Citrus Sinensis ID: 005050

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710------
MATTQEKTTPTCCINNSSKPSATEPVKDWKVSGSDPSLDPVRKRDSVTTLIRPVESLPDPPPPPNTISSTKGIPMMVRAQTSHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVVRVEPDKQVVALADAYFFPPFQPSLIPRTKGGPIIPTKLPPRRARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPADPLRNYTAGETRGGVDRSDIKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLWLVEILYRI
ccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccEEEEEEEcccccHHHHHHHHccccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEcccccccccccccccEEEEEEccccccccccHHHHHHHHHHHHccHHHHHHHHHccccccccEEEcEEEcccccccccccccEEEEEEEEEEccccccccccccccccEEEEEEccccEEEEEEEccccccccccccccccccccccccccccccccEEEcccccEEEEccEEEEEccEEEEEEEcccccEEEEEEEEEccccccccEEEEEccEEEEEEccccccccccEEEEEccccccccccccccccccccccEEEEEEEEEcccccEEEEEcEEEEccccccccEEEEEcccccEEEEEEEEEEEEEEEEEccccEEEEEEEEEcccEEEEEEEEEEEEEEEcccccccccccEEccccccccEEEEEEEEEEcccccccccccEEEEEEEcccccccccccccEEEEEEEEEEccHHHHccccccccccEEEEEcccccccccccEEEEEEcccccccccccccHHHHHHccccccEEEEEccccccccccccccccccccccHHHHHHcccccccccEEEEEEcccccc
cccHcccccccccccccccccccHHHHccccccccccccccccHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccEEEEEEEEccccHHHHHHHHHcccccccccccccccccccccccccccEEEEEEEEcccccEEEEEEEEccEEEEEcccccccEEEEEEEcccccccccHHHHHHHHHHHHccHHHHHHHHHcccccccEEEEccccccccccccccccEEEEEEEEEEcccccccccccccccccEEEEEEccccEEEEEEcccccccccccccccccccccccccccccccccEEEcccccccEEEccEEEEccEEEEEEEEcccEEEEEEEEEEEcccccEEEEEEEEEEEEEEEEccccccccccEEEccccccccccEccccEcccEccccEEEccEEEcccccEEEccccEEEEEEEEEEEEEEEccccccEEEEEEEEEEEEEEEEEccEEEEEEEEEEccccEEEEEEEEEccccEEccccccccccEEEEccEEEEcEEEEEEEEEEEccccccccccEEEEEEEEEEcccEccEcccccEEEEEEEEcEHHHcEEcccHHHccEEEEEEEEEEcccccEEEEEEEEccccccccccccHHHHHcHHHHccEEEEEcccccccccccccccccccccccHHHHHcccccccccEEEEEEEcEccc
mattqekttptccinnsskpsatepvkdwkvsgsdpsldpvrkrdsvttlirpveslpdpppppntisstkgipmmvraqtshpldplsAAEISVAVATVRaagatpevrdsMRFVEVVRVEPDKQVVALAdayffppfqpsliprtkggpiiptklpprraRLVVYNKRSNETSIWVVELSEVhaatrgghhrgkvisskvvpdvqppmdavEYAECeavvkdfppfREAMKKRgiedmdlvmvdpwcvgyhsdadapsrrlakplifcrtesdcpiengyarpvegIHVLVDMQNMVViefedrklvhlppadplrnytagetrggvdrsdikplqivqpegpsfrvnghfvewqkwnfrigftpregLIIYSVAYvdgsrgrrpvahrLSFVEMVvpygdpndphyrknafdagedglgknahslKKGCDCLGYIKYFDAhftnfaggvdtiencvclheedhgilwkhqdwrtGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILslgalqpgevrkygtiiapglyapvhQHFFVARMdmavdckpgeahnQVVEMNVKveepgknnvhnnafYAEEELLKSELQAMrdcnpltarhWIIRntrtvnrtgqltgyklvpgsnclplagSEAKVLRRAAFLKHnlwvtpyahdemypggefpnqnprvgEGLATWVEQNRSLEETDIVLWLVEILYRI
mattqekttptccinnsskpsatepvkdwkvsgsdpsldpvrkrdsVTTLirpveslpdpppppnTISSTKGIPMMVRAQTSHPLDPLSAAEISVAVATVRaagatpevrdsmrfVEVVRVEPDKQVVALADAYFFPpfqpsliprtkggpiiptklpprraRLVVynkrsnetsiWVVELSEVHaatrgghhrgkvisskvvpdvqPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDrklvhlppadplrnytagetrggvdrsdikPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEAHNQVVEMNVKveepgknnvHNNAFYAEEELLKSELQAMRDCNPLtarhwiirntrtvnrtgqltgyklvpgsnCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVeqnrsleetdivlWLVEILYRI
MATTQEKTTPTCCINNSSKPSATEPVKDWKVSGSDPSLDPVRKRDSVTTLIRPVESLpdpppppNTISSTKGIPMMVRAQTSHPLDPLSAAEISvavatvraagatPEVRDSMRFVEVVRVEPDKQVVALADAYFFPPFQPSLIPRTKGGPIIPTKLPPRRARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPADPLRNYTAGETRGGVDRSDIKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLWLVEILYRI
*******************************************************************************************EISVAVATVRAAGATPEVRDSMRFVEVVRVEPDKQVVALADAYFFPPFQPSLIPRTKGGPIIPTKLPPRRARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPADPLRNYT************IKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDP****YR**AF*****GLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEAHNQVVEMNVKV******NVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPN*NPRVGEGLATWVEQNRSLEETDIVLWLVEILY**
**********************************************************************************HPLDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVVRVEPDKQVVALADAYFFPPFQPSLIPR*******PTKLPPRRARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPADPLRN*********************QPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLWLVEILYRI
**********TCCINNS****************************SVTTLIRPVESLPDPPPPPNTISSTKGIPMMVRAQTSHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVVRVEPDKQVVALADAYFFPPFQPSLIPRTKGGPIIPTKLPPRRARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPADPLRNYTAGETRGGVDRSDIKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLWLVEILYRI
*****************************************************************************R*QTSHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVVRVEPDKQVVALADAYFFPPFQPSL*PRTKGGPIIPTKLPPRRARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPADPLRNYTAGETRGGVDRSDIKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLWLVEILYRI
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MATTQEKTTPTCCINNSSKPSATEPVKDWKVSGSDPSLDPVRKRDSVTTLIRPVESLPDPPPPPNTISSTKGIPMMVRAQTSHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVVRVEPDKQVVALADAYFFPPFQPSLIPRTKGGPIIPTKLPPRRARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPADPLRNYTAGETRGGVDRSDIKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLWLVEILYRI
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query716 2.2.26 [Sep-21-2011]
Q07121648 Primary amine oxidase OS= N/A no 0.797 0.881 0.405 1e-122
Q07123648 Copper methylamine oxidas N/A no 0.797 0.881 0.405 1e-122
Q59118684 Histamine oxidase OS=Arth N/A no 0.840 0.880 0.362 1e-102
P46881638 Phenylethylamine oxidase N/A no 0.649 0.728 0.402 4e-92
Q9P7F2712 Copper amine oxidase 1 OS yes no 0.695 0.699 0.355 2e-83
P12807692 Peroxisomal primary amine N/A no 0.807 0.835 0.326 4e-82
Q12556671 Copper amine oxidase 1 OS no no 0.814 0.868 0.338 3e-72
O42890 794 Copper amine oxidase-like no no 0.810 0.730 0.293 2e-66
P49250755 Primary amine oxidase OS= yes no 0.794 0.753 0.286 8e-60
P80695752 Primary amine oxidase OS= yes no 0.798 0.760 0.284 2e-58
>sp|Q07121|AMO1_ARTS1 Primary amine oxidase OS=Arthrobacter sp. (strain P1) GN=maoI PE=1 SV=1 Back     alignment and function desciption
 Score =  440 bits (1132), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 256/631 (40%), Positives = 350/631 (55%), Gaps = 60/631 (9%)

Query: 82  SHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVVRVEPDKQVVALADAYFFPPFQP 141
           SHPLDPLS  EI+ AVA ++     P   +S RF+ V   EP K  +             
Sbjct: 14  SHPLDPLSRVEIARAVAILKEG---PAAAESFRFISVELREPSKDDL------------- 57

Query: 142 SLIPRTKGGPIIPTKLPPRRARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVISSK 201
                 + G  +      R A  V+ ++    +   VV+L             G V S K
Sbjct: 58  ------RAGVAVA-----READAVLVDRAQARSFEAVVDLEA-----------GTVDSWK 95

Query: 202 VVPD-VQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHSDADAPS 260
           ++ + +QPP    E+AECE   +  P    A+ KRG+ ++DLV  +PW VGY  + D   
Sbjct: 96  LLAENIQPPFMLDEFAECEDACRKDPEVIAALAKRGLTNLDLVCFEPWSVGYFGE-DNEG 154

Query: 261 RRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPA--DPLR 318
           RRL + L+F R E+D   ++ YA P+E   V  D+    V+  ED + + +P A  + L 
Sbjct: 155 RRLMRALVFVRDEAD---DSPYAHPIENFIVFYDLNAGKVVRLEDDQAIPVPSARGNYLP 211

Query: 319 NYTAGETRGGVDRSDIKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAY 378
            Y       G  R+D+KPL I QPEG SF V G+ V W  W+FR+GFTPREGL+++ + +
Sbjct: 212 KYV------GEARTDLKPLNITQPEGASFTVTGNHVTWADWSFRVGFTPREGLVLHQLKF 265

Query: 379 VDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYI 438
            D    R PV +R S  EMVVPYGD      +KNAFD+GE  +G  A+SL  GCDCLG I
Sbjct: 266 KDQGVDR-PVINRASLSEMVVPYGDTAPVQAKKNAFDSGEYNIGNMANSLTLGCDCLGEI 324

Query: 439 KYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVAN 498
           KYFD H  +  G   TIEN +C+HEED  ILWKH D+R G AE RRSR+L +SFI TVAN
Sbjct: 325 KYFDGHSVDSHGNPWTIENAICMHEEDDSILWKHFDFREGTAETRRSRKLVISFIATVAN 384

Query: 499 YEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYG-TIIAPGLYAPVHQHFFVARM 557
           YEYAF+WH + DG IE  VK TGILS     PGE   YG ++   GLYAP+HQH F  RM
Sbjct: 385 YEYAFYWHLFLDGSIEFLVKATGILSTAGQLPGEKNPYGQSLNNDGLYAPIHQHMFNVRM 444

