 (720)
Q Consensus 661 ~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~-~~~~~~~ 714 (720)
+++|+|+++.++++++.|++|++||+.+++.+.. +.+++|++.+..+ ..++-|.
T Consensus 120 ~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~ 180 (391)
T 1l0q_A 120 GLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSM 180 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTT
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCC
Confidence 9999997654447899999999999999998876 6799999999765 6666553
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=98.86 E-value=1.1e-08 Score=112.43 Aligned_cols=100 Identities=9% Similarity=-0.089 Sum_probs=80.0
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCC---cEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEE-EEeCCCc
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNK---KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA-SSNFEGV 680 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~la-S~s~D~~ 680 (720)
+|...|.+++|+|||++||+++.|+ +|++||+.++. +.....+...+.+++|+|+++ .|| +++.|+.
T Consensus 176 ~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~--------~~~l~~~~~~~~~~~~spdg~-~la~~~~~~g~ 246 (415)
T 2hqs_A 176 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA--------VRQVASFPRHNGAPAFSPDGS-KLAFALSKTGS 246 (415)
T ss_dssp EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--------EEEEECCSSCEEEEEECTTSS-EEEEEECTTSS
T ss_pred CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc--------EEEeecCCCcccCEEEcCCCC-EEEEEEecCCC
Confidence 3478899999999999999999886 99999988752 222334466899999999765 566 7777765
Q ss_pred --EEEEECCCCcEEEE------EEEEeecCCceEEEecCcc
Q 004998 681 --VQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 681 --v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~~ 713 (720)
|.+||+.+++.... +.+++|+|.+..+.+++-+
T Consensus 247 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~ 287 (415)
T 2hqs_A 247 LNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQ 287 (415)
T ss_dssp CEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECT
T ss_pred ceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECC
Confidence 99999999886432 8899999999988887753
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=98.72 E-value=5.4e-08 Score=106.09 Aligned_cols=115 Identities=10% Similarity=-0.018 Sum_probs=88.6
Q ss_pred hhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee--------CCCcEEEeeCCcccccccccccceEEecCC
Q 004998 585 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG--------VNKKIKVFECDAIINENRDIHYPVVEMASR 656 (720)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~--------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 656 (720)
..+...+.+++..+.. ...+.+++|+|||++|++++ .|++|++||+.+. ..+..+.+.
T Consensus 237 ~~~d~~~~~~~~~~~~------~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~--------~~~~~~~~~ 302 (433)
T 3bws_A 237 SVIDRKTKLEIRKTDK------IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE--------KLIDTIGPP 302 (433)
T ss_dssp EEEETTTTEEEEECCC------CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT--------EEEEEEEEE
T ss_pred EEEECCCCcEEEEecC------CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC--------cEEeeccCC
Confidence 4444455566666653 24599999999999999988 4899999998765 233344444
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCcc
Q 004998 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 657 ~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~~ 713 (720)
..+.+++|+|+++.++++++.|++|++||+.+++.+.. +.+++|++.+..+..++.+
T Consensus 303 ~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 365 (433)
T 3bws_A 303 GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRG 365 (433)
T ss_dssp ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECC
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecC
Confidence 57899999998766778889999999999999988776 7899999999866665543
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=98.54 E-value=3.3e-07 Score=100.55 Aligned_cols=101 Identities=12% Similarity=-0.065 Sum_probs=75.2
Q ss_pred CCCCCCeEEEEECCCCCEEE-EeeCCCc--EEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeC-CC
Q 004998 604 LNSSNLVCSLSFDRDGELFA-AAGVNKK--IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF-EG 679 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~la-t~~~d~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~-D~ 679 (720)
.+|...|.+++|+|||++|| +++.|+. |++||+.+.. +.....+...+.+++|+|++ .+||+++. |+
T Consensus 219 ~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~--------~~~l~~~~~~~~~~~~spdg-~~l~~~s~~~g 289 (415)
T 2hqs_A 219 ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ--------IRQVTDGRSNNTEPTWFPDS-QNLAFTSDQAG 289 (415)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--------EEECCCCSSCEEEEEECTTS-SEEEEEECTTS
T ss_pred ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC--------EEeCcCCCCcccceEECCCC-CEEEEEECCCC
Confidence 34567899999999999888 7766655 9999987651 11222345679999999975 56776665 56
Q ss_pred --cEEEEECCCCcEEE------EEEEEeecCCceEEEecCcc
Q 004998 680 --VVQVGQVLHLIYFS------ALYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 680 --~v~lWDv~tg~~~~------~v~~v~~~~~~~~~~~~~~~ 713 (720)
.|.+||+.+++... .+.+++|+|.+..+.+++.+
T Consensus 290 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~ 331 (415)
T 2hqs_A 290 RPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSN 331 (415)
T ss_dssp SCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEEC
T ss_pred CcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECc
Confidence 56667999887543 17899999999999888765
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=1.3e-06 Score=99.57 Aligned_cols=96 Identities=8% Similarity=0.030 Sum_probs=75.8
Q ss_pred hhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeC--CcccccccccccceEEecCCCCEEEE
Q 004998 585 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFEC--DAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~i~~v 662 (720)
..+.-.+.+++.++.. ++. +.+++|+|||++|++++.|++|++||+ .+. ..+..+.+......|
T Consensus 162 ~v~D~~t~~~~~~i~~----g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~--------~~~~~i~~g~~p~~v 227 (543)
T 1nir_A 162 ALVDGDSKKIVKVIDT----GYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEP--------TKVAEIKIGIEARSV 227 (543)
T ss_dssp EEEETTTCCEEEEEEC----STT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSC--------EEEEEEECCSEEEEE
T ss_pred EEEECCCceEEEEEec----Ccc--cceEEECCCCCEEEEECCCCeEEEEECcCCCC--------cEEEEEecCCCcceE
Confidence 4445566777777763 122 899999999999999999999999998 554 244555556678999
Q ss_pred EEec----CCCCEEEEEeC-CCcEEEEECCCCcEEEEE
Q 004998 663 CWNS----YIKSQIASSNF-EGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 663 ~~~~----~~~~~laS~s~-D~~v~lWDv~tg~~~~~v 695 (720)
+|+| ++ .+|+++++ |++|+|||..|+++++++
T Consensus 228 a~sp~~~~dg-~~l~v~~~~~~~v~v~D~~t~~~~~~i 264 (543)
T 1nir_A 228 ESSKFKGYED-RYTIAGAYWPPQFAIMDGETLEPKQIV 264 (543)
T ss_dssp EECCSTTCTT-TEEEEEEEESSEEEEEETTTCCEEEEE
T ss_pred EeCCCcCCCC-CEEEEEEccCCeEEEEeccccccceee
Confidence 9999 65 58888885 899999999999988764
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=9.4e-07 Score=108.51 Aligned_cols=101 Identities=15% Similarity=0.105 Sum_probs=80.1
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCC--
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEG-- 679 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~-- 679 (720)
+.+|...|.+++|+|||++||+++.+++|++||+.++. ..... .+...|.+++|+|++ .+||+++.++
T Consensus 374 l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~--------~~~~~~~~~~~v~~~~~SpDG-~~la~~~~~~~~ 444 (1045)
T 1k32_A 374 FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK--------PTVIERSREAMITDFTISDNS-RFIAYGFPLKHG 444 (1045)
T ss_dssp CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------EEEEEECSSSCCCCEEECTTS-CEEEEEEEECSS
T ss_pred ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCc--------eEEeccCCCCCccceEECCCC-CeEEEEecCccc
Confidence 34667889999999999999999999999999987752 22222 356678999999965 5788777654
Q ss_pred --------cEEEEECCCCcEEEE------EEEEeecCCceEEEecCc
Q 004998 680 --------VVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 680 --------~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~ 712 (720)
+|++||+.+|+.... +.+++|++.+..+.+++-
T Consensus 445 ~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 445 ETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp TTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEES
T ss_pred cccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEec
Confidence 999999999883321 788999999998877664
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=98.39 E-value=7.8e-07 Score=92.89 Aligned_cols=107 Identities=10% Similarity=-0.013 Sum_probs=75.0
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCC-CcEEEeeCC--cccccccccccceEEecCCCCEEEEEEecC
Q 004998 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVN-KKIKVFECD--AIINENRDIHYPVVEMASRSKLSSICWNSY 667 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d-~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 667 (720)
+++++..+.+ ...+.+++|+|||++|++++.+ ++|++||+. +.. ...+..+.....+.+++|+|+
T Consensus 27 ~~~~~~~~~~------~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~s~d 94 (343)
T 1ri6_A 27 ALTLTQVVDV------PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA------LTFAAESALPGSLTHISTDHQ 94 (343)
T ss_dssp CEEEEEEEEC------SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC------EEEEEEEECSSCCSEEEECTT
T ss_pred cEEEeeeEec------CCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc------eeeccccccCCCCcEEEEcCC
Confidence 3455555544 5678899999999998888876 999999986 221 013334444447899999997
Q ss_pred CCCEEEEEe-CCCcEEEEEC---CCCcEEEE------EEEEeecCCceEEEec
Q 004998 668 IKSQIASSN-FEGVVQVGQV---LHLIYFSA------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 668 ~~~~laS~s-~D~~v~lWDv---~tg~~~~~------v~~v~~~~~~~~~~~~ 710 (720)
+. +|+.++ .|++|.+||+ .+++.+.. +.+++|+|.+..+..+
T Consensus 95 g~-~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 146 (343)
T 1ri6_A 95 GQ-FVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVP 146 (343)
T ss_dssp SS-EEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEE
T ss_pred CC-EEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEe
Confidence 54 565555 5899999999 44444444 6788999998755443
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.37 E-value=1.9e-06 Score=87.31 Aligned_cols=99 Identities=9% Similarity=-0.029 Sum_probs=73.2
Q ss_pred CCeEEEEECCCCCEEE-EeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEE-EEeCCCcEEEEE
Q 004998 608 NLVCSLSFDRDGELFA-AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA-SSNFEGVVQVGQ 685 (720)
Q Consensus 608 ~~V~sv~f~~dg~~la-t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~la-S~s~D~~v~lWD 685 (720)
..+.+++|+|||++|+ +++.|++++||++..... .......+...+.+++|+|++. .|+ +++.|+.++||+
T Consensus 129 ~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~i~~ 201 (297)
T 2ojh_A 129 LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG------VETRLTHGEGRNDGPDYSPDGR-WIYFNSSRTGQMQIWR 201 (297)
T ss_dssp SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC------CEEECCCSSSCEEEEEECTTSS-EEEEEECTTSSCEEEE
T ss_pred CCccceEECCCCCEEEEEECCCCceEEEEEECCCC------cceEcccCCCccccceECCCCC-EEEEEecCCCCccEEE
Confidence 3489999999999877 888999999999643211 1112223456799999999765 555 555699999999
Q ss_pred CC-CCcEEEE-------EEEEeecCCceEEEecCcc
Q 004998 686 VL-HLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 686 v~-tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
+. .+..+.. +.+++|+|.+..+.+++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 237 (297)
T 2ojh_A 202 VRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYD 237 (297)
T ss_dssp EETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEE
T ss_pred ECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcC
Confidence 86 4444443 7899999999988888765
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.34 E-value=4.2e-07 Score=106.53 Aligned_cols=96 Identities=11% Similarity=0.148 Sum_probs=75.6
Q ss_pred CeEEEEECCCCCEEEEeeC---------CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC
Q 004998 609 LVCSLSFDRDGELFAAAGV---------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
.|.+++|||||++||+++. |++|+|||+.++.... ...+ ...+.+++|||++ ..||+++ |+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~------~~~l--~~~~~~~~~SPDG-~~la~~~-~~ 130 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVR------GNEL--PRPIQYLCWSPVG-SKLAYVY-QN 130 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC------SSCC--CSSBCCEEECSST-TCEEEEE-TT
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccc------ceec--CcccccceECCCC-CEEEEEE-CC
Confidence 3889999999999999887 7999999987762100 0111 2468899999975 5788876 89
Q ss_pred cEEEEECCCCcEEEE--------E-----------------EEEeecCCceEEEecCccc
Q 004998 680 VVQVGQVLHLIYFSA--------L-----------------YCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~--------v-----------------~~v~~~~~~~~~~~~~~~~ 714 (720)
+|++||+.+|++.+. + .+++|||+|..++++++|+
T Consensus 131 ~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~ 190 (719)
T 1z68_A 131 NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFND 190 (719)
T ss_dssp EEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEEC
T ss_pred eEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECC
Confidence 999999999886542 2 3899999999999999873
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=98.34 E-value=8.9e-07 Score=89.80 Aligned_cols=104 Identities=9% Similarity=-0.070 Sum_probs=77.1
Q ss_pred CCCCCCCeEEEEECCCCCEEEEee-CCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCC--
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFE-- 678 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D-- 678 (720)
+..+...+.+++|+|||++|+.++ .|+.++||++.... ..+..+. +...+.+++|+|++ .+||.++.|
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~-------~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~ 239 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDG-------SSVERITDSAYGDWFPHPSPSG-DKVVFVSYDAD 239 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-------SCEEECCCCSEEEEEEEECTTS-SEEEEEEEETT
T ss_pred cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCC-------CCcEEEecCCcccCCeEECCCC-CEEEEEEcCCC
Confidence 345578899999999999887666 59999999975321 1222332 34568999999965 577777765
Q ss_pred ---------CcEEEEECCCCcE--EEE-------EEEEeecCCceEEEecCccc
Q 004998 679 ---------GVVQVGQVLHLIY--FSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 679 ---------~~v~lWDv~tg~~--~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+.|.+||+.+++. +.. +.+++|+|.+..+.+++.+.
T Consensus 240 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 240 VFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999998865 332 56789999999988887664
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=98.33 E-value=1.3e-06 Score=102.59 Aligned_cols=108 Identities=7% Similarity=-0.038 Sum_probs=76.7
Q ss_pred CCCeEEEEECCCCCEEEEeeC-CC-----cEEEeeCCcccccc-cccc--cc-----------eE---EecCCCCEEEEE
Q 004998 607 SNLVCSLSFDRDGELFAAAGV-NK-----KIKVFECDAIINEN-RDIH--YP-----------VV---EMASRSKLSSIC 663 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~-d~-----~i~iwd~~~~~~~~-~~~~--~~-----------~~---~~~~~~~i~~v~ 663 (720)
...|.+++|+|||++||+++. |+ +|++||+.++.... ...+ .| .. .+.+...|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 467899999999999999998 88 99999987752110 0000 00 00 000002378999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCC---cEEE------EEEEEeecCCceEEEecCccceE
Q 004998 664 WNSYIKSQIASSNFEGVVQVGQVLHL---IYFS------ALYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 664 ~~~~~~~~laS~s~D~~v~lWDv~tg---~~~~------~v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|||++ .+||+++. ++|.+||+.+| +... .+.+++|||++..+++++-+.+.
T Consensus 116 ~SpDg-~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~ 175 (741)
T 2ecf_A 116 WSPDA-QRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLW 175 (741)
T ss_dssp ECTTS-SEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEE
T ss_pred ECCCC-CEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEE
Confidence 99965 58888875 99999999998 4332 18899999999999888755443
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=98.31 E-value=3.5e-07 Score=93.52 Aligned_cols=95 Identities=12% Similarity=-0.025 Sum_probs=71.1
Q ss_pred eeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH--
Q 004998 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-- 139 (720)
Q Consensus 64 ~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-- 139 (720)
..+|..+|..+. |..+.++++ +.... ...|+|||| .|.+|.+.+. +......++.+++.+|..||+
T Consensus 56 ~~~E~~~l~~l~~~~~vP~v~~-~~~~~---~~~~lv~e~i~G~~l~~~~~------~~~~~~~~~~~l~~~l~~LH~~~ 125 (263)
T 3tm0_A 56 VEREKDMMLWLEGKLPVPKVLH-FERHD---GWSNLLMSEADGVLCSEEYE------DEQSPEKIIELYAECIRLFHSID 125 (263)
T ss_dssp HHHHHHHHHHHTTTSCCCCEEE-EEEET---TEEEEEEECCSSEEHHHHCC------TTTCHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHhcCCCCCeEEE-EEecC---CceEEEEEecCCeehhhccC------CcccHHHHHHHHHHHHHHHhCCC
Confidence 445666776653 566777887 44333 357999999 9999988641 122345788999999999998
Q ss_pred ---------------------------------------------------------cCceeccCCCCcEEEccCCceEE
Q 004998 140 ---------------------------------------------------------QGIVVHNVRPSCFVMSSFNHVSF 162 (720)
Q Consensus 140 ---------------------------------------------------------~gIvHrDLKP~NILl~~~~~vkl 162 (720)
.+++|+|++|.|||++..+.+.|
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~l 205 (263)
T 3tm0_A 126 ISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGF 205 (263)
T ss_dssp CTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEE
T ss_pred cccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEE
Confidence 55899999999999976555679
Q ss_pred eccCcc
Q 004998 163 IESASC 168 (720)
Q Consensus 163 iDfg~a 168 (720)
+||+.+
T Consensus 206 IDwe~a 211 (263)
T 3tm0_A 206 IDLGRS 211 (263)
T ss_dssp CCCTTC
T ss_pred EEchhc
Confidence 999876
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=98.26 E-value=4.3e-06 Score=87.17 Aligned_cols=110 Identities=9% Similarity=-0.047 Sum_probs=75.3
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee-CCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC
Q 004998 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~ 669 (720)
+++.+..+.. ...+.+++|+|||++|++++ .+++|.+||+.... ...++..+.....+.+++|+|+++
T Consensus 73 ~~~~~~~~~~------~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~-----~~~~~~~~~~~~~~~~~~~s~dg~ 141 (343)
T 1ri6_A 73 ALTFAAESAL------PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGL-----PVGVVDVVEGLDGCHSANISPDNR 141 (343)
T ss_dssp CEEEEEEEEC------SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTE-----EEEEEEEECCCTTBCCCEECTTSS
T ss_pred ceeecccccc------CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCc-----cccccccccCCCCceEEEECCCCC
Confidence 4555555543 23678999999999776655 48999999984110 012344445556799999999754
Q ss_pred CEEEEEe-CCCcEEEEECCC-CcEEE------------EEEEEeecCCceEE-EecCc
Q 004998 670 SQIASSN-FEGVVQVGQVLH-LIYFS------------ALYCIVLNKLLIIF-RYGMF 712 (720)
Q Consensus 670 ~~laS~s-~D~~v~lWDv~t-g~~~~------------~v~~v~~~~~~~~~-~~~~~ 712 (720)
+|++++ .|+.|.+||+.+ |+... .+.+++|+|.+..+ ..+..
T Consensus 142 -~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~ 198 (343)
T 1ri6_A 142 -TLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL 198 (343)
T ss_dssp -EEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT
T ss_pred -EEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC
Confidence 666666 899999999988 65421 15678999999743 44433
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=98.26 E-value=9.4e-07 Score=100.95 Aligned_cols=98 Identities=11% Similarity=-0.090 Sum_probs=75.4
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCC--cEEEeeCCcccccccccccceEEec-CCCCEEEEE--------EecCCCCE
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEMA-SRSKLSSIC--------WNSYIKSQ 671 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~--------~~~~~~~~ 671 (720)
+.+|.+.+.+++|+|||++||+++.++ +|++||+.+.. +. .+. +...+..++ |+|++ .+
T Consensus 190 l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~ 259 (582)
T 3o4h_A 190 FDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS--------VE-DLELPSKDFSSYRPTAITWLGYLPDG-RL 259 (582)
T ss_dssp ECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC--------EE-ECCCSCSHHHHHCCSEEEEEEECTTS-CE
T ss_pred eecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc--------EE-EccCCCcChhhhhhccccceeEcCCC-cE
Confidence 345678899999999999999988898 99999987652 11 111 233455555 99987 79
Q ss_pred EEEEeCCCcEEEEECCCCcEEEE----EEEEeecCCceEEEecCcc
Q 004998 672 IASSNFEGVVQVGQVLHLIYFSA----LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 672 laS~s~D~~v~lWDv~tg~~~~~----v~~v~~~~~~~~~~~~~~~ 713 (720)
+++++.|++++||++ |+.+.+ +.+++|+ .+..+.+++-+
T Consensus 260 ~~~~~~~g~~~l~~~--g~~~~~~~~~v~~~~~s-dg~~l~~~s~~ 302 (582)
T 3o4h_A 260 AVVARREGRSAVFID--GERVEAPQGNHGRVVLW-RGKLVTSHTSL 302 (582)
T ss_dssp EEEEEETTEEEEEET--TEEECCCSSEEEEEEEE-TTEEEEEEEET
T ss_pred EEEEEcCCcEEEEEE--CCeeccCCCceEEEEec-CCEEEEEEcCC
Confidence 999999999999999 776633 8899999 77777665543
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=98.25 E-value=1e-05 Score=85.41 Aligned_cols=99 Identities=12% Similarity=-0.069 Sum_probs=70.3
Q ss_pred CCCeEEEEECCCCCEEEEee-CCCcEEEeeCCcccccccccccceEEecC----------CCCEEEEEEecCCCCEEEEE
Q 004998 607 SNLVCSLSFDRDGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMAS----------RSKLSSICWNSYIKSQIASS 675 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~----------~~~i~~v~~~~~~~~~laS~ 675 (720)
...+..|+|+|||++|++++ .+++|++||+...- . . .++..+.. ...+.+++|+|+++ ++++.
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g-~---~-~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~ 158 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADG-A---L-TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVID 158 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTS-C---E-EEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEE
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCC-C---e-eecceeecCCCCCCccccCCCceEEEECCCCc-EEEEe
Confidence 56789999999999888887 78999999985310 0 0 12222211 23488999999876 77777
Q ss_pred eCCCcEEEEECC-CCcEEEE----------EEEEeecCCce-EEEecC
Q 004998 676 NFEGVVQVGQVL-HLIYFSA----------LYCIVLNKLLI-IFRYGM 711 (720)
Q Consensus 676 s~D~~v~lWDv~-tg~~~~~----------v~~v~~~~~~~-~~~~~~ 711 (720)
..++.|.+||+. +|+.... ...++|+|.+. ++..+.
T Consensus 159 ~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~ 206 (347)
T 3hfq_A 159 LGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGE 206 (347)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred CCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeC
Confidence 778999999998 6653321 45689999998 444443
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=98.25 E-value=1.1e-06 Score=100.50 Aligned_cols=94 Identities=10% Similarity=-0.142 Sum_probs=74.6
Q ss_pred EEEEECCCCCEEEEeeCC----CcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC--cEEEE
Q 004998 611 CSLSFDRDGELFAAAGVN----KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG--VVQVG 684 (720)
Q Consensus 611 ~sv~f~~dg~~lat~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~--~v~lW 684 (720)
.+++|||||++||+++.| .+|++||+.++. ......+...+..++|||++ ..||+++.|+ .|.+|
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~--------~~~l~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~i~~~ 223 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG--------LRVFDSGEGSFSSASISPGM-KVTAGLETAREARLVTV 223 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC--------CEEECCSSCEEEEEEECTTS-CEEEEEECSSCEEEEEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC--------ceEeecCCCccccceECCCC-CEEEEccCCCeeEEEEE
Confidence 799999999999998888 889999987652 12222346678999999965 5888888899 99999
Q ss_pred ECCCCcEEEE-------EEEEe--------ecCCceEEEecCccc
Q 004998 685 QVLHLIYFSA-------LYCIV--------LNKLLIIFRYGMFQE 714 (720)
Q Consensus 685 Dv~tg~~~~~-------v~~v~--------~~~~~~~~~~~~~~~ 714 (720)
|+.+|+.. . +.+++ |+|++.++.+++-|.
T Consensus 224 d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g 267 (582)
T 3o4h_A 224 DPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREG 267 (582)
T ss_dssp CTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETT
T ss_pred cCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCC
Confidence 99999876 4 44566 999997777766554
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=98.23 E-value=1.4e-06 Score=101.77 Aligned_cols=98 Identities=8% Similarity=-0.105 Sum_probs=75.2
Q ss_pred CeEEEEECCCCCEEEEeeCC---------CcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCC
Q 004998 609 LVCSLSFDRDGELFAAAGVN---------KKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d---------~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D 678 (720)
.|.+++|||||++||+++.+ ++|.|||+.+.... ++... .+...+.+++|||++ ..||+++.
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~------~l~~~~~~~~~~~~~~~SPdG-~~la~~~~- 133 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ------SLDPPEVSNAKLQYAGWGPKG-QQLIFIFE- 133 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE------ECCCTTCCSCCCSBCCBCSST-TCEEEEET-
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceE------eccCCccccccccccEECCCC-CEEEEEEC-
Confidence 58999999999999999875 67889998775210 11111 123348899999965 57888875
Q ss_pred CcEEEEECCCCcEEEE-------E------------------EEEeecCCceEEEecCccc
Q 004998 679 GVVQVGQVLHLIYFSA-------L------------------YCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 679 ~~v~lWDv~tg~~~~~-------v------------------~~v~~~~~~~~~~~~~~~~ 714 (720)
+.|.+||+.+|+..+. + .+++|||++..+++++.|+
T Consensus 134 ~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~ 194 (723)
T 1xfd_A 134 NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND 194 (723)
T ss_dssp TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC
T ss_pred CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECC
Confidence 8999999999877653 2 5799999999999998774
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=3.2e-06 Score=96.28 Aligned_cols=89 Identities=7% Similarity=-0.071 Sum_probs=74.0
Q ss_pred ECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC--CCCcEE
Q 004998 615 FDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV--LHLIYF 692 (720)
Q Consensus 615 f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv--~tg~~~ 692 (720)
|+|+|.++++++.|++|.|||..+. ..+..+.....+.+++|+|++ .+|++++.|++|++||+ .+++++
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~--------~~~~~i~~g~~~~~v~~spdg-~~l~v~~~d~~V~v~D~~~~t~~~~ 215 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSK--------KIVKVIDTGYAVHISRMSASG-RYLLVIGRDARIDMIDLWAKEPTKV 215 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTC--------CEEEEEECSTTEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCEEE
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCc--------eEEEEEecCcccceEEECCCC-CEEEEECCCCeEEEEECcCCCCcEE
Confidence 8999999999999999999998776 234455432338999999964 69999999999999999 899988
Q ss_pred EE------EEEEeecC----CceEEEecCc
Q 004998 693 SA------LYCIVLNK----LLIIFRYGMF 712 (720)
Q Consensus 693 ~~------v~~v~~~~----~~~~~~~~~~ 712 (720)
.+ ..+++|+| .+..+..+++
T Consensus 216 ~~i~~g~~p~~va~sp~~~~dg~~l~v~~~ 245 (543)
T 1nir_A 216 AEIKIGIEARSVESSKFKGYEDRYTIAGAY 245 (543)
T ss_dssp EEEECCSEEEEEEECCSTTCTTTEEEEEEE
T ss_pred EEEecCCCcceEEeCCCcCCCCCEEEEEEc
Confidence 87 57999999 8887766654
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=98.21 E-value=6.6e-07 Score=104.63 Aligned_cols=98 Identities=8% Similarity=-0.055 Sum_probs=74.7
Q ss_pred CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC----CEEEEEEecCCCCEEEEEeCC------
Q 004998 609 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS----KLSSICWNSYIKSQIASSNFE------ 678 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~----~i~~v~~~~~~~~~laS~s~D------ 678 (720)
.+.+++|+|||+++++ +.|++|++||..++. ....+.++. .|.+++|||++ .+||+++.|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~--------~~~~~~~~~~~~~~v~~~~~SpDg-~~l~~~~~~~~~~~~ 87 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNT--------STVLIEGKKIESLRAIRYEISPDR-EYALFSYNVEPIYQH 87 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCC--------CEEEECTTTTTTTTCSEEEECTTS-SEEEEEESCCCCSSS
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCc--------EEEEeccccccccccceEEECCCC-CEEEEEecCccceee
Confidence 4678999999998877 789999999987762 223333322 49999999965 588888764
Q ss_pred ---CcEEEEECCCCcEEE--E-------EEEEeecCCceEEEecCccceE
Q 004998 679 ---GVVQVGQVLHLIYFS--A-------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 679 ---~~v~lWDv~tg~~~~--~-------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+.|.|||+.+|++.. . +.+++|||++..+++++-..+.
T Consensus 88 ~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~ 137 (723)
T 1xfd_A 88 SYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIY 137 (723)
T ss_dssp CCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEE
T ss_pred cceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEECCeEE
Confidence 778899999998622 1 5679999999999888765443
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=98.20 E-value=1.1e-05 Score=84.12 Aligned_cols=112 Identities=11% Similarity=0.023 Sum_probs=76.7
Q ss_pred ccccceEEeeeeccCCCCCCCCCeEEEEECCCCCE-EEEeeCCCc-EEEeeCCcccccccccccceEEecCCCCEEEEEE
Q 004998 587 LSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGEL-FAAAGVNKK-IKVFECDAIINENRDIHYPVVEMASRSKLSSICW 664 (720)
Q Consensus 587 ~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~-lat~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~ 664 (720)
+...+.+++..+.. ...+.+++|+|||++ ++++..+++ |.+||+...- ...+.. ...+.......+++|
T Consensus 113 ~d~~~~~~~~~~~~------~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g-~~~~~~--~~~~~~~~~~~~~~~ 183 (331)
T 3u4y_A 113 YSFLKNKFISTIPI------PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADG-VLFDTG--QEFISGGTRPFNITF 183 (331)
T ss_dssp EETTTTEEEEEEEC------CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTC-CEEEEE--EEEECSSSSEEEEEE
T ss_pred EECCCCCeEEEEEC------CCCccceEECCCCCEEEEEecCCCceEEEEEECCCC-cEeecC--CccccCCCCccceEE
Confidence 33444555555543 345689999999985 555566688 9999986421 001110 122334456899999
Q ss_pred ecCCCCEEEEEeCCCcEEEEECCCCcE---EEE------EEEEeecCCceEE
Q 004998 665 NSYIKSQIASSNFEGVVQVGQVLHLIY---FSA------LYCIVLNKLLIIF 707 (720)
Q Consensus 665 ~~~~~~~laS~s~D~~v~lWDv~tg~~---~~~------v~~v~~~~~~~~~ 707 (720)
+|+++.+++++..+++|.+||+.+++. +.+ +.+++|+|.+..+
T Consensus 184 spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 235 (331)
T 3u4y_A 184 TPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTV 235 (331)
T ss_dssp CTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEE
T ss_pred CCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEE
Confidence 997654566666799999999999998 665 4678999999843
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=98.18 E-value=2.8e-06 Score=99.65 Aligned_cols=99 Identities=4% Similarity=-0.147 Sum_probs=76.1
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004998 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~ 687 (720)
..|.+++|+|||++||+++. ++|++||+.+.... .......+...+.+++|||++ .+||+++ ++.|.+||+.
T Consensus 109 ~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~-----~~~~l~~~~~~~~~~~~SPDG-~~la~~~-~~~i~~~d~~ 180 (741)
T 2ecf_A 109 TGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKA-----AVRQLTHGEGFATDAKLSPKG-GFVSFIR-GRNLWVIDLA 180 (741)
T ss_dssp EESCCCEECTTSSEEEEEET-TEEEEEESSSCSTT-----SCCBCCCSSSCEEEEEECTTS-SEEEEEE-TTEEEEEETT
T ss_pred cCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcc-----eEEEcccCCcccccccCCCCC-CEEEEEe-CCcEEEEecC
Confidence 34789999999999999886 99999998765100 011112235679999999965 5888887 5799999999
Q ss_pred CCcEEEE-----------------------EEEEeecCCceEEEecCccc
Q 004998 688 HLIYFSA-----------------------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 688 tg~~~~~-----------------------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+|+.... +.+++|||++..+.+++.|.
T Consensus 181 ~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 181 SGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp TTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred CCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 9877653 26789999999999988774
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=1.9e-06 Score=100.67 Aligned_cols=106 Identities=12% Similarity=-0.037 Sum_probs=73.8
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCc-----ccccc-cccc-cceEE-----ecCCCCEEEEEEecCCCCEEE
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDA-----IINEN-RDIH-YPVVE-----MASRSKLSSICWNSYIKSQIA 673 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~-----~~~~~-~~~~-~~~~~-----~~~~~~i~~v~~~~~~~~~la 673 (720)
+...|.+++|+|||++||++ .|+.|+|||+.+ ..... ...+ ..+.. -.....+.+++|||++ .+||
T Consensus 119 ~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg-~~la 196 (706)
T 2z3z_A 119 TNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG-SCLA 196 (706)
T ss_dssp CTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS-SEEE
T ss_pred CcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC-CEEE
Confidence 45678899999999999995 689999999876 41110 0000 00000 0001125899999965 5888
Q ss_pred EEe---------------------------------CCCcEEEEECCCCcEEEE---------EEEEeecCCceEEEecC
Q 004998 674 SSN---------------------------------FEGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 674 S~s---------------------------------~D~~v~lWDv~tg~~~~~---------v~~v~~~~~~~~~~~~~ 711 (720)
+++ .+..|.+||+.+|+.... +.+++|+|++..+.+++
T Consensus 197 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 276 (706)
T 2z3z_A 197 FYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAE 276 (706)
T ss_dssp EEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEE
Confidence 887 346799999999986432 78999999999888876
Q ss_pred cc
Q 004998 712 FQ 713 (720)
Q Consensus 712 ~~ 713 (720)
.+
T Consensus 277 ~~ 278 (706)
T 2z3z_A 277 VN 278 (706)
T ss_dssp EC
T ss_pred eC
Confidence 65
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.17 E-value=7.9e-07 Score=104.16 Aligned_cols=96 Identities=5% Similarity=0.018 Sum_probs=73.0
Q ss_pred EEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC----CEEEEEEecCCCCEEEEEeC---------
Q 004998 611 CSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS----KLSSICWNSYIKSQIASSNF--------- 677 (720)
Q Consensus 611 ~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~----~i~~v~~~~~~~~~laS~s~--------- 677 (720)
.+++|+|||++++++ .|++|++||..++. +...+.++. .|.+++|||++ ++||+++.
T Consensus 19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~--------~~~~~~~~~~~~~~~~~~~~SpDg-~~la~~~~~~~~~~~s~ 88 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADNNIVLYNIETGQ--------SYTILSNRTMKSVNASNYGLSPDR-QFVYLESDYSKLWRYSY 88 (719)
T ss_dssp CCCEESSSSEEEEEC-TTSCEEEEESSSCC--------EEEEECHHHHHTTTCSEEEECTTS-SEEEEEEEEEECSSSCE
T ss_pred CccEECCCCeEEEEc-CCCCEEEEEcCCCc--------EEEEEccccccccceeeEEECCCC-CeEEEEecCceeEEeec
Confidence 378999999877776 59999999987762 222332222 38999999965 58888775
Q ss_pred CCcEEEEECCCCcEE---E---EEEEEeecCCceEEEecCccceE
Q 004998 678 EGVVQVGQVLHLIYF---S---ALYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 678 D~~v~lWDv~tg~~~---~---~v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|++|++||+.+|+.+ . .+.+++|||+|..+++++-..+.
T Consensus 89 ~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~ 133 (719)
T 1z68_A 89 TATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIY 133 (719)
T ss_dssp EEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEETTEEE
T ss_pred ceEEEEEECCCCccccceecCcccccceECCCCCEEEEEECCeEE
Confidence 799999999999873 2 17889999999999988644443
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=98.16 E-value=7.2e-06 Score=85.24 Aligned_cols=78 Identities=9% Similarity=-0.039 Sum_probs=63.5
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv 686 (720)
...+.+++|+|||++++++ +++|.+||+.+. ..+..+.....+.+++|+|++ ++|++++.|+.|++||+
T Consensus 240 ~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 240 DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN--------ASIKRVPLPHSYYSVNVSTDG-STVWLGGALGDLAAYDA 308 (337)
T ss_dssp SSCEEEEEECTTSSEEEEE--ESEEEEEETTTT--------EEEEEEECSSCCCEEEECTTS-CEEEEESBSSEEEEEET
T ss_pred CCceeeEEECCCCCEEEEe--CCeEEEEECCCC--------cCcceecCCCceeeEEECCCC-CEEEEEcCCCcEEEEEC
Confidence 4678899999999998888 799999998765 233344444568899999965 57888888999999999
Q ss_pred CCCcEEEEE
Q 004998 687 LHLIYFSAL 695 (720)
Q Consensus 687 ~tg~~~~~v 695 (720)
.+++.+.++
T Consensus 309 ~~~~~~~~~ 317 (337)
T 1pby_B 309 ETLEKKGQV 317 (337)
T ss_dssp TTCCEEEEE
T ss_pred cCCcEEEEE
Confidence 999988764
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=1.3e-05 Score=84.00 Aligned_cols=106 Identities=9% Similarity=0.016 Sum_probs=74.3
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEe-eCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC
Q 004998 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAA-GVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~ 669 (720)
+.+++..+..+. .++...+.+++|+|||++++.+ ..++.|.+||..+.. .+..+.... -.+++|+|+++
T Consensus 215 ~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~--------~~~~~~~~~-~~~~~~s~dg~ 284 (353)
T 3vgz_A 215 DNKILSRKKLLD-DGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN--------ILAKVAAPE-SLAVLFNPARN 284 (353)
T ss_dssp TTEEEEEEECCC-SSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC--------EEEEEECSS-CCCEEEETTTT
T ss_pred CCeEEEEEEcCC-CCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc--------EEEEEEcCC-CceEEECCCCC
Confidence 444554444211 2345678999999999965544 456999999987651 222222222 25799999766
Q ss_pred CEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceE
Q 004998 670 SQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLII 706 (720)
Q Consensus 670 ~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~ 706 (720)
.++++...|++|.+||+.+++.+.. .++++|++.+..
T Consensus 285 ~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~ 327 (353)
T 3vgz_A 285 EAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKT 327 (353)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCE
T ss_pred EEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCE
Confidence 4566666799999999999998876 689999999973
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.15 E-value=2e-06 Score=92.34 Aligned_cols=103 Identities=13% Similarity=0.151 Sum_probs=76.7
Q ss_pred eeeehhhhcccCC--CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~--HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|..+. +..+.+++. ++.+.......|+|||| .|..|.+.. ...++..+...++.+++..|..||+
T Consensus 82 ~~~~E~~~l~~L~~~~vpvP~~~~-~~~~~~~~g~~~~vme~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~ 157 (359)
T 3dxp_A 82 AIEREYRVMDALAGTDVPVAKMYA-LCEDESVIGRAFYIMEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHT 157 (359)
T ss_dssp CHHHHHHHHHHHTTSSSCCCCEEE-EECCTTTTSSCEEEEECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCCcEEE-ECCCCCccCCeEEEEEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhC
Confidence 3345666777666 345677777 55454433457899999 887764311 2237888899999999999999997
Q ss_pred ----------------------------------------------------------cCceeccCCCCcEEEccCCc--
Q 004998 140 ----------------------------------------------------------QGIVVHNVRPSCFVMSSFNH-- 159 (720)
Q Consensus 140 ----------------------------------------------------------~gIvHrDLKP~NILl~~~~~-- 159 (720)
.+++|+|++|.|||++.++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v 237 (359)
T 3dxp_A 158 VDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRV 237 (359)
T ss_dssp SCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCE
T ss_pred CCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcE
Confidence 36899999999999997653
Q ss_pred eEEeccCccc
Q 004998 160 VSFIESASCS 169 (720)
Q Consensus 160 vkliDfg~a~ 169 (720)
+.++||+.+.
T Consensus 238 ~~viDwe~a~ 247 (359)
T 3dxp_A 238 LAVLDWELST 247 (359)
T ss_dssp EEECCCTTCE
T ss_pred EEEECccccc
Confidence 6899999873
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=98.15 E-value=1.5e-05 Score=83.13 Aligned_cols=112 Identities=11% Similarity=0.021 Sum_probs=74.5
Q ss_pred ccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEe-eCCCcEEEeeCCcccccccccccceEEecC-CCCEEEEEE
Q 004998 587 LSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAA-GVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICW 664 (720)
Q Consensus 587 ~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~ 664 (720)
+...+.+++..+.. +...+ +++|+|||++++++ ..+++|.+||..+.. .....+.. .....+++|
T Consensus 25 ~d~~~~~~~~~~~~-----~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~-------~~~~~~~~~~~~~~~~~~ 91 (331)
T 3u4y_A 25 FSTDTLEILNQITL-----GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEP-------PKVVAIQEGQSSMADVDI 91 (331)
T ss_dssp EETTTCCEEEEEEC-----CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSS-------CEEEEEEECSSCCCCEEE
T ss_pred EeCcccceeeeEEc-----cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCc-------eeEEecccCCCCccceEE
Confidence 33344455555442 13445 99999999965554 448999999987652 11333333 334444999
Q ss_pred ecCCCCEEEEEeCC-C--cEEEEECCCCcEEEE------EEEEeecCCce-EEEecCc
Q 004998 665 NSYIKSQIASSNFE-G--VVQVGQVLHLIYFSA------LYCIVLNKLLI-IFRYGMF 712 (720)
Q Consensus 665 ~~~~~~~laS~s~D-~--~v~lWDv~tg~~~~~------v~~v~~~~~~~-~~~~~~~ 712 (720)
+|++ .+|+++..+ + +|.+||+.+++.+.+ ..+++|+|.+. ++..+..
T Consensus 92 s~dg-~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 148 (331)
T 3u4y_A 92 TPDD-QFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRS 148 (331)
T ss_dssp CTTS-SEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEET
T ss_pred CCCC-CEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecC
Confidence 9965 577754444 2 999999999998876 57899999986 4444443
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=98.14 E-value=5.9e-06 Score=85.92 Aligned_cols=109 Identities=8% Similarity=-0.038 Sum_probs=76.5
Q ss_pred cccceEEeeeeccCCCCCCCC-CeEEEEECCCCCE-EEEeeCCCcEEEeeCCcccccccccccceEEecCC------CCE
Q 004998 588 SFSKLRVKADLNQGDLLNSSN-LVCSLSFDRDGEL-FAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR------SKL 659 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~-~V~sv~f~~dg~~-lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~------~~i 659 (720)
...+.+++..+..+ +.. .+.+++|+|||++ +++++.+++|.+||+.+.. .+..+... ..+
T Consensus 17 d~~~~~~~~~~~~~----~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~--------~~~~~~~~~~~~~~~~~ 84 (337)
T 1pby_B 17 DTEKMAVDKVITIA----DAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE--------TLGRIDLSTPEERVKSL 84 (337)
T ss_dssp ETTTTEEEEEEECT----TCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC--------EEEEEECCBTTEEEECT
T ss_pred ECCCCcEEEEEEcC----CCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC--------eEeeEEcCCcccccccc
Confidence 33455666666531 111 4788999999975 5677778999999987651 22222221 156
Q ss_pred EEEEEecCCCCEEEEEe------------CCCcEEEEECCCCcEEEE------EEEEeecCCceEEEe
Q 004998 660 SSICWNSYIKSQIASSN------------FEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRY 709 (720)
Q Consensus 660 ~~v~~~~~~~~~laS~s------------~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~ 709 (720)
.+++|+|++ .+|+.++ .|+.|.+||+.+++.+.. +.+++|+|.+..+..
T Consensus 85 ~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 151 (337)
T 1pby_B 85 FGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYG 151 (337)
T ss_dssp TCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEE
T ss_pred cceEECCCC-CEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEE
Confidence 789999965 4777775 579999999999988776 467899999875443
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.09 E-value=4.8e-06 Score=97.53 Aligned_cols=102 Identities=10% Similarity=0.019 Sum_probs=75.7
Q ss_pred CCCCCeEEEEECCCCCEEE-----EeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC
Q 004998 605 NSSNLVCSLSFDRDGELFA-----AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG 679 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~la-----t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~ 679 (720)
+|...+.+++|||||++|| +|+.+.+|+|||+.++.....+ .+. ..+...++|+|++ ..|+.+++|.
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~------~~~-~~~~~~~~wspDg-~~l~~~~~d~ 189 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD------VIE-GGKYATPKWTPDS-KGFYYEWLPT 189 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC------CBS-CCTTCCCEECTTS-SEEEEEECCC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc------ccC-cccccceEEecCC-CEEEEEEecC
Confidence 3455789999999999999 6666789999999876311000 111 1223689999965 5889999888
Q ss_pred c-------------EEEEECCCCc----EEEE-------EEEEeecCCceEEEecCccc
Q 004998 680 V-------------VQVGQVLHLI----YFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 680 ~-------------v~lWDv~tg~----~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+ |.+||+.+++ .+.+ +.+++|++++..++..+.+.
T Consensus 190 ~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 248 (695)
T 2bkl_A 190 DPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG 248 (695)
T ss_dssp CTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET
T ss_pred CCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC
Confidence 7 9999999887 4432 67899999998888776543
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=98.07 E-value=3.4e-05 Score=80.87 Aligned_cols=109 Identities=8% Similarity=0.133 Sum_probs=78.1
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-----CCCCEEEEEE
Q 004998 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-----SRSKLSSICW 664 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-----~~~~i~~v~~ 664 (720)
.+.+++..+. .+...+.+++|+|||+++++++.++.|.+||..+.. .+..+. ....+.+++|
T Consensus 172 ~~~~~~~~~~-----~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~--------~~~~~~~~~~~~~~~~~~~~~ 238 (353)
T 3vgz_A 172 GNIKLKTAIQ-----NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNK--------ILSRKKLLDDGKEHFFINISL 238 (353)
T ss_dssp TTTEEEEEEC-----CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTE--------EEEEEECCCSSSCCCEEEEEE
T ss_pred CCCceEEEec-----CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCe--------EEEEEEcCCCCCCcccceEEE
Confidence 3445555554 124557899999999999999999999999987652 122211 2445889999
Q ss_pred ecCCCCEEEEEeCCCcEEEEECCCCcEEEEE-----EEEeecCCce-EEEecC
Q 004998 665 NSYIKSQIASSNFEGVVQVGQVLHLIYFSAL-----YCIVLNKLLI-IFRYGM 711 (720)
Q Consensus 665 ~~~~~~~laS~s~D~~v~lWDv~tg~~~~~v-----~~v~~~~~~~-~~~~~~ 711 (720)
+|+++.+++++..++.|.+||+.+++.+..+ .+++|++.+. +++.+.
T Consensus 239 s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~ 291 (353)
T 3vgz_A 239 DTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHR 291 (353)
T ss_dssp ETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEET
T ss_pred CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEEC
Confidence 9976544445555699999999999988774 4789999887 444443
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=98.06 E-value=5.1e-06 Score=98.02 Aligned_cols=121 Identities=11% Similarity=0.092 Sum_probs=82.6
Q ss_pred hhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCc---------EEEeeCCcccccccccccceEEecC
Q 004998 585 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKK---------IKVFECDAIINENRDIHYPVVEMAS 655 (720)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~---------i~iwd~~~~~~~~~~~~~~~~~~~~ 655 (720)
..+...+-+....+....+........+++|||||++||.++.+++ +.|||+.++... ....+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~--------~l~~~ 110 (740)
T 4a5s_A 39 LVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI--------TEERI 110 (740)
T ss_dssp EEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC--------CSSCC
T ss_pred EEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE--------EcccC
Confidence 3333333343333443233333333456899999999999998754 559999876211 11123
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------EE-----------------EEeecCCceEEEec
Q 004998 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------LY-----------------CIVLNKLLIIFRYG 710 (720)
Q Consensus 656 ~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~--------v~-----------------~v~~~~~~~~~~~~ 710 (720)
...+..++|||++ +.||.++ |+.|.+||+.+|+..+- ++ .+.|||+|..+++.
T Consensus 111 ~~~~~~~~~SPdG-~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~ 188 (740)
T 4a5s_A 111 PNNTQWVTWSPVG-HKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYA 188 (740)
T ss_dssp CTTEEEEEECSST-TCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEE
T ss_pred CCcceeeEECCCC-CEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEE
Confidence 5679999999975 5788875 79999999999886552 21 37899999999999
Q ss_pred Cccce
Q 004998 711 MFQEV 715 (720)
Q Consensus 711 ~~~~~ 715 (720)
++|+-
T Consensus 189 ~~d~~ 193 (740)
T 4a5s_A 189 QFNDT 193 (740)
T ss_dssp EEECT
T ss_pred EEccc
Confidence 88753
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=98.06 E-value=2.8e-05 Score=84.32 Aligned_cols=91 Identities=4% Similarity=-0.037 Sum_probs=70.6
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv 686 (720)
.. |..|+| ||.+|++| .++.|++||+.+..... ..-.+...|.++.|.+. .+|.++.||+|.+||+
T Consensus 88 p~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~-------~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl 153 (388)
T 1xip_A 88 PD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFR-------TVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDL 153 (388)
T ss_dssp TT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEE-------EEEECSSCEEEEEECSS---EEEEEETTSEEEEEET
T ss_pred CC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccC-------ccceeecceeeEEecCC---CEEEEECCCCEEEEEc
Confidence 45 999999 99999998 89999999988764211 11123455888888763 3899999999999999
Q ss_pred CCCcEEEE---EEEEeecCCceEEEecC
Q 004998 687 LHLIYFSA---LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 687 ~tg~~~~~---v~~v~~~~~~~~~~~~~ 711 (720)
.+++.... |.|++|||.|..++.+.
T Consensus 154 ~~~~~~~~~~~Vs~v~WSpkG~~vg~~d 181 (388)
T 1xip_A 154 RTKSTKQLAQNVTSFDVTNSQLAVLLKD 181 (388)
T ss_dssp TTCCEEEEEESEEEEEECSSEEEEEETT
T ss_pred cCCccccccCCceEEEEcCCceEEEEcC
Confidence 98876543 99999999996665543
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=98.03 E-value=6.1e-06 Score=96.29 Aligned_cols=95 Identities=6% Similarity=-0.107 Sum_probs=73.5
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004998 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~ 687 (720)
..|.+++|+|| .+++.+ .|++|+|||+.+.. +.....+...+.+++|||++ +.||++ .|+.|.+||+.
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~--------~~~l~~~~~~~~~~~~SpdG-~~la~~-~~~~i~v~~~~ 149 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARK--------VTYLFDTNEETASLDFSPVG-DRVAYV-RNHNLYIARGG 149 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTE--------EEEEECCTTCCTTCEECTTS-SEEEEE-ETTEEEEEECB
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCc--------eEEccCCcccccCCcCCCCC-CEEEEE-ECCeEEEEecC
Confidence 56999999999 555544 36999999987651 22233345678999999965 588885 68999999999
Q ss_pred C-----CcEEEE-------E--------------EEEeecCCceEEEecCccc
Q 004998 688 H-----LIYFSA-------L--------------YCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 688 t-----g~~~~~-------v--------------~~v~~~~~~~~~~~~~~~~ 714 (720)
+ |+..+. + .+++|||++..++++++|+
T Consensus 150 ~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~ 202 (706)
T 2z3z_A 150 KLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQ 202 (706)
T ss_dssp CTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEEC
T ss_pred cccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECC
Confidence 9 876652 3 6899999999999998763
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=98.03 E-value=1.2e-05 Score=84.13 Aligned_cols=92 Identities=5% Similarity=-0.087 Sum_probs=71.6
Q ss_pred EEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC--CEEEEEEecCCCCEEEEEeCCCcEEEEECCCC
Q 004998 612 SLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS--KLSSICWNSYIKSQIASSNFEGVVQVGQVLHL 689 (720)
Q Consensus 612 sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~--~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg 689 (720)
.++|++++.++++++.+++|++||..+. ..+..+.... .+..++|+|+++..+++++.++.|.+||+.++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~ 75 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASD--------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTC 75 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTT--------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCC--------cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCC
Confidence 3578999999999999999999998765 1333333333 57899999976545667778999999999999
Q ss_pred cEEEEE-------------EEEeecCCceEEEecC
Q 004998 690 IYFSAL-------------YCIVLNKLLIIFRYGM 711 (720)
Q Consensus 690 ~~~~~v-------------~~v~~~~~~~~~~~~~ 711 (720)
+.+..+ .+++|+|.+..+..++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 110 (349)
T 1jmx_B 76 KNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATV 110 (349)
T ss_dssp EEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEE
T ss_pred cEEEEEEcccccccccccccceEECCCCCEEEEEc
Confidence 877653 5679999998776665
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=97.99 E-value=1.6e-05 Score=97.52 Aligned_cols=101 Identities=5% Similarity=-0.113 Sum_probs=80.8
Q ss_pred CCCCCC-CeEEEEECCCCCEEEEeeCCCcEE-EeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 603 LLNSSN-LVCSLSFDRDGELFAAAGVNKKIK-VFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~-~V~sv~f~~dg~~lat~~~d~~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
+..|.. .|.+++|+ ||+.|++++.+..|. +||..+.. +.....+...+.+++|+|+ +.+||+++.|++
T Consensus 332 ~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~--------~~~l~~~~~~~~~~~~SpD-G~~la~~~~~~~ 401 (1045)
T 1k32_A 332 VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGK--------AEKFEENLGNVFAMGVDRN-GKFAVVANDRFE 401 (1045)
T ss_dssp CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCC--------EEECCCCCCSEEEEEECTT-SSEEEEEETTSE
T ss_pred ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCC--------ceEecCCccceeeeEECCC-CCEEEEECCCCe
Confidence 345566 89999999 999999999988888 88976541 1111134567999999996 469999999999
Q ss_pred EEEEECCCCcEEEE-------EEEEeecCCceEEEecCcc
Q 004998 681 VQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 681 v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
|++||+.+|+.... +.+++|+|++..+++++.+
T Consensus 402 v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 402 IMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPL 441 (1045)
T ss_dssp EEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEE
T ss_pred EEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecC
Confidence 99999999987654 5789999999988887654
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=97.98 E-value=2.1e-05 Score=82.27 Aligned_cols=78 Identities=5% Similarity=-0.054 Sum_probs=62.4
Q ss_pred CCCeEEEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 607 SNLVCSLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+++|+| ||++++++ +++|.+||+.+. ..+..+.....+.+++|+|+++ +|++++.|++|++||
T Consensus 254 ~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~--------~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~v~v~d 322 (349)
T 1jmx_B 254 TELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQR--------KLIKAANLDHTYYCVAFDKKGD-KLYLGGTFNDLAVFN 322 (349)
T ss_dssp SSCEEEEEECSSCTTEEEEE--ESEEEEEETTTT--------EEEEEEECSSCCCEEEECSSSS-CEEEESBSSEEEEEE
T ss_pred CCcceeeEecCCCCCEEEEE--cCeEEEEECccC--------eEEEEEcCCCCccceEECCCCC-EEEEecCCCeEEEEe
Confidence 56789999999 99999888 899999998765 1233333445678999999754 666678899999999
Q ss_pred CCCCcEEEEE
Q 004998 686 VLHLIYFSAL 695 (720)
Q Consensus 686 v~tg~~~~~v 695 (720)
+.+++.+.++
T Consensus 323 ~~~~~~~~~~ 332 (349)
T 1jmx_B 323 PDTLEKVKNI 332 (349)
T ss_dssp TTTTEEEEEE
T ss_pred ccccceeeee
Confidence 9999988764
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=97.98 E-value=2.2e-05 Score=82.78 Aligned_cols=99 Identities=10% Similarity=0.040 Sum_probs=68.6
Q ss_pred CCeEEEEECCCCCEEEEeeC--CCcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCCCEEEEEe-CCCcEEE
Q 004998 608 NLVCSLSFDRDGELFAAAGV--NKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIKSQIASSN-FEGVVQV 683 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~--d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~v~~~~~~~~~laS~s-~D~~v~l 683 (720)
..+..++|+|||++++++.. ++.|.+||+.+... ..+.. ..+...+..|+|+|++ .+|++++ .|++|++
T Consensus 40 ~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~------~~~~~~~~~~~~p~~~a~spdg-~~l~~~~~~~~~v~v 112 (347)
T 3hfq_A 40 QNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTA------HKLNTVVAPGTPPAYVAVDEAR-QLVYSANYHKGTAEV 112 (347)
T ss_dssp SCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEE------EEEEEEEEESCCCSEEEEETTT-TEEEEEETTTTEEEE
T ss_pred CCcceEEEccCCeEEEEEecCCCceEEEEEecCCcE------EEeeeeecCCCCCEEEEECCCC-CEEEEEeCCCCEEEE
Confidence 55678999999995555433 79999999854311 12222 2235578899999965 5777777 6799999
Q ss_pred EECC-CCc--EEEE----------------EEEEeecCCceEEEecCcc
Q 004998 684 GQVL-HLI--YFSA----------------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 684 WDv~-tg~--~~~~----------------v~~v~~~~~~~~~~~~~~~ 713 (720)
||+. +|. .+.. +.+++|+|.+.+++.+.-+
T Consensus 113 ~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~ 161 (347)
T 3hfq_A 113 MKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS 161 (347)
T ss_dssp EEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT
T ss_pred EEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC
Confidence 9996 332 2332 3469999999877776544
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=97.96 E-value=5.4e-05 Score=80.30 Aligned_cols=105 Identities=16% Similarity=0.026 Sum_probs=70.0
Q ss_pred CCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccc----c-cccc-ccceEEecCCCCEEEEEEecCCCCEEEEEe-CC
Q 004998 607 SNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIIN----E-NRDI-HYPVVEMASRSKLSSICWNSYIKSQIASSN-FE 678 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~----~-~~~~-~~~~~~~~~~~~i~~v~~~~~~~~~laS~s-~D 678 (720)
...+.+++|+|||+++ +++..+++|+||++..... . .... ..+............++|+|+++ +|+.++ .+
T Consensus 154 ~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~v~~~~~ 232 (361)
T 3scy_A 154 MPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGK-FAYLINEIG 232 (361)
T ss_dssp SCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSS-EEEEEETTT
T ss_pred CCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCC-EEEEEcCCC
Confidence 4567999999999965 4555589999999765321 0 0000 00122333455688999999764 665555 69
Q ss_pred CcEEEEECCCCcE--EEE----------EEEEeecCCceEE-EecCc
Q 004998 679 GVVQVGQVLHLIY--FSA----------LYCIVLNKLLIIF-RYGMF 712 (720)
Q Consensus 679 ~~v~lWDv~tg~~--~~~----------v~~v~~~~~~~~~-~~~~~ 712 (720)
++|.+||+.+|+. +.+ ..+++|+|.+..+ +++.-
T Consensus 233 ~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~ 279 (361)
T 3scy_A 233 GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRL 279 (361)
T ss_dssp CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECS
T ss_pred CeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCC
Confidence 9999999998864 222 3489999999865 44433
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=2.2e-05 Score=92.06 Aligned_cols=97 Identities=14% Similarity=0.119 Sum_probs=72.5
Q ss_pred CCCeEEEEECCCCCEEEEeeCCC-----cEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc-
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNK-----KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV- 680 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~- 680 (720)
...+.+++|||||++||.++.++ +|+|||+.++. .+.......++.+++|+|++ ..|+.+++|+.