Query: 558 DMAVDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHW 617
           D  +D       N V E++++  E   +N    AF A + LL++E +A+R  N    R W
Sbjct: 445 DFELDG----VKNAVYEVDMEYPE---HNPTGTAFMAVDRLLETEQKAIRKTNEAKHRFW 497

Query: 618 IIRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGG 677
            I N  + N   +   Y+L+P +     A  +A V +RA F ++NLWVT Y   E +  G
Sbjct: 498 KIANHESKNLVNEPVAYRLIPTNGIQLAARDDAYVSKRAQFARNNLWVTAYDRTERFAAG 557

Query: 678 EFPNQNPRVGEGLATWVEQNRSLEETDIVLW 708
           E+PNQ     +GL  W +++R++ +TD+V+W
Sbjct: 558 EYPNQATGADDGLHIWTQKDRNIVDTDLVVW 588
The exact function of maoXI is not known.
Arthrobacter sp. (strain P1) (taxid: 47915)
EC: 1EC: .EC: 4EC: .EC: 3EC: .EC: 2EC: 1
>sp|Q07123|AMO2_ARTS1 Copper methylamine oxidase OS=Arthrobacter sp. (strain P1) GN=maoII PE=1 SV=1 Back     alignment and function description
>sp|Q59118|AMOH_ARTGO Histamine oxidase OS=Arthrobacter globiformis PE=1 SV=3 Back     alignment and function description
>sp|P46881|PAOX_ARTGO Phenylethylamine oxidase OS=Arthrobacter globiformis PE=1 SV=1 Back     alignment and function description
>sp|Q9P7F2|CAO1_SCHPO Copper amine oxidase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cao1 PE=1 SV=1 Back     alignment and function description
>sp|P12807|AMO_PICAN Peroxisomal primary amine oxidase OS=Pichia angusta GN=AMO PE=1 SV=1 Back     alignment and function description
>sp|Q12556|AMO1_ASPNG Copper amine oxidase 1 OS=Aspergillus niger GN=AO-I PE=1 SV=2 Back     alignment and function description
>sp|O42890|CAO2_SCHPO Copper amine oxidase-like protein cao2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cao2 PE=3 SV=1 Back     alignment and function description
>sp|P49250|AMO_ENTAE Primary amine oxidase OS=Enterobacter aerogenes GN=maoA PE=1 SV=1 Back     alignment and function description
>sp|P80695|AMO_KLEOK Primary amine oxidase OS=Klebsiella oxytoca (strain ATCC 8724 / DSM 4798 / JCM 20051 / NBRC 3318 / NRRL B-199 / KCTC 1686) GN=maoA PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query716
359495915774 PREDICTED: copper methylamine oxidase-li 0.984 0.910 0.885 0.0
255574009795 copper amine oxidase, putative [Ricinus 0.990 0.891 0.873 0.0
356501642760 PREDICTED: copper methylamine oxidase-li 0.935 0.881 0.900 0.0
255540539797 copper amine oxidase, putative [Ricinus 0.977 0.878 0.826 0.0
356566002764 PREDICTED: primary amine oxidase-like [G 0.976 0.914 0.864 0.0
449440642794 PREDICTED: copper methylamine oxidase-li 0.986 0.889 0.819 0.0
449477446791 PREDICTED: copper methylamine oxidase-li 0.986 0.892 0.819 0.0
224107787700 predicted protein [Populus trichocarpa] 0.886 0.907 0.919 0.0
297733721 1372 unnamed protein product [Vitis vinifera] 0.977 0.510 0.809 0.0
225456916791 PREDICTED: copper methylamine oxidase-li 0.979 0.886 0.819 0.0
>gi|359495915|ref|XP_002273532.2| PREDICTED: copper methylamine oxidase-like [Vitis vinifera] gi|296083412|emb|CBI23365.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1300 bits (3365), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 632/714 (88%), Positives = 671/714 (93%), Gaps = 9/714 (1%)

Query: 1   MATTQEKTTPTCCINNSSKPS----ATEPVKDWKVSGSDPSLDPVRKRDSVTTLIRPVES 56
           MA   EK T TCCI ++ KP+    A+  ++DW V+GS PS D + KR +V TLIR V+S
Sbjct: 1   MAAATEKAT-TCCIEDA-KPAPVRKASNVLQDWSVAGSAPSEDQISKRATVATLIRSVDS 58

Query: 57  LPDPPPPPNTISSTKGIPMMVRAQTSHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFV 116
           LP P   P   ++TKGIP+M+RAQTSHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFV
Sbjct: 59  LPQPAANP---TATKGIPIMLRAQTSHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFV 115

Query: 117 EVVRVEPDKQVVALADAYFFPPFQPSLIPRTKGGPIIPTKLPPRRARLVVYNKRSNETSI 176
           EVV VEP+K VVALADAYFFPPFQPSL+PRTKGGP+IP+KLPPR+ARLVVYNKRSNETSI
Sbjct: 116 EVVLVEPEKHVVALADAYFFPPFQPSLLPRTKGGPVIPSKLPPRQARLVVYNKRSNETSI 175

Query: 177 WVVELSEVHAATRGGHHRGKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRG 236
           W+VELSEVHAATRGGHHRGKVISSKVV DVQPPMDAVEYAECEAVVKDFPPFREAMKKRG
Sbjct: 176 WIVELSEVHAATRGGHHRGKVISSKVVADVQPPMDAVEYAECEAVVKDFPPFREAMKKRG 235

Query: 237 IEDMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQ 296
           IEDMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCP+ENGYARPVEGI+VLVDMQ
Sbjct: 236 IEDMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPMENGYARPVEGIYVLVDMQ 295

Query: 297 NMVVIEFEDRKLVHLPPADPLRNYTAGETRGGVDRSDIKPLQIVQPEGPSFRVNGHFVEW 356
           NMVV+EFEDRKLV LPPADPLRNYT GETRGGVDRSD+KPLQI+QPEGPSFRVNG+FVEW
Sbjct: 296 NMVVVEFEDRKLVPLPPADPLRNYTPGETRGGVDRSDVKPLQIIQPEGPSFRVNGYFVEW 355

Query: 357 QKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDA 416
           QKWNFRIGFTPREGL+IYSVAY+DGSRGRR VAHRLSFVEMVVPYGDPNDPHYRKNAFDA
Sbjct: 356 QKWNFRIGFTPREGLVIYSVAYIDGSRGRRSVAHRLSFVEMVVPYGDPNDPHYRKNAFDA 415

Query: 417 GEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWR 476
           GEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNF GG++TIENCVCLHEEDHG+LWKHQDWR
Sbjct: 416 GEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFTGGIETIENCVCLHEEDHGMLWKHQDWR 475

Query: 477 TGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKY 536
           TGLAEVRRSRRL+VSF+CTVANYEY FFWHFYQDGKIEAEVKLTGILSLGALQPGE+RKY
Sbjct: 476 TGLAEVRRSRRLTVSFVCTVANYEYGFFWHFYQDGKIEAEVKLTGILSLGALQPGEIRKY 535

Query: 537 GTIIAPGLYAPVHQHFFVARMDMAVDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEE 596
           GT IAPGLYAPVHQHFFVARMDMAVDCKPGE  NQVVE+NVKVEEPGKNNVHNNAFYAEE
Sbjct: 536 GTTIAPGLYAPVHQHFFVARMDMAVDCKPGETFNQVVEVNVKVEEPGKNNVHNNAFYAEE 595

Query: 597 ELLKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKVLRRA 656
           +LL+SE+QAMRDCNPL+ARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAK LRRA
Sbjct: 596 KLLRSEMQAMRDCNPLSARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKFLRRA 655

Query: 657 AFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLWLV 710
           AFLKHNLWVTPYA DEMYPGGEFPNQNPRVGEGLATWV QNRSLEETDIVLW V
Sbjct: 656 AFLKHNLWVTPYARDEMYPGGEFPNQNPRVGEGLATWVNQNRSLEETDIVLWYV 709

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255574009|ref|XP_002527922.1| copper amine oxidase, putative [Ricinus communis] gi|223532697|gb|EEF34479.1| copper amine oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356501642|ref|XP_003519633.1| PREDICTED: copper methylamine oxidase-like [Glycine max] Back     alignment and taxonomy information
>gi|255540539|ref|XP_002511334.1| copper amine oxidase, putative [Ricinus communis] gi|223550449|gb|EEF51936.1| copper amine oxidase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356566002|ref|XP_003551224.1| PREDICTED: primary amine oxidase-like [Glycine max] Back     alignment and taxonomy information
>gi|449440642|ref|XP_004138093.1| PREDICTED: copper methylamine oxidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|449477446|ref|XP_004155025.1| PREDICTED: copper methylamine oxidase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|224107787|ref|XP_002314600.1| predicted protein [Populus trichocarpa] gi|222863640|gb|EEF00771.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297733721|emb|CBI14968.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225456916|ref|XP_002277961.1| PREDICTED: copper methylamine oxidase-like [Vitis vinifera] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query716
TAIR|locus:2041589776 AT2G42490 [Arabidopsis thalian 0.984 0.908 0.790 1.50000009901e-317
UNIPROTKB|Q59118684 Q59118 "Histamine oxidase" [Ar 0.684 0.716 0.410 8.6e-100
ASPGD|ASPL0000068564683 AN7641 [Emericella nidulans (t 0.703 0.737 0.379 3.8e-91
POMBASE|SPAC2E1P3.04712 cao1 "copper amine oxidase Cao 0.705 0.709 0.356 1.9e-85
UNIPROTKB|G4NJD1704 MGG_15019 "Amine oxidase" [Mag 0.694 0.705 0.370 4.5e-84
ASPGD|ASPL0000028453668 AN5690 [Emericella nidulans (t 0.691 0.741 0.370 3.6e-82
ASPGD|ASPL0000029984666 AN8454 [Emericella nidulans (t 0.694 0.746 0.362 2.2e-80
ASPGD|ASPL0000045279682 AN1586 [Emericella nidulans (t 0.649 0.681 0.365 9.5e-78
ASPGD|ASPL0000050933674 AN2532 [Emericella nidulans (t 0.653 0.694 0.377 1e-77
CGD|CAL0001538709 AMO1 [Candida albicans (taxid: 0.699 0.706 0.330 1.2e-75
TAIR|locus:2041589 AT2G42490 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3045 (1077.0 bits), Expect = 1.5e-317, P = 1.5e-317
 Identities = 563/712 (79%), Positives = 618/712 (86%)

Query:     1 MATTQEKTTPTCCINNSS--KPSATEPVKDWKVSGSDPSLDPVRKRDSVTTLIRPVESLX 58
             MA+  +KT+  C  +  S   P       D     SD   D    + S+ ++IRPV+S  
Sbjct:     1 MASASKKTS-ACPHHGGSLPPPKLVSAAPDTVAVWSDAD-DQRASKVSLESVIRPVDSFP 58

Query:    59 XXXXXXNTISSTKGIPMMVRAQTSHPLDPLSAAEISXXXXXXXXXXXXPEVRDSMRFVEV 118
                       + KGI +M R +T HPLDPLSAAEIS            PEVRD MRF+EV
Sbjct:    59 DNTAKK---PANKGISVMPRTETKHPLDPLSAAEISVAVATVRAAGANPEVRDGMRFIEV 115

Query:   119 VRVEPDKQVVALADAYFFPPFQPSLIPRTKGGPIIPTKLPPRRARLVVYNKRSNETSIWV 178
               VEPDKQVVALADAYFFPPFQPSL+PRTK GP+IP KLPPRRARLVVYN++SNETS+W+
Sbjct:   116 ASVEPDKQVVALADAYFFPPFQPSLLPRTKSGPVIPMKLPPRRARLVVYNQKSNETSVWI 175

Query:   179 VELSEVHAATRGGHHRGKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIE 238
             V LSEVHA TRGGHHRG+V+SS+V+PDVQPPMDA EYAECEA+VKDFPPF EAMK+RGIE
Sbjct:   176 VALSEVHAVTRGGHHRGRVVSSQVIPDVQPPMDAAEYAECEAIVKDFPPFIEAMKRRGIE 235

Query:   239 DMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNM 298
             DMDLVMVDPWCVGYHS+ADAPSRRLAKPLI+CRT+SD P+ENGYARPVEGI+VLVDMQNM
Sbjct:   236 DMDLVMVDPWCVGYHSEADAPSRRLAKPLIYCRTDSDSPMENGYARPVEGIYVLVDMQNM 295

Query:   299 VVIEFEDRKLVHLPPADPLRNYTAGETRGGVDRSDIKPLQIVQPEGPSFRVNGHFVEWQK 358
             VVIEFEDRK V LPP DPLRNYT GE+RGGVDRSD+KPLQI+QPEGPSFRV G+FVEWQK
Sbjct:   296 VVIEFEDRKFVPLPPPDPLRNYTPGESRGGVDRSDVKPLQIIQPEGPSFRVRGYFVEWQK 355

Query:   359 WNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGE 418
             WNFRIGFTPREGL+I+SVAYVDGSRGRRPVAHRLSFVEMVVPYGDPN+PHYRKNAFDAGE
Sbjct:   356 WNFRIGFTPREGLVIHSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNEPHYRKNAFDAGE 415

Query:   419 DGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTG 478
             DGLGKNAHSLKKGCDCLG IKYFDAHFTNF GGV+TIENCVCLHEEDHGILWKHQDWRTG
Sbjct:   416 DGLGKNAHSLKKGCDCLGSIKYFDAHFTNFTGGVETIENCVCLHEEDHGILWKHQDWRTG 475

Query:   479 LAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGT 538
             LAEVRRSRRL+VSF+CTVANYEY F+WHFYQDGKIEAEVKLTGILSLGALQPGE RKYGT
Sbjct:   476 LAEVRRSRRLTVSFLCTVANYEYGFYWHFYQDGKIEAEVKLTGILSLGALQPGETRKYGT 535

Query:   539 IIAPGLYAPVHQHFFVARMDMAVDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEEEL 598
              IAPGLYAPVHQHFF+ARMDM+VDCKP EA NQVVE+NV+V+E G+NNVHNNAFYAEE+L
Sbjct:   536 TIAPGLYAPVHQHFFIARMDMSVDCKPAEAFNQVVEVNVRVDERGENNVHNNAFYAEEKL 595

Query:   599 LKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKVLRRAAF 658
             LKSE  AMRDC+PL+ARHWI+RNTRTVNRTGQLTGYKLVPGSNCLPLA  EAK LRRAAF
Sbjct:   596 LKSEAVAMRDCDPLSARHWIVRNTRTVNRTGQLTGYKLVPGSNCLPLARPEAKFLRRAAF 655

Query:   659 LKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLWLV 710
             LKHNLWVT YA DE +PGGEFPNQNPR GEGLATWV+QNRSLEE+D+VLW V
Sbjct:   656 LKHNLWVTRYAPDEKFPGGEFPNQNPRAGEGLATWVKQNRSLEESDVVLWYV 707
GO:0005507 "copper ion binding" evidence=IEA;ISS
GO:0008131 "primary amine oxidase activity" evidence=IEA
GO:0009308 "amine metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0048038 "quinone binding" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
GO:0005777 "peroxisome" evidence=IDA
UNIPROTKB|Q59118 Q59118 "Histamine oxidase" [Arthrobacter globiformis (taxid:1665)] Back     alignment and assigned GO terms
ASPGD|ASPL0000068564 AN7641 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
POMBASE|SPAC2E1P3.04 cao1 "copper amine oxidase Cao1" [Schizosaccharomyces pombe (taxid:4896)] Back     alignment and assigned GO terms
UNIPROTKB|G4NJD1 MGG_15019 "Amine oxidase" [Magnaporthe oryzae 70-15 (taxid:242507)] Back     alignment and assigned GO terms
ASPGD|ASPL0000028453 AN5690 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
ASPGD|ASPL0000029984 AN8454 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
ASPGD|ASPL0000045279 AN1586 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
ASPGD|ASPL0000050933 AN2532 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
CGD|CAL0001538 AMO1 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer1.4.3.210.824
3rd Layer1.4.3LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query716
PRK11504647 PRK11504, tynA, tyramine oxidase; Provisional 0.0
COG3733654 COG3733, TynA, Cu2+-containing amine oxidase [Seco 0.0
pfam01179411 pfam01179, Cu_amine_oxid, Copper amine oxidase, en 0.0
PRK14696721 PRK14696, tynA, tyramine oxidase; Provisional 9e-73
PLN02566646 PLN02566, PLN02566, amine oxidase (copper-containi 3e-68
pfam02728101 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, 6e-35
pfam0272786 pfam02727, Cu_amine_oxidN2, Copper amine oxidase, 1e-05
>gnl|CDD|236919 PRK11504, tynA, tyramine oxidase; Provisional Back     alignment and domain information 
 Score =  787 bits (2035), Expect = 0.0
 Identities = 314/630 (49%), Positives = 402/630 (63%), Gaps = 48/630 (7%)

Query: 79  AQTSHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVVRVEPDKQVVALADAYFFPP 138
           A  SHPLDPL+AAEI  AVA +RA G    + +S RFV +   EP K  V          
Sbjct: 10  AAVSHPLDPLTAAEIEAAVAILRAEG---LLGESTRFVSIELAEPPKAEVL--------A 58

Query: 139 FQPSLIPRTKGGPIIPTKLPPRRARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVI 198
           F P       G PI       RRA +V+Y++ + +T   VV L+            G+V+
Sbjct: 59  FDP-------GDPI------DRRAFVVLYDRATGKTYEAVVSLTA-----------GEVV 94

Query: 199 SSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDMDLVMVDPWCVGYHSDADA 258
           S + +P VQPP+   E+ ECE VV+  P ++ A+ KRGI D DLVMVDPW  GY  + + 
Sbjct: 95  SWEEIPGVQPPILLEEFEECEEVVRADPRWQAALAKRGITDFDLVMVDPWSAGYFGEPEE 154

Query: 259 PSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPADPLR 318
             RRLA+ L F R +   P +NGYARP+EG+  +VD+  M V+  ED  +V +P  D   
Sbjct: 155 RGRRLARGLAFVRAD---PGDNGYARPIEGLVAVVDLNTMEVLRVEDHGVVPIPAED--G 209

Query: 319 NYTAGETRGGVDRSDIKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAY 378
           NY          R+D+KPL+I QPEGPSF V+G+ VEWQKW+FR+GF PREGL+++ V+Y
Sbjct: 210 NYDPEFI--PPLRTDLKPLEITQPEGPSFTVDGNEVEWQKWSFRVGFNPREGLVLHQVSY 267

Query: 379 VDGSRGRRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYI 438
            DG R  RP+ +R S  EMVVPYGDP+  HY KNAFDAGE GLG+ A+SL+ GCDCLG I
Sbjct: 268 DDGGR-ERPILYRASLSEMVVPYGDPSPTHYWKNAFDAGEYGLGRLANSLELGCDCLGEI 326

Query: 439 KYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVAN 498
           +YFDA   +  G   TI+N +C+HEED+GILWKH D+RTG AEVRRSRRL +SF  TV N
Sbjct: 327 RYFDAVLADSDGEPYTIKNAICMHEEDYGILWKHTDFRTGSAEVRRSRRLVISFFATVGN 386

Query: 499 YEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMD 558
           Y+Y F+W+FYQDG IE EVKLTGI+   A+ PGE   YGT++APGLYAP HQHFF AR+D
Sbjct: 387 YDYGFYWYFYQDGTIEFEVKLTGIVFTAAVPPGETPPYGTLVAPGLYAPNHQHFFNARLD 446

Query: 559 MAVDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWI 618
           M VD   G   N V E+N      G +N H NAFY  E LL++E +A RD +P T R+W 
Sbjct: 447 MDVD---GPG-NSVYEVNSVPVPMGPDNPHGNAFYTRETLLETESEAARDADPSTGRYWK 502

Query: 619 IRNTRTVNRTGQLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGE 678
           I N    NR G+   YKLVPG N   LA   + + +RA F  H+LWVTPY  DE Y  G+
Sbjct: 503 IVNPNKKNRLGEPVAYKLVPGGNPPLLADPGSSIRQRAGFATHHLWVTPYDPDERYAAGD 562

Query: 679 FPNQNPRVGEGLATWVEQNRSLEETDIVLW 708
           +PNQ+   G+GL  ++  +RS+E TD+VLW
Sbjct: 563 YPNQSAG-GDGLPAYIAADRSIENTDVVLW 591