T Consensus 124 ~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~--------~~~~~~~~~~~~~~~wspDg-~~l~~~~~~~~~ 194 (710)
T 2xdw_A 124 TVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK--------ELPDVLERVKFSCMAWTHDG-KGMFYNAYPQQD 194 (710)
T ss_dssp CEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE--------EEEEEEEEECSCCEEECTTS-SEEEEEECCCCS
T ss_pred CEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC--------CCcccccCcccceEEEEeCC-CEEEEEEECCcc
Confidence 34688999999999999876654 99999998762 11111112347789999965 58888888877
Q ss_pred ---------------EEEEECCCCc----EEEE-------EEEEeecCCceEEEecCc
Q 004998 681 ---------------VQVGQVLHLI----YFSA-------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 681 ---------------v~lWDv~tg~----~~~~-------v~~v~~~~~~~~~~~~~~ 712 (720)
|.+||+.+++ .+.+ +.++.|+|++..++..+.
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 195 GKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred ccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 9999999987 3322 578999999988877654
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=97.89 E-value=2.6e-05 Score=90.21 Aligned_cols=105 Identities=4% Similarity=-0.206 Sum_probs=73.3
Q ss_pred CCCCeEEEEECCCCCEEEEeeCC----------CcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEE
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVN----------KKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIAS 674 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS 674 (720)
|...+.+++|+|||+.||+++.| .+|++||+.+.... +...+.... .+...+..++|||++ .+||.
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~SpDG-~~la~ 204 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA--DRSAVRELSDDAHRFVTGPRLSPDG-RQAVW 204 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT--CGGGSEESSCSCSSEECCCEECTTS-SEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccc--cCCceeEEEecCCCcccCceECCCC-CEEEE
Confidence 56788999999999999999887 68999998761000 000111112 235568889999965 58887
Q ss_pred EeCCC--------cEEEEECC-CC---cEEEE-------EEEEeecCCceEEEecCcc
Q 004998 675 SNFEG--------VVQVGQVL-HL---IYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 675 ~s~D~--------~v~lWDv~-tg---~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
++.|+ .|.+||+. +| +.... +.+++|+|++.++..+.-+
T Consensus 205 ~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~ 262 (662)
T 3azo_A 205 LAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRT 262 (662)
T ss_dssp EEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTT
T ss_pred EECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCC
Confidence 77553 79999999 67 33221 7789999999866665544
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=97.89 E-value=1.3e-05 Score=94.44 Aligned_cols=92 Identities=11% Similarity=0.021 Sum_probs=69.5
Q ss_pred CeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC------CEEEEEEecCCCCEEEEEeCC----
Q 004998 609 LVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS------KLSSICWNSYIKSQIASSNFE---- 678 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~------~i~~v~~~~~~~~~laS~s~D---- 678 (720)
...+++|+|||++|+++ |++|++||+.++. +...+.++. ....++|||++ .+||+++.|
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~Spdg-~~l~~~~~~~~~~ 86 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGN--------SSVFLENSTFDEFGHSINDYSISPDG-QFILLEYNYVKQW 86 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCC--------EEEEECTTTTTTCCSCCCEEEECTTS-SEEEEEEEEEECS
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCc--------eEEEEechhhhhhcccccceEECCCC-CEEEEEECCeeeE
Confidence 35689999999999997 9999999988762 122222211 22458999965 588888876
Q ss_pred -----CcEEEEECCCCcEEEE------EEEEeecCCceEEEecC
Q 004998 679 -----GVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 679 -----~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~ 711 (720)
+.+.|||+.+|++... +..++|||+|..+++++
T Consensus 87 r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~ 130 (740)
T 4a5s_A 87 RHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW 130 (740)
T ss_dssp SSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE
T ss_pred EEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE
Confidence 4556999999986542 88999999999999874
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=97.84 E-value=6e-06 Score=83.64 Aligned_cols=91 Identities=8% Similarity=0.009 Sum_probs=63.7
Q ss_pred eehhhhcccCCCCCc--eecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 65 HSDGVELTHGDHLRN--QGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnI--V~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
.+|..++..+.+.+| .+++. +...+ ...+++||| .|.+|. ... .. ...++.+++..|..||+..
T Consensus 61 ~~E~~~l~~l~~~~~~vP~~~~-~~~~~---~~~~~v~e~i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~ 127 (264)
T 1nd4_A 61 QDEAARLSWLATTGVPCAAVLD-VVTEA---GRDWLLLGEVPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLD 127 (264)
T ss_dssp HHHHHHHHHHHTTTCCBCCEEE-EEECS---SCEEEEEECCSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSC
T ss_pred hHHHHHHHHHHhCCCCCCeEEE-eccCC---CCCEEEEEecCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCC
Confidence 356667766654443 45666 33333 247999999 888874 211 22 2356778888888888643
Q ss_pred ----------------------------------------------------------ceeccCCCCcEEEccCCceEEe
Q 004998 142 ----------------------------------------------------------IVVHNVRPSCFVMSSFNHVSFI 163 (720)
Q Consensus 142 ----------------------------------------------------------IvHrDLKP~NILl~~~~~vkli 163 (720)
++|+|++|.|||++.++.+.|+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~li 207 (264)
T 1nd4_A 128 PATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFI 207 (264)
T ss_dssp GGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEEC
T ss_pred CCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEE
Confidence 9999999999999876556799
Q ss_pred ccCcc
Q 004998 164 ESASC 168 (720)
Q Consensus 164 Dfg~a 168 (720)
||+.+
T Consensus 208 D~~~a 212 (264)
T 1nd4_A 208 DCGRL 212 (264)
T ss_dssp CCTTC
T ss_pred cchhc
Confidence 99987
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=97.82 E-value=8.6e-05 Score=78.70 Aligned_cols=91 Identities=11% Similarity=0.084 Sum_probs=61.5
Q ss_pred CCCCeEEEEECCCCCEEEEeeC--CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEe-CCCcEE
Q 004998 606 SSNLVCSLSFDRDGELFAAAGV--NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FEGVVQ 682 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s-~D~~v~ 682 (720)
+...+.+++|+|||++|++++. +++|.|||+...... . ..+..+.....+.+++|+|+++ +|++++ .+++|.
T Consensus 257 ~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~---~-~~~~~~~~g~~~~~~~~spdg~-~l~~~~~~~~~v~ 331 (361)
T 3scy_A 257 NAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT---L-TKVGYQLTGIHPRNFIITPNGK-YLLVACRDTNVIQ 331 (361)
T ss_dssp CCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC---E-EEEEEEECSSCCCEEEECTTSC-EEEEEETTTTEEE
T ss_pred CCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc---E-EEeeEecCCCCCceEEECCCCC-EEEEEECCCCCEE
Confidence 3456789999999998755554 589999998522100 0 1233333345678999999754 666666 689999
Q ss_pred EE--ECCCCcEEEE--------EEEEeec
Q 004998 683 VG--QVLHLIYFSA--------LYCIVLN 701 (720)
Q Consensus 683 lW--Dv~tg~~~~~--------v~~v~~~ 701 (720)
|| |..+|+.... ..||.|.
T Consensus 332 v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 332 IFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 95 6678876543 5677664
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00014 Score=76.25 Aligned_cols=94 Identities=13% Similarity=0.083 Sum_probs=65.2
Q ss_pred CCeEEEEECCCCCEEEEeeCC---Cc--EEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCC----
Q 004998 608 NLVCSLSFDRDGELFAAAGVN---KK--IKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE---- 678 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d---~~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D---- 678 (720)
..+.+++|+|||++||.++.+ +. |.+||+.++. +........ +.+++|+|++ ..||.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~--------~~~l~~~~~-~~~~~wspdg-~~l~~~~~~~~~~ 128 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS--------SKKILEAKN-IRSLEWNEDS-RKLLIVGFKRRED 128 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE--------EEEEEEESE-EEEEEECTTS-SEEEEEEECCCC-
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc--------eEEEEcCCC-ccceeECCCC-CEEEEEEccCCCc
Confidence 347889999999999988764 33 7777876541 222222233 9999999975 567766532
Q ss_pred -----------------------CcEEEEECCCCcEEEE-----EEEEeecCCceEEEecCc
Q 004998 679 -----------------------GVVQVGQVLHLIYFSA-----LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 679 -----------------------~~v~lWDv~tg~~~~~-----v~~v~~~~~~~~~~~~~~ 712 (720)
..|.+||+.+|+.+.. +.+++|+|.+ ++..+..
T Consensus 129 ~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg-~~~~~~~ 189 (347)
T 2gop_A 129 EDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDK-IVVNVPH 189 (347)
T ss_dssp --------CCCC---------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTE-EEEEEEC
T ss_pred CCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCCCcccccCCCCe-EEEEEec
Confidence 5799999999987444 3468999999 5555544
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=97.65 E-value=0.0004 Score=74.09 Aligned_cols=95 Identities=6% Similarity=-0.129 Sum_probs=67.1
Q ss_pred CCCCeEEEEECCCCCEEEEeeC-CCcEEEeeCC-cccccccccccceEEec---CCCCEEEEEEecCCCCEEEEEe-CCC
Q 004998 606 SSNLVCSLSFDRDGELFAAAGV-NKKIKVFECD-AIINENRDIHYPVVEMA---SRSKLSSICWNSYIKSQIASSN-FEG 679 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~-d~~i~iwd~~-~~~~~~~~~~~~~~~~~---~~~~i~~v~~~~~~~~~laS~s-~D~ 679 (720)
+...+.+++|+|||+++++++. +.+|++||+. ++.. .++..+. +...+..++|+|++ .+|+.++ .++
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~------~~~~~~~~~~~g~~p~~~~~spdg-~~l~v~~~~~~ 215 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV------ELVGSVDAPDPGDHPRWVAMHPTG-NYLYALMEAGN 215 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE------EEEEEEECSSTTCCEEEEEECTTS-SEEEEEETTTT
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE------EEeeeEecCCCCCCCCEeEECCCC-CEEEEEECCCC
Confidence 4567999999999998777654 6899999987 4310 1222222 24568999999975 4776666 478
Q ss_pred cEEEEECC--CCcEE------E-----------------EEEEEe-ecCCceEE
Q 004998 680 VVQVGQVL--HLIYF------S-----------------ALYCIV-LNKLLIIF 707 (720)
Q Consensus 680 ~v~lWDv~--tg~~~------~-----------------~v~~v~-~~~~~~~~ 707 (720)
+|.+|++. +|+.. . .+.+++ |+|++..+
T Consensus 216 ~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l 269 (365)
T 1jof_A 216 RICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYM 269 (365)
T ss_dssp EEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEE
T ss_pred eEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEE
Confidence 99999764 67642 1 356788 99999754
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00027 Score=75.67 Aligned_cols=82 Identities=11% Similarity=0.067 Sum_probs=62.0
Q ss_pred EEECCCCCEEEEeeC-----------CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 613 LSFDRDGELFAAAGV-----------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 613 v~f~~dg~~lat~~~-----------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
++|+|||..+..+.. +.+|.+||.++. ..+..+.... ..+|+|+|+++ +|++++. ++|
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~--------~~v~~i~~~~-p~~ia~spdg~-~l~v~n~-~~v 327 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK--------QRVARIPGRD-ALSMTIDQQRN-LMLTLDG-GNV 327 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT--------EEEEEEECTT-CCEEEEETTTT-EEEEECS-SCE
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC--------cEEEEEecCC-eeEEEECCCCC-EEEEeCC-CeE
Confidence 689999876444322 458999998776 2444554444 89999999765 8888886 999
Q ss_pred EEEECCCC--cEEEEE-------EEEeecCCce
Q 004998 682 QVGQVLHL--IYFSAL-------YCIVLNKLLI 705 (720)
Q Consensus 682 ~lWDv~tg--~~~~~v-------~~v~~~~~~~ 705 (720)
.|||+.|+ +.+.++ +.++|+|.|.
T Consensus 328 ~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 328 NVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred EEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 99999999 998884 6677777653
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00086 Score=68.33 Aligned_cols=93 Identities=12% Similarity=0.078 Sum_probs=71.9
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC---CCCEEEEEEecCCCCEEEEEeCCC-cEE
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS---RSKLSSICWNSYIKSQIASSNFEG-VVQ 682 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~i~~v~~~~~~~~~laS~s~D~-~v~ 682 (720)
...+.+|+|+++|.++++.+.+++|++||.... .+..+.. -.....|+++|++ +++++...++ .|.
T Consensus 163 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~---------~~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~~~~~i~ 232 (286)
T 1q7f_A 163 LEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ---------YLRQIGGEGITNYPIGVGINSNG-EILIADNHNNFNLT 232 (286)
T ss_dssp CSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC---------EEEEESCTTTSCSEEEEEECTTC-CEEEEECSSSCEEE
T ss_pred cCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC---------EEEEEccCCccCCCcEEEECCCC-CEEEEeCCCCEEEE
Confidence 457899999999999999888999999996432 1222322 2468899999964 6888877776 999
Q ss_pred EEECCCCcEEEE---------EEEEeecCCceEEEec
Q 004998 683 VGQVLHLIYFSA---------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 683 lWDv~tg~~~~~---------v~~v~~~~~~~~~~~~ 710 (720)
+||. +|+.+.+ .++++|++.+.+++++
T Consensus 233 ~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 233 IFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLAS 268 (286)
T ss_dssp EECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEEE
T ss_pred EECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEEC
Confidence 9995 5666654 4689999999988885
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00028 Score=75.19 Aligned_cols=88 Identities=9% Similarity=-0.054 Sum_probs=61.1
Q ss_pred EEEECCCCCEEEEeeC-CCc--EEEeeCCcccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004998 612 SLSFDRDGELFAAAGV-NKK--IKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 612 sv~f~~dg~~lat~~~-d~~--i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~ 687 (720)
..+|+|||++||.++. +++ |.+||..+.. +.....+ ...+..++|+|++ ..||.++.|+.|.+||+.
T Consensus 40 ~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~--------~~~lt~~~~~~~~~~~~spdg-~~l~~~~~~~~l~~~d~~ 110 (388)
T 3pe7_A 40 QKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV--------ATQLTEGRGDNTFGGFLSPDD-DALFYVKDGRNLMRVDLA 110 (388)
T ss_dssp SCCBCTTSCEEEEEECTTSSCEEEEEETTTCE--------EEECCCSSCBCSSSCEECTTS-SEEEEEETTTEEEEEETT
T ss_pred CccCCCCCCEEEEEEcCCCCceEEEEeCCCCc--------eEEeeeCCCCCccceEEcCCC-CEEEEEeCCCeEEEEECC
Confidence 3889999999999988 664 8888877652 1111122 2234467899965 589999999999999999
Q ss_pred CCcEEEE-------EEEE--eecCCceEEE
Q 004998 688 HLIYFSA-------LYCI--VLNKLLIIFR 708 (720)
Q Consensus 688 tg~~~~~-------v~~v--~~~~~~~~~~ 708 (720)
+|+.... +... .+++.+..+.
T Consensus 111 ~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~ 140 (388)
T 3pe7_A 111 TLEENVVYQVPAEWVGYGTWVANSDCTKLV 140 (388)
T ss_dssp TCCEEEEEECCTTEEEEEEEEECTTSSEEE
T ss_pred CCcceeeeechhhcccccceeECCCCCeec
Confidence 9986543 2222 3477776665
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00013 Score=85.86 Aligned_cols=96 Identities=14% Similarity=0.056 Sum_probs=69.6
Q ss_pred CCeEEEEECCCCCEEEEeeCC-----CcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc--
Q 004998 608 NLVCSLSFDRDGELFAAAGVN-----KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV-- 680 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~-- 680 (720)
..+.+++|||||++||.++.+ .+|+|||+.++. .+.......++..++|+|+ ..|+.+++|+.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~--------~~~~~~~~~~~~~~~wspD--~~l~~~~~~~~~~ 232 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGK--------PLADELKWVKFSGLAWLGN--DALLYSRFAEPKE 232 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCC--------EEEEEEEEEESCCCEESTT--SEEEEEECCCC--
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC--------CCCccCCCceeccEEEECC--CEEEEEEecCccc
Confidence 467899999999999987664 579999998762 1111111223468899997 57777777765
Q ss_pred ------------EEEEECCCCc----EEEE-------EEEEeecCCceEEEecCcc
Q 004998 681 ------------VQVGQVLHLI----YFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 681 ------------v~lWDv~tg~----~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
|.+|++.|++ .+.+ +.++.|++++..++..+.+
T Consensus 233 ~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~ 288 (741)
T 1yr2_A 233 GQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSE 288 (741)
T ss_dssp ------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEEC
T ss_pred ccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEc
Confidence 8999998886 3332 6789999999877766543
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00087 Score=69.87 Aligned_cols=97 Identities=11% Similarity=0.008 Sum_probs=74.2
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCC----Cc
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE----GV 680 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D----~~ 680 (720)
+...+.+++|+|||++++++..++.|.+||..+.. ..... .....+.+++|+|++ .+++++..+ +.
T Consensus 43 ~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~--------~~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~ 113 (333)
T 2dg1_A 43 KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE--------IKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGG 113 (333)
T ss_dssp SCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC--------EEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCE
T ss_pred cCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc--------EEEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCce
Confidence 35678999999999999999999999999986541 11111 235679999999965 577776666 68
Q ss_pred EEEEECCCCcEEE---------EEEEEeecCCceEEEecC
Q 004998 681 VQVGQVLHLIYFS---------ALYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 681 v~lWDv~tg~~~~---------~v~~v~~~~~~~~~~~~~ 711 (720)
|.+||..+++... .++++++++.+.++..++
T Consensus 114 i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 153 (333)
T 2dg1_A 114 IFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDF 153 (333)
T ss_dssp EEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEEC
T ss_pred EEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEec
Confidence 9999998886531 178899999998887765
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=97.48 E-value=0.0014 Score=68.90 Aligned_cols=97 Identities=14% Similarity=0.146 Sum_probs=71.5
Q ss_pred CCCCCeEEEEECC-CCCEEEEee-CCCcEEEeeCCcccccccccccceEEecC-----------CCCEEEEEEecCCCCE
Q 004998 605 NSSNLVCSLSFDR-DGELFAAAG-VNKKIKVFECDAIINENRDIHYPVVEMAS-----------RSKLSSICWNSYIKSQ 671 (720)
Q Consensus 605 ~~~~~V~sv~f~~-dg~~lat~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-----------~~~i~~v~~~~~~~~~ 671 (720)
++-...++|+|+| +|.++++.+ .+++|++||.... .+..+.. -.....|+++|+.+.+
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~---------~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l 210 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK---------FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQL 210 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC---------EEEEECEECCSSSCCTTEESCEEEEEEETTTTEE
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC---------EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEE
Confidence 4456789999999 899999987 7999999994322 1111111 1237899999976777
Q ss_pred EEEEeCCCcEEEEECCCCcEEEE---------EEEEeecCCceEEEec
Q 004998 672 IASSNFEGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 672 laS~s~D~~v~lWDv~tg~~~~~---------v~~v~~~~~~~~~~~~ 710 (720)
+++...++.|++||..+|+.+.+ +++++|+|...+...|
T Consensus 211 ~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g 258 (329)
T 3fvz_A 211 CVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNG 258 (329)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEEC
T ss_pred EEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCC
Confidence 78888899999999999998876 5788999933333333
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00011 Score=78.45 Aligned_cols=94 Identities=11% Similarity=0.049 Sum_probs=65.2
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCC-cccccccccccceEEecCCCCEEEEEEecCCCC-EEEEEe---------
Q 004998 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECD-AIINENRDIHYPVVEMASRSKLSSICWNSYIKS-QIASSN--------- 676 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~-~laS~s--------- 676 (720)
..+..++|+|||++|++++.+ +|.+||+. ++. . ..+......+...+++|+|+++. +|++++
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~--~----~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTE--I----VHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTE--E----EEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCC--E----EEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccc
Confidence 457899999999999999888 99999975 331 0 01111111123567899997543 466765
Q ss_pred ----CCCcEEEEECC-CCcEEEE-----------EEEEeecCCceEEE
Q 004998 677 ----FEGVVQVGQVL-HLIYFSA-----------LYCIVLNKLLIIFR 708 (720)
Q Consensus 677 ----~D~~v~lWDv~-tg~~~~~-----------v~~v~~~~~~~~~~ 708 (720)
.|++|++|++. .|+.... +.+++|+|.+..+.
T Consensus 113 ~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~ 160 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLY 160 (365)
T ss_dssp EESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred eeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEE
Confidence 69999999997 5654322 56899999997544
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=97.40 E-value=0.0019 Score=65.74 Aligned_cols=103 Identities=8% Similarity=0.018 Sum_probs=74.8
Q ss_pred CCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-------CCCCEEEEEEecCCCCEEE
Q 004998 601 GDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-------SRSKLSSICWNSYIKSQIA 673 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-------~~~~i~~v~~~~~~~~~la 673 (720)
|.-.++-..+.+|+++++|.++++.+.+++|.+||.... .+..+. +...+.++++++..+.+++
T Consensus 23 g~~~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~---------~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v 93 (286)
T 1q7f_A 23 GVMEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR---------FKFQFGECGKRDSQLLYPNRVAVVRNSGDIIV 93 (286)
T ss_dssp SSSTTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSC---------EEEEECCBSSSTTCBSSEEEEEEETTTTEEEE
T ss_pred CCCCCccCCCceEEECCCCCEEEEECCCCEEEEECCCCc---------EEEEecccCCCcccccCceEEEEEcCCCeEEE
Confidence 344455677999999999999999999999999996532 111221 1245889999643455555
Q ss_pred EEeC-CCcEEEEECCCCcEEEE--------EEEEeecCCceEEEecCcc
Q 004998 674 SSNF-EGVVQVGQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 674 S~s~-D~~v~lWDv~tg~~~~~--------v~~v~~~~~~~~~~~~~~~ 713 (720)
+... ++.|.+|| .+|+.+.+ ..++++++.+.+++.++.+
T Consensus 94 ~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 141 (286)
T 1q7f_A 94 TERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKV 141 (286)
T ss_dssp EECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTT
T ss_pred EcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCC
Confidence 5533 89999999 67777654 6789999999888877654
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00034 Score=80.72 Aligned_cols=100 Identities=8% Similarity=-0.015 Sum_probs=68.6
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCC--------cEEEeeCC-cccccccccccceEEecC-CCCEEEEEEecCCCCEEEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNK--------KIKVFECD-AIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIAS 674 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~--------~i~iwd~~-~~~~~~~~~~~~~~~~~~-~~~i~~v~~~~~~~~~laS 674 (720)
.+...+.+++|+|||++||.++.++ .|++||+. ++. ...+.....+ ...+..++|+|+++ ++++
T Consensus 185 ~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~-----~~~~~~l~~~~~~~~~~~~~spdg~-l~~~ 258 (662)
T 3azo_A 185 DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR-----FADTRTLLGGPEEAIAQAEWAPDGS-LIVA 258 (662)
T ss_dssp SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC-----EEEEEEEEEETTBCEEEEEECTTSC-EEEE
T ss_pred cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc-----ccccEEeCCCCCceEcceEECCCCe-EEEE
Confidence 4457888999999999999888664 79999986 330 0011222222 56799999999876 8899
Q ss_pred EeCCC--cEEEEECCCCcEEEE---------------EEEEeecCCceEEEec
Q 004998 675 SNFEG--VVQVGQVLHLIYFSA---------------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 675 ~s~D~--~v~lWDv~tg~~~~~---------------v~~v~~~~~~~~~~~~ 710 (720)
++.|+ .|.+||+.+|+.... +.+++|++.+.++.++
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~ 311 (662)
T 3azo_A 259 TDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVH 311 (662)
T ss_dssp ECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEE
T ss_pred ECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEE
Confidence 99999 455556667765432 2356777766666554
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.002 Score=67.58 Aligned_cols=98 Identities=15% Similarity=0.011 Sum_probs=74.2
Q ss_pred CCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEe---cCCCCEEEEEEecCCCCEEEEEe------
Q 004998 607 SNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASRSKLSSICWNSYIKSQIASSN------ 676 (720)
Q Consensus 607 ~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~i~~v~~~~~~~~~laS~s------ 676 (720)
-....+|+|+|+ |.++++...+++|++||..++. .+..+ .....+..++|+| +..+++.+
T Consensus 195 ~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~--------~~~~~~~~~~~~~~~~~~~~p--g~~~~~~g~~~v~~ 264 (329)
T 3fvz_A 195 FSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE--------FVREIKHASFGRNVFAISYIP--GFLFAVNGKPYFGD 264 (329)
T ss_dssp ESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC--------EEEEECCTTTTTCEEEEEEET--TEEEEEECCCCTTC
T ss_pred cCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc--------EEEEEeccccCCCcceeeecC--CEEEEeCCCEEecc
Confidence 356899999999 8889999999999999987441 22222 1245688999999 32333332
Q ss_pred -CCCcEEEEECCCCcEEEE----------EEEEeecCCceEEEecCccc
Q 004998 677 -FEGVVQVGQVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 677 -~D~~v~lWDv~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~ 714 (720)
.+.+|++||..+|+.+.+ .++|++++.+.+++++..+.
T Consensus 265 ~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~ 313 (329)
T 3fvz_A 265 QEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTN 313 (329)
T ss_dssp SCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSC
T ss_pred CCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCC
Confidence 345999999999998876 57899999999998887654
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00068 Score=72.10 Aligned_cols=99 Identities=6% Similarity=-0.070 Sum_probs=68.6
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEE--ecCCCCEEEE---------
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICW--NSYIKSQIAS--------- 674 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~--~~~~~~~laS--------- 674 (720)
+...+.+++|+|||+.||.++.++.|++||+.+.... .+... +...+....| +|++ .+|+.
T Consensus 79 ~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~------~~~~~-~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~ 150 (388)
T 3pe7_A 79 RGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEEN------VVYQV-PAEWVGYGTWVANSDC-TKLVGIEIRREDWV 150 (388)
T ss_dssp SCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEE------EEEEC-CTTEEEEEEEEECTTS-SEEEEEEEEGGGCC
T ss_pred CCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcce------eeeec-hhhcccccceeECCCC-CeeccccccCcccc
Confidence 3445557789999999999999999999998876210 11111 2334444444 7754 46663
Q ss_pred -------------EeCCCcEEEEECCCCcEEEE------EEEEeecC-CceEEEecCc
Q 004998 675 -------------SNFEGVVQVGQVLHLIYFSA------LYCIVLNK-LLIIFRYGMF 712 (720)
Q Consensus 675 -------------~s~D~~v~lWDv~tg~~~~~------v~~v~~~~-~~~~~~~~~~ 712 (720)
.+.+..|.+||+.+|+.... +..++|+| .+..+++.+-
T Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~ 208 (388)
T 3pe7_A 151 PLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHE 208 (388)
T ss_dssp CCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEEC
T ss_pred cccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEe
Confidence 33567899999999975443 67899999 9987776553
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00045 Score=73.46 Aligned_cols=96 Identities=9% Similarity=-0.091 Sum_probs=62.3
Q ss_pred CCCCeEEEEECCCCCEEEEeeCC---CcEEEeeCCcccccccccccceEEecCCCCE-EEEEEecCCCCEEEEEeCCCcE
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVN---KKIKVFECDAIINENRDIHYPVVEMASRSKL-SSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i-~~v~~~~~~~~~laS~s~D~~v 681 (720)
|...+.+++|+|||++||.++.. ..|.+||..+.. +.....+...+ .++.|+|++ .+||.++.++.|
T Consensus 34 ~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~--------~~~l~~~~~~~~~~~~~spdg-~~l~~~~~~~~l 104 (396)
T 3c5m_A 34 HRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ--------AVQLTEGKGDNTFGGFISTDE-RAFFYVKNELNL 104 (396)
T ss_dssp ECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE--------EEECCCSSCBCTTTCEECTTS-SEEEEEETTTEE
T ss_pred cceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCc--------EEEeecCCCCccccceECCCC-CEEEEEEcCCcE
Confidence 34557889999999998877543 478888976652 11111122232 347899965 689999989999
Q ss_pred EEEECCCCcEEEEEE-EEeecCCceEEEec
Q 004998 682 QVGQVLHLIYFSALY-CIVLNKLLIIFRYG 710 (720)
Q Consensus 682 ~lWDv~tg~~~~~v~-~v~~~~~~~~~~~~ 710 (720)
.+||+.+|+...... ...|++.+..+++.
T Consensus 105 ~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~ 134 (396)
T 3c5m_A 105 MKVDLETLEEQVIYTVDEEWKGYGTWVANS 134 (396)
T ss_dssp EEEETTTCCEEEEEECCTTEEEEEEEEECT
T ss_pred EEEECCCCCcEEEEecccccCCCCCEEEec
Confidence 999999987654321 11344555444443
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0013 Score=67.55 Aligned_cols=93 Identities=11% Similarity=-0.052 Sum_probs=72.0
Q ss_pred CCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 607 SNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
.....+++|+|+|+ +++++..++.|.+||..+.. . ........+.+++|+|++ .++++...++.|.+||
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~-~--------~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQL-S--------PEMHPSHHQNGHCLNKQG-HLIACSHGLRRLERQR 96 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCE-E--------EEESSCSSEEEEEECTTC-CEEEEETTTTEEEEEC
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCe-E--------EEECCCCCcceeeECCCC-cEEEEecCCCeEEEEc
Confidence 46688999999998 88898999999999976541 1 111234568999999964 5777777779999999
Q ss_pred CCCCcEEEE-----------EEEEeecCCceEEEe
Q 004998 686 VLHLIYFSA-----------LYCIVLNKLLIIFRY 709 (720)
Q Consensus 686 v~tg~~~~~-----------v~~v~~~~~~~~~~~ 709 (720)
..+|+.... ++.+++++.+.++++
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vt 131 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFS 131 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEEEE
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEE
Confidence 998875432 346899999998886
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00021 Score=74.57 Aligned_cols=103 Identities=8% Similarity=0.015 Sum_probs=70.6
Q ss_pred eeeehhhhcccCC-CCCc--eecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGD-HLRN--QGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~-HpnI--V~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..+|..+. +..| .+++. ...........|+|||+ .|.+|.+... ..++..+...++.|++..|..||
T Consensus 56 ~~~~E~~~l~~l~~~~~v~vP~~~~-~~~~~~~~~~~~~vm~~i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~la~LH 131 (304)
T 3sg8_A 56 NLFNEVNILKRIHNKLPLPIPEVVF-TGMPSETYQMSFAGFTKIKGVPLTPLLL---NNLPKQSQNQAAKDLARFLSELH 131 (304)
T ss_dssp HHHHHHHHHHHHTTSSSSCCCCEEE-ECCCCSSCSCSCEEEECCCCEECCHHHH---HTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCceEe-ecCCCCCCCcceEEEcccCCeECCcccc---ccCCHHHHHHHHHHHHHHHHHHH
Confidence 4446666776652 3222 23333 22222222245889999 8888865332 23788888899999999999999
Q ss_pred H----------------------------------------------------------cCceeccCCCCcEEEcc--CC
Q 004998 139 S----------------------------------------------------------QGIVVHNVRPSCFVMSS--FN 158 (720)
Q Consensus 139 s----------------------------------------------------------~gIvHrDLKP~NILl~~--~~ 158 (720)
+ ..++|+|++|.||+++. .+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~ 211 (304)
T 3sg8_A 132 SINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNT 211 (304)
T ss_dssp HSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTE
T ss_pred cCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCC
Confidence 6 24799999999999997 45
Q ss_pred ceEEeccCccc
Q 004998 159 HVSFIESASCS 169 (720)
Q Consensus 159 ~vkliDfg~a~ 169 (720)
.+.++||+.+.
T Consensus 212 ~~~~iD~~~~~ 222 (304)
T 3sg8_A 212 ICGIIDFGDAA 222 (304)
T ss_dssp EEEECCCTTCE
T ss_pred EEEEEeCCCCc
Confidence 67899998874
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0024 Score=72.81 Aligned_cols=93 Identities=15% Similarity=0.013 Sum_probs=68.9
Q ss_pred ccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCC--cccccccccccceEEecCCCCEEEEEEe-
Q 004998 589 FSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECD--AIINENRDIHYPVVEMASRSKLSSICWN- 665 (720)
Q Consensus 589 ~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~i~~v~~~- 665 (720)
-.+.++++++.. ...+..++|+|||+++.+++.|++|.+||+. +. ..+.++.....-..++|+
T Consensus 184 ~~t~~v~~~i~~------g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~--------~~v~~i~~G~~P~~ia~s~ 249 (567)
T 1qks_A 184 GSTYEIKTVLDT------GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP--------TTVAEIKIGSEARSIETSK 249 (567)
T ss_dssp TTTCCEEEEEEC------SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC--------CEEEEEECCSEEEEEEECC
T ss_pred CCCCeEEEEEeC------CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCC--------cEeEEEecCCCCceeEEcc
Confidence 355677777765 2456799999999999889999999999985 33 133344333446799999
Q ss_pred ---cCCCCEEEEEeC-CCcEEEEECCCCcEEEEEE
Q 004998 666 ---SYIKSQIASSNF-EGVVQVGQVLHLIYFSALY 696 (720)
Q Consensus 666 ---~~~~~~laS~s~-D~~v~lWDv~tg~~~~~v~ 696 (720)
|+++ +|+.+++ +++|.|||..|.+.+.+|.
T Consensus 250 ~~~pDGk-~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 250 MEGWEDK-YAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp STTCTTT-EEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred ccCCCCC-EEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 5655 6665554 6999999999999988753
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0013 Score=69.83 Aligned_cols=93 Identities=10% Similarity=-0.146 Sum_probs=63.3
Q ss_pred CeEEEEECCCCCEEEEeeCC-----CcEEEeeCCcccccccccccceEEecCCCCEEEEEEec-CCCCEEEEEe------
Q 004998 609 LVCSLSFDRDGELFAAAGVN-----KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNS-YIKSQIASSN------ 676 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~-~~~~~laS~s------ 676 (720)
.+.+++|+|||++||.++.+ ++|.+||+.+... ..+..+. ... ++|+| +++ +|++++
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~------~~l~~~~---~~~-~~~s~~dg~-~l~~~~~~~p~~ 307 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLEN------EEVMVMP---PCS-HLMSNFDGS-LMVGDGCDAPVD 307 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCE------EEEEECC---SEE-EEEECSSSS-EEEEEECCC---
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCCe------EEeeeCC---CCC-CCccCCCCc-eEEEecCCccee
Confidence 57889999999988877655 5599999876521 0111111 234 89999 765 777654
Q ss_pred ----------CCCcEEEEECCCCcEEE--E---------------EEEEeecCCceEEEecCc
Q 004998 677 ----------FEGVVQVGQVLHLIYFS--A---------------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 677 ----------~D~~v~lWDv~tg~~~~--~---------------v~~v~~~~~~~~~~~~~~ 712 (720)
.+..|.+||+.+|+... . +.+++|++.+..+.+.+-
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 308 VADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp -------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred eccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEec
Confidence 34789999999886432 1 123689999887776553
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0019 Score=63.63 Aligned_cols=59 Identities=12% Similarity=0.014 Sum_probs=45.9
Q ss_pred CCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCCcEEEccCCceEE
Q 004998 104 DVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPSCFVMSSFNHVSF 162 (720)
Q Consensus 104 ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gIvHrDLKP~NILl~~~~~vkl 162 (720)
..+|.+.|...+.+++++++|.++.|.+.+|.-+-. ..-..+=+-|..|+|..+|.|.+
T Consensus 32 ~vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f 91 (229)
T 2yle_A 32 ALSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTL 91 (229)
T ss_dssp EEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEE
T ss_pred cccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceec
Confidence 458999998888889999999999999999877621 11123334568999999998887
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0027 Score=68.77 Aligned_cols=86 Identities=6% Similarity=-0.116 Sum_probs=64.4
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv 686 (720)
...|.++.+.+.. ||+++.||+|.+||+..... .. ....|+|+||||.+ ++.+..||+|++|+.
T Consensus 126 ~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~--------~~---~~~~Vs~v~WSpkG---~~vg~~dg~i~~~~~ 189 (388)
T 1xip_A 126 EKPVFQLKNVNNT--LVILNSVNDLSALDLRTKST--------KQ---LAQNVTSFDVTNSQ---LAVLLKDRSFQSFAW 189 (388)
T ss_dssp SSCEEEEEECSSE--EEEEETTSEEEEEETTTCCE--------EE---EEESEEEEEECSSE---EEEEETTSCEEEEEE
T ss_pred ecceeeEEecCCC--EEEEECCCCEEEEEccCCcc--------cc---ccCCceEEEEcCCc---eEEEEcCCcEEEEcC
Confidence 4557888877543 99999999999999876521 11 13479999999964 678889999999999
Q ss_pred CCCcE--EE----------------EEEEEeecCCceEEE
Q 004998 687 LHLIY--FS----------------ALYCIVLNKLLIIFR 708 (720)
Q Consensus 687 ~tg~~--~~----------------~v~~v~~~~~~~~~~ 708 (720)
.++++ .. .|.+|.|.+....++
T Consensus 190 ~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv 229 (388)
T 1xip_A 190 RNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLA 229 (388)
T ss_dssp ETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEE
T ss_pred CCccccccceecCCcccccccCCCeeEEEEEEecCCeEEE
Confidence 88774 22 278889987665544
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0014 Score=70.20 Aligned_cols=89 Identities=12% Similarity=0.050 Sum_probs=63.2
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEec-----
Q 004998 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMA----- 654 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~----- 654 (720)
.+.+++.++.-| .+. .++|+|||+++.+++ .+++|.+||..+.. ++.++.
T Consensus 39 ~t~~~~~~i~~g-----~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~--------~~~~i~~~~~~ 103 (361)
T 2oiz_A 39 TNGKFLGMVPTA-----FNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT--------FEKEISLPPKR 103 (361)
T ss_dssp TTCCEEEEEECC-----EEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC--------EEEEEEECTTB
T ss_pred CCCeEEEEecCC-----CCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc--------EEEEEEcCccc
Confidence 456666666532 233 899999999887775 37789999987651 222221
Q ss_pred --CCCCEEEEEEecCCCCEEEEEeC--CCcEEEEECCCCcEEEE
Q 004998 655 --SRSKLSSICWNSYIKSQIASSNF--EGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 655 --~~~~i~~v~~~~~~~~~laS~s~--D~~v~lWDv~tg~~~~~ 694 (720)
+......++|+|+++ +|+.+.+ +++|.+||+.+++.+.+
T Consensus 104 ~~~g~~p~~i~~spdg~-~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 104 VQGLNYDGLFRQTTDGK-FIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp CCBCCCGGGEEECTTSS-EEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred cccCCCcceEEECCCCC-EEEEECCCCCCeEEEEECCCCcEEEE
Confidence 123456899999764 7777664 68999999999998877
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0013 Score=68.72 Aligned_cols=101 Identities=7% Similarity=-0.088 Sum_probs=67.0
Q ss_pred eeeehhhhcccCCCCC---ceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLR---NQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~Hpn---IV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..+|..+.+.. |.+++. +... .....|++||+ .|.+|.+..-. .++..+...++.++...|..||
T Consensus 55 ~~~~E~~~L~~L~~~~~v~VP~~~~-~~~~--~~g~~~~v~e~i~G~~l~~~~~~---~l~~~~~~~~~~~lg~~La~LH 128 (306)
T 3tdw_A 55 ELNKEIQLLPLLVGCVKVNIPQYVY-IGKR--SDGNPFVGYRKVQGQILGEDGMA---VLPDDAKDRLALQLAEFMNELS 128 (306)
T ss_dssp HHHHHHHHHHHHTTTCSSBCCCEEE-EEEC--TTSCEEEEEECCCSEECHHHHHT---TSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCCeEe-eccc--CCCceEEEEeccCCeECchhhhh---hCCHHHHHHHHHHHHHHHHHHh
Confidence 4557777887776532 334443 2221 12345799999 88888763211 2466666677777777777777
Q ss_pred Hc------------------------------------------------------------CceeccCCCCcEEEcc--
Q 004998 139 SQ------------------------------------------------------------GIVVHNVRPSCFVMSS-- 156 (720)
Q Consensus 139 s~------------------------------------------------------------gIvHrDLKP~NILl~~-- 156 (720)
+. .++|+|++|.|||++.
T Consensus 129 ~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~ 208 (306)
T 3tdw_A 129 AFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNS 208 (306)
T ss_dssp HSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTC
T ss_pred cCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCC
Confidence 42 3499999999999987
Q ss_pred -CCce-EEeccCccc
Q 004998 157 -FNHV-SFIESASCS 169 (720)
Q Consensus 157 -~~~v-kliDfg~a~ 169 (720)
++.+ .|+||+.+.
T Consensus 209 ~~~~~~~~iD~~~a~ 223 (306)
T 3tdw_A 209 RQTPLTGIIDFGDAA 223 (306)
T ss_dssp SSCCEEEECCCTTCE
T ss_pred CCCceEEEEehhhcC
Confidence 4564 899998773
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0024 Score=74.61 Aligned_cols=92 Identities=17% Similarity=0.200 Sum_probs=65.0
Q ss_pred CCCeEEEEECCCCCEEE-----EeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc-
Q 004998 607 SNLVCSLSFDRDGELFA-----AAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV- 680 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~la-----t~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~- 680 (720)
...|.+++|||||++|| +|+...+|+|||+.++. .+.......+...++|+ ++ ..|+.+++|..
T Consensus 128 ~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~--------~~~~~~~~~k~~~~~Ws-Dg-~~l~y~~~~~~~ 197 (693)
T 3iuj_A 128 TTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ--------PLETPLKDVKFSGISWL-GN-EGFFYSSYDKPD 197 (693)
T ss_dssp CCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS--------EEEEEEEEEESCCCEEE-TT-TEEEEEESSCCC
T ss_pred cEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC--------CCccccCCceeccEEEe-CC-CEEEEEEecCcc
Confidence 45788999999999998 44445799999998862 11111111224678999 65 47777777754
Q ss_pred ------------EEEEECCCCc----EEEE--------EEEEeecCCceEEE
Q 004998 681 ------------VQVGQVLHLI----YFSA--------LYCIVLNKLLIIFR 708 (720)
Q Consensus 681 ------------v~lWDv~tg~----~~~~--------v~~v~~~~~~~~~~ 708 (720)
|.+|++.|++ ++.+ +.++.|++++..+.
T Consensus 198 ~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~ 249 (693)
T 3iuj_A 198 GSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLL 249 (693)
T ss_dssp -------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEE
T ss_pred cccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEE
Confidence 9999998876 2321 46789999998774
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0057 Score=64.19 Aligned_cols=110 Identities=6% Similarity=-0.022 Sum_probs=75.4
Q ss_pred ccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCC------CEE
Q 004998 587 LSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRS------KLS 660 (720)
Q Consensus 587 ~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~------~i~ 660 (720)
..-.++++++++.. ......|+|++||+++++...+++|.+||..+.. .+..+.... ...
T Consensus 69 iD~~t~~~~~~i~~------~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~--------~~~~i~~g~~~~~~~~p~ 134 (328)
T 3dsm_A 69 IDINTFKEVGRITG------FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYE--------ITGYIECPDMDMESGSTE 134 (328)
T ss_dssp EETTTCCEEEEEEC------CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTE--------EEEEEECTTCCTTTCBCC
T ss_pred EECcccEEEEEcCC------CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCe--------EEEEEEcCCccccCCCcc
Confidence 34455666666643 3668999999999877877689999999987752 111222112 455
Q ss_pred EEEEecCCCCEEEEEe-CCCcEEEEECCCCcEEEEE------EEEeecCCceEEEecCc
Q 004998 661 SICWNSYIKSQIASSN-FEGVVQVGQVLHLIYFSAL------YCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 661 ~v~~~~~~~~~laS~s-~D~~v~lWDv~tg~~~~~v------~~v~~~~~~~~~~~~~~ 712 (720)
.+++. ++.++++.. .+++|.+||..+++.+.++ ..+++++.+.++...+-
T Consensus 135 ~i~~~--~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~ 191 (328)
T 3dsm_A 135 QMVQY--GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDG 191 (328)
T ss_dssp CEEEE--TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCC
T ss_pred eEEEE--CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECC
Confidence 67772 343444433 5899999999999988773 56788888887776654
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.007 Score=61.94 Aligned_cols=92 Identities=12% Similarity=-0.046 Sum_probs=63.8
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCC-cccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECD-AIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~-~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~lW 684 (720)
...++.++|+|||+++++.+.+++|.+||+. .+. .+.....+ .....+.+++|++++ ++.++. ++.|.+|
T Consensus 171 ~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~-----~~~~~~~~~~~~~~p~~i~~d~~G-~l~v~~--~~~v~~~ 242 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGE-----TEYQGVHFTVEPGKTDGLRVDAGG-LIWASA--GDGVHVL 242 (296)
T ss_dssp CSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSC-----EEEEEEEECCSSSCCCSEEEBTTS-CEEEEE--TTEEEEE
T ss_pred CCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCc-----CcCCCeEeeCCCCCCCeEEECCCC-CEEEEc--CCeEEEE
Confidence 4668999999999988888889999999986 221 00001111 123456789999965 465555 7899999
Q ss_pred ECCCCcEEEE------EEEEee-cCCceEE
Q 004998 685 QVLHLIYFSA------LYCIVL-NKLLIIF 707 (720)
Q Consensus 685 Dv~tg~~~~~------v~~v~~-~~~~~~~ 707 (720)
|.. |+.+.. +.+++| ++.+..+
T Consensus 243 ~~~-g~~~~~~~~~~~~~~~~f~~~d~~~L 271 (296)
T 3e5z_A 243 TPD-GDELGRVLTPQTTSNLCFGGPEGRTL 271 (296)
T ss_dssp CTT-SCEEEEEECSSCCCEEEEESTTSCEE
T ss_pred CCC-CCEEEEEECCCCceeEEEECCCCCEE
Confidence 986 777665 467888 4666533
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=96.65 E-value=0.015 Score=58.16 Aligned_cols=98 Identities=7% Similarity=-0.013 Sum_probs=73.0
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004998 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~ 687 (720)
..+.+|+++++|.++++...++.|.+||........ ....+-..+.+|++++++ .+.++...++.|.+||..
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~-------~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV-------LPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE-------CCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTT
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe-------ecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCC
Confidence 467899999999998888888999999976541100 011122568899999965 677777778999999997
Q ss_pred CCcEEE-------EEEEEeecCCceEEEecCcc
Q 004998 688 HLIYFS-------ALYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 688 tg~~~~-------~v~~v~~~~~~~~~~~~~~~ 713 (720)
+..... ...++++++.+.+++.+..+
T Consensus 222 ~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 222 STTSTVLPFTGLNTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp CSCCEECCCCSCSCEEEEEECTTCCEEEEEGGG
T ss_pred CCcceeeccCCCCCceeEEECCCCCEEEEECCC
Confidence 654322 27899999999888887665
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0084 Score=62.48 Aligned_cols=91 Identities=13% Similarity=-0.018 Sum_probs=66.2
Q ss_pred CCeEEEEECCCCCEEEEe---------eCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCC
Q 004998 608 NLVCSLSFDRDGELFAAA---------GVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~---------~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D 678 (720)
..|.+++| ||+++|.. +.+..|.+||+.+.. + ..+ ..+.+++|||++ .+||.++.+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~--------~-~~l---~~~~~~~~SpDg-~~la~~~~~ 79 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNA--------R-RFI---ENATMPRISPDG-KKIAFMRAN 79 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCC--------E-EEE---ESCEEEEECTTS-SEEEEEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCc--------e-EEc---ccCCCeEECCCC-CEEEEEEec
Confidence 55788888 99987764 236789999987651 1 122 458899999975 577777654
Q ss_pred ---Cc--EEEEECCCCcEEEE-----EEEEeecCCceEEEecCcc
Q 004998 679 ---GV--VQVGQVLHLIYFSA-----LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 679 ---~~--v~lWDv~tg~~~~~-----v~~v~~~~~~~~~~~~~~~ 713 (720)
+. |.+||+.+|+.... +.+++|+|.+..+.+.+.+
T Consensus 80 ~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~l~~~~~~ 124 (347)
T 2gop_A 80 EEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRKLLIVGFK 124 (347)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSEEEEEEEC
T ss_pred cCCCcceEEEEECCCCceEEEEcCCCccceeECCCCCEEEEEEcc
Confidence 33 77789988876543 6789999999988887754
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=96.41 E-value=0.032 Score=57.75 Aligned_cols=98 Identities=11% Similarity=-0.008 Sum_probs=64.4
Q ss_pred CCCeEEEEECCCCCEEEEeeCC----CcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCCCEEEEEeC----
Q 004998 607 SNLVCSLSFDRDGELFAAAGVN----KKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIKSQIASSNF---- 677 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d----~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~v~~~~~~~~~laS~s~---- 677 (720)
...|.+++|+|||++++++..+ +.|.+||..+.... .+.. ......+.+++|+|++ .++++...
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~------~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~ 158 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ------DIIEDLSTAYCIDDMVFDSKG-GFYFTDFRGYST 158 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE------EEECSSSSCCCEEEEEECTTS-CEEEEECCCBTT
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE------EEEccCccCCcccceEECCCC-CEEEEecccccc
Confidence 4679999999999998887766 79999998764210 0100 1124568999999965 56666554
Q ss_pred --CCcEEEEECCCCcEEEE------EEEEeecCCce-EEEecC
Q 004998 678 --EGVVQVGQVLHLIYFSA------LYCIVLNKLLI-IFRYGM 711 (720)
Q Consensus 678 --D~~v~lWDv~tg~~~~~------v~~v~~~~~~~-~~~~~~ 711 (720)
.+.|..||..+++.... ..+++|++.+. ++..++
T Consensus 159 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~ 201 (333)
T 2dg1_A 159 NPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTET 201 (333)
T ss_dssp BCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEG
T ss_pred CCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeC
Confidence 24455556656554321 57889999985 444443
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=96.31 E-value=0.02 Score=58.85 Aligned_cols=94 Identities=10% Similarity=0.092 Sum_probs=66.0
Q ss_pred CCeEEEEECCCCCE-EEEeeCCCcEEEeeCC--cccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 608 NLVCSLSFDRDGEL-FAAAGVNKKIKVFECD--AIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 608 ~~V~sv~f~~dg~~-lat~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~~-~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
...+.++|+|||+. +++.+.+++|.+||+. ++.- .. ...+..+.. ......+++.+++ ++.++...++.|.+
T Consensus 149 ~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~--~~-~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~v~~ 224 (297)
T 3g4e_A 149 DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQI--SN-RRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNGGRVIR 224 (297)
T ss_dssp SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCE--EE-EEEEEECCGGGCEEEEEEEBTTS-CEEEEEETTTEEEE
T ss_pred ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcc--cC-cEEEEECCCCCCCCCeeEECCCC-CEEEEEcCCCEEEE
Confidence 45689999999985 5677778999999974 2210 00 011222221 3457899999965 67677666788999
Q ss_pred EECCCCcEEEE-------EEEEeec-CCce
Q 004998 684 GQVLHLIYFSA-------LYCIVLN-KLLI 705 (720)
Q Consensus 684 WDv~tg~~~~~-------v~~v~~~-~~~~ 705 (720)
||..+|+.+.+ ++|++|. +.+.
T Consensus 225 ~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~ 254 (297)
T 3g4e_A 225 LDPVTGKRLQTVKLPVDKTTSCCFGGKNYS 254 (297)
T ss_dssp ECTTTCCEEEEEECSSSBEEEEEEESGGGC
T ss_pred EcCCCceEEEEEECCCCCceEEEEeCCCCC
Confidence 99999998776 7899997 5543
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=96.27 E-value=0.016 Score=59.38 Aligned_cols=82 Identities=9% Similarity=-0.115 Sum_probs=62.7
Q ss_pred CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCC--CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-
Q 004998 618 DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASR--SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA- 694 (720)
Q Consensus 618 dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~--~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~- 694 (720)
.|++|++++.|++|.+||.+++ ..+..+... ..+.++.+.|+ +++|+ ++++.|..||. +|+.+-+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG--------~~~w~~~~~~~~~~~~~~~~pd-G~ilv--s~~~~V~~~d~-~G~~~W~~ 71 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTK--------EIVWEYPLEKGWECNSVAATKA-GEILF--SYSKGAKMITR-DGRELWNI 71 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTT--------EEEEEEECCTTCCCCEEEECTT-SCEEE--ECBSEEEEECT-TSCEEEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCC--------eEEEEeCCCccCCCcCeEECCC-CCEEE--eCCCCEEEECC-CCCEEEEE
Confidence 4689999999999999998776 245555443 36889999996 46888 45788999999 8887665
Q ss_pred -------EEEEeecCCceEEEecC
Q 004998 695 -------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 695 -------v~~v~~~~~~~~~~~~~ 711 (720)
+.++.+.+.+.++..++
T Consensus 72 ~~~~~~~~~~~~~~~dG~~lv~~~ 95 (276)
T 3no2_A 72 AAPAGCEMQTARILPDGNALVAWC 95 (276)
T ss_dssp ECCTTCEEEEEEECTTSCEEEEEE
T ss_pred cCCCCccccccEECCCCCEEEEec
Confidence 55677888887777654
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=96.23 E-value=0.027 Score=57.69 Aligned_cols=93 Identities=2% Similarity=-0.110 Sum_probs=69.5
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004998 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~ 687 (720)
.....+++.+||.++++.+.+++|.+||.. + ..+..+.......++...++ +++|++++.++.|..+|..
T Consensus 125 ~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G--------~~~w~~~~~~~~~~~~~~~~-g~~~v~~~~~~~v~~~d~~ 194 (276)
T 3no2_A 125 AQFRQINKNKKGNYLVPLFATSEVREIAPN-G--------QLLNSVKLSGTPFSSAFLDN-GDCLVACGDAHCFVQLNLE 194 (276)
T ss_dssp GSCSCCEECTTSCEEEEETTTTEEEEECTT-S--------CEEEEEECSSCCCEEEECTT-SCEEEECBTTSEEEEECTT
T ss_pred ccccCceECCCCCEEEEecCCCEEEEECCC-C--------CEEEEEECCCCccceeEcCC-CCEEEEeCCCCeEEEEeCc
Confidence 345667899999999999999999999976 5 24555554456677888885 5688888888899999999
Q ss_pred CCcEEEEE-------------EEEeecCCceEEEec
Q 004998 688 HLIYFSAL-------------YCIVLNKLLIIFRYG 710 (720)
Q Consensus 688 tg~~~~~v-------------~~v~~~~~~~~~~~~ 710 (720)
||+.+-++ .++..-+.+.+++..
T Consensus 195 tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 195 SNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp TCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred CCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 99986553 344555666665554
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=96.21 E-value=0.01 Score=64.12 Aligned_cols=92 Identities=16% Similarity=0.114 Sum_probs=64.1
Q ss_pred cccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEec--C
Q 004998 588 SFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMA--S 655 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~ 655 (720)
.-.++++++++..| ... . ++|+|||+++..++ .+.+|.+||..+.. ++.++. .
T Consensus 65 D~~t~~v~~~I~vG-----~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~--------v~~~I~v~~ 129 (386)
T 3sjl_D 65 DGEAGRVIGMIDGG-----FLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL--------PTADIELPD 129 (386)
T ss_dssp ETTTTEEEEEEEEC-----SSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--------EEEEEEETT
T ss_pred ECCCCeEEEEEECC-----CCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe--------EEEEEECCC
Confidence 34578888888753 222 4 99999999765554 46889999998762 233221 1
Q ss_pred ------CCCEEEEEEecCCCCEEEEEeC--CCcEEEEECCCCcEEEEE
Q 004998 656 ------RSKLSSICWNSYIKSQIASSNF--EGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 656 ------~~~i~~v~~~~~~~~~laS~s~--D~~v~lWDv~tg~~~~~v 695 (720)
...-..+.|+|+++ +|..+.. +++|.|+|+.+++.+.+|
T Consensus 130 g~r~~~g~~P~~~a~spDGk-~lyVan~~~~~~VsVID~~t~~vv~tI 176 (386)
T 3sjl_D 130 APRFLVGTYPWMTSLTPDGK-TLLFYQFSPAPAVGVVDLEGKAFKRML 176 (386)
T ss_dssp CCCCCBSCCGGGEEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred ccccccCCCCceEEEcCCCC-EEEEEEcCCCCeEEEEECCCCcEEEEE
Confidence 11345789999765 5555543 789999999999999885
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=96.03 E-value=0.04 Score=54.91 Aligned_cols=98 Identities=9% Similarity=0.056 Sum_probs=71.7
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004998 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~ 687 (720)
..+.+++|+++|.++++...+++|.+||..+.... .....+...+.+|+++|++ +++++...++.|.+||..
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~-------~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQT-------VLPFTGLNDPDGVAVDNSG-NVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCE-------ECCCCSCCSCCCEEECTTC-CEEEEEGGGTEEEEECTT
T ss_pred CCCcceEECCCCCEEEEECCCCEEEEEECCCceeE-------eeccccCCCceeEEEeCCC-CEEEEECCCCEEEEEecC
Confidence 56899999999999888888999999985543110 0011123457889999965 577777778999999998
Q ss_pred CCcEEEE-------EEEEeecCCceEEEecCcc
Q 004998 688 HLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 688 tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
++..... ..++++++.+.+++.+..+
T Consensus 180 ~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~ 212 (270)
T 1rwi_B 180 SNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNT 212 (270)
T ss_dssp TCCEEECCCSSCCSEEEEEECTTCCEEEEETTT
T ss_pred CCceEeecccCCCCceEEEECCCCCEEEEECCC
Confidence 7765432 6889999998887776543
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=96.01 E-value=0.027 Score=58.99 Aligned_cols=91 Identities=10% Similarity=-0.020 Sum_probs=65.8
Q ss_pred CeEEEEECCCCCEEEEeeCC----------CcEEEeeCCcccccccccccceEEe--cCCCCEEEEEEecCCCCEEEEEe
Q 004998 609 LVCSLSFDRDGELFAAAGVN----------KKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWNSYIKSQIASSN 676 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~i~~v~~~~~~~~~laS~s 676 (720)
....++|+|||++++++..+ ++|.+||..+.. .+..+ ........++|+|+++ .|..++
T Consensus 173 ~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~--------v~~~~~~~~g~~p~~la~~~d~~-~lyv~~ 243 (328)
T 3dsm_A 173 QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFT--------VEKQFKFKLGDWPSEVQLNGTRD-TLYWIN 243 (328)
T ss_dssp CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTE--------EEEEEECCTTCCCEEEEECTTSC-EEEEES
T ss_pred CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCe--------EEEEEecCCCCCceeEEEecCCC-EEEEEc
Confidence 35688999999988887655 899999987651 11122 1123678999999655 666555
Q ss_pred CCCcEEEEECCCCcEEE---------EEEEEeecC-CceEEEec
Q 004998 677 FEGVVQVGQVLHLIYFS---------ALYCIVLNK-LLIIFRYG 710 (720)
Q Consensus 677 ~D~~v~lWDv~tg~~~~---------~v~~v~~~~-~~~~~~~~ 710 (720)
. +|.+||+.+++... ..++++++| .+.+++.+
T Consensus 244 ~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 244 N--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp S--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred c--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 4 89999999887531 268899998 77777776
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=95.96 E-value=0.032 Score=56.99 Aligned_cols=101 Identities=7% Similarity=-0.104 Sum_probs=67.6
Q ss_pred CCeEEEEECCCCCEEEE-------eeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 608 NLVCSLSFDRDGELFAA-------AGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat-------~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
....+++|+++|.++++ +..++.|.+||..+...... ..|- .......+.+++|+++.+.++++.. ++.