Length = 647
>gnl|CDD|226256 COG3733, TynA, Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|216347 pfam01179, Cu_amine_oxid, Copper amine oxidase, enzyme domain Back     alignment and domain information
>gnl|CDD|184793 PRK14696, tynA, tyramine oxidase; Provisional Back     alignment and domain information
>gnl|CDD|215306 PLN02566, PLN02566, amine oxidase (copper-containing) Back     alignment and domain information
>gnl|CDD|202361 pfam02728, Cu_amine_oxidN3, Copper amine oxidase, N3 domain Back     alignment and domain information
>gnl|CDD|145726 pfam02727, Cu_amine_oxidN2, Copper amine oxidase, N2 domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 716
PRK11504647 tynA tyramine oxidase; Provisional 100.0
PRK14696721 tynA tyramine oxidase; Provisional 100.0
COG3733654 TynA Cu2+-containing amine oxidase [Secondary meta 100.0
PLN02566646 amine oxidase (copper-containing) 100.0
KOG1186670 consensus Copper amine oxidase [Secondary metaboli 100.0
PF01179413 Cu_amine_oxid: Copper amine oxidase, enzyme domain 100.0
PF02728101 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; 99.9
PF0272786 Cu_amine_oxidN2: Copper amine oxidase, N2 domain; 99.66
>PRK11504 tynA tyramine oxidase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=1e-176  Score=1493.88  Aligned_cols=588  Identities=53%  Similarity=0.907  Sum_probs=556.1

Q ss_pred             CCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEEEEecCCChhhhhccccccCCCCCCCccccCCCCCCCCCCCCCc
Q 005050           81 TSHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVVRVEPDKQVVALADAYFFPPFQPSLIPRTKGGPIIPTKLPPR  160 (716)
Q Consensus        81 ~~HPLDpLs~~EI~~a~~~v~~~~~~~~~~~~~~F~~i~L~EP~K~~v~~~~~~~~p~~~~~ll~~~~~~~~~p~~~P~R  160 (716)
                      ..|||||||++||++|++|||++..   .++.++|++|+|.||+|++|+.        |      +. +.      +++|
T Consensus        12 ~~HPLdpLt~~Ei~~a~~iv~~~~~---~~~~~~F~~i~L~EP~K~~v~~--------~------~~-g~------~~~R   67 (647)
T PRK11504         12 VSHPLDPLTAAEIEAAVAILRAEGL---LGESTRFVSIELAEPPKAEVLA--------F------DP-GD------PIDR   67 (647)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHhccc---cCCceEEEEeeccCCCHHHHHh--------h------hc-CC------CCCc
Confidence            4699999999999999999999763   2358999999999999999973        2      11 22      2379


Q ss_pred             eEEEEEEECCCCcEEEEEEeCccccccccCCCccceEEEeeecCCCCCCCCHHHHHHHHHHHhcChhHHHHHHHcCCCCC
Q 005050          161 RARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIEDM  240 (716)
Q Consensus       161 ~A~vv~~~~~~~~~~e~vV~L~~~~~~~~~g~~~~~v~~~~~l~~~~pp~~~~E~~~~e~~~~~~p~~~ea~~~~gi~d~  240 (716)
                      +|+|++++..++.++|++|+|+           +++|++|+.++++||+++.+|+.+||++|++||.|+++|+||||+++
T Consensus        68 ~a~v~~~~~~~~~~~e~vVdL~-----------~~~V~~~~~~~~~~p~~~~~e~~~~e~~~~~dp~~~~ai~~rgl~~~  136 (647)
T PRK11504         68 RAFVVLYDRATGKTYEAVVSLT-----------AGEVVSWEEIPGVQPPILLEEFEECEEVVRADPRWQAALAKRGITDF  136 (647)
T ss_pred             EEEEEEEECCCCcEEEEEEECC-----------CCEEEEEEECCCccCCcCHHHHHHHHHHHhcCHHHHHHHHHcCCCCc
Confidence            9999999998889999999998           58999999999999999999999999999999999999999999999


Q ss_pred             CeEEEecccccccCCCCCCCCceEEEEEEEecCCCCCCCCccCCCCCCeEEEEecCCcEEEEEecCceecCCCCCCCCCC
Q 005050          241 DLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKLVHLPPADPLRNY  320 (716)
Q Consensus       241 ~~v~~dpw~~G~~~~~~~~~~Rl~~~l~f~r~~~~~~~~n~Ya~Pl~gl~~~vD~~~~kvi~~~d~~~~p~p~~~~~~~y  320 (716)
                      ++|+||||++|+++..++.++||+|++||+|.   ++++|+||||||||.++||++++||++|+|.+.+|+|+..  +||
T Consensus       137 ~~V~~dpw~~G~~~~~~~~~~Rl~~~~~~~r~---~~~~n~Ya~Pi~G~~~vvDl~~~~vv~i~d~g~~p~p~~~--~~Y  211 (647)
T PRK11504        137 DLVMVDPWSAGYFGEPEERGRRLARGLAFVRA---DPGDNGYARPIEGLVAVVDLNTMEVLRVEDHGVVPIPAED--GNY  211 (647)
T ss_pred             ceEEEcCccccccCCCCcCCceEEEEEEEEec---CCCccccccccCceEEEEECCCCEEEEEecCCCCCCCCCC--CCC
Confidence            99999999999988765557999999999996   4578999999999999999999999999998877777665  699


Q ss_pred             CCCccCCCCCCCCCCCceecCCCCCeeEEcceeecccCeEEEEEecCCcceEEEEEEEecCCCCcccEEEEeeeeeEEee
Q 005050          321 TAGETRGGVDRSDIKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVP  400 (716)
Q Consensus       321 ~~~~~~~~~~r~dlkPl~i~QPeG~sF~V~g~~V~Wq~W~f~vgf~~reGlvL~dV~y~d~g~g~R~I~YrlSl~Em~Vp  400 (716)
                      .++.+. + .|+|+|||+|+||||+||+|+|++|+||||+||||||+|||||||||+|+|+|+ .||||||+|||||+||
T Consensus       212 ~~~~~~-~-~r~dlkPl~i~QPeG~sF~v~g~~V~W~~W~f~vgf~~reGlvL~dv~y~d~g~-~R~v~YrlslsEm~VP  288 (647)
T PRK11504        212 DPEFIP-P-LRTDLKPLEITQPEGPSFTVDGNEVEWQKWSFRVGFNPREGLVLHQVSYDDGGR-ERPILYRASLSEMVVP  288 (647)
T ss_pred             ChhHcc-c-cccCCCCcceeCCCCCcEEEcCCEEEECCcEEEEecCCCCceEEEEEEEcCCCC-cceEEEEeeeeeeeee
Confidence            988765 4 599999999999999999999999999999999999999999999999999776 4889999999999999


Q ss_pred             cCCCCCccccceeeecCCCCCccCCCCCcCCCCCCCCcEEeeeeeecCCCceEEeeceEEEeeeeCCcccccccccCCce
Q 005050          401 YGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLA  480 (716)
Q Consensus       401 Ygdp~~p~~~k~afD~GeyG~G~~a~~L~~GcDCpg~i~YlD~~~~~~~G~p~~~~naICihE~D~GilwkH~d~r~g~~  480 (716)
                      ||||+++|++|+|||+||||+|.+||+|++||||||+|+|||+++.+++|+|++++|||||||+|.|+||||+|||++.+
T Consensus       289 Ygdp~p~~~~k~~fD~GeyG~G~~an~L~lGcDCpg~i~Y~D~~~~~~~G~p~~~~naICihE~D~GilwkHt~~r~~~~  368 (647)
T PRK11504        289 YGDPSPTHYWKNAFDAGEYGLGRLANSLELGCDCLGEIRYFDAVLADSDGEPYTIKNAICMHEEDYGILWKHTDFRTGSA  368 (647)
T ss_pred             cCCCCcchhhceeeeccccCCcccccccccCCCCCCCCEEcceEEecCCCCeEEecCEEEEeeecCCeeeeeeccCCCcE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeecceEEEEEeeeccccceEEEEEEccCCeEEEEEeEeEEEeeeecCCCCcCcccceecCCCccccceeeEEEEeeec
Q 005050          481 EVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDMA  560 (716)
Q Consensus       481 ~v~r~r~LVvr~I~TVgNYDYi~~w~F~~DGtIe~ev~aTGil~t~~~~~~~~~~yGt~V~p~~~a~~HqH~f~~RlD~d  560 (716)
                      +++|+|+||||+|+|||||||||+|+|||||+||+||+|||||+++++.++++.+||++|+|+++|++||||||||||||
T Consensus       369 ~v~r~r~LVvr~I~TVgNYdYi~~w~F~qdG~Ie~eV~aTGil~t~~~~~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~d  448 (647)
T PRK11504        369 EVRRSRRLVISFFATVGNYDYGFYWYFYQDGTIEFEVKLTGIVFTAAVPPGETPPYGTLVAPGLYAPNHQHFFNARLDMD  448 (647)
T ss_pred             EEEeccEEEEEEEEecccccEEEEEEEecCceEEEEEEeeeEEEeeeeCCCccCCCcceecCCcccccceEEEEEEEccc
Confidence            99999999999999999999999999999999999999999999999977777889999999999999999999999999


Q ss_pred             ccCCCCCCccEEEEEeeeecCCCCCCCCCcceEEEEEEEechhhhhhcCCCCCCeEEEEEeCCCcCCCCCceeEEEecCC
Q 005050          561 VDCKPGEAHNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGS  640 (716)
Q Consensus       561 VdG~~~g~~Nsv~~~~~~~~~~~~~np~gn~~~~~~t~l~tE~~a~~~~~~~~~R~w~ivN~~~~N~~G~p~gYkl~p~~  640 (716)
                      |||    .+|||++.+++..+.++.||+||+|++++|++++|.+|+++++++++|+|+|+|++++|++|+|+||||+|++
T Consensus       449 IDG----~~Nsv~~~d~~~~p~~~~np~g~~~~~~~t~l~tE~~a~~~~~~~~~R~~~ivN~~~~N~~G~pvgYkl~p~~  524 (647)
T PRK11504        449 VDG----PGNSVYEVNSVPVPMGPDNPHGNAFYTRETLLETESEAARDADPSTGRYWKIVNPNKKNRLGEPVAYKLVPGG  524 (647)
T ss_pred             ccC----CCceEEEEEeEecCCCCCCccceEEEEEEEEecchhhhhhccCCCCccEEEEECCCCcCCCCCeeeEEEccCC
Confidence            998    6899999999998888899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCchHHhhhhhccccceEEeecCCCCcCCCCCCCCCCCCCCCChhhhhccCCcccCCCeEEEEeeccccC
Q 005050          641 NCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLWLVEILYRI  716 (716)
Q Consensus       641 ~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~asg~y~nq~~~~~~gl~~~~~~~e~I~~eDiV~W~t~G~~HI  716 (716)
                      ++.+|+.++|+..+||+||+||||||+|+|+|+||+|+|+||+.+ ++||++|+++||+|+|||||||||||+|||
T Consensus       525 ~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~y~~Qs~~-~~gl~~~~~~~~~i~~~DiVlW~t~G~~Hv  599 (647)
T PRK11504        525 NPPLLADPGSSIRQRAGFATHHLWVTPYDPDERYAAGDYPNQSAG-GDGLPAYIAADRSIENTDVVLWYTFGITHV  599 (647)
T ss_pred             CccccCCCCchhhhcchhhhCcEEEeccCCCccccCCCCcccCCC-CCCHHHHhcCCCccccCceEEEEecCcccC
Confidence            999999999999999999999999999999999999999999976 579999999999999999999999999997

>PRK14696 tynA tyramine oxidase; Provisional Back     alignment and domain information
>COG3733 TynA Cu2+-containing amine oxidase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PLN02566 amine oxidase (copper-containing) Back     alignment and domain information
>KOG1186 consensus Copper amine oxidase [Secondary metabolites biosynthesis, transport and catabolism] Back     alignment and domain information
>PF01179 Cu_amine_oxid: Copper amine oxidase, enzyme domain; InterPro: IPR015798 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF02728 Cu_amine_oxidN3: Copper amine oxidase, N3 domain; InterPro: IPR015802 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information
>PF02727 Cu_amine_oxidN2: Copper amine oxidase, N2 domain; InterPro: IPR015800 Amine oxidases (AO) are enzymes that catalyse the oxidation of a wide range of biogenic amines including many neurotransmitters, histamine and xenobiotic amines Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query716
1ivu_A638 Crystal Structure Of Copper Amine Oxidase From Arth 2e-93
2e2u_A628 Substrate Schiff-Base Analogue Of Copper Amine Oxid 2e-92
1ui8_A638 Site-directed Mutagenesis Of His592 Involved In Bin 2e-92
1ivv_A638 Crystal Structure Of Copper Amine Oxidase From Arth 2e-92
1sih_A646 Agao In Covalent Complex With The Inhibitor Moba (" 2e-92
1ui7_A638 Site-Directed Mutagenesis Of His433 Involved In Bin 3e-92
2yx9_A638 Crystal Structure Of D298k Copper Amine Oxidase Fro 1e-91
2cwt_A638 Catalytic Base Deletion In Copper Amine Oxidase Fro 2e-91
1ekm_A656 Crystal Structure At 2.5 A Resolution Of Zinc-Subst 3e-81
3sx1_A692 Hansenula Polymorpha Copper Amine Oxidase-1 In Its 1e-80
1a2v_A655 Copper Amine Oxidase From Hansenula Polymorpha Leng 3e-80
3n9h_A692 Crystal Structural Of Mutant Y305a In The Copper Am 1e-78
3nbb_B663 Crystal Structure Of Mutant Y305f Expressed In E. C 1e-78
3nbj_B657 Crystal Structure Of Y305f Mutant Of The Copper Ami 2e-78
2oov_C660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 3e-78
2oov_A660 Crystal Structure Of Hansenula Polymorpha Amine Oxi 3e-78
3loy_A633 Crystal Structure Of A Copper-Containing Benzylamin 5e-70
2wgq_A727 Zinc Substituted E Coli Copper Amine Oxidase, A Mod 1e-55
1oac_A727 Crystal Structure Of A Quinoenzyme: Copper Amine Ox 9e-55
1jrq_A727 X-Ray Structure Analysis Of The Role Of The Conserv 2e-54
1qaf_A721 The Active Site Base Controls Cofactor Reactivity I 4e-54
1qal_A721 The Active Site Base Controls Cofactor Reactivity I 4e-54
1qak_A722 The Active Site Base Controls Cofactor Reactivity I 1e-53
1ksi_A642 Crystal Structure Of A Eukaryotic (Pea Seedling) Co 1e-52
1w2z_A649 Psao And Xenon Length = 649 1e-52
1n9e_A787 Crystal Structure Of Pichia Pastoris Lysyl Oxidase 8e-21
1rky_A747 Pplo + Xe Length = 747 5e-20
3pgb_A797 Crystal Structure Of Aspergillus Nidulans Amine Oxi 8e-18
1tu5_A746 Crystal Structure Of Bovine Plasma Copper-Containin 6e-16
1us1_A763 Crystal Structure Of Human Vascular Adhesion Protei 2e-15
2c10_A735 The Structure Of A Truncated, Soluble Version Of Se 2e-15
3ala_A748 Crystal Structure Of Vascular Adhesion Protein-1 In 2e-15
3hi7_A731 Crystal Structure Of Human Diamine Oxidase Length = 8e-13
>pdb|1IVU|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Initial Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure 
Iteration: 1

 Score =  339 bits (870), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 193/480 (40%), Positives = 276/480 (57%), Gaps = 15/480 (3%)
Query: 230 EAMKKRGIEDMDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGI 289
           +A+  R + D+  V V P   G    A+   RR+ + L F +   D P ++ +A PV+G+
Sbjct: 120 KALAARNL-DVSKVRVAPLSAGVFEYAEERGRRILRGLAFVQ---DFPEDSAWAHPVDGL 175
Query: 290 HVLVDMQNMVVIEFEDRKLVHLPPADPLRNYTAGETRGGVDRSDIKPLQIVQPEGPSFRV 349
              VD+ +  V    D  +  +P      NYT  E  G + R+  KP+ I QPEGPSF V
Sbjct: 176 VAYVDVVSKEVTRVIDTGVFPVPAEHG--NYTDPELTGPL-RTTQKPISITQPEGPSFTV 232
Query: 350 NG-HFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPH 408
            G + +EW+KW+  +GF  REG++++++A+ DG R  RP+ +R S  EMVVPYGDP+   
Sbjct: 233 TGGNHIEWEKWSLDVGFDVREGVVLHNIAFRDGDR-LRPIINRASIAEMVVPYGDPSPIR 291
Query: 409 YRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGI 468
             +N FD GE  +G+ A+SL+ GCDCLG I Y     ++  G    I N +C+HEED GI
Sbjct: 292 SWQNYFDTGEYLVGQYANSLELGCDCLGDITYLSPVISDAFGNPREIRNGICMHEEDWGI 351
Query: 469 LWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGAL 528
           L KH D  +G+   RR+RR+ +SF  T+ NY+Y F+W+ Y DG IE E K TG++   A 
Sbjct: 352 LAKHSDLWSGINYTRRNRRMVISFFTTIGNYDYGFYWYLYLDGTIEFEAKATGVVFTSAF 411
Query: 529 QPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEAHNQVVEMNVKVEEPGKNNVH 588
             G      + +APGL AP HQH F AR+DMA+D       N+V E +V  +  G  N  
Sbjct: 412 PEGGSDNI-SQLAPGLGAPFHQHIFSARLDMAIDG----FTNRVEEEDVVRQTMGPGNER 466
Query: 589 NNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGS 648
            NAF  +  +L  E +A+R+ +  T R WII N  + NR  +  GYKL   +    LA  
Sbjct: 467 GNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADP 526
Query: 649 EAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLW 708
            + + RRAAF   +LWVT YA DE YP G+F NQ+   G GL +++ Q+R ++  DIV+W
Sbjct: 527 GSSIARRAAFATKDLWVTRYADDERYPTGDFVNQHSG-GAGLPSYIAQDRDIDGQDIVVW 585
>pdb|2E2U|A Chain A, Substrate Schiff-Base Analogue Of Copper Amine Oxidase From Arthrobacter Globiformis Formed With 4-Hydroxybenzylhydrazine Length = 628 Back     alignment and structure
>pdb|1UI8|A Chain A, Site-directed Mutagenesis Of His592 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|1IVV|A Chain A, Crystal Structure Of Copper Amine Oxidase From Arthrobacter Globiformis: Early Intermediate In Topaquinone Biogenesis Length = 638 Back     alignment and structure
>pdb|1SIH|A Chain A, Agao In Covalent Complex With The Inhibitor Moba ("4-(4- Methylphenoxy)-2-Butyn-1-Amine") Length = 646 Back     alignment and structure
>pdb|1UI7|A Chain A, Site-Directed Mutagenesis Of His433 Involved In Binding Of Copper Ion In Arthrobacter Globiformis Amine Oxidase Length = 638 Back     alignment and structure
>pdb|2YX9|A Chain A, Crystal Structure Of D298k Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|2CWT|A Chain A, Catalytic Base Deletion In Copper Amine Oxidase From Arthrobacter Globiformis Length = 638 Back     alignment and structure
>pdb|1EKM|A Chain A, Crystal Structure At 2.5 A Resolution Of Zinc-Substituted Copper Amine Oxidase Of Hansenula Polymorpha Expressed In Escherichia Coli Length = 656 Back     alignment and structure
>pdb|3SX1|A Chain A, Hansenula Polymorpha Copper Amine Oxidase-1 In Its Apo Form Length = 692 Back     alignment and structure
>pdb|1A2V|A Chain A, Copper Amine Oxidase From Hansenula Polymorpha Length = 655 Back     alignment and structure
>pdb|3N9H|A Chain A, Crystal Structural Of Mutant Y305a In The Copper Amine Oxidase From Hansenula Polymorpha Length = 692 Back     alignment and structure
>pdb|2OOV|C Chain C, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|2OOV|A Chain A, Crystal Structure Of Hansenula Polymorpha Amine Oxidase To 1.7 Angstroms Length = 660 Back     alignment and structure
>pdb|3LOY|A Chain A, Crystal Structure Of A Copper-Containing Benzylamine Oxidase From Hansenula Polymorpha Length = 633 Back     alignment and structure
>pdb|2WGQ|A Chain A, Zinc Substituted E Coli Copper Amine Oxidase, A Model For The Precursor For 2,4,5-Trihydroxyphenylalaninequinone Formation Length = 727 Back     alignment and structure
>pdb|1OAC|A Chain A, Crystal Structure Of A Quinoenzyme: Copper Amine Oxidase Of Escherichia Coli At 2 Angstroems Resolution Length = 727 Back     alignment and structure
>pdb|1JRQ|A Chain A, X-Ray Structure Analysis Of The Role Of The Conserved Tyrosine-369 In Active Site Of E. Coli Amine Oxidase Length = 727 Back     alignment and structure
>pdb|1QAF|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1QAL|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-Ray Crystallographic Studies With Mutational Variants Length = 721 Back     alignment and structure
>pdb|1QAK|A Chain A, The Active Site Base Controls Cofactor Reactivity In Escherichia Coli Amine Oxidase : X-ray Crystallographic Studies With Mutational Variants Length = 722 Back     alignment and structure
>pdb|1KSI|A Chain A, Crystal Structure Of A Eukaryotic (Pea Seedling) Copper-Containing Amine Oxidase At 2.2a Resolution Length = 642 Back     alignment and structure
>pdb|1W2Z|A Chain A, Psao And Xenon Length = 649 Back     alignment and structure
>pdb|1N9E|A Chain A, Crystal Structure Of Pichia Pastoris Lysyl Oxidase Pplo Length = 787 Back     alignment and structure
>pdb|1RKY|A Chain A, Pplo + Xe Length = 747 Back     alignment and structure
>pdb|3PGB|A Chain A, Crystal Structure Of Aspergillus Nidulans Amine Oxidase Length = 797 Back     alignment and structure
>pdb|1TU5|A Chain A, Crystal Structure Of Bovine Plasma Copper-Containing Amine Oxidase Length = 746 Back     alignment and structure
>pdb|1US1|A Chain A, Crystal Structure Of Human Vascular Adhesion Protein-1 Length = 763 Back     alignment and structure
>pdb|2C10|A Chain A, The Structure Of A Truncated, Soluble Version Of Semicarbazide-Sensitive Amine Oxidase Length = 735 Back     alignment and structure
>pdb|3ALA|A Chain A, Crystal Structure Of Vascular Adhesion Protein-1 In Space Group C2 Length = 748 Back     alignment and structure
>pdb|3HI7|A Chain A, Crystal Structure Of Human Diamine Oxidase Length = 731 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query716
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 0.0
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 0.0
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 1e-180
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 1e-179
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 1e-173
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 1e-161
3pgb_A797 Putative uncharacterized protein; oxidoreductase, 1e-156
1w7c_A747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 1e-155
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 1e-145
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-07
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Length = 692 Back     alignment and structure
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Length = 727 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query716
3sxx_A692 Peroxisomal primary amine oxidase; oxidoreductase, 100.0
3loy_A633 Copper amine oxidase; TPQ, oxidoreductase; HET: TP 100.0
1w6g_A646 Phenylethylamine oxidase; copper containing, metal 100.0
1ksi_A642 Copper amine oxidase; PEA seedling, oxidoreductase 100.0
1spu_A727 Copper amine oxidase; oxidoreductase, TPQ, peripla 100.0
1w7c_A747 Lysyl oxidase; AMNE oxidase, copper, oxidoreductas 100.0
1tu5_A746 Copper amine oxidase, liver isozyme; oxidoreductas 100.0
3hi7_A731 Amiloride-sensitive amine oxidase; oxidoreductase, 100.0
3pgb_A797 Putative uncharacterized protein; oxidoreductase, 100.0
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A* Back     alignment and structure
Probab=100.00  E-value=4.6e-175  Score=1487.28  Aligned_cols=591  Identities=34%  Similarity=0.604  Sum_probs=548.9