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~--~~~~-~~~~~~~~~~i~~~~~~g~l~v~~~-~~~ 93 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVI--CKPE-VNGYGGIPAGCQCDRDANQLFVADM-RLG 93 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEE--ECCE-ETTEECCEEEEEECSSSSEEEEEET-TTE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEE--Eecc-cCCCCCCCceEEEecCCCcEEEEEC-CCC
Confidence 45789999999999888 77899999999765421100 0000 0001356899999996344444443 457
Q ss_pred EEEEECCCCcEEEE------------EEEEeecCCceEEEecCcc
Q 004998 681 VQVGQVLHLIYFSA------------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 681 v~lWDv~tg~~~~~------------v~~v~~~~~~~~~~~~~~~ 713 (720)
|.+||.. |+.... ++++++.+.+.+...++-+
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 137 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAG 137 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBC
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCc
Confidence 8899988 765322 5788999998888776643
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=95.91 E-value=0.052 Score=57.08 Aligned_cols=87 Identities=9% Similarity=-0.017 Sum_probs=57.1
Q ss_pred CCCCCeEEEEECCCCCEEEEeeC-----CCcEEEeeCCccc-ccccccccceEEecCCCCEEEEEEecCCCCEEEEEe--
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGV-----NKKIKVFECDAII-NENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-- 676 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~-----d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s-- 676 (720)
++-..+.+|+|+++|.++++... +.+|.+||+.+.. ........++ ....+.+..|+++|.++...++-+
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~--~~~~~~~~~v~vd~~~g~~yvtd~~~ 141 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPI--TLSNSFVNDLAVDLIHNFVYISDPAP 141 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTT--SCTTCCCCEEEEETTTTEEEEEECCS
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhh--cccccccceEEEecCCCEEEEEcCcc
Confidence 45678999999999998766543 6899999987652 0000000000 011345789999986554555554
Q ss_pred -CCCcEEEEECCCCcEEE
Q 004998 677 -FEGVVQVGQVLHLIYFS 693 (720)
Q Consensus 677 -~D~~v~lWDv~tg~~~~ 693 (720)
.++.|.+||..+|+..+
T Consensus 142 ~~~~~i~v~d~~~g~~~r 159 (343)
T 2qe8_A 142 DDKAALIRVDLQTGLAAR 159 (343)
T ss_dssp GGGCEEEEEETTTCCEEE
T ss_pred CCCCeEEEEECCCCCEEE
Confidence 68899999998876543
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=95.85 E-value=0.033 Score=59.74 Aligned_cols=88 Identities=3% Similarity=-0.113 Sum_probs=62.0
Q ss_pred eEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeC-C
Q 004998 610 VCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF-E 678 (720)
Q Consensus 610 V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~-D 678 (720)
..-++|+|||..+-.+. .++.|-|+|..+. ..+..+.......++.|+|+++.+|+++.+ +
T Consensus 269 ~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~--------~vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~ 340 (373)
T 2mad_H 269 WQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG--------QTSSQISLGHDVDAISVAQDGGPDLYALSAGT 340 (373)
T ss_pred eEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC--------EEEEEEECCCCcCeEEECCCCCeEEEEEcCCC
Confidence 44578999998643332 2468999998776 234444444467899999987657778774 8
Q ss_pred CcEEEEECCCCcEEEEEEEEeecCCce
Q 004998 679 GVVQVGQVLHLIYFSALYCIVLNKLLI 705 (720)
Q Consensus 679 ~~v~lWDv~tg~~~~~v~~v~~~~~~~ 705 (720)
++|.|||+.|++.+.++-.+.-+|.+.
T Consensus 341 ~~V~ViD~~t~~vv~~i~~vG~~P~~~ 367 (373)
T 2mad_H 341 EVLHIYDAGAGDQDQSTVELGSGPQVL 367 (373)
T ss_pred CeEEEEECCCCCEEeeecCCCCCCcEE
Confidence 999999999999998754444445443
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=95.80 E-value=0.036 Score=63.09 Aligned_cols=86 Identities=6% Similarity=-0.095 Sum_probs=65.8
Q ss_pred ECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECC--CCcEE
Q 004998 615 FDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVL--HLIYF 692 (720)
Q Consensus 615 f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~--tg~~~ 692 (720)
.+|++.++++...+++|.|||..+. ..+..+.....+.++.|+|++ .+|..++.|+.|.+||+. +++.+
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~--------~v~~~i~~g~~p~~v~~SpDG-r~lyv~~~dg~V~viD~~~~t~~~v 233 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTY--------EIKTVLDTGYAVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTTV 233 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTC--------CEEEEEECSSCEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCEE
T ss_pred cCCCceEEEEeCCCCeEEEEECCCC--------eEEEEEeCCCCccceEECCCC-CEEEEEcCCCeEEEEECCCCCCcEe
Confidence 4566678899999999999998776 233444444567799999965 578888899999999996 88888
Q ss_pred EEE------EEEeec----CCceEEEe
Q 004998 693 SAL------YCIVLN----KLLIIFRY 709 (720)
Q Consensus 693 ~~v------~~v~~~----~~~~~~~~ 709 (720)
.+| ..++|+ |.+..+.-
T Consensus 234 ~~i~~G~~P~~ia~s~~~~pDGk~l~v 260 (567)
T 1qks_A 234 AEIKIGSEARSIETSKMEGWEDKYAIA 260 (567)
T ss_dssp EEEECCSEEEEEEECCSTTCTTTEEEE
T ss_pred EEEecCCCCceeEEccccCCCCCEEEE
Confidence 774 678899 57755443
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=95.68 E-value=0.082 Score=56.63 Aligned_cols=90 Identities=12% Similarity=0.015 Sum_probs=62.2
Q ss_pred cccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEecC--
Q 004998 588 SFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMAS-- 655 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-- 655 (720)
...+++++.++..| .. ..++|+|||+++..+. .+.+|.+||..+.. ++.++..
T Consensus 53 D~~t~~~~~~i~~g-----~~--p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~--------~~~~i~~~~ 117 (373)
T 2mad_H 53 DAGSGSILGHVNGG-----FL--PNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL--------PIADIELPD 117 (373)
T ss_pred ECCCCeEEEEecCC-----CC--CCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc--------EEEEEECCC
Confidence 34577788888753 12 2899999999877765 37889999987651 2222111
Q ss_pred ------CCCEEEEEEecCCCCEEEEEeC--CCcEEEEECCCCcEEEE
Q 004998 656 ------RSKLSSICWNSYIKSQIASSNF--EGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 656 ------~~~i~~v~~~~~~~~~laS~s~--D~~v~lWDv~tg~~~~~ 694 (720)
...-..+.|+|+++ +|+.+.. +++|.++| .+++.+.+
T Consensus 118 ~~~~~~g~~p~~~~~spDG~-~l~v~n~~~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 118 APRFDVGPYSWMNANTPNNA-DLLFFQFAAGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred ccccccCCCccceEECCCCC-EEEEEecCCCCeEEEEE-CCCCEEeE
Confidence 12235789999765 6665553 58899999 99998877
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=95.52 E-value=0.017 Score=58.44 Aligned_cols=94 Identities=9% Similarity=-0.050 Sum_probs=60.7
Q ss_pred ehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc---
Q 004998 66 SDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ--- 140 (720)
Q Consensus 66 ~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~--- 140 (720)
+|...|..+. +--|.+++. +..++. ..|+|||+ .|.++.+..... ......+..++...|..||+.
T Consensus 68 ~E~~~l~~l~~~vPVP~v~~-~~~~~~---~~~lvme~l~G~~~~~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~ 138 (272)
T 4gkh_A 68 DEMVRLNWLTAFMPLPTIKH-FIRTPD---DAWLLTTAIPGKTAFQVLEEY-----PDSGENIVDALAVFLRRLHSIPVC 138 (272)
T ss_dssp HHHHHHHHHTTTSCCCCEEE-EEEETT---EEEEEEECCCSEEHHHHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGG
T ss_pred HHHHHHHHhccCCCcCeEEE-EEEECC---eEEEEEEeeCCccccccccCC-----HHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4555555442 111345555 333442 56999999 888887765221 122334566666666666631
Q ss_pred -------------------------------------------------------CceeccCCCCcEEEccCCceEEecc
Q 004998 141 -------------------------------------------------------GIVVHNVRPSCFVMSSFNHVSFIES 165 (720)
Q Consensus 141 -------------------------------------------------------gIvHrDLKP~NILl~~~~~vkliDf 165 (720)
.++|+|+.|.|||++..+.+-|+||
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDw 218 (272)
T 4gkh_A 139 NCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDV 218 (272)
T ss_dssp GCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCC
T ss_pred cCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEEC
Confidence 2789999999999987766779999
Q ss_pred Ccc
Q 004998 166 ASC 168 (720)
Q Consensus 166 g~a 168 (720)
+.+
T Consensus 219 e~a 221 (272)
T 4gkh_A 219 GRV 221 (272)
T ss_dssp TTC
T ss_pred ccc
Confidence 887
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=95.48 E-value=0.0081 Score=63.77 Aligned_cols=30 Identities=10% Similarity=0.180 Sum_probs=25.1
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCccc
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCS 169 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~ 169 (720)
..++|+|++|.|||++..+.+.|+||+.+.
T Consensus 222 ~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~ 251 (357)
T 3ats_A 222 PVLLWGDARVGNVLYRDFQPVAVLDWEMVA 251 (357)
T ss_dssp CEEECSSCSGGGEEEETTEEEEECCGGGCE
T ss_pred ceEEeCCCCCCeEEEeCCcEEEEEcccccc
Confidence 468999999999999864457899998873
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=95.46 E-value=0.12 Score=56.01 Aligned_cols=93 Identities=9% Similarity=0.009 Sum_probs=65.6
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCC--cEEEEE
Q 004998 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEG--VVQVGQ 685 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~--~v~lWD 685 (720)
+....|+|+++|.++++...+++|++||..+.. ............ ++|+|++ +.|+.++.++ .|.+||
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~--------~~~~~~~~~~~~-ia~~~~g-~~l~~~d~~~~~~I~~~d 200 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNK--------VTTVHPGFKGGK-PAVTKDK-QRVYSIGWEGTHTVYVYM 200 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTE--------EEEEEETCCBCB-CEECTTS-SEEEEEBSSTTCEEEEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCE--------EEEeeccCCCCc-eeEecCC-CcEEEEecCCCceEEEEE
Confidence 468899999999999998889999999987541 111111122233 9999964 5888888876 788888
Q ss_pred CCCCcEEEE-----------EEEEeecC-CceEEEec
Q 004998 686 VLHLIYFSA-----------LYCIVLNK-LLIIFRYG 710 (720)
Q Consensus 686 v~tg~~~~~-----------v~~v~~~~-~~~~~~~~ 710 (720)
..++..... .+++++++ .+.++...
T Consensus 201 ~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d 237 (409)
T 3hrp_A 201 KASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVD 237 (409)
T ss_dssp GGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEEC
T ss_pred cCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEE
Confidence 876654322 46888988 66666643
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=95.46 E-value=0.26 Score=49.39 Aligned_cols=97 Identities=12% Similarity=-0.023 Sum_probs=69.2
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~lW 684 (720)
+.+.+.+|+++++|.++++...++.|.+||.. ... ..... .....+.+|++++++ .+.++...++.|..|
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-------~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~ 83 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-------TEYPLPTPDAKVMCLTISSDG-EVWFTENAANKIGRI 83 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-------EEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEE
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-------EEecCCcccCceeeEEECCCC-CEEEeCCCCCeEEEE
Confidence 35789999999999998887778999999976 310 00011 124578999999864 577776668899999
Q ss_pred ECCCCcEEE--------EEEEEeecCCceEEEecCc
Q 004998 685 QVLHLIYFS--------ALYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 685 Dv~tg~~~~--------~v~~v~~~~~~~~~~~~~~ 712 (720)
|.. |+... .+.++++.+.+.+...+..
T Consensus 84 ~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 118 (299)
T 2z2n_A 84 TKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN 118 (299)
T ss_dssp CTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT
T ss_pred CCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecC
Confidence 986 44211 1678889888887776543
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=95.35 E-value=0.037 Score=59.38 Aligned_cols=75 Identities=5% Similarity=-0.128 Sum_probs=53.3
Q ss_pred EEECCCCCEEE-Eee---C-----CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEe-CCCcEE
Q 004998 613 LSFDRDGELFA-AAG---V-----NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN-FEGVVQ 682 (720)
Q Consensus 613 v~f~~dg~~la-t~~---~-----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s-~D~~v~ 682 (720)
++|+|||+.+- +.. . +..+.|||+.+.. .+..+.......+++|+|+++..+++.. .+++|.
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~--------vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~Vs 340 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ--------TSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLD 340 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC--------EEECCEEEEEECEEEECCSSSCEEEEEETTTTEEE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe--------EEEEEECCCCcceEEECCCCCEEEEEccCCCCeEE
Confidence 68999998643 322 1 2345599988762 1222221224789999998777788888 599999
Q ss_pred EEECCCCcEEEEE
Q 004998 683 VGQVLHLIYFSAL 695 (720)
Q Consensus 683 lWDv~tg~~~~~v 695 (720)
|||+.|++.+.+|
T Consensus 341 VID~~t~kvv~~I 353 (368)
T 1mda_H 341 IYDAASDQDQSSV 353 (368)
T ss_dssp EEESSSCEEEEEC
T ss_pred EEECCCCcEEEEE
Confidence 9999999999884
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=95.24 E-value=0.33 Score=48.56 Aligned_cols=96 Identities=14% Similarity=-0.030 Sum_probs=69.8
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+|+++++|.++++...++.|.+||..... ....+. ....+.++++.|++ .+.++...++.|.+||
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~--------~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d 126 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKGII--------KEYTLPNPDSAPYGITEGPNG-DIWFTEMNGNRIGRIT 126 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCE--------EEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEEC
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCCcE--------EEEeCCCcCCCceeeEECCCC-CEEEEecCCceEEEEC
Confidence 4679999999999998888778999999965211 011111 24568999999854 5777777788999999
Q ss_pred CCCCcEEEE--------EEEEeecCCceEEEecCc
Q 004998 686 VLHLIYFSA--------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 686 v~tg~~~~~--------v~~v~~~~~~~~~~~~~~ 712 (720)
. +|+.... +.++++.+.+.++..+..
T Consensus 127 ~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 160 (299)
T 2z2n_A 127 D-DGKIREYELPNKGSYPSFITLGSDNALWFTENQ 160 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETT
T ss_pred C-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCC
Confidence 9 6654432 678888888877776543
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=95.13 E-value=0.24 Score=50.62 Aligned_cols=93 Identities=11% Similarity=-0.085 Sum_probs=67.7
Q ss_pred CCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 607 SNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
...-.+..|+++ +.++.+...+++|..||..+.. +........+.+++|+|++. ++++. ++.|.+||
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~---------~~~~~~~~~~~~i~~~~dG~-l~v~~--~~~l~~~d 79 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQ---------VQRVTMDAPVSSVALRQSGG-YVATI--GTKFCALN 79 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCC---------EEEEECSSCEEEEEEBTTSS-EEEEE--TTEEEEEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCc---------EEEEeCCCceEEEEECCCCC-EEEEE--CCeEEEEE
Confidence 356678999995 5577888889999999987652 11222346799999999754 66554 57899999
Q ss_pred CCCCcEEE-----------EEEEEeecCCceEEEecC
Q 004998 686 VLHLIYFS-----------ALYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 686 v~tg~~~~-----------~v~~v~~~~~~~~~~~~~ 711 (720)
..+|+... .++.+++.+.+.+....+
T Consensus 80 ~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~ 116 (297)
T 3g4e_A 80 WKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTM 116 (297)
T ss_dssp TTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEE
T ss_pred CCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecC
Confidence 99886432 167789999998777654
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=95.13 E-value=0.12 Score=59.87 Aligned_cols=96 Identities=5% Similarity=-0.176 Sum_probs=61.0
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCC----cEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeC---C
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVNK----KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF---E 678 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~---D 678 (720)
+...+.+++|+|||++||.++.++ .|.+||..+. .+.....+...+....| ++++ ++++++. +
T Consensus 225 ~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~--------~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~ 294 (695)
T 2bkl_A 225 DPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK--------DFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPR 294 (695)
T ss_dssp CTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS--------SCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTT
T ss_pred CCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC--------ceEEeecCCCceEEEEe-cCCc-EEEEECCCCCC
Confidence 456899999999999988887776 5666654322 12222233445566667 5566 7777663 5
Q ss_pred CcEEEEECCCCcE-----EE------EEEEEeecCCceEEEecCc
Q 004998 679 GVVQVGQVLHLIY-----FS------ALYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 679 ~~v~lWDv~tg~~-----~~------~v~~v~~~~~~~~~~~~~~ 712 (720)
+.|.+||+.+++. +. .+..++|+ .+.++.+.+-
T Consensus 295 ~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~ 338 (695)
T 2bkl_A 295 QRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLK 338 (695)
T ss_dssp CEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEE
T ss_pred CEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEE
Confidence 8999999988752 21 15667776 4444544443
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=95.07 E-value=0.1 Score=53.08 Aligned_cols=74 Identities=19% Similarity=0.165 Sum_probs=54.7
Q ss_pred CCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004998 608 NLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv 686 (720)
..+..++++++|.++++...++.|.+||..+.. .+..+. +...+.+++|+|++..+.+++..++.|..||+
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~--------~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ--------PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS--------CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCc--------EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 567899999999999888889999999976441 111222 23578999999865435556666789999998
Q ss_pred CCC
Q 004998 687 LHL 689 (720)
Q Consensus 687 ~tg 689 (720)
.+.
T Consensus 298 ~~~ 300 (314)
T 1pjx_A 298 QRN 300 (314)
T ss_dssp SSC
T ss_pred CCC
Confidence 753
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=95.02 E-value=0.13 Score=59.87 Aligned_cols=106 Identities=6% Similarity=-0.123 Sum_probs=63.8
Q ss_pred CCCCeEEEEECCCCCEEEEeeC-----CCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCC-
Q 004998 606 SSNLVCSLSFDRDGELFAAAGV-----NKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE- 678 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D- 678 (720)
|...+.+++|+|||++|+.++. +..|.+||+.+..... ....++..+ .+...+.. .|+|+++.++.++..+
T Consensus 231 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~-~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~ 308 (710)
T 2xdw_A 231 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGI-TGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHS 308 (710)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSS-CSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTC
T ss_pred CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccccc-CCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCC
Confidence 4567889999999999887765 6789999986510000 000012222 23334444 5888665444444433
Q ss_pred --CcEEEEECCCCc-----EEE------EEEEEeecCCceEEEecCcc
Q 004998 679 --GVVQVGQVLHLI-----YFS------ALYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 679 --~~v~lWDv~tg~-----~~~------~v~~v~~~~~~~~~~~~~~~ 713 (720)
+.|.+||+.+++ .+. .+.+++|++.+.++.+.+-|
T Consensus 309 ~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~ 356 (710)
T 2xdw_A 309 PNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHD 356 (710)
T ss_dssp TTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEET
T ss_pred CCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEEC
Confidence 369999998873 222 26678888666665555433
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=94.89 E-value=0.19 Score=52.24 Aligned_cols=92 Identities=10% Similarity=-0.121 Sum_probs=65.1
Q ss_pred CCeEEEEECCCC-CEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004998 608 NLVCSLSFDRDG-ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 608 ~~V~sv~f~~dg-~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv 686 (720)
....+.+|+|++ .++.++..++.|.+||..+.. +........+.+++|+|++ .+++++ .+ .|.+||.
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~---------~~~~~~~~~v~~i~~~~dg-~l~v~~-~~-gl~~~d~ 116 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGR---------KTVHALPFMGSALAKISDS-KQLIAS-DD-GLFLRDT 116 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTE---------EEEEECSSCEEEEEEEETT-EEEEEE-TT-EEEEEET
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCc---------EEEEECCCcceEEEEeCCC-eEEEEE-CC-CEEEEEC
Confidence 346788999985 567777788999999987641 1112224579999999964 466554 34 4999999
Q ss_pred CCCcEEE-----------EEEEEeecCCceEEEecC
Q 004998 687 LHLIYFS-----------ALYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 687 ~tg~~~~-----------~v~~v~~~~~~~~~~~~~ 711 (720)
.+|+... .++++++++.+.+...++
T Consensus 117 ~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~ 152 (326)
T 2ghs_A 117 ATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTM 152 (326)
T ss_dssp TTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEE
T ss_pred CCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeC
Confidence 8887432 267889999988776543
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=94.50 E-value=0.3 Score=49.75 Aligned_cols=92 Identities=7% Similarity=0.024 Sum_probs=62.7
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeC--CCcEEEeeCCcccccccccccceEEe--cCCCCEEEEEEe
Q 004998 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGV--NKKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWN 665 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~i~~v~~~ 665 (720)
.+.++++++.|+ .......++|++||.++++.|. +.+|+++|+.++. .+..+ ..+...-.+++.
T Consensus 7 ~~~~vv~~~p~~----~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~--------v~~~i~l~~~~fgeGi~~~ 74 (266)
T 2iwa_A 7 YIVEVLNEFPHD----PYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGK--------VENIHKMDDSYFGEGLTLL 74 (266)
T ss_dssp EEEEEEEEEECC----TTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCC--------EEEEEECCTTCCEEEEEEE
T ss_pred cCceEEEEEECC----CCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCC--------EEEEEecCCCcceEEEEEe
Confidence 357899999873 1245789999999988777765 6899999998762 12221 122223355665
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Q 004998 666 SYIKSQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 666 ~~~~~~laS~s~D~~v~lWDv~tg~~~~~v 695 (720)
. +.+.++.-.+++|-++|..|++.+.++
T Consensus 75 g--~~lyv~t~~~~~v~viD~~t~~v~~~i 102 (266)
T 2iwa_A 75 N--EKLYQVVWLKNIGFIYDRRTLSNIKNF 102 (266)
T ss_dssp T--TEEEEEETTCSEEEEEETTTTEEEEEE
T ss_pred C--CEEEEEEecCCEEEEEECCCCcEEEEE
Confidence 3 333344446899999999999988875
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=94.47 E-value=0.45 Score=49.39 Aligned_cols=94 Identities=10% Similarity=-0.008 Sum_probs=62.0
Q ss_pred CCeEEEEECCCCCEE-EEeeCCCcEEEeeCC--cccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 608 NLVCSLSFDRDGELF-AAAGVNKKIKVFECD--AIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 608 ~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
...+.++|+|||+.+ ++.+.++.|.+||+. ++.. ... ...+..+. .......+++.+++ ++.++...++.|.+
T Consensus 179 ~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~-~~~-~~~~~~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~ 255 (326)
T 2ghs_A 179 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLP-TGK-AEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDR 255 (326)
T ss_dssp SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCB-SSC-CEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEE
T ss_pred cccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCc-ccC-ceEEEECCCCCCCCCeeEECCCC-CEEEEEeCCCEEEE
Confidence 457899999999865 555667899999975 3200 000 01112222 13456789999865 56666655688999
Q ss_pred EECCCCcEEEE-------EEEEeec-CCce
Q 004998 684 GQVLHLIYFSA-------LYCIVLN-KLLI 705 (720)
Q Consensus 684 WDv~tg~~~~~-------v~~v~~~-~~~~ 705 (720)
||. +|+.+.+ +++++|+ +.+.
T Consensus 256 ~d~-~g~~~~~i~~~~~~~~~~af~g~d~~ 284 (326)
T 2ghs_A 256 YDT-DGNHIARYEVPGKQTTCPAFIGPDAS 284 (326)
T ss_dssp ECT-TCCEEEEEECSCSBEEEEEEESTTSC
T ss_pred ECC-CCCEEEEEECCCCCcEEEEEecCCCC
Confidence 999 6776654 7899997 6653
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=94.41 E-value=0.11 Score=56.68 Aligned_cols=93 Identities=17% Similarity=0.110 Sum_probs=64.7
Q ss_pred cccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEecC--
Q 004998 588 SFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMAS-- 655 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-- 655 (720)
.-.++++++++.-|. .. .++|+|||+++..+. .+++|.++|..+.. .+..+.-
T Consensus 105 D~~t~~vv~~I~vG~-----~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~--------vv~~I~v~g 169 (426)
T 3c75_H 105 DGSTGRILGMTDGGF-----LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL--------PIADIELPD 169 (426)
T ss_dssp ETTTTEEEEEEEECS-----SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--------EEEEEEETT
T ss_pred ECCCCEEEEEEECCC-----CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc--------EEEEEECCC
Confidence 346788899988542 23 799999999765554 47799999988762 2222210
Q ss_pred ------CCCEEEEEEecCCCCEEEEEeC--CCcEEEEECCCCcEEEEEE
Q 004998 656 ------RSKLSSICWNSYIKSQIASSNF--EGVVQVGQVLHLIYFSALY 696 (720)
Q Consensus 656 ------~~~i~~v~~~~~~~~~laS~s~--D~~v~lWDv~tg~~~~~v~ 696 (720)
...-..+.|+|+++ +|..+.. +++|.|.|+.+++.+.+|.
T Consensus 170 ~~r~~~g~~P~~~~~spDGk-~lyV~n~~~~~~VsVID~~t~kvv~~I~ 217 (426)
T 3c75_H 170 APRFLVGTYQWMNALTPDNK-NLLFYQFSPAPAVGVVDLEGKTFDRMLD 217 (426)
T ss_dssp CCCCCBSCCGGGSEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEEEE
T ss_pred ccccccCCCcceEEEcCCCC-EEEEEecCCCCeEEEEECCCCeEEEEEE
Confidence 11234679999765 5655553 6899999999999988743
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=94.25 E-value=0.36 Score=49.37 Aligned_cols=92 Identities=5% Similarity=-0.071 Sum_probs=66.2
Q ss_pred CCCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 607 SNLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
..+..+..|+|||+ ++.++..++.|..||..... .........+..++|++++ .++++...++.|.+||
T Consensus 44 ~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~---------~~~~~~~~~~~gl~~d~dG-~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 44 ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTV---------DVLLDATAFTNGNAVDAQQ-RLVHCEHGRRAITRSD 113 (305)
T ss_dssp CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCE---------EEEEESCSCEEEEEECTTS-CEEEEETTTTEEEEEC
T ss_pred CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCE---------EEEeCCCCccceeeECCCC-CEEEEECCCCEEEEEC
Confidence 56788999999998 67888888999999863211 1111234568999999965 4666655568899999
Q ss_pred CCCCcEEEE-----------EEEEeecCCceEEEe
Q 004998 686 VLHLIYFSA-----------LYCIVLNKLLIIFRY 709 (720)
Q Consensus 686 v~tg~~~~~-----------v~~v~~~~~~~~~~~ 709 (720)
.. |+...- ++.+++.+.+.+..+
T Consensus 114 ~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~t 147 (305)
T 3dr2_A 114 AD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFT 147 (305)
T ss_dssp TT-SCEEEEECEETTEECSCCCCEEECTTSCEEEE
T ss_pred CC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEe
Confidence 86 653221 346899999998886
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=94.20 E-value=0.88 Score=45.35 Aligned_cols=96 Identities=11% Similarity=-0.037 Sum_probs=69.3
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+|+++++|.++++...++.|.+||.. ..-. ...+. ....+.++++.+++ ++.++...++.|.+||
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-------~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~v~~~d 89 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-------EFEVPTPDAKVMCLIVSSLG-DIWFTENGANKIGKLS 89 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-------EEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEEC
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE-------EEECCCCCCcceeEEECCCC-CEEEEecCCCeEEEEC
Confidence 4678999999999998888788999999976 2100 01111 23568999999854 5666666678999999
Q ss_pred CCCCcEEEE--------EEEEeecCCceEEEecCc
Q 004998 686 VLHLIYFSA--------LYCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 686 v~tg~~~~~--------v~~v~~~~~~~~~~~~~~ 712 (720)
.. |+.... +.++++.+.+.++..+..
T Consensus 90 ~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 123 (300)
T 2qc5_A 90 KK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN 123 (300)
T ss_dssp TT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred CC-CCeEEecCCCCCCCCccceECCCCCEEEEccC
Confidence 88 654321 678888888887776653
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=94.18 E-value=0.21 Score=52.35 Aligned_cols=102 Identities=7% Similarity=0.003 Sum_probs=63.5
Q ss_pred CeEEEEECCCCCEEEEeeCCC-cEEEeeCCcccccc---cccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004998 609 LVCSLSFDRDGELFAAAGVNK-KIKVFECDAIINEN---RDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~~d~-~i~iwd~~~~~~~~---~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lW 684 (720)
.++.|+|+|||++|..+..++ +|..+|........ ......+....+......++++++ +++.++...++.|.+|
T Consensus 196 ~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~-G~l~va~~~~~~V~~~ 274 (343)
T 2qe8_A 196 GVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKD-HNIYVGDLAHSAIGVI 274 (343)
T ss_dssp CEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTT-CCEEEEEGGGTEEEEE
T ss_pred ccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCC-CCEEEEccCCCeEEEE
Confidence 478999999999877776665 44444422111100 000011122222334567899996 5677787778999999
Q ss_pred ECCCCcEEEE--------EEEEeecCCceEEEecC
Q 004998 685 QVLHLIYFSA--------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 685 Dv~tg~~~~~--------v~~v~~~~~~~~~~~~~ 711 (720)
|..+|+.... ..+|+|.+.+.+++..+
T Consensus 275 d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 275 TSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp ETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred ECCCCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 9967763221 56889988887776654
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=94.10 E-value=0.056 Score=56.42 Aligned_cols=29 Identities=3% Similarity=0.102 Sum_probs=26.9
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcc
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
.+++|+|++|.|||++.++.+.++||+.+
T Consensus 222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a 250 (346)
T 2q83_A 222 PNLCHQDYGTGNTLLGENEQIWVIDLDTV 250 (346)
T ss_dssp CCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred CceecCCCCcccEEEeCCCcEEEEehhhc
Confidence 68999999999999988889999999977
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=93.96 E-value=0.72 Score=46.65 Aligned_cols=91 Identities=9% Similarity=0.148 Sum_probs=58.4
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCC--cEEEeeCCcccccccccccceEEecCCCCE--EEEEEe
Q 004998 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEMASRSKL--SSICWN 665 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i--~~v~~~ 665 (720)
...+++++..| +.......+.|+ |+.++.++|.++ +|+++|++++. .+....-.... -.+...
T Consensus 29 ~~~~vv~~~ph----d~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgk--------v~~~~~l~~~~FgeGit~~ 95 (262)
T 3nol_A 29 YDYQIVHSYPH----DTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGK--------TLQQIELGKRYFGEGISDW 95 (262)
T ss_dssp EEEEEEEEEEC----CTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCC--------EEEEEECCTTCCEEEEEEE
T ss_pred cceEEEEEecC----CCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCc--------EEEEEecCCccceeEEEEe
Confidence 35688888876 234667889999 788888888876 99999998862 11111111122 223333
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Q 004998 666 SYIKSQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 666 ~~~~~~laS~s~D~~v~lWDv~tg~~~~~v 695 (720)
+..+....-.++++-++|..|++.+.++
T Consensus 96 --g~~ly~ltw~~~~v~v~D~~t~~~~~ti 123 (262)
T 3nol_A 96 --KDKIVGLTWKNGLGFVWNIRNLRQVRSF 123 (262)
T ss_dssp --TTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred --CCEEEEEEeeCCEEEEEECccCcEEEEE
Confidence 2223333334788888888888888774
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=93.79 E-value=0.09 Score=57.45 Aligned_cols=84 Identities=5% Similarity=0.033 Sum_probs=58.7
Q ss_pred EEEECCCCCE-EEEee---------CCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeC-CCc
Q 004998 612 SLSFDRDGEL-FAAAG---------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNF-EGV 680 (720)
Q Consensus 612 sv~f~~dg~~-lat~~---------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~-D~~ 680 (720)
.++|+|||.. +++.+ .+++|-|+|..+.. .+..+.-...-..|.|+|+++.+|+++.+ +++
T Consensus 323 ~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k--------vv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~ 394 (426)
T 3c75_H 323 QTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE--------RINKIELGHEIDSINVSQDAEPLLYALSAGTQT 394 (426)
T ss_dssp CEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC--------EEEEEEEEEEECEEEECCSSSCEEEEEETTTTE
T ss_pred eeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe--------EEEEEECCCCcCeEEEccCCCEEEEEEcCCCCe
Confidence 3689999875 44432 24589999988762 23333222347899999976547888884 999
Q ss_pred EEEEECCCCcEEEEEEEEeecCC
Q 004998 681 VQVGQVLHLIYFSALYCIVLNKL 703 (720)
Q Consensus 681 v~lWDv~tg~~~~~v~~v~~~~~ 703 (720)
|.|+|+.|++.+.+|-.+.-.|.
T Consensus 395 VsVID~~t~kvv~tI~~vG~~P~ 417 (426)
T 3c75_H 395 LHIYDAATGEELRSVDQLGRGPQ 417 (426)
T ss_dssp EEEEETTTCCEEEEECCCSSSCC
T ss_pred EEEEECCCCCEEEEecCCCCCCc
Confidence 99999999999988633444444
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=93.51 E-value=0.15 Score=59.93 Aligned_cols=93 Identities=12% Similarity=-0.047 Sum_probs=60.7
Q ss_pred CeEEEEEC-CCCCEEEEeeC-----CCcEEEeeCCcc-cccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCC---
Q 004998 609 LVCSLSFD-RDGELFAAAGV-----NKKIKVFECDAI-INENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE--- 678 (720)
Q Consensus 609 ~V~sv~f~-~dg~~lat~~~-----d~~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D--- 678 (720)
.+.+.+|| |||++||-+.. ..+|+|+|+.++ .. +...+.. ....++|+|+++ .|+-+++|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~----l~~~~~~-----~~~~~~WspDg~-~l~y~~~d~~~ 244 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT----IADKVSG-----TNGEIVWGPDHT-SLFYVTKDETL 244 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC----CCCCEEE-----ECSCCEECSSTT-EEEEEEECTTC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe----CCccccC-----ceeeEEEecCCC-EEEEEEECCCC
Confidence 57889999 99999884432 236999998776 31 0011111 135789999765 55555555
Q ss_pred --CcEEEEECCCCc----EEEE------EEEEeecCCceEEEecC
Q 004998 679 --GVVQVGQVLHLI----YFSA------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 679 --~~v~lWDv~tg~----~~~~------v~~v~~~~~~~~~~~~~ 711 (720)
..|.+|++.+++ .+.+ ..++.|++++..+...+
T Consensus 245 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~ 289 (751)
T 2xe4_A 245 RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGS 289 (751)
T ss_dssp CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEE
T ss_pred CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEe
Confidence 258888998874 2321 45788999997766543
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=92.88 E-value=1.6 Score=43.31 Aligned_cols=95 Identities=9% Similarity=-0.129 Sum_probs=68.5
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+|+++++|.++++...++.|.+||.. ... ....+. ....+.++++.+++ .+.++...++.|..||
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~-------~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~ 131 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF-------TEYPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLT 131 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-------EEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEEC
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe-------EEecCCCCCCCCccceECCCC-CEEEEccCCCeEEEEC
Confidence 4678999999999998887778999999976 310 011111 23568999999854 5666666688999999
Q ss_pred CCCCcEEEE--------EEEEeecCCceEEEecC
Q 004998 686 VLHLIYFSA--------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 686 v~tg~~~~~--------v~~v~~~~~~~~~~~~~ 711 (720)
.. |+.... ..++++.+.+.+++.+.
T Consensus 132 ~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 164 (300)
T 2qc5_A 132 AD-GTIYEYDLPNKGSYPAFITLGSDNALWFTEN 164 (300)
T ss_dssp TT-SCEEEEECSSTTCCEEEEEECTTSSEEEEET
T ss_pred CC-CCEEEccCCCCCCCceeEEECCCCCEEEEec
Confidence 87 665432 67888888887776654
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=92.78 E-value=0.14 Score=59.88 Aligned_cols=55 Identities=16% Similarity=0.028 Sum_probs=43.2
Q ss_pred CEEEEEEecCCCCEEEEEeCC-C----cEEEEECCCCcEEEE----E--EEEeecCCceEEEecCccc
Q 004998 658 KLSSICWNSYIKSQIASSNFE-G----VVQVGQVLHLIYFSA----L--YCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 658 ~i~~v~~~~~~~~~laS~s~D-~----~v~lWDv~tg~~~~~----v--~~v~~~~~~~~~~~~~~~~ 714 (720)
.+..++|||++ .+||.++.+ | +|++||+.+|+.+.. + .+++|+|+ ..+.+++.|+
T Consensus 164 ~~~~~~~SPDG-~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~ 229 (741)
T 1yr2_A 164 ALDAWAASDDG-RLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAE 229 (741)
T ss_dssp EEEEEEECTTS-SEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCC
T ss_pred EEEeEEECCCC-CEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecC
Confidence 58899999975 467665543 3 599999999987654 2 57899999 9998888765
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=92.76 E-value=0.46 Score=48.60 Aligned_cols=92 Identities=8% Similarity=0.039 Sum_probs=59.3
Q ss_pred CCeEEEEECCCCCEEEE----eeC-------------CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCC
Q 004998 608 NLVCSLSFDRDGELFAA----AGV-------------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS 670 (720)
Q Consensus 608 ~~V~sv~f~~dg~~lat----~~~-------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 670 (720)
+.+++++++|||.+++| |.. .+.|..||..+.. .. .+. .-...+.++|+|+++
T Consensus 131 ~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~-----~~-~~~---~~~~p~gl~~spdg~- 200 (305)
T 3dr2_A 131 NSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP-----LQ-RMA---DLDHPNGLAFSPDEQ- 200 (305)
T ss_dssp SCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC-----CE-EEE---EESSEEEEEECTTSS-
T ss_pred CCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCc-----EE-EEe---cCCCCcceEEcCCCC-
Confidence 45788999999999887 432 2457777764431 00 111 223467899999754
Q ss_pred EEEEEeCC------CcEEEEECCCCcEEEE--EE---------EEeecCCceEEEec
Q 004998 671 QIASSNFE------GVVQVGQVLHLIYFSA--LY---------CIVLNKLLIIFRYG 710 (720)
Q Consensus 671 ~laS~s~D------~~v~lWDv~tg~~~~~--v~---------~v~~~~~~~~~~~~ 710 (720)
.|+.++.+ +.|.+||+..+. +.. ++ .+++.+.+++.+.+
T Consensus 201 ~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~ 256 (305)
T 3dr2_A 201 TLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSSS 256 (305)
T ss_dssp EEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEECC
T ss_pred EEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEec
Confidence 56666554 789999998765 332 22 56777777766654
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=92.58 E-value=0.51 Score=50.98 Aligned_cols=94 Identities=5% Similarity=-0.073 Sum_probs=62.6
Q ss_pred EEECCCCCEEEEeeCCC--cEEEeeCCcccccccccccceEEe-c-CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 004998 613 LSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEM-A-SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLH 688 (720)
Q Consensus 613 v~f~~dg~~lat~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~-~-~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~t 688 (720)
++|+|+|++|..++.++ +|.+||...... .. .+... . ......+++++|.++. |..++.++.|..||..+
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~-~~----~~g~~~~~~~~~p~~iav~p~~g~-lyv~d~~~~I~~~d~~~ 249 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA-PT----RIGQLGSTFSGKIGAVALDETEEW-LYFVDSNKNFGRFNVKT 249 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC-EE----EEEECCTTSCSCCCBCEECTTSSE-EEEECTTCEEEEEETTT
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCce-eE----EeeeccchhcCCcEEEEEeCCCCe-EEEEECCCcEEEEECCC
Confidence 99999999888877766 788888644310 00 00011 1 2345788999996554 44477889999999988
Q ss_pred CcEEEEE-------------E-EEeecC-CceEEEecCcc
Q 004998 689 LIYFSAL-------------Y-CIVLNK-LLIIFRYGMFQ 713 (720)
Q Consensus 689 g~~~~~v-------------~-~v~~~~-~~~~~~~~~~~ 713 (720)
+... .+ + .++|++ .+.++..++..
T Consensus 250 ~~~~-~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~ 288 (409)
T 3hrp_A 250 QEVT-LIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL 288 (409)
T ss_dssp CCEE-EEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT
T ss_pred CCEE-EEecccccCCCCCCccccEEEeCCCCEEEEEeCCC
Confidence 7632 22 2 788998 57777766543
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=92.53 E-value=0.18 Score=58.45 Aligned_cols=58 Identities=5% Similarity=-0.086 Sum_probs=40.4
Q ss_pred CcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Q 004998 629 KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 629 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~v 695 (720)
++|..||+.++ ..+....+...+....+... +.+|+.++.||.|++||+.||+.+.++
T Consensus 457 g~l~A~D~~tG--------~~~W~~~~~~~~~~g~~~~~-g~~v~~g~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 457 GRLLAWDPVAQ--------KAAWSVEHVSPWNGGTLTTA-GNVVFQGTADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp EEEEEEETTTT--------EEEEEEEESSSCCCCEEEET-TTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cEEEEEeCCCC--------cEEeecCCCCCCcCcceEeC-CCEEEEECCCCcEEEEECCCCceeeee
Confidence 78999998776 23333333333334445553 357888899999999999999998874
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=92.45 E-value=0.083 Score=56.33 Aligned_cols=67 Identities=3% Similarity=-0.086 Sum_probs=41.5
Q ss_pred CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004998 618 DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 618 dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~ 694 (720)
++.++++|+.|+.|..||..++ ..++.... +.+.+..+..+ +.++++++.||.|..||..+|+.+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG--------~~~W~~~~-~~~~s~p~~~~-g~~~v~~s~dg~l~a~d~~tG~~~w~ 74 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTG--------SIKWTLKE-DPVLQVPTHVE-EPAFLPDPNDGSLYTLGSKNNEGLTK 74 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTC--------CEEEEEEC-CCSCCCC------CCEEECTTTCCEEEC-----CCSEE
T ss_pred eCCEEEEEcCCCEEEEEECCCC--------CEEEEecC-CCceecceEcC-CCEEEEeCCCCEEEEEECCCCceeee
Confidence 6788999999999999998876 23333333 34444444443 34677888999999999999987543
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=92.26 E-value=2.5 Score=42.24 Aligned_cols=90 Identities=12% Similarity=0.074 Sum_probs=55.3
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCC--CcEEEeeCCcccccccccccceEEecCCCCE--EEEEEec
Q 004998 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVN--KKIKVFECDAIINENRDIHYPVVEMASRSKL--SSICWNS 666 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d--~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i--~~v~~~~ 666 (720)
..+++++..| .....+-.+.|++ +.++.+.|.+ .+|+++|+.++. .+....-.... -.++..
T Consensus 8 ~~~v~~~~ph----d~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgk--------v~~~~~l~~~~fgeGi~~~- 73 (243)
T 3mbr_X 8 GYRVVKRYPH----DTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGR--------ILQRAEVPPPYFGAGIVAW- 73 (243)
T ss_dssp CEEEEEEEEC----CTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCC--------EEEEEECCTTCCEEEEEEE-
T ss_pred ceEEEEEcCC----CCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCC--------EEEEEeCCCCcceeEEEEe-
Confidence 4578888876 2356788999997 7788888876 499999998762 11111111111 122332
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCcEEEEE
Q 004998 667 YIKSQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 667 ~~~~~laS~s~D~~v~lWDv~tg~~~~~v 695 (720)
+..+....-.++++-++|..|.+.+.++
T Consensus 74 -~~~ly~ltw~~~~v~v~D~~tl~~~~ti 101 (243)
T 3mbr_X 74 -RDRLIQLTWRNHEGFVYDLATLTPRARF 101 (243)
T ss_dssp -TTEEEEEESSSSEEEEEETTTTEEEEEE
T ss_pred -CCEEEEEEeeCCEEEEEECCcCcEEEEE
Confidence 2223333335777888888887777774
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=92.14 E-value=1.9 Score=43.66 Aligned_cols=90 Identities=10% Similarity=0.114 Sum_probs=57.5
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCEEEEEEecCCC
Q 004998 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSICWNSYIK 669 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~v~~~~~~~ 669 (720)
..+++++..| +.......|.|+ ++.++.+.|.+++|+++|++++. .+.. +...-.--.++... .
T Consensus 42 ~~~Vv~~~ph----d~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgk--------v~~~~l~~~~FgeGit~~g--~ 106 (268)
T 3nok_A 42 VAHIIREYPH----ATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQ--------PVWMERLGNIFAEGLASDG--E 106 (268)
T ss_dssp EEEEEEEEEC----CTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSS--------CSEEEECTTCCEEEEEECS--S
T ss_pred ceEEEEEEcC----CCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCc--------EEeEECCCCcceeEEEEeC--C
Confidence 3467777765 224667789998 57888999999999999998862 1111 22111112344432 3
Q ss_pred CEEEEEeCCCcEEEEECCCCcEEEEE
Q 004998 670 SQIASSNFEGVVQVGQVLHLIYFSAL 695 (720)
Q Consensus 670 ~~laS~s~D~~v~lWDv~tg~~~~~v 695 (720)
.+....-.++++.++|..|++.+.++
T Consensus 107 ~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 107 RLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp CEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred EEEEEEccCCEEEEEECCcCcEEEEE
Confidence 33444445788888888888888774
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=91.84 E-value=0.2 Score=53.60 Aligned_cols=85 Identities=11% Similarity=-0.015 Sum_probs=58.7
Q ss_pred cccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEecCC-
Q 004998 588 SFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMASR- 656 (720)
Q Consensus 588 ~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~- 656 (720)
.-.++++++++.-|. .. .++|+|||+++..+. .+++|.+||..+. .++.++.-.
T Consensus 52 D~~t~~v~~~i~vG~-----~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~--------~vv~~I~v~~ 116 (368)
T 1mda_H 52 CAGCGVTLGHSLGAF-----LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF--------LPIADIELPD 116 (368)
T ss_dssp ETTTTEEEEEEEECT-----TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC--------CEEEEEEETT
T ss_pred ECCCCeEEEEEeCCC-----CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC--------CEEEEEECCC
Confidence 446788899888531 23 699999999766664 4789999999886 233333110
Q ss_pred -------CCEEEEEEecCCCCEEEEEeC--CCcEEE--EECCC
Q 004998 657 -------SKLSSICWNSYIKSQIASSNF--EGVVQV--GQVLH 688 (720)
Q Consensus 657 -------~~i~~v~~~~~~~~~laS~s~--D~~v~l--WDv~t 688 (720)
..-..+.++|+++ +|+.+.+ +..|.| ||+.+
T Consensus 117 ~~~~~~g~~P~~ia~SpDGk-~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 117 APRFSVGPRVHIIGNCASSA-CLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp SCSCCBSCCTTSEEECTTSS-CEEEEECSSSCEEEEEETTTEE
T ss_pred ccccccCCCcceEEEcCCCC-EEEEEccCCCCeEEEEEEchhh
Confidence 1245789999766 5555554 467999 99987
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=91.79 E-value=0.38 Score=51.69 Aligned_cols=76 Identities=7% Similarity=0.040 Sum_probs=54.0
Q ss_pred EEEECCCCCEE-EEee---------CCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEE-eCCCc
Q 004998 612 SLSFDRDGELF-AAAG---------VNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASS-NFEGV 680 (720)
Q Consensus 612 sv~f~~dg~~l-at~~---------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~-s~D~~ 680 (720)
.++++|++..+ ++-. -..+|-+.|..+.. .+..+.-...+..|.++|+++.+|.++ ..+++
T Consensus 284 ~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k--------v~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~ 355 (386)
T 3sjl_D 284 QVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE--------RLAKFEMGHEIDSINVSQDEKPLLYALSTGDKT 355 (386)
T ss_dssp CEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC--------EEEEEEEEEEECEEEECSSSSCEEEEEETTTTE
T ss_pred eeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe--------EEEEEECCCCcceEEECCCCCeEEEEEcCCCCe
Confidence 57789998754 3322 12578888987762 233332234678999999887676665 45999
Q ss_pred EEEEECCCCcEEEEE
Q 004998 681 VQVGQVLHLIYFSAL 695 (720)
Q Consensus 681 v~lWDv~tg~~~~~v 695 (720)
|.|+|+.|++.+.++
T Consensus 356 VsViD~~t~k~~~~i 370 (386)
T 3sjl_D 356 LYIHDAESGEELRSV 370 (386)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCcEEEEe
Confidence 999999999999885
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=91.67 E-value=0.22 Score=57.94 Aligned_cols=58 Identities=7% Similarity=-0.085 Sum_probs=39.6
Q ss_pred CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004998 628 NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 628 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~ 694 (720)
+++|+.||+.++. .+........+..-.+... +.+|..++.||.|++||.+||+.+-+
T Consensus 454 ~g~l~A~D~~tG~--------~~W~~~~~~~~~~g~~~ta-gglvf~gt~dg~l~a~D~~tG~~lw~ 511 (689)
T 1yiq_A 454 SGKLIAWDPVKQQ--------AAWEVPYVTIFNGGTLSTA-GNLVFEGSADGRVIAYAADTGEKLWE 511 (689)
T ss_dssp EEEEEEEETTTTE--------EEEEEEESSSCCCCEEEET-TTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ceeEEEEECCCCC--------eEeEccCCCCccCccceEC-CCEEEEECCCCcEEEEECCCCcccee
Confidence 4778899988762 2333332222332344443 45889999999999999999999865
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=90.79 E-value=0.14 Score=55.69 Aligned_cols=30 Identities=7% Similarity=0.210 Sum_probs=26.6
Q ss_pred HHcCceeccCCCCcEEEccCCceEEeccCcc
Q 004998 138 HSQGIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
+...++|+|++|.|||++.++ +.++||+.+
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a 259 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFS 259 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC-EEECCCTTC
T ss_pred CCCeEEecCCCCCcEEEeCCC-CEEEeCccc
Confidence 357899999999999998776 999999887
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=90.77 E-value=6.6 Score=39.81 Aligned_cols=87 Identities=13% Similarity=0.101 Sum_probs=58.7
Q ss_pred ccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCC
Q 004998 589 FSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYI 668 (720)
Q Consensus 589 ~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~ 668 (720)
....++++++.. ......++|+++|.++++...+++|..||..... ...........++++.+++
T Consensus 19 ~~~~~~~~~~p~------~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~---------~~~~~~~~~p~gia~~~dG 83 (306)
T 2p4o_A 19 LAPAKIITSFPV------NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ---------QIHATVEGKVSGLAFTSNG 83 (306)
T ss_dssp CCCEEEEEEECT------TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCE---------EEEEECSSEEEEEEECTTS
T ss_pred CCCceEeEeCCC------CCCcceEEECCCCCEEEEeCCCCeEEEECCCCce---------EEEEeCCCCceeEEEcCCC
Confidence 355677777754 2568899999999998888788999999975431 1111223468899999975
Q ss_pred CCEEEEEe-CCC-cEEEEECCCCcE
Q 004998 669 KSQIASSN-FEG-VVQVGQVLHLIY 691 (720)
Q Consensus 669 ~~~laS~s-~D~-~v~lWDv~tg~~ 691 (720)
. ++++.. .++ .|-.+|..+|+.
T Consensus 84 ~-l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 84 D-LVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp C-EEEEEECTTSCEEEEEECTTSCE
T ss_pred c-EEEEeccCCcceEEEEcCCCCeE
Confidence 4 444332 333 355667788874
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=89.41 E-value=0.59 Score=52.84 Aligned_cols=79 Identities=13% Similarity=0.032 Sum_probs=54.4
Q ss_pred CeEEEEECCCCCE-EEEeeCCCcEEEeeCCccc---ccccccccce-EEecCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 609 LVCSLSFDRDGEL-FAAAGVNKKIKVFECDAII---NENRDIHYPV-VEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 609 ~V~sv~f~~dg~~-lat~~~d~~i~iwd~~~~~---~~~~~~~~~~-~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
...+|.|+|||++ ++++..+.+|-|+|+++.. ....+....+ .++.-...-.-++|+|++ ....+.--|++|.+
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~k 356 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVK 356 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEE
Confidence 3567999999996 7777789999999998641 1111111222 233334456789999976 44445556999999
Q ss_pred EECCC
Q 004998 684 GQVLH 688 (720)
Q Consensus 684 WDv~t 688 (720)
||+.+
T Consensus 357 wdi~~ 361 (595)
T 1fwx_A 357 WNIED 361 (595)
T ss_dssp EEHHH
T ss_pred EEhhH
Confidence 99987
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 720 | ||||
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 2e-12 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 2e-12 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 8e-12 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 2e-11 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 3e-11 | |
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 4e-11 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 5e-11 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 6e-11 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 0.004 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 9e-11 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 2e-10 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 3e-10 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 5e-10 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 8e-10 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 9e-10 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 1e-09 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 1e-09 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 2e-09 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 2e-09 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 2e-09 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 3e-09 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 0.002 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 4e-09 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 5e-09 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 5e-09 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 6e-09 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 9e-09 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 1e-08 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 1e-08 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 1e-08 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 2e-08 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 4e-08 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 5e-08 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 8e-08 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 9e-08 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 1e-07 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 2e-07 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 3e-07 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 4e-07 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 4e-07 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 5e-07 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 9e-07 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 2e-06 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 7e-04 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 4e-06 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 5e-06 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 6e-06 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 7e-06 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 7e-06 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 7e-06 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 1e-05 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 1e-05 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 2e-05 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 2e-05 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 3e-05 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 4e-05 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 6e-05 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 7e-05 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 1e-04 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 2e-04 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 2e-04 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 4e-04 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 0.001 | |
| d1erja_ | 388 | b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yea | 0.003 |
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 66.2 bits (161), Expect = 2e-12
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
Query: 271 LMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSLRHRVLPP 328
+ T +Y SPE++ + SDI+ LG LL+EL P T + +R
Sbjct: 174 FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 233
Query: 329 QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 364
+ ++ E +L+ + RP + E+L++ +
Sbjct: 234 -IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 269
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 65.8 bits (160), Expect = 2e-12
Identities = 16/95 (16%), Positives = 30/95 (31%), Gaps = 5/95 (5%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
T + +PE + D+Y G+ + E+ P+S + + + V P
Sbjct: 176 TPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASF 234
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 364
E + R + +LL F
Sbjct: 235 DKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 269
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 64.2 bits (156), Expect = 8e-12
Identities = 22/104 (21%), Positives = 36/104 (34%), Gaps = 6/104 (5%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
T ++ +PE + DI+ LG++ E+ P+ + Q
Sbjct: 179 TPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN 238
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL--NEPRDSM 371
K F L + R ELLQ +FL +P S+
Sbjct: 239 PEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSL 282
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 63.9 bits (155), Expect = 2e-11
Identities = 24/118 (20%), Positives = 48/118 (40%), Gaps = 7/118 (5%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRH--RVLPPQL 330
+A+PE G PV +D++ +GVL + L PF GE T+ +++ +
Sbjct: 190 EFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG-GENDDETLRNVKSCDWNMDDSA 248
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDEE 387
++ F LL +P+ R + + L+ +L + + +I +
Sbjct: 249 FSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDS 306
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.8 bits (152), Expect = 3e-11
Identities = 31/155 (20%), Positives = 61/155 (39%), Gaps = 17/155 (10%)
Query: 272 METNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--- 325
T +Y +PE L + D++ LGV+++ L C PF ++ R+
Sbjct: 174 CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY-SNHGLAISPGMKTRIRMG 232
Query: 326 ---LPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNE----PRDSMEEREAA 377
P + +E LL EP+ R + E + ++ + P+ +
Sbjct: 233 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVL 292
Query: 378 IELREQID--EEELLLEFLLLVQQRKQESAKKLQD 410
E +E+ + +EE+ + +Q KK++D
Sbjct: 293 KEDKERWEDVKEEMTSALATMRVDYEQIKIKKIED 327
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.0 bits (150), Expect = 4e-11
Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 5/99 (5%)
Query: 274 TNWYASPEELAGAPVSC-ASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ 329
T Y +PE L D++ G++L + P+ + + S + +
Sbjct: 168 TLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLN 227
Query: 330 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367
K + +L PS R + ++ + + N+P
Sbjct: 228 PWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 266
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 62.4 bits (151), Expect = 5e-11
Identities = 28/155 (18%), Positives = 53/155 (34%), Gaps = 5/155 (3%)
Query: 260 KKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTR 316
++ LL Y +PE VS A+D++ LG L++ L PF +
Sbjct: 152 RQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI 211
Query: 317 TMSSLRHRVLPPQLLLK-FPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 374
+ + + K EA F LL E R E LQ +L + + + +
Sbjct: 212 IENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQKIERVSTK 271
Query: 375 EAAIELREQIDEEELLLEFLLLVQQRKQESAKKLQ 409
+ + + ++V + ++
Sbjct: 272 VIRTLKHRRYYHTLIKKDLNMVVSAARISCGGAIR 306
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.1 bits (148), Expect = 6e-11
Identities = 24/97 (24%), Positives = 36/97 (37%), Gaps = 7/97 (7%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
T Y PE + G D++ LGVL +E PF + R P
Sbjct: 167 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF 226
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNE 366
+ + A LL PS RP + E+L+ ++
Sbjct: 227 V---TEGARDLISRLLKHNPSQRPMLREVLEHPWITA 260
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.3 bits (86), Expect = 0.004
Identities = 10/78 (12%), Positives = 28/78 (35%), Gaps = 3/78 (3%)
Query: 83 LSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142
L G + + + G + + L K + D ++ + HS+ +
Sbjct: 71 LYGYFHDATRVYLILEYAPLGT--VYRELQKLSK-FDEQRTATYITELANALSYCHSKRV 127
Query: 143 VVHNVRPSCFVMSSFNHV 160
+ +++P ++ S +
Sbjct: 128 IHRDIKPENLLLGSAGEL 145
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 61.2 bits (148), Expect = 9e-11
Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 9/124 (7%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR--VLPP 328
T Y +PE LA P S A D + +GV+ + L C PF E + +
Sbjct: 172 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY-DENDAKLFEQILKAEYEFDS 230
Query: 329 QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAI--ELREQID 385
A F L+ +P R + LQ ++ + ++ ++++
Sbjct: 231 PYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFA 290
Query: 386 EEEL 389
+ +
Sbjct: 291 KSKW 294
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.8 bits (144), Expect = 2e-10
Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV--LPP 328
T + +PE + P+ +D++ +GV+ + L PF G+ K T++++
Sbjct: 179 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL-GDTKQETLANVSAVNYEFED 237
Query: 329 QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIE 379
+ A F LL +P R + + LQ ++ +P+D+ + +A
Sbjct: 238 EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI-KPKDTQQALSSAWS 288
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 59.3 bits (143), Expect = 3e-10
Identities = 23/127 (18%), Positives = 42/127 (33%), Gaps = 7/127 (5%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
LV Q K+ D + ++++ +ASPE + + S SD++
Sbjct: 132 CLVGENQVIKVSDFGMTRFVLDDQYTSSTG----TKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 353
GVL++E+F + + + + L P RP
Sbjct: 188 FGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRP 247
Query: 354 KMGELLQ 360
LL+
Sbjct: 248 AFSRLLR 254
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 58.6 bits (141), Expect = 5e-10
Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
T Y SPE+ G V SD+Y LG +L+E+ PF+ + +R +PP
Sbjct: 177 TAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSA 236
Query: 331 LLK-FPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 364
+ + + L L P R + ++++ +
Sbjct: 237 RHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 272
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 58.1 bits (140), Expect = 8e-10
Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 10/101 (9%)
Query: 271 LMETNWYASPEELAGA---PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHR 324
L + + +PE + P S SD+Y G++L+EL P+S + + + +
Sbjct: 166 LSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRG 225
Query: 325 VLPPQLLL---KFPKEA-SFCLWLLHPEPSGRPKMGELLQS 361
L P L PK L + RP ++L S
Sbjct: 226 YLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.8 bits (139), Expect = 9e-10
Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 12/106 (11%)
Query: 274 TNWYASPEELAGAPV-SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQ 329
T Y+ PE + ++ ++ LG+LL+++ C PF EE R R RV +
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRV-SSE 230
Query: 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEERE 375
W L PS RP E+ ++ + E E
Sbjct: 231 C-------QHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAE 269
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 58.1 bits (140), Expect = 1e-09
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRV-LPPQ 329
T +A+PE + PV +D++ +GVL + L PF+ ++ + R
Sbjct: 191 TAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDED 250
Query: 330 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 374
EA F LL EP R + + L+ +L ++ R
Sbjct: 251 AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSNLTSR 296
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.5 bits (138), Expect = 1e-09
Identities = 20/140 (14%), Positives = 51/140 (36%), Gaps = 6/140 (4%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+LV K+ D ++ ++ + + + +PE ++ + ASD++
Sbjct: 141 ILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGG--KIPIRWTAPEAISYRKFTSASDVWS 198
Query: 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 353
G++++E+ M ++ P + + E + RP
Sbjct: 199 FGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRP 258
Query: 354 KMGELLQS-EFLNEPRDSME 372
K +++ + L DS++
Sbjct: 259 KFADIVSILDKLIRAPDSLK 278
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.9 bits (137), Expect = 2e-09
Identities = 15/92 (16%), Positives = 29/92 (31%), Gaps = 3/92 (3%)
Query: 272 METNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 328
+ +PE L S SD++ G+LL+E++ + +
Sbjct: 161 KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD 220
Query: 329 QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
P H + + RP +L +
Sbjct: 221 APDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE 252
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.0 bits (137), Expect = 2e-09
Identities = 24/140 (17%), Positives = 42/140 (30%), Gaps = 11/140 (7%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+LV KI D + + + + + +PE + + SD++
Sbjct: 140 ILVSDTLSCKIADFGLARLIEDNE----YTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGR 352
G+LL E+ G + +L R P+E P R
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDR 254
Query: 353 PKMGELLQSEFLNEPRDSME 372
P L L + + E
Sbjct: 255 PTFDYLRS--VLEDFFTATE 272
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 56.9 bits (137), Expect = 2e-09
Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 8/124 (6%)
Query: 274 TNWYASPEELAGA---PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327
T ++ +PE + D++ LG+ EL P + + P
Sbjct: 174 TPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLF-NMNAMSALYHIAQNESP 232
Query: 328 PQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDE 386
+ + +F L P RP LL+ F+ R + ++ + E
Sbjct: 233 ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRE 292
Query: 387 EELL 390
+ L
Sbjct: 293 LDNL 296
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.5 bits (136), Expect = 3e-09
Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 17/121 (14%)
Query: 276 WYASPEELAG-----APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327
++ +PE + P +D++ LG+ L E+ P + +
Sbjct: 175 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPT 234
Query: 328 PQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQIDE 386
++ F L R +LLQ F+ + +RE I E
Sbjct: 235 LAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSNK--------PIRELIAE 286
Query: 387 E 387
Sbjct: 287 A 287
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.4 bits (89), Expect = 0.002
Identities = 4/55 (7%), Positives = 23/55 (41%)
Query: 106 SLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHV 160
++ + + +R + + + +Q ++ + H I+ +++ + + +
Sbjct: 95 AVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDI 149
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.9 bits (134), Expect = 4e-09
Identities = 21/105 (20%), Positives = 33/105 (31%), Gaps = 7/105 (6%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
+ +PE + SD++ G+LL EL G + + P
Sbjct: 177 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP-C 235
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 374
+ P+ EP RP L FL + S E +
Sbjct: 236 PPECPESLHDLMCQCWRKEPEERPTFEYLQA--FLEDYFTSTEPQ 278
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.9 bits (134), Expect = 5e-09
Identities = 23/127 (18%), Positives = 40/127 (31%), Gaps = 4/127 (3%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+++ K+ D + + +K+ + + + E L + SD++
Sbjct: 161 CMLDEKFTVKVADFGL-ARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWS 219
Query: 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 353
GVLL+EL P L Q L HP+ RP
Sbjct: 220 FGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRP 279
Query: 354 KMGELLQ 360
EL+
Sbjct: 280 SFSELVS 286
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 56.3 bits (135), Expect = 5e-09
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 9/126 (7%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
T Y +PE L G + + D + GVLL+E+ PF G+++ S+R P
Sbjct: 166 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH-GQDEEELFHSIRMD--NPFY 222
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKM-GELLQSEFLNE-PRDSMEEREAAIELREQIDEE 387
KEA + L EP R + G++ Q E + +E +E R ++
Sbjct: 223 PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSP 282
Query: 388 ELLLEF 393
F
Sbjct: 283 FDCSNF 288
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 55.5 bits (133), Expect = 6e-09
Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 7/92 (7%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 329
+ +PE + S SD++ GVL++E F P+ K ++++ +
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYR--GMKGSEVTAMLEKGERMG 230
Query: 330 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360
P+E + RP +
Sbjct: 231 CPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 262
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 54.7 bits (131), Expect = 9e-09
Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 5/91 (5%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 329
++ PE L + S SDI+ GVL++E++ P+ + T + + +
Sbjct: 164 PVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYE-RFTNSETAEHIAQGLRLYR 222
Query: 330 LLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
L K + H + RP LL
Sbjct: 223 PHLASEKVYTIMYSCWHEKADERPTFKILLS 253
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 54.7 bits (131), Expect = 1e-08
Identities = 16/136 (11%), Positives = 36/136 (26%), Gaps = 7/136 (5%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+L++ K+ D + + +K + D++
Sbjct: 141 ILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 200
Query: 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHR--VLPPQLLLKFPKEA-SFCLWLLHPEPS 350
GV+++ L PF ++ + + + L +P
Sbjct: 201 TGVIMYTLLAGSPPF-WHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQ 259
Query: 351 GRPKMGELLQSEFLNE 366
R E L F +
Sbjct: 260 KRYTAEEALAHPFFQQ 275
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 54.8 bits (131), Expect = 1e-08
Identities = 26/151 (17%), Positives = 46/151 (30%), Gaps = 16/151 (10%)
Query: 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278
D+ + + G V +++ K D R + + + L T YA
Sbjct: 128 DVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH-------QHIPYRENKNLTGTARYA 180
Query: 279 SPEELAGAPVSCASDIYRLGVLLFELFC--------PFSTGEEKTRTMSSLRHRVLPPQL 330
S G S D+ LG +L +T +K +S + L
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVL 240
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360
+P E ++ + +P L Q
Sbjct: 241 CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 271
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 54.8 bits (131), Expect = 1e-08
Identities = 21/142 (14%), Positives = 56/142 (39%), Gaps = 8/142 (5%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+LV K+ D ++ ++ P + + +PE + + ASD++
Sbjct: 159 ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWS 218
Query: 297 LGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGR 352
G++++E+ P+ ++++ P + L + + R
Sbjct: 219 YGIVMWEVMSYGERPYW-DMTNQDVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHR 277
Query: 353 PKMGELLQS--EFLNEPRDSME 372
PK G+++ + + + P +S++
Sbjct: 278 PKFGQIVNTLDKMIRNP-NSLK 298
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.6 bits (128), Expect = 2e-08
Identities = 22/98 (22%), Positives = 38/98 (38%), Gaps = 8/98 (8%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 329
+ +PE L S ASD + GV L+E+F P+ G ++ + +
Sbjct: 177 PFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLP 235
Query: 330 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNE 366
P++ + + +P RP L +FL E
Sbjct: 236 RPEDCPQDIYNVMVQCWAHKPEDRPTFVALR--DFLLE 271
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.2 bits (127), Expect = 4e-08
Identities = 17/92 (18%), Positives = 28/92 (30%), Gaps = 6/92 (6%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 329
+ +PE L + SD++ G+LL+E+F P+ G L
Sbjct: 229 PVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP-GIPVDANFYKLIQNGFKMD 287
Query: 330 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360
+E + RP L
Sbjct: 288 QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTS 319
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 52.9 bits (126), Expect = 5e-08
Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 11/140 (7%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYR 296
+LV KI D ++ + Q +K+ + + + E L + + SD++
Sbjct: 158 ILVGENYVAKIADFGLS------RGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWS 211
Query: 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP 353
GVLL+E+ G L + L + +P RP
Sbjct: 212 YGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERP 271
Query: 354 KMGELLQ--SEFLNEPRDSM 371
++L + L E + +
Sbjct: 272 SFAQILVSLNRMLEERKTYV 291
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 52.1 bits (124), Expect = 8e-08
Identities = 18/112 (16%), Positives = 33/112 (29%), Gaps = 9/112 (8%)
Query: 258 EEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC--------PFS 309
K+ ++ L T Y S G S D+ LG + +
Sbjct: 160 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA 219
Query: 310 TGEEKTRTMSSLRHRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELLQ 360
T ++K + + +L FP+E + + + P L
Sbjct: 220 TNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.9 bits (124), Expect = 9e-08
Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 7/93 (7%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 332
Y SPE L +SD++ LG ++++L PF G E ++ P+
Sbjct: 175 QYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE--- 231
Query: 333 KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 364
KF +A LL + + R E+ L
Sbjct: 232 KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 264
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 51.4 bits (122), Expect = 1e-07
Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 3/92 (3%)
Query: 272 METNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP 328
+ +PE L + SD++ GVLL+E+F G L+
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMD 257
Query: 329 QLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
+ + H PS RP +L++
Sbjct: 258 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 51.4 bits (122), Expect = 2e-07
Identities = 14/90 (15%), Positives = 30/90 (33%), Gaps = 3/90 (3%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
+ PE + + SD++ GV+L+E+F G + +R +
Sbjct: 205 PIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACP 264
Query: 331 LLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360
+ + P+ RP + +
Sbjct: 265 ENCPLELYNLMRLCWSKLPADRPSFCSIHR 294
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.2 bits (119), Expect = 3e-07
Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 7/101 (6%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
+ +PE + + ASD++ GV ++E+ G + + + + P +
Sbjct: 172 PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLP-M 230
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ--SEFLNEPR 368
P S +PS RP+ EL S L E +
Sbjct: 231 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 271
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.1 bits (119), Expect = 4e-07
Identities = 25/138 (18%), Positives = 38/138 (27%), Gaps = 45/138 (32%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKT--------------- 315
T Y SPE L G S SDI+ +G+ L E+ P + K
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
Query: 316 --------------------------RTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPE 348
+ + + P F E F L
Sbjct: 226 TPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 285
Query: 349 PSGRPKMGELLQSEFLNE 366
P+ R + +L+ F+
Sbjct: 286 PAERADLKQLMVHAFIKR 303
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.2 bits (119), Expect = 4e-07
Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 15/131 (11%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
+ + E + + SD++ GV ++EL G + S L PQ
Sbjct: 176 PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 235
Query: 331 LLKFPKEASFCLWLLHPEPSGRPKMGELLQ--SEFLNEP----------RDSMEEREAAI 378
+ + + RPK EL+ S+ +P R + +
Sbjct: 236 PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSN 295
Query: 379 ELREQIDEEEL 389
R +DEE++
Sbjct: 296 FYRALMDEEDM 306
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 49.7 bits (118), Expect = 5e-07
Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 3/88 (3%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 332
+ +PE LA S SD++ GVLL+E+ G + ++ L +
Sbjct: 181 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 240
Query: 333 KFPKEASFCLWLLHPEPSGRPKMGELLQ 360
K PS RP E+ Q
Sbjct: 241 CPEKVYELMRACWQWNPSDRPSFAEIHQ 268
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 49.1 bits (116), Expect = 9e-07
Identities = 19/121 (15%), Positives = 35/121 (28%), Gaps = 28/121 (23%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEE----------------- 313
T WY +PE L + + D++ +G + E+F F +
Sbjct: 178 TLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 237
Query: 314 ---KTRTMSSLRHRVLPPQLLLKFPKEAS-----FCLWLLHPEPSGRPKMGELLQSEFLN 365
+ + Q + KF + L L P+ R L +
Sbjct: 238 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 297
Query: 366 E 366
+
Sbjct: 298 D 298
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.8 bits (113), Expect = 2e-06
Identities = 16/107 (14%), Positives = 36/107 (33%), Gaps = 9/107 (8%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQ 329
+ +PE + S SD++ GV ++E P+ + K + + + +
Sbjct: 175 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK--KMKGPEVMAFIEQGKRME 232
Query: 330 LLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEERE 375
+ P E + + RP + Q + S+ +
Sbjct: 233 CPPECPPELYALMSDCWIYKWEDRPDFLTVEQR--MRACYYSLASKV 277
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 39.7 bits (92), Expect = 7e-04
Identities = 8/88 (9%), Positives = 27/88 (30%)
Query: 106 SLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIES 165
L ++L + + V + Q+ + + V ++ ++ + ++ +
Sbjct: 94 PLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDF 153
Query: 166 ASCSDSGSDSHEEGLNTQNMETKDLSSP 193
G+D + +P
Sbjct: 154 GLSKALGADDSYYTARSAGKWPLKWYAP 181
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.9 bits (110), Expect = 4e-06
Identities = 23/130 (17%), Positives = 39/130 (30%), Gaps = 32/130 (24%)
Query: 272 METNWYASPEELAGAPV-SCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327
+ T WY P+ L GA + S + D++ G + EL P G + + + +
Sbjct: 162 VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGT 221
Query: 328 P---------------------------QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELL 359
P ++ K LL P R E L
Sbjct: 222 PTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEAL 281
Query: 360 QSEFLNEPRD 369
Q + ++
Sbjct: 282 QHPYFSDFCP 291
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.8 bits (110), Expect = 5e-06
Identities = 23/126 (18%), Positives = 38/126 (30%), Gaps = 30/126 (23%)
Query: 274 TNWYASPEELAGA-PVSCASDIYRLGVLLFELFC--PFSTGEEKTRTMSSL--------- 321
T WY +PE L GA D++ +G +L EL PF G+ ++ +
Sbjct: 163 TRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTE 222
Query: 322 -------------RHRVLPPQLLLKFPKEAS-----FCLWLLHPEPSGRPKMGELLQSEF 363
+ P L A L P R + L+ ++
Sbjct: 223 EQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY 282
Query: 364 LNEPRD 369
+
Sbjct: 283 FSNRPG 288
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 46.6 bits (110), Expect = 6e-06
Identities = 17/96 (17%), Positives = 37/96 (38%), Gaps = 7/96 (7%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 332
Y +PE ++ P + + D + G+L++E+ PF +T + + +
Sbjct: 166 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY-DSNTMKTYEKILNA--ELRFPP 222
Query: 333 KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367
F ++ L+ + S R + + N P
Sbjct: 223 FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHP 258
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.3 bits (109), Expect = 7e-06
Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 7/98 (7%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
T Y +PE L A D + LGV+++E+ C PF + + L + P+
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR- 226
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367
EA S LL +P R G E +
Sbjct: 227 --TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHR 262
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.3 bits (109), Expect = 7e-06
Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 4/91 (4%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
+ +PE + + SD++ G+ L+ELF G +
Sbjct: 210 PVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS 269
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360
P E +P RP +++Q
Sbjct: 270 PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 46.0 bits (108), Expect = 7e-06
Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 3/91 (3%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL 330
+ SPE L + SD++ GV+L+E+ G + + + L +
Sbjct: 198 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP 257
Query: 331 LLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361
P RP E++ S
Sbjct: 258 DNCPDMLFELMRMCWQYNPKMRPSFLEIISS 288
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.6 bits (107), Expect = 1e-05
Identities = 22/150 (14%), Positives = 47/150 (31%), Gaps = 34/150 (22%)
Query: 276 WYASPEELAG-APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPP--- 328
WY +PE + + DI+ +G ++ E+ F + + ++ PP
Sbjct: 183 WYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEF 242
Query: 329 -------------------------QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSE 362
+L A + +L + R GE L
Sbjct: 243 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHP 302
Query: 363 FLNEPRDSMEEREAAIELREQIDEEELLLE 392
+ D+ +E + + + D+ + L+
Sbjct: 303 YFESLHDTEDEPQVQ-KYDDSFDDVDRTLD 331
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 45.5 bits (107), Expect = 1e-05
Identities = 20/96 (20%), Positives = 32/96 (33%), Gaps = 4/96 (4%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 332
+ A G ++D + LG +LF+L PF + K + + +L
Sbjct: 171 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPD 230
Query: 333 KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367
F E S LL + + R E P
Sbjct: 231 SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP 266
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 45.3 bits (106), Expect = 2e-05
Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 4/91 (4%)
Query: 274 TNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLRHRV---LPPQL 330
+ +PE + + SD++ GVLL+E+F ++ + R+ +
Sbjct: 199 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 258
Query: 331 LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQ 360
E L H EPS RP EL++
Sbjct: 259 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVE 289
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.9 bits (105), Expect = 2e-05
Identities = 28/125 (22%), Positives = 40/125 (32%), Gaps = 31/125 (24%)
Query: 276 WYASPEELAGAP-VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLL 331
WY +PE L G S A DI+ LG + E+ F E + R P +++
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 332 LK-----------FPKEA----------------SFCLWLLHPEPSGRPKMGELLQSEFL 364
FPK A S +LH +P+ R L F
Sbjct: 227 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 365 NEPRD 369
+
Sbjct: 287 QDVTK 291
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.4 bits (104), Expect = 3e-05
Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 9/100 (9%)
Query: 276 WYASPEELAGAP--VSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVL--PP 328
Y +P+ + G A D + LGVL++EL PF T + + + + + R+L P
Sbjct: 195 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF-TVDGEKNSQAEISRRILKSEP 253
Query: 329 QLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367
+ A LL +P R G E
Sbjct: 254 PYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 293
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 44.1 bits (103), Expect = 4e-05
Identities = 32/207 (15%), Positives = 64/207 (30%), Gaps = 38/207 (18%)
Query: 237 VLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-GAPVSCASDIY 295
+L+ + KI D + + + + + WY +PE + + + DI+
Sbjct: 140 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR--WYRAPEIMLNSKGYTKSIDIW 197
Query: 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF------------------ 334
+G +L E+ F + L P Q L
Sbjct: 198 SVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK 257
Query: 335 -----------PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELREQ 383
K +L P R ++ + L +L + D +E A +
Sbjct: 258 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPIAEAPFKFD 317
Query: 384 IDEEELLLEFLLLVQQRKQESAKKLQD 410
++ ++L E L ++ E + Q
Sbjct: 318 MELDDLPKEKL---KELIFEETARFQP 341
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.3 bits (101), Expect = 6e-05
Identities = 28/162 (17%), Positives = 46/162 (28%), Gaps = 46/162 (28%)
Query: 272 METNWYASPEELAGA-PVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLP 327
+ T WY +PE + + DI+ +G ++ EL F + + LR P
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 328 PQLLLKF-----------------------------PKEASFCLWLLHPEPSGRPKMGEL 358
LLK P +L + R +
Sbjct: 239 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 298
Query: 359 LQSEFLNEPRD------------SMEEREAAI-ELREQIDEE 387
L + + D S E R+ I E + +E
Sbjct: 299 LAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDE 340
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 43.2 bits (101), Expect = 7e-05
Identities = 25/128 (19%), Positives = 38/128 (29%), Gaps = 30/128 (23%)
Query: 272 METNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFST-----------------G 311
+ A + + D++ G +L EL F
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 243
Query: 312 EEKTRTMSSLRHRVLPPQL---------LLKFPKEA-SFCLWLLHPEPSGRPKMGELLQS 361
E+ R M+ PQ+ + P EA + C LL P+ R E
Sbjct: 244 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
Query: 362 EFLNEPRD 369
F +E RD
Sbjct: 304 SFFDELRD 311
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.1 bits (98), Expect = 1e-04
Identities = 34/249 (13%), Positives = 69/249 (27%), Gaps = 49/249 (19%)
Query: 153 VMSSFNH---VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRED 209
H + FI + + + L + E L D L R T
Sbjct: 50 QTVMLRHENILGFIAA--DNKDNGTWTQLWLVSDYHEHGSL-----FDYLNRYTVTVEGM 102
Query: 210 LQLVTAPTNDLSEASCMQSSSAYGTHVV---------LVEGMQEHKILDNRVNVEQVEEK 260
++L + + L+ + + LV+ I D + V + +
Sbjct: 103 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV-RHDSA 161
Query: 261 KQPFPMKQILLMETNWYASPEELAGA------PVSCASDIYRLGVLLFELF--------- 305
+ + T Y +PE L + +DIY +G++ +E+
Sbjct: 162 TDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIH 221
Query: 306 ----CPFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFC----------LWLLHPEPSG 351
P+ ++ +R V +L P C + +
Sbjct: 222 EDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAA 281
Query: 352 RPKMGELLQ 360
R + +
Sbjct: 282 RLTALRIKK 290
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 41.4 bits (96), Expect = 2e-04
Identities = 19/122 (15%), Positives = 36/122 (29%), Gaps = 31/122 (25%)
Query: 276 WYASPEELAGA-PVSCASDIYRLGVLLFELFC---PFSTGEE------------------ 313
WY +P+ L G+ S DI+ +G + E+ F E
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKN 224
Query: 314 --------KTRTMSSLRHRVLPPQLLLKFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFL 364
K ++ + L + +L +P+ R + L+ +
Sbjct: 225 WPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF 284
Query: 365 NE 366
E
Sbjct: 285 KE 286
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.5 bits (96), Expect = 2e-04
Identities = 43/311 (13%), Positives = 93/311 (29%), Gaps = 49/311 (15%)
Query: 83 LSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142
L V + ++ F ++ + +D ++ Q++ + HS GI
Sbjct: 81 LLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGI 140
Query: 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRR 202
+ +++PS V+ S + + + + T + T+ +P
Sbjct: 141 IHRDLKPSNIVVKSDCTLKIL----DFGLARTAGTSFMMTPYVVTRYYRAP--------- 187
Query: 203 TRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQ 262
L + D+ C+ L G + V +
Sbjct: 188 ----EVILGMGYKENVDIWSVGCIMGEMVRHKI--LFPGRDYIDQWNK---VIEQLGTPC 238
Query: 263 PFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFCPFSTGEEKTRTMSSLR 322
P MK++ N+ + + AG + S
Sbjct: 239 PEFMKKLQPTVRNYVENRPKYAGLTFP-------------------KLFPDSLFPADSEH 279
Query: 323 HRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEEREAAIELRE 382
+++ Q +L +P+ R + + LQ ++N D E ++ +
Sbjct: 280 NKLKASQAR-------DLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPPQIYD 332
Query: 383 -QIDEEELLLE 392
Q+DE E +E
Sbjct: 333 KQLDEREHTIE 343
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 40.9 bits (95), Expect = 4e-04
Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 7/96 (7%)
Query: 276 WYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL 332
+PE + + A D + LGVL++E+ PF + + +V P
Sbjct: 203 EALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS--- 259
Query: 333 KFPKEA-SFCLWLLHPEPSGRPKMGELLQSEFLNEP 367
F + LL + + R + ++ N
Sbjct: 260 HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHK 295
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 39.2 bits (90), Expect = 0.001
Identities = 31/161 (19%), Positives = 46/161 (28%), Gaps = 51/161 (31%)
Query: 264 FPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSS 320
+ ++T Y SPE L GAP C +DI+ L+FEL F +E
Sbjct: 182 YDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE-PDEGHSYTKD 240
Query: 321 LRHRVLPPQLLLKFPKE------------------------------------------- 337
H +LL + P
Sbjct: 241 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDE 300
Query: 338 ----ASFCLWLLHPEPSGRPKMGELLQSEFLNEPRDSMEER 374
+ F +L +P R G L+ +L + E R
Sbjct: 301 AKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIR 341
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 388 | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.2 bits (87), Expect = 0.003
Identities = 28/145 (19%), Positives = 58/145 (40%), Gaps = 16/145 (11%)
Query: 534 PLVRHSQLSSDGRTSKPLVNERSSINNLGSKEGYSEGRRSGWINPFLEGLCKYLSFSKLR 593
LV ++Q ++ + P + + S + + + + + NP L
Sbjct: 2 YLVPYNQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILY-NP------------ALP 48
Query: 594 VKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVF--ECDAIINENRDIHYPVV 651
+ D+ L+ +++VC + F DGE A G NK +V+ +++ D
Sbjct: 49 REIDVELHKSLDHTSVVCCVKFSNDGEYL-ATGCNKTTQVYRVSDGSLVARLSDDSAANK 107
Query: 652 EMASRSKLSSICWNSYIKSQIASSN 676
+ + + SS + YI+S S +
Sbjct: 108 DPENLNTSSSPSSDLYIRSVCFSPD 132
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 720 | |||
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 99.98 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 99.97 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 99.96 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.62 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.51 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.49 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.44 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.43 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.43 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.42 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.4 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.39 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.38 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.38 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.38 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.37 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.37 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.34 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.29 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.28 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.26 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.25 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.21 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.19 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.17 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.12 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.09 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.09 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.06 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.03 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 98.91 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 98.87 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 98.84 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 98.76 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 98.74 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 98.7 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 98.63 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 98.6 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 98.56 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 98.4 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 98.34 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 98.34 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 98.31 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 98.25 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 98.24 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 98.1 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 97.97 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 97.96 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 97.88 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 97.75 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 97.52 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 97.22 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 97.22 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 97.21 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 96.96 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 95.84 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 95.65 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 94.87 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 93.72 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 92.95 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 92.74 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 92.55 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 92.39 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 91.19 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 90.92 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 89.2 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 89.02 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 88.67 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 87.85 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 87.78 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 87.18 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 86.44 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 85.95 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 83.14 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 81.84 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 81.4 |
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-43 Score=368.71 Aligned_cols=209 Identities=14% Similarity=0.145 Sum_probs=172.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++.+.........+|+|||| .|++|.+++.+.. .+++.+++.|+.||+.||+|||++|
T Consensus 54 ~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~gl~yLH~~~ 132 (270)
T d1t4ha_ 54 RFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK-VMKIKVLRSWCRQILKGLQFLHTRT 132 (270)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhccc-cccHHHHHHHHHHHHHHHHHHHHCC
Confidence 4457888999999999999999443333334468999999 8999999995543 4999999999999999999999998
Q ss_pred --ceeccCCCCcEEEc-cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 --IVVHNVRPSCFVMS-SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 --IvHrDLKP~NILl~-~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
||||||||+|||++ .++.+||+|||+++.....
T Consensus 133 ~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~-------------------------------------------- 168 (270)
T d1t4ha_ 133 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-------------------------------------------- 168 (270)
T ss_dssp SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT--------------------------------------------
T ss_pred CCEEeCCcChhhceeeCCCCCEEEeecCcceeccCC--------------------------------------------
Confidence 99999999999997 5789999888887321000
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||+.|||||++.+. |+.++||||||
T Consensus 169 ------------------------------------------------~~~~~~GT~~Y~aPE~~~~~-~~~~~DIwSlG 199 (270)
T d1t4ha_ 169 ------------------------------------------------FAKAVIGTPEFMAPEMYEEK-YDESVDVYAFG 199 (270)
T ss_dssp ------------------------------------------------SBEESCSSCCCCCGGGGGTC-CCTHHHHHHHH
T ss_pred ------------------------------------------------ccCCcccCccccCHHHhCCC-CCCcCchhhHH
Confidence 00114799999999999764 99999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLN 365 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~ 365 (720)
|++|||++ ||.........+..+..+..|+.+....+ ...+||.+||++||++|||++|+|+||||+
T Consensus 200 vilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk 270 (270)
T d1t4ha_ 200 MCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270 (270)
T ss_dssp HHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred HHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence 99999999 88776666677777777777776665554 455999999999999999999999999995
|
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3e-44 Score=372.98 Aligned_cols=212 Identities=13% Similarity=0.150 Sum_probs=168.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ ++.++. .+|+|||| .|++|.++|.+. ..+++.+++.|+.||+.||+|||++|
T Consensus 49 ~~~~Ei~~l~~l~HpnIv~~~~-~~~~~~---~~~ivmEy~~gg~L~~~l~~~-~~l~e~~~~~i~~qi~~al~ylH~~~ 123 (271)
T d1nvra_ 49 NIKKEICINKMLNHENVVKFYG-HRREGN---IQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLHGIG 123 (271)
T ss_dssp CHHHHHHHHHTCCCTTBCCEEE-EEEETT---EEEEEEECCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEee-eeccCc---eeEEEEeccCCCcHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 3457888999999999999999 555543 67999999 889999999544 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+||+|||+|+........
T Consensus 124 IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~-------------------------------------------- 159 (271)
T d1nvra_ 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE-------------------------------------------- 159 (271)
T ss_dssp EECSCCCGGGEEECTTCCEEECCCTTCEECEETTEE--------------------------------------------
T ss_pred CccCcccHHHEEECCCCCEEEccchhheeeccCCcc--------------------------------------------
Confidence 999999999999999999999999888432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIwSLGvl 300 (720)
......+||+.|||||++.+..+ +.++|||||||+
T Consensus 160 --------------------------------------------~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvi 195 (271)
T d1nvra_ 160 --------------------------------------------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV 195 (271)
T ss_dssp --------------------------------------------CCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHH
Confidence 00012579999999999988875 688999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCcccccc-CchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLK-FPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~-~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||||++ ||............+............ .+...+||.+||++||++|||++|+|+||||++.
T Consensus 196 lyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~ 266 (271)
T d1nvra_ 196 LTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 266 (271)
T ss_dssp HHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred HHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCcC
Confidence 999999 776554443444444443333332333 4455599999999999999999999999999875
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.7e-44 Score=369.34 Aligned_cols=203 Identities=17% Similarity=0.233 Sum_probs=166.1
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|++++|||||++++ ++.++. .+|+|||| .||+|.++|.+.+ .+++.+++.|+.||+.||+|||++||
T Consensus 53 ~~~E~~il~~l~hpnIv~~~~-~~~~~~---~~~ivmEy~~~g~L~~~l~~~~-~l~e~~~~~i~~qi~~al~~lH~~~i 127 (263)
T d2j4za1 53 LRREVEIQSHLRHPNILRLYG-YFHDAT---RVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYCHSKRV 127 (263)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCCCCeEEE-EEEECC---EEEEEEeecCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 347888999999999999999 665553 68999999 8999999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+|||++.++.+||+|||++......
T Consensus 128 vHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~------------------------------------------------ 159 (263)
T d2j4za1 128 IHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------------------------------------ 159 (263)
T ss_dssp CCCCCCGGGEEECTTSCEEECCCCSCSCCCCC------------------------------------------------
T ss_pred eeeeeccccceecCCCCEeecccceeeecCCC------------------------------------------------
Confidence 99999999999999999999988887432110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..|+.++|||||||+||
T Consensus 160 --------------------------------------------~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvily 195 (263)
T d2j4za1 160 --------------------------------------------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 195 (263)
T ss_dssp --------------------------------------------CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHH
Confidence 001147899999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNE 366 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~ 366 (720)
||++ ||...... ..+..+....+ .++...+ ...+||.+||++||.+|||++|+|+||||+.
T Consensus 196 ell~G~~Pf~~~~~~-~~~~~i~~~~~--~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~ 260 (263)
T d2j4za1 196 EFLVGKPPFEANTYQ-ETYKRISRVEF--TFPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 260 (263)
T ss_dssp HHHHSSCTTCCSSHH-HHHHHHHTTCC--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred HHhcCCCCCCCCCHH-HHHHHHHcCCC--CCCccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCC
Confidence 9999 77665444 34444443322 1223334 4459999999999999999999999999974
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.3e-43 Score=366.05 Aligned_cols=207 Identities=15% Similarity=0.189 Sum_probs=170.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|+.+|++++|||||++++ ++.++. .+|+|||| .|++|.+++.+. .+++.+++.|++||+.||.|||++|||
T Consensus 65 ~~E~~il~~l~HpnIv~~~~-~~~~~~---~~~ivmEy~~gg~L~~~~~~~--~l~~~~~~~i~~qi~~aL~yLH~~~ii 138 (293)
T d1yhwa1 65 INEILVMRENKNPNIVNYLD-SYLVGD---ELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVI 138 (293)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCEeeEeE-EEEECC---EEEEEEEecCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 47888999999999999999 555554 58999999 899999988553 399999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.+|++||+|||+++.......
T Consensus 139 HrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~----------------------------------------------- 171 (293)
T d1yhwa1 139 HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS----------------------------------------------- 171 (293)
T ss_dssp CCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-----------------------------------------------
T ss_pred ccCCcHHHeEECCCCcEeeccchhheeeccccc-----------------------------------------------
Confidence 999999999999999999999988843211100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
.....+||+.|+|||++.+..|+.++|||||||++||
T Consensus 172 -------------------------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilye 208 (293)
T d1yhwa1 172 -------------------------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE 208 (293)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccccCCCccChhhhcCCCCCchhceehHhHHHHH
Confidence 0011479999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++ ||............+.....+...+..++. ..+||.+||++||.+|||+.|+|+||||+..
T Consensus 209 mltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~~ 276 (293)
T d1yhwa1 209 MIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276 (293)
T ss_dssp HHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGGC
T ss_pred HhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence 999 777666555555555554444444444444 4599999999999999999999999999754
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=1.5e-42 Score=367.04 Aligned_cols=206 Identities=15% Similarity=0.132 Sum_probs=165.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|+.+|++++|||||++++ ++.++. .+|+|||| .|++|..++... .++++.+++.|++||+.||.|||++|
T Consensus 61 ~~~~Ei~il~~l~HpnIv~~~~-~~~~~~---~~~iv~E~~~~g~l~~~~~~~-~~l~e~~~~~i~~qi~~aL~yLH~~~ 135 (309)
T d1u5ra_ 61 DIIKEVRFLQKLRHPNTIQYRG-CYLREH---TAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHN 135 (309)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCCEeeEEE-EEEECC---EEEEEEEecCCCchHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447889999999999999999 555543 68999999 778887666443 45999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+||+|||++.....
T Consensus 136 iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~------------------------------------------------ 167 (309)
T d1u5ra_ 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP------------------------------------------------ 167 (309)
T ss_dssp CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS------------------------------------------------
T ss_pred EeccCCCcceEEECCCCCEEEeecccccccCC------------------------------------------------
Confidence 99999999999999999999988887732100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC---CCCCccccchhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG---APVSCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~~~s~~sDIwSLG 298 (720)
.....||+.|||||++.+ ..|+.++||||||
T Consensus 168 ----------------------------------------------~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlG 201 (309)
T d1u5ra_ 168 ----------------------------------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG 201 (309)
T ss_dssp ----------------------------------------------BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHH
T ss_pred ----------------------------------------------CCccccCccccCHHHHhccCCCCcCchhhhhhHH
Confidence 011478999999999965 3489999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|++|||++ ||........ +..+.....|+.....++. ..+||.+||++||.+|||+.|+|+||||....
T Consensus 202 vilyel~~g~~Pf~~~~~~~~-~~~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~~ 274 (309)
T d1u5ra_ 202 ITCIELAERKPPLFNMNAMSA-LYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (309)
T ss_dssp HHHHHHHHSSCTTTTSCHHHH-HHHHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred HHHHHHHHCCCCCCCCCHHHH-HHHHHhCCCCCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCCC
Confidence 99999999 7766555433 3344444444443444454 45999999999999999999999999998653
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-42 Score=363.21 Aligned_cols=212 Identities=13% Similarity=0.161 Sum_probs=167.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|+.+|++++|||||++++ ++.++. .+|+|||| .|++|.+++.+....+++.+++.|+.||+.||.|||++|
T Consensus 55 ~~~~E~~il~~l~HpnIv~l~~-~~~~~~---~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ 130 (288)
T d2jfla1 55 DYMVEIDILASCDHPNIVKLLD-AFYYEN---NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 130 (288)
T ss_dssp GTHHHHHHHHHCCCTTBCCEEE-EEEETT---EEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCeEEE-EEeeCC---eEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 555543 57999999 899999998655566999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+||+|||++...... .
T Consensus 131 ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~-----------------------------------~----------- 164 (288)
T d2jfla1 131 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-----------------------------------I----------- 164 (288)
T ss_dssp EECCCCSGGGEEECTTSCEEECCCTTCEECHHH-----------------------------------H-----------
T ss_pred EEEeecChhheeECCCCCEEEEechhhhccCCC-----------------------------------c-----------
Confidence 999999999999999999999999887321000 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCcccc-----CCCCCccccchh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELA-----GAPVSCASDIYR 296 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-----~~~~s~~sDIwS 296 (720)
. ......||+.|+|||++. +..|+.++||||
T Consensus 165 -------------------------------------~-------~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwS 200 (288)
T d2jfla1 165 -------------------------------------Q-------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWS 200 (288)
T ss_dssp -------------------------------------H-------HHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHH
T ss_pred -------------------------------------c-------cccccccccccCCHHHHhhcccCCCCCChhhhHHH
Confidence 0 001147899999999984 445899999999
Q ss_pred hhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 297 LGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 297 LGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|||++|||++ ||......................+..++ ...+||.+||++||.+|||+.|+|+||||+...
T Consensus 201 lGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~~ 276 (288)
T d2jfla1 201 LGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDS 276 (288)
T ss_dssp HHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCCC
T ss_pred HHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence 9999999999 77665554333333333222222233444 445999999999999999999999999998653
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.7e-42 Score=362.92 Aligned_cols=208 Identities=16% Similarity=0.208 Sum_probs=159.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ +++++. .+|+|||| .|++|.++|...+ .+++.+++.|+.||+.||.|||++|
T Consensus 53 ~~~~Ei~il~~l~HpnIv~l~~-~~~~~~---~~~lvmE~~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~al~ylH~~~ 127 (307)
T d1a06a_ 53 SMENEIAVLHKIKHPNIVALDD-IYESGG---HLYLIMQLVSGGELFDRIVEKG-FYTERDASRLIFQVLDAVKYLHDLG 127 (307)
T ss_dssp --CHHHHHHHTCCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHTCS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEeccCCCcHHHhhhccc-CCCHHHHHHHHHHHHHHHHhhhhce
Confidence 4457888999999999999999 665553 68999999 8899999996544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEc---cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
||||||||+|||+. .++.+||+|||+++......
T Consensus 128 iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~------------------------------------------- 164 (307)
T d1a06a_ 128 IVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS------------------------------------------- 164 (307)
T ss_dssp CCCSCCCGGGEEESSSSTTCCEEECCC-----------------------------------------------------
T ss_pred eeeEEecccceeecccCCCceEEEeccceeEEccCCC-------------------------------------------
Confidence 99999999999995 47889999888874321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||+.|||||++.+..|+.++||||||
T Consensus 165 ------------------------------------------------~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlG 196 (307)
T d1a06a_ 165 ------------------------------------------------VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIG 196 (307)
T ss_dssp --------------------------------------------------------CTTSCHHHHTTCCCCTHHHHHHHH
T ss_pred ------------------------------------------------eeeeeeeCccccCcHHHcCCCCCcHHHhhhhh
Confidence 00114799999999999999999999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+||||++ ||...... ..+..+.... ++......+ +...+||.+||++||++|||+.|+|+||||++.
T Consensus 197 vilyell~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~ 270 (307)
T d1a06a_ 197 VIAYILLCGYPPFYDENDA-KLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 270 (307)
T ss_dssp HHHHHHHHSSCSCCCSSHH-HHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTSS
T ss_pred HHHHHHHhCCCCCCCCCHH-HHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence 99999999 77665544 3444444332 222333344 445599999999999999999999999999864
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.9e-43 Score=361.28 Aligned_cols=209 Identities=17% Similarity=0.225 Sum_probs=159.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---CCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---PKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..+|++++|||||++++ ++.+... ..+|+|||| .||+|.+++.+ ....+++..++.++.||+.||.|||
T Consensus 49 ~~~~E~~il~~l~HpnIv~~~~-~~~~~~~-~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH 126 (269)
T d2java1 49 MLVSEVNLLRELKHPNIVRYYD-RIIDRTN-TTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH 126 (269)
T ss_dssp HHHHHHHHTTSCCCTTBCCEEE-EEEC-----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCEeeEEE-EEEeCCC-CEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3447888999999999999999 4433222 258999999 89999999842 3456999999999999999999999
Q ss_pred HcC-----ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccc
Q 004998 139 SQG-----IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLV 213 (720)
Q Consensus 139 s~g-----IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla 213 (720)
++| ||||||||+||||+.++.+||+|||+++...... .
T Consensus 127 ~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~---------------------------------~---- 169 (269)
T d2java1 127 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT---------------------------------S---- 169 (269)
T ss_dssp HHCC---------CCGGGEEECTTSCEEECCHHHHHHC------------------------------------------
T ss_pred HhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCC---------------------------------C----
Confidence 977 9999999999999999999998888874321110 0
Q ss_pred cCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCcccc
Q 004998 214 TAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASD 293 (720)
Q Consensus 214 ~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sD 293 (720)
.....+||+.|+|||++.+..|+.++|
T Consensus 170 -----------------------------------------------------~~~~~~gt~~Y~APE~l~~~~~~~~~D 196 (269)
T d2java1 170 -----------------------------------------------------FAKAFVGTPYYMSPEQMNRMSYNEKSD 196 (269)
T ss_dssp -----------------------------------------------------------CCCSCCCHHHHTTCCCCHHHH
T ss_pred -----------------------------------------------------ccccCCCCcccCCHHHHcCCCCChHHH
Confidence 001147899999999999999999999
Q ss_pred chhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCccc
Q 004998 294 IYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFL 364 (720)
Q Consensus 294 IwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~ 364 (720)
||||||++|||++ ||...... .....+..+.+++......+...+||.+||++||.+|||+.|+|+|||+
T Consensus 197 IwSlGvilyel~tg~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i 269 (269)
T d2java1 197 IWSLGCLLYELCALMPPFTAFSQK-ELAGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 269 (269)
T ss_dssp HHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred HHhhCHHHHHHhhCCCCCCCCCHH-HHHHHHHcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence 9999999999999 77665443 4555566555543322333445699999999999999999999999996
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-42 Score=367.51 Aligned_cols=208 Identities=17% Similarity=0.175 Sum_probs=162.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-c
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS-Q 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~ 140 (720)
+..+|+.+|++++|||||++++ ++.++. .+|+|||| .|++|.+++.+.+ .+++.+++.++.||+.||.|||+ +
T Consensus 50 ~~~~Ei~il~~l~HpnIv~l~~-~~~~~~---~~~iVmEy~~gg~L~~~l~~~~-~l~~~~~~~~~~qil~aL~yLH~~~ 124 (322)
T d1s9ja_ 50 QIIRELQVLHECNSPYIVGFYG-AFYSDG---EISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKH 124 (322)
T ss_dssp HHHHHGGGGGGCCCTTBCCEEE-EEECSS---EEEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEEcCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 4458889999999999999999 665554 58999999 8999999996544 49999999999999999999997 5
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
||+||||||+||||+.+|++||+|||+|.....
T Consensus 125 ~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~----------------------------------------------- 157 (322)
T d1s9ja_ 125 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----------------------------------------------- 157 (322)
T ss_dssp CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH-----------------------------------------------
T ss_pred CEEccccCHHHeeECCCCCEEEeeCCCccccCC-----------------------------------------------
Confidence 999999999999999999999998888732100
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
. .....+||++|+|||++.+..|+.++|||||||+
T Consensus 158 --------------------------------------~-------~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvi 192 (322)
T d1s9ja_ 158 --------------------------------------S-------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 192 (322)
T ss_dssp --------------------------------------H-------TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHH
T ss_pred --------------------------------------C-------ccccccCCccccCchHHcCCCCCcHHHHHHHHHH
Confidence 0 0012589999999999999999999999999999
Q ss_pred hhhccc---cCCCCchHHHHH-----------------------------------------HHhhcCCCCcccccc-Cc
Q 004998 301 LFELFC---PFSTGEEKTRTM-----------------------------------------SSLRHRVLPPQLLLK-FP 335 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~-----------------------------------------~~l~~~~~p~~~~~~-~p 335 (720)
+|||++ ||.+.+...... ..+.....|...... .+
T Consensus 193 l~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 272 (322)
T d1s9ja_ 193 LVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSL 272 (322)
T ss_dssp HHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHHTSCCCCCCBTTBCH
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCccccCCH
Confidence 999999 776543221110 011111111111112 23
Q ss_pred hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 336 ~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
...+||.+||++||.+|||++|+|+||||+..
T Consensus 273 ~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~ 304 (322)
T d1s9ja_ 273 EFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 304 (322)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHH
T ss_pred HHHHHHHHHcCCChhHCcCHHHHhhCHhhCcC
Confidence 45599999999999999999999999999753
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.7e-42 Score=360.35 Aligned_cols=209 Identities=18% Similarity=0.259 Sum_probs=167.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ +++++. .+|+|||| .||+|.+++...+ .+++.+++.++.||+.||+|||++|
T Consensus 54 ~~~~E~~il~~l~HpnIv~l~~-~~~~~~---~~~ivmEy~~gg~L~~~~~~~~-~l~e~~~~~~~~qi~~al~ylH~~~ 128 (288)
T d1uu3a_ 54 YVTRERDVMSRLDHPFFVKLYF-TFQDDE---KLYFGLSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLHGKG 128 (288)
T ss_dssp HHHHHHHHHHHCCSTTBCCEEE-EEECSS---EEEEEECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCCeeEEEE-EEEECC---EEEEEEEccCCCCHHHhhhccC-CCCHHHHHHHHHHHHHHHHhhcccc
Confidence 3447888999999999999999 665553 57999999 8999999985544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+||+|||+|+........
T Consensus 129 iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~-------------------------------------------- 164 (288)
T d1uu3a_ 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ-------------------------------------------- 164 (288)
T ss_dssp EECSCCSGGGEEECTTSCEEECCCTTCEECC-------------------------------------------------
T ss_pred EEcCcCCccccccCCCceEEecccccceecccCCcc--------------------------------------------
Confidence 999999999999999999999999888543211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......+||+.|+|||++.+..|+.++|||||||+|
T Consensus 165 --------------------------------------------~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvil 200 (288)
T d1uu3a_ 165 --------------------------------------------ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCII 200 (288)
T ss_dssp -------------------------------------------------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------cccccccCCccccCceeeccCCCCcccceehhhHHH
Confidence 000124799999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCChHH------HHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPKMGE------LLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpta~e------iL~hp~~~~~ 367 (720)
|||++ ||...+.. ..+..+.+..+ .++. ..+...+||.+||++||.+|||++| +++||||+..
T Consensus 201 yell~g~~Pf~~~~~~-~~~~~i~~~~~--~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i 273 (288)
T d1uu3a_ 201 YQLVAGLPPFRAGNEY-LIFQKIIKLEY--DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESV 273 (288)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHTTCC--CCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTC
T ss_pred HHHhhCCCCCCCcCHH-HHHHHHHcCCC--CCCccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCC
Confidence 99999 77765554 34444444332 1222 3355569999999999999999998 5789999886
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=1.5e-41 Score=365.65 Aligned_cols=211 Identities=18% Similarity=0.277 Sum_probs=171.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|+.+|++++|||||++++ +++++. .+|+|||| .|++|.+++.+.+.++++.+++.|+.||+.||.|||++|
T Consensus 72 ~~~~Ei~il~~l~HpnIv~~~~-~~~~~~---~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~ 147 (352)
T d1koba_ 72 TVKNEISIMNQLHHPKLINLHD-AFEDKY---EMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS 147 (352)
T ss_dssp HHHHHHHHHTTCCSTTBCCEEE-EEECSS---EEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3447888999999999999999 665543 67999999 899999988666667999999999999999999999999
Q ss_pred ceeccCCCCcEEEc--cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 142 IVVHNVRPSCFVMS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 142 IvHrDLKP~NILl~--~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
||||||||+||||+ .++.+||+|||++.......
T Consensus 148 iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~-------------------------------------------- 183 (352)
T d1koba_ 148 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE-------------------------------------------- 183 (352)
T ss_dssp EECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS--------------------------------------------
T ss_pred eeecccccccccccccCCCeEEEeecccceecCCCC--------------------------------------------
Confidence 99999999999998 57899999888874332110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
......||+.|+|||++.+..|+.++|||||||
T Consensus 184 -----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 216 (352)
T d1koba_ 184 -----------------------------------------------IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGV 216 (352)
T ss_dssp -----------------------------------------------CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHH
T ss_pred -----------------------------------------------ceeeccCcccccCHHHHcCCCCCCccchHHHHH
Confidence 001146899999999999999999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
++|||++ ||.+..... .+..+.... +++.....+ +...+||.+||++||.+|||+.|+|+||||+....
T Consensus 217 ilyelltG~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~~~ 291 (352)
T d1koba_ 217 LGYVLLSGLSPFAGEDDLE-TLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS 291 (352)
T ss_dssp HHHHHHHSCCSSCCSSHHH-HHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred HHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCCcc
Confidence 9999999 777665543 344444332 333333444 44559999999999999999999999999987644
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.7e-41 Score=352.40 Aligned_cols=207 Identities=18% Similarity=0.269 Sum_probs=166.9
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|+.+|++++|||||++++ ++++.. .+|+|||| .|++|.++|.+.+ .+++.+++.++.||+.||.|||++||
T Consensus 60 ~~~E~~il~~l~HpnIv~~~~-~~~~~~---~~~iv~E~~~gg~L~~~i~~~~-~l~~~~~~~~~~qi~~al~yLH~~~i 134 (293)
T d1jksa_ 60 IEREVSILKEIQHPNVITLHE-VYENKT---DVILILELVAGGELFDFLAEKE-SLTEEEATEFLKQILNGVYYLHSLQI 134 (293)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EEECSS---EEEEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEEcCCCccccchhcccc-ccchhHHHHHHHHHHHHHHhhhhcce
Confidence 347888999999999999999 665554 68999999 8999999995543 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCC----ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 143 VVHNVRPSCFVMSSFN----HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 143 vHrDLKP~NILl~~~~----~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|||||||+|||++.++ .+|++|||++.......
T Consensus 135 vHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~------------------------------------------- 171 (293)
T d1jksa_ 135 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN------------------------------------------- 171 (293)
T ss_dssp ECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSC-------------------------------------------
T ss_pred eecccccceEEEecCCCcccceEecchhhhhhcCCCc-------------------------------------------
Confidence 9999999999998766 48998888773321100
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
......||+.|+|||++.+..++.++||||||
T Consensus 172 ------------------------------------------------~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlG 203 (293)
T d1jksa_ 172 ------------------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIG 203 (293)
T ss_dssp ------------------------------------------------BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHH
T ss_pred ------------------------------------------------cccccCCCCcccCHHHHcCCCCCCcccchhhh
Confidence 00114689999999999998899999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCC--CCccccccCch-HHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|++|||++ ||.+.... ..+..+.... +++......+. ..+||.+||++||.+|||++|+|+||||+..
T Consensus 204 vilyell~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~ 277 (293)
T d1jksa_ 204 VITYILLSGASPFLGDTKQ-ETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 277 (293)
T ss_dssp HHHHHHHHSSCSSCCSSHH-HHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC-
T ss_pred HHHHHHHcCCCCCCCCCHH-HHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 99999999 77765554 3444444432 33344444444 4599999999999999999999999999864
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=4.4e-41 Score=356.87 Aligned_cols=203 Identities=14% Similarity=0.194 Sum_probs=166.3
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|++++|||||++++ ++.+.. .+|+|||| .|++|.+++.... .+++..++.++.||+.||.|||++||
T Consensus 51 ~~~E~~il~~l~HpnIv~~~~-~~~~~~---~~~ivmE~~~gg~l~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~i 125 (316)
T d1fota_ 51 TNDERLMLSIVTHPFIIRMWG-TFQDAQ---QIFMIMDYIEGGELFSLLRKSQ-RFPNPVAKFYAAEVCLALEYLHSKDI 125 (316)
T ss_dssp HHHHHHHHHSCCBTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHTS-SCCHHHHHHHHHHHHHHHHHHHTTTE
T ss_pred HHHHHHHHHhccCcChhheee-eEeeCC---eeeeEeeecCCccccccccccc-cccccHHHHHHHHHHHhhhhhccCcE
Confidence 347888999999999999999 555543 68999999 8999999885544 48999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+||||+.+|.+||+|||+++.....
T Consensus 126 iHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~------------------------------------------------ 157 (316)
T d1fota_ 126 IYRDLKPENILLDKNGHIKITDFGFAKYVPDV------------------------------------------------ 157 (316)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCSSCEECSSC------------------------------------------------
T ss_pred EccccCchheeEcCCCCEEEecCccceEeccc------------------------------------------------
Confidence 99999999999999999999988887432100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
....+||+.|+|||++.+..|+.++|||||||++|
T Consensus 158 ---------------------------------------------~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvily 192 (316)
T d1fota_ 158 ---------------------------------------------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIY 192 (316)
T ss_dssp ---------------------------------------------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccCcccccCHHHHcCCCCCchhhccccchhHH
Confidence 01147999999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
||++ ||...+... .+..+.....+ ++... +...+|+.+||.+||.+|+ |++++|+||||++.
T Consensus 193 emltG~~Pf~~~~~~~-~~~~i~~~~~~--~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i 263 (316)
T d1fota_ 193 EMLAGYTPFYDSNTMK-TYEKILNAELR--FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV 263 (316)
T ss_dssp HHHHSSCTTCCSSHHH-HHHHHHHCCCC--CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred HHHhCCCCCCCcCHHH-HHHHHHcCCCC--CCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccC
Confidence 9999 787765553 34444433221 22223 4456999999999999996 99999999999986
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=1.1e-40 Score=358.60 Aligned_cols=208 Identities=17% Similarity=0.262 Sum_probs=169.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|+.+|++++|||||++++ +++++. .+|+|||| .||+|.++|.+....+++.+++.|+.||+.||.|||++|||
T Consensus 71 ~~E~~il~~l~HpnIv~~~~-~~~~~~---~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~ii 146 (350)
T d1koaa2 71 RKEIQTMSVLRHPTLVNLHD-AFEDDN---EMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYV 146 (350)
T ss_dssp HHHHHHHHHTCCTTBCCEEE-EEEETT---EEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCcEEE-EEEECC---EEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCe
Confidence 37888999999999999999 565543 68999999 89999999965555699999999999999999999999999
Q ss_pred eccCCCCcEEEc--cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 144 VHNVRPSCFVMS--SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 144 HrDLKP~NILl~--~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||+|||++ .++.+||+|||+++..+...
T Consensus 147 HrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~---------------------------------------------- 180 (350)
T d1koaa2 147 HLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---------------------------------------------- 180 (350)
T ss_dssp CCCCCGGGEEESSTTSCCEEECCCTTCEECCTTS----------------------------------------------
T ss_pred eeeechhHeeeccCCCCeEEEeecchheeccccc----------------------------------------------
Confidence 999999999996 46789999888874332110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|||||++.+..|+.++|||||||++
T Consensus 181 ---------------------------------------------~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvil 215 (350)
T d1koaa2 181 ---------------------------------------------SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLS 215 (350)
T ss_dssp ---------------------------------------------CEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHH
T ss_pred ---------------------------------------------ccceecCcccccCHHHHcCCCCChhHhhhhhhHHH
Confidence 00124789999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCC--CCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
|||++ ||.+.... ..+..+.... +++......+ ...+||.+||++||++|||++|+|+||||+...
T Consensus 216 yell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~~ 287 (350)
T d1koaa2 216 YILLSGLSPFGGENDD-ETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN 287 (350)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCTT
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence 99999 77665544 3444444332 3333434444 455999999999999999999999999998763
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.9e-41 Score=357.66 Aligned_cols=207 Identities=18% Similarity=0.259 Sum_probs=168.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ ++++.. .+|+|||| .||+|.+++.+.+ .+++..++.+++||+.||+|||++|
T Consensus 51 ~~~~E~~il~~l~hp~Iv~l~~-~~~~~~---~~~iv~ey~~gg~L~~~~~~~~-~~~e~~~~~~~~qil~al~ylH~~~ 125 (337)
T d1o6la_ 51 HTVTESRVLQNTRHPFLTALKY-AFQTHD---RLCFVMEYANGGELFFHLSRER-VFTEERARFYGAEIVSALEYLHSRD 125 (337)
T ss_dssp HHHHHHHHHHSCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEEEEEe-eecccc---ccccceeccCCCchhhhhhccc-CCcHHHHHHHHHHHhhhhhhhhhcC
Confidence 3447888999999999999999 666554 68999999 9999999996544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.+|++||+|||+++.......
T Consensus 126 iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~--------------------------------------------- 160 (337)
T d1o6la_ 126 VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--------------------------------------------- 160 (337)
T ss_dssp CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC---------------------------------------------
T ss_pred ccccccCHHHeEecCCCCEEEeecccccccccCCc---------------------------------------------
Confidence 99999999999999999999999988853211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....+||+.|+|||++.+..|+.++|||||||++
T Consensus 161 ---------------------------------------------~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvil 195 (337)
T d1o6la_ 161 ---------------------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVM 195 (337)
T ss_dssp ---------------------------------------------CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHH
T ss_pred ---------------------------------------------ccccceeCHHHhhhhhccCCCCChhhcccchhhHH
Confidence 00125799999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccc-cCchHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLL-KFPKEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~-~~p~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
|||++ ||...+.. .....+....+ .++. ..+...+||.+||++||.+||+ +.|+++||||...
T Consensus 196 yeml~G~~pf~~~~~~-~~~~~i~~~~~--~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i 267 (337)
T d1o6la_ 196 YEMMCGRLPFYNQDHE-RLFELILMEEI--RFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHCCC--CCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred HHHHHCCCCCCCcCHH-HHHHHHhcCCC--CCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccC
Confidence 99999 67665554 34444443322 1222 3345569999999999999994 8999999999875
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=5.6e-41 Score=362.85 Aligned_cols=206 Identities=17% Similarity=0.177 Sum_probs=163.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
++..+..+++.++|||||++++ ++++.. .+|+|||| .|++|.++|.+.. .+++.+++.|+.||+.||.|||++|
T Consensus 53 ~e~~~~~~l~~~~hpnIv~l~~-~~~~~~---~~~ivmE~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~ylH~~~ 127 (364)
T d1omwa3 53 NERIMLSLVSTGDCPFIVCMSY-AFHTPD---KLSFILDLMNGGDLHYHLSQHG-VFSEADMRFYAAEIILGLEHMHNRF 127 (364)
T ss_dssp HHHHHHHHHSSSCCTTBCCEEE-EEECSS---EEEEEECCCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCCcEEEEEE-EEEECC---EEEEEEEecCCCcHHHHHHhcc-cccHHHHHHHHHHHHHHHHHHHHCC
Confidence 3445677888999999999999 565553 57999999 8999999995543 4899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.+|.+||+|||+++......