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCceEEEEEEecCCChhhhhccccccCCCCCCCccccCCCCCCCCCCCCC
Q 005050           80 QTSHPLDPLSAAEISVAVATVRAAGATPEVRDSMRFVEVVRVEPDKQVVALADAYFFPPFQPSLIPRTKGGPIIPTKLPP  159 (716)
Q Consensus        80 ~~~HPLDpLs~~EI~~a~~~v~~~~~~~~~~~~~~F~~i~L~EP~K~~v~~~~~~~~p~~~~~ll~~~~~~~~~p~~~P~  159 (716)
                      ...|||||||++||++|++||+++..    ++.++|+.|+|.||+|++|+.   |         +  +..+     ++|+
T Consensus        20 ~~~HPLDpLs~~Ei~~a~~iv~~~~~----~~~~~F~~i~L~EP~K~~v~~---~---------~--~~~~-----~~p~   76 (692)
T 3sxx_A           20 RPAHPLDPLSTAEIKAATNTVKSYFA----GKKISFNTVTLREPARKAYIQ---W---------K--EQGG-----PLPP   76 (692)
T ss_dssp             CCSSTTSCCCHHHHHHHHHHHHHHTT----TSCEEEEEEEEECCCHHHHHH---H---------H--HSCC-----CCCC
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHhhCC----CCCcEEEEEECCCCCHHHHHH---H---------H--hcCC-----CCCC
Confidence            35799999999999999999998764    357999999999999999984   2         1  2212     3678


Q ss_pred             ceEEEEEEECCCCcEEEEEEeCccccccccCCCccceEEEeeecCCCCCCCCHHHHHHHHHHHhcChhHHHHHHHcCCCC
Q 005050          160 RRARLVVYNKRSNETSIWVVELSEVHAATRGGHHRGKVISSKVVPDVQPPMDAVEYAECEAVVKDFPPFREAMKKRGIED  239 (716)
Q Consensus       160 R~A~vv~~~~~~~~~~e~vV~L~~~~~~~~~g~~~~~v~~~~~l~~~~pp~~~~E~~~~e~~~~~~p~~~ea~~~~gi~d  239 (716)
                      |+|+|++++.+++.++|++|+|+           .++|++|+.++++||+|+.|||.+||++|++||+|+++|++|||++
T Consensus        77 R~a~v~~~~~~~~~~~e~vVdl~-----------~~~v~~~~~~~~~~p~~~~ee~~~~e~~~~~~p~~~~a~~~rgl~~  145 (692)
T 3sxx_A           77 RLAYYVILEAGKPGVKEGLVDLA-----------SLSVIETRALETVQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPA  145 (692)
T ss_dssp             CEEEEEEEETTCSSEEEEEEETT-----------TTEEEEEEEETTCCCCCCHHHHHTHHHHHHHCHHHHHHHHHTTCCG
T ss_pred             eEEEEEEEECCCCCEEEEEEECC-----------CCeEEEEEECCCCcCCcCHHHHHHHHHHHHhCHHHHHHHHHcCCCc
Confidence            99999999988889999999998           5899999999999999999999999999999999999999999964


Q ss_pred             --CCeEEEecccccccCCCCCCCCceEEEEEEEecCCCCCCCCccCCCCCCeEEEEecCCcEEEEEecCce-ecCCCCCC
Q 005050          240 --MDLVMVDPWCVGYHSDADAPSRRLAKPLIFCRTESDCPIENGYARPVEGIHVLVDMQNMVVIEFEDRKL-VHLPPADP  316 (716)
Q Consensus       240 --~~~v~~dpw~~G~~~~~~~~~~Rl~~~l~f~r~~~~~~~~n~Ya~Pl~gl~~~vD~~~~kvi~~~d~~~-~p~p~~~~  316 (716)
                        +++|+||||++|+++.. +.++||+|+|||+|..   +++|+|||||| |+++||++++||++|++... .|+|+.. 
T Consensus       146 ~~~~~V~~dpw~~G~~~~~-~~~~Rl~~~~~y~r~~---~~~N~Ya~Pl~-~~~vvD~~~~~vi~id~~~~~~p~~~~~-  219 (692)
T 3sxx_A          146 NEMHKVYCDPWTIGYDERW-GTGKRLQQALVYYRSD---EDDSQYSHPLD-FCPIVDTEEKKVIFIDIPNRRRKVSKHK-  219 (692)
T ss_dssp             GGGGGEEEEEEECCCCTTT-TTSSCEEEEEEEECSS---TTSCGGGCBCS-CEEEEETTTTEEEEEECCSSCCCCCCSC-
T ss_pred             cccceEEEccccccccCCC-CCCceEEEEEEEEecC---CCCCcccccce-eEEEEECCCCEEEEEecCCCCCCCCCCC-
Confidence              55699999999997754 4589999999999973   46899999999 99999999999999988755 4555433 


Q ss_pred             CCCCCCCccC--CCCCCC-CCCCceecCCCCCeeEEcceeecccCeEEEEEecCCcceEEEEEEEecCCCCcccEEEEee
Q 005050          317 LRNYTAGETR--GGVDRS-DIKPLQIVQPEGPSFRVNGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLS  393 (716)
Q Consensus       317 ~~~y~~~~~~--~~~~r~-dlkPl~i~QPeG~sF~V~g~~V~Wq~W~f~vgf~~reGlvL~dV~y~d~g~g~R~I~YrlS  393 (716)
                      ..||.++.+.  ++ .|+ |+|||+|+||||+||+|+||+|+||||+||||||+||||+||||+|+|+|+ .||||||+|
T Consensus       220 ~~~Y~p~~~~~~~~-~r~~d~kP~~i~QPeG~sF~v~g~~V~W~~W~F~vgf~~reGlvL~dV~y~~~g~-~R~V~YrlS  297 (692)
T 3sxx_A          220 HANFYPKHMIEKVG-AMRPEAPPINVTQPEGVSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYNDHGN-VRPIFHRIS  297 (692)
T ss_dssp             CCCCSHHHHHHHHS-SCCCCCCCCEEECTTCCSCEEETTEEEETTEEEEEEEETTTEEEEEEEEEEETTE-EEEEEEEEE
T ss_pred             CCCCChHHccccCC-CCCCCCCCceecCCCCCcEEEcCCeEEecCcEEEEecCCCCceEEEEEEEcCCCc-ceeeeeeee
Confidence            3799887654  34 488 999999999999999999999999999999999999999999999999765 689999999