T Consensus 128 iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~---------------------------------------------- 161 (364)
T d1omwa3 128 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---------------------------------------------- 161 (364)
T ss_dssp EECCCCSGGGEEECSSSCEEECCCTTCEECSSSC----------------------------------------------
T ss_pred ccceeeccceeEEcCCCcEEEeeeceeeecCCCc----------------------------------------------
Confidence 9999999999999999999999998874321110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC-CCCCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG-APVSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~s~~sDIwSLGvl 300 (720)
....+||+.|+|||++.+ ..|+.++|||||||+
T Consensus 162 ----------------------------------------------~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvi 195 (364)
T d1omwa3 162 ----------------------------------------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM 195 (364)
T ss_dssp ----------------------------------------------CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------ccccccccccchhHHhhcCCCCCcccchhHHHHH
Confidence 011478999999999975 458999999999999
Q ss_pred hhhccc---cCCCCchH--HHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCC-----hHHHHcCcccCCC
Q 004998 301 LFELFC---PFSTGEEK--TRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPK-----MGELLQSEFLNEP 367 (720)
Q Consensus 301 l~eLlt---pf~~~~~~--~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpt-----a~eiL~hp~~~~~ 367 (720)
||||++ ||...... ....... ...++.++..++ ...+||.+||++||.+||| |+|+++||||+..
T Consensus 196 lyemltG~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i 271 (364)
T d1omwa3 196 LFKLLRGHSPFRQHKTKDKHEIDRMT--LTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL 271 (364)
T ss_dssp HHHHHHSSCSSCSSCSSCHHHHHHHS--SSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhc--ccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCC
Confidence 999999 77654322 1222221 122333333444 4559999999999999999 7999999999986
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.2e-40 Score=358.40 Aligned_cols=205 Identities=12% Similarity=0.088 Sum_probs=167.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ ++.+.. .+|+|||| .|++|.+++.+.+ .+++.+++.|+.||+.||.|||++|
T Consensus 87 ~~~~E~~il~~l~hpnIv~~~~-~~~~~~---~~~~v~e~~~~g~l~~~l~~~~-~l~e~~~~~i~~qi~~aL~yLH~~~ 161 (350)
T d1rdqe_ 87 HTLNEKRILQAVNFPFLVKLEF-SFKDNS---NLYMVMEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLHSLD 161 (350)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCCcEeeccc-cccccc---ccccccccccccchhhhHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 555543 57999999 9999999995544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+||||+.+|++||+|||+++.....
T Consensus 162 iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~----------------------------------------------- 194 (350)
T d1rdqe_ 162 LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------------------------------- 194 (350)
T ss_dssp EECCCCSGGGEEECTTSCEEECCCTTCEECSSC-----------------------------------------------
T ss_pred EecCcCCHHHcccCCCCCEEeeeceeeeecccc-----------------------------------------------
Confidence 999999999999999999999988887432100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.....||+.|||||++.+..|+.++|||||||+|
T Consensus 195 ----------------------------------------------~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvil 228 (350)
T d1rdqe_ 195 ----------------------------------------------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLI 228 (350)
T ss_dssp ----------------------------------------------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHH
T ss_pred ----------------------------------------------cccccCccccCCHHHHcCCCCCccccccchhHHH
Confidence 0114789999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|||++ ||...... ..+..+....++. .....+...+||.+||++||.+|+ |+++|++||||+..
T Consensus 229 yemltG~~Pf~~~~~~-~~~~~i~~~~~~~-p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~ 300 (350)
T d1rdqe_ 229 YEMAAGYPPFFADQPI-QIYEKIVSGKVRF-PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHCCCCC-CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred HHHHhCCCCCCCcCHH-HHHHHHhcCCCCC-CccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCC
Confidence 99999 77765544 4444444433221 112334556999999999999994 99999999999876
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.6e-40 Score=344.27 Aligned_cols=206 Identities=18% Similarity=0.236 Sum_probs=163.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ ++..+ .+++|||| .||+|.++|......+++..++.|+.||+.||+|||++|
T Consensus 50 ~~~~E~~~l~~l~HpnIv~~~~-~~~~~----~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ 124 (276)
T d1uwha_ 50 AFKNEVGVLRKTRHVNILLFMG-YSTAP----QLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS 124 (276)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSS----SCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeeeE-EEecc----EEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 3447888999999999999999 44332 46999999 889999999766667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+||+|||+++........
T Consensus 125 ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~-------------------------------------------- 160 (276)
T d1uwha_ 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGS-------------------------------------------- 160 (276)
T ss_dssp CCCSCCCGGGEEEETTSSEEECCCCCSCC---------------------------------------------------
T ss_pred EeccccCHHHEEEcCCCCEEEccccceeeccccCCc--------------------------------------------
Confidence 999999999999999999999998887432111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC---CCCccccchhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA---PVSCASDIYRLG 298 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~s~~sDIwSLG 298 (720)
.......||+.|||||++.+. .|+.++||||||
T Consensus 161 --------------------------------------------~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~G 196 (276)
T d1uwha_ 161 --------------------------------------------HQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 196 (276)
T ss_dssp -------------------------------------------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHH
T ss_pred --------------------------------------------ccccccccCcccCCHHHHhcccCCCCCchhhhhhhH
Confidence 000114789999999999653 489999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCCccc---cccCchH-HHHHHHcCCCCCCCCCChHHHHcC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQL---LLKFPKE-ASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~---~~~~p~~-~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|+||||+| ||............+..+..+|.+ ...+|+. .+|+.+||+.||.+|||+.||+++
T Consensus 197 v~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~ 266 (276)
T d1uwha_ 197 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266 (276)
T ss_dssp HHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 99999999 787766665666666665555432 3344544 499999999999999999999874
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.3e-40 Score=344.41 Aligned_cols=212 Identities=13% Similarity=0.164 Sum_probs=161.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|..+|++++|||||++++ ++.++. .+|+||||..+.+...+......+++.+++.+++||+.||+|||++||
T Consensus 46 ~~~~Ei~il~~l~hpnIv~~~~-~~~~~~---~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~i 121 (299)
T d1ua2a_ 46 TALREIKLLQELSHPNIIGLLD-AFGHKS---NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWI 121 (299)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECCTT---CCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCCCEeEEEe-eeccCC---ceeehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccce
Confidence 3447889999999999999999 565554 579999994444444554555669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+|||++.++.+||+|||.++.......
T Consensus 122 iHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~---------------------------------------------- 155 (299)
T d1ua2a_ 122 LHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR---------------------------------------------- 155 (299)
T ss_dssp CCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC----------------------------------------------
T ss_pred ecccCCcceEEecCCCccccccCccccccCCCcc----------------------------------------------
Confidence 9999999999999999999999998844322100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGvll 301 (720)
.....+||++|+|||++.+. .|+.++|||||||++
T Consensus 156 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil 191 (299)
T d1ua2a_ 156 --------------------------------------------AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCIL 191 (299)
T ss_dssp --------------------------------------------CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------cccceecChhhccHHHHccCCCCChhhhhhhcchHH
Confidence 00114789999999998765 489999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcC--CC--------------------Ccc-----ccccCchHHHHHHHcCCCCCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHR--VL--------------------PPQ-----LLLKFPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~--~~--------------------p~~-----~~~~~p~~~~li~~~L~~dP~~ 351 (720)
|||++ ||........ +..+.+. .. +.. +....+...+||.+||++||++
T Consensus 192 ~el~~g~~pf~~~~~~~~-l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~ 270 (299)
T d1ua2a_ 192 AELLLRVPFLPGDSDLDQ-LTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCA 270 (299)
T ss_dssp HHHHHSSCSSCCSSHHHH-HHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTT
T ss_pred HHHHhCcCCCCCCCHHHH-HHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhh
Confidence 99999 5665544432 2222110 00 000 0112234569999999999999
Q ss_pred CCChHHHHcCcccCCCcc
Q 004998 352 RPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 352 Rpta~eiL~hp~~~~~~~ 369 (720)
||||.|+|+||||+....
T Consensus 271 R~sa~e~L~Hp~f~~~p~ 288 (299)
T d1ua2a_ 271 RITATQALKMKYFSNRPG 288 (299)
T ss_dssp SCCHHHHHTSGGGTSSSC
T ss_pred CcCHHHHhCCHhhCCCCC
Confidence 999999999999987543
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=6.8e-40 Score=341.17 Aligned_cols=208 Identities=15% Similarity=0.175 Sum_probs=166.8
Q ss_pred eeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|..+|++++ |||||++++ +++++. .+|+|||| .|++|.++|...+ .+++.+++.|+.||+.||.|||++|
T Consensus 56 ~~~E~~~l~~l~~hpnIv~~~~-~~~~~~---~~~ivmE~~~~g~L~~~l~~~~-~l~e~~~~~~~~qi~~al~~lH~~~ 130 (277)
T d1phka_ 56 TLKEVDILRKVSGHPNIIQLKD-TYETNT---FFFLVFDLMKKGELFDYLTEKV-TLSEKETRKIMRALLEVICALHKLN 130 (277)
T ss_dssp HHHHHHHHHHHTTCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCCeEEEEe-ecccCc---ceEEEEEcCCCchHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 347888999997 999999999 665554 68999999 8999999996544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+||+|||+++..+...
T Consensus 131 ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~---------------------------------------------- 164 (277)
T d1phka_ 131 IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE---------------------------------------------- 164 (277)
T ss_dssp EECSCCSGGGEEECTTCCEEECCCTTCEECCTTC----------------------------------------------
T ss_pred CcccccccceEEEcCCCCeEEccchheeEccCCC----------------------------------------------
Confidence 9999999999999999999999999884332110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC------CCCCccccch
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG------APVSCASDIY 295 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~------~~~s~~sDIw 295 (720)
.....+||+.|+|||.+.+ ..++.++|||
T Consensus 165 ---------------------------------------------~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~Diw 199 (277)
T d1phka_ 165 ---------------------------------------------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMW 199 (277)
T ss_dssp ---------------------------------------------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHH
T ss_pred ---------------------------------------------ceeeeeccCCCCCHHHhhccccccCCCCCchheEc
Confidence 0011478999999999853 3378999999
Q ss_pred hhhhhhhhccc---cCCCCchHHHHHHHhhcCC-CCcccc-ccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRV-LPPQLL-LKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~-~p~~~~-~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+||+||||++ ||............+.... ++.... ...+...+|+.+||++||.+|||++|+|+||||++.
T Consensus 200 slGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~~ 276 (277)
T d1phka_ 200 STGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY 276 (277)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred ccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence 99999999999 7877665543333333322 233233 334455699999999999999999999999999864
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-40 Score=352.22 Aligned_cols=204 Identities=18% Similarity=0.250 Sum_probs=164.2
Q ss_pred ehhhhcc-cCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 66 SDGVELT-HGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 66 ~e~~~Ls-~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
+|..++. .++|||||++++ +++++. .+|+|||| .||+|.++|.... .+++.+++.++.||+.||.|||++|||
T Consensus 51 ~e~~~l~~~~~hp~Iv~~~~-~~~~~~---~~yivmEy~~~g~L~~~i~~~~-~~~e~~~~~~~~qi~~al~ylH~~~ii 125 (320)
T d1xjda_ 51 VEKRVLSLAWEHPFLTHMFC-TFQTKE---NLFFVMEYLNGGDLMYHIQSCH-KFDLSRATFYAAEIILGLQFLHSKGIV 125 (320)
T ss_dssp HHHHHHHHHTTCTTBCCEEE-EEECSS---EEEEEEECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHHHTTCB
T ss_pred HHHHHHHHhCCCCcEEEEEE-EEccCC---ceeEEEeecCCCcHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 4444554 689999999999 665554 58999999 8999999996544 499999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++++||+|||+++.......
T Consensus 126 HrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~----------------------------------------------- 158 (320)
T d1xjda_ 126 YRDLKLDNILLDKDGHIKIADFGMCKENMLGDA----------------------------------------------- 158 (320)
T ss_dssp CCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC-----------------------------------------------
T ss_pred eccCcccceeecCCCceeccccchhhhcccccc-----------------------------------------------
Confidence 999999999999999999999988843221100
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..|+.++|||||||++||
T Consensus 159 -------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 195 (320)
T d1xjda_ 159 -------------------------------------------KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYE 195 (320)
T ss_dssp -------------------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHH
Confidence 0012478999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccC-chHHHHHHHcCCCCCCCCCChH-HHHcCcccCCC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKF-PKEASFCLWLLHPEPSGRPKMG-ELLQSEFLNEP 367 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~-eiL~hp~~~~~ 367 (720)
|++ ||.+.... ..+..+....+ .++... +...+||.+||.+||.+|||+. |+++||||++.
T Consensus 196 mltG~~PF~~~~~~-~~~~~i~~~~~--~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~ 261 (320)
T d1xjda_ 196 MLIGQSPFHGQDEE-ELFHSIRMDNP--FYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 261 (320)
T ss_dssp HHHSSCSSCCSSHH-HHHHHHHHCCC--CCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred HHhCCCCCCCCCHH-HHHHHHHcCCC--CCCccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccC
Confidence 999 78765544 44444444322 222333 4455999999999999999995 89999999986
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-40 Score=349.80 Aligned_cols=207 Identities=19% Similarity=0.263 Sum_probs=167.7
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..+|.+++|||||++++ ++++.. .+|+|||| .|++|.++|...+..+++.+++.|+.||+.||.|||++||+
T Consensus 49 ~~Ei~il~~l~HpnIv~~~~-~~~~~~---~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~ii 124 (321)
T d1tkia_ 49 KKEISILNIARHRNILHLHE-SFESME---ELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIG 124 (321)
T ss_dssp HHHHHHHHHSCCTTBCCEEE-EEEETT---EEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred HHHHHHHHhCCCCCCCeEEE-EEEECC---EEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 37788999999999999999 665553 68999999 88999999976665699999999999999999999999999
Q ss_pred eccCCCCcEEEccC--CceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 144 VHNVRPSCFVMSSF--NHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 144 HrDLKP~NILl~~~--~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||+|||++.+ +.+|++|||++.......
T Consensus 125 HrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~---------------------------------------------- 158 (321)
T d1tkia_ 125 HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD---------------------------------------------- 158 (321)
T ss_dssp CCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC----------------------------------------------
T ss_pred cccccccceeecCCCceEEEEcccchhhccccCC----------------------------------------------
Confidence 99999999999854 479998888774321110
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..|+.++|||||||++
T Consensus 159 ---------------------------------------------~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvil 193 (321)
T d1tkia_ 159 ---------------------------------------------NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLV 193 (321)
T ss_dssp ---------------------------------------------EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccccccccccccchhccCCCCCchhhcccHHHHH
Confidence 00114689999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCC--CCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRV--LPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~--~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+|++ ||...... ..+..+.+.. ++......++ ...+||.+||.+||.+|||+.|+|+||||++.
T Consensus 194 y~ll~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~ 264 (321)
T d1tkia_ 194 YVLLSGINPFLAETNQ-QIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK 264 (321)
T ss_dssp HHHHHSSCTTCCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred HHHHhCCCCCCCCCHH-HHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence 99999 77766554 3444444332 3333444444 44599999999999999999999999999765
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-39 Score=336.22 Aligned_cols=204 Identities=14% Similarity=0.147 Sum_probs=158.6
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCce
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIV 143 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIv 143 (720)
.+|..++++++|||||++++ ++..+. .+|+|||| .+|+|.+++......+++..++.|+.||+.||.|||+++|+
T Consensus 48 ~~E~~~l~~l~HpnIv~~~g-~~~~~~---~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~ii 123 (263)
T d1sm2a_ 48 IEEAEVMMKLSHPKLVQLYG-VCLEQA---PICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVI 123 (263)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHhcCCCCcccccc-eeccCC---ceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhcccee
Confidence 47888999999999999999 554443 57999999 89999999977667799999999999999999999999999
Q ss_pred eccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCccc
Q 004998 144 VHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEA 223 (720)
Q Consensus 144 HrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~ 223 (720)
||||||+|||++.++.+||+|||+++........
T Consensus 124 HrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~---------------------------------------------- 157 (263)
T d1sm2a_ 124 HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT---------------------------------------------- 157 (263)
T ss_dssp CTTCSGGGEEECGGGCEEECSCC---------------------------------------------------------
T ss_pred ecccchhheeecCCCCeEecccchheeccCCCce----------------------------------------------
Confidence 9999999999999999999988887432111000
Q ss_pred ccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhh
Q 004998 224 SCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFE 303 (720)
Q Consensus 224 ~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~e 303 (720)
......||+.|+|||++.+..|+.++|||||||++||
T Consensus 158 -------------------------------------------~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~e 194 (263)
T d1sm2a_ 158 -------------------------------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE 194 (263)
T ss_dssp --------------------------------------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred -------------------------------------------eecceecCcccCChHHhcCCCCCchhhhcchHHHHHH
Confidence 0011468999999999999999999999999999999
Q ss_pred ccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 304 LFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 304 Llt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|+| |+............+..+..++......+...+|+.+||++||++|||++||++|
T Consensus 195 l~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 255 (263)
T d1sm2a_ 195 VFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255 (263)
T ss_dssp HHTTSCCTTCSCCHHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHCCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 998 4444444445566666554433333333455699999999999999999999874
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-39 Score=340.29 Aligned_cols=211 Identities=13% Similarity=0.143 Sum_probs=157.9
Q ss_pred ehhhhc---ccCCCCCceecccceeec-CCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 66 SDGVEL---THGDHLRNQGGLSGVCEN-EAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 66 ~e~~~L---s~l~HpnIV~l~~~~~~~-~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+|..+| +..+|||||++++++... ......+|++||| .++.+..........+++..++.++.||+.||+|||++
T Consensus 56 ~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~ 135 (305)
T d1blxa_ 56 REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH 135 (305)
T ss_dssp HHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhcCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 444454 445899999999944322 2233468999999 55555544455566699999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|||||||||+|||++..+.+||+|||++.......
T Consensus 136 ~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~--------------------------------------------- 170 (305)
T d1blxa_ 136 RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM--------------------------------------------- 170 (305)
T ss_dssp TCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG---------------------------------------------
T ss_pred CEEecCCCccEEEEcCCCCeeecchhhhhhhcccc---------------------------------------------
Confidence 99999999999999999999999988773211000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVL 300 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.+..|+.++|||||||+
T Consensus 171 ----------------------------------------------~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~i 204 (305)
T d1blxa_ 171 ----------------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 204 (305)
T ss_dssp ----------------------------------------------GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHH
T ss_pred ----------------------------------------------cCCCcccChhhcCcchhcCCCCChhehhhchHHH
Confidence 0012478999999999999999999999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhc-CCC-----------------------CccccccCc-hHHHHHHHcCCCCCCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRH-RVL-----------------------PPQLLLKFP-KEASFCLWLLHPEPSGR 352 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~-~~~-----------------------p~~~~~~~p-~~~~li~~~L~~dP~~R 352 (720)
+|||++ ||............+.. +.. .+.+....+ ...+||.+||++||++|
T Consensus 205 l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R 284 (305)
T d1blxa_ 205 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 284 (305)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTS
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHC
Confidence 999999 77765544322222111 000 011122223 34599999999999999
Q ss_pred CChHHHHcCcccCCC
Q 004998 353 PKMGELLQSEFLNEP 367 (720)
Q Consensus 353 pta~eiL~hp~~~~~ 367 (720)
||+.|+|+||||++.
T Consensus 285 ~sa~e~L~Hpff~~i 299 (305)
T d1blxa_ 285 ISAYSALSHPYFQDL 299 (305)
T ss_dssp CCHHHHHTSGGGTTC
T ss_pred cCHHHHhcChhhcCc
Confidence 999999999999876
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8e-40 Score=349.88 Aligned_cols=210 Identities=18% Similarity=0.244 Sum_probs=159.5
Q ss_pred ehhhhccc-CCCCCceecccceeec-CCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 66 SDGVELTH-GDHLRNQGGLSGVCEN-EAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 66 ~e~~~Ls~-l~HpnIV~l~~~~~~~-~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+|..++.+ .+|||||++++ ++++ ......+|+|||| .||+|.++|.+. ...+++.+++.|+.||+.||.|||++|
T Consensus 53 ~E~~~~~~~~~hpnIv~l~~-~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~ 131 (335)
T d2ozaa1 53 REVELHWRASQCPHIVRIVD-VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN 131 (335)
T ss_dssp HHHHHHHHHTTSTTBCCEEE-EEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCCCCeEEE-EEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcC
Confidence 56666554 58999999999 5543 2233468999999 789999999654 356999999999999999999999999
Q ss_pred ceeccCCCCcEEEcc---CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 142 IVVHNVRPSCFVMSS---FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 142 IvHrDLKP~NILl~~---~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
|+||||||+|||++. .+.+||+|||+++......
T Consensus 132 iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~------------------------------------------- 168 (335)
T d2ozaa1 132 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN------------------------------------------- 168 (335)
T ss_dssp EECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCC-------------------------------------------
T ss_pred CccccccccccccccccccccccccccceeeeccCCC-------------------------------------------
Confidence 999999999999985 4579998888874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLG 298 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLG 298 (720)
.....+||+.|+|||++.+..|+.++||||||
T Consensus 169 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlG 200 (335)
T d2ozaa1 169 ------------------------------------------------SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 200 (335)
T ss_dssp ------------------------------------------------CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHH
T ss_pred ------------------------------------------------ccccccCCcccCCcHHHcCCCCCHHHHHHhhc
Confidence 00114789999999999998899999999999
Q ss_pred hhhhhccc---cCCCCchH---HHHHHHhhcCC--CCccccccC-chHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEEK---TRTMSSLRHRV--LPPQLLLKF-PKEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~---~~~~~~l~~~~--~p~~~~~~~-p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
|+||+|++ ||.+.... ......+.... +|......+ +...+||.+||++||++|||+.|+|+||||.+.
T Consensus 201 vily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~ 278 (335)
T d2ozaa1 201 VIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 278 (335)
T ss_dssp HHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTT
T ss_pred hhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCC
Confidence 99999999 66543322 11222222222 232233333 445599999999999999999999999999754
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.2e-39 Score=340.72 Aligned_cols=208 Identities=13% Similarity=0.128 Sum_probs=165.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ +++++ .+|+|||| .+|+|.+++......+++.+++.|+.||+.||.|||++|
T Consensus 55 ~~~~E~~il~~l~HpnIv~l~g-~~~~~----~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~ 129 (285)
T d1u59a_ 55 EMMREAQIMHQLDNPYIVRLIG-VCQAE----ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 129 (285)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEESS----SEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEee-eeccC----eEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 3447888999999999999999 56543 47999999 899999998666667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+||+|||+++..+..... .
T Consensus 130 iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~--------------------------------~----------- 166 (285)
T d1u59a_ 130 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY--------------------------------Y----------- 166 (285)
T ss_dssp EECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE--------------------------------E-----------
T ss_pred eecCcCchhheeeccCCceeeccchhhhcccccccc--------------------------------c-----------
Confidence 999999999999999999999999988544322100 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..++.++|||||||++
T Consensus 167 --------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l 202 (285)
T d1u59a_ 167 --------------------------------------------TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM 202 (285)
T ss_dssp --------------------------------------------CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccccCccccChHHHhCCCCCccchhhcchHHH
Confidence 000113689999999999988899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHH---cCccc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELL---QSEFL 364 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL---~hp~~ 364 (720)
|||+| ||...... ..+..+..+..++.. ..+| ...+||.+||+.||++|||+.+|+ +|+|+
T Consensus 203 ~E~lt~G~~Pf~~~~~~-~~~~~i~~~~~~~~p-~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~ 271 (285)
T d1u59a_ 203 WEALSYGQKPYKKMKGP-EVMAFIEQGKRMECP-PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 271 (285)
T ss_dssp HHHHTTSCCTTTTCCTH-HHHHHHHTTCCCCCC-TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCC-CcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 99987 67665443 455556655444433 3444 445999999999999999998885 45554
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-39 Score=339.75 Aligned_cols=201 Identities=13% Similarity=0.139 Sum_probs=159.8
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|++++|||||++++ +++++ .+|+|||| .+|+|.+++.+.. .+++.+++.|+.||+.||.|||++||
T Consensus 55 ~~~E~~il~~l~HpnIv~~~g-~~~~~----~~~lvmE~~~~g~L~~~l~~~~-~l~~~~~~~i~~qi~~gl~ylH~~~i 128 (277)
T d1xbba_ 55 LLAEANVMQQLDNPYIVRMIG-ICEAE----SWMLVMEMAELGPLNKYLQQNR-HVKDKNIIELVHQVSMGMKYLEESNF 128 (277)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EEESS----SEEEEEECCTTEEHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHHhCCCCCCceEEE-EeccC----CEEEEEEcCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHhhHHhCCc
Confidence 447888999999999999999 56543 46899999 8999999996544 49999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+|||++.++.+|++|||+++........
T Consensus 129 iHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~--------------------------------------------- 163 (277)
T d1xbba_ 129 VHRDLAARNVLLVTQHYAKISDFGLSKALRADENY--------------------------------------------- 163 (277)
T ss_dssp ECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE---------------------------------------------
T ss_pred ccCCCcchhhcccccCcccccchhhhhhccccccc---------------------------------------------
Confidence 99999999999999999999988887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
. .......||+.|+|||++.+..++.++|||||||++|
T Consensus 164 ~------------------------------------------~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ 201 (277)
T d1xbba_ 164 Y------------------------------------------KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 201 (277)
T ss_dssp E------------------------------------------EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHH
T ss_pred c------------------------------------------ccccccCCCceecCchhhcCCCCCchhhhccchhhhh
Confidence 0 0001146899999999999988999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHH
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL 359 (720)
||++ ||...... .....+..+..++. +..+|. ..+||.+||+.||.+|||+++|+
T Consensus 202 ellt~g~~Pf~~~~~~-~~~~~i~~~~~~~~-p~~~~~~~~~li~~cl~~dp~~RPs~~~i~ 261 (277)
T d1xbba_ 202 EAFSYGQKPYRGMKGS-EVTAMLEKGERMGC-PAGCPREMYDLMNLCWTYDVENRPGFAAVE 261 (277)
T ss_dssp HHHTTTCCSSTTCCHH-HHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred HHhhCCCCCCCCCCHH-HHHHHHHcCCCCCC-CcccCHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence 9987 67665443 45555555544433 334444 45999999999999999999984
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.1e-39 Score=337.10 Aligned_cols=203 Identities=19% Similarity=0.178 Sum_probs=163.0
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
..+|+.+|++++|||||++++ ++.++. .+|++||| .+|+|.++|. .....+++..++.|+.||+.||.|||++|
T Consensus 60 ~~~E~~il~~l~HpnIv~~~~-~~~~~~---~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~ 135 (287)
T d1opja_ 60 FLKEAAVMKEIKHPNLVQLLG-VCTREP---PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN 135 (287)
T ss_dssp HHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCCCEecCCc-cEeeCC---eeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC
Confidence 347888999999999999999 555543 56999999 8999999994 44556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+||||+.++.+||+|||+++........
T Consensus 136 iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~-------------------------------------------- 171 (287)
T d1opja_ 136 FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT-------------------------------------------- 171 (287)
T ss_dssp CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSE--------------------------------------------
T ss_pred cccCccccCeEEECCCCcEEEccccceeecCCCCce--------------------------------------------
Confidence 999999999999999999999988887543211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
......||+.|+|||++.+..|+.++|||||||++
T Consensus 172 ---------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l 206 (287)
T d1opja_ 172 ---------------------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL 206 (287)
T ss_dssp ---------------------------------------------EETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHH
T ss_pred ---------------------------------------------eeccccccccccChHHHcCCCCCchhhhhhHHHHH
Confidence 00113578999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||............+..+..++. +..+| ...+|+.+||+.||.+|||+.||++
T Consensus 207 ~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~ 268 (287)
T d1opja_ 207 WEIATYGMSPYPGIDLSQVYELLEKDYRMER-PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268 (287)
T ss_dssp HHHHTTSCCSSTTCCHHHHHHHHHTTCCCCC-CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCcchHHHHHHHHhcCCCCCC-CccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 99998 55555555555555555544333 33444 4459999999999999999999976
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=4.9e-39 Score=338.48 Aligned_cols=208 Identities=14% Similarity=0.167 Sum_probs=157.6
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ ++..+. .+|+|||| .+|+|.+++......+++.+++.|+.||+.||.|||++|
T Consensus 73 ~~~~E~~~l~~l~HpnIv~l~g-~~~~~~---~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~ 148 (299)
T d1jpaa_ 73 DFLSEASIMGQFDHPNVIHLEG-VVTKST---PVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN 148 (299)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCCccEEE-EEeeCC---EEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCC
Confidence 4458899999999999999999 554443 57999999 899999999776667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+||||+.++.+||+|||+++........
T Consensus 149 iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~-------------------------------------------- 184 (299)
T d1jpaa_ 149 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSD-------------------------------------------- 184 (299)
T ss_dssp CCCSCCCGGGEEECTTCCEEECCC--------------------------------------------------------
T ss_pred CccCccccceEEECCCCcEEECCcccceEccCCCCc--------------------------------------------
Confidence 999999999999999999999998887543211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.+. .......||+.|+|||++.+..|+.++|||||||+|
T Consensus 185 ~~~-----------------------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl 223 (299)
T d1jpaa_ 185 PTY-----------------------------------------TSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVM 223 (299)
T ss_dssp ----------------------------------------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHH
T ss_pred cee-----------------------------------------eecccccCCccccCHHHHhcCCCCcccccccchHHH
Confidence 000 000113679999999999999999999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||+| ||...... ..+..+..+..++......+...+|+.+||+.||.+|||+.||++
T Consensus 224 ~el~t~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~ 285 (299)
T d1jpaa_ 224 WEVMSYGERPYWDMTNQ-DVINAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVN 285 (299)
T ss_dssp HHHHTTSCCTTTTCCHH-HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHhCCCCCCCCCCHH-HHHHHHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 99997 66655443 445555554444433333334459999999999999999999986
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-40 Score=340.84 Aligned_cols=207 Identities=14% Similarity=0.141 Sum_probs=164.1
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC-CCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK-PKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~-~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|++++|||||++++ ++.++ .+|+|||| .+|+|.+++.. ....+++.+++.|+.||+.||.|||++||
T Consensus 56 ~~E~~~l~~l~HpnIv~~~g-~~~~~----~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~i 130 (272)
T d1qpca_ 56 LAEANLMKQLQHQRLVRLYA-VVTQE----PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNY 130 (272)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred HHHHHHHHhCCCCCEeEEEe-eeccC----CeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 47888999999999999999 55443 46899999 99999998833 22358999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||||+.++.+||+|||+++........
T Consensus 131 vHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~--------------------------------------------- 165 (272)
T d1qpca_ 131 IHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT--------------------------------------------- 165 (272)
T ss_dssp ECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE---------------------------------------------
T ss_pred ccCccchhheeeecccceeeccccceEEccCCccc---------------------------------------------
Confidence 99999999999999999999988887432111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 166 --------------------------------------------~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ 201 (272)
T d1qpca_ 166 --------------------------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 201 (272)
T ss_dssp --------------------------------------------CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred --------------------------------------------cccccCCcccccChHHHhCCCCCchhhhhhhHHHHH
Confidence 001136899999999999888999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc--CcccC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ--SEFLN 365 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~--hp~~~ 365 (720)
||+| |+.........+..+..+..++......+...+|+.+||+.||++|||+.||++ ++||+
T Consensus 202 ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~ft 269 (272)
T d1qpca_ 202 EIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (272)
T ss_dssp HHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHhcCCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence 9998 444444455566666665444433223334559999999999999999999987 67764
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.7e-39 Score=336.46 Aligned_cols=214 Identities=17% Similarity=0.223 Sum_probs=165.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ ++.++. .+|+||||.++++.+++ ......+++.+++.++.||+.||.|||++|
T Consensus 47 ~~~~Ei~il~~l~Hp~Iv~~~~-~~~~~~---~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~ 122 (298)
T d1gz8a_ 47 TAIREISLLKELNHPNIVKLLD-VIHTEN---KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 122 (298)
T ss_dssp HHHHHHHHHTTCCCTTBCCEEE-EEEETT---EEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCcEEEecc-cccccc---ceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCC
Confidence 4457889999999999999999 555543 68999999767777766 444556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.+||+|||.++....+. +
T Consensus 123 IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~---------------------------------~------------ 157 (298)
T d1gz8a_ 123 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---------------------------------R------------ 157 (298)
T ss_dssp CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS---------------------------------B------------
T ss_pred EEccccCchheeecccCcceeccCCcceeccCCc---------------------------------c------------
Confidence 9999999999999999999999998874321110 0
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVL 300 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvl 300 (720)
......||+.|+|||++.... ++.++|||||||+
T Consensus 158 ---------------------------------------------~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvi 192 (298)
T d1gz8a_ 158 ---------------------------------------------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 192 (298)
T ss_dssp ---------------------------------------------CTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred ---------------------------------------------cceeecccceeeehhhhccccCCCccccccccchh
Confidence 001147899999999987776 5899999999999
Q ss_pred hhhccc---cCCCCchHHHHHHHhhcCCCCcc---------------------------ccccCchHHHHHHHcCCCCCC
Q 004998 301 LFELFC---PFSTGEEKTRTMSSLRHRVLPPQ---------------------------LLLKFPKEASFCLWLLHPEPS 350 (720)
Q Consensus 301 l~eLlt---pf~~~~~~~~~~~~l~~~~~p~~---------------------------~~~~~p~~~~li~~~L~~dP~ 350 (720)
+|+|++ ||...+........+.....+.. .....+...+|+.+||++||.
T Consensus 193 ly~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~ 272 (298)
T d1gz8a_ 193 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPN 272 (298)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTT
T ss_pred hhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChh
Confidence 999999 77766554333332221000000 011123445999999999999
Q ss_pred CCCChHHHHcCcccCCCccc
Q 004998 351 GRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 351 ~Rpta~eiL~hp~~~~~~~~ 370 (720)
+|||+.|+|+||||++...+
T Consensus 273 ~R~t~~ell~H~ff~~~~~p 292 (298)
T d1gz8a_ 273 KRISAKAALAHPFFQDVTKP 292 (298)
T ss_dssp TSCCHHHHHTSGGGTTCCCC
T ss_pred HCcCHHHHhCCHhhccCCCC
Confidence 99999999999999987554
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.9e-39 Score=343.32 Aligned_cols=205 Identities=15% Similarity=0.119 Sum_probs=160.4
Q ss_pred eeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC----------------------CCCC
Q 004998 64 KHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK----------------------RSVD 119 (720)
Q Consensus 64 ~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~----------------------~~l~ 119 (720)
..+|..+|.++ +|||||++++ ++.+.. .+|+|||| .||+|.++|.... ..++
T Consensus 87 ~~~E~~~l~~l~~HpnIv~l~~-~~~~~~---~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 162 (325)
T d1rjba_ 87 LMSELKMMTQLGSHENIVNLLG-ACTLSG---PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 162 (325)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHTTTTCC---------------------CC
T ss_pred HHHHHHHHHHhcCCCcEeEEEE-EEeeCC---eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCC
Confidence 34677788887 8999999999 555544 57999999 9999999995432 2489
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhH
Q 004998 120 VYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDML 199 (720)
Q Consensus 120 ~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (720)
+.+++.|+.||+.||.|||++|||||||||+|||++.++.+||+|||+++......
T Consensus 163 ~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~------------------------ 218 (325)
T d1rjba_ 163 FEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDS------------------------ 218 (325)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCT------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEEEeeccccccccCCC------------------------
Confidence 99999999999999999999999999999999999999999999888874321110
Q ss_pred hhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccC
Q 004998 200 QRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYAS 279 (720)
Q Consensus 200 ~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 279 (720)
.. .......||+.|||
T Consensus 219 ---------~~-------------------------------------------------------~~~~~~~gt~~y~a 234 (325)
T d1rjba_ 219 ---------NY-------------------------------------------------------VVRGNARLPVKWMA 234 (325)
T ss_dssp ---------TS-------------------------------------------------------EEETTEEECGGGCC
T ss_pred ---------ce-------------------------------------------------------eeeccccCCCccCC
Confidence 00 00011468999999
Q ss_pred CccccCCCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCC
Q 004998 280 PEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 280 PE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpt 354 (720)
||++.+..|+.++|||||||+||||++ ||............+..+..++ .+..+| ...+||.+||+.||++|||
T Consensus 235 PE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~-~p~~~~~~l~~li~~cl~~dP~~RPt 313 (325)
T d1rjba_ 235 PESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMD-QPFYATEEIYIIMQSCWAFDSRKRPS 313 (325)
T ss_dssp HHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred hHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCC-CCCcCCHHHHHHHHHHcCCChhHCcC
Confidence 999999999999999999999999996 6766554444444444443333 333444 4559999999999999999
Q ss_pred hHHHHcC
Q 004998 355 MGELLQS 361 (720)
Q Consensus 355 a~eiL~h 361 (720)
++||++|
T Consensus 314 ~~ei~~~ 320 (325)
T d1rjba_ 314 FPNLTSF 320 (325)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999874
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-39 Score=334.23 Aligned_cols=202 Identities=18% Similarity=0.270 Sum_probs=157.5
Q ss_pred eeeeehhhhcccCC--CCCceecccceeecCCCCCcEEEEEec-CC-CCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Q 004998 62 LRKHSDGVELTHGD--HLRNQGGLSGVCENEAAIDPFVHAIEW-GD-VSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAA 137 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~--HpnIV~l~~~~~~~~~~~~~~~lv~E~-~g-gsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yL 137 (720)
.|..+|..+|++++ |||||++++ ++++.. .+|+|||| .+ ++|.+++.+.. .+++.+++.++.||+.||+||
T Consensus 52 ~~~~~E~~il~~l~~~h~nIv~~~~-~~~~~~---~~~lv~e~~~~~~~l~~~~~~~~-~l~e~~~~~~~~qi~~al~~l 126 (273)
T d1xwsa_ 52 TRVPMEVVLLKKVSSGFSGVIRLLD-WFERPD---SFVLILERPEPVQDLFDFITERG-ALQEELARSFFWQVLEAVRHC 126 (273)
T ss_dssp CEEEHHHHHHHHHCSSSCSBCCEEE-EEECSS---EEEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCccEEEE-EEeeCC---eEEEEEEeccCcchHHHHHhccC-CCCHHHHHHHHHHHHHHHHHH
Confidence 45668888998876 999999999 665554 57999999 44 68888885543 499999999999999999999
Q ss_pred HHcCceeccCCCCcEEEcc-CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCC
Q 004998 138 HSQGIVVHNVRPSCFVMSS-FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAP 216 (720)
Q Consensus 138 Hs~gIvHrDLKP~NILl~~-~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~ 216 (720)
|++|||||||||+|||++. .+.+||+|||++......
T Consensus 127 H~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~------------------------------------------ 164 (273)
T d1xwsa_ 127 HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------------------------------------ 164 (273)
T ss_dssp HHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSS------------------------------------------
T ss_pred HHCCCccccCcccceEEecCCCeEEECccccceecccc------------------------------------------
Confidence 9999999999999999985 478999988887321100
Q ss_pred CCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC-Cccccch
Q 004998 217 TNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV-SCASDIY 295 (720)
Q Consensus 217 ~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-s~~sDIw 295 (720)
......||+.|+|||++.+..+ +.++|||
T Consensus 165 --------------------------------------------------~~~~~~GT~~y~aPE~~~~~~~~~~~~Diw 194 (273)
T d1xwsa_ 165 --------------------------------------------------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVW 194 (273)
T ss_dssp --------------------------------------------------CBCCCCSCGGGSCHHHHHHSCBCHHHHHHH
T ss_pred --------------------------------------------------cccccccCCCcCCHHHHcCCCCCCcccccc
Confidence 0011478999999999987764 6789999
Q ss_pred hhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcCcccCCCc
Q 004998 296 RLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQSEFLNEPR 368 (720)
Q Consensus 296 SLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~ 368 (720)
||||++|||++ ||.... ..... ...+++. ..++..+||.+||.+||++|||++|+|+||||++..
T Consensus 195 SlGvilyell~g~~Pf~~~~---~i~~~--~~~~~~~---~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~~ 262 (273)
T d1xwsa_ 195 SLGILLYDMVCGDIPFEHDE---EIIRG--QVFFRQR---VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL 262 (273)
T ss_dssp HHHHHHHHHHHSSCSCCSHH---HHHHC--CCCCSSC---CCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred cceeeehhHhhCCCCCCCch---HHhhc--ccCCCCC---CCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCCC
Confidence 99999999999 554422 21111 1112221 224445999999999999999999999999998764
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=3.7e-39 Score=335.68 Aligned_cols=213 Identities=18% Similarity=0.300 Sum_probs=162.8
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++.+.........+|+|||| .|++|.+++...+ .+++.+++.|+.||+.||+|||++|
T Consensus 53 ~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~-~l~~~~~~~i~~qi~~al~~lH~~~ 131 (277)
T d1o6ya_ 53 RFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSHQNG 131 (277)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 5568888999999999999999555444444468999999 8999999985544 4999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++.++++|||.+.........
T Consensus 132 iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~-------------------------------------------- 167 (277)
T d1o6ya_ 132 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS-------------------------------------------- 167 (277)
T ss_dssp EECCCCSGGGEEEETTSCEEECCCTTCEECC-------------------------------------------------
T ss_pred ccCccccCcccccCccccceeehhhhhhhhcccccc--------------------------------------------
Confidence 999999999999999999999998876332111000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......+||+.|+|||++.+..|++++|||||||++
T Consensus 168 -------------------------------------------~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvil 204 (277)
T d1o6ya_ 168 -------------------------------------------VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL 204 (277)
T ss_dssp ------------------------------------------------------TTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------------ccccccccCcccccCHHHHcCCCCCcceecccchHHH
Confidence 0001125799999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCcc-ccccCch-HHHHHHHcCCCCCCCCC-ChHHHHcCccc
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQ-LLLKFPK-EASFCLWLLHPEPSGRP-KMGELLQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~-~~~~~p~-~~~li~~~L~~dP~~Rp-ta~eiL~hp~~ 364 (720)
|||++ ||............+.....++. ....+|. ..+||.+||++||.+|| |++++ .|+|+
T Consensus 205 yelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l-~~~l~ 272 (277)
T d1o6ya_ 205 YEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM-RADLV 272 (277)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHH-HHHHH
T ss_pred HHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHH-HHHHH
Confidence 99999 78776666556666666555443 3344554 45999999999999999 55555 45654
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.6e-38 Score=338.70 Aligned_cols=211 Identities=16% Similarity=0.245 Sum_probs=163.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC---CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA---AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~---~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|..+|++++|||||++++ ++.... ....+|+||||.|.+|..+++.. .+++..++.+++||+.||.|||+
T Consensus 63 ~~~~Ei~il~~l~hpniv~l~~-~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~ 139 (346)
T d1cm8a_ 63 RAYRELRLLKHMRHENVIGLLD-VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIHA 139 (346)
T ss_dssp HHHHHHHHHHHCCBTTBCCCSE-EECSCSSTTTCCCCEEEEECCSEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCeeEEEE-EeccCccccccceEEEEEecccccHHHHHHhc--cccHHHHHHHHHHHHHHHHHHHh
Confidence 4447889999999999999999 554332 23467999999988999988543 39999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+|||||||||+|||++.++.+|++|||.+......
T Consensus 140 ~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~--------------------------------------------- 174 (346)
T d1cm8a_ 140 AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE--------------------------------------------- 174 (346)
T ss_dssp TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS---------------------------------------------
T ss_pred CCCcccccCcchhhcccccccccccccceeccCCc---------------------------------------------
Confidence 99999999999999999999999988887432110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLG 298 (720)
.+...||+.|+|||++.+.. ++.++||||||
T Consensus 175 ------------------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG 206 (346)
T d1cm8a_ 175 ------------------------------------------------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVG 206 (346)
T ss_dssp ------------------------------------------------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHH
T ss_pred ------------------------------------------------cccccccccccCHHHHcCCCCCCccchhhcch
Confidence 01147899999999997754 79999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhc-CCCC----------------------------ccccccCchHHHHHHHcCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRH-RVLP----------------------------PQLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~-~~~p----------------------------~~~~~~~p~~~~li~~~L~ 346 (720)
|++|||++ ||.+............. +..+ ..+....+...+||.+||+
T Consensus 207 vil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~ 286 (346)
T d1cm8a_ 207 CIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLV 286 (346)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSC
T ss_pred HHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCc
Confidence 99999999 67665443222211111 1110 0111223455699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCcc
Q 004998 347 PEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+||.+|||+.|+|+||||+...+
T Consensus 287 ~dP~~R~ta~eiL~Hp~f~~~~~ 309 (346)
T d1cm8a_ 287 LDAEQRVTAGEALAHPYFESLHD 309 (346)
T ss_dssp SSTTTSCCHHHHHHSGGGTTTC-
T ss_pred CChhHCcCHHHHhcChhhCcCCC
Confidence 99999999999999999998644
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-38 Score=330.10 Aligned_cols=204 Identities=18% Similarity=0.173 Sum_probs=156.2
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ ++.++ .+|+|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 54 ~~~~E~~~l~~l~HpnIv~l~~-~~~~~----~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ 128 (273)
T d1mp8a_ 54 KFLQEALTMRQFDHPHIVKLIG-VITEN----PVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKR 128 (273)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECSS----SCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEecC----eEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccC
Confidence 3447888999999999999999 55432 47999999 899999998666667999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+||+++.++.+||+|||+++.......
T Consensus 129 iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~--------------------------------------------- 163 (273)
T d1mp8a_ 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY--------------------------------------------- 163 (273)
T ss_dssp CCCSCCSGGGEEEEETTEEEECC---------------------------------------------------------
T ss_pred eeccccchhheeecCCCcEEEccchhheeccCCcc---------------------------------------------
Confidence 99999999999999999999998888743211100
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..|+.++|||||||++
T Consensus 164 --------------------------------------------~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil 199 (273)
T d1mp8a_ 164 --------------------------------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCM 199 (273)
T ss_dssp ---------------------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHH
T ss_pred --------------------------------------------eeccceecCcccchhhHhccCCCCCccccccchHHH
Confidence 000113679999999999999999999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||++ ||...... .....+..+..++......+...+||.+||.+||.+|||+.||+++
T Consensus 200 ~e~lt~g~~P~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~ 262 (273)
T d1mp8a_ 200 WEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 262 (273)
T ss_dssp HHHHTTSCCTTTTCCGG-GHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHhcCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 99987 56554443 4445555554444333333445599999999999999999999863
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=1.1e-37 Score=325.97 Aligned_cols=210 Identities=17% Similarity=0.215 Sum_probs=159.3
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
+..+|+.+|++++|||||++++ ++..+. .+|++|||.++.+...+......+++..++.|+.||+.||+|||++||
T Consensus 46 ~~~~E~~il~~l~hpnIv~~~~-~~~~~~---~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~I 121 (286)
T d1ob3a_ 46 TTIREISILKELKHSNIVKLYD-VIHTKK---RLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRV 121 (286)
T ss_dssp HHHHHHHGGGGCCCTTBCCEEE-EEECSS---CEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCCcEEeeee-ecccCC---ceeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcE
Confidence 4558889999999999999999 555543 579999995556666665555669999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+|||++.++.+|++|||.+...+.+..
T Consensus 122 vHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~---------------------------------------------- 155 (286)
T d1ob3a_ 122 LHRDLKPQNLLINREGELKIADFGLARAFGIPVR---------------------------------------------- 155 (286)
T ss_dssp CCSCCCGGGEEECTTSCEEECCTTHHHHHCC-------------------------------------------------
T ss_pred EecCCCCceeeEcCCCCEEecccccceecccCcc----------------------------------------------
Confidence 9999999999999999999999988733211100
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGVLL 301 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGvll 301 (720)
......|++.|+|||.+.+.. +++++|||||||++
T Consensus 156 --------------------------------------------~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l 191 (286)
T d1ob3a_ 156 --------------------------------------------KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIF 191 (286)
T ss_dssp --------------------------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHH
T ss_pred --------------------------------------------ccceecccchhhhHHHHhCCCCCCcceeehhcCcHH
Confidence 001146899999999997655 79999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhc-CCC-------------------------Ccccccc-CchHHHHHHHcCCCCCCC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRH-RVL-------------------------PPQLLLK-FPKEASFCLWLLHPEPSG 351 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~-~~~-------------------------p~~~~~~-~p~~~~li~~~L~~dP~~ 351 (720)
|||++ ||............... +.. .+.+... .+...+||.+||++||++
T Consensus 192 ~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~ 271 (286)
T d1ob3a_ 192 AEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQ 271 (286)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTT
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhH
Confidence 99999 77765544333222210 000 0111112 234459999999999999
Q ss_pred CCChHHHHcCcccCC
Q 004998 352 RPKMGELLQSEFLNE 366 (720)
Q Consensus 352 Rpta~eiL~hp~~~~ 366 (720)
|||+.|+|+||||++
T Consensus 272 R~s~~ell~Hp~f~~ 286 (286)
T d1ob3a_ 272 RITAKQALEHAYFKE 286 (286)
T ss_dssp SCCHHHHHTSGGGGC
T ss_pred CcCHHHHhcCcccCc
Confidence 999999999999974
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.1e-38 Score=323.03 Aligned_cols=201 Identities=15% Similarity=0.206 Sum_probs=163.3
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..++++++|||||++++ ++.+.. .+++|||| .+|+|.+++......+++..++.|+.||+.||.|||++||+|
T Consensus 48 ~Ev~~~~~l~HpnIv~~~g-~~~~~~---~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH 123 (258)
T d1k2pa_ 48 EEAKVMMNLSHEKLVQLYG-VCTKQR---PIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 123 (258)
T ss_dssp HHHHHHHTCCCTTBCCEEE-EECCSS---SEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred HHHHHHHhcCCCceeeEEE-EEeeCC---ceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCccc
Confidence 6888999999999999999 555443 58999999 889999998666666999999999999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
|||||+|||++.++.+||+|||+++........
T Consensus 124 ~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~----------------------------------------------- 156 (258)
T d1k2pa_ 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT----------------------------------------------- 156 (258)
T ss_dssp SCCSGGGEEECTTCCEEECCCSSCCBCSSSSCC-----------------------------------------------
T ss_pred ccccceeEEEcCCCcEEECcchhheeccCCCce-----------------------------------------------
Confidence 999999999999999999988887432111000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
......||+.|+|||++.+..++.++|||||||++|||
T Consensus 157 ------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el 194 (258)
T d1k2pa_ 157 ------------------------------------------SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 194 (258)
T ss_dssp ------------------------------------------CCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------eecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhH
Confidence 00114689999999999999999999999999999999
Q ss_pred cc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 305 FC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 305 lt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
+| ||...... .....+..+..++. +...| ...+||.+||+.||++|||+.+||+|
T Consensus 195 ~t~g~~Pf~~~~~~-~~~~~i~~~~~~~~-p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 254 (258)
T d1k2pa_ 195 YSLGKMPYERFTNS-ETAEHIAQGLRLYR-PHLASEKVYTIMYSCWHEKADERPTFKILLSN 254 (258)
T ss_dssp HTTSCCTTTTSCHH-HHHHHHHTTCCCCC-CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HhcCCCCCCCCCHH-HHHHHHHhCCCCCC-cccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 97 67666544 45555655543333 33444 44599999999999999999999986
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-37 Score=327.78 Aligned_cols=218 Identities=13% Similarity=0.166 Sum_probs=160.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecC----CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE----AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAH 138 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~----~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLH 138 (720)
+..+|..+|++++||||+++++++.... .....+|++|||.++.+...+......+++..++.+++||+.||.|||
T Consensus 55 ~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH 134 (318)
T d3blha1 55 TALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 134 (318)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhc
Confidence 4447888999999999999999443221 123468999999666666666566667999999999999999999999
Q ss_pred HcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 139 SQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 139 s~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
++|||||||||+|||++.++.+|++|||++...+..... ..
T Consensus 135 ~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~-------------------------------~~-------- 175 (318)
T d3blha1 135 RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS-------------------------------QP-------- 175 (318)
T ss_dssp HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC------------------------------------C--------
T ss_pred cCCEEecCcCchheeecCCCcEEeeecceeeeccccccc-------------------------------cc--------
Confidence 999999999999999999999999999988543222100 00
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSL 297 (720)
......+||++|+|||++.+. .|++++|||||
T Consensus 176 -----------------------------------------------~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSl 208 (318)
T d3blha1 176 -----------------------------------------------NRYTNRVVTLWYRPPELLLGERDYGPPIDLWGA 208 (318)
T ss_dssp -----------------------------------------------CCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHH
T ss_pred -----------------------------------------------ccccceecCHHHhhHHHHcCCCCCCcHHHcccC
Confidence 000114789999999999876 48999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHH--HhhcCCCCcccc-----------------------------ccCchHHHHHHH
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMS--SLRHRVLPPQLL-----------------------------LKFPKEASFCLW 343 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~--~l~~~~~p~~~~-----------------------------~~~p~~~~li~~ 343 (720)
||++|||++ ||.+......... .+.. .+++... ...+...+||.+
T Consensus 209 Gvil~el~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~ 287 (318)
T d3blha1 209 GCIMAEMWTRSPIMQGNTEQHQLALISQLCG-SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDK 287 (318)
T ss_dssp HHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC-CCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHH
T ss_pred CceeeeHhhCCCCCCCCCHHHHHHHHHHhcC-CCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHH
Confidence 999999999 6765544322211 1111 1111100 012344589999
Q ss_pred cCCCCCCCCCChHHHHcCcccCCC
Q 004998 344 LLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 344 ~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||++||++|||+.|+|+||||+..
T Consensus 288 mL~~dP~~R~sa~elL~Hpff~~~ 311 (318)
T d3blha1 288 LLVLDPAQRIDSDDALNHDFFWSD 311 (318)
T ss_dssp HSCSSTTTSCCHHHHHHSGGGSSS
T ss_pred HCcCChhHCcCHHHHHcChhhccC
Confidence 999999999999999999999864
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-37 Score=324.23 Aligned_cols=205 Identities=13% Similarity=0.144 Sum_probs=161.2
Q ss_pred eeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 64 KHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 64 ~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
..+|..+|++++|||||++++ ++.+.. .++++||| .+++|.+++......+++.++..++.||+.||.|||++||
T Consensus 56 ~~~E~~il~~l~H~nIv~~~g-~~~~~~---~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~i 131 (283)
T d1mqba_ 56 FLGEAGIMGQFSHHNIIRLEG-VISKYK---PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY 131 (283)
T ss_dssp HHHHHHHHHTCCCTTBCCEEE-EECSSS---SEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCCCCEeeeeE-EEecCC---ceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhcccccc
Confidence 347888999999999999999 554443 57999999 8999999886666679999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||||+.++.+||+|||+++........ .
T Consensus 132 iHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~-------------------------------~------------- 167 (283)
T d1mqba_ 132 VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA-------------------------------T------------- 167 (283)
T ss_dssp CCSCCCGGGEEECTTCCEEECCCCC-------------------------------------------------------
T ss_pred ccCccccceEEECCCCeEEEcccchhhcccCCCcc-------------------------------c-------------
Confidence 99999999999999999999988887432111000 0
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.......||+.|+|||++.+..++.++|||||||++|
T Consensus 168 -------------------------------------------~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~ 204 (283)
T d1mqba_ 168 -------------------------------------------YTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMW 204 (283)
T ss_dssp -------------------------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHH
T ss_pred -------------------------------------------eEeccCCCCccccCHHHHccCCCCCcccccccHHHHH
Confidence 0001136899999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||++ |+.........+..+..+..++.. ..+|. ..+|+.+||+.||++|||+.||++
T Consensus 205 el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~l~~li~~cl~~~p~~RPt~~eil~ 265 (283)
T d1mqba_ 205 EVMTYGERPYWELSNHEVMKAINDGFRLPTP-MDCPSAIYQLMMQCWQQERARRPKFADIVS 265 (283)
T ss_dssp HHHTTSCCTTTTCCHHHHHHHHHTTCCCCCC-TTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHhCCCCccccCCHHHHHHHHhccCCCCCc-hhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence 9998 555444455666666666554443 33444 459999999999999999999986
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-37 Score=333.37 Aligned_cols=214 Identities=16% Similarity=0.194 Sum_probs=160.3
Q ss_pred eehhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLD---KPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~---~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
.+|..+|++++|||||++++.++... ....++|+||||.+++|.+.+. .....+++.+++.|++||+.||+|||+
T Consensus 61 ~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~ 140 (350)
T d1q5ka_ 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140 (350)
T ss_dssp CHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 36888999999999999999554332 2344689999996666665552 344569999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCC-ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTN 218 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~ 218 (720)
+|||||||||+|||++.++ .+||+|||++.......
T Consensus 141 ~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~------------------------------------------- 177 (350)
T d1q5ka_ 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE------------------------------------------- 177 (350)
T ss_dssp TTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTS-------------------------------------------
T ss_pred cCCcccCCCcceEEEecCCCceeEecccchhhccCCc-------------------------------------------
Confidence 9999999999999999775 89999888874321110
Q ss_pred CCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhh
Q 004998 219 DLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRL 297 (720)
Q Consensus 219 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSL 297 (720)
.....+||+.|+|||++.+. .|+.++|||||
T Consensus 178 ------------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSl 209 (350)
T d1q5ka_ 178 ------------------------------------------------PNVSYICSRYYRAPELIFGATDYTSSIDVWSA 209 (350)
T ss_dssp ------------------------------------------------CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHH
T ss_pred ------------------------------------------------ccccccccccccChHHhhcccCCCcceeeccc
Confidence 00114789999999998765 58999999999
Q ss_pred hhhhhhccc---cCCCCchHHHHHHHhhc------------------CCCCcc---------ccccCchHHHHHHHcCCC
Q 004998 298 GVLLFELFC---PFSTGEEKTRTMSSLRH------------------RVLPPQ---------LLLKFPKEASFCLWLLHP 347 (720)
Q Consensus 298 Gvll~eLlt---pf~~~~~~~~~~~~l~~------------------~~~p~~---------~~~~~p~~~~li~~~L~~ 347 (720)
||++|||++ ||............+.. ..++.. .....+...+||.+||.+
T Consensus 210 G~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~ 289 (350)
T d1q5ka_ 210 GCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 289 (350)
T ss_dssp HHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCS
T ss_pred ceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccC
Confidence 999999999 67665544332222110 001100 011234556999999999
Q ss_pred CCCCCCChHHHHcCcccCCCcc
Q 004998 348 EPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
||.+|||+.|+|+||||++..+
T Consensus 290 dP~~R~ta~e~L~Hp~f~~~~~ 311 (350)
T d1q5ka_ 290 TPTARLTPLEACAHSFFDELRD 311 (350)
T ss_dssp SGGGSCCHHHHHTSGGGGGGGC
T ss_pred ChhHCcCHHHHhcCHhhccccC
Confidence 9999999999999999987643
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9e-38 Score=335.54 Aligned_cols=218 Identities=15% Similarity=0.151 Sum_probs=163.4
Q ss_pred eeeehhhhcccCCCCCceecccceeecCC--CCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEA--AIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~--~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|..+|.+++|||||++++ ++.... ....+|++|++.|++|.+++... .+++.+++.++.||+.||+|||++
T Consensus 52 ~~~~Ei~il~~l~hp~iv~~~~-~~~~~~~~~~~~~~l~~~~~~g~L~~~l~~~--~l~~~~i~~i~~qil~al~yLH~~ 128 (345)
T d1pmea_ 52 RTLREIKILLRFRHENIIGIND-IIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ--HLSNDHICYFLYQILRGLKYIHSA 128 (345)
T ss_dssp HHHHHHHHHHHCCCTTBCCCCE-EECCSSTTTCCCEEEEEECCCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCCcEEE-EEeeccccccceEEEEEeecCCchhhhhhcC--CCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3447888999999999999999 443332 22346777777999999999654 399999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|||||||||+|||++.++.+||+|||++.........
T Consensus 129 ~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~------------------------------------------- 165 (345)
T d1pmea_ 129 NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH------------------------------------------- 165 (345)
T ss_dssp TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCB-------------------------------------------
T ss_pred CCcCCCCCcceEEECCCCCEEEcccCceeeccCCCcc-------------------------------------------
Confidence 9999999999999999999999999887432111000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCC-CCCccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGA-PVSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~s~~sDIwSLGv 299 (720)
.......+||+.|+|||++... .+++++||||+||
T Consensus 166 --------------------------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~ 201 (345)
T d1pmea_ 166 --------------------------------------------TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC 201 (345)
T ss_dssp --------------------------------------------CCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHH
T ss_pred --------------------------------------------ceeeccccccceechHHHhhcCCCCCchhhhhccCc
Confidence 0000124789999999998554 4799999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcCCCC-------------------------c---c-ccccCchHHHHHHHcCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHRVLP-------------------------P---Q-LLLKFPKEASFCLWLLHP 347 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~~~p-------------------------~---~-~~~~~p~~~~li~~~L~~ 347 (720)
++|||++ ||............+.....+ . . +....++..+|+.+||++
T Consensus 202 il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~ 281 (345)
T d1pmea_ 202 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTF 281 (345)
T ss_dssp HHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCS
T ss_pred eehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccC
Confidence 9999999 776654433222221110000 0 0 112234556999999999
Q ss_pred CCCCCCChHHHHcCcccCCCccc
Q 004998 348 EPSGRPKMGELLQSEFLNEPRDS 370 (720)
Q Consensus 348 dP~~Rpta~eiL~hp~~~~~~~~ 370 (720)
||.+|||+.|+|+||||+....+
T Consensus 282 dP~~R~ta~e~L~hpf~~~~~~~ 304 (345)
T d1pmea_ 282 NPHKRIEVEQALAHPYLEQYYDP 304 (345)
T ss_dssp STTTSCCHHHHHTSGGGTTTCCG
T ss_pred ChhHCcCHHHHhcCHhhccCCCC
Confidence 99999999999999999976554
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.3e-38 Score=326.98 Aligned_cols=208 Identities=14% Similarity=0.141 Sum_probs=163.6
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHh-CCCCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLD-KPKRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~-~~~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..++++++|||||++++ ++.++ .+|+|||| .+|+|..++. .....+++.+++.|+.||+.||.|||++||
T Consensus 60 ~~E~~~l~~l~h~nIv~~~g-~~~~~----~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~i 134 (285)
T d1fmka3 60 LQEAQVMKKLRHEKLVQLYA-VVSEE----PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY 134 (285)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhcccCCEeEEEE-EEecC----CeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhhe
Confidence 36788999999999999999 55433 36899999 9999999883 233459999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
+||||||+||||+.++.+||+|||+++........
T Consensus 135 vH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~--------------------------------------------- 169 (285)
T d1fmka3 135 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYT--------------------------------------------- 169 (285)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCCTTC-----------------------------------------------------
T ss_pred ecccccceEEEECCCCcEEEcccchhhhccCCCce---------------------------------------------
Confidence 99999999999999999999999887433111000
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
......||+.|+|||++.+..++.++|||||||++|
T Consensus 170 --------------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~ 205 (285)
T d1fmka3 170 --------------------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT 205 (285)
T ss_dssp --------------------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred --------------------------------------------eeccccccccccChHHHhCCCCCcHHhhhcchHHHH
Confidence 001146899999999999999999999999999999
Q ss_pred hccc---cCCCCchHHHHHHHhhcCCCCccccccCch-HHHHHHHcCCCCCCCCCChHHHHc--CcccCCC
Q 004998 303 ELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPK-EASFCLWLLHPEPSGRPKMGELLQ--SEFLNEP 367 (720)
Q Consensus 303 eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~-~~~li~~~L~~dP~~Rpta~eiL~--hp~~~~~ 367 (720)
||++ ||.........+..+..+..++. ...+|+ ..+||.+||+.||++|||+.+|++ ++||+..
T Consensus 206 el~t~~~p~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~ 275 (285)
T d1fmka3 206 ELTTKGRVPYPGMVNREVLDQVERGYRMPC-PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 275 (285)
T ss_dssp HHHTTTCCSSTTCCHHHHHHHHHTTCCCCC-CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred HHHhCCCCCCCCCCHHHHHHHHHhcCCCCC-CcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCC
Confidence 9998 55444444455666665544443 344444 459999999999999999999988 8888765
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-37 Score=331.41 Aligned_cols=211 Identities=16% Similarity=0.198 Sum_probs=159.7
Q ss_pred eeeehhhhcccCCCCCceecccceeecC---CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENE---AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~---~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
+..+|+.+|++++|||||++++ ++... .....+++++++.|++|.+++... .+++.+++.|++||+.||+|||+
T Consensus 63 ~~~~Ei~il~~l~h~~iv~~~~-~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~~~--~l~e~~~~~i~~qil~aL~~LH~ 139 (348)
T d2gfsa1 63 RTYRELRLLKHMKHENVIGLLD-VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHS 139 (348)
T ss_dssp HHHHHHHHHHHCCCTTBCCCSE-EECSCSSTTTCCCCEEEEECCSEEHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCeeeEEE-EEeeccccccCceEEEEEeecCCchhhhcccc--cccHHHHHHHHHHHHHHHHHHHh
Confidence 4458899999999999999999 44332 223346666666999999999443 49999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.+|++|||.+...+..
T Consensus 140 ~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~--------------------------------------------- 174 (348)
T d2gfsa1 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--------------------------------------------- 174 (348)
T ss_dssp TTCCCCCCCGGGEEECTTCCEEECCC----CCTGG---------------------------------------------
T ss_pred CCCcccccCCccccccccccccccccchhcccCcc---------------------------------------------
Confidence 99999999999999999999999988877321100
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLG 298 (720)
.....||+.|+|||++.+.. ++.++||||||
T Consensus 175 ------------------------------------------------~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlG 206 (348)
T d2gfsa1 175 ------------------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 206 (348)
T ss_dssp ------------------------------------------------GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHH
T ss_pred ------------------------------------------------cccccccccccCchhhcCCccCCcccchhhhh
Confidence 01146899999999987765 68999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhcCCCC-c----------------------------cccccCchHHHHHHHcCC
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRHRVLP-P----------------------------QLLLKFPKEASFCLWLLH 346 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~~~~p-~----------------------------~~~~~~p~~~~li~~~L~ 346 (720)
|++|+|++ ||.+.+........+.....+ . .+....+...+||.+||+
T Consensus 207 v~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~ 286 (348)
T d2gfsa1 207 CIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 286 (348)
T ss_dssp HHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCc
Confidence 99999999 676655443322222211111 0 011233455699999999
Q ss_pred CCCCCCCChHHHHcCcccCCCcc
Q 004998 347 PEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 347 ~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
+||.+|||+.|+|+||||++...
T Consensus 287 ~dP~~R~ta~elL~Hp~f~~~~~ 309 (348)
T d2gfsa1 287 LDSDKRITAAQALAHAYFAQYHD 309 (348)
T ss_dssp SSGGGSCCHHHHHTSGGGTTTCC
T ss_pred CChhhCcCHHHHhcCHhhCCCCC
Confidence 99999999999999999998654
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-37 Score=326.64 Aligned_cols=204 Identities=15% Similarity=0.125 Sum_probs=162.5
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHH
Q 004998 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLH 125 (720)
Q Consensus 63 r~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~ 125 (720)
+..+|..+|+++ +|||||++++ ++.++. .+|+|||| .||+|.++|... ...+++..++.
T Consensus 56 ~~~~E~~~l~~l~~HpnIv~~~~-~~~~~~---~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 131 (309)
T d1fvra_ 56 DFAGELEVLCKLGHHPNIINLLG-ACEHRG---YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 131 (309)
T ss_dssp HHHHHHHHHTTCCCCTTBCCEEE-EEEETT---EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHH
T ss_pred HHHHHHHHHHhccCCCCEeeEEE-EEecCC---eeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHH
Confidence 345788899998 7999999999 555443 67999999 999999999543 34699999999
Q ss_pred HHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcc
Q 004998 126 IFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRL 205 (720)
Q Consensus 126 i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 205 (720)
++.||+.||.|||++|||||||||+|||++.++.+||+|||+++......
T Consensus 132 ~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~------------------------------ 181 (309)
T d1fvra_ 132 FAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV------------------------------ 181 (309)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEEC------------------------------
T ss_pred HHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEccccccccccccc------------------------------
Confidence 99999999999999999999999999999999999999888874321100
Q ss_pred cccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccC
Q 004998 206 RREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAG 285 (720)
Q Consensus 206 ~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 285 (720)
......||+.|+|||.+.+
T Consensus 182 -------------------------------------------------------------~~~~~~gt~~y~aPE~l~~ 200 (309)
T d1fvra_ 182 -------------------------------------------------------------KKTMGRLPVRWMAIESLNY 200 (309)
T ss_dssp -------------------------------------------------------------CC----CCTTTCCHHHHHH
T ss_pred -------------------------------------------------------------cccceecCCcccchHHhcc
Confidence 0001357999999999999
Q ss_pred CCCCccccchhhhhhhhhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 286 APVSCASDIYRLGVLLFELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 286 ~~~s~~sDIwSLGvll~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
..|+.++|||||||++|||++ |+.........+..+..+..++......+...+||.+||+.||++|||+.||+++
T Consensus 201 ~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 279 (309)
T d1fvra_ 201 SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS 279 (309)
T ss_dssp CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 999999999999999999998 3233344445666666665544433444556699999999999999999999974
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.7e-38 Score=322.51 Aligned_cols=199 Identities=16% Similarity=0.136 Sum_probs=156.2
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-KRSVDVYECLHIFRQIVEIVYAAHSQGI 142 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-~~~l~~~~~~~i~~QIl~aL~yLHs~gI 142 (720)
.+|..+|++++|||||++++.+.+... .+|+|||| .+|+|.++|.+. ...+++..++.|+.||+.||.|||+.+|
T Consensus 48 ~~E~~~l~~l~HpnIv~~~g~~~~~~~---~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~i 124 (262)
T d1byga_ 48 LAEASVMTQLRHSNLVQLLGVIVEEKG---GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNF 124 (262)
T ss_dssp HHTHHHHTTCCCTTBCCEEEEECCC-----CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCCCEeeEEEEEEecCC---cEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCce
Confidence 368889999999999999994444332 46999999 999999999432 2348999999999999999999999999
Q ss_pred eeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcc
Q 004998 143 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSE 222 (720)
Q Consensus 143 vHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~ 222 (720)
|||||||+|||++.++.+|++|||+++.....
T Consensus 125 vH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~------------------------------------------------ 156 (262)
T d1byga_ 125 VHRDLAARNVLVSEDNVAKVSDFGLTKEASST------------------------------------------------ 156 (262)
T ss_dssp CCSCCSGGGEEECTTSCEEECCCCC-------------------------------------------------------
T ss_pred eccccchHhheecCCCCEeecccccceecCCC------------------------------------------------
Confidence 99999999999999999999988877432110
Q ss_pred cccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhh
Q 004998 223 ASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLF 302 (720)
Q Consensus 223 ~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~ 302 (720)
.....+|+.|+|||++.+..+++++|||||||++|
T Consensus 157 ---------------------------------------------~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~ 191 (262)
T d1byga_ 157 ---------------------------------------------QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLW 191 (262)
T ss_dssp --------------------------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred ---------------------------------------------CccccccccCCChHHHhCCCCChHHHHHhHHHHHH
Confidence 00135688999999999889999999999999999
Q ss_pred hccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 303 ELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 303 eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
||+| ||... ........+..+..++......+...+||.+||+.||.+|||+.++++
T Consensus 192 el~t~~~~p~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~ 252 (262)
T d1byga_ 192 EIYSFGRVPYPRI-PLKDVVPRVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE 252 (262)
T ss_dssp HHHTTSCCSCTTS-CGGGHHHHHTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHCCCCCCCCC-CHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 9997 44433 333455566665555544444455569999999999999999999976
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-36 Score=316.81 Aligned_cols=213 Identities=15% Similarity=0.166 Sum_probs=162.8
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
-+..+|..+|++++|||||++++ ++.+.. .++++||+ .|++|..++.. .+.+++..++.++.|++.||+|||++
T Consensus 46 ~~~~~E~~il~~l~h~niv~~~~-~~~~~~---~~~iv~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~q~~~aL~~lH~~ 120 (292)
T d1unla_ 46 SSALREICLLKELKHKNIVRLHD-VLHSDK---KLTLVFEFCDQDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSR 120 (292)
T ss_dssp HHHHHHHHHHTTCCCTTBCCEEE-EEECSS---EEEEEEECCSEEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCcCCEEeecc-cccccc---ceeEEeeecccccccccccc-ccccchhHHHHHHHHHHHHHHHhhcC
Confidence 35558899999999999999999 565554 57999999 77777776644 44599999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|||||||||+|||++.++.+|++|||.+.........
T Consensus 121 ~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~------------------------------------------- 157 (292)
T d1unla_ 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC------------------------------------------- 157 (292)
T ss_dssp TEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSC-------------------------------------------
T ss_pred CEeeecccCcccccccCCceeeeecchhhcccCCCcc-------------------------------------------
Confidence 9999999999999999999999999988543221000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLGV 299 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLGv 299 (720)
.....+++.|+|||++.+.. ++.++|||||||
T Consensus 158 -----------------------------------------------~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~ 190 (292)
T d1unla_ 158 -----------------------------------------------YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGC 190 (292)
T ss_dssp -----------------------------------------------CCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHH
T ss_pred -----------------------------------------------ceeeccccchhhhhHhccCCCCCchhhccccch
Confidence 00135688899999998776 699999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhc--CCCC-------------------------cccccc-CchHHHHHHHcCCCC
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRH--RVLP-------------------------PQLLLK-FPKEASFCLWLLHPE 348 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~--~~~p-------------------------~~~~~~-~p~~~~li~~~L~~d 348 (720)
++|||++ ||.........+..+.. ...+ ...... .+...+|+.+||++|
T Consensus 191 il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~d 270 (292)
T d1unla_ 191 IFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCN 270 (292)
T ss_dssp HHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSS
T ss_pred HHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCC
Confidence 9999998 65544443333333221 0000 001112 234459999999999
Q ss_pred CCCCCChHHHHcCcccCCCcc
Q 004998 349 PSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 349 P~~Rpta~eiL~hp~~~~~~~ 369 (720)
|.+||||+|+|+||||++...
T Consensus 271 P~~R~sa~e~L~Hp~f~~~~~ 291 (292)
T d1unla_ 271 PVQRISAEEALQHPYFSDFCP 291 (292)
T ss_dssp GGGSCCHHHHTTSGGGSSCSC
T ss_pred hhHCcCHHHHhcChhhcCCCC
Confidence 999999999999999987643
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.8e-37 Score=322.19 Aligned_cols=205 Identities=16% Similarity=0.083 Sum_probs=159.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++|+ ++.++ .+++|||| .+++|.+++......+++..++.++.||+.||.|||++|
T Consensus 57 ~~~~Ei~~l~~l~H~nIv~~~g-~~~~~----~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ 131 (273)
T d1u46a_ 57 DFIREVNAMHSLDHRNLIRLYG-VVLTP----PMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKR 131 (273)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EECSS----SCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEEEEEE-EEeec----chheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCC
Confidence 3447888999999999999999 55543 36899999 899999988555556999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+|||++.++.+||+|||+++........
T Consensus 132 iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~-------------------------------------------- 167 (273)
T d1u46a_ 132 FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH-------------------------------------------- 167 (273)
T ss_dssp EECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCE--------------------------------------------
T ss_pred EeeeeecHHHhccccccceeeccchhhhhcccCCCc--------------------------------------------
Confidence 999999999999999999999999887543221000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
. .......||..|+|||++.+..++.++|||||||++
T Consensus 168 ------------------------~-------------------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil 204 (273)
T d1u46a_ 168 ------------------------Y-------------------VMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL 204 (273)
T ss_dssp ------------------------E-------------------EC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred ------------------------c-------------------eecCccccCcccCCHHHHhCCCCCcchhhhhhHHHH
Confidence 0 000113578899999999999899999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||++ ||...............+..++ .+..+| ...+||.+||++||++|||+.||++
T Consensus 205 ~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~ 267 (273)
T d1u46a_ 205 WEMFTYGQEPWIGLNGSQILHKIDKEGERLP-RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 267 (273)
T ss_dssp HHHHTTSCCTTTTCCHHHHHHHHHTSCCCCC-CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHhCCCCCCCCcCHHHHHHHHHhCCCCCC-CcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99997 6766555533333333443333 334444 4459999999999999999999863
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-37 Score=326.36 Aligned_cols=205 Identities=15% Similarity=0.116 Sum_probs=160.9
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++ ++.++ ..+++||+ .+++|.+++......+++..++.|+.||+.||.|||++|
T Consensus 57 ~~~~E~~~l~~l~HpnIv~l~g-~~~~~----~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ 131 (317)
T d1xkka_ 57 EILDEAYVMASVDNPHVCRLLG-ICLTS----TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRR 131 (317)
T ss_dssp HHHHHHHHHHHCCCTTBCCEEE-EEESS----SEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeeEEE-EEecC----CeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 3347888999999999999999 55444 35677777 999999999766677999999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
||||||||+|||++.++++||+|||+++........
T Consensus 132 iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~-------------------------------------------- 167 (317)
T d1xkka_ 132 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE-------------------------------------------- 167 (317)
T ss_dssp CCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC---------------------------------------------
T ss_pred cccCcchhhcceeCCCCCeEeeccccceeccccccc--------------------------------------------
Confidence 999999999999999999999988887433211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.......||+.|+|||++.+..|+.++|||||||++
T Consensus 168 --------------------------------------------~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil 203 (317)
T d1xkka_ 168 --------------------------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV 203 (317)
T ss_dssp ---------------------------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred --------------------------------------------ccccccccCccccChHHHhcCCCChhhhhhhHHHHH
Confidence 000113689999999999999999999999999999
Q ss_pred hhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 302 FELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 302 ~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||+| ||...... .....+..+..++......+...+|+.+||+.||.+|||+.||++|
T Consensus 204 ~el~t~g~~p~~~~~~~-~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 266 (317)
T d1xkka_ 204 WELMTFGSKPYDGIPAS-EISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 266 (317)
T ss_dssp HHHHTTSCCTTTTSCGG-GHHHHHHHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHCCCCCCCCCCHH-HHHHHHHcCCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence 99997 55544332 3455555554444333334455699999999999999999999975
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.2e-37 Score=328.87 Aligned_cols=214 Identities=19% Similarity=0.211 Sum_probs=157.2
Q ss_pred eeeeehhhhcccCCCCCceecccceeecC--CCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 004998 62 LRKHSDGVELTHGDHLRNQGGLSGVCENE--AAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS 139 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~--~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs 139 (720)
-|..+|..+|++++|||||++++++...+ ....++|+||||.+++|.+.+. ..+++.+++.+++||+.||.|||+
T Consensus 61 ~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~---~~~~~~~i~~~~~qil~gl~~LH~ 137 (355)
T d2b1pa1 61 KRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ---MELDHERMSYLLYQMLCGIKHLHS 137 (355)
T ss_dssp HHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEEeccchHHHHhhh---cCCCHHHHHHHHHHHHHHHHHhhh
Confidence 35568889999999999999999433222 1335789999996667777663 348999999999999999999999
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
+||+||||||+|||++.++.++++|||.++......
T Consensus 138 ~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~-------------------------------------------- 173 (355)
T d2b1pa1 138 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-------------------------------------------- 173 (355)
T ss_dssp TTCCCSCCCGGGEEECTTCCEEECCCCC----------------------------------------------------
T ss_pred cccccccCCccccccccccceeeechhhhhcccccc--------------------------------------------
Confidence 999999999999999999999999888763321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.....+||+.|+|||++.+..+++++||||+||
T Consensus 174 -----------------------------------------------~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~ 206 (355)
T d2b1pa1 174 -----------------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 206 (355)
T ss_dssp ------------------------------------------------------CCTTCCHHHHTTCCCCTTHHHHHHHH
T ss_pred -----------------------------------------------ccccccccccccChhhhcCCCCCCCcccccccc
Confidence 011246899999999999999999999999999
Q ss_pred hhhhccc---cCCCCchHHHHHHHhhcC-CCCc-------------------------------cc--------cccCch
Q 004998 300 LLFELFC---PFSTGEEKTRTMSSLRHR-VLPP-------------------------------QL--------LLKFPK 336 (720)
Q Consensus 300 ll~eLlt---pf~~~~~~~~~~~~l~~~-~~p~-------------------------------~~--------~~~~p~ 336 (720)
++|||++ ||............+... ..++ .. ....+.
T Consensus 207 ~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 286 (355)
T d2b1pa1 207 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQ 286 (355)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHH
T ss_pred hHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHH
Confidence 9999999 666544332221111100 0000 00 001123
Q ss_pred HHHHHHHcCCCCCCCCCChHHHHcCcccCCCcc
Q 004998 337 EASFCLWLLHPEPSGRPKMGELLQSEFLNEPRD 369 (720)
Q Consensus 337 ~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~~~ 369 (720)
..+||.+||++||++||||+|+|+||||+...+
T Consensus 287 ~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~~~ 319 (355)
T d2b1pa1 287 ARDLLSKMLVIDPAKRISVDDALQHPYINVWYD 319 (355)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHHTSTTTGGGCC
T ss_pred HHHHHHHHCcCChhHCcCHHHHhcCcccCCCCC
Confidence 458999999999999999999999999998644
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-36 Score=319.07 Aligned_cols=205 Identities=20% Similarity=0.232 Sum_probs=155.0
Q ss_pred ehhhhccc-CCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC---------------CCCCCHHHHHHHHH
Q 004998 66 SDGVELTH-GDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP---------------KRSVDVYECLHIFR 128 (720)
Q Consensus 66 ~e~~~Ls~-l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~---------------~~~l~~~~~~~i~~ 128 (720)
+|..++.+ .+|||||.+++.++..+. .++++||| .+|+|.++|... ...+++.+++.|+.
T Consensus 65 ~e~~~l~~~~~h~~iv~~~~~~~~~~~---~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 141 (299)
T d1ywna1 65 SELKILIHIGHHLNVVNLLGACTKPGG---PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSF 141 (299)
T ss_dssp HHHHHHHHHCCCTTBCCEEEEECSTTS---CCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHH
T ss_pred HHHHHHHhhcCCCeEEEeeeeeccCCC---eEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHH
Confidence 45555655 478999999994444332 46999999 999999999432 23489999999999
Q ss_pred HHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccc
Q 004998 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
||+.||.|||++|||||||||+||||+.++++||+|||+++......
T Consensus 142 qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~--------------------------------- 188 (299)
T d1ywna1 142 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP--------------------------------- 188 (299)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECC------CCSCT---------------------------------
T ss_pred HHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEccCcchhhccccc---------------------------------
Confidence 99999999999999999999999999999999999888875432110
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC
Q 004998 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 288 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 288 (720)
+. .......||+.|+|||++.+..+
T Consensus 189 ~~-------------------------------------------------------~~~~~~~gt~~y~APE~l~~~~~ 213 (299)
T d1ywna1 189 DY-------------------------------------------------------VRKGDARLPLKWMAPETIFDRVY 213 (299)
T ss_dssp TS-------------------------------------------------------CCTTSCCCGGGGCCHHHHHHCCC
T ss_pred cc-------------------------------------------------------cccCceeeCccccchhHhhcCCC
Confidence 00 00012478999999999999999
Q ss_pred Cccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 289 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 289 s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
+.++|||||||++|||++ ||............+..+..++......+...+||.+||+.||.+|||+.||++|
T Consensus 214 ~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~ 290 (299)
T d1ywna1 214 TIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 290 (299)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 999999999999999997 5666555545556666655544433344555699999999999999999999975
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-36 Score=320.07 Aligned_cols=210 Identities=15% Similarity=0.108 Sum_probs=162.5
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQG 141 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~g 141 (720)
+..+|..+|++++|||||++++.++..+. .+++|||| .+++|.+++......+++..++.++.||+.||.|||+.|
T Consensus 74 ~~~~E~~~l~~l~HpnIv~~~g~~~~~~~---~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~ 150 (311)
T d1r0pa_ 74 QFLTEGIIMKDFSHPNVLSLLGICLRSEG---SPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK 150 (311)
T ss_dssp HHHHHHHHHHTCCCTTBCCCCEEEEETTT---EEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCCEeEEeEEEEecCC---ceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccC
Confidence 44578889999999999999994444332 57999999 999999999777777899999999999999999999999
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|+||||||+||||+.++.+||+|||+++........
T Consensus 151 iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~-------------------------------------------- 186 (311)
T d1r0pa_ 151 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD-------------------------------------------- 186 (311)
T ss_dssp CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCC--------------------------------------------
T ss_pred cccCCccHHhEeECCCCCEEEecccchhhccccccc--------------------------------------------
Confidence 999999999999999999999999888543211000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
.........||+.|+|||.+.+..++.++|||||||++
T Consensus 187 ------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl 224 (311)
T d1r0pa_ 187 ------------------------------------------SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLL 224 (311)
T ss_dssp ------------------------------------------CTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred ------------------------------------------cceecccccccccccChHHHhcCCCCChhHhhhhHHHH
Confidence 00000114689999999999988899999999999999
Q ss_pred hhccc---cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHcC
Q 004998 302 FELFC---PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQS 361 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~h 361 (720)
|||++ ||............+..+..++......+...+|+.+||+.||++||++.||++|
T Consensus 225 ~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 287 (311)
T d1r0pa_ 225 WELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287 (311)
T ss_dssp HHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 99998 6655444434444455444443322233455699999999999999999999975
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=1.7e-36 Score=323.06 Aligned_cols=208 Identities=14% Similarity=0.215 Sum_probs=155.8
Q ss_pred eeeehhhhcccCC-CCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGD-HLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~-HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|+.+|.++. ||||+++++ ++..... ..+++|||| .+++|..+. +.+++.+++.+++||+.||+|||++
T Consensus 75 ~~~~Ei~il~~l~~hpnIv~~~~-~~~~~~~-~~~~~v~e~~~~~~L~~~~----~~l~e~~i~~i~~qil~aL~~LH~~ 148 (328)
T d3bqca1 75 KIKREIKILENLRGGPNIITLAD-IVKDPVS-RTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEILKALDYCHSM 148 (328)
T ss_dssp HHHHHHHHHHHHTTSTTBCCEEE-EEECTTT-CSEEEEEECCCSCBGGGTT----TSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccCCCCCcEEEE-EEEecCC-CceeEEEeecCCCcHHHHh----cCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 3447888999985 999999999 5544332 368999999 888887654 3499999999999999999999999
Q ss_pred CceeccCCCCcEEEccCC-ceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~-~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|||||||||+|||++.++ .+||+|||++.......
T Consensus 149 gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~-------------------------------------------- 184 (328)
T d3bqca1 149 GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ-------------------------------------------- 184 (328)
T ss_dssp TEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC--------------------------------------------
T ss_pred ccccccccccceEEcCCCCeeeecccccceeccCCC--------------------------------------------
Confidence 999999999999998655 68999888874321110
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-CCccccchhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP-VSCASDIYRLG 298 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~s~~sDIwSLG 298 (720)
.....+||+.|+|||.+.+.. ++.++||||||
T Consensus 185 -----------------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG 217 (328)
T d3bqca1 185 -----------------------------------------------EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLG 217 (328)
T ss_dssp -----------------------------------------------CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHH
T ss_pred -----------------------------------------------cccccccCccccCcccccCCCCCCcccchhhhh
Confidence 001146899999999988765 79999999999
Q ss_pred hhhhhccc---cCCCCchHHHHHHHhhc---------------CCC--------------------Cccc-cccCchHHH
Q 004998 299 VLLFELFC---PFSTGEEKTRTMSSLRH---------------RVL--------------------PPQL-LLKFPKEAS 339 (720)
Q Consensus 299 vll~eLlt---pf~~~~~~~~~~~~l~~---------------~~~--------------------p~~~-~~~~p~~~~ 339 (720)
|++|||++ ||............+.. ... +... ....++..+
T Consensus 218 ~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~d 297 (328)
T d3bqca1 218 CMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALD 297 (328)
T ss_dssp HHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHH
T ss_pred hhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHH
Confidence 99999998 67654322211111100 000 0001 112244569
Q ss_pred HHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 340 FCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 340 li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
||.+||++||.+|||++|+|+||||+..
T Consensus 298 li~~mL~~dP~~R~ta~e~L~Hp~F~~v 325 (328)
T d3bqca1 298 FLDKLLRYDHQSRLTAREAMEHPYFYTV 325 (328)
T ss_dssp HHHHHSCSSGGGSCCHHHHHTSGGGTTS
T ss_pred HHHHHccCChhHCcCHHHHhcCcccCCC
Confidence 9999999999999999999999999875
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-36 Score=319.83 Aligned_cols=210 Identities=19% Similarity=0.228 Sum_probs=161.3
Q ss_pred eeeehhhhcccCCC-CCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHc
Q 004998 63 RKHSDGVELTHGDH-LRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQ 140 (720)
Q Consensus 63 r~~~e~~~Ls~l~H-pnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~ 140 (720)
+..+|+.+|++++| |||+++++ ++++.. .++++||| .|++|.+++...+ .+++..++.++.||+.||.|||++
T Consensus 74 ~~~~E~~il~~l~h~pnIv~~~~-~~~~~~---~~~~v~e~~~~~~L~~~i~~~~-~~~e~~~~~~~~Qi~~al~~lH~~ 148 (322)
T d1vzoa_ 74 HTRTERQVLEHIRQSPFLVTLHY-AFQTET---KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLHKL 148 (322)
T ss_dssp GCCCHHHHHHHHHTCTTBCCEEE-EEEETT---EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhccCCCeEEEeee-eeccCC---ceeeeeecccccHHHHHHHhcc-cccHHHHHHHHHHHHHHHHHhhcC
Confidence 34478889999977 89999999 565554 57999999 9999999995544 489999999999999999999999
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCC
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDL 220 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~ 220 (720)
|||||||||+|||++.++.+||+|||++..+......
T Consensus 149 ~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~------------------------------------------- 185 (322)
T d1vzoa_ 149 GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETE------------------------------------------- 185 (322)
T ss_dssp TCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGG-------------------------------------------
T ss_pred CEEeccCCccceeecCCCCEEEeeccchhhhcccccc-------------------------------------------
Confidence 9999999999999999999999999887432111000
Q ss_pred cccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC--CCccccchhhh
Q 004998 221 SEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP--VSCASDIYRLG 298 (720)
Q Consensus 221 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~s~~sDIwSLG 298 (720)
......||+.|+|||++.+.. ++.++||||||
T Consensus 186 ----------------------------------------------~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG 219 (322)
T d1vzoa_ 186 ----------------------------------------------RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLG 219 (322)
T ss_dssp ----------------------------------------------GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHH
T ss_pred ----------------------------------------------cccccccccccchhHHhhcCCcCCCchhhhHHHH
Confidence 001146899999999997654 68899999999
Q ss_pred hhhhhccc---cCCCCch---HHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCC-----ChHHHHcCcccCCC
Q 004998 299 VLLFELFC---PFSTGEE---KTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRP-----KMGELLQSEFLNEP 367 (720)
Q Consensus 299 vll~eLlt---pf~~~~~---~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rp-----ta~eiL~hp~~~~~ 367 (720)
|+||||++ ||..... ........... .++......+...+||.+||++||.+|| |++|+|+||||++.
T Consensus 220 ~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~-~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i 298 (322)
T d1vzoa_ 220 VLMYELLTGASPFTVDGEKNSQAEISRRILKS-EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI 298 (322)
T ss_dssp HHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHC-CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHhcccC-CCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCC
Confidence 99999999 7765422 22222222111 2222223344556999999999999999 58999999999875
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.8e-36 Score=314.95 Aligned_cols=202 Identities=16% Similarity=0.170 Sum_probs=160.1
Q ss_pred ehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC---------------CCCCHHHHHHHHH
Q 004998 66 SDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK---------------RSVDVYECLHIFR 128 (720)
Q Consensus 66 ~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~---------------~~l~~~~~~~i~~ 128 (720)
+|...+.++ +|||||++++ ++.++. .+|+|||| .+|+|.++|.... ..+++.+++.++.
T Consensus 67 ~e~~~l~~~~~HpnIv~~~~-~~~~~~---~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 142 (299)
T d1fgka_ 67 SEMEMMKMIGKHKNIINLLG-ACTQDG---PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAY 142 (299)
T ss_dssp HHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHH
T ss_pred HHHHHHHHhcCCCeEEeccc-ccccCC---eEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHH
Confidence 666777776 8999999999 555543 57999999 9999999995432 3489999999999
Q ss_pred HHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccc
Q 004998 129 QIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRRE 208 (720)
Q Consensus 129 QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~ 208 (720)
||+.||.|||++|||||||||+|||++.++.+||+|||++.........
T Consensus 143 qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~------------------------------- 191 (299)
T d1fgka_ 143 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY------------------------------- 191 (299)
T ss_dssp HHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTT-------------------------------
T ss_pred HHHHHHHHhhhCCEEeeeecccceeecCCCCeEeccchhhccccccccc-------------------------------
Confidence 9999999999999999999999999999999999999887442111000
Q ss_pred ccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCC
Q 004998 209 DLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPV 288 (720)
Q Consensus 209 Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 288 (720)
.......||+.|+|||.+.+..|
T Consensus 192 ---------------------------------------------------------~~~~~~~~~~~y~aPE~l~~~~y 214 (299)
T d1fgka_ 192 ---------------------------------------------------------KKTTNGRLPVKWMAPEALFDRIY 214 (299)
T ss_dssp ---------------------------------------------------------CCCTTSCCGGGGSCHHHHHHCCC
T ss_pred ---------------------------------------------------------cccccCCCChhhhhhhHhcCCCC
Confidence 00011468999999999999999
Q ss_pred Cccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 289 SCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 289 s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
+.++|||||||++|||++ ||.... .......+..+..++......+...+||.+||++||++|||+.||++
T Consensus 215 ~~k~DiwS~Gvvl~ell~~g~~p~~~~~-~~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~ 289 (299)
T d1fgka_ 215 THQSDVWSFGVLLWEIFTLGGSPYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289 (299)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCSSTTCC-HHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CchhhhHHhHHHHHHhccCCCCCCCCCC-HHHHHHHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence 999999999999999997 454433 33555666665444443333445569999999999999999999986
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-35 Score=311.87 Aligned_cols=211 Identities=11% Similarity=0.101 Sum_probs=155.6
Q ss_pred eeeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH-
Q 004998 62 LRKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHS- 139 (720)
Q Consensus 62 ~r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs- 139 (720)
+..++|...+.+++|||||++++.+.........+|+|||| .+++|.++|++. .+++..++.++.|++.||.|||+
T Consensus 42 ~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~--~l~~~~~~~~~~~ia~gl~~lH~~ 119 (303)
T d1vjya_ 42 WFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHME 119 (303)
T ss_dssp HHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHh
Confidence 34456777888899999999999655555555578999999 899999999654 38999999999999999999996
Q ss_pred -------cCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccc
Q 004998 140 -------QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 140 -------~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
+|||||||||+||||+.++++||+|||+++........
T Consensus 120 ~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~----------------------------------- 164 (303)
T d1vjya_ 120 IVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT----------------------------------- 164 (303)
T ss_dssp BCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE-----------------------------------
T ss_pred hhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCcc-----------------------------------
Confidence 59999999999999999999999999887432111000
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCC-----
Q 004998 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAP----- 287 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----- 287 (720)
........+||+.|+|||++.+..
T Consensus 165 ---------------------------------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~ 193 (303)
T d1vjya_ 165 ---------------------------------------------------IDIAPNHRVGTKRYMAPEVLDDSINMKHF 193 (303)
T ss_dssp ---------------------------------------------------ECC----CCSCGGGCCHHHHTTCSCTTCH
T ss_pred ---------------------------------------------------eeccccceecccCcCChhhccccccccCC
Confidence 000011257999999999987653
Q ss_pred -CCccccchhhhhhhhhccc---cCCC--------------CchHHHHHHHhhcCCCCccccccCc------hHHHHHHH
Q 004998 288 -VSCASDIYRLGVLLFELFC---PFST--------------GEEKTRTMSSLRHRVLPPQLLLKFP------KEASFCLW 343 (720)
Q Consensus 288 -~s~~sDIwSLGvll~eLlt---pf~~--------------~~~~~~~~~~l~~~~~p~~~~~~~p------~~~~li~~ 343 (720)
++.++|||||||+||||+| ||.. ..........+....+.|.++..+. ...+|+.+
T Consensus 194 ~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~ 273 (303)
T d1vjya_ 194 ESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRE 273 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHT
T ss_pred CcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHH
Confidence 6789999999999999998 2211 0111222223333333333322221 24589999
Q ss_pred cCCCCCCCCCChHHHHc
Q 004998 344 LLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 344 ~L~~dP~~Rpta~eiL~ 360 (720)
||+.||++|||+.||++
T Consensus 274 cl~~dp~~Rps~~ei~~ 290 (303)
T d1vjya_ 274 CWYANGAARLTALRIKK 290 (303)
T ss_dssp TCCSSGGGSCCHHHHHH
T ss_pred HcccCHhHCcCHHHHHH
Confidence 99999999999999986
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.4e-35 Score=308.44 Aligned_cols=205 Identities=15% Similarity=0.121 Sum_probs=162.0
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCC-----------------------CCCC
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKP-----------------------KRSV 118 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~-----------------------~~~l 118 (720)
+..+|..+|++++||||+++++ ++.... .++++||| .+++|.++|... ...+
T Consensus 62 ~~~~E~~il~~l~h~niv~~~~-~~~~~~---~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 137 (301)
T d1lufa_ 62 DFQREAALMAEFDNPNIVKLLG-VCAVGK---PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPL 137 (301)
T ss_dssp HHHHHHHHHHTCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHTCC----------------------CCC
T ss_pred HHHHHHHHHHhcCCCCccccee-eeccCC---ceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCC
Confidence 3457888999999999999999 555443 57999999 899999999432 1248
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhh
Q 004998 119 DVYECLHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDM 198 (720)
Q Consensus 119 ~~~~~~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (720)
++.+++.|+.||+.||.|||++|||||||||+|||++.++.+||+|||+++......
T Consensus 138 ~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~----------------------- 194 (301)
T d1lufa_ 138 SCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSAD----------------------- 194 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGG-----------------------
T ss_pred CHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCCCcEEEccchhheeccCCc-----------------------
Confidence 899999999999999999999999999999999999999999999888873211000
Q ss_pred HhhhhcccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCccc
Q 004998 199 LQRRTRLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYA 278 (720)
Q Consensus 199 ~~~r~~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 278 (720)
.. .......||+.|+
T Consensus 195 ----------~~-------------------------------------------------------~~~~~~~~~~~y~ 209 (301)
T d1lufa_ 195 ----------YY-------------------------------------------------------KADGNDAIPIRWM 209 (301)
T ss_dssp ----------CB-------------------------------------------------------C----CCBCGGGC
T ss_pred ----------cc-------------------------------------------------------cccCCCCcCcCcC
Confidence 00 0001146789999
Q ss_pred CCccccCCCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCC
Q 004998 279 SPEELAGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPK 354 (720)
Q Consensus 279 APE~l~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpt 354 (720)
|||.+.+..|+.++|||||||++|||++ ||..... ......+..+..++......+...+||.+||+.||++|||
T Consensus 210 aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~-~e~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt 288 (301)
T d1lufa_ 210 PPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH-EEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPS 288 (301)
T ss_dssp CHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred CHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCCH-HHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcC
Confidence 9999999999999999999999999998 4554443 4556667766655544344455669999999999999999
Q ss_pred hHHHHc
Q 004998 355 MGELLQ 360 (720)
Q Consensus 355 a~eiL~ 360 (720)
+.||++
T Consensus 289 ~~ev~~ 294 (301)
T d1lufa_ 289 FCSIHR 294 (301)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999975
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-35 Score=311.31 Aligned_cols=205 Identities=15% Similarity=0.189 Sum_probs=159.6
Q ss_pred eeeehhhhcccC-CCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCC-----------------CCCCHHHH
Q 004998 63 RKHSDGVELTHG-DHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPK-----------------RSVDVYEC 123 (720)
Q Consensus 63 r~~~e~~~Ls~l-~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~-----------------~~l~~~~~ 123 (720)
+..+|..+++++ +|||||++++ ++.+.. .+|++||| .+++|.++|.... ..+++..+
T Consensus 72 ~~~~E~~~~~~l~~HpnIv~~~g-~~~~~~---~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 147 (311)
T d1t46a_ 72 ALMSELKVLSYLGNHMNIVNLLG-ACTIGG---PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL 147 (311)
T ss_dssp HHHHHHHHHHHHCCCTTBCCEEE-EECSSS---SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHH
T ss_pred HHHHHHHHHHhccCCCCEEEEEE-EEeeCC---EEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHH
Confidence 334677788887 6999999999 555543 57999999 8999999994322 25899999
Q ss_pred HHHHHHHHHHHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhh
Q 004998 124 LHIFRQIVEIVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRT 203 (720)
Q Consensus 124 ~~i~~QIl~aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 203 (720)
+.|+.||+.||.|||++|||||||||+|||++.++.++++|||.++......
T Consensus 148 ~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~---------------------------- 199 (311)
T d1t46a_ 148 LSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS---------------------------- 199 (311)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCT----------------------------
T ss_pred HHHHHHHHHHHHHHHhCCeeecccccccccccccCcccccccchheeccCCC----------------------------
Confidence 9999999999999999999999999999999999999999988875432110
Q ss_pred cccccccccccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccc
Q 004998 204 RLRREDLQLVTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEEL 283 (720)
Q Consensus 204 ~~~l~Dfgla~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 283 (720)
.+ .......||+.|+|||++
T Consensus 200 -----~~-------------------------------------------------------~~~~~~~gt~~y~aPE~~ 219 (311)
T d1t46a_ 200 -----NY-------------------------------------------------------VVKGNARLPVKWMAPESI 219 (311)
T ss_dssp -----TS-------------------------------------------------------EECSSSEECGGGCCHHHH
T ss_pred -----cc-------------------------------------------------------eEeeecccChHHcCHHHh
Confidence 00 000114789999999999
Q ss_pred cCCCCCccccchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCc-hHHHHHHHcCCCCCCCCCChHHH
Q 004998 284 AGAPVSCASDIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFP-KEASFCLWLLHPEPSGRPKMGEL 358 (720)
Q Consensus 284 ~~~~~s~~sDIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p-~~~~li~~~L~~dP~~Rpta~ei 358 (720)
.+..++.++|||||||++|||+| ||............+..+..+. .+..+| ...+||.+||++||.+|||+.+|
T Consensus 220 ~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~l~~Li~~cl~~dP~~RPs~~~i 298 (311)
T d1t46a_ 220 FNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML-SPEHAPAEMYDIMKTCWDADPLKRPTFKQI 298 (311)
T ss_dssp HHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCC-CCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCC-CcccccHHHHHHHHHHcCCChhHCcCHHHH
Confidence 98889999999999999999998 3444444334444444443333 333444 44599999999999999999999
Q ss_pred Hc
Q 004998 359 LQ 360 (720)
Q Consensus 359 L~ 360 (720)
++
T Consensus 299 l~ 300 (311)
T d1t46a_ 299 VQ 300 (311)
T ss_dssp HH
T ss_pred HH
Confidence 86
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.2e-35 Score=307.80 Aligned_cols=205 Identities=13% Similarity=0.088 Sum_probs=161.1
Q ss_pred eeeehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhC---------CCCCCCHHHHHHHHHHHHH
Q 004998 63 RKHSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDK---------PKRSVDVYECLHIFRQIVE 132 (720)
Q Consensus 63 r~~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~---------~~~~l~~~~~~~i~~QIl~ 132 (720)
+..+|..++++++|||||++++ ++..+. .+++|||| .+|+|.+++.. ....+++..+..|+.||+.
T Consensus 69 ~~~~E~~il~~l~h~nIv~~~~-~~~~~~---~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~ 144 (308)
T d1p4oa_ 69 EFLNEASVMKEFNCHHVVRLLG-VVSQGQ---PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD 144 (308)
T ss_dssp HHHHHHHHGGGCCCTTBCCEEE-EECSSS---SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEeeeee-EEecCC---ceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHH
Confidence 3447888999999999999999 554443 56999999 99999999832 1234789999999999999
Q ss_pred HHHHHHHcCceeccCCCCcEEEccCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhccccccccc
Q 004998 133 IVYAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQL 212 (720)
Q Consensus 133 aL~yLHs~gIvHrDLKP~NILl~~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgl 212 (720)
||.|||+++|+||||||+|||++.++++||+|||+++.......
T Consensus 145 gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~------------------------------------ 188 (308)
T d1p4oa_ 145 GMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY------------------------------------ 188 (308)
T ss_dssp HHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGC------------------------------------
T ss_pred HHHHHhhCCeeeceEcCCceeecCCceEEEeecccceeccCCcc------------------------------------
Confidence 99999999999999999999999999999998888743211000
Q ss_pred ccCCCCCCcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccc
Q 004998 213 VTAPTNDLSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCAS 292 (720)
Q Consensus 213 a~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~s 292 (720)
........||+.|+|||.+.+..++.++
T Consensus 189 ----------------------------------------------------~~~~~~~~~t~~y~aPe~l~~~~~~~~~ 216 (308)
T d1p4oa_ 189 ----------------------------------------------------YRKGGKGLLPVRWMSPESLKDGVFTTYS 216 (308)
T ss_dssp ----------------------------------------------------EEGGGSSEECGGGCCHHHHHHCCCCHHH
T ss_pred ----------------------------------------------------eeeccceecccccCCHHHHccCCCCccc
Confidence 0001124689999999999999999999
Q ss_pred cchhhhhhhhhccc----cCCCCchHHHHHHHhhcCCCCccccccCchHHHHHHHcCCCCCCCCCChHHHHc
Q 004998 293 DIYRLGVLLFELFC----PFSTGEEKTRTMSSLRHRVLPPQLLLKFPKEASFCLWLLHPEPSGRPKMGELLQ 360 (720)
Q Consensus 293 DIwSLGvll~eLlt----pf~~~~~~~~~~~~l~~~~~p~~~~~~~p~~~~li~~~L~~dP~~Rpta~eiL~ 360 (720)
|||||||++|||++ ||..... ......+..+..++......+...+||.+||+.||.+|||+.+|++
T Consensus 217 Dv~S~G~il~El~t~~~~p~~~~~~-~~~~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~ 287 (308)
T d1p4oa_ 217 DVWSFGVVLWEIATLAEQPYQGLSN-EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 287 (308)
T ss_dssp HHHHHHHHHHHHHHTSCCTTTTSCH-HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ccccHHHHHHHHHhCCCCCCCCCCH-HHHHHHHHhCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99999999999998 4544433 3455555555544433333345669999999999999999999997
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.98 E-value=4.3e-33 Score=292.70 Aligned_cols=214 Identities=17% Similarity=0.145 Sum_probs=155.0
Q ss_pred eehhhhcccCCCCCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 65 HSDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 65 ~~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.+|..+++.++|+|+|.++..+..... .+++||||.+++|.+.+......+++..+..++.||+.||+|||++||||
T Consensus 50 ~~E~~i~~~l~~~~~i~~~~~~~~~~~---~~~ivme~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH 126 (299)
T d1ckia_ 50 HIESKIYKMMQGGVGIPTIRWCGAEGD---YNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIH 126 (299)
T ss_dssp HHHHHHHHHSTTSTTCCCEEEEEEETT---EEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHHccCCCcccEEEEEEecCC---EEEEEEEEcCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCCeee
Confidence 467778999999888777763444443 67999999888998888666667999999999999999999999999999
Q ss_pred ccCCCCcEEEc---cCCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCc
Q 004998 145 HNVRPSCFVMS---SFNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLS 221 (720)
Q Consensus 145 rDLKP~NILl~---~~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~ 221 (720)
|||||+|||++ .+..++++|||+++..........
T Consensus 127 rDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~------------------------------------------ 164 (299)
T d1ckia_ 127 RDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH------------------------------------------ 164 (299)
T ss_dssp SCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCB------------------------------------------
T ss_pred ccCCHhhccccccCCCceeeeeccCcceeccccccccc------------------------------------------
Confidence 99999999986 345699999998854322100000
Q ss_pred ccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhh
Q 004998 222 EASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLL 301 (720)
Q Consensus 222 ~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll 301 (720)
..........||+.|+|||++.+..++.++|||||||++
T Consensus 165 -----------------------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l 203 (299)
T d1ckia_ 165 -----------------------------------------IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVL 203 (299)
T ss_dssp -----------------------------------------CCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHH
T ss_pred -----------------------------------------eeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHH
Confidence 000001125799999999999999999999999999999
Q ss_pred hhccc---cCCCCchHHHHHH--Hhhc---CCCCccccccCchH-HHHHHHcCCCCCCCCCChHHH---HcCccc
Q 004998 302 FELFC---PFSTGEEKTRTMS--SLRH---RVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGEL---LQSEFL 364 (720)
Q Consensus 302 ~eLlt---pf~~~~~~~~~~~--~l~~---~~~p~~~~~~~p~~-~~li~~~L~~dP~~Rpta~ei---L~hp~~ 364 (720)
|||++ ||........... .... ...++.+...+|++ .+|+..||..+|.+||++.++ |+|+|.
T Consensus 204 ~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~ 278 (299)
T d1ckia_ 204 MYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 278 (299)
T ss_dssp HHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence 99999 7765432211111 1111 12223334455554 599999999999999998755 455543
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=99.97 E-value=1.5e-31 Score=280.08 Aligned_cols=207 Identities=15% Similarity=0.127 Sum_probs=151.6
Q ss_pred ehhhhcccCCC-CCceecccceeecCCCCCcEEEEEecCCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDH-LRNQGGLSGVCENEAAIDPFVHAIEWGDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~H-pnIV~l~~~~~~~~~~~~~~~lv~E~~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
+|..++..+.| +||+.+++ ++..+. ..|+||||.|++|.+++...+..+++.++..++.|++.||.|||++||||
T Consensus 49 ~e~~~~~~l~~~~~i~~~~~-~~~~~~---~~~~vme~~~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiH 124 (293)
T d1csna_ 49 DEYRTYKLLAGCTGIPNVYY-FGQEGL---HNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVY 124 (293)
T ss_dssp HHHHHHHHTTTCTTCCCEEE-EEEETT---EEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred HHHHHHHHhcCCCCCCEEEE-EeecCC---ccEEEEEecCCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCcee
Confidence 34456666655 89999888 444432 67999999999999999776667999999999999999999999999999
Q ss_pred ccCCCCcEEEcc-----CCceEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCC
Q 004998 145 HNVRPSCFVMSS-----FNHVSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTND 219 (720)
Q Consensus 145 rDLKP~NILl~~-----~~~vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~ 219 (720)
|||||+|||++. .+.+||+|||+++..........
T Consensus 125 rDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~---------------------------------------- 164 (293)
T d1csna_ 125 RDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH---------------------------------------- 164 (293)
T ss_dssp CCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCB----------------------------------------
T ss_pred ccCCccceeecCcccccCCceEEcccceeEEcccCccccc----------------------------------------
Confidence 999999999974 57899999998854322100000
Q ss_pred CcccccccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhh
Q 004998 220 LSEASCMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGV 299 (720)
Q Consensus 220 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGv 299 (720)
.........+||+.|||||++.+..++.++|||||||
T Consensus 165 -------------------------------------------~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~ 201 (293)
T d1csna_ 165 -------------------------------------------IPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGH 201 (293)
T ss_dssp -------------------------------------------CCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHH
T ss_pred -------------------------------------------eeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhH
Confidence 0000011257999999999999999999999999999
Q ss_pred hhhhccc---cCCCCch--HHHHHHHhh---cCCCCccccccCchH-HHHHHHcCCCCCCCCCChHHHH
Q 004998 300 LLFELFC---PFSTGEE--KTRTMSSLR---HRVLPPQLLLKFPKE-ASFCLWLLHPEPSGRPKMGELL 359 (720)
Q Consensus 300 ll~eLlt---pf~~~~~--~~~~~~~l~---~~~~p~~~~~~~p~~-~~li~~~L~~dP~~Rpta~eiL 359 (720)
++|||++ ||..... .......+. ....++.+...+|++ .+|+..|+..+|++||+...+.
T Consensus 202 ~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~ 270 (293)
T d1csna_ 202 VFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ 270 (293)
T ss_dssp HHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred HHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHH
Confidence 9999999 6654321 112222221 122223333445544 5999999999999999876654
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.96 E-value=1.6e-30 Score=279.88 Aligned_cols=198 Identities=19% Similarity=0.258 Sum_probs=135.8
Q ss_pred CCCCceecccceeecCCCCCcEEEEEec--CCCCHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHHHHH-cCceeccCCCC
Q 004998 75 DHLRNQGGLSGVCENEAAIDPFVHAIEW--GDVSLRQWL-DKPKRSVDVYECLHIFRQIVEIVYAAHS-QGIVVHNVRPS 150 (720)
Q Consensus 75 ~HpnIV~l~~~~~~~~~~~~~~~lv~E~--~ggsL~~~L-~~~~~~l~~~~~~~i~~QIl~aL~yLHs-~gIvHrDLKP~ 150 (720)
.|||||++++.+...... ..+++|++ .+++..... ......+++..++.++.||+.||+|||+ +||+||||||+
T Consensus 78 ~~~~iv~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~ 155 (362)
T d1q8ya_ 78 GANHILKLLDHFNHKGPN--GVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPE 155 (362)
T ss_dssp HHTTBCCCCEEEEEEETT--EEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGG
T ss_pred CcCceEEEEEEeeecccc--ceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChh
Confidence 468899999944333332 33444444 444444444 4445568999999999999999999998 89999999999
Q ss_pred cEEEccCCc------eEEeccCcccCCCCCCcccccccccccccCCCCCCchhhHhhhhcccccccccccCCCCCCcccc
Q 004998 151 CFVMSSFNH------VSFIESASCSDSGSDSHEEGLNTQNMETKDLSSPLPLDMLQRRTRLRREDLQLVTAPTNDLSEAS 224 (720)
Q Consensus 151 NILl~~~~~------vkliDfg~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~Dfgla~~~~~~~~~~~ 224 (720)
||||+.++. ++++|||.+......
T Consensus 156 NIll~~~~~~~~~~~~kl~dfg~s~~~~~~-------------------------------------------------- 185 (362)
T d1q8ya_ 156 NVLMEIVDSPENLIQIKIADLGNACWYDEH-------------------------------------------------- 185 (362)
T ss_dssp GEEEEEEETTTTEEEEEECCCTTCEETTBC--------------------------------------------------
T ss_pred HeeeeccCcccccceeeEeecccccccccc--------------------------------------------------
Confidence 999986553 777777665211000
Q ss_pred cccCCCccccccccccccccccccccccchhhhhcccCCCCccccccccCCcccCCccccCCCCCccccchhhhhhhhhc
Q 004998 225 CMQSSSAYGTHVVLVEGMQEHKILDNRVNVEQVEEKKQPFPMKQILLMETNWYASPEELAGAPVSCASDIYRLGVLLFEL 304 (720)
Q Consensus 225 ~~q~~~~~~~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~s~~sDIwSLGvll~eL 304 (720)
....+||+.|+|||++.+..++.++|||||||++++|
T Consensus 186 -------------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 222 (362)
T d1q8ya_ 186 -------------------------------------------YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFEL 222 (362)
T ss_dssp -------------------------------------------CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHH
T ss_pred -------------------------------------------cccccccccccChhhccccCCCccccccchHHHHHHH
Confidence 0114789999999999999999999999999999999
Q ss_pred cc---cCCCCchH------HHHHHHhhc-CCCCcc--------------------------------------c-cccCc
Q 004998 305 FC---PFSTGEEK------TRTMSSLRH-RVLPPQ--------------------------------------L-LLKFP 335 (720)
Q Consensus 305 lt---pf~~~~~~------~~~~~~l~~-~~~p~~--------------------------------------~-~~~~p 335 (720)
++ ||.+.... ......+.. +..|.. + ....+
T Consensus 223 ~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (362)
T d1q8ya_ 223 ITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAK 302 (362)
T ss_dssp HHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHH
T ss_pred HHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCH
Confidence 99 55443211 001100000 000000 0 01123
Q ss_pred hHHHHHHHcCCCCCCCCCChHHHHcCcccCCC
Q 004998 336 KEASFCLWLLHPEPSGRPKMGELLQSEFLNEP 367 (720)
Q Consensus 336 ~~~~li~~~L~~dP~~Rpta~eiL~hp~~~~~ 367 (720)
...+||.+||++||.+||||+|+|+||||++.
T Consensus 303 ~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~ 334 (362)
T d1q8ya_ 303 EISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 334 (362)
T ss_dssp HHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred HHHHHHHHHCCCChhHCcCHHHHhcCcccCCC
Confidence 34599999999999999999999999999965
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.62 E-value=7.5e-16 Score=165.15 Aligned_cols=139 Identities=20% Similarity=0.232 Sum_probs=106.7
Q ss_pred hhhhhhhccccceEEeeeec-cCCCCCCCCCeEEEEECCCCCEEEEeeCCCc---EEEeeCCcccccc-----cccccce
Q 004998 580 LEGLCKYLSFSKLRVKADLN-QGDLLNSSNLVCSLSFDRDGELFAAAGVNKK---IKVFECDAIINEN-----RDIHYPV 650 (720)
Q Consensus 580 ~~~l~~~~~~~~~~~~~~l~-~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~---i~iwd~~~~~~~~-----~~~~~~~ 650 (720)
.++..++|...+.+.+..++ ...+.+|...|++|+|+|||++||+||.|++ |+|||++++.... .....+.