Q ss_pred             eeeEEeecCCCCCccccceeeecCCCCCccCCCCCcCCCCCCCCcEEeeeeeecCCCceEEeeceEEEeeeeCCcccccc
Q 005050          394 FVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQ  473 (716)
Q Consensus       394 l~Em~VpYgdp~~p~~~k~afD~GeyG~G~~a~~L~~GcDCpg~i~YlD~~~~~~~G~p~~~~naICihE~D~GilwkH~  473 (716)
                      ||||+||||||++||+||+|||+||||+|.+||+|++||||||+|+|||+++.+.+|+|++++|||||||+|+|+||||+
T Consensus       298 l~Em~VPYgdp~~p~~~k~afD~GeyG~G~~an~L~lGcDCpg~i~YlD~~~~~~~G~p~~~~NaICihE~d~Gil~kHt  377 (692)
T 3sxx_A          298 LSEMIVPYGSPEFPHQRKHALDIGEYGAGYMTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEEDDGLLFKHS  377 (692)
T ss_dssp             EEEEEEEBCCCSTTGGGCEECHHHHTCTTTTBCCCTTTTTSCSSCEEEEEEEECTTSCEEEEEEEEEEEEEEEEEEEEEE
T ss_pred             hheeEEecCCCCchhhhheeeeccccCCCccccccccCCCCCCCcEEeeeEEecCCCCEEEecceEEEeeccCCceEEee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCC--ceeeeecceEEEEEeeeccccceEEEEEEccCCeEEEEEeEeEEEeeeecCCCC-cCcccceecCCCccccce
Q 005050          474 DWRTG--LAEVRRSRRLSVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGE-VRKYGTIIAPGLYAPVHQ  550 (716)
Q Consensus       474 d~r~g--~~~v~r~r~LVvr~I~TVgNYDYi~~w~F~~DGtIe~ev~aTGil~t~~~~~~~-~~~yGt~V~p~~~a~~Hq  550 (716)
                      |||++  .++|+|+|+||||+|+|||||||||||+|||||+||+||+|||||+++++.+++ ..+|||+|+|+++|++||
T Consensus       378 ~~r~~~~~~~v~r~r~LVvr~i~TVgNYDYif~w~F~qdG~Ie~ev~aTGil~t~~~~~~~~~~~yGt~V~~~v~a~~Hq  457 (692)
T 3sxx_A          378 DFRDNFATSLVTRATKLVVSQIFTAANYEYCLYWVFMQDGAIRLDIRLTGILNTYILGDDEEAGPWGTRVYPNVNAHNHQ  457 (692)
T ss_dssp             CGGGTTCSEEEEEEEEEEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEECCCCEECCTTCCCTTTEEEEETTEEEECEE
T ss_pred             eccCCCceeeEEeccEEEEEEeeeccceeEEEEEEEecCCeEEEEEEEEEEEEeeeeCCCcccCCCcceecCCcccccee
Confidence            99998  899999999999999999999999999999999999999999999999998876 689999999999999999


Q ss_pred             eeEEEEeeecccCCCCCCccEEEEEeeeecCC---CCCCCCCcceEEEEEEEechhhhhhcCCCCCCeEEEEEeCCCcCC
Q 005050          551 HFFVARMDMAVDCKPGEAHNQVVEMNVKVEEP---GKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNR  627 (716)
Q Consensus       551 H~f~~RlD~dVdG~~~g~~Nsv~~~~~~~~~~---~~~np~gn~~~~~~t~l~tE~~a~~~~~~~~~R~w~ivN~~~~N~  627 (716)
                      |+|||||||||||    .+|||++++++.++.   ++.|||||+|++++|.++||++|+++++++++|+|+|+|++++|+
T Consensus       458 H~f~~RlD~dIdG----~~Nsv~~~d~~~~~~~~~~~~np~g~~~~~~~t~~~tE~ea~~~~~~~~~R~~~i~N~~~~N~  533 (692)
T 3sxx_A          458 HLFSLRIDPRIDG----DGNSAAACDAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNP  533 (692)
T ss_dssp             EEEEEEEEECTTS----SCBEEEEEEEEECSSCTTBTTBTTSCCEEEEEEECCBHHHHCBCCCGGGTCEEEEECTTCCCT
T ss_pred             EEEEEEeccccCC----CCceEEEEEeEEccCCCCCCCCCCcceeEEEEEEccchhhhhhccCCCCCcEEEEeCCCCcCC
Confidence            9999999999998    799999999998775   468999999999999999999999999999999999999999999


Q ss_pred             C-CCceeEEEecCCCCCCCCCCchHHhhhhhccccceEEeecCCCCcCCCCCCCCCCCCC-CCChhhhh-ccCCcccCCC
Q 005050          628 T-GQLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRV-GEGLATWV-EQNRSLEETD  704 (716)
Q Consensus       628 ~-G~p~gYkl~p~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~asg~y~nq~~~~-~~gl~~~~-~~~e~I~~eD  704 (716)
                      + |+|+||||+|++++.+|++++|+..+||+||+||||||||+|+|+||+|+|+||+++. .+||++|+ ++||+|+|||
T Consensus       534 ~sG~pvgYkL~p~~~~~ll~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~y~nQs~g~p~~gl~~w~~~~~e~I~n~D  613 (692)
T 3sxx_A          534 YSGKPPSYKLVSTQCPPLLAKEGSLVAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWIGDGSENIDNTD  613 (692)
T ss_dssp             TTCSCCEEEEECCCCCCCCSCTTSHHHHHCGGGGSSEEEEECCTTCCCTTCSSCTTCCSCSSCHHHHHHTTSCSBCSSBC
T ss_pred             CCCccceEEEecCCCCcccCCCCchhhhhchhcccceEEecCCCCccCCCCCCccCCCCCCCCChHHHhhcCCceeecCc
Confidence            8 9999999999999988999999999999999999999999999999999999999762 27999999 8999999999


Q ss_pred             eEEEEeeccccC
Q 005050          705 IVLWLVEILYRI  716 (716)
Q Consensus       705 iV~W~t~G~~HI  716 (716)
                      ||||||||||||
T Consensus       614 iV~W~t~G~~Hi  625 (692)
T 3sxx_A          614 ILFFHTFGITHF  625 (692)
T ss_dssp             EEEEEEEEEEEC
T ss_pred             eEEEEecCcccC
Confidence            999999999997
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 716
d1w6ga1417 b.30.2.1 (A:212-628) Copper amine oxidase, domain 1e-157
d2oqea1436 b.30.2.1 (A:237-672) Copper amine oxidase, domain 1e-154
d1d6za1424 b.30.2.1 (A:301-724) Copper amine oxidase, domain 1e-152
d1w2za1441 b.30.2.1 (A:207-647) Copper amine oxidase, domain 1e-152
d1w7ca1460 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 1e-138
d1d6za3115 d.17.2.1 (A:186-300) Copper amine oxidase, domains 8e-32
d1w6ga3115 d.17.2.1 (A:97-211) Copper amine oxidase, domains 8e-30
d1w2za3108 d.17.2.1 (A:99-206) Copper amine oxidase, domains 3e-28
d2oqea3121 d.17.2.1 (A:116-236) Copper amine oxidase, domains 7e-25
d2oqea298 d.17.2.1 (A:18-115) Copper amine oxidase, domains 2e-20
d1d6za295 d.17.2.1 (A:91-185) Copper amine oxidase, domains 8e-16
d1w6ga288 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 1e-12
d1w2za293 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 6e-12
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Length = 417 Back     information, alignment and structure

class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Arthrobacter globiformis [TaxId: 1665]

 Score =  459 bits (1183), Expect = e-157
 Identities = 165/379 (43%), Positives = 230/379 (60%), Gaps = 8/379 (2%)

Query: 331 RSDIKPLQIVQPEGPSFRV-NGHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVA 389
           R+  KP+ I QPEGPSF V  G+ +EW+KW+  +GF  REG++++++A+ DG R  RP+ 
Sbjct: 3   RTTQKPISITQPEGPSFTVTGGNHIEWEKWSLDVGFDVREGVVLHNIAFRDGDR-LRPII 61

Query: 390 HRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFA 449
           +R S  EMVVPYGDP+     +N FD GE  +G+ A+SL+ GCDCLG I Y     ++  
Sbjct: 62  NRASIAEMVVPYGDPSPIRSWQNYFDTGEYLVGQYANSLELGCDCLGDITYLSPVISDAF 121

Query: 450 GGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRLSVSFICTVANYEYAFFWHFYQ 509
           G    I N +C+HEED GIL KH D  +G+   RR+RR+ +SF  T+ NY+Y F+W+ Y 
Sbjct: 122 GNPREIRNGICMHEEDWGILAKHSDLWSGINYTRRNRRMVISFFTTIGNYDYGFYWYLYL 181

Query: 510 DGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEAH 569
           DG IE E K TG++   A   G      + +APGL AP HQH F AR+DMA+D       
Sbjct: 182 DGTIEFEAKATGVVFTSAFPEGGSD-NISQLAPGLGAPFHQHIFSARLDMAIDGFT---- 236

Query: 570 NQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTG 629
           N+V E +V  +  G  N   NAF  +  +L  E +A+R+ +  T R WII N  + NR  
Sbjct: 237 NRVEEEDVVRQTMGPGNERGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLN 296

Query: 630 QLTGYKLVPGSNCLPLAGSEAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEG 689
           +  GYKL   +    LA   + + RRAAF   +LWVT YA DE YP G+F NQ+   G G
Sbjct: 297 EPVGYKLHAHNQPTLLADPGSSIARRAAFATKDLWVTRYADDERYPTGDFVNQHSG-GAG 355

Query: 690 LATWVEQNRSLEETDIVLW 708
           L +++ Q+R ++  DIV+W
Sbjct: 356 LPSYIAQDRDIDGQDIVVW 374
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 436 Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Length = 424 Back     information, alignment and structure
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 441 Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Length = 460 Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 115 Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 115 Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 108 Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 121 Back     information, alignment and structure
>d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Length = 98 Back     information, alignment and structure
>d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Length = 95 Back     information, alignment and structure
>d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Length = 88 Back     information, alignment and structure
>d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Length = 93 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query716
d1w6ga1417 Copper amine oxidase, domain 3 {Arthrobacter globi 100.0
d2oqea1436 Copper amine oxidase, domain 3 {Yeast (Hansenula p 100.0
d1w2za1441 Copper amine oxidase, domain 3 {Pea seedling (Pisu 100.0
d1d6za1424 Copper amine oxidase, domain 3 {Escherichia coli [ 100.0
d1w7ca1460 Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastor 100.0
d1w6ga3115 Copper amine oxidase, domains 1 and 2 {Arthrobacte 99.95
d1d6za3115 Copper amine oxidase, domains 1 and 2 {Escherichia 99.94
d1w2za3108 Copper amine oxidase, domains 1 and 2 {Pea seedlin 99.94
d2oqea3121 Copper amine oxidase, domains 1 and 2 {Yeast (Hans 99.93
d2oqea298 Copper amine oxidase, domains 1 and 2 {Yeast (Hans 99.84
d1d6za295 Copper amine oxidase, domains 1 and 2 {Escherichia 99.78
d1w6ga288 Copper amine oxidase, domains 1 and 2 {Arthrobacte 99.75
d1w2za293 Copper amine oxidase, domains 1 and 2 {Pea seedlin 99.74
d1w7ca2127 Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia 98.85
d1w7ca3146 Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia 88.67
>d1w6ga1 b.30.2.1 (A:212-628) Copper amine oxidase, domain 3 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
class: All beta proteins
fold: Supersandwich
superfamily: Amine oxidase catalytic domain
family: Amine oxidase catalytic domain
domain: Copper amine oxidase, domain 3
species: Arthrobacter globiformis [TaxId: 1665]

Probab=100.00  E-value=1.1e-128  Score=1059.39  Aligned_cols=380  Identities=44%  Similarity=0.775  Sum_probs=369.3

Q ss_pred             CCCCCCCceecCCCCCeeEEc-ceeecccCeEEEEEecCCcceEEEEEEEecCCCCcccEEEEeeeeeEEeecCCCCCcc
Q 005050          330 DRSDIKPLQIVQPEGPSFRVN-GHFVEWQKWNFRIGFTPREGLIIYSVAYVDGSRGRRPVAHRLSFVEMVVPYGDPNDPH  408 (716)
Q Consensus       330 ~r~dlkPl~i~QPeG~sF~V~-g~~V~Wq~W~f~vgf~~reGlvL~dV~y~d~g~g~R~I~YrlSl~Em~VpYgdp~~p~  408 (716)
                      .|+++||++|+||||+||+|+ ||+|+||+|+|||+|++|+||+||||+|+|++| .|+||||+|||||+||||||+++|
T Consensus         2 ~r~~~kp~~i~QP~G~~f~v~~g~~V~w~~W~f~~~f~~r~Gl~l~dv~~~~g~r-~r~i~Y~lsl~E~~vpY~~~~p~~   80 (417)
T d1w6ga1           2 LRTTQKPISITQPEGPSFTVTGGNHIEWEKWSLDVGFDVREGVVLHNIAFRDGDR-LRPIINRASIAEMVVPYGDPSPIR   80 (417)
T ss_dssp             CCCCCCCCCCCCTTCCSCEEETTTEEEETTEEEEEEEETTTEEEEEEEEEEETTE-EEEEEEEEEEEEEEEEBCCCCTTT
T ss_pred             CCCCCCCceeeCCCCCCEEECCCCEEEEcCCEEEEEeCCCcccEEEEEEEcCCCe-EeeEEEEecceeEEEECCCCCchh
Confidence            489999999999999999997 999999999999999999999999999998766 589999999999999999999999


Q ss_pred             ccceeeecCCCCCccCCCCCcCCCCCCCCcEEeeeeeecCCCceEEeeceEEEeeeeCCcccccccccCCceeeeecceE
Q 005050          409 YRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAHFTNFAGGVDTIENCVCLHEEDHGILWKHQDWRTGLAEVRRSRRL  488 (716)
Q Consensus       409 ~~k~afD~GeyG~G~~a~~L~~GcDCpg~i~YlD~~~~~~~G~p~~~~naICihE~D~GilwkH~d~r~g~~~v~r~r~L  488 (716)
                      ++|+|||+||||||.++++|++|||||++|+|||+++.+++|+|++++|||||||+|.|++|||++++++..+++|+++|
T Consensus        81 ~~~~~~D~ge~G~G~~a~~L~~G~DCp~~a~y~D~~~~~~~g~p~~~~naiCifE~d~G~~~rh~~~~~~~~~~~r~~~L  160 (417)
T d1w6ga1          81 SWQNYFDTGEYLVGQYANSLELGCDCLGDITYLSPVISDAFGNPREIRNGICMHEEDWGILAKHSDLWSGINYTRRNRRM  160 (417)
T ss_dssp             TTCEEECCCCCCGGGGBCCCCBTTTBCSSCEEECCEEECTTSCEEECTTCEEEEEEEEEEEEEEECTTTCCEEEEEEEEE
T ss_pred             hhceeEeccccchhhhccccccCCCCCccCeEeeEEEecCCCCEEeccceEEEeecCCCceEEEEEecCCceeEEeeeeE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeeeccccceEEEEEEccCCeEEEEEeEeEEEeeeecCCCCcCcccceecCCCccccceeeEEEEeeecccCCCCCC
Q 005050          489 SVSFICTVANYEYAFFWHFYQDGKIEAEVKLTGILSLGALQPGEVRKYGTIIAPGLYAPVHQHFFVARMDMAVDCKPGEA  568 (716)
Q Consensus       489 Vvr~I~TVgNYDYi~~w~F~~DGtIe~ev~aTGil~t~~~~~~~~~~yGt~V~p~~~a~~HqH~f~~RlD~dVdG~~~g~  568 (716)
                      |||+|+|||||||||||+|||||+||++|+|||||+++++.++ ...||++|+|+++|++|||+|||||||||||    +
T Consensus       161 Vvr~i~TvgNYdYi~~~~F~~dGsIe~~v~aTG~l~~~~~~~~-~~~~g~~v~~~~~g~~H~H~f~~RlD~dIdG----~  235 (417)
T d1w6ga1         161 VISFFTTIGNYDYGFYWYLYLDGTIEFEAKATGVVFTSAFPEG-GSDNISQLAPGLGAPFHQHIFSARLDMAIDG----F  235 (417)
T ss_dssp             EEEEEEEETTEEEEEEEEEETTSCEEEEEEEEECCCCEECCTT-CCSSEEEEETTEEEECEEEEEEEEEEECTTS----S
T ss_pred             EEEEEEEeeeeeEEEEEEEecCcEEEEEEEEEEEEEEeccCCC-CCCcccEeccCcccccccceeEEEeccccCC----C
Confidence            9999999999999999999999999999999999999998765 4579999999999999999999999999998    7


Q ss_pred             ccEEEEEeeeecCCCCCCCCCcceEEEEEEEechhhhhhcCCCCCCeEEEEEeCCCcCCCCCceeEEEecCCCCCCCCCC
Q 005050          569 HNQVVEMNVKVEEPGKNNVHNNAFYAEEELLKSELQAMRDCNPLTARHWIIRNTRTVNRTGQLTGYKLVPGSNCLPLAGS  648 (716)
Q Consensus       569 ~Nsv~~~~~~~~~~~~~np~gn~~~~~~t~l~tE~~a~~~~~~~~~R~w~ivN~~~~N~~G~p~gYkl~p~~~~~~l~~~  648 (716)
                      +|+|++++++..+.+..||+||+|+++++.+++|.+|.+++++.++|+|+|+|++|+|++|+|+||||+|++++.+|+.+
T Consensus       236 ~Nsv~~~~~~~~~~~~~~~~~~~~~~~~t~~~~E~~a~~~~~~~~~r~~~vvN~~k~N~~G~~~gYkl~p~~~~~~l~~~  315 (417)
T d1w6ga1         236 TNRVEEEDVVRQTMGPGNERGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADP  315 (417)
T ss_dssp             CBEEEEEEEEECCSBTTBTTSCCEEEEEEEECBGGGCEECCCGGGTCEEEEEEEEEECTTSCEEEEEEEECCCCCCCSCT
T ss_pred             CceEEEEeeEEecCCCccccccEEEEEEEEEEehhhhhhcccccCccEEEEECCCCcCCCCCcceEEEccCCCCcccCCC
Confidence            99999999999888889999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             chHHhhhhhccccceEEeecCCCCcCCCCCCCCCCCCCCCChhhhhccCCcccCCCeEEEEeeccccC
Q 005050          649 EAKVLRRAAFLKHNLWVTPYAHDEMYPGGEFPNQNPRVGEGLATWVEQNRSLEETDIVLWLVEILYRI  716 (716)
Q Consensus       649 ~s~~~~ra~fa~~~lwVT~y~d~E~~asg~y~nq~~~~~~gl~~~~~~~e~I~~eDiV~W~t~G~~HI  716 (716)
                      +|...+||+|++||||||||+|+|+||+|.|+||+.+ ++||++|+++||+|+|||||||||||+|||
T Consensus       316 ~s~~~~ra~fa~~~lwVT~y~d~E~~aag~y~nq~~~-~~~l~~~~~~~e~I~~~DiV~W~t~G~~H~  382 (417)
T d1w6ga1         316 GSSIARRAAFATKDLWVTRYADDERYPTGDFVNQHSG-GAGLPSYIAQDRDIDGQDIVVWHTFGLTHF  382 (417)
T ss_dssp             TSHHHHHTGGGGSSEEEEECCTTCCCTTCSCCBTCCS-SSSHHHHHTTCCBCTTBCEEEEEEEEEEEC
T ss_pred             CchhhhcchhhcccEEEecCCCccccCCCCCccCCCC-CCChhHhhcCCCcccCCcEEEEEeCCcccC
Confidence            9999999999999999999999999999999999975 579999999999999999999999999997
>d2oqea1 b.30.2.1 (A:237-672) Copper amine oxidase, domain 3 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1w2za1 b.30.2.1 (A:207-647) Copper amine oxidase, domain 3 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1d6za1 b.30.2.1 (A:301-724) Copper amine oxidase, domain 3 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w7ca1 b.30.2.1 (A:316-775) Lysyl oxidase PplO, domain 3 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure
>d1w6ga3 d.17.2.1 (A:97-211) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1d6za3 d.17.2.1 (A:186-300) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w2za3 d.17.2.1 (A:99-206) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d2oqea3 d.17.2.1 (A:116-236) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d2oqea2 d.17.2.1 (A:18-115) Copper amine oxidase, domains 1 and 2 {Yeast (Hansenula polymorpha) [TaxId: 4905]} Back     information, alignment and structure
>d1d6za2 d.17.2.1 (A:91-185) Copper amine oxidase, domains 1 and 2 {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1w6ga2 d.17.2.1 (A:9-96) Copper amine oxidase, domains 1 and 2 {Arthrobacter globiformis [TaxId: 1665]} Back     information, alignment and structure
>d1w2za2 d.17.2.1 (A:6-98) Copper amine oxidase, domains 1 and 2 {Pea seedling (Pisum sativum) [TaxId: 3888]} Back     information, alignment and structure
>d1w7ca2 d.17.2.1 (A:43-169) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure
>d1w7ca3 d.17.2.1 (A:170-315) Lysyl oxidase PplO, domains 1 and 2 {Yeast (Pichia pastoris) [TaxId: 4922]} Back     information, alignment and structure