T Consensus 203 ~Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~ 282 (393)
T d1sq9a_ 203 NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQAS 282 (393)
T ss_dssp TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC-------
T ss_pred CCCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccce
Confidence 34566788888888888888 6678899999999999999999999999985 9999998752110 0000011
Q ss_pred -EEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEEEE-----------EEeecCCceEEEecCccceEEc
Q 004998 651 -VEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSALY-----------CIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 651 -~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~v~-----------~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
....|.+.|++|+|+|+ +++|||||.|++|+|||+.+|+++.++. .++|++.+..++++....++.+
T Consensus 283 ~~~~gH~~~V~~l~fspd-~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (393)
T d1sq9a_ 283 LGEFAHSSWVMSLSFNDS-GETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFL 361 (393)
T ss_dssp -CCBSBSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEE
T ss_pred eeeecccCceeeeccCCC-CCeeEEECCCCEEEEEECCCCCEEEEECCcCCcccCCccEEEECCCCCEEEEcccceEEEC
Confidence 12246788999999996 5699999999999999999999998853 5789999988888877777765
Q ss_pred c
Q 004998 719 Q 719 (720)
Q Consensus 719 ~ 719 (720)
.
T Consensus 362 ~ 362 (393)
T d1sq9a_ 362 K 362 (393)
T ss_dssp C
T ss_pred c
Confidence 4
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.51 E-value=1.1e-15 Score=148.16 Aligned_cols=89 Identities=17% Similarity=0.094 Sum_probs=71.3
Q ss_pred ehhhhcccCCCCCceecccceeecCCCCCcEEEEEec-CCCCHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHcCcee
Q 004998 66 SDGVELTHGDHLRNQGGLSGVCENEAAIDPFVHAIEW-GDVSLRQWLDKPKRSVDVYECLHIFRQIVEIVYAAHSQGIVV 144 (720)
Q Consensus 66 ~e~~~Ls~l~HpnIV~l~~~~~~~~~~~~~~~lv~E~-~ggsL~~~L~~~~~~l~~~~~~~i~~QIl~aL~yLHs~gIvH 144 (720)
.|...|.++.|++++..++ + .. .+++||| .+..+.+ ++...+..++.||+.+|.|||++||+|
T Consensus 63 ~e~~~l~~l~~~~v~~~~~-~-~~------~~lvme~~~~~~~~~--------l~~~~~~~i~~ql~~~l~~lH~~giiH 126 (191)
T d1zara2 63 NEFRALQKLQGLAVPKVYA-W-EG------NAVLMELIDAKELYR--------VRVENPDEVLDMILEEVAKFYHRGIVH 126 (191)
T ss_dssp HHHHHHHHTTTSSSCCEEE-E-ET------TEEEEECCCCEEGGG--------CCCSCHHHHHHHHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHccCCCcceEEE-e-cC------CEEEEEeeccccccc--------hhhHHHHHHHHHHHHHHHHHhhCCEEE
Confidence 4667788899999998877 2 22 2799999 5544332 455567789999999999999999999
Q ss_pred ccCCCCcEEEccCCceEEeccCcccCC
Q 004998 145 HNVRPSCFVMSSFNHVSFIESASCSDS 171 (720)
Q Consensus 145 rDLKP~NILl~~~~~vkliDfg~a~~~ 171 (720)
|||||+|||+++ +.++|+|||.+...
T Consensus 127 rDiKP~NILv~~-~~~~liDFG~a~~~ 152 (191)
T d1zara2 127 GDLSQYNVLVSE-EGIWIIDFPQSVEV 152 (191)
T ss_dssp SCCSTTSEEEET-TEEEECCCTTCEET
T ss_pred ccCChhheeeeC-CCEEEEECCCcccC
Confidence 999999999985 45899999988544
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.49 E-value=1.3e-13 Score=141.39 Aligned_cols=123 Identities=10% Similarity=0.115 Sum_probs=100.4
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe---cCCC
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASRS 657 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~~ 657 (720)
++..+++...+.+++.++. +|.+.|++|+|+|+|++||+|+.|++|++||+.... ++... .+..
T Consensus 205 d~~v~i~d~~~~~~~~~~~-----~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~--------~~~~~~~~~~~~ 271 (340)
T d1tbga_ 205 DASAKLWDVREGMCRQTFT-----GHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ--------ELMTYSHDNIIC 271 (340)
T ss_dssp TTEEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------EEEEECCTTCCS
T ss_pred CceEEEEECCCCcEEEEEe-----CCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccc--------cccccccccccC
Confidence 3445556666666666664 458899999999999999999999999999987652 22222 2356
Q ss_pred CEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 658 KLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 658 ~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.|.+++|+|+ +.+|++|+.||+|+|||+.+++++.+ |+|++|+|.+.++++|+.|..-+
T Consensus 272 ~i~~~~~s~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~Dg~v~ 337 (340)
T d1tbga_ 272 GITSVSFSKS-GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLK 337 (340)
T ss_dssp CEEEEEECSS-SCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSCEE
T ss_pred ceEEEEECCC-CCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccCCEEE
Confidence 7999999995 56999999999999999999999887 89999999999999999986543
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.44 E-value=4.2e-13 Score=139.94 Aligned_cols=112 Identities=12% Similarity=0.095 Sum_probs=88.9
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceE---EecCCCCEEEEEEecC
Q 004998 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV---EMASRSKLSSICWNSY 667 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~i~~v~~~~~ 667 (720)
+.+.+.+|.| .+.|+||+|+|||++||||| |++|+|||+.+.... .++. ...|.+.|++|+|+|+
T Consensus 41 ~~~~~~~~~H------~~~V~~v~fs~~g~~latg~-dg~V~iWd~~~~~~~-----~~~~~~~~~~h~~~I~~v~~s~d 108 (337)
T d1gxra_ 41 HARQINTLNH------GEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK-----SPVSQLDCLNRDNYIRSCKLLPD 108 (337)
T ss_dssp EEEEEEEECC------SSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCC-----SCSEEEECSCTTSBEEEEEECTT
T ss_pred CceEEEECCC------CCcEEEEEECCCCCEEEEEE-CCEEEEEEccCCccc-----ceeEEeeecCCCCcEEEEEEcCC
Confidence 4566777755 88999999999999999998 899999998765221 1222 2345778999999996
Q ss_pred CCCEEEEEeCCCcEEEEECCCC--cEEEE-------EEEEeecCCceEEEecCccce
Q 004998 668 IKSQIASSNFEGVVQVGQVLHL--IYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 668 ~~~~laS~s~D~~v~lWDv~tg--~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+++||+|+.||+|+|||+... +...+ +.+++|++.+..+++++.|..
T Consensus 109 -g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~ 164 (337)
T d1gxra_ 109 -GCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGN 164 (337)
T ss_dssp -SSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSC
T ss_pred -CCEEEEeecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 579999999999999998754 34433 789999999999999887753
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.43 E-value=6.9e-13 Score=133.44 Aligned_cols=115 Identities=13% Similarity=0.053 Sum_probs=87.9
Q ss_pred CCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccc-cccc-cc------------------------------
Q 004998 602 DLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN-RDIH-YP------------------------------ 649 (720)
Q Consensus 602 ~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~-~~~~-~~------------------------------ 649 (720)
.|.||.+.|++|+|+|+|++|||||.|++|+|||+.+..... ...| .+
T Consensus 12 ~L~GH~~~I~~l~~sp~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (317)
T d1vyhc1 12 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGF 91 (317)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSS
T ss_pred EEcCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCCEEEEEeCCCCcEEEEeeeccccccccccccccccccccccc
Confidence 467789999999999999999999999999999987631000 0000 00
Q ss_pred --eE-EecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccceEE
Q 004998 650 --VV-EMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 650 --~~-~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.. ...+...+.++.|+|+ ++.|++++.|+++++||+++++.+.+ +.+++|++.+..+++|+.|...+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~v~ 168 (317)
T d1vyhc1 92 ECIRTMHGHDHNVSSVSIMPN-GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 168 (317)
T ss_dssp CEEECCCCCSSCEEEEEECSS-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred ccccccccccccceeeeccCC-CceEEeeccCcceeEeecccceeeeEEccCCCcceeeecccCCCEEEEEeCCCeEE
Confidence 00 1123455778888885 56899999999999999999998876 78999999999999998876443
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.43 E-value=3.3e-13 Score=144.12 Aligned_cols=110 Identities=10% Similarity=0.069 Sum_probs=87.7
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceE-EecCCCCEEEEEEecCCCCEEEEEeCCCc-
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVV-EMASRSKLSSICWNSYIKSQIASSNFEGV- 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~i~~v~~~~~~~~~laS~s~D~~- 680 (720)
...+...|.+++|+||| +||||+.|++|+|||+.+..... .. .+.. ...|...|.+|+|+|+ +.+||||+.|++
T Consensus 180 ~~~~~~~~~~v~~s~dg-~lasgs~Dg~i~iwd~~~~~~~~-~~-~~~~~l~~h~~~V~~l~~spd-g~~l~sgs~D~t~ 255 (393)
T d1sq9a_ 180 PMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLY-NF-ESQHSMINNSNSIRSVKFSPQ-GSLLAIAHDSNSF 255 (393)
T ss_dssp SSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEE-EE-ECCC---CCCCCEEEEEECSS-TTEEEEEEEETTE
T ss_pred ccCCCCcEEEEEECCCC-EEEEEeCCCcEEEEeeccccccc-cc-ccccccccccceEEEcccccc-cceeeeecCCCCc
Confidence 44557789999999998 99999999999999998752110 00 0111 2345788999999995 569999999985
Q ss_pred --EEEEECCCCcEEEE--------------------EEEEeecCCceEEEecCccceE
Q 004998 681 --VQVGQVLHLIYFSA--------------------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 --v~lWDv~tg~~~~~--------------------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+|||+.+|+++.+ |++++|+|.+.++++|+.|.--
T Consensus 256 ~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~V~~l~fspd~~~l~S~s~D~~v 313 (393)
T d1sq9a_ 256 GCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKL 313 (393)
T ss_dssp EEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred ceeeecccccceeeeeeccccccccceeeeecccCceeeeccCCCCCeeEEECCCCEE
Confidence 99999999988775 7999999999999999998644
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.42 E-value=4.7e-13 Score=140.86 Aligned_cols=109 Identities=15% Similarity=0.186 Sum_probs=85.0
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccc-cccc----------cceEEecCCCCEEEEEEecCCCCEEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN-RDIH----------YPVVEMASRSKLSSICWNSYIKSQIA 673 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~-~~~~----------~~~~~~~~~~~i~~v~~~~~~~~~la 673 (720)
+|++.|+||+|+|||++||||+ |++|+|||+.++.... ...+ .......+...|++|+|+|+ +++||
T Consensus 60 ~H~~~V~~l~fs~dg~~lasg~-d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~-~~~l~ 137 (388)
T d1erja_ 60 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD-GKFLA 137 (388)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTT-SSEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEe-CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCC-CCcce
Confidence 4699999999999999999987 9999999987641100 0000 00112234667999999996 56999
Q ss_pred EEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 674 SSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 674 S~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
||+.||+|++||..+++.+.. |++++|++.+..+..|+.+..
T Consensus 138 s~~~dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~ 186 (388)
T d1erja_ 138 TGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT 186 (388)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eccccccccccccccccccccccccccccccccccccccccccccccee
Confidence 999999999999999998876 899999999999998877654
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.40 E-value=1.3e-12 Score=136.15 Aligned_cols=118 Identities=9% Similarity=-0.010 Sum_probs=98.2
Q ss_pred hhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEE
Q 004998 584 CKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSIC 663 (720)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~ 663 (720)
.+++...+.+.+..+.+ ...|.+++|+|++++||+|+.|+.|++||+.+.. ......|.+.|++|+
T Consensus 207 v~i~d~~~~~~~~~~~~------~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~--------~~~~~~~~~~i~~v~ 272 (337)
T d1gxra_ 207 VRSWDLREGRQLQQHDF------TSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD--------KYQLHLHESCVLSLK 272 (337)
T ss_dssp EEEEETTTTEEEEEEEC------SSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC--------EEEECCCSSCEEEEE
T ss_pred ccccccccceeeccccc------ccceEEEEEcccccccceeccccccccccccccc--------cccccccccccceEE
Confidence 34444455566665544 7889999999999999999999999999987652 234455678899999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEEEecCccceE
Q 004998 664 WNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 664 ~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|+|+ +++|||++.||+|+|||+.+++.+.+ |++++|+|.+.++++|+.|..-
T Consensus 273 ~s~~-g~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~s~D~~I 330 (337)
T d1gxra_ 273 FAYC-GKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKA 330 (337)
T ss_dssp ECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCE
T ss_pred ECCC-CCEEEEEeCCCeEEEEECCCCCEEEEccCCCCEEEEEEeCCCCEEEEEeCCCeE
Confidence 9996 46999999999999999999999876 8999999999999999988643
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.39 E-value=2e-12 Score=133.91 Aligned_cols=108 Identities=11% Similarity=0.100 Sum_probs=91.9
Q ss_pred CCCCCCCCCeEEEEECCCCCE-EEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCC
Q 004998 601 GDLLNSSNLVCSLSFDRDGEL-FAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 601 ~~~~~~~~~V~sv~f~~dg~~-lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D 678 (720)
..+.+|.+.|.+|+|+|+|++ ||||+.|++|+|||+++. .+...+ .|...|.+|+|+|+ +++||+++.|
T Consensus 140 ~~l~~h~~~v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~--------~~~~~~~~~~~~i~~v~~~p~-~~~l~~~~~d 210 (311)
T d1nr0a1 140 GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF--------KFKSTFGEHTKFVHSVRYNPD-GSLFASTGGD 210 (311)
T ss_dssp BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB--------EEEEEECCCSSCEEEEEECTT-SSEEEEEETT
T ss_pred ccccccccccccccccccceeeeccccccccccccccccc--------ccccccccccccccccccCcc-cccccccccc
Confidence 346678999999999999985 899999999999998875 233333 34778999999995 5699999999
Q ss_pred CcEEEEECCCCcEEEE--------------EEEEeecCCceEEEecCccceEE
Q 004998 679 GVVQVGQVLHLIYFSA--------------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 679 ~~v~lWDv~tg~~~~~--------------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
++|+|||+.++..+.+ |++++|+|.+..+++|+.|..-+
T Consensus 211 ~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~tgs~Dg~v~ 263 (311)
T d1nr0a1 211 GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIK 263 (311)
T ss_dssp SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred ccccccccccccccccccccccccccccccccccccCCCCCEEEEEeCCCeEE
Confidence 9999999999987764 78999999999999999987543
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.38 E-value=6.7e-13 Score=140.54 Aligned_cols=102 Identities=13% Similarity=0.174 Sum_probs=84.7
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
-.+|.|++|+|||++||+|+.|+.|+|||.++... ..+..+ .|.+.|++|+|+|+ +++||||+.|++|+|||
T Consensus 7 ~~pIt~~~~s~dg~~la~~~~~~~i~iw~~~~~~~------~~~~~l~gH~~~V~~l~fsp~-~~~l~s~s~D~~i~vWd 79 (371)
T d1k8kc_ 7 VEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW------VQVHELKEHNGQVTGVDWAPD-SNRIVTCGTDRNAYVWT 79 (371)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEE------EEEEEEECCSSCEEEEEEETT-TTEEEEEETTSCEEEEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEECCCCCE------EEEEEecCCCCCEEEEEECCC-CCEEEEEECCCeEEEEe
Confidence 36799999999999999999999999999765310 123344 45788999999996 56999999999999999
Q ss_pred CCCCcEEEE---------EEEEeecCCceEEEecCccce
Q 004998 686 VLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 686 v~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+.+++.... |+|++|+|.+..+..|+-|..
T Consensus 80 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~~ 118 (371)
T d1k8kc_ 80 LKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRV 118 (371)
T ss_dssp EETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSS
T ss_pred ecccccccccccccccccccccccccccccceeecccCc
Confidence 988765433 899999999999999887764
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.38 E-value=2.1e-12 Score=132.13 Aligned_cols=37 Identities=14% Similarity=0.299 Sum_probs=33.9
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcc
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAI 639 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~ 639 (720)
|.||.+.|++|+|+|||++|||||.|++|+|||+.+.
T Consensus 51 L~GH~~~I~~l~~s~~~~~l~sgs~Dg~v~iWd~~~~ 87 (340)
T d1tbga_ 51 LRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTT 87 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTT
T ss_pred ECCCCCCEEEEEECCCCCEEEEEECCCceeeeecccc
Confidence 4567999999999999999999999999999998764
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.38 E-value=1.6e-12 Score=136.64 Aligned_cols=133 Identities=13% Similarity=0.084 Sum_probs=96.9
Q ss_pred hhhhccccceEEeeeec--cCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccc-----cccccceEEecC
Q 004998 583 LCKYLSFSKLRVKADLN--QGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN-----RDIHYPVVEMAS 655 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~--~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~-----~~~~~~~~~~~~ 655 (720)
..+++...+.+.+..+. ...+.+|.+.|.+++|+|+|++||+|+.|++|+|||+.+..... ....+......|
T Consensus 228 ~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (388)
T d1erja_ 228 AVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGH 307 (388)
T ss_dssp CEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECC
T ss_pred eEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEECCCcEEEEeccCCccccccccccccceeeecccc
Confidence 34455555556666665 23456789999999999999999999999999999987642211 111122234456
Q ss_pred CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEe------ecCCceEEEecCccceE
Q 004998 656 RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIV------LNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 656 ~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~------~~~~~~~~~~~~~~~~~ 716 (720)
...|.+++|+|+ +.+||+|+.||+|+|||+.+|+++.+ |++++ |+|.+.++++|+-|..-
T Consensus 308 ~~~v~~~~~s~~-~~~l~sg~~dg~i~vwd~~~~~~~~~l~~H~~~V~~~~~~~~~~~spd~~~l~s~s~Dg~I 380 (388)
T d1erja_ 308 KDFVLSVATTQN-DEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKA 380 (388)
T ss_dssp SSCEEEEEECGG-GCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEE
T ss_pred cceEEEEEECCC-CCEEEEEeCCCEEEEEECCCCcEEEEEeCCCCCEEEEEEecCcccCCCCCEEEEEeCCCEE
Confidence 788999999996 46999999999999999999999886 66665 67789999999988643
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.37 E-value=9.2e-13 Score=133.80 Aligned_cols=108 Identities=9% Similarity=0.054 Sum_probs=83.1
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
.+|.+.|++|+|+|||++|||||.|++|||||+.+... .........|.+.|.||+|+|+++.+|+||+.||+|++
T Consensus 8 ~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~----~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg~~d~~v~~ 83 (342)
T d1yfqa_ 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK----NVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTT----EEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred CCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCc----ceEEEEecCCCCCEEEEEEeCCCCCEEEEcccccceee
Confidence 45799999999999999999999999999999865411 01122344678899999999987789999999999999
Q ss_pred EECCCCcEEEE--------EEEEeecCCceEEEecCccce
Q 004998 684 GQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 684 WDv~tg~~~~~--------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
||+.++..... ..+..+.+....+.+++.|..
T Consensus 84 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (342)
T d1yfqa_ 84 VDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGL 123 (342)
T ss_dssp ECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSE
T ss_pred eecccccccccccccccccccccccccccccccccccccc
Confidence 99998877665 234445555556666655543
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.37 E-value=2e-12 Score=134.05 Aligned_cols=125 Identities=15% Similarity=0.206 Sum_probs=90.9
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEE
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLS 660 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~ 660 (720)
++..+++...+.+.+..++ +|...|++++|+|||++||+|+.|++|+|||..+......-.........|.+.|+
T Consensus 168 d~~i~i~d~~~~~~~~~~~-----~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~h~~~V~ 242 (311)
T d1nr0a1 168 DNTVAIFEGPPFKFKSTFG-----EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF 242 (311)
T ss_dssp TSCEEEEETTTBEEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEE
T ss_pred ccccccccccccccccccc-----cccccccccccCcccccccccccccccccccccccccccccccccccccccccccc
Confidence 3445566666666666664 35889999999999999999999999999998764211100000112234577899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE----------EEEEeecCCceEEEecCcc
Q 004998 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA----------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 661 ~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~----------v~~v~~~~~~~~~~~~~~~ 713 (720)
+|+|+|+ +++||||+.||+|+|||+++++++++ +.++.|++.. +.+++.|
T Consensus 243 ~~~~s~~-~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~~--l~s~s~d 302 (311)
T d1nr0a1 243 GLTWSPD-GTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA--LVSISAN 302 (311)
T ss_dssp EEEECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSC--EEEEETT
T ss_pred ccccCCC-CCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEecCCE--EEEEECC
Confidence 9999996 46999999999999999999999887 4466666654 4444444
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.34 E-value=2e-12 Score=136.78 Aligned_cols=120 Identities=9% Similarity=0.117 Sum_probs=91.8
Q ss_pred hhhccc--cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEE
Q 004998 584 CKYLSF--SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLS 660 (720)
Q Consensus 584 ~~~~~~--~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~ 660 (720)
.++|.. .++..+..|+ +|.+.|++|+|+|||++|||||.|++|+|||+.+... .+.... .+...|.
T Consensus 31 i~iw~~~~~~~~~~~~l~-----gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~------~~~~~~~~~~~~v~ 99 (371)
T d1k8kc_ 31 VHIYEKSGNKWVQVHELK-----EHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW------KPTLVILRINRAAR 99 (371)
T ss_dssp EEEEEEETTEEEEEEEEE-----CCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE------EEEEECCCCSSCEE
T ss_pred EEEEECCCCCEEEEEEec-----CCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccccc------cccccccccccccc
Confidence 344444 2344555554 5689999999999999999999999999999865421 122222 3467899
Q ss_pred EEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-----------EEEEeecCCceEEEecCccce
Q 004998 661 SICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-----------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 661 ~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-----------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
+++|+|+ ++.||+++.|++|++|++..+..... |+|++|+|.+..+++|+.|..
T Consensus 100 ~i~~~p~-~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D~~ 164 (371)
T d1k8kc_ 100 CVRWAPN-EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFK 164 (371)
T ss_dssp EEEECTT-SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred ccccccc-cccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccCcE
Confidence 9999996 56999999999999999876543211 899999999999999988754
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.29 E-value=3.6e-12 Score=129.34 Aligned_cols=104 Identities=11% Similarity=0.058 Sum_probs=81.0
Q ss_pred CCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe--cCCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 603 LLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM--ASRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~--~~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
+.||.+.|++|+|+|||++|||||.|++|+|||+.+.. ++..+ .|...|++++|+|++ .+++++.|++
T Consensus 8 ~~GH~~~V~~l~~s~dg~~l~s~s~Dg~v~vWd~~~~~--------~~~~~~~~h~~~v~~v~~~~~g--~~~~~~~d~~ 77 (299)
T d1nr0a2 8 RYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGI--------SNRVFPDVHATMITGIKTTSKG--DLFTVSWDDH 77 (299)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--------EEECSSCSCSSCEEEEEECTTS--CEEEEETTTE
T ss_pred cCCCCCCcEEEEECCCCCEEEEEcCCCeEEEEECCCCc--------EEEEEcCCCCCcEEEEEeeccc--eeecccceee
Confidence 46789999999999999999999999999999987752 22222 246789999999964 3677788999
Q ss_pred EEEEECCCCcE-----EEE-----EEEEeecCCceEEEecCccceE
Q 004998 681 VQVGQVLHLIY-----FSA-----LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWDv~tg~~-----~~~-----v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|++||+..... +.. +.+++|++.+..+..+..+.++
T Consensus 78 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~ 123 (299)
T d1nr0a2 78 LKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIA 123 (299)
T ss_dssp EEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEE
T ss_pred EEEeccCCcccccccccccccccccccccccccccccccccccccc
Confidence 99999854321 111 7888999888888777666554
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.28 E-value=1e-11 Score=127.04 Aligned_cols=102 Identities=13% Similarity=0.107 Sum_probs=82.8
Q ss_pred CCCCCCC-eEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCc
Q 004998 603 LLNSSNL-VCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGV 680 (720)
Q Consensus 603 ~~~~~~~-V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~ 680 (720)
|.||.+. |+|++| ||++|||||.|++|+|||+.+. .++..+. |.+.|++|+|+|+ ++|+||+.||+
T Consensus 8 L~GH~~~vitc~~~--~~~~l~tgs~Dg~i~vWd~~~~--------~~~~~l~~H~~~V~~l~~s~~--~~l~s~s~D~~ 75 (355)
T d1nexb2 8 LRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINK--------KFLLQLSGHDGGVWALKYAHG--GILVSGSTDRT 75 (355)
T ss_dssp EECCSSSCEEEEEE--ETTEEEEEETTTEEEEEETTTT--------EEEEEEECCSSCEEEEEEETT--TEEEEEETTCC
T ss_pred ECCcCCCcEEEEEE--CCCEEEEEeCCCeEEEEECCCC--------cEEEEEECCCCCEEEEEEcCC--CEEEEEecccc
Confidence 4566664 567766 5889999999999999998776 2455554 5788999999983 58999999999
Q ss_pred EEEEECCCCcEEEE---------EEEEeecCCceEEEecCccceE
Q 004998 681 VQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 681 v~lWDv~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
|++||+.+++++.. ...+.+++.+..+..|+.|...
T Consensus 76 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i 120 (355)
T d1nexb2 76 VRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTL 120 (355)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEEEEETTEEEEEEEETTSEE
T ss_pred cccccccccccccccccccccccccccccccccceeeeecCCCcE
Confidence 99999999988765 5667888999999988887654
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.26 E-value=1.5e-11 Score=123.33 Aligned_cols=122 Identities=11% Similarity=0.143 Sum_probs=96.6
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCC--------------------CEEEEeeCCCcEEEeeCCccccc
Q 004998 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDG--------------------ELFAAAGVNKKIKVFECDAIINE 642 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg--------------------~~lat~~~d~~i~iwd~~~~~~~ 642 (720)
..+++...+.+.+..+. +|...|.+++|+|++ .++++|+.|++|++||+.+.
T Consensus 166 ~v~~~~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~--- 237 (317)
T d1vyhc1 166 TVRVWVVATKECKAELR-----EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG--- 237 (317)
T ss_dssp CEEEEETTTCCEEEEEC-----CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT---
T ss_pred eEEEEeeccceeeEEEe-----cCCCCceEEEEeeccccceeeccccceeeeeccCCceeEeccCCCEEEEEECCCC---
Confidence 34444555555555554 347778888887764 57999999999999998776
Q ss_pred ccccccceEEe-cCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------EEEEeecCCceEEEecCccc
Q 004998 643 NRDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 643 ~~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~~~~ 714 (720)
.++..+ .|...|.+++|+|+ +.+||+|+.||+|+|||+.+++++.+ |++++|++.+..+++|+.|.
T Consensus 238 -----~~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~s~~~~~l~s~s~Dg 311 (317)
T d1vyhc1 238 -----MCLMTLVGHDNWVRGVLFHSG-GKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQ 311 (317)
T ss_dssp -----EEEEEEECCSSCEEEEEECSS-SSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTS
T ss_pred -----cEEEEEeCCCCCEEEEEECCC-CCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCC
Confidence 345444 35778999999995 56999999999999999999998876 89999999999999999997
Q ss_pred eEEc
Q 004998 715 VKYL 718 (720)
Q Consensus 715 ~~~~ 718 (720)
.-++
T Consensus 312 ~i~i 315 (317)
T d1vyhc1 312 TVKV 315 (317)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 5443
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.25 E-value=2.7e-11 Score=122.07 Aligned_cols=119 Identities=15% Similarity=0.166 Sum_probs=88.4
Q ss_pred hhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE-ecCCCCEEEEE
Q 004998 585 KYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE-MASRSKLSSIC 663 (720)
Q Consensus 585 ~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~i~~v~ 663 (720)
+++.....+....+. ..|...|.+|+|+|||.+||+|+.|++|+|||+.+... .... ..|...|.+++
T Consensus 144 ~~~~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~-------~~~~~~~h~~~v~~~~ 212 (287)
T d1pgua2 144 QVFKLSDLEVSFDLK----TPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREV-------KTSRWAFRTSKINAIS 212 (287)
T ss_dssp EEEETTEEEEEEECS----SCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-------EECCSCCCSSCEEEEE
T ss_pred eeeeccccceeeeee----eccCCceeEEEeccCccccccccccccccceeeccccc-------ccccccccccccceee
Confidence 444444444444433 24577899999999999999999999999999876521 1111 23467899999
Q ss_pred EecCC---------CCEEEEEeCCCcEEEEECCC-CcEEEE-------EEEEeecCCceEEEecCccce
Q 004998 664 WNSYI---------KSQIASSNFEGVVQVGQVLH-LIYFSA-------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 664 ~~~~~---------~~~laS~s~D~~v~lWDv~t-g~~~~~-------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
|+|.. ..+||||+.|++|+|||+.+ ++.+.. |++++|++.+. +.+++.|-.
T Consensus 213 ~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~~-l~s~g~D~~ 280 (287)
T d1pgua2 213 WKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADAC 280 (287)
T ss_dssp ECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSC
T ss_pred ecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCCE-EEEEECCCe
Confidence 99854 46899999999999999987 445554 99999999875 667776743
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.21 E-value=5.2e-11 Score=120.91 Aligned_cols=113 Identities=9% Similarity=0.182 Sum_probs=88.6
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe----cCCCC
Q 004998 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM----ASRSK 658 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----~~~~~ 658 (720)
..+++.....+.+..+. +|...|.+++|++ ++||+||.|++|+|||+.... +...+ .+...
T Consensus 198 ~i~~~d~~~~~~~~~~~-----~~~~~v~~~~~~~--~~l~s~s~d~~i~iwd~~~~~--------~~~~~~~~~~~~~~ 262 (342)
T d2ovrb2 198 SIRVWDVETGNCIHTLT-----GHQSLTSGMELKD--NILVSGNADSTVKIWDIKTGQ--------CLQTLQGPNKHQSA 262 (342)
T ss_dssp CEEEEETTTCCEEEEEC-----CCCSCEEEEEEET--TEEEEEETTSCEEEEETTTCC--------EEEEECSTTSCSSC
T ss_pred eEEEeecccceeeeEec-----ccccceeEEecCC--CEEEEEcCCCEEEEEeccccc--------ccccccccceeeec
Confidence 44555556666666554 4578899988865 699999999999999987652 12221 23556
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------------EEEEeecCCceEEEecCcc
Q 004998 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 659 i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------------v~~v~~~~~~~~~~~~~~~ 713 (720)
+.+++|++ ++|+||+.||+|+|||+++|+++++ |++++|++.+..+++|+-|
T Consensus 263 ~~~~~~~~---~~~~s~s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~g~~d 326 (342)
T d2ovrb2 263 VTCLQFNK---NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRN 326 (342)
T ss_dssp EEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSS
T ss_pred eeecccCC---CeeEEEcCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEEEeCC
Confidence 88888876 5899999999999999999998874 8999999999999999877
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.19 E-value=3.3e-11 Score=125.04 Aligned_cols=122 Identities=4% Similarity=-0.016 Sum_probs=91.4
Q ss_pred hccccceEEeeeeccCCCCCCCCCeEEEEECCCCCE-EEEeeCCCcEEEeeCCcccccccccccceEEe-cCCCCEEEEE
Q 004998 586 YLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGEL-FAAAGVNKKIKVFECDAIINENRDIHYPVVEM-ASRSKLSSIC 663 (720)
Q Consensus 586 ~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~-lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~~~~~i~~v~ 663 (720)
++.+.+.+.+..+ .+|...|.+|+|+|++.+ +++||.|+.|++||....... ...... .+...|.+|+
T Consensus 143 ~~~~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~-----~~~~~~~~~~~~v~~v~ 212 (325)
T d1pgua1 143 FISWDSGNSLGEV-----SGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS-----ASDRTHHKQGSFVRDVE 212 (325)
T ss_dssp EEETTTCCEEEEC-----CSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEE-----EEECSSSCTTCCEEEEE
T ss_pred EEeecccccceee-----eecccccccccccccccceEEEeecccccccccccccccc-----eecccccCCCCccEEee
Confidence 3344444445444 456899999999999985 789999999999998664211 111111 2356799999
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCcEEEE-----------EEEEeecCCceEEEecCccceEEc
Q 004998 664 WNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-----------LYCIVLNKLLIIFRYGMFQEVKYL 718 (720)
Q Consensus 664 ~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-----------v~~v~~~~~~~~~~~~~~~~~~~~ 718 (720)
|+|+.+.+|||++.||+|+|||+++++++.+ +++++| +.+.++++|+.|..-++
T Consensus 213 ~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~-~dg~~l~s~s~D~~i~i 277 (325)
T d1pgua1 213 FSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSW-LDSQKFATVGADATIRV 277 (325)
T ss_dssp ECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEE-SSSSEEEEEETTSEEEE
T ss_pred eccccceeccccccccceeeeeeccccccccccccccccccceeeeec-cCCCEEEEEeCCCeEEE
Confidence 9998888999999999999999999999886 455555 46788899998876543
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.17 E-value=8.6e-11 Score=121.76 Aligned_cols=120 Identities=13% Similarity=0.171 Sum_probs=85.0
Q ss_pred hhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCC-CCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCC-
Q 004998 582 GLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRD-GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSK- 658 (720)
Q Consensus 582 ~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~d-g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~- 658 (720)
+...++.....+....+. .+..|...|.+|+|+|| +.+||+|+.|++|+|||..+.. ++..+. |...
T Consensus 182 ~~v~~~d~~~~~~~~~~~--~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~--------~~~~l~~~~~~v 251 (325)
T d1pgua1 182 GSVVFYQGPPFKFSASDR--THHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGE--------FLKYIEDDQEPV 251 (325)
T ss_dssp TEEEEEETTTBEEEEEEC--SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCC--------EEEECCBTTBCC
T ss_pred cccccccccccccceecc--cccCCCCccEEeeeccccceeccccccccceeeeeecccc--------cccccccccccc
Confidence 344555555555555543 24567889999999997 5899999999999999987652 233332 2333
Q ss_pred ---EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEEE-----------EEEeecCCceEEEecCccc
Q 004998 659 ---LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSAL-----------YCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 659 ---i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~v-----------~~v~~~~~~~~~~~~~~~~ 714 (720)
+.+++|.+ +.+|||++.|++|+|||+++++++.++ .++.|++.+ .+++|+.|.
T Consensus 252 ~~~~~s~~~~d--g~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~s~dg 318 (325)
T d1pgua1 252 QGGIFALSWLD--SQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNG-RIISLSLDG 318 (325)
T ss_dssp CSCEEEEEESS--SSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETT-EEEEEETTS
T ss_pred ccceeeeeccC--CCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEEEECCCC-EEEEEECCC
Confidence 45555543 569999999999999999999999872 345555544 567777775
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.12 E-value=1.2e-10 Score=117.92 Aligned_cols=104 Identities=12% Similarity=0.186 Sum_probs=86.6
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv 686 (720)
...+.+++|+||+++||+|+.|+.|++||+++... ..+....|...|++++|+|+ +.+||+++.|+.|++||+
T Consensus 136 ~~~~~~~~~s~~~~~l~~g~~dg~i~~~d~~~~~~------~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~d~~i~~~~~ 208 (299)
T d1nr0a2 136 SYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASV------SEVKTIVHPAEITSVAFSNN-GAFLVATDQSRKVIPYSV 208 (299)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEE------EEEEEEECSSCEEEEEECTT-SSEEEEEETTSCEEEEEG
T ss_pred ccccccccccccccccccccccccccccccccccc------cccccccccccccccccccc-cccccccccccccccccc
Confidence 35678999999999999999999999999865410 13345567889999999995 469999999999999999
Q ss_pred CCCcEEEE----------EEEEeecCCceEEEecCccceEE
Q 004998 687 LHLIYFSA----------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 687 ~tg~~~~~----------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
.++..+.. |+|++|+|.+.++++|+.|..-+
T Consensus 209 ~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~sgs~dg~i~ 249 (299)
T d1nr0a2 209 ANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVI 249 (299)
T ss_dssp GGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred cccccccccccccccccccccccccccccceEEEcCCCEEE
Confidence 88876542 89999999999999999886543
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.09 E-value=7.9e-11 Score=120.24 Aligned_cols=113 Identities=11% Similarity=0.080 Sum_probs=81.6
Q ss_pred hhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEE
Q 004998 584 CKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSIC 663 (720)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~ 663 (720)
.+++...+...+..+ .+|...|.+++|+ +++||+|+.|++|+|||+.+.. .. ...+...+.+++
T Consensus 225 i~i~d~~~~~~~~~~-----~~h~~~v~~~~~~--~~~l~~~~~dg~i~iwd~~~~~--------~~-~~~~~~~~~~~~ 288 (355)
T d1nexb2 225 IRIWDLENGELMYTL-----QGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYS--------RK-FSYHHTNLSAIT 288 (355)
T ss_dssp EEEEETTTCCEEEEE-----CCCSSCCCEEEEC--SSEEEEECTTSEEEEEETTTCC--------EE-EEEECTTCCCCC
T ss_pred EEeeecccccccccc-----ccccccccccccc--cceeeeeecccccccccccccc--------ee-cccccCCceEEE
Confidence 344444455555555 4568999999997 4799999999999999987652 11 112345566665
Q ss_pred EecCCCCEEEEEeCCCcEEEEECCCCcEEEE--------EEEEeecCCceEEEecCccc
Q 004998 664 WNSYIKSQIASSNFEGVVQVGQVLHLIYFSA--------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 664 ~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~--------v~~v~~~~~~~~~~~~~~~~ 714 (720)
+.+.++.+|++|+ |++|+|||+++|+++.. |++++|++. .++..++.|-
T Consensus 289 ~~~~~~~~l~~g~-d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~-~~~~~~s~dg 345 (355)
T d1nexb2 289 TFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK-TLVAAVEKDG 345 (355)
T ss_dssp EEEECSSEEEEEE-TTEEEEEETTTCCBCCSCTTTTCSEEEEEEEETT-EEEEEEESSS
T ss_pred EEcCCCCEEEEEe-CCEEEEEECCCCCEEEEEecCCCCCEEEEEEcCC-eEEEEEECCC
Confidence 5444566777765 99999999999998853 999999997 4677777774
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.09 E-value=3.2e-10 Score=112.18 Aligned_cols=78 Identities=13% Similarity=0.166 Sum_probs=65.3
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 604 LNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
..|...|.|++| ||++|||||.|++|||||+.+. .++..+. |.+.|.+|+|++ ++||||+.|++|+
T Consensus 12 ~~~~~~V~c~~~--d~~~l~sgs~Dg~i~vWd~~~~--------~~~~~l~~H~~~V~~v~~~~---~~l~s~s~D~~i~ 78 (293)
T d1p22a2 12 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTL--------ECKRILTGHTGSVLCLQYDE---RVIITGSSDSTVR 78 (293)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSC--------CEEEEECCCSSCEEEEECCS---SEEEEEETTSCEE
T ss_pred CCCCCCEEEEEE--cCCEEEEEeCCCeEEEEECCCC--------cEEEEEecCCCCEeeeeccc---ceeeccccccccc
Confidence 345788998765 7999999999999999998765 3555554 578899999864 5999999999999
Q ss_pred EEECCCCcEEEE
Q 004998 683 VGQVLHLIYFSA 694 (720)
Q Consensus 683 lWDv~tg~~~~~ 694 (720)
+||+.++.....
T Consensus 79 ~~~~~~~~~~~~ 90 (293)
T d1p22a2 79 VWDVNTGEMLNT 90 (293)
T ss_dssp EEESSSCCEEEE
T ss_pred cccccccccccc
Confidence 999999987765
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.06 E-value=4e-10 Score=114.19 Aligned_cols=88 Identities=11% Similarity=0.067 Sum_probs=68.0
Q ss_pred cceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCC
Q 004998 590 SKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYI 668 (720)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~ 668 (720)
..++....|+ ||.+.|.+ +|++||++|||||.|++|||||+.+. .++..+. |.+.|.+++|+|
T Consensus 4 ~~~~~~~~l~-----GH~~~V~s-~~~~~g~~l~sgs~Dg~i~vWd~~~~--------~~~~~~~~h~~~V~~v~~~~-- 67 (342)
T d2ovrb2 4 GELKSPKVLK-----GHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTG--------KCLRTLVGHTGGVWSSQMRD-- 67 (342)
T ss_dssp SCCCCCEEEE-----CSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTC--------CEEEECCCCSSCEEEEEEET--
T ss_pred CCCCcCEEEC-----CcCCceEE-EEEECCCEEEEEeCCCeEEEEECCCC--------CEEEEEeCCCCCEEEEEeCC--
Confidence 3444455554 45777654 36668999999999999999998776 2455543 577899999997
Q ss_pred CCEEEEEeCCCcEEEEECCCCcEEEE
Q 004998 669 KSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 669 ~~~laS~s~D~~v~lWDv~tg~~~~~ 694 (720)
++|+|++.|+++++|+.........
T Consensus 68 -~~l~s~s~D~~~~~~~~~~~~~~~~ 92 (342)
T d2ovrb2 68 -NIIISGSTDRTLKVWNAETGECIHT 92 (342)
T ss_dssp -TEEEEEETTSCEEEEETTTTEEEEE
T ss_pred -Cccccceecccccccccccccceec
Confidence 4899999999999999988876554
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.03 E-value=4.6e-10 Score=115.60 Aligned_cols=98 Identities=5% Similarity=-0.074 Sum_probs=81.8
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCC--cEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNK--KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQ 682 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~ 682 (720)
+|.+.|.+++|+|||++||++|.+. .|+|||..+.. +.....+...|.+++|+|+ +.+|++++.|+.+.
T Consensus 40 ~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~--------~~~~~~~~~~v~~~~~spd-g~~l~~~~~~~~~~ 110 (360)
T d1k32a3 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGK--------AEKFEENLGNVFAMGVDRN-GKFAVVANDRFEIM 110 (360)
T ss_dssp SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCC--------EEECCCCCCSEEEEEECTT-SSEEEEEETTSEEE
T ss_pred cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCc--------EEEeeCCCceEEeeeeccc-ccccceeccccccc
Confidence 4678899999999999999887764 89999987752 2233345788999999996 46999999999999
Q ss_pred EEECCCCcEEEE-------EEEEeecCCceEEEecC
Q 004998 683 VGQVLHLIYFSA-------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 683 lWDv~tg~~~~~-------v~~v~~~~~~~~~~~~~ 711 (720)
+||+.++++... +.+++|+|.+..+++..
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~ 146 (360)
T d1k32a3 111 TVDLETGKPTVIERSREAMITDFTISDNSRFIAYGF 146 (360)
T ss_dssp EEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEE
T ss_pred cccccccceeeeeecccccccchhhccceeeeeeec
Confidence 999999998765 67899999999988543
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.91 E-value=1.5e-09 Score=111.73 Aligned_cols=95 Identities=7% Similarity=-0.025 Sum_probs=77.0
Q ss_pred EEEECC-CCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCC--CcEEEEECCC
Q 004998 612 SLSFDR-DGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFE--GVVQVGQVLH 688 (720)
Q Consensus 612 sv~f~~-dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D--~~v~lWDv~t 688 (720)
+=.||| ||+++|+++ ++.|.|||.... ++..+.|...|.+++|+|+++ +||+++.| .+|++||+.+
T Consensus 7 ~~~fSP~dG~~~a~~~-~g~v~v~d~~~~---------~~~~~~~~~~v~~~~~spDg~-~l~~~~~~~g~~v~v~d~~~ 75 (360)
T d1k32a3 7 AEDFSPLDGDLIAFVS-RGQAFIQDVSGT---------YVLKVPEPLRIRYVRRGGDTK-VAFIHGTREGDFLGIYDYRT 75 (360)
T ss_dssp EEEEEECGGGCEEEEE-TTEEEEECTTSS---------BEEECSCCSCEEEEEECSSSE-EEEEEEETTEEEEEEEETTT
T ss_pred cccccCCCCCEEEEEE-CCeEEEEECCCC---------cEEEccCCCCEEEEEECCCCC-EEEEEEcCCCCEEEEEECCC
Confidence 346999 999999987 579999998654 344567788999999999765 66655544 3899999999
Q ss_pred CcEEEE------EEEEeecCCceEEEecCccceEE
Q 004998 689 LIYFSA------LYCIVLNKLLIIFRYGMFQEVKY 717 (720)
Q Consensus 689 g~~~~~------v~~v~~~~~~~~~~~~~~~~~~~ 717 (720)
|+..+. +++++|+|.+..+++++.+...+
T Consensus 76 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~ 110 (360)
T d1k32a3 76 GKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIM 110 (360)
T ss_dssp CCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEE
T ss_pred CcEEEeeCCCceEEeeeecccccccceeccccccc
Confidence 987664 89999999999999998887554
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.87 E-value=6.3e-10 Score=111.79 Aligned_cols=101 Identities=8% Similarity=0.051 Sum_probs=79.0
Q ss_pred EEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEE
Q 004998 593 RVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQI 672 (720)
Q Consensus 593 ~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~l 672 (720)
+++++| .||...|.+|+|+| |||||.|++|++||+.+.. ..|...|.+++|++. ..+
T Consensus 4 ~~i~~l-----~gH~~~I~~l~~s~----l~sgs~Dg~v~~Wd~~~~~------------~~h~~~V~~~~~~~~--~~~ 60 (287)
T d1pgua2 4 EVLKTI-----SGHNKGITALTVNP----LISGSYDGRIMEWSSSSMH------------QDHSNLIVSLDNSKA--QEY 60 (287)
T ss_dssp EEEEEE-----CCCSSCEEEEETTT----TEEEETTSCEEETTTTEEE------------CCCCSCEEEEECCST--TCC
T ss_pred ceeEEE-----CCCCCceEEEEECc----EEEEeCCCeEEEEECCCCC------------CCCCCCEEEEEecCC--CeE
Confidence 556666 45699999999998 9999999999999987652 134678999999974 468
Q ss_pred EEEeCCCcEEEEECCCCcEEEEEEEEeecCCceEEEecCccceE
Q 004998 673 ASSNFEGVVQVGQVLHLIYFSALYCIVLNKLLIIFRYGMFQEVK 716 (720)
Q Consensus 673 aS~s~D~~v~lWDv~tg~~~~~v~~v~~~~~~~~~~~~~~~~~~ 716 (720)
+|++.|++|++||+.+.+.-....++++++.+..+..+.-+.+.
T Consensus 61 ~s~s~D~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (287)
T d1pgua2 61 SSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLL 104 (287)
T ss_dssp EEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEE
T ss_pred EEEeeccccccccccccccccceeeeeeccCCceEEEeecccce
Confidence 99999999999998765544446677888887777776665543
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=98.84 E-value=2.1e-09 Score=116.32 Aligned_cols=114 Identities=17% Similarity=0.058 Sum_probs=84.7
Q ss_pred hhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec----CCCC
Q 004998 583 LCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA----SRSK 658 (720)
Q Consensus 583 l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~----~~~~ 658 (720)
-..++.-.+.++++.+..| ..|.+++|+|||++|++++.|++|+|||+.+.... .+.++. +.+-
T Consensus 43 ~v~v~D~~t~~v~~~~~~g------~~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~------~~~~i~~~~~~~~~ 110 (432)
T d1qksa2 43 QIALIDGSTYEIKTVLDTG------YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT------TVAEIKIGSEARSI 110 (432)
T ss_dssp EEEEEETTTCCEEEEEECS------SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC------EEEEEECCSEEEEE
T ss_pred EEEEEECCCCcEEEEEeCC------CCeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCce------EEEEEecCCCCCCe
Confidence 4567777888999999752 45999999999999999999999999998775211 122222 1333
Q ss_pred EEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------------------EEEEeecCCceEEE
Q 004998 659 LSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------------------LYCIVLNKLLIIFR 708 (720)
Q Consensus 659 i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------------------v~~v~~~~~~~~~~ 708 (720)
+.++.|+|+++.++|+++.|++|+|||+.+++++.. ...|.+++.+..+.
T Consensus 111 ~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~ 178 (432)
T d1qksa2 111 ETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFI 178 (432)
T ss_dssp EECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEE
T ss_pred EEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEE
Confidence 555667777665568888899999999999998875 33567777775543
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.76 E-value=6.9e-09 Score=111.37 Aligned_cols=102 Identities=16% Similarity=0.076 Sum_probs=77.9
Q ss_pred hhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEec----CC
Q 004998 581 EGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA----SR 656 (720)
Q Consensus 581 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~----~~ 656 (720)
++-.++|.-.+.++++++..| ..|.+|+|+|||++|+++|.|++|+|||+.+.... .+.++. +.
T Consensus 41 dg~v~vwD~~t~~~~~~l~~g------~~~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~------~~~~i~~~~~~~ 108 (426)
T d1hzua2 41 AGQIALVDGDSKKIVKVIDTG------YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPT------KVAEIKIGIEAR 108 (426)
T ss_dssp TTEEEEEETTTCSEEEEEECC------SSEEEEEECTTSCEEEEEETTSEEEEEETTSSSCE------EEEEEECCSEEE
T ss_pred CCEEEEEECCCCcEEEEEeCC------CCeeEEEECCCCCEEEEEeCCCCEEEEEccCCcee------EEEEEeCCCCCc
Confidence 345677888888999999852 45899999999999999999999999999876211 111221 23
Q ss_pred CCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004998 657 SKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 657 ~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~ 694 (720)
+.+.+++|+|+++.+++++..|++|++||..+++++..
T Consensus 109 ~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~ 146 (426)
T d1hzua2 109 SVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQI 146 (426)
T ss_dssp EEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEE
T ss_pred ceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEE
Confidence 44667788887664556667899999999999998875
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=98.74 E-value=2.5e-08 Score=100.14 Aligned_cols=103 Identities=8% Similarity=0.078 Sum_probs=71.0
Q ss_pred CCeEEEE-ECCCCCEEEEeeCCCcEEEeeCCccccccccc-ccce-------EEecCCCCEEEEEEecCCCCEEEEEeCC
Q 004998 608 NLVCSLS-FDRDGELFAAAGVNKKIKVFECDAIINENRDI-HYPV-------VEMASRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 608 ~~V~sv~-f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~-~~~~-------~~~~~~~~i~~v~~~~~~~~~laS~s~D 678 (720)
..+.++. +..++..+++++.|++|.+|++.......... ..+. ....+...|++|+|+|++ ++||||+.|
T Consensus 194 ~~~~~~~~~~~~~~~~~~~s~dg~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp~~-~~lasg~~D 272 (342)
T d1yfqa_ 194 YQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH-KFLYTAGSD 272 (342)
T ss_dssp SCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT-CCEEEEETT
T ss_pred cceeeeEeecCCCCEEEeecCCCeEEEEEecCCcceeeccccceeeeeeeccCCCcccccceeEEecCCc-cEEEEECCC
Confidence 4455555 45677899999999999999986532111100 0000 112234569999999964 689999999
Q ss_pred CcEEEEECCCCcEEEE------EEEEeecCCceEEEecC
Q 004998 679 GVVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 679 ~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~ 711 (720)
|+|+|||+.+++.+.+ ..+++|++.+..++.++
T Consensus 273 g~v~vWD~~~~~~l~~~~~~~~~~~~~~s~~~~~l~~a~ 311 (342)
T d1yfqa_ 273 GIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLAT 311 (342)
T ss_dssp SCEEEEETTTTEEEEECCCCSSSEEEEEEECSSEEEEEE
T ss_pred CEEEEEECCCCcEEEEecCCCCCEEEEEEeCCCEEEEEE
Confidence 9999999999999987 34566666666665543
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=98.70 E-value=8e-08 Score=95.73 Aligned_cols=118 Identities=8% Similarity=0.013 Sum_probs=93.3
Q ss_pred hhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEE
Q 004998 584 CKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 584 ~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v 662 (720)
...+...+.+++++++.| ..+..|+|+|||++| ++++.+++|++||+.+. .++..+.....+..+
T Consensus 14 v~v~D~~t~~~~~~i~~g------~~p~~va~spdG~~l~v~~~~~~~i~v~d~~t~--------~~~~~~~~~~~~~~~ 79 (301)
T d1l0qa2 14 ISVIDVTSNKVTATIPVG------SNPMGAVISPDGTKVYVANAHSNDVSIIDTATN--------NVIATVPAGSSPQGV 79 (301)
T ss_dssp EEEEETTTTEEEEEEECS------SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT--------EEEEEEECSSSEEEE
T ss_pred EEEEECCCCeEEEEEECC------CCceEEEEeCCCCEEEEEECCCCEEEEEECCCC--------ceeeeeecccccccc
Confidence 345666788899998753 457899999999975 67788999999998876 245555555678999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------EEEEeecCCceEE-EecCccce
Q 004998 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------LYCIVLNKLLIIF-RYGMFQEV 715 (720)
Q Consensus 663 ~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------v~~v~~~~~~~~~-~~~~~~~~ 715 (720)
+|++++...++++..|+.+.+||..+++.+.. ..+++|++.+..+ ..+..+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~~~~~~~~~~~~ 139 (301)
T d1l0qa2 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKT 139 (301)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTE
T ss_pred ccccccccccccccccceeeecccccceeeeeccccccceEEEeecCCCeeeeeeccccc
Confidence 99998777778888899999999999998876 6789999988765 45555543
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.63 E-value=1.6e-07 Score=92.07 Aligned_cols=125 Identities=13% Similarity=0.183 Sum_probs=82.2
Q ss_pred chhhhhhhhccccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccc--------------
Q 004998 578 PFLEGLCKYLSFSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINEN-------------- 643 (720)
Q Consensus 578 ~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~-------------- 643 (720)
+-.++..++|...+.+++.+|+ +|.+.|.+|+| |+++|||||.|++|++||+.......
T Consensus 31 gs~Dg~i~vWd~~~~~~~~~l~-----~H~~~V~~v~~--~~~~l~s~s~D~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (293)
T d1p22a2 31 GLRDNTIKIWDKNTLECKRILT-----GHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRF 103 (293)
T ss_dssp EESSSCEEEEESSSCCEEEEEC-----CCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEEC
T ss_pred EeCCCeEEEEECCCCcEEEEEe-----cCCCCEeeeec--ccceeecccccccccccccccccccccccccccccccccc
Confidence 3445677888888888888875 45899999988 57899999999999999976521100
Q ss_pred ---------ccc----------c--cceE-EecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------
Q 004998 644 ---------RDI----------H--YPVV-EMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------- 694 (720)
Q Consensus 644 ---------~~~----------~--~~~~-~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------- 694 (720)
.+. . .... ...+...|.++.|.+ ..+++++.|++|++||+++++.+..
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~s~d~~i~~~d~~~~~~~~~~~~~~~~ 180 (293)
T d1p22a2 104 NNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD---KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 180 (293)
T ss_dssp CTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred cccceeecccccceeEeeccccccccccccccccccccccceecc---cccccccCCCceeeecCCCCcEEEEEcccccc
Confidence 000 0 0000 112344566666654 3677888888888888888888765
Q ss_pred EEEEeecCCceEEEecCccc
Q 004998 695 LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 695 v~~v~~~~~~~~~~~~~~~~ 714 (720)
+.++.+++. .+.+|..|.
T Consensus 181 v~~~~~~~~--~l~~~~~dg 198 (293)
T d1p22a2 181 IACLQYRDR--LVVSGSSDN 198 (293)
T ss_dssp EEEEEEETT--EEEEEETTS
T ss_pred cccccCCCC--eEEEecCCC
Confidence 455566543 455554443
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=98.60 E-value=3.3e-08 Score=100.48 Aligned_cols=91 Identities=7% Similarity=-0.047 Sum_probs=73.1
Q ss_pred EEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEE--ecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCc
Q 004998 613 LSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVE--MASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLI 690 (720)
Q Consensus 613 v~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~--~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~ 690 (720)
++|+++|+|||+++.|++|.|||+.+. ..+.. +.+...+.+|+|+|+++..+++++.|+.|.+||+.+++
T Consensus 2 ~a~~~~~~~l~~~~~~~~v~v~D~~t~--------~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~ 73 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNYPNNLHVVDVASD--------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK 73 (346)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTT--------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred ccCCCCCcEEEEEcCCCEEEEEECCCC--------CEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCe
Confidence 579999999999999999999999876 24443 33455678999999876556788899999999999999
Q ss_pred EEEE-------------EEEEeecCCceEEEecC
Q 004998 691 YFSA-------------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 691 ~~~~-------------v~~v~~~~~~~~~~~~~ 711 (720)
.+.+ ...++|++++..+.-..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~v~~s~DG~~l~v~~ 107 (346)
T d1jmxb_ 74 NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATV 107 (346)
T ss_dssp EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEE
T ss_pred eeeeecccccccccCCceEEEEEecCCCEEEEEe
Confidence 8876 24788999987665443
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.56 E-value=5e-08 Score=104.43 Aligned_cols=85 Identities=6% Similarity=-0.182 Sum_probs=68.6
Q ss_pred ECCCCC--EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEE
Q 004998 615 FDRDGE--LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYF 692 (720)
Q Consensus 615 f~~dg~--~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~ 692 (720)
|++|.+ ++++++.|++|+|||..+. ..+..+.+...+..|+|||++ .+|++++.|++|++||+.|++..
T Consensus 26 ~~~d~~~~~~V~~~~dg~v~vwD~~t~--------~~~~~l~~g~~~~~vafSPDG-k~l~~~~~d~~v~vwd~~t~~~~ 96 (426)
T d1hzua2 26 NDLDLPNLFSVTLRDAGQIALVDGDSK--------KIVKVIDTGYAVHISRMSASG-RYLLVIGRDARIDMIDLWAKEPT 96 (426)
T ss_dssp SCCCGGGEEEEEETTTTEEEEEETTTC--------SEEEEEECCSSEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCE
T ss_pred ccCCCCeEEEEEEcCCCEEEEEECCCC--------cEEEEEeCCCCeeEEEECCCC-CEEEEEeCCCCEEEEEccCCcee
Confidence 555543 6799999999999999887 356666666679999999965 58999999999999999999754
Q ss_pred EE------------EEEEeecCCceEEE
Q 004998 693 SA------------LYCIVLNKLLIIFR 708 (720)
Q Consensus 693 ~~------------v~~v~~~~~~~~~~ 708 (720)
.. +++++|+|++..+.
T Consensus 97 ~~~~i~~~~~~~~~~~s~~~spDG~~l~ 124 (426)
T d1hzua2 97 KVAEIKIGIEARSVESSKFKGYEDRYTI 124 (426)
T ss_dssp EEEEEECCSEEEEEEECCSTTCTTTEEE
T ss_pred EEEEEeCCCCCcceEEeeeecCCCCEEE
Confidence 32 67889999998753
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=98.40 E-value=7.8e-07 Score=88.25 Aligned_cols=88 Identities=9% Similarity=0.050 Sum_probs=66.9
Q ss_pred CCCeEEEEECCCCCEEEEeeC---CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 607 SNLVCSLSFDRDGELFAAAGV---NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
...+.+++|+++|..++.++. +++|++||..+. ..+..+.....+.+|+|+|+++.++++++.|++|+|
T Consensus 199 ~~~~~~~~~~~~g~~~~v~~~~~~~~~v~v~D~~t~--------~~~~~~~~~~~~~~va~spdg~~l~va~~~~~~i~v 270 (301)
T d1l0qa2 199 EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN--------KITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSV 270 (301)
T ss_dssp SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT--------EEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred cCCcceeeccccccccccccccceeeeeeeeecCCC--------eEEEEEcCCCCEEEEEEeCCCCEEEEEECCCCeEEE
Confidence 355788999999998665543 468999998776 234445555678999999987645578889999999
Q ss_pred EECCCCcEEEEEEEEeecCC
Q 004998 684 GQVLHLIYFSALYCIVLNKL 703 (720)
Q Consensus 684 WDv~tg~~~~~v~~v~~~~~ 703 (720)
||+.||+.+.++ .+..+|.
T Consensus 271 ~D~~t~~~~~~~-~vg~~P~ 289 (301)
T d1l0qa2 271 IDTATNTITATM-AVGKNPY 289 (301)
T ss_dssp EETTTTEEEEEE-ECSSSEE
T ss_pred EECCCCeEEEEE-eCCCCCc
Confidence 999999999875 3444443
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=98.34 E-value=5.2e-07 Score=91.17 Aligned_cols=113 Identities=9% Similarity=0.015 Sum_probs=79.8
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCC
Q 004998 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIK 669 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~ 669 (720)
.++++..+.+ .+.|.+|+|+|||++| ++++.|++|++|++....... ..+........+..++|+|++
T Consensus 26 ~l~~~~~~~~------~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~----~~~~~~~~~~~p~~l~~spDg- 94 (333)
T d1ri6a_ 26 ALTLTQVVDV------PGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL----TFAAESALPGSLTHISTDHQG- 94 (333)
T ss_dssp CEEEEEEEEC------SSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE----EEEEEEECSSCCSEEEECTTS-
T ss_pred CeEEEEEEcC------CCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcE----EEeeecccCCCceEEEEcCCC-
Confidence 4566666655 6789999999999987 566669999999986542110 122233344557789999975
Q ss_pred CEEEEEeC-CCcEEEEECCCCcEEEE---------EEEEeecCCceEEEecCccc
Q 004998 670 SQIASSNF-EGVVQVGQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 670 ~~laS~s~-D~~v~lWDv~tg~~~~~---------v~~v~~~~~~~~~~~~~~~~ 714 (720)
++|+++++ +++|.+|+...+..... +.++.|++.+..+..++.+.
T Consensus 95 ~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d~~~~~~~~~~~ 149 (333)
T d1ri6a_ 95 QFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQ 149 (333)
T ss_dssp SEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGG
T ss_pred CEEeecccCCCceeeeccccccceecccccCCCccceEEEeeecceeeecccccc
Confidence 57777775 77999999887765544 45688899988777666543
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=98.34 E-value=4.5e-07 Score=97.46 Aligned_cols=90 Identities=4% Similarity=-0.136 Sum_probs=70.0
Q ss_pred CCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcE--EE
Q 004998 616 DRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIY--FS 693 (720)
Q Consensus 616 ~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~--~~ 693 (720)
+++.-++++.+.|++|.|||.++. ..+..+.....+..++|||++ .+||+++.|++|++||+.|++. +.
T Consensus 29 ~~~~~~~v~~~d~g~v~v~D~~t~--------~v~~~~~~g~~~~~v~fSpDG-~~l~~~s~dg~v~~~d~~t~~~~~~~ 99 (432)
T d1qksa2 29 DLENLFSVTLRDAGQIALIDGSTY--------EIKTVLDTGYAVHISRLSASG-RYLFVIGRDGKVNMIDLWMKEPTTVA 99 (432)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTC--------CEEEEEECSSCEEEEEECTTS-CEEEEEETTSEEEEEETTSSSCCEEE
T ss_pred CCCcEEEEEEcCCCEEEEEECCCC--------cEEEEEeCCCCeeEEEECCCC-CEEEEEcCCCCEEEEEeeCCCceEEE
Confidence 444445799999999999999887 345555555579999999965 6999999999999999998863 22
Q ss_pred E----------EEEEeecCCceE-EEecCccc
Q 004998 694 A----------LYCIVLNKLLII-FRYGMFQE 714 (720)
Q Consensus 694 ~----------v~~v~~~~~~~~-~~~~~~~~ 714 (720)
+ +++++|+|+|.. +++++.+.
T Consensus 100 ~i~~~~~~~~~~~s~~~SpDG~~l~vs~~~~~ 131 (432)
T d1qksa2 100 EIKIGSEARSIETSKMEGWEDKYAIAGAYWPP 131 (432)
T ss_dssp EEECCSEEEEEEECCSTTCTTTEEEEEEEETT
T ss_pred EEecCCCCCCeEEecccCCCCCEEEEEcCCCC
Confidence 1 678889999986 47776554
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.31 E-value=4.1e-07 Score=91.68 Aligned_cols=85 Identities=7% Similarity=-0.093 Sum_probs=65.8
Q ss_pred CEEEEeeCCCcEEEeeCCcccccccccccceEEec--C-CCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEEE-
Q 004998 620 ELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMA--S-RSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSAL- 695 (720)
Q Consensus 620 ~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~-~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~v- 695 (720)
+||+||+.|++|+|||..+. ..+.++. . ...+.+++|+|+++.++++++.|++|.+||+.||+.+..+
T Consensus 2 ~~~vt~~~d~~v~v~D~~s~--------~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~~~ 73 (337)
T d1pbyb_ 2 DYILAPARPDKLVVIDTEKM--------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRID 73 (337)
T ss_dssp EEEEEEETTTEEEEEETTTT--------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEE
T ss_pred eEEEEEcCCCEEEEEECCCC--------eEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEEEe
Confidence 58999999999999999876 2333332 1 3447899999976644578888999999999999998763
Q ss_pred -----------EEEeecCCceEEEecCc
Q 004998 696 -----------YCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 696 -----------~~v~~~~~~~~~~~~~~ 712 (720)
+.++|+|.+..+..+..
T Consensus 74 ~~~~~~~~~~~~~v~~s~dg~~l~~~~~ 101 (337)
T d1pbyb_ 74 LSTPEERVKSLFGAALSPDGKTLAIYES 101 (337)
T ss_dssp CCBTTEEEECTTCEEECTTSSEEEEEEE
T ss_pred cCCCcccccceeeEEEcCCCcEEEEeec
Confidence 47789999887765543
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.25 E-value=1.5e-06 Score=87.45 Aligned_cols=80 Identities=9% Similarity=-0.056 Sum_probs=67.3
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lW 684 (720)
++...+.+++++|++.+++.+ +++|++||+.+. ..+..+.....+.+++|+|++ .+|++++.|++|+||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~--~~~i~v~d~~~~--------~~~~~~~~~~~~~~~~~s~dG-~~l~v~~~~~~i~v~ 306 (337)
T d1pbyb_ 238 IMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN--------ASIKRVPLPHSYYSVNVSTDG-STVWLGGALGDLAAY 306 (337)
T ss_dssp ECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT--------EEEEEEECSSCCCEEEECTTS-CEEEEESBSSEEEEE
T ss_pred CCCcceEEEEecccceEEEEc--cccEEEEECCCC--------cEEEEEcCCCCEEEEEECCCC-CEEEEEeCCCcEEEE
Confidence 457888999999999998876 589999999876 244455556678999999965 589999999999999
Q ss_pred ECCCCcEEEEE
Q 004998 685 QVLHLIYFSAL 695 (720)
Q Consensus 685 Dv~tg~~~~~v 695 (720)
|+.+++.+.++
T Consensus 307 D~~t~~~v~~i 317 (337)
T d1pbyb_ 307 DAETLEKKGQV 317 (337)
T ss_dssp ETTTCCEEEEE
T ss_pred ECCCCcEEEEE
Confidence 99999999875
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=98.24 E-value=1e-06 Score=89.00 Aligned_cols=81 Identities=4% Similarity=-0.105 Sum_probs=66.0
Q ss_pred CCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004998 605 NSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lW 684 (720)
.+...+.++.+++++.+++.++ ++.|++||..+. ..+........+.+|+|+|++ .+|++++.|++|+||
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~-~~~v~v~d~~~~--------~~~~~~~~~~~~~~va~s~DG-~~l~v~~~d~~v~v~ 318 (346)
T d1jmxb_ 249 DLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQR--------KLIKAANLDHTYYCVAFDKKG-DKLYLGGTFNDLAVF 318 (346)
T ss_dssp ECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTT--------EEEEEEECSSCCCEEEECSSS-SCEEEESBSSEEEEE
T ss_pred cccceeEEEEEeCCCCEEEEec-CCeEEEEECCCC--------cEEEEEcCCCCEEEEEEcCCC-CEEEEEeCCCcEEEE
Confidence 3467889999999999888776 457999998776 234444445579999999975 588999999999999
Q ss_pred ECCCCcEEEEE
Q 004998 685 QVLHLIYFSAL 695 (720)
Q Consensus 685 Dv~tg~~~~~v 695 (720)
|+.|++.+.++
T Consensus 319 D~~t~~~i~~i 329 (346)
T d1jmxb_ 319 NPDTLEKVKNI 329 (346)
T ss_dssp ETTTTEEEEEE
T ss_pred ECccCCEEEEE
Confidence 99999999874
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.10 E-value=2.5e-06 Score=91.74 Aligned_cols=114 Identities=10% Similarity=0.097 Sum_probs=84.3
Q ss_pred eEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeC---------CCcEEEeeCCcccccccccccceEEecCCCCEEEE
Q 004998 592 LRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGV---------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSI 662 (720)
Q Consensus 592 ~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v 662 (720)
.+....+....+..|...|.++.|||||++||.++. ++.+.|||+.+..... ...+...+..+
T Consensus 46 ~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l~d~~~~~~~~--------l~~~~~~~~~~ 117 (470)
T d2bgra1 46 GNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT--------EERIPNNTQWV 117 (470)
T ss_dssp CCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC--------SSCCCTTEEEE
T ss_pred CCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEEEECCCCcccc--------cccCCcccccc
Confidence 333333444466677788999999999999998854 4677899988762111 11235679999
Q ss_pred EEecCCCCEEEEEeCCCcEEEEECCCCcEEEE-------------------------EEEEeecCCceEEEecCccce
Q 004998 663 CWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA-------------------------LYCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 663 ~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~-------------------------v~~v~~~~~~~~~~~~~~~~~ 715 (720)
.|||++ +.||.. .|+.+.+|++.+|+.++. ...+.|||+|..+++.++|+-
T Consensus 118 ~~SPDG-~~ia~~-~~~~l~~~~~~~g~~~~~t~~~~~~~~~~g~~d~~~~~~~~~~~~~~~wSPDGk~ia~~~~d~~ 193 (470)
T d2bgra1 118 TWSPVG-HKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDT 193 (470)
T ss_dssp EECSST-TCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECT
T ss_pred ccccCc-ceeeEe-ecccceEEECCCCceeeeeeccCCCcccccccceeeeeeecCCccccEECCCCCccceeEecCC
Confidence 999975 578875 478999999999987753 123569999999999988753
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=97.97 E-value=3.8e-06 Score=84.53 Aligned_cols=88 Identities=9% Similarity=-0.052 Sum_probs=63.8
Q ss_pred EEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE------
Q 004998 621 LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA------ 694 (720)
Q Consensus 621 ~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~------ 694 (720)
.+++++.|++|+|||+.... ....+..+.+.+.+.+|+|+|+++.+++++..|++|++|++.++....+
T Consensus 6 v~v~~~~~~~I~v~~~~~~~-----~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~ 80 (333)
T d1ri6a_ 6 VYIASPESQQIHVWNLNHEG-----ALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESA 80 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTS-----CEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEE
T ss_pred EEEECCCCCcEEEEEEcCCC-----CeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecc
Confidence 36788899999999986431 1123445566788999999997653336666799999999986643322
Q ss_pred ----EEEEeecCCceEEEecCcc
Q 004998 695 ----LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 695 ----v~~v~~~~~~~~~~~~~~~ 713 (720)
...++|+|++..+..+.++
T Consensus 81 ~~~~p~~l~~spDg~~l~v~~~~ 103 (333)
T d1ri6a_ 81 LPGSLTHISTDHQGQFVFVGSYN 103 (333)
T ss_dssp CSSCCSEEEECTTSSEEEEEETT
T ss_pred cCCCceEEEEcCCCCEEeecccC
Confidence 4578999999988777654
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.96 E-value=5.5e-06 Score=84.38 Aligned_cols=88 Identities=9% Similarity=-0.010 Sum_probs=64.6
Q ss_pred EEEEECCCCCEEEEeeCC----------CcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCC-EEEEEeCCC
Q 004998 611 CSLSFDRDGELFAAAGVN----------KKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS-QIASSNFEG 679 (720)
Q Consensus 611 ~sv~f~~dg~~lat~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~-~laS~s~D~ 679 (720)
..+++++||.+++.++.+ .+|.+||..+. ..+..+.....+.+++|+|+++. ++++++.|+
T Consensus 252 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~v~d~~t~--------~~~~~~~~~~~~~~~a~spDG~~~l~v~~~~d~ 323 (355)
T d2bbkh_ 252 QQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG--------ERLAKFEMGHEIDSINVSQDEKPLLYALSTGDK 323 (355)
T ss_dssp SCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTC--------CEEEEEEEEEEECEEEECCSSSCEEEEEETTTT
T ss_pred EEEEEeCCCCeEEEEeccCCceeecCCCCeEEEEeCCCC--------cEEEEecCCCCEEEEEEcCCCCeEEEEEECCCC
Confidence 458899999986655443 47999998776 23444444456899999998765 467888899
Q ss_pred cEEEEECCCCcEEEEEEEEeecCCceE
Q 004998 680 VVQVGQVLHLIYFSALYCIVLNKLLII 706 (720)
Q Consensus 680 ~v~lWDv~tg~~~~~v~~v~~~~~~~~ 706 (720)
+|.|||+.||+.+++|..+.-.|..+.
T Consensus 324 ~i~v~D~~tg~~~~~i~~~G~~p~~i~ 350 (355)
T d2bbkh_ 324 TLYIHDAESGEELRSVNQLGHGPQVIT 350 (355)
T ss_dssp EEEEEETTTCCEEEEECCCCSSCCEEE
T ss_pred EEEEEECCCCCEEEEEeCcCCCccEEE
Confidence 999999999999998755444444433
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=97.88 E-value=2.7e-05 Score=79.81 Aligned_cols=85 Identities=6% Similarity=-0.115 Sum_probs=65.3
Q ss_pred CCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCE-EEEEeCCCcEEEEECCCCcEEEE
Q 004998 616 DRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ-IASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 616 ~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~-laS~s~D~~v~lWDv~tg~~~~~ 694 (720)
..++..++++..+++|.+||..+. .++..+.+...+.+++|+|+++.. +++++.|++|+|||+.||+.+.+
T Consensus 285 ~~~~~~~~~~~~~~~v~~~d~~t~--------~~~~~~~~~~~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~ 356 (373)
T d2madh_ 285 TSEQSAWKLHAAAKEVTSVTGLVG--------QTSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred cCCCceEEeecCCCeEEEEECCCC--------cEEEEecCCCCeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEE
Confidence 334444566777889999998776 355666667789999999987653 57889999999999999999998
Q ss_pred EEEEeecCCceEEE
Q 004998 695 LYCIVLNKLLIIFR 708 (720)
Q Consensus 695 v~~v~~~~~~~~~~ 708 (720)
+..+...|....+.
T Consensus 357 ~~~~g~~P~~l~~~ 370 (373)
T d2madh_ 357 TVELGSGPQVLSVM 370 (373)
T ss_pred ECCCCCCCcEEEEe
Confidence 76666666665554
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=97.75 E-value=4.5e-05 Score=78.15 Aligned_cols=98 Identities=8% Similarity=-0.061 Sum_probs=68.0
Q ss_pred CCCCCeEEEEECCCCCEEEEe-----eCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEe---
Q 004998 605 NSSNLVCSLSFDRDGELFAAA-----GVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSN--- 676 (720)
Q Consensus 605 ~~~~~V~sv~f~~dg~~lat~-----~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s--- 676 (720)
.+.+.+.+++|+|||+.++.. +.+.+|.|||..++ ..+..+.. .....++|+|+++ +|+.++
T Consensus 18 ~~~~p~~~~a~spdg~~~~~~~~~~~~~~~~v~v~D~~tg--------~~~~~~~~-~~~~~~a~SpDG~-~l~va~~~~ 87 (373)
T d2madh_ 18 AADGPTNDEAPGADGRRSYINLPAHHSAIIQQWVLDAGSG--------SILGHVNG-GFLPNPVAAHSGS-EFALASTSF 87 (373)
T ss_pred cCCCCccccccCCCCCEEEEEcccccCCCceEEEEECCCC--------CEEEEEeC-CCCccEEEcCCCC-EEEEEeecC
Confidence 356889999999999986543 34567999998776 23444432 2234799999654 777664
Q ss_pred -------CCCcEEEEECCCCcEEEEE--------------EEEeecCCceEEEecCc
Q 004998 677 -------FEGVVQVGQVLHLIYFSAL--------------YCIVLNKLLIIFRYGMF 712 (720)
Q Consensus 677 -------~D~~v~lWDv~tg~~~~~v--------------~~v~~~~~~~~~~~~~~ 712 (720)
.|++|+|||+.+++.+..+ ..+.|++.+..+...++
T Consensus 88 ~~~~~~~~~~~v~v~D~~t~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~ 144 (373)
T d2madh_ 88 SRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQF 144 (373)
T ss_pred CcccccccceEEEEEECCCCcEEEEEecCCcceeEeccCCCcEEEEeCCCcEEEEEE
Confidence 4688999999999988762 34566677665544443
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.52 E-value=0.00011 Score=75.73 Aligned_cols=91 Identities=10% Similarity=-0.070 Sum_probs=61.6
Q ss_pred ccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEec----
Q 004998 589 FSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMA---- 654 (720)
Q Consensus 589 ~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~---- 654 (720)
-.+.++++.+..+ . ...++|+|||++|+.++ .|++|++||..+.. ++..+.
T Consensus 53 ~~~~~~~~~~~~~-----~--~~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~D~~t~~--------~~~~i~~p~~ 117 (368)
T d1mdah_ 53 AGCGVTLGHSLGA-----F--LSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL--------PIADIELPDA 117 (368)
T ss_dssp TTTTEEEEEEEEC-----T--TCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC--------EEEEEEETTS
T ss_pred CCCCcEEEEEeCC-----C--CCcceECCCCCEEEEEcccCccccccccCCeEEEEECCCCc--------EeeeecCCcc
Confidence 3556666666521 1 23589999999988764 47889999988762 222211
Q ss_pred ----CCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCCCcEEEE
Q 004998 655 ----SRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 655 ----~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~tg~~~~~ 694 (720)
....-..++|+|+++.++++...+++|.+||+.+++.+.+
T Consensus 118 ~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~ 161 (368)
T d1mdah_ 118 PRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQL 161 (368)
T ss_dssp CSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEE
T ss_pred ceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEE
Confidence 1112346899998765444444689999999999998876
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.22 E-value=0.0002 Score=73.61 Aligned_cols=87 Identities=8% Similarity=-0.110 Sum_probs=60.3
Q ss_pred EEEEECCCCCEEEEeeC---------CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCE-EEEEeCCCc
Q 004998 611 CSLSFDRDGELFAAAGV---------NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQ-IASSNFEGV 680 (720)
Q Consensus 611 ~sv~f~~dg~~lat~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~-laS~s~D~~ 680 (720)
..+++++++..+..+.. ..+|.+||..+.. ++..+.....+.+++|+|+++.+ ++++..|++
T Consensus 267 ~~~a~~~~~~~~~v~~~~~~~~~~~~~~~v~v~D~~t~~--------~~~~~~~~~~~~~~a~spDG~~~ly~s~~~~~~ 338 (368)
T d1mdah_ 267 QMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ--------TSGPISNGHDSDAIIAAQDGASDNYANSAGTEV 338 (368)
T ss_dssp SCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC--------EEECCEEEEEECEEEECCSSSCEEEEEETTTTE
T ss_pred eeEEEcCCCCEEEEEecCCCceeecCCceEEEEECCCCc--------EeEEecCCCceeEEEECCCCCEEEEEEeCCCCe
Confidence 35788999886543322 2469999988762 33333334468899999987664 578888999
Q ss_pred EEEEECCCCcEEEEEEEEeecCCceE
Q 004998 681 VQVGQVLHLIYFSALYCIVLNKLLII 706 (720)
Q Consensus 681 v~lWDv~tg~~~~~v~~v~~~~~~~~ 706 (720)
|.|||+.||+.+.+|. +.-.|.+..
T Consensus 339 v~v~D~~tgk~~~~i~-~g~~P~~l~ 363 (368)
T d1mdah_ 339 LDIYDAASDQDQSSVE-LDKGPESLS 363 (368)
T ss_dssp EEEEESSSCEEEEECC-CCSCCCEEE
T ss_pred EEEEECCCCCEEEEEE-CCCCCCEEE
Confidence 9999999999998853 334444443
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.22 E-value=0.00025 Score=75.50 Aligned_cols=93 Identities=10% Similarity=0.027 Sum_probs=68.0
Q ss_pred EEEECCCCCEEEEeeCCCcEEEeeCCcccccc-cccccceEEe-cCCCCEEEEEEecCCCCEEEEEe---------CCCc
Q 004998 612 SLSFDRDGELFAAAGVNKKIKVFECDAIINEN-RDIHYPVVEM-ASRSKLSSICWNSYIKSQIASSN---------FEGV 680 (720)
Q Consensus 612 sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~-~~~~~i~~v~~~~~~~~~laS~s---------~D~~ 680 (720)
++.|.+|++++... |+.|.+||..++.... .+.+ .+ .+...|.++.|||++ .+||.++ +++.
T Consensus 21 ~~~W~~d~~~~~~~--~~~~~~~~~~t~~~~~~~~~~----~~~~~~~~i~~~~~SpDg-~~i~~~~~~~~~~r~s~~~~ 93 (470)
T d2bgra1 21 SLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENS----TFDEFGHSINDYSISPDG-QFILLEYNYVKQWRHSYTAS 93 (470)
T ss_dssp CCEECSSSEEEEES--SSCEEEEETTTCCEEEEECTT----TTTTSSSCCCEEEECTTS-SEEEEEEEEEECSSSCEEEE
T ss_pred CCEeCCCCEEEEEc--CCcEEEEECCCCCEEEEEchh----hhhhccCccceeEECCCC-CEEEEEECCcceeeeccCce
Confidence 57799999998764 7889999998873211 0000 11 123569999999975 5777763 4678
Q ss_pred EEEEECCCCcEEEE------EEEEeecCCceEEEecC
Q 004998 681 VQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGM 711 (720)
Q Consensus 681 v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~ 711 (720)
+.|||+.+|+.... +..+.|||+|..+++..
T Consensus 94 ~~l~d~~~~~~~~l~~~~~~~~~~~~SPDG~~ia~~~ 130 (470)
T d2bgra1 94 YDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW 130 (470)
T ss_dssp EEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE
T ss_pred EEEEECCCCcccccccCCccccccccccCcceeeEee
Confidence 89999999985432 88999999999999854
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=97.21 E-value=0.0003 Score=70.97 Aligned_cols=90 Identities=13% Similarity=0.075 Sum_probs=61.3
Q ss_pred ccceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEee----------CCCcEEEeeCCcccccccccccceEEec----
Q 004998 589 FSKLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAG----------VNKKIKVFECDAIINENRDIHYPVVEMA---- 654 (720)
Q Consensus 589 ~~~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~----------~d~~i~iwd~~~~~~~~~~~~~~~~~~~---- 654 (720)
-.+.++++++.- +.+..++|+|||++|+.++ .|++|+|||..+.. ++..+.
T Consensus 35 ~~tg~~~~~~~~-------g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~t~~--------~~~~~~~~~~ 99 (355)
T d2bbkh_ 35 GEAGRVIGMIDG-------GFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL--------PTADIELPDA 99 (355)
T ss_dssp TTTTEEEEEEEE-------CSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--------EEEEEEETTC
T ss_pred CCCCcEEEEEEC-------CCCCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECCCCC--------EEEEEecCCc
Confidence 345677777753 2334799999999887653 47899999998762 121111
Q ss_pred ----CCCCEEEEEEecCCCCEEEEE--eCCCcEEEEECCCCcEEEE
Q 004998 655 ----SRSKLSSICWNSYIKSQIASS--NFEGVVQVGQVLHLIYFSA 694 (720)
Q Consensus 655 ----~~~~i~~v~~~~~~~~~laS~--s~D~~v~lWDv~tg~~~~~ 694 (720)
.......++|+|+++ +++.+ +.+..+.+||..+++.+.+
T Consensus 100 ~~~~~~~~~~~~~~s~dg~-~~~v~~~~~~~~~~~~~~~~~~~~~~ 144 (355)
T d2bbkh_ 100 PRFLVGTYPWMTSLTPDGK-TLLFYQFSPAPAVGVVDLEGKAFKRM 144 (355)
T ss_dssp CCCCBSCCGGGEEECTTSS-EEEEEECSSSCEEEEEETTTTEEEEE
T ss_pred ceeecCCCCceEEEecCCC-eeEEecCCCCceeeeeecCCCcEeeE
Confidence 112235689999765 54444 4578999999999998876
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=96.96 E-value=0.0045 Score=61.60 Aligned_cols=108 Identities=12% Similarity=0.103 Sum_probs=78.6
Q ss_pred ceEEeeeeccCCCCCCCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCC
Q 004998 591 KLRVKADLNQGDLLNSSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS 670 (720)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~ 670 (720)
..++++++.. ..++.+|+++|||++++|...+++|..||...... ........+.+++|+|++ +
T Consensus 17 ~~~v~~~~p~------~~~~e~iAv~pdG~l~vt~~~~~~I~~i~p~g~~~---------~~~~~~~~~~gla~~~dG-~ 80 (302)
T d2p4oa1 17 PAKIITSFPV------NTFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ---------IHATVEGKVSGLAFTSNG-D 80 (302)
T ss_dssp CEEEEEEECT------TCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEE---------EEEECSSEEEEEEECTTS-C
T ss_pred cccEEEECCC------CCCcCCEEECCCCCEEEEeCCCCEEEEEeCCCCEE---------EEEcCCCCcceEEEcCCC-C
Confidence 3577888864 35899999999999999999999999998543311 112234678999999965 5
Q ss_pred EEEEEeCCCcEEEEECCCCc--E--EEE------EEEEeecCCceEEEecCccc
Q 004998 671 QIASSNFEGVVQVGQVLHLI--Y--FSA------LYCIVLNKLLIIFRYGMFQE 714 (720)
Q Consensus 671 ~laS~s~D~~v~lWDv~tg~--~--~~~------v~~v~~~~~~~~~~~~~~~~ 714 (720)
++++...++.+.+|+..+.. . +.. .+.+++.+.+.++...+.+.
T Consensus 81 l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~ 134 (302)
T d2p4oa1 81 LVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRG 134 (302)
T ss_dssp EEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTT
T ss_pred eEEEecCCceEEEEEecccccceeeccccCCccccceeEEccCCCEEeeccccc
Confidence 88887778888888764332 1 111 67788999999888766543
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=95.84 E-value=0.0018 Score=68.44 Aligned_cols=100 Identities=11% Similarity=0.037 Sum_probs=65.2
Q ss_pred eEEEEECCCCCE-EEEeeCCCcEEEeeCCccccc---ccccccceE-EecCCCCEEEEEEecCCCCEEEEEeCCCcEEEE
Q 004998 610 VCSLSFDRDGEL-FAAAGVNKKIKVFECDAIINE---NRDIHYPVV-EMASRSKLSSICWNSYIKSQIASSNFEGVVQVG 684 (720)
Q Consensus 610 V~sv~f~~dg~~-lat~~~d~~i~iwd~~~~~~~---~~~~~~~~~-~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lW 684 (720)
...|+++|||+| ++++..|.+|.|||+++.... ..+....+. +....-...-.+|.+. ++.++|...|..|..|
T Consensus 260 PhGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgplh~~fd~~-g~~yts~~~ds~v~kw 338 (441)
T d1qnia2 260 PHGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGR-GNAYTTLFIDSQVCKW 338 (441)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEEEEEECSS-SEEEEEETTTTEEEEE
T ss_pred ccCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcccceecCC-ceEEEcccccceEEEe
Confidence 466899999997 588899999999998874211 111101111 1111111344589985 5678888899999999
Q ss_pred ECC---------CCcEE-------------EEEEEEeecCCceEEEec
Q 004998 685 QVL---------HLIYF-------------SALYCIVLNKLLIIFRYG 710 (720)
Q Consensus 685 Dv~---------tg~~~-------------~~v~~v~~~~~~~~~~~~ 710 (720)
++. +...+ .++.++.|+|+|.+++++
T Consensus 339 ~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~ 386 (441)
T d1qnia2 339 NIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVL 386 (441)
T ss_dssp EHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEE
T ss_pred ccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEec
Confidence 973 11112 125567889999999988
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=95.65 E-value=0.0042 Score=60.29 Aligned_cols=27 Identities=11% Similarity=0.096 Sum_probs=23.6
Q ss_pred ceeccCCCCcEEEccCCceEEeccCcc
Q 004998 142 IVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 142 IvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
++|+|+.|.|||+++++.+-++||+.+
T Consensus 185 l~HgD~~~~Nil~~~~~~~~lIDwe~a 211 (263)
T d1j7la_ 185 FSHGDLGDSNIFVKDGKVSGFIDLGRS 211 (263)
T ss_dssp EECSCCCTTSEEEETTEEEEECCCTTC
T ss_pred EEEeeccCcceeecCCceEEEeechhc
Confidence 789999999999987665679999877
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=94.87 E-value=0.071 Score=54.20 Aligned_cols=82 Identities=9% Similarity=-0.083 Sum_probs=53.2
Q ss_pred CCCeEEEEECCCCCEEEEeeC-CCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 607 SNLVCSLSFDRDGELFAAAGV-NKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
...+.+++|+|||+++.+++. ..+|.+|++...- ......++......+....++|+|+++...++.-.+++|.+||
T Consensus 144 ~~h~h~v~~sPdG~~l~v~d~g~d~v~~~~~~~~g--~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~ 221 (365)
T d1jofa_ 144 NTGIHGMVFDPTETYLYSADLTANKLWTHRKLASG--EVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYV 221 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS--CEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCcceEEEECCCCCEEEEeeCCCCEEEEEEccCCC--ceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEE
Confidence 446899999999997666543 5688888764321 0000001111122456789999997764456666799999999
Q ss_pred CCCCc
Q 004998 686 VLHLI 690 (720)
Q Consensus 686 v~tg~ 690 (720)
+.+++
T Consensus 222 ~~~~~ 226 (365)
T d1jofa_ 222 IDPAT 226 (365)
T ss_dssp ECTTT
T ss_pred ecCCC
Confidence 87664
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=93.72 E-value=0.26 Score=46.34 Aligned_cols=91 Identities=10% Similarity=-0.033 Sum_probs=57.0
Q ss_pred CCCCCCeEEEEECCCCCEEEEeeCC-CcEEEe--eCCcccccccccccceEEecCCCCEEEEEEecCCCCEEE-EEeC--
Q 004998 604 LNSSNLVCSLSFDRDGELFAAAGVN-KKIKVF--ECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA-SSNF-- 677 (720)
Q Consensus 604 ~~~~~~V~sv~f~~dg~~lat~~~d-~~i~iw--d~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~la-S~s~-- 677 (720)
..+........|+|||+.++..+.+ +...|| |.... ......+.......+|+|+++ .|| ++..
T Consensus 167 ~~~~~~~~~~~~spdg~~~~~~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~p~~SPDG~-~i~f~s~~~~ 236 (269)
T d2hqsa1 167 TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG---------GVQVLSSTFLDETPSLAPNGT-MVIYSSSQGM 236 (269)
T ss_dssp CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC---------CEEECCCSSSCEEEEECTTSS-EEEEEEEETT
T ss_pred ecccccccccccccccceeEEEeecCCceeeeEeecccc---------cceEeecCccccceEECCCCC-EEEEEEcCCC
Confidence 3445566778999999987766554 444444 43322 122223345567889999765 555 4332
Q ss_pred CCcEEEEECCCCcEEEE------EEEEeecCCc
Q 004998 678 EGVVQVGQVLHLIYFSA------LYCIVLNKLL 704 (720)
Q Consensus 678 D~~v~lWDv~tg~~~~~------v~~v~~~~~~ 704 (720)
...+.+||+..+...+- +...+|||.+
T Consensus 237 ~~~l~~~~~dg~~~~~lt~~~g~~~~p~WSP~~ 269 (269)
T d2hqsa1 237 GSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL 269 (269)
T ss_dssp EEEEEEEETTSCCEEECCCSSSEEEEEEECCCC
T ss_pred CcEEEEEECCCCCEEEEeCCCCcEEeEEeCCCC
Confidence 34678899988765442 6678898863
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=92.95 E-value=0.077 Score=55.53 Aligned_cols=100 Identities=6% Similarity=-0.054 Sum_probs=70.1
Q ss_pred CCeEEEEECCCCCEE-EEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCC-EEEEEeCCC------
Q 004998 608 NLVCSLSFDRDGELF-AAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKS-QIASSNFEG------ 679 (720)
Q Consensus 608 ~~V~sv~f~~dg~~l-at~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~-~laS~s~D~------ 679 (720)
-.++...++|||++| ++...+.+|.+||+.+... ..+.++.+......++|+|+++. ++++.+.+.
T Consensus 72 P~~s~t~gtpDGr~lfV~d~~~~rVavIDl~t~k~------~~ii~iP~g~gphgi~~spdg~t~YV~~~~~~~v~~~~d 145 (441)
T d1qnia2 72 PHISMTDGRYDGKYLFINDKANTRVARIRLDIMKT------DKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPND 145 (441)
T ss_dssp CEEEEETTEEEEEEEEEEETTTTEEEEEETTTTEE------EEEEECTTCCCEEEEEECCSSBCCEEEEEECSCEESSCS
T ss_pred CCcceecccCCCCEEEEEcCCCCEEEEEECCCCcE------eeEEecCCCCCccceEEeccCCEEEEEeccCCcccccCc
Confidence 456777789999975 7777899999999987621 01224445567899999997654 444444322
Q ss_pred -----------cEEEEECCCCcEEEE------EEEEeecCCceEEEecCcc
Q 004998 680 -----------VVQVGQVLHLIYFSA------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 680 -----------~v~lWDv~tg~~~~~------v~~v~~~~~~~~~~~~~~~ 713 (720)
++..+|..+.+...+ ...++|++.+......++.
T Consensus 146 g~~~~~~~~~~~~~~iD~~t~~v~~qI~v~~~p~~v~~spdGk~a~vt~~n 196 (441)
T d1qnia2 146 GTDFSLDNSYTMFTAIDAETMDVAWQVIVDGNLDNTDADYTGKYATSTCYN 196 (441)
T ss_dssp SSCCCGGGEEEEEEEEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESC
T ss_pred ccccccccccceEEeecCccceeeEEEecCCCccceEECCCCCEEEEEecC
Confidence 246699999888766 4578999999877665543
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=92.74 E-value=0.86 Score=44.09 Aligned_cols=80 Identities=16% Similarity=0.146 Sum_probs=59.9
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv 686 (720)
.+.+.+++|++||.++++...+..+.+|+...... ...++.........+.+++.++ ++++++.+.++.|..+|.
T Consensus 67 ~~~~~gla~~~dG~l~v~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~n~i~~~~~-g~~~v~~~~~~~i~~~~~ 141 (302)
T d2p4oa1 67 EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDG----TVETLLTLPDAIFLNGITPLSD-TQYLTADSYRGAIWLIDV 141 (302)
T ss_dssp SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTS----CEEEEEECTTCSCEEEEEESSS-SEEEEEETTTTEEEEEET
T ss_pred CCCcceEEEcCCCCeEEEecCCceEEEEEeccccc----ceeeccccCCccccceeEEccC-CCEEeeccccccceeeec
Confidence 46789999999999999988899999988654311 1123334444556889999995 568888888899988998
Q ss_pred CCCcE
Q 004998 687 LHLIY 691 (720)
Q Consensus 687 ~tg~~ 691 (720)
.++..
T Consensus 142 ~~~~~ 146 (302)
T d2p4oa1 142 VQPSG 146 (302)
T ss_dssp TTTEE
T ss_pred cCCcc
Confidence 87753
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=92.55 E-value=0.22 Score=46.94 Aligned_cols=86 Identities=5% Similarity=-0.167 Sum_probs=56.2
Q ss_pred ECCC--CCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEE-EEeCCC-----cEEEEEC
Q 004998 615 FDRD--GELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIA-SSNFEG-----VVQVGQV 686 (720)
Q Consensus 615 f~~d--g~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~la-S~s~D~-----~v~lWDv 686 (720)
.+|| |+.+|-.+ ++-|.+.|+..+ .+.....+.+.+...+|||+++ .|| ++..++ .|-+.++
T Consensus 6 ~sPdi~G~~v~f~~-~~dl~~~d~~~g--------~~~~Lt~~~~~~~~p~~SPDG~-~iaf~~~~~~~~~~~~i~~~~~ 75 (281)
T d1k32a2 6 LNPDIHGDRIIFVC-CDDLWEHDLKSG--------STRKIVSNLGVINNARFFPDGR-KIAIRVMRGSSLNTADLYFYNG 75 (281)
T ss_dssp EEEEEETTEEEEEE-TTEEEEEETTTC--------CEEEEECSSSEEEEEEECTTSS-EEEEEEEESTTCCEEEEEEEET
T ss_pred cCCCCCCCEEEEEe-CCcEEEEECCCC--------CEEEEecCCCcccCEEECCCCC-EEEEEEeeCCCCCceEEEEEEe
Confidence 4788 99877654 445777787665 1222223456789999999765 666 333232 3666688
Q ss_pred CCCcEEEE-------------EEEEeecCCceEEEec
Q 004998 687 LHLIYFSA-------------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 687 ~tg~~~~~-------------v~~v~~~~~~~~~~~~ 710 (720)
.+|+..+- ...++|++.+..+.+.
T Consensus 76 ~~g~~~~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~ 112 (281)
T d1k32a2 76 ENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIIST 112 (281)
T ss_dssp TTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEE
T ss_pred cCCceEEeeecCCCccCccccccccccCCCCCEEEEE
Confidence 88876542 3577899999888764
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=92.39 E-value=0.63 Score=44.56 Aligned_cols=94 Identities=12% Similarity=0.057 Sum_probs=68.4
Q ss_pred CCCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC---CCCEEEEEEecCCCCEEEEEeC-CCcE
Q 004998 606 SSNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS---RSKLSSICWNSYIKSQIASSNF-EGVV 681 (720)
Q Consensus 606 ~~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~i~~v~~~~~~~~~laS~s~-D~~v 681 (720)
+......++++++|.++++....++|++||.... .+.++.. -.....|++.|++ +++++-.+ ++.|
T Consensus 155 ~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~~G~---------~~~~~g~~g~~~~P~giavD~~G-~i~Vad~~~~~~v 224 (279)
T d1q7fa_ 155 HLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ---------YLRQIGGEGITNYPIGVGINSNG-EILIADNHNNFNL 224 (279)
T ss_dssp TCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC---------EEEEESCTTTSCSEEEEEECTTC-CEEEEECSSSCEE
T ss_pred cccccceeeeccceeEEeeeccccceeeeecCCc---------eeeeecccccccCCcccccccCC-eEEEEECCCCcEE
Confidence 3567889999999999999999999999996432 2223322 2236789999965 56655444 4579
Q ss_pred EEEECCCCcEEEE---------EEEEeecCCceEEEec
Q 004998 682 QVGQVLHLIYFSA---------LYCIVLNKLLIIFRYG 710 (720)
Q Consensus 682 ~lWDv~tg~~~~~---------v~~v~~~~~~~~~~~~ 710 (720)
.++| .+|+.+.+ .+.|++.+.+.+++..
T Consensus 225 ~~f~-~~G~~~~~~~~~~~~~~p~~vav~~dG~l~V~~ 261 (279)
T d1q7fa_ 225 TIFT-QDGQLISALESKVKHAQCFDVALMDDGSVVLAS 261 (279)
T ss_dssp EEEC-TTSCEEEEEEESSCCSCEEEEEEETTTEEEEEE
T ss_pred EEEC-CCCCEEEEEeCCCCCCCEeEEEEeCCCcEEEEe
Confidence 9998 46877655 5788899998888765
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=91.19 E-value=1.4 Score=41.01 Aligned_cols=71 Identities=7% Similarity=-0.046 Sum_probs=44.6
Q ss_pred CCCeEEEEECCCCCEEEEeeCCC---cEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNK---KIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
...+.+-+|||||+.||-..... .+.+.+..... ......+...+....|+|+++.++.....++...+
T Consensus 38 ~~~~~sP~wSPDGk~IAf~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~ 109 (269)
T d2hqsa1 38 PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA--------VRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNL 109 (269)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--------EEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred CCceeeeEECCCCCEEEEEEeeccCcceeeeecccCc--------eeEEeeeecccccceecCCCCeeeEeeecCCccce
Confidence 46688999999999998654433 35555544431 22233346678899999987655545544544444
Q ss_pred EE
Q 004998 684 GQ 685 (720)
Q Consensus 684 WD 685 (720)
+.
T Consensus 110 ~~ 111 (269)
T d2hqsa1 110 YV 111 (269)
T ss_dssp EE
T ss_pred ee
Confidence 43
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=90.92 E-value=0.08 Score=54.55 Aligned_cols=27 Identities=7% Similarity=0.183 Sum_probs=23.7
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcc
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
.++|+|+.|.|||++++ .++++||-.|
T Consensus 224 ~LiHGDl~~gNIlv~~~-~~~vID~E~a 250 (392)
T d2pula1 224 TLIHGDLHTGSIFASEH-ETKVIDPEFA 250 (392)
T ss_dssp EEECSCCCGGGEEECSS-CEEECCCTTC
T ss_pred ceeccCCcCCceeEcCC-ceEEechhhc
Confidence 68999999999999865 4899999776
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=89.20 E-value=0.57 Score=44.37 Aligned_cols=96 Identities=6% Similarity=0.018 Sum_probs=62.0
Q ss_pred eEEEEECCCCCE-EEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEECCC
Q 004998 610 VCSLSFDRDGEL-FAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQVLH 688 (720)
Q Consensus 610 V~sv~f~~dg~~-lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~t 688 (720)
-.+|++++||.+ +|..+..+.|..++...... ..........-..|++++++ ++.++....+.|++++-.+
T Consensus 16 P~~vavd~dG~i~v~~~~~~~~i~~~~~~~~~~-------~~~~~~~~~~p~gvav~~~g-~i~v~d~~~~~i~~~~~~~ 87 (260)
T d1rwia_ 16 PSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT-------TVLPFNGLYQPQGLAVDGAG-TVYVTDFNNRVVTLAAGSN 87 (260)
T ss_dssp EEEEEECTTCCEEEEECSSSCEEEEEC----CE-------EECCCCSCCSCCCEEECTTC-CEEEEETTTEEEEECTTCS
T ss_pred CCEEEEcCCCCEEEEEcCCCCEEEEEcCCCceE-------EEeccCCccCceEEEEcCCC-CEEEeeeeeceeeeeeecc
Confidence 479999999996 55566678888887654310 01111122334678899854 5666666677888887776
Q ss_pred CcEEEE------EEEEeecCCceEEEecCcc
Q 004998 689 LIYFSA------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 689 g~~~~~------v~~v~~~~~~~~~~~~~~~ 713 (720)
+..+.. .++|++.+.+.++..+...
T Consensus 88 ~~~~~~~~~~~~p~~iavd~~g~i~v~d~~~ 118 (260)
T d1rwia_ 88 NQTVLPFDGLNYPEGLAVDTQGAVYVADRGN 118 (260)
T ss_dssp CCEECCCCSCCSEEEEEECTTCCEEEEEGGG
T ss_pred ceeeeeeeeeeecccccccccceeEeecccc
Confidence 665543 6889999988887765443
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.02 E-value=0.31 Score=51.05 Aligned_cols=99 Identities=9% Similarity=-0.062 Sum_probs=66.3
Q ss_pred CeEEEEECCCCCEEEEee---------CCCcEEEeeCCcccccccccccceEEec-CCCCEEEEEEecCCCCEEEEEeCC
Q 004998 609 LVCSLSFDRDGELFAAAG---------VNKKIKVFECDAIINENRDIHYPVVEMA-SRSKLSSICWNSYIKSQIASSNFE 678 (720)
Q Consensus 609 ~V~sv~f~~dg~~lat~~---------~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~~~~i~~v~~~~~~~~~laS~s~D 678 (720)
.+.+..|||||++++.+. ..+.+-|||+.+.... ++.... ....+.-..|||+++ .||=.. +
T Consensus 62 ~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~~~~~------~l~~~~~~~~~l~~~~wSPDG~-~iafv~-~ 133 (465)
T d1xfda1 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQ------SLDPPEVSNAKLQYAGWGPKGQ-QLIFIF-E 133 (465)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCE------ECCCTTCCSCCCSBCCBCSSTT-CEEEEE-T
T ss_pred ccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccCCcee------eccCccCCccccceeeeccCCc-eEEEEe-c
Confidence 456788999999877653 3467788898765211 221111 144577789999765 565443 5
Q ss_pred CcEEEEECCCCcEEEE--------E-----------------EEEeecCCceEEEecCccce
Q 004998 679 GVVQVGQVLHLIYFSA--------L-----------------YCIVLNKLLIIFRYGMFQEV 715 (720)
Q Consensus 679 ~~v~lWDv~tg~~~~~--------v-----------------~~v~~~~~~~~~~~~~~~~~ 715 (720)
+-|-+.+..++..++- + ..+-|||+|..+++..+|+-
T Consensus 134 ~nl~~~~~~~~~~~~lt~~g~~~~i~nG~~d~vyeee~~~~~~a~~WSPDgk~iaf~~~D~s 195 (465)
T d1xfda1 134 NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDS 195 (465)
T ss_dssp TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECT
T ss_pred ceEEEEecCCCceEEEecccCcceeeccccchhhhhhhccccceEEECCCCCeEEEEEeccc
Confidence 6777888877766543 2 24559999999999888763
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=88.67 E-value=1.3 Score=43.31 Aligned_cols=98 Identities=8% Similarity=-0.013 Sum_probs=62.2
Q ss_pred CCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceE-EecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 608 NLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVV-EMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 608 ~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~-~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
..-+.|+|+|||+ ++++-+..++|..||+..-..........+. .......--.+++.+++ ++.++....+.|.++|
T Consensus 177 ~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G-~l~Va~~~~g~V~~~~ 255 (319)
T d2dg1a1 177 SVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDD-NLYVAMYGQGRVLVFN 255 (319)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTC-CEEEEEETTTEEEEEC
T ss_pred ceeeeeeeccccceEEEecccCCceEEEEEcCCCceeccccceeeeccCCccceeeeeEcCCC-CEEEEEcCCCEEEEEC
Confidence 4467899999998 4577788999999997542100000000011 11112224578999864 5666666689999999
Q ss_pred CCCCcEEEEE-------------EEEeecCCceEE
Q 004998 686 VLHLIYFSAL-------------YCIVLNKLLIIF 707 (720)
Q Consensus 686 v~tg~~~~~v-------------~~v~~~~~~~~~ 707 (720)
- .|+.+.+| .|++|.+....+
T Consensus 256 p-~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~~ 289 (319)
T d2dg1a1 256 K-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQL 289 (319)
T ss_dssp T-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEE
T ss_pred C-CCcEEEEEeCCCcCCCcCceeeeEEEeCCCCEE
Confidence 5 79888764 588887765433
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=87.85 E-value=0.067 Score=53.04 Aligned_cols=29 Identities=7% Similarity=0.054 Sum_probs=26.5
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCcc
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
.|+||+|+.|+||+++.+...-++||+.|
T Consensus 183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~ 211 (316)
T d2ppqa1 183 AGVIHADLFQDNVFFLGDELSGLIDFYFA 211 (316)
T ss_dssp EEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred cccccCCcchhhhhcccccceeEeccccc
Confidence 68999999999999998777789999987
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=87.78 E-value=3.4 Score=39.02 Aligned_cols=96 Identities=11% Similarity=0.057 Sum_probs=70.5
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEe---cCCCCEEEEEEecCCCCEEEEEeCCCcEEE
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEM---ASRSKLSSICWNSYIKSQIASSNFEGVVQV 683 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~~~~i~~v~~~~~~~~~laS~s~D~~v~l 683 (720)
.+...+++++++|.++++......+.++|.... .+..+ .+-.....+++.+. ++++++....+.|++
T Consensus 113 ~~~p~~~avd~~G~i~v~~~~~~~~~~~~~~g~---------~~~~~g~~~~~~~~~~i~~d~~-g~i~v~d~~~~~V~~ 182 (279)
T d1q7fa_ 113 LQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGN---------VLHKFGCSKHLEFPNGVVVNDK-QEIFISDNRAHCVKV 182 (279)
T ss_dssp CSCEEEEEECTTSCEEEEETTTTEEEEECTTSC---------EEEEEECTTTCSSEEEEEECSS-SEEEEEEGGGTEEEE
T ss_pred ccccceeccccCCcEEEEeeccceeeEeccCCc---------eeecccccccccccceeeeccc-eeEEeeeccccceee
Confidence 456789999999998888777888998885432 12222 12345788899885 467777778899999
Q ss_pred EECCCCcEEEE---------EEEEeecCCceEEEecCcc
Q 004998 684 GQVLHLIYFSA---------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 684 WDv~tg~~~~~---------v~~v~~~~~~~~~~~~~~~ 713 (720)
+|. +|+.+.+ -..|++.+.+++++.+...
T Consensus 183 ~d~-~G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~ 220 (279)
T d1q7fa_ 183 FNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHN 220 (279)
T ss_dssp EET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSS
T ss_pred eec-CCceeeeecccccccCCcccccccCCeEEEEECCC
Confidence 997 5566655 4788999999888876553
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=87.18 E-value=1.1 Score=43.93 Aligned_cols=70 Identities=20% Similarity=0.203 Sum_probs=51.1
Q ss_pred eEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcEEEEECC
Q 004998 610 VCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQVGQVL 687 (720)
Q Consensus 610 V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv~ 687 (720)
...++++.+|.++++....+.|.+||..... ++..+.. ....++|+|.|+.+.+.++.+..+.|..-|+.
T Consensus 228 pdGiavD~~GnlyVa~~~~g~I~~~dp~~g~--------~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~~ 298 (314)
T d1pjxa_ 228 ADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ--------PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EEEEEEBTTCCEEEEEETTTEEEEECTTCBS--------CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred ceeeEEecCCcEEEEEcCCCEEEEEeCCCCE--------EEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEECC
Confidence 4679999999998887788999999976541 2222222 35689999999765566777777877766653
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=86.44 E-value=0.97 Score=44.25 Aligned_cols=100 Identities=7% Similarity=-0.063 Sum_probs=64.3
Q ss_pred CeEEEEECCCCC-----EEEEeeCCCcEEEeeCCcccccccccccceEEecC--CCCEEEEEEecCCCCEEEEEeCCCcE
Q 004998 609 LVCSLSFDRDGE-----LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS--RSKLSSICWNSYIKSQIASSNFEGVV 681 (720)
Q Consensus 609 ~V~sv~f~~dg~-----~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~--~~~i~~v~~~~~~~~~laS~s~D~~v 681 (720)
.-+.|+|+||++ ++++-+..++|..||+...-. .........+.. ....-.+++.+++ ++.++....+.|
T Consensus 173 ~pNGi~~~~d~d~~~~~lyv~d~~~~~i~~~d~~~~g~--~~~~~~~~~~~~~~~~~pdGiavD~~G-nlyVa~~~~g~I 249 (314)
T d1pjxa_ 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAK--IENKKVWGHIPGTHEGGADGMDFDEDN-NLLVANWGSSHI 249 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTE--EEEEEEEEECCCCSSCEEEEEEEBTTC-CEEEEEETTTEE
T ss_pred eeeeeEECCCCCcceeEEEEEeecccceEEeeccCccc--cceeeEEEEccccccccceeeEEecCC-cEEEEEcCCCEE
Confidence 347899998875 667778889999998643200 000001112221 1234678999864 565555557889
Q ss_pred EEEECCCCcEEEE-------EEEEeecCCce-EEEecC
Q 004998 682 QVGQVLHLIYFSA-------LYCIVLNKLLI-IFRYGM 711 (720)
Q Consensus 682 ~lWDv~tg~~~~~-------v~~v~~~~~~~-~~~~~~ 711 (720)
.+||..+|+.+.+ ..+++|.+.+. ++++.+
T Consensus 250 ~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~ 287 (314)
T d1pjxa_ 250 EVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEH 287 (314)
T ss_dssp EEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred EEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEEC
Confidence 9999988876544 67899999874 666544
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=85.95 E-value=2.6 Score=39.38 Aligned_cols=99 Identities=9% Similarity=0.050 Sum_probs=68.3
Q ss_pred CCCeEEEEECCCCCEEEEeeCCCcEEEeeCCcccccccccccceEEecCCCCEEEEEEecCCCCEEEEEeCCCcEEEEEC
Q 004998 607 SNLVCSLSFDRDGELFAAAGVNKKIKVFECDAIINENRDIHYPVVEMASRSKLSSICWNSYIKSQIASSNFEGVVQVGQV 686 (720)
Q Consensus 607 ~~~V~sv~f~~dg~~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~~~laS~s~D~~v~lWDv 686 (720)
.+..++|+++++|.++++-.....+.+++...... .......-....+++++|.+ +.+++...++.|..+|.
T Consensus 97 ~~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~-------~~~~~~~~~~p~~i~~~~~g-~~~v~~~~~~~i~~~d~ 168 (260)
T d1rwia_ 97 LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ-------TVLPFTGLNDPDGVAVDNSG-NVYVTDTDNNRVVKLEA 168 (260)
T ss_dssp CCSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSC-------EECCCCSCCSCCEEEECTTC-CEEEEEGGGTEEEEECT
T ss_pred eeecccccccccceeEeecccccccccccccccee-------eeeeecccCCcceeeecCCC-CEeeecccccccccccc
Confidence 35678999999999988877778888887654311 01111222345788999854 56777677888999998
Q ss_pred CCCcEEEE-------EEEEeecCCceEEEecCcc
Q 004998 687 LHLIYFSA-------LYCIVLNKLLIIFRYGMFQ 713 (720)
Q Consensus 687 ~tg~~~~~-------v~~v~~~~~~~~~~~~~~~ 713 (720)
........ -+.|++.+.+.+++++...
T Consensus 169 ~~~~~~~~~~~~~~~p~gi~~d~~g~l~vsd~~~ 202 (260)
T d1rwia_ 169 ESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNT 202 (260)
T ss_dssp TTCCEEECCCSSCCSEEEEEECTTCCEEEEETTT
T ss_pred ccceeeeeeccccCCCccceeeeeeeeeeeecCC
Confidence 76543332 5778898888888876543
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=83.14 E-value=0.41 Score=47.41 Aligned_cols=28 Identities=4% Similarity=0.030 Sum_probs=23.1
Q ss_pred cCceeccCCCCcEEEccCCceEEeccCccc
Q 004998 140 QGIVVHNVRPSCFVMSSFNHVSFIESASCS 169 (720)
Q Consensus 140 ~gIvHrDLKP~NILl~~~~~vkliDfg~a~ 169 (720)
.++||+|+.|.|||++. + ..++||+-|.
T Consensus 192 ~~liHgDlh~~NvL~~~-~-~~~IDFdd~~ 219 (325)
T d1zyla1 192 VLRLHGDCHAGNILWRD-G-PMFVDLDDAR 219 (325)
T ss_dssp CEECCSSCSGGGEEESS-S-EEECCCTTCC
T ss_pred ceeecCCCCcccEEEeC-C-ceEEechhcc
Confidence 47899999999999963 3 4689998873
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=81.84 E-value=0.22 Score=47.08 Aligned_cols=28 Identities=7% Similarity=0.063 Sum_probs=24.4
Q ss_pred CceeccCCCCcEEEccCCceEEeccCcc
Q 004998 141 GIVVHNVRPSCFVMSSFNHVSFIESASC 168 (720)
Q Consensus 141 gIvHrDLKP~NILl~~~~~vkliDfg~a 168 (720)
.++|+|+.|.|||++.++.+-|+||+.+
T Consensus 176 ~liHgD~~~~Nvl~~~~~~~~iID~~~~ 203 (255)
T d1nd4a_ 176 VVTHGDACLPNIMVENGRFSGFIDCGRL 203 (255)
T ss_dssp EEECSSCCGGGEEEETTEEEEECCCTTC
T ss_pred eEEeCCCCCcceEEeCCceEEEEEchhc
Confidence 3799999999999987666779999877
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=81.40 E-value=7.6 Score=36.93 Aligned_cols=100 Identities=10% Similarity=0.008 Sum_probs=62.3
Q ss_pred CCeEEEEECCCCC-EEEEeeCCCcEEEeeCCcccccccccccceEEecC-CCCEEEEEEecCCCCEEEEEeCCCcEEEEE
Q 004998 608 NLVCSLSFDRDGE-LFAAAGVNKKIKVFECDAIINENRDIHYPVVEMAS-RSKLSSICWNSYIKSQIASSNFEGVVQVGQ 685 (720)
Q Consensus 608 ~~V~sv~f~~dg~-~lat~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~i~~v~~~~~~~~~laS~s~D~~v~lWD 685 (720)
..-+.++|++|++ ++.+.+..++|..|++................... ......++..+++ ++.++.-..+.|..+|
T Consensus 148 ~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~~~~~~~~~~~~~~~~~g~pdG~~vD~~G-nlWva~~~~g~V~~~d 226 (295)
T d2ghsa1 148 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDRYD 226 (295)
T ss_dssp SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEEEC
T ss_pred CCcceeeecCCCceEEEeecccceeeEeeecccccccccceEEEeccCcccccccceEEcCCC-CEEeeeeCCCceEEec
Confidence 4568899999998 46777788999999975321111110001112222 4457788998864 4544443467799999
Q ss_pred CCCCcEEEE-------EEEEeec-CC-ceEEEe
Q 004998 686 VLHLIYFSA-------LYCIVLN-KL-LIIFRY 709 (720)
Q Consensus 686 v~tg~~~~~-------v~~v~~~-~~-~~~~~~ 709 (720)
- .|+.+.. ++|++|- +. ..++++
T Consensus 227 p-~G~~~~~i~lP~~~~T~~~FGG~d~~~LyvT 258 (295)
T d2ghsa1 227 T-DGNHIARYEVPGKQTTCPAFIGPDASRLLVT 258 (295)
T ss_dssp T-TCCEEEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred C-CCcEeeEecCCCCceEEEEEeCCCCCEEEEE
Confidence 5 6887776 6889994 33 334443
